BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019728
(336 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 349 bits (896), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/324 (52%), Positives = 230/324 (70%), Gaps = 6/324 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
+ + S+A T ++VAIKKI NAFD + +A+RTLRE+K+L+H +H+N+IAIKDI+RP
Sbjct: 67 YGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTV 126
Query: 73 KKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
F VY+V +LM++DLHQII S Q LT +H +YFLYQLLRGLKY+HSA V+HRDLKP
Sbjct: 127 PYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKP 186
Query: 133 SNLLLNASCDLKIGDFGLART--TSETD---FMTEYVVTRWYRAPELLLNCTEYTAAIDI 187
SNLL+N +C+LKIGDFG+AR TS + FMTEYV TRWYRAPEL+L+ EYT AID+
Sbjct: 187 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDL 246
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
WSVGCI GE++ R LFPGK+YVHQL+LI ++G+P A + + ++ R Y++ LP +
Sbjct: 247 WSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQ 306
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHF 307
+ T +P A+ LL +ML F+P+ RI+ ALRHP+L HD +DEP C PF F
Sbjct: 307 PVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDF 366
Query: 308 DFEHSSCTEDHIRELIWRESVKFN 331
F+ + T + I+E I E F+
Sbjct: 367 AFDREALTRERIKEAIVAEIEDFH 390
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 349 bits (895), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/324 (52%), Positives = 230/324 (70%), Gaps = 6/324 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
+ + S+A T ++VAIKKI NAFD + +A+RTLRE+K+L+H +H+N+IAIKDI+RP
Sbjct: 68 YGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTV 127
Query: 73 KKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
F VY+V +LM++DLHQII S Q LT +H +YFLYQLLRGLKY+HSA V+HRDLKP
Sbjct: 128 PYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKP 187
Query: 133 SNLLLNASCDLKIGDFGLART--TSETD---FMTEYVVTRWYRAPELLLNCTEYTAAIDI 187
SNLL+N +C+LKIGDFG+AR TS + FMTEYV TRWYRAPEL+L+ EYT AID+
Sbjct: 188 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDL 247
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
WSVGCI GE++ R LFPGK+YVHQL+LI ++G+P A + + ++ R Y++ LP +
Sbjct: 248 WSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQ 307
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHF 307
+ T +P A+ LL +ML F+P+ RI+ ALRHP+L HD +DEP C PF F
Sbjct: 308 PVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDF 367
Query: 308 DFEHSSCTEDHIRELIWRESVKFN 331
F+ + T + I+E I E F+
Sbjct: 368 AFDREALTRERIKEAIVAEIEDFH 391
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 333 bits (855), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 167/323 (51%), Positives = 225/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + S+A + + VAIKKI + F++ +RTLREI++L HENVI I+DI+R
Sbjct: 56 YGMVSSAYDHVRKTRVAIKKI-SPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRAST 114
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL+++++S QQL++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 115 LEAMRDVYIVQDLMETDLYKLLKS-QQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 173
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLL+N +CDLKI DFGLAR T F+TE V TRWYRAPE++LN YT +IDIWS
Sbjct: 174 NLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWS 233
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y++ LP K
Sbjct: 234 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKV 293
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+A FP S A+DLL++ML F+PNKRITVEEAL HPYL+ +D DEPV PF F
Sbjct: 294 AWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEPFTFAM 353
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI++E+ +F P
Sbjct: 354 ELDDLPKERLKELIFQETARFQP 376
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 333 bits (853), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 225/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 34 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 92
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 93 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 151
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 152 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 211
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP+ L + + AR Y+ LP K
Sbjct: 212 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKV 271
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 272 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 331
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 332 ELDDLPKEKLKELIFEETARFQP 354
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 332 bits (852), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 224/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 38 YGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 96
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 97 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 155
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 156 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 215
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 216 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 275
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 276 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 335
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 336 ELDDLPKEKLKELIFEETARFQP 358
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 332 bits (852), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 224/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 56 YGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 114
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 115 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 173
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 174 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 233
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 234 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 293
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 294 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 353
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 354 ELDDLPKEKLKELIFEETARFQP 376
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 332 bits (852), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 224/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 36 YGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 94
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 95 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 153
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 154 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 213
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 214 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 273
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 274 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 333
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 334 ELDDLPKEKLKELIFEETARFQP 356
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 332 bits (852), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 224/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 44 YGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 102
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 103 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 161
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 162 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 221
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 222 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 281
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 282 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 341
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 342 ELDDLPKEKLKELIFEETARFQP 364
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 332 bits (852), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 224/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 36 YGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 94
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 95 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 153
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 154 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 213
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 214 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 273
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 274 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 333
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 334 ELDDLPKEKLKELIFEETARFQP 356
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 332 bits (851), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 224/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 34 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 92
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 93 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 151
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 152 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 211
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 212 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 271
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 272 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 331
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 332 ELDDLPKEKLKELIFEETARFQP 354
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 332 bits (851), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 224/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 41 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 99
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 100 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 158
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 159 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 218
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 219 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 278
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 279 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 338
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 339 ELDDLPKEKLKELIFEETARFQP 361
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 332 bits (851), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 224/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 42 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 100
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 101 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 159
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 160 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 219
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 220 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 279
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 280 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 339
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 340 ELDDLPKEKLKELIFEETARFQP 362
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 332 bits (851), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 224/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 33 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 91
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 92 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 150
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 151 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 210
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 211 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 270
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 271 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 330
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 331 ELDDLPKEKLKELIFEETARFQP 353
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 332 bits (851), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 224/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 40 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 98
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 99 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 157
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 158 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 337
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 338 ELDDLPKEKLKELIFEETARFQP 360
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 331 bits (849), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 223/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 38 YGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPT 96
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 97 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 155
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 156 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 215
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 216 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 275
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL +D +DEP+ PF FD
Sbjct: 276 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEAPFKFDM 335
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 336 ELDDLPKEKLKELIFEETARFQP 358
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 331 bits (849), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 223/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 40 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 98
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL+++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 99 IEQMKDVYIVQDLMETDLYKLLKC-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 157
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 158 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 337
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 338 ELDDLPKEKLKELIFEETARFQP 360
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 331 bits (848), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 165/323 (51%), Positives = 224/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAI+KI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 40 YGMVCSAYDNLNKVRVAIRKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 98
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 99 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 157
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 158 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 337
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 338 ELDDLPKEKLKELIFEETARFQP 360
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 330 bits (845), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/323 (51%), Positives = 223/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 36 YGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 94
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 95 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 153
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN + DLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 154 NLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 213
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 214 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKV 273
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 274 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 333
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 334 ELDDLPKEKLKELIFEETARFQP 356
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 329 bits (843), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/323 (51%), Positives = 223/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 36 YGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 94
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 95 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 153
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN + DLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 154 NLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 213
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 214 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKV 273
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 274 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 333
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 334 ELDDLPKEKLKELIFEETARFQP 356
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 328 bits (841), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 165/323 (51%), Positives = 223/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 40 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPT 98
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 99 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 157
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN + DLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 158 NLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 337
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 338 ELDDLPKEKLKELIFEETARFQP 360
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 328 bits (841), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 165/323 (51%), Positives = 223/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 36 YGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 94
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 95 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 153
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN + DLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 154 NLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 213
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 214 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 273
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 274 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 333
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 334 ELDDLPKEKLKELIFEETARFQP 356
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 328 bits (841), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/323 (51%), Positives = 223/323 (69%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 40 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 98
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 99 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 157
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN + DLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 158 NLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 337
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 338 ELDDLPKEKLKELIFEETARFQP 360
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 327 bits (838), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 164/323 (50%), Positives = 222/323 (68%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 40 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 98
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 99 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 157
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+ E V TRWYRAPE++LN YT +IDIWS
Sbjct: 158 NLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 337
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 338 ELDDLPKEKLKELIFEETARFQP 360
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 327 bits (838), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 164/323 (50%), Positives = 222/323 (68%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 41 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 99
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 100 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 158
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN +CDLKI DFGLAR T F+ E V TRWYRAPE++LN YT +IDIWS
Sbjct: 159 NLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWS 218
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 219 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 278
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 279 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 338
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 339 ELDDLPKEKLKELIFEETARFQP 361
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/323 (51%), Positives = 221/323 (68%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 38 YGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPT 96
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVYIV +LM+TDL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 97 IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 155
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN + DLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 156 NLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 215
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + AR Y+ LP K
Sbjct: 216 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKV 275
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL +D +DEP+ PF FD
Sbjct: 276 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEAPFKFDM 335
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 336 ELDDLPKEKLKELIFEETARFQP 358
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 324 bits (831), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 163/323 (50%), Positives = 220/323 (68%), Gaps = 6/323 (1%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + +A ++ + VAIKKI + F++ +RTLREIK+L HEN+I I DIIR P
Sbjct: 56 YGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 114
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+ DVY+V LM DL++++++ Q L++DH YFLYQ+LRGLKY+HSA+VLHRDLKPS
Sbjct: 115 IEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 173
Query: 134 NLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLLN + DLKI DFGLAR T F+TEYV TRWYRAPE++LN YT +IDIWS
Sbjct: 174 NLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 233
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
VGCIL E+++ P+FPGK Y+ QL I ++GSP L + + AR Y+ LP K
Sbjct: 234 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 293
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDF 309
+ FPN S A+DLL+KML F+P+KRI VE+AL HPYL+ +D +DEP+ PF FD
Sbjct: 294 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDM 353
Query: 310 EHSSCTEDHIRELIWRESVKFNP 332
E ++ ++ELI+ E+ +F P
Sbjct: 354 ELDDLPKEKLKELIFEETARFQP 376
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 322 bits (826), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/339 (48%), Positives = 221/339 (65%), Gaps = 18/339 (5%)
Query: 4 KLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 63
+L+ + + + +A + T E VAIKKI FD + A RTLREIK+L+H +HEN+I
Sbjct: 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENII 72
Query: 64 AIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 123
I +I RP + FN+VYI+ ELM TDLH++I S Q L+DDH QYF+YQ LR +K +H +
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 124 SVLHRDLKPSNLLLNASCDLKIGDFGLART-----------TSETDFMTEYVVTRWYRAP 172
+V+HRDLKPSNLL+N++CDLK+ DFGLAR T + MTEYV TRWYRAP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 173 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP-DDASLGFL 231
E++L +Y+ A+D+WS GCIL E+ R P+FPG+DY HQL LI +IG+P D L +
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 232 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
S AR Y++ LP FP + +DLL++MLVFDP KRIT +EAL HPYLQ+
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
Query: 292 LHDLND----EPVCPRPFHFDFEHSSCTEDHIRELIWRE 326
HD ND EP+ P F FD + T +++LIW E
Sbjct: 312 YHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNE 350
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 319 bits (818), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/339 (48%), Positives = 220/339 (64%), Gaps = 18/339 (5%)
Query: 4 KLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 63
+L+ + + + +A + T E VAIKKI FD + A RTLREIK+L+H +HEN+I
Sbjct: 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENII 72
Query: 64 AIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 123
I +I RP + FN+VYI+ ELM TDLH++I S Q L+DDH QYF+YQ LR +K +H +
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 124 SVLHRDLKPSNLLLNASCDLKIGDFGLART-----------TSETDFMTEYVVTRWYRAP 172
+V+HRDLKPSNLL+N++CDLK+ DFGLAR T + MTE V TRWYRAP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 173 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP-DDASLGFL 231
E++L +Y+ A+D+WS GCIL E+ R P+FPG+DY HQL LI +IG+P D L +
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 232 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
S AR Y++ LP FP + +DLL++MLVFDP KRIT +EAL HPYLQ+
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
Query: 292 LHDLND----EPVCPRPFHFDFEHSSCTEDHIRELIWRE 326
HD ND EP+ P F FD + T +++LIW E
Sbjct: 312 YHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNE 350
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 319 bits (818), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/339 (48%), Positives = 220/339 (64%), Gaps = 18/339 (5%)
Query: 4 KLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 63
+L+ + + + +A + T E VAIKKI FD + A RTLREIK+L+H +HEN+I
Sbjct: 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENII 72
Query: 64 AIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 123
I +I RP + FN+VYI+ ELM TDLH++I S Q L+DDH QYF+YQ LR +K +H +
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 124 SVLHRDLKPSNLLLNASCDLKIGDFGLART-----------TSETDFMTEYVVTRWYRAP 172
+V+HRDLKPSNLL+N++CDLK+ DFGLAR T + M E+V TRWYRAP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAP 191
Query: 173 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP-DDASLGFL 231
E++L +Y+ A+D+WS GCIL E+ R P+FPG+DY HQL LI +IG+P D L +
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 232 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
S AR Y++ LP FP + +DLL++MLVFDP KRIT +EAL HPYLQ+
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
Query: 292 LHDLND----EPVCPRPFHFDFEHSSCTEDHIRELIWRE 326
HD ND EP+ P F FD + T +++LIW E
Sbjct: 312 YHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNE 350
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/317 (50%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV PF FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPFDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 59 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 118
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 119 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 177
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 178 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 236 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIG 295
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 296 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 354
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 355 EWKSLTYDEVISFVPPP 371
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 212/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 47 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 107 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T+ D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 166 NEDCELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 224 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 283
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 284 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 342
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 343 EWKSLTYDEVISFVPPP 359
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 46 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 105
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 106 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 165 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 223 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIG 282
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 283 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 341
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 342 EWKSLTYDEVISFVPPP 358
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 60 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 119
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 120 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 179 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 237 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIG 296
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 297 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 355
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 356 EWKSLTYDEVISFVPPP 372
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 50 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 109
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 110 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 168
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 169 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 226
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 227 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIG 286
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 287 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 345
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 346 EWKSLTYDEVISFVPPP 362
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 315 bits (807), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 36 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 96 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 155 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 213 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIG 272
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 273 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 331
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 332 EWKSLTYDEVISFVPPP 348
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 315 bits (807), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKX-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 315 bits (807), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 52 AAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 111
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 112 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 171 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 229 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 288
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 289 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 347
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 348 EWKSLTYDEVISFVPPP 364
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 51 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 110
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 111 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 169
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 170 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 228 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 287
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 288 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 346
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 347 EWKSLTYDEVISFVPPP 363
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 52 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 111
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 112 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 171 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 229 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 288
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 289 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 347
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 348 EWKSLTYDEVISFVPPP 364
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 46 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 105
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 106 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 165 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 223 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 282
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 283 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 341
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 342 EWKSLTYDEVISFVPPP 358
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 52 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 111
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 112 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 171 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 229 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 288
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 289 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 347
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 348 EWKSLTYDEVISFVPPP 364
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 47 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 107 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 166 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 224 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 283
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 284 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 342
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 343 EWKSLTYDEVISFVPPP 359
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 42 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 101
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 102 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 161 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 219 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 278
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 279 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 337
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 338 EWKSLTYDEVISFVPPP 354
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 45 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 104
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 105 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 164 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 222 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 281
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 282 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 340
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 341 EWKSLTYDEVISFVPPP 357
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 60 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 119
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 120 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 179 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 237 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 296
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 297 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 355
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 356 EWKSLTYDEVISFVPPP 372
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 45 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 104
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 105 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 164 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 222 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 281
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 282 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 340
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 341 EWKSLTYDEVISFVPPP 357
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 39 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 98
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 99 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 157
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 158 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 215
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 216 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 275
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 276 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 334
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 335 EWKSLTYDEVISFVPPP 351
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 314 bits (805), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 59 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 118
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 119 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 177
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 178 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 236 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 295
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 296 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 354
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 355 EWKSLTYDEVISFVPPP 371
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 42 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 101
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 102 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 161 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 219 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 278
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 279 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 337
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 338 EWKSLTYDEVISFVPPP 354
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 63 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 122
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 123 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 181
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 182 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 240 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 299
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 300 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 358
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 359 EWKSLTYDEVISFVPPP 375
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 42 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 101
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 102 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 161 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 219 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 278
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 279 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 337
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 338 EWKSLTYDEVISFVPPP 354
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 46 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 105
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 106 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 165 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 223 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 282
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 283 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 341
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 342 EWKSLTYDEVISFVPPP 358
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 36 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 96 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 155 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 213 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 272
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 273 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 331
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 332 EWKSLTYDEVISFVPPP 348
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 38 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 97
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 98 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 156
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 157 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 215 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 274
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 275 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 333
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 334 EWKSLTYDEVISFVPPP 350
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 37 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 96
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 97 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 156 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 214 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 273
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 274 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 332
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 333 EWKSLTYDEVISFVPPP 349
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 314 bits (804), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 37 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 96
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 97 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 156 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 214 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 273
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 274 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 332
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 333 EWKSLTYDEVISFVPPP 349
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 314 bits (804), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 47 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 107 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T+ D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 166 NEDCELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 224 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 283
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ E D
Sbjct: 284 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSLESRDLLID 342
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 343 EWKSLTYDEVISFVPPP 359
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 313 bits (803), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI D+GLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDYGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 313 bits (801), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 36 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ +LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 96 NDVYLVTHLMGADLNNIVKC-AKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 155 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 213 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIG 272
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 273 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 331
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 332 EWKSLTYDEVISFVPPP 348
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 313 bits (801), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPTDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 313 bits (801), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 63 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 122
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 123 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 181
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D M YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 182 NEDCELKILDFGLARHTD--DEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 240 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 299
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 300 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 358
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 359 EWKSLTYDEVISFVPPP 375
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 313 bits (801), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 211/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 47 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 107 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T+ D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 166 NEDCELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 224 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 283
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ E D
Sbjct: 284 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSSESRDLLID 342
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 343 EWKSLTYDEVISFVPPP 359
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 312 bits (800), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI FGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILGFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 312 bits (800), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D M +V TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 312 bits (799), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPQDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 312 bits (799), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 36 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 96 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D M +V TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 155 NEDCELKILDFGLARHTD--DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 213 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIG 272
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 273 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 331
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 332 EWKSLTYDEVISFVPPP 348
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 312 bits (799), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D M +V TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 312 bits (799), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPRDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 311 bits (798), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKX-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N +LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDXELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 311 bits (798), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DF LAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFYLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 311 bits (798), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI D GLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDAGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 311 bits (797), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI D GLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDGGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 311 bits (797), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 42 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 101
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 102 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N +LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 161 NEDSELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 219 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 278
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 279 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 337
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 338 EWKSLTYDEVISFVPPP 354
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 311 bits (797), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 46 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 105
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 106 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N +LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 165 NEDSELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 223 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 282
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 283 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 341
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 342 EWKSLTYDEVISFVPPP 358
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 311 bits (797), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D MT V TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDFGLARHTD--DEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 311 bits (796), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI D GLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDCELKILDRGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 311 bits (796), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 51 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 110
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 111 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 169
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N +LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 170 NEDXELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 228 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 287
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 288 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 346
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 347 EWKSLTYDEVISFVPPP 363
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 311 bits (796), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 45 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 104
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 105 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N +LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 164 NEDXELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 222 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 281
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 282 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 340
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 341 EWKSLTYDEVISFVPPP 357
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 310 bits (795), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 45 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 104
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 105 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N +LKI DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 164 NEDXELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 222 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 281
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 282 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 340
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 341 EWKSLTYDEVISFVPPP 357
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 310 bits (794), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 209/317 (65%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 60 AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 119
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 120 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR T D M V TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 179 NEDCELKILDFGLARHTD--DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 237 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIG 296
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ FE D
Sbjct: 297 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSFESRDLLID 355
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 356 EWKSLTYDEVISFVPPP 372
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 309 bits (792), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 209/317 (65%), Gaps = 5/317 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
AA +++T VA+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + + F
Sbjct: 40 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
NDVY+V LM DL+ I++S Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +
Sbjct: 100 NDVYLVTHLMGADLNNIVKS-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N +LKI DFGL R T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 159 NEDSELKILDFGLCRHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T LFPG D++ QL+LI L+G+P L + S++AR Y++ L + K FA F
Sbjct: 217 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ AVDLLEKMLV D +KRIT +AL H Y HD +DEPV P+ E D
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-DPYDQSLESRDLLID 335
Query: 318 HIRELIWRESVKFNPDP 334
+ L + E + F P P
Sbjct: 336 EWKSLTYDEVISFVPPP 352
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 305 bits (781), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/308 (49%), Positives = 202/308 (65%), Gaps = 5/308 (1%)
Query: 28 EVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYEL 86
++A+KK+ F +II A+RT RE++LL+HM+HENVI + D+ P + FNDVY+V L
Sbjct: 78 KIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHL 137
Query: 87 MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
M DL+ I++ Q+LTDDH Q+ +YQ+LRGLKY+HSA ++HRDLKPSNL +N C+LKI
Sbjct: 138 MGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL 196
Query: 147 DFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPG 206
DFGLAR T D MT YV TRWYRAPE++LN Y +DIWSVGCI+ E++T LFPG
Sbjct: 197 DFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPG 254
Query: 207 KDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLL 266
D+++QL+ I L G+P + + + S AR Y+ LP+ K+ FA F + AVDLL
Sbjct: 255 TDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLL 314
Query: 267 EKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRE 326
EKMLV D +KRIT EAL HPY HD +DEP P+ FE + + L + E
Sbjct: 315 EKMLVLDTDKRITASEALAHPYFSQYHDPDDEPES-EPYDQSFESRQLEIEEWKRLTYEE 373
Query: 327 SVKFNPDP 334
F P
Sbjct: 374 VCSFETPP 381
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 293 bits (750), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 140/315 (44%), Positives = 208/315 (66%), Gaps = 5/315 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
+A ++ R++VA+KK+ F ++I ARRT RE++LL+H++HENVI + D+ P + F
Sbjct: 38 SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDF 97
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
++VY+V LM DL+ I++ Q L+D+H Q+ +YQLLRGLKY+HSA ++HRDLKPSN+ +
Sbjct: 98 SEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 156
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+L+I DFGLAR E MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 157 NEDCELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+ + LFPG DY+ QL+ I E++G+P L + S++AR Y++ LP ++ ++ F
Sbjct: 215 LQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRG 274
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ A+DLL +MLV D ++R++ EAL H Y HD DEP P+ E T +
Sbjct: 275 ANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEA-EPYDESVEAKERTLE 333
Query: 318 HIRELIWRESVKFNP 332
+EL ++E + F P
Sbjct: 334 EWKELTYQEVLSFKP 348
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 290 bits (741), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 207/313 (66%), Gaps = 5/313 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
+A ++ R++VA+KK+ F ++I ARRT RE++LL+H++HENVI + D+ P + F
Sbjct: 46 SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDF 105
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
++VY+V LM DL+ I++S Q L+D+H Q+ +YQLLRGLKY+HSA ++HRDLKPSN+ +
Sbjct: 106 SEVYLVTTLMGADLNNIVKS-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 164
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N +L+I DFGLAR E MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 165 NEDSELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+ + LFPG DY+ QL+ I E++G+P L + S++AR Y++ LP ++ ++ F
Sbjct: 223 LQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRG 282
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ A+DLL +MLV D ++R++ EAL H Y HD DEP P+ E T +
Sbjct: 283 ANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEA-EPYDESVEAKERTLE 341
Query: 318 HIRELIWRESVKF 330
+EL ++E + F
Sbjct: 342 EWKELTYQEVLSF 354
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 287 bits (735), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 206/313 (65%), Gaps = 5/313 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
+A ++ R++VA+KK+ F ++I ARRT RE++LL+H++HENVI + D+ P + F
Sbjct: 46 SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDF 105
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
++VY+V LM DL+ I++ Q L+D+H Q+ +YQLLRGLKY+HSA ++HRDLKPSN+ +
Sbjct: 106 SEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 164
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N +L+I DFGLAR E MT YV TRWYRAPE++LN Y +DIWSVGCI+ E+
Sbjct: 165 NEDSELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+ + LFPG DY+ QL+ I E++G+P L + S++AR Y++ LP ++ ++ F
Sbjct: 223 LQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRG 282
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
+ A+DLL +MLV D ++R++ EAL H Y HD DEP P+ E T +
Sbjct: 283 ANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEA-EPYDESVEAKERTLE 341
Query: 318 HIRELIWRESVKF 330
+EL ++E + F
Sbjct: 342 EWKELTYQEVLSF 354
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 281 bits (718), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/315 (44%), Positives = 204/315 (64%), Gaps = 5/315 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
+AV+ T +VAIKK+ F + + A+R RE++LL+HM HENVI + D+ P + D F
Sbjct: 43 SAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
D Y+V M TDL ++++ ++L +D Q+ +YQ+L+GL+Y+H+A ++HRDLKP NL +
Sbjct: 103 TDFYLVMPFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV 161
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR M VVTRWYRAPE++LN YT +DIWSVGCI+ E+
Sbjct: 162 NEDCELKILDFGLARQADSE--MXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T + LF G D++ QL+ I ++ G+P + L+SD A+ Y++ LP K+ FA+ N
Sbjct: 220 ITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTN 279
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
S AV+LLEKMLV D +R+T EAL HPY +SLHD DEP + + F+ T D
Sbjct: 280 ASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQK-YDDSFDDVDRTLD 338
Query: 318 HIRELIWRESVKFNP 332
+ + ++E + F P
Sbjct: 339 EWKRVTYKEVLSFKP 353
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 280 bits (716), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 196/315 (62%), Gaps = 5/315 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
+A++ + E+VAIKK+ F + I A+R RE+ LL+HM+HENVI + D+ P F
Sbjct: 60 SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
D Y+V M TDL +I+ + +++ QY +YQ+L+GLKY+HSA V+HRDLKP NL +
Sbjct: 120 YDFYLVMPFMQTDLQKIM--GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 177
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR MT YVVTRWYRAPE++L+ Y +DIWSVGCI+ E+
Sbjct: 178 NEDCELKILDFGLARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 235
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T + LF GKDY+ QL I ++ G P + L A+ Y++ LP+ ++ F FP
Sbjct: 236 LTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPR 295
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
S A DLLEKML D +KR+T +AL HP+ + D +E +PF EH T D
Sbjct: 296 ASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVD 355
Query: 318 HIRELIWRESVKFNP 332
++ I++E V F+P
Sbjct: 356 EWKQHIYKEIVNFSP 370
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 279 bits (714), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 196/315 (62%), Gaps = 5/315 (1%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTF 77
+A++ + E+VAIKK+ F + I A+R RE+ LL+HM+HENVI + D+ P F
Sbjct: 42 SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
D Y+V M TDL +I+ + +++ QY +YQ+L+GLKY+HSA V+HRDLKP NL +
Sbjct: 102 YDFYLVMPFMQTDLQKIM--GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 159
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
N C+LKI DFGLAR MT YVVTRWYRAPE++L+ Y +DIWSVGCI+ E+
Sbjct: 160 NEDCELKILDFGLARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 217
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
+T + LF GKDY+ QL I ++ G P + L A+ Y++ LP+ ++ F FP
Sbjct: 218 LTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPR 277
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTED 317
S A DLLEKML D +KR+T +AL HP+ + D +E +PF EH T D
Sbjct: 278 ASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVD 337
Query: 318 HIRELIWRESVKFNP 332
++ I++E V F+P
Sbjct: 338 EWKQHIYKEIVNFSP 352
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/356 (38%), Positives = 210/356 (58%), Gaps = 50/356 (14%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPP 72
+ I +++ T E VA+KKI +AF N DA+RT REI +L + HEN++ + +++R
Sbjct: 22 YGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA- 80
Query: 73 KKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
D DVY+V++ M+TDLH +IR++ L H QY +YQL++ +KY+HS +LHRD+KP
Sbjct: 81 --DNDRDVYLVFDYMETDLHAVIRANI-LEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKP 137
Query: 133 SNLLLNASCDLKIGDFGLART------------------TSETD----FMTEYVVTRWYR 170
SN+LLNA C +K+ DFGL+R+ T D +T+YV TRWYR
Sbjct: 138 SNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYR 197
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGF 230
APE+LL T+YT ID+WS+GCILGEI+ +P+FPG ++QL I +I P + +
Sbjct: 198 APEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVES 257
Query: 231 LRSDNARRYVRQLP------RCRKQQFATRFPNK----------SSGAVDLLEKMLVFDP 274
++S A+ + L + K+ T++ N + A+DLL+K+L F+P
Sbjct: 258 IQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317
Query: 275 NKRITVEEALRHPYLQSLHDLNDEPVCPR----PFHFDFEHSSCTEDHIRELIWRE 326
NKRI+ +AL+HP++ H+ N+EP C P + + +HS D R L++ E
Sbjct: 318 NKRISANDALKHPFVSIFHNPNEEPNCDHIITIPINDNVKHSI---DDYRNLVYSE 370
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 197/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 77 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 136
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 194
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 195 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 253
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 254 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 312
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 313 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 372
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 373 PQIYDKQLDEREHTIEEWKELIYKE 397
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 241 bits (614), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 197/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 40 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 99
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 100 EEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 157
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 158 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 216
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 217 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 275
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 276 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 335
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 336 PQIYDKQLDEREHTIEEWKELIYKE 360
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 240 bits (613), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 197/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 335 PQIYDKQLDEREHTIEEWKELIYKE 359
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 240 bits (613), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 197/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 40 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 99
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 100 EEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 157
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 158 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 216
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 217 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 275
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 276 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 335
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 336 PQIYDKQLDEREHTIEEWKELIYKE 360
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 240 bits (613), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 197/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 335 PQIYDKQLDEREHTIEEWKELIYKE 359
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 240 bits (613), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 197/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 77 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 136
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 194
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 195 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 253
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 254 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 312
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 313 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 372
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 373 PQIYDKQLDEREHTIEEWKELIYKE 397
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 240 bits (613), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 197/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 38 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 97
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 98 EEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 155
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 156 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 214
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 215 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 273
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 274 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 333
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 334 PQIYDKQLDEREHTIEEWKELIYKE 358
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 240 bits (613), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 197/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 32 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 92 EEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 149
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 150 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 208
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 209 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 267
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 327
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 328 PQIYDKQLDEREHTIEEWKELIYKE 352
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 240 bits (612), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 197/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 33 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 92
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 93 EEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 150
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 151 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 209
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 210 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 268
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 269 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 328
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 329 PQIYDKQLDEREHTIEEWKELIYKE 353
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 240 bits (612), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 197/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 33 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 92
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 93 EEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 150
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 151 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 209
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 210 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 268
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 269 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 328
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 329 PQIYDKQLDEREHTIEEWKELIYKE 353
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 196/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 335 PQIYDKQLDEREHTIEEWKELIYKE 359
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 196/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 33 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 92
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 93 EEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 150
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +D+WSVGCI+
Sbjct: 151 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDLWSVGCIM 209
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 210 GEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 268
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 269 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 328
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 329 PKIPDKQLDEREHTIEEWKELIYKE 353
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 196/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 44 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 103
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 104 EEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 161
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +D+WSVGCI+
Sbjct: 162 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDLWSVGCIM 220
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 221 GEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 279
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 280 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 339
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 340 PKIPDKQLDEREHTIEEWKELIYKE 364
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 194/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ LFPG D++ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 335 PKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 238 bits (608), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 196/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 335 PQIYDKQLDEREHTIEEWKELIYKE 359
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 196/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 32 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 92 EEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSN 149
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 150 IVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 208
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 209 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 267
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D + E
Sbjct: 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPP 327
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + + T + +ELI++E
Sbjct: 328 PQIYDKQLDEREHTIEEWKELIYKE 352
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 238 bits (607), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 194/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VA+KK+ F N A+R RE+ LL+ + H+N+I++ ++ P K
Sbjct: 39 IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYLVMELMDANLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART MT YVVTR+YRAPE++L Y A +DIWSVGCI+
Sbjct: 157 IVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMG-YAANVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ +F G D++ Q + E +G+P + L+ R YV P+ +F
Sbjct: 216 GELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP-TVRNYVENRPKYPGIKFEEL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP+KRI+V+EALRHPY+ +D + E
Sbjct: 275 FPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + E + +ELI++E
Sbjct: 335 PQIYDAQLEEREHAIEEWKELIYKE 359
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 194/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ LFPG D++ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 335 PKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 192/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VA+KK+ F N A+R RE+ LL+ + H+N+I++ ++ P K
Sbjct: 37 IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL 96
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 97 EEFQDVYLVMELMDANLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 154
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART S MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 155 IVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 213
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ +F G D++ Q + E +G+P + L+ R YV P F
Sbjct: 214 GELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP-TVRNYVENRPAYPGIAFEEL 272
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV DP+KRI+V+EALRHPY+ +D + E
Sbjct: 273 FPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPP 332
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + E + +ELI++E
Sbjct: 333 PQIYDAQLEEREHAIEEWKELIYKE 357
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 237 bits (604), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 193/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ LFPG D++ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 335 PKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 195/325 (60%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + M VVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P A + L+ R YV P+ F
Sbjct: 216 GEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQP-TVRNYVENRPKYAGYSFEKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 335 PKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 194/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 40 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 99
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 100 EEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 157
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 158 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 216
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ LFPG D++ Q + E +G+P + L+ R YV P+ F
Sbjct: 217 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 275
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 276 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 335
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 336 PKIPDKQLDEREHTIEEWKELIYKE 360
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 194/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ LFPG D++ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 335 PKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 193/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ LFPG D++ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 335 PKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 193/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ LFPG D++ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 335 PKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 234 bits (598), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/334 (40%), Positives = 196/334 (58%), Gaps = 18/334 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + MT VVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ LFPG D++ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 275 FPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRESVKFNPDPT 335
P+ + T + +ELI++E + PT
Sbjct: 335 PKIPDKQLDEREHTIEEWKELIYKEVMDLPKRPT 368
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 234 bits (597), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 192/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 39 IVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVG I+
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGVIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ LFPG D++ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 335 PKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 234 bits (596), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 181/292 (61%), Gaps = 17/292 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+ +D
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 326
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 234 bits (596), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 125/323 (38%), Positives = 182/323 (56%), Gaps = 59/323 (18%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD 88
VAIKKI F+++ID +R LREI +L + H++V+ + DI+ P + F+++Y+V E+ D
Sbjct: 81 VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD 140
Query: 89 TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDF 148
+D ++ R+ LT+ H + LY LL G+KYVHSA +LHRDLKP+N L+N C +K+ DF
Sbjct: 141 SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDF 200
Query: 149 GLARTTS--------------ETDF--------------MTEYVVTRWYRAPELLLNCTE 180
GLART E D +T +VVTRWYRAPEL+L
Sbjct: 201 GLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQEN 260
Query: 181 YTAAIDIWSVGCILGEIMT-----------REPLFPG--------------------KDY 209
YT AID+WS+GCI E++ R PLFPG +
Sbjct: 261 YTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGN 320
Query: 210 VHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKM 269
QL +I ++G+P + + L ++A+RY+R P+ A RFP S+ A+ LL++M
Sbjct: 321 RDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRM 380
Query: 270 LVFDPNKRITVEEALRHPYLQSL 292
LVF+PNKRIT+ E L HP+ + +
Sbjct: 381 LVFNPNKRITINECLAHPFFKEV 403
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 234 bits (596), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 192/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVG I+
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGVIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ LFPG D++ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 335 PKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 193/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 41 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 100
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 101 EEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 158
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + M +VVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 159 IVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 217
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ LFPG D++ Q + E +G+P + L+ R YV P+ F
Sbjct: 218 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 276
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 277 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 336
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 337 PKIPDKQLDEREHTIEEWKELIYKE 361
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 194/325 (59%), Gaps = 18/325 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I + ++ P K
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + C LKI DFGLART + M VVTR+YRAPE++L Y +D+WSVGCI+
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-YKENVDLWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPKYAGYSFEKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-EPVC 301
FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+ +D ++ E
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 302 PRPFHFDFEHSSCTEDHIRELIWRE 326
P+ + T + +ELI++E
Sbjct: 335 PKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 231 bits (589), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/287 (43%), Positives = 179/287 (62%), Gaps = 17/287 (5%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK- 74
I AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++ ++ P K
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 75 DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA ++HRDLKPSN
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y +DIWSVGCI+
Sbjct: 157 IVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIM 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P+ F
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKL 274
Query: 255 FPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 199/380 (52%), Gaps = 57/380 (15%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
RG Y + A + T + VAIKK+ F+++ID +R LREI +L ++ + +I +
Sbjct: 36 RGSYGYVYL-----AYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 66 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
D+I P F+++YIV E+ D+DL ++ ++ LT++H + LY LL G ++H + +
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGI 150
Query: 126 LHRDLKPSNLLLNASCDLKIGDFGLART-TSETDF----------------------MTE 162
+HRDLKP+N LLN C +K+ DFGLART SE D +T
Sbjct: 151 IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTS 210
Query: 163 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM-----------TREPLFPGKD--- 208
+VVTRWYRAPEL+L YT +IDIWS GCI E++ R PLFPG
Sbjct: 211 HVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFP 270
Query: 209 --------YVH------QLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
VH QL +I +IG+P + L + +Y++ P + +
Sbjct: 271 LSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQK 330
Query: 255 FPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEH-SS 313
+P+ S ++LLE ML F+PNKRIT+++AL HPYL+ + E + F+
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIILPFDDWMV 390
Query: 314 CTEDHIRELIWRESVKFNPD 333
+E +R + +E F+P+
Sbjct: 391 LSETQLRYIFLKEVQSFHPE 410
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 215 bits (547), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 177/304 (58%), Gaps = 17/304 (5%)
Query: 19 AAVNSETREEVAIKKIGNAFD-----NIID----ARRTLREIKLLRHMEHENVIAIKDII 69
A V+SE VAIK++ N NI+ +R LREI+LL H H N++ ++DI
Sbjct: 40 AGVDSEGIP-VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF 98
Query: 70 RPPKKDTFNDVYIVYELMDTDLHQIIRSDQQL--TDDHCQYFLYQLLRGLKYVHSASVLH 127
++ + +Y+V ELM TDL Q+I DQ++ + H QYF+Y +L GL +H A V+H
Sbjct: 99 VHFEEPAMHKLYLVTELMRTDLAQVIH-DQRIVISPQHIQYFMYHILLGLHVLHEAGVVH 157
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDI 187
RDL P N+LL + D+ I DF LAR + T YV RWYRAPEL++ +T +D+
Sbjct: 158 RDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDM 217
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ-LPRC 246
WS GC++ E+ R+ LF G + +QL I E++G+P + S +AR Y+R L
Sbjct: 218 WSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNV 277
Query: 247 RKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND--EPVCPRP 304
+ + P A+DL+ KML F+P +RI+ E+ALRHPY +SL D D E + R
Sbjct: 278 PARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSER- 336
Query: 305 FHFD 308
FHFD
Sbjct: 337 FHFD 340
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 215 bits (547), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 177/304 (58%), Gaps = 17/304 (5%)
Query: 19 AAVNSETREEVAIKKIGNAFD-----NIID----ARRTLREIKLLRHMEHENVIAIKDII 69
A V+SE VAIK++ N NI+ +R LREI+LL H H N++ ++DI
Sbjct: 40 AGVDSEGIP-VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF 98
Query: 70 RPPKKDTFNDVYIVYELMDTDLHQIIRSDQQL--TDDHCQYFLYQLLRGLKYVHSASVLH 127
++ + +Y+V ELM TDL Q+I DQ++ + H QYF+Y +L GL +H A V+H
Sbjct: 99 VHFEEPAMHKLYLVTELMRTDLAQVIH-DQRIVISPQHIQYFMYHILLGLHVLHEAGVVH 157
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDI 187
RDL P N+LL + D+ I DF LAR + T YV RWYRAPEL++ +T +D+
Sbjct: 158 RDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDM 217
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ-LPRC 246
WS GC++ E+ R+ LF G + +QL I E++G+P + S +AR Y+R L
Sbjct: 218 WSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNV 277
Query: 247 RKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND--EPVCPRP 304
+ + P A+DL+ KML F+P +RI+ E+ALRHPY +SL D D E + R
Sbjct: 278 PARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSER- 336
Query: 305 FHFD 308
FHFD
Sbjct: 337 FHFD 340
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 211 bits (536), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 194/383 (50%), Gaps = 60/383 (15%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
RG Y + A + + VAIKK+ F+++ID +R LREI +L ++ + +I +
Sbjct: 38 RGSYGYVYL-----AYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 92
Query: 66 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
D+I P F+++YIV E+ D+DL ++ ++ LT+ H + LY LL G K++H + +
Sbjct: 93 HDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGI 152
Query: 126 LHRDLKPSNLLLNASCDLKIGDFGLART-TSETDF------------------------- 159
+HRDLKP+N LLN C +KI DFGLART S+ D
Sbjct: 153 IHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQ 212
Query: 160 MTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM-----------TREPLFPGKD 208
+T +VVTRWYRAPEL+L YT +IDIWS GCI E++ R PLFPG
Sbjct: 213 LTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSS 272
Query: 209 -----------YVH------QLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQF 251
VH QL +I +IG+P + L + +Y++ P
Sbjct: 273 CFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDL 332
Query: 252 ATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEH 311
+ ++ + S +DLLE ML F+ KRIT+++AL HPYL+ + N E F+
Sbjct: 333 SKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLENFSTEKIILPFDD 392
Query: 312 -SSCTEDHIRELIWRESVKFNPD 333
+E +R + +E F+ D
Sbjct: 393 WMVLSETQLRYIFLKEIQSFHAD 415
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 172/300 (57%), Gaps = 19/300 (6%)
Query: 15 FIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK 74
+FSA V+++ + VAIKKI + + LREIK++R ++H+N++ + +I+ P
Sbjct: 26 LVFSA-VDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGS 82
Query: 75 DT---------FNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
N VYIV E M+TDL ++ L ++H + F+YQLLRGLKY+HSA+V
Sbjct: 83 QLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP-LLEEHARLFMYQLLRGLKYIHSANV 141
Query: 126 LHRDLKPSNLLLNAS-CDLKIGDFGLARTT----SETDFMTEYVVTRWYRAPELLLNCTE 180
LHRDLKP+NL +N LKIGDFGLAR S ++E +VT+WYR+P LLL+
Sbjct: 142 LHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNN 201
Query: 181 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 240
YT AID+W+ GCI E++T + LF G + Q++LI E I + L S Y+
Sbjct: 202 YTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLS-VIPVYI 260
Query: 241 RQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
R + P S AVD LE++L F P R+T EEAL HPY+ DEP+
Sbjct: 261 RNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEPI 320
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 29 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 83
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 84 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 143
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR T VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 144 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 203
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 204 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 261
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 262 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 155/282 (54%), Gaps = 10/282 (3%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + A N T E VA+KKI + +REI LL+ + H N++ + D+I
Sbjct: 20 YGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH--- 76
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
T N +Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLK
Sbjct: 77 --TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLK 134
Query: 132 PSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSV 190
P NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+ A+DIWS+
Sbjct: 135 PQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 194
Query: 191 GCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQ 250
GCI E++TR LFPG + QL I +G+PD+ + S Y P+ +Q
Sbjct: 195 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQD 252
Query: 251 FATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 292
F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 253 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 294
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 76
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLI 136
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR T VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 137 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 254
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 23 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 77
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 78 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 137
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR T VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 138 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 198 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 255
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 256 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 76
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR T VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 137 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 254
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 76
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR T VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 137 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 254
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 21 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 75
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR T VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 136 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 196 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 253
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 254 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 190 bits (483), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 21 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 75
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR T VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 136 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 196 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 253
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 254 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 155/282 (54%), Gaps = 10/282 (3%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + A N T E VA+KKI + +REI LL+ + H N++ + D+I
Sbjct: 19 YGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH--- 75
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
T N +Y+V+E +D DL + + + + + +L+QLL+GL + HS VLHRDLK
Sbjct: 76 --TENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLK 133
Query: 132 PSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSV 190
P NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+
Sbjct: 134 PQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193
Query: 191 GCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQ 250
GCI E++TR LFPG + QL I +G+PD+ + S Y P+ +Q
Sbjct: 194 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQD 251
Query: 251 FATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 292
F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 25 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 79
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 80 LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI 139
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 140 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 200 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 257
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 258 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 23 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 77
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 78 LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI 137
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 138 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 198 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 255
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 256 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 26 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 80
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 81 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 140
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 141 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 200
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 201 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 258
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 259 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 24 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 78
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 79 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 138
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 139 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 198
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 199 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 256
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 257 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 21 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 75
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 136 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 196 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 253
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 254 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 76
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 137 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 254
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 24 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 78
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 79 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI 138
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 139 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 198
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 199 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 256
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 257 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 21 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 75
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 136 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 196 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 253
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 254 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 25 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 79
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 80 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 139
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 140 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 200 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 257
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 258 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 76
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 137 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 254
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 25 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 79
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 80 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 139
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 140 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 200 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 257
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 258 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 24 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 78
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 79 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 138
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 139 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 198
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 199 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 256
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 257 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 76
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 137 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 254
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 23 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 77
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 78 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 137
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 138 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 198 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 255
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 256 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+ KI + +REI LL+ + H N++ + D+I T N
Sbjct: 22 ARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 76
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR T VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 137 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 254
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+ KI + +REI LL+ + H N++ + D+I T N
Sbjct: 21 ARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 75
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR T VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 136 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 196 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 253
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 254 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 23 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 77
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 78 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI 137
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 138 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 198 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 255
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 256 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 23 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 77
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 78 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 137
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 138 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 198 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 255
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 256 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 76
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 137 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 254
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 150/274 (54%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 24 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 78
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 79 LYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 138
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 139 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 198
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 199 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 256
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 257 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 150/274 (54%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 25 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 79
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 80 LYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 139
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 140 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 200 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 257
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 258 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 187 bits (476), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 145/251 (57%), Gaps = 10/251 (3%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDH- 105
+RE+ LL+ ++H N++ + DII K T +V+E +D DL Q + + + H
Sbjct: 47 AIREVSLLKDLKHANIVTLHDIIHTEKSLT-----LVFEYLDKDLKQYLDDCGNIINMHN 101
Query: 106 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYV 164
+ FL+QLLRGL Y H VLHRDLKP NLL+N +LK+ DFGLAR S T V
Sbjct: 102 VKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV 161
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
VT WYR P++LL T+Y+ ID+W VGCI E+ T PLFPG QL I ++G+P
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPT 221
Query: 225 DASL-GFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA 283
+ + G L ++ + Y P+ R + + P S DLL K+L F+ RI+ E+A
Sbjct: 222 EETWPGILSNEEFKTY--NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDA 279
Query: 284 LRHPYLQSLHD 294
++HP+ SL +
Sbjct: 280 MKHPFFLSLGE 290
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 150/274 (54%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 25 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 79
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 80 LYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 139
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 140 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 200 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 257
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 258 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 187 bits (475), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 153/280 (54%), Gaps = 10/280 (3%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
+ + A N T E VA+KKI + +REI LL+ + H N++ + D+I
Sbjct: 15 YGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH--- 71
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
T N +Y+V+E + DL + + + + +L+QLL+GL + HS VLHRDLK
Sbjct: 72 --TENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLK 129
Query: 132 PSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSV 190
P NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+ A+DIWS+
Sbjct: 130 PQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189
Query: 191 GCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQ 250
GCI E++TR LFPG + QL I +G+PD+ + S Y P+ +Q
Sbjct: 190 GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQD 247
Query: 251 FATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
F+ P LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 187 bits (475), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 150/274 (54%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 76
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 77 LYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI 136
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR VVT WYRAPE+LL C Y+ A+DIWS+GCI E
Sbjct: 137 NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 254
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 29 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 83
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 84 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 143
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR T VVT WYRAPE+LL Y+ A+DIWS+GCI E
Sbjct: 144 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAE 203
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 204 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 261
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 262 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N T E VA+KKI + +REI LL+ + H N++ + D+I T N
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 76
Query: 80 VYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V+E + DL + + + + + +L+QLL+GL + HS VLHRDLKP NLL+
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
Query: 138 NASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
N +K+ DFGLAR T VVT WYRAPE+LL Y+ A+DIWS+GCI E
Sbjct: 137 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAE 196
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++TR LFPG + QL I +G+PD+ + S Y P+ +Q F+ P
Sbjct: 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVP 254
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 168/292 (57%), Gaps = 31/292 (10%)
Query: 14 FFIFSAAVNSETREEVAIKKIG-NAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP 72
+ + A +S+ R VA+K+I +A D I + +REI LL+ + H N++++ D+I
Sbjct: 34 YGVVYKAKDSQGRI-VALKRIRLDAEDEGIPST-AIREISLLKELHHPNIVSLIDVIHSE 91
Query: 73 KKDTFNDVYIVYELMDTDLHQIIRSDQQ-LTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
+ T +V+E M+ DL +++ ++ L D + +LYQLLRG+ + H +LHRDLK
Sbjct: 92 RCLT-----LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 132 PSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSV 190
P NLL+N+ LK+ DFGLAR T VVT WYRAP++L+ +Y+ ++DIWS+
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206
Query: 191 GCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY--VRQLPRCRK 248
GCI E++T +PLFPG QL I ++G+P N R + V++LP ++
Sbjct: 207 GCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP-----------NPREWPQVQELPLWKQ 255
Query: 249 QQF--------ATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 292
+ F ++ P +DLL ML FDPNKRI+ +A+ HPY + L
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 168/292 (57%), Gaps = 31/292 (10%)
Query: 14 FFIFSAAVNSETREEVAIKKIG-NAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP 72
+ + A +S+ R VA+K+I +A D I + +REI LL+ + H N++++ D+I
Sbjct: 34 YGVVYKAKDSQGRI-VALKRIRLDAEDEGIPST-AIREISLLKELHHPNIVSLIDVIHSE 91
Query: 73 KKDTFNDVYIVYELMDTDLHQIIRSDQQ-LTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
+ T +V+E M+ DL +++ ++ L D + +LYQLLRG+ + H +LHRDLK
Sbjct: 92 RCLT-----LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 132 PSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSV 190
P NLL+N+ LK+ DFGLAR T VVT WYRAP++L+ +Y+ ++DIWS+
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206
Query: 191 GCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY--VRQLPRCRK 248
GCI E++T +PLFPG QL I ++G+P N R + V++LP ++
Sbjct: 207 GCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP-----------NPREWPQVQELPLWKQ 255
Query: 249 QQF--------ATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 292
+ F ++ P +DLL ML FDPNKRI+ +A+ HPY + L
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 164/283 (57%), Gaps = 22/283 (7%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRT-LREIKLLRHMEHENVIAIKDIIRPPKKDTFN 78
+N T VA+K++ D+ T +REI L++ ++HEN++ + D+I T N
Sbjct: 24 GLNKTTGVYVALKEV--KLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH-----TEN 76
Query: 79 DVYIVYELMDTDLHQIIRS------DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
+ +V+E MD DL + + S + L + +YF +QLL+GL + H +LHRDLKP
Sbjct: 77 KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKP 136
Query: 133 SNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVG 191
NLL+N LK+GDFGLAR + + VVT WYRAP++L+ Y+ +IDIWS G
Sbjct: 137 QNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCG 196
Query: 192 CILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA---SLGFLRSDNARRYVRQLPRCRK 248
CIL E++T +PLFPG + QL+LI +++G+P+++ S+ L N R PR +
Sbjct: 197 CILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRP-PRDLR 255
Query: 249 Q--QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
Q Q T+ P +D L +L +P+ R++ ++AL HP+
Sbjct: 256 QVLQPHTKEP-LDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 144/266 (54%), Gaps = 9/266 (3%)
Query: 27 EEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYEL 86
E A+KKI ++ T+REI +L+ ++H N++ + D+I K+ + +V+E
Sbjct: 27 ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR-----LVLVFEH 81
Query: 87 MDTDLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKI 145
+D DL +++ + L + FL QLL G+ Y H VLHRDLKP NLL+N +LKI
Sbjct: 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI 141
Query: 146 GDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 204
DFGLAR T VVT WYRAP++L+ +Y+ IDIWSVGCI E++ PLF
Sbjct: 142 ADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLF 201
Query: 205 PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVD 264
PG QL I ++G+P+ S + +Y + + +D
Sbjct: 202 PGVSEADQLMRIFRILGTPN--SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGID 259
Query: 265 LLEKMLVFDPNKRITVEEALRHPYLQ 290
LL KML DPN+RIT ++AL H Y +
Sbjct: 260 LLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 144/266 (54%), Gaps = 9/266 (3%)
Query: 27 EEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYEL 86
E A+KKI ++ T+REI +L+ ++H N++ + D+I K+ + +V+E
Sbjct: 27 ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR-----LVLVFEH 81
Query: 87 MDTDLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKI 145
+D DL +++ + L + FL QLL G+ Y H VLHRDLKP NLL+N +LKI
Sbjct: 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI 141
Query: 146 GDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 204
DFGLAR T VVT WYRAP++L+ +Y+ IDIWSVGCI E++ PLF
Sbjct: 142 ADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
Query: 205 PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVD 264
PG QL I ++G+P+ S + +Y + + +D
Sbjct: 202 PGVSEADQLMRIFRILGTPN--SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGID 259
Query: 265 LLEKMLVFDPNKRITVEEALRHPYLQ 290
LL KML DPN+RIT ++AL H Y +
Sbjct: 260 LLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 144/266 (54%), Gaps = 9/266 (3%)
Query: 27 EEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYEL 86
E A+KKI ++ T+REI +L+ ++H N++ + D+I K+ + +V+E
Sbjct: 27 ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR-----LVLVFEH 81
Query: 87 MDTDLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKI 145
+D DL +++ + L + FL QLL G+ Y H VLHRDLKP NLL+N +LKI
Sbjct: 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI 141
Query: 146 GDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 204
DFGLAR T +VT WYRAP++L+ +Y+ IDIWSVGCI E++ PLF
Sbjct: 142 ADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
Query: 205 PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVD 264
PG QL I ++G+P+ S + +Y + + +D
Sbjct: 202 PGVSEADQLMRIFRILGTPN--SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGID 259
Query: 265 LLEKMLVFDPNKRITVEEALRHPYLQ 290
LL KML DPN+RIT ++AL H Y +
Sbjct: 260 LLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 150/273 (54%), Gaps = 10/273 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N ET E VA+K++ D+ LREI LL+ ++H+N++ + D++ KK T
Sbjct: 21 AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT--- 77
Query: 80 VYIVYELMDTDLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
+V+E D DL + S + L + + FL+QLL+GL + HS +VLHRDLKP NLL+N
Sbjct: 78 --LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN 135
Query: 139 ASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+ +LK+ DFGLAR + VVT WYR P++L Y+ +ID+WS GCI E+
Sbjct: 136 RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
Query: 198 M-TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
PLFPG D QL+ I L+G+P + + + P P
Sbjct: 196 ANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYP--ATTSLVNVVP 253
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
++ DLL+ +L +P +RI+ EEAL+HPY
Sbjct: 254 KLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 150/273 (54%), Gaps = 10/273 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A N ET E VA+K++ D+ LREI LL+ ++H+N++ + D++ KK T
Sbjct: 21 AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT--- 77
Query: 80 VYIVYELMDTDLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
+V+E D DL + S + L + + FL+QLL+GL + HS +VLHRDLKP NLL+N
Sbjct: 78 --LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN 135
Query: 139 ASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+ +LK+ +FGLAR + VVT WYR P++L Y+ +ID+WS GCI E+
Sbjct: 136 RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
Query: 198 MTR-EPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
PLFPG D QL+ I L+G+P + + + P P
Sbjct: 196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYP--ATTSLVNVVP 253
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
++ DLL+ +L +P +RI+ EEAL+HPY
Sbjct: 254 KLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 153/298 (51%), Gaps = 17/298 (5%)
Query: 14 FFIFSAAVNSETREEVAIKKI-----GNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 68
F A + T + VAIKKI A D I R LREIKLL+ + H N+I + D
Sbjct: 23 FATVYKARDKNTNQIVAIKKIKLGHRSEAKDGI--NRTALREIKLLQELSHPNIIGLLDA 80
Query: 69 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQ-LTDDHCQYFLYQLLRGLKYVHSASVLH 127
+++ +V++ M+TDL II+ + LT H + ++ L+GL+Y+H +LH
Sbjct: 81 F-----GHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135
Query: 128 RDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCTEYTAAID 186
RDLKP+NLLL+ + LK+ DFGLA++ S VVTRWYRAPELL Y +D
Sbjct: 136 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVD 195
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRC 246
+W+VGCIL E++ R P PG + QL I E +G+P + + S + P
Sbjct: 196 MWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI 255
Query: 247 RKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRP 304
F +DL++ + +F+P RIT +AL+ Y + PRP
Sbjct: 256 PLHHI---FSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRP 310
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 164/293 (55%), Gaps = 7/293 (2%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G+ + + + N +T + VAIKK + D+ + + LREI++L+ ++H N++ +
Sbjct: 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 67 DIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
++ R ++ +++V+E D T LH++ R + + + + +Q L+ + + H +
Sbjct: 69 EVFRRKRR-----LHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 126 LHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
+HRD+KP N+L+ +K+ DFG AR T +D+ + V TRWYR+PELL+ T+Y
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPP 183
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
+D+W++GC+ E+++ PL+PGK V QL LI + +G ++ V+
Sbjct: 184 VDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD 243
Query: 245 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND 297
+ +FPN S A+ LL+ L DP +R+T E+ L HPY +++ ++ D
Sbjct: 244 PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIED 296
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 141/254 (55%), Gaps = 16/254 (6%)
Query: 47 TLREIKLLRHME---HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRS--DQQL 101
T+RE+ +LRH+E H NV+ + D+ + D + +V+E +D DL + + +
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGV 117
Query: 102 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT 161
+ + ++QLLRGL ++HS V+HRDLKP N+L+ +S +K+ DFGLAR S +T
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 162 EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 221
VVT WYRAPE+LL + Y +D+WSVGCI E+ R+PLF G V QL I ++IG
Sbjct: 178 SVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 222 SPDDASLGFLRSDNARRYV--RQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRI 278
P + D R RQ + Q +F + DLL K L F+P KRI
Sbjct: 237 LPGE-------EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI 289
Query: 279 TVEEALRHPYLQSL 292
+ AL HPY Q L
Sbjct: 290 SAYSALSHPYFQDL 303
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 141/254 (55%), Gaps = 16/254 (6%)
Query: 47 TLREIKLLRHME---HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRS--DQQL 101
T+RE+ +LRH+E H NV+ + D+ + D + +V+E +D DL + + +
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGV 117
Query: 102 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT 161
+ + ++QLLRGL ++HS V+HRDLKP N+L+ +S +K+ DFGLAR S +T
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 162 EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 221
VVT WYRAPE+LL + Y +D+WSVGCI E+ R+PLF G V QL I ++IG
Sbjct: 178 SVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 222 SPDDASLGFLRSDNARRYV--RQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRI 278
P + D R RQ + Q +F + DLL K L F+P KRI
Sbjct: 237 LPGE-------EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI 289
Query: 279 TVEEALRHPYLQSL 292
+ AL HPY Q L
Sbjct: 290 SAYSALSHPYFQDL 303
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 140/252 (55%), Gaps = 16/252 (6%)
Query: 47 TLREIKLLRHME---HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRS--DQQL 101
T+RE+ +LRH+E H NV+ + D+ + D + +V+E +D DL + + +
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGV 117
Query: 102 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT 161
+ + ++QLLRGL ++HS V+HRDLKP N+L+ +S +K+ DFGLAR S +T
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 162 EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 221
VVT WYRAPE+LL + Y +D+WSVGCI E+ R+PLF G V QL I ++IG
Sbjct: 178 SVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 222 SPDDASLGFLRSDNARRYV--RQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRI 278
P + D R RQ + Q +F + DLL K L F+P KRI
Sbjct: 237 LPGE-------EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI 289
Query: 279 TVEEALRHPYLQ 290
+ AL HPY Q
Sbjct: 290 SAYSALSHPYFQ 301
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 160 bits (405), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 150/278 (53%), Gaps = 14/278 (5%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A+++ T E VAIK+I + +RE+ LL+ ++H N+I +K +I +
Sbjct: 53 AIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR----- 107
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+++++E + DL + + + ++ + FLYQL+ G+ + HS LHRDLKP NLLL+
Sbjct: 108 LHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSV 167
Query: 140 SCD-----LKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCI 193
S LKIGDFGLAR T ++T WYR PE+LL Y+ ++DIWS+ CI
Sbjct: 168 SDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACI 227
Query: 194 LGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFAT 253
E++ + PLFPG + QL I E++G PDD + + + + + P+ R +
Sbjct: 228 WAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA--LPDWKQSFPKFRGKTLKR 285
Query: 254 RF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+DLL ML DP KRI+ + AL HPY
Sbjct: 286 VLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 152/274 (55%), Gaps = 18/274 (6%)
Query: 27 EEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYI--VY 84
+EVAIKK+ + D R RE++++R ++H NV+ +K D ++V++ V
Sbjct: 65 DEVAIKKV------LQDKRFKNRELQIMRIVKHPNVVDLKAFFYS-NGDKKDEVFLNLVL 117
Query: 85 ELMDTDLHQIIRSDQQLTDDH----CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA- 139
E + +++ R +L + ++YQLLR L Y+HS + HRD+KP NLLL+
Sbjct: 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPP 177
Query: 140 SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
S LK+ DFG A+ + + +R+YRAPEL+ T YT IDIWS GC++ E+M
Sbjct: 178 SGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQ 237
Query: 200 REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRF-PNK 258
+PLFPG+ + QL I +++G+P +++ N + P+ R F+ F P
Sbjct: 238 GQPLFPGESGIDQLVEIIKVLGTPSREQ---IKTMNPNYMEHKFPQIRPHPFSKVFRPRT 294
Query: 259 SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 292
A+DL+ ++L + P+ R+T EAL HP+ L
Sbjct: 295 PPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 152/272 (55%), Gaps = 9/272 (3%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N +T VAIKK + D+ + + +REIKLL+ + HEN++ + ++ + K+ Y
Sbjct: 46 NKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKR-----WY 100
Query: 82 IVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
+V+E +D T L + L Q +L+Q++ G+ + HS +++HRD+KP N+L++ S
Sbjct: 101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQS 160
Query: 141 CDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+K+ DFG ART + + + V TRWYRAPELL+ +Y A+D+W++GC++ E+
Sbjct: 161 GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM 220
Query: 200 REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQ-FATRFPNK 258
EPLFPG + QL I +G+ + VR LP ++++ R+P
Sbjct: 221 GEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR-LPEIKEREPLERRYPKL 279
Query: 259 SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
S +DL +K L DP+KR E L H + Q
Sbjct: 280 SEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 135/254 (53%), Gaps = 20/254 (7%)
Query: 47 TLREIKLLRHME---HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQII--RSDQQL 101
T+RE+ LLR +E H NV+ + D+ + D V +V+E +D DL + L
Sbjct: 58 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL 117
Query: 102 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT 161
+ + + Q LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S +T
Sbjct: 118 PAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALT 177
Query: 162 EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 221
VVT WYRAPE+LL T Y +D+WSVGCI E+ R+PLF G QL I +LIG
Sbjct: 178 PVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236
Query: 222 SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR-----FPNKSSGAVDLLEKMLVFDPNK 276
P + D+ R V LPR R P LL +ML F+P+K
Sbjct: 237 LPPE--------DDWPRDV-SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK 287
Query: 277 RITVEEALRHPYLQ 290
RI+ AL+H YL
Sbjct: 288 RISAFRALQHSYLH 301
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 158/295 (53%), Gaps = 26/295 (8%)
Query: 14 FFIFSAAVNSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRP 71
F + A ++ E VAIKK+ G AF N RE++++R ++H N++ ++
Sbjct: 33 FGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRLRYFFYS 84
Query: 72 P--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSA 123
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS
Sbjct: 85 SGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 124 SVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 182
+ HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T+YT
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 201
Query: 183 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 242
++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N +
Sbjct: 202 SSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFK 258
Query: 243 LPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 157/295 (53%), Gaps = 26/295 (8%)
Query: 14 FFIFSAAVNSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRP 71
F + A ++ E VAIKK+ G AF N RE++++R ++H N++ ++
Sbjct: 33 FGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRLRYFFYS 84
Query: 72 P--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSA 123
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS
Sbjct: 85 SGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 124 SVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 182
+ HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T+YT
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT 201
Query: 183 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 242
++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 202 SSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFA 258
Query: 243 LPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 134/254 (52%), Gaps = 20/254 (7%)
Query: 47 TLREIKLLRHME---HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQII--RSDQQL 101
T+RE+ LLR +E H NV+ + D+ + D V +V+E +D DL + L
Sbjct: 50 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL 109
Query: 102 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT 161
+ + + Q LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S +
Sbjct: 110 PAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALA 169
Query: 162 EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 221
VVT WYRAPE+LL T Y +D+WSVGCI E+ R+PLF G QL I +LIG
Sbjct: 170 PVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
Query: 222 SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR-----FPNKSSGAVDLLEKMLVFDPNK 276
P + D+ R V LPR R P LL +ML F+P+K
Sbjct: 229 LPPE--------DDWPRDV-SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK 279
Query: 277 RITVEEALRHPYLQ 290
RI+ AL+H YL
Sbjct: 280 RISAFRALQHSYLH 293
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 134/254 (52%), Gaps = 20/254 (7%)
Query: 47 TLREIKLLRHME---HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQII--RSDQQL 101
T+RE+ LLR +E H NV+ + D+ + D V +V+E +D DL + L
Sbjct: 50 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL 109
Query: 102 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT 161
+ + + Q LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S +
Sbjct: 110 PAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALD 169
Query: 162 EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 221
VVT WYRAPE+LL T Y +D+WSVGCI E+ R+PLF G QL I +LIG
Sbjct: 170 PVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
Query: 222 SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR-----FPNKSSGAVDLLEKMLVFDPNK 276
P + D+ R V LPR R P LL +ML F+P+K
Sbjct: 229 LPPE--------DDWPRDV-SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK 279
Query: 277 RITVEEALRHPYLQ 290
RI+ AL+H YL
Sbjct: 280 RISAFRALQHSYLH 293
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 134/254 (52%), Gaps = 20/254 (7%)
Query: 47 TLREIKLLRHME---HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQII--RSDQQL 101
T+RE+ LLR +E H NV+ + D+ + D V +V+E +D DL + L
Sbjct: 50 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL 109
Query: 102 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT 161
+ + + Q LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S +
Sbjct: 110 PAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALF 169
Query: 162 EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 221
VVT WYRAPE+LL T Y +D+WSVGCI E+ R+PLF G QL I +LIG
Sbjct: 170 PVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
Query: 222 SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR-----FPNKSSGAVDLLEKMLVFDPNK 276
P + D+ R V LPR R P LL +ML F+P+K
Sbjct: 229 LPPE--------DDWPRDV-SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK 279
Query: 277 RITVEEALRHPYLQ 290
RI+ AL+H YL
Sbjct: 280 RISAFRALQHSYLH 293
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 61 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 114
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 115 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 171
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T+YT++
Sbjct: 172 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 231
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 232 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 288
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 289 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 341
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 67 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 120
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 121 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 177
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T+YT++
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 237
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 238 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 294
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 295 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 347
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 33 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 87 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T+YT++
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 203
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 260
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 261 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 46 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 99
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 100 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 156
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T+YT++
Sbjct: 157 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 216
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 217 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 273
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 274 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 326
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 38 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 91
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 92 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 148
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T+YT++
Sbjct: 149 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 208
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 209 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 265
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 266 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 318
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RP 71
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 112 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 165
Query: 72 PKKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 166 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 222
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T+YT++
Sbjct: 223 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 282
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 283 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 339
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 340 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 392
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 69 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 122
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 123 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 179
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T+YT++
Sbjct: 180 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 239
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 240 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 296
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 297 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 349
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RP 71
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 71 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 124
Query: 72 PKKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 125 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 181
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T+YT++
Sbjct: 182 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 241
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 242 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 298
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 299 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 351
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 156/295 (52%), Gaps = 26/295 (8%)
Query: 14 FFIFSAAVNSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRP 71
F + A ++ E VAIKK+ G AF N RE++++R ++H N++ ++
Sbjct: 33 FGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRLRYFFYS 84
Query: 72 P--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSA 123
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS
Sbjct: 85 SGEKKD---EVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 124 SVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 182
+ HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+YT
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 201
Query: 183 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 242
++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 202 SSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFA 258
Query: 243 LPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 154/284 (54%), Gaps = 14/284 (4%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIR---PPKKDT 76
A + +T ++VA+KK+ + LREIK+L+ ++HENV+ + +I R P
Sbjct: 36 ARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95
Query: 77 FNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
+Y+V++ + DL ++ + + T + + LL GL Y+H +LHRD+K +N+
Sbjct: 96 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV 155
Query: 136 LLNASCDLKIGDFGLART-----TSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSV 190
L+ LK+ DFGLAR S+ + VVT WYR PELLL +Y ID+W
Sbjct: 156 LITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGA 215
Query: 191 GCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR-QLPRCRKQ 249
GCI+ E+ TR P+ G HQL LI++L GS + DN Y + +L + +K+
Sbjct: 216 GCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV--WPNVDNYELYEKLELVKGQKR 273
Query: 250 QFATRFPN--KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
+ R + A+DL++K+LV DP +RI ++AL H + S
Sbjct: 274 KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 154/284 (54%), Gaps = 14/284 (4%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIR---PPKKDT 76
A + +T ++VA+KK+ + LREIK+L+ ++HENV+ + +I R P
Sbjct: 37 ARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 96
Query: 77 FNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
+Y+V++ + DL ++ + + T + + LL GL Y+H +LHRD+K +N+
Sbjct: 97 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV 156
Query: 136 LLNASCDLKIGDFGLART-----TSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSV 190
L+ LK+ DFGLAR S+ + VVT WYR PELLL +Y ID+W
Sbjct: 157 LITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGA 216
Query: 191 GCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR-QLPRCRKQ 249
GCI+ E+ TR P+ G HQL LI++L GS + DN Y + +L + +K+
Sbjct: 217 GCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV--WPNVDNYELYEKLELVKGQKR 274
Query: 250 QFATRFPN--KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
+ R + A+DL++K+LV DP +RI ++AL H + S
Sbjct: 275 KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 154/284 (54%), Gaps = 14/284 (4%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIR---PPKKDT 76
A + +T ++VA+KK+ + LREIK+L+ ++HENV+ + +I R P
Sbjct: 37 ARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 96
Query: 77 FNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
+Y+V++ + DL ++ + + T + + LL GL Y+H +LHRD+K +N+
Sbjct: 97 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV 156
Query: 136 LLNASCDLKIGDFGLART-----TSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSV 190
L+ LK+ DFGLAR S+ + VVT WYR PELLL +Y ID+W
Sbjct: 157 LITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGA 216
Query: 191 GCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR-QLPRCRKQ 249
GCI+ E+ TR P+ G HQL LI++L GS + DN Y + +L + +K+
Sbjct: 217 GCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV--WPNVDNYELYEKLELVKGQKR 274
Query: 250 QFATRFPN--KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
+ R + A+DL++K+LV DP +RI ++AL H + S
Sbjct: 275 KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 167/320 (52%), Gaps = 48/320 (15%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII---- 69
F I + E+ + A+KK+ + D R RE+ +++ ++H N+I + D
Sbjct: 20 FGIVCEVFDIESGKRFALKKV------LQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTG 73
Query: 70 ----RPP-----------KKDTFND--------------VYIVYELMDTDLHQI----IR 96
+PP K + N+ + ++ E + LH++ IR
Sbjct: 74 DEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIR 133
Query: 97 SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD-LKIGDFGLARTTS 155
S + + + ++YQL R + ++HS + HRD+KP NLL+N+ + LK+ DFG A+
Sbjct: 134 SGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLI 193
Query: 156 ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRL 215
++ + +R+YRAPEL+L TEYT +ID+WS+GC+ GE++ +PLF G+ + QL
Sbjct: 194 PSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVR 253
Query: 216 ITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKS-SGAVDLLEKMLVFDP 274
I +++G+P + +R + VR P + + + P + S A+DLLE++L ++P
Sbjct: 254 IIQIMGTPTKEQM--IRMNPHYTEVR-FPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310
Query: 275 NKRITVEEALRHPYLQSLHD 294
+ RI EA+ HP+ L +
Sbjct: 311 DLRINPYEAMAHPFFDHLRN 330
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 156/285 (54%), Gaps = 16/285 (5%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFN- 78
A + +T ++VA+KK+ + LREIK+L+ ++HENV+ + +I R K +N
Sbjct: 37 ARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT-KASPYNR 95
Query: 79 ---DVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+Y+V++ + DL ++ + + T + + LL GL Y+H +LHRD+K +N
Sbjct: 96 CKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN 155
Query: 135 LLLNASCDLKIGDFGLART-----TSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
+L+ LK+ DFGLAR S+ + VVT WYR PELLL +Y ID+W
Sbjct: 156 VLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWG 215
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR-QLPRCRK 248
GCI+ E+ TR P+ G HQL LI++L GS + DN Y + +L + +K
Sbjct: 216 AGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV--WPNVDNYELYEKLELVKGQK 273
Query: 249 QQFATRFPN--KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
++ R + A+DL++K+LV DP +RI ++AL H + S
Sbjct: 274 RKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 37 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 90
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 91 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 147
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+YT++
Sbjct: 148 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 207
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 208 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 264
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 265 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 317
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 33 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 87 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+YT++
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 203
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 260
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 261 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 45 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 98
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 99 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 155
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+YT++
Sbjct: 156 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 215
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 216 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 272
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 273 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 325
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 52 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 105
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 106 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 162
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+YT++
Sbjct: 163 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 222
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 223 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 279
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 280 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 332
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RP 71
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 67 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 120
Query: 72 PKKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 121 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 177
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+YT++
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 237
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 238 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 294
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 295 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 347
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 41 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 94
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 95 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 151
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+YT++
Sbjct: 152 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 211
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 212 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 268
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 269 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 321
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 34 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 87
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 88 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 144
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+YT++
Sbjct: 145 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 204
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 205 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 261
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 262 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 314
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 45 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 98
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 99 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 155
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+YT++
Sbjct: 156 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 215
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 216 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 272
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 273 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 325
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 33 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 87 EKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+YT++
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 203
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 260
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 261 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 155/293 (52%), Gaps = 22/293 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP- 72
F + A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 33 FGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 73 -KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
KKD VY+ V + + ++++ R + Q L + + ++YQL R L Y+HS +
Sbjct: 87 EKKDV---VYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 126 LHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+YT++
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 203
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N + P
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFP 260
Query: 245 RCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 261 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 148/286 (51%), Gaps = 25/286 (8%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHM---EHENVIAIKDIIRPPKKDTFNDVY 81
T VAIKK+ I D R RE+++++ + H N++ ++ + D+Y
Sbjct: 47 TGMSVAIKKV------IQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY 100
Query: 82 --IVYELMDTDLHQIIRS--DQQLTDDHC--QYFLYQLLRGLKYVH--SASVLHRDLKPS 133
+V E + LH+ R+ +Q+ + FL+QL+R + +H S +V HRD+KP
Sbjct: 101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPH 160
Query: 134 NLLLN-ASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
N+L+N A LK+ DFG A+ S ++ Y+ +R+YRAPEL+ YT A+DIWSVGC
Sbjct: 161 NVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGC 220
Query: 193 ILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFA 252
I E+M EP+F G + QL I ++G P S LR N L + ++
Sbjct: 221 IFAEMMLGEPIFRGDNSAGQLHEIVRVLGCP---SREVLRKLNPSHTDVDLYNSKGIPWS 277
Query: 253 TRFPNKS----SGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
F + S A DLL +L + P +R+ EAL HPY LHD
Sbjct: 278 NVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 139/274 (50%), Gaps = 36/274 (13%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--------- 99
REI LLR ++H NVI+++ + V+++++ + DL II+ +
Sbjct: 67 REIALLRELKHPNVISLQKVFL---SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPV 123
Query: 100 QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD----LKIGDFGLARTTS 155
QL + LYQ+L G+ Y+H+ VLHRDLKP+N+L+ +KI D G AR +
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 183
Query: 156 ET----DFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF------- 204
+ VVT WYRAPELLL YT AIDIW++GCI E++T EP+F
Sbjct: 184 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDI 243
Query: 205 -PGKDYVH-QLRLITELIGSPDDASLGFLR-----SDNARRYVRQ-LPRCRKQQFATRFP 256
Y H QL I ++G P D ++ S + + R C ++ +
Sbjct: 244 KTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHK 303
Query: 257 NK-SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
K S A LL+K+L DP KRIT E+A++ PY
Sbjct: 304 VKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 154/303 (50%), Gaps = 38/303 (12%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG+Y ++ A+N E+V +K + N I REIK+L ++ N+I
Sbjct: 47 RGKYSEVF-----EAINITNNEKVVVKILKPVKKNKIK-----REIKILENLRGGPNIIT 96
Query: 65 IKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 123
+ DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 97 LADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 124 SVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 182
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 183 AAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLG 229
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 270
Query: 230 FLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 271 DILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 290 QSL 292
++
Sbjct: 325 YTV 327
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 44/283 (15%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHENVIAIKDIIRPPK 73
A +T ++VAIK I I AR EI++L+ + H +I IK+
Sbjct: 29 AFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 86
Query: 74 KDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
D YIV ELM+ +L + +++L + C+ + YQ+L ++Y+H ++HRDLKP
Sbjct: 87 ----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 142
Query: 133 SNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC--TEYTAAIDI 187
N+LL++ C +KI DFG ++ ET M T Y APE+L++ Y A+D
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
WS+G IL ++ P P ++ Q+ L ++ + ++ ++
Sbjct: 203 WSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TSGKYNFIPEV---- 243
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 244 -------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 44/283 (15%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHENVIAIKDIIRPPK 73
A +T ++VAIK I I AR EI++L+ + H +I IK+
Sbjct: 28 AFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 85
Query: 74 KDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
D YIV ELM+ +L + +++L + C+ + YQ+L ++Y+H ++HRDLKP
Sbjct: 86 ----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 141
Query: 133 SNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC--TEYTAAIDI 187
N+LL++ C +KI DFG ++ ET M T Y APE+L++ Y A+D
Sbjct: 142 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 201
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
WS+G IL ++ P P ++ Q+ L ++ + ++ ++
Sbjct: 202 WSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TSGKYNFIPEV---- 242
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 243 -------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 44/283 (15%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHENVIAIKDIIRPPK 73
A +T ++VAIK I I AR EI++L+ + H +I IK+
Sbjct: 35 AFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 92
Query: 74 KDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
D YIV ELM+ +L + +++L + C+ + YQ+L ++Y+H ++HRDLKP
Sbjct: 93 ----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 148
Query: 133 SNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC--TEYTAAIDI 187
N+LL++ C +KI DFG ++ ET M T Y APE+L++ Y A+D
Sbjct: 149 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 208
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
WS+G IL ++ P P ++ Q+ L ++ + ++ ++
Sbjct: 209 WSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TSGKYNFIPEV---- 249
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 250 -------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 44/283 (15%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHENVIAIKDIIRPPK 73
A +T ++VAIK I I AR EI++L+ + H +I IK+
Sbjct: 29 AFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 86
Query: 74 KDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
D YIV ELM+ +L + +++L + C+ + YQ+L ++Y+H ++HRDLKP
Sbjct: 87 ----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 142
Query: 133 SNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC--TEYTAAIDI 187
N+LL++ C +KI DFG ++ ET M T Y APE+L++ Y A+D
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
WS+G IL ++ P P ++ Q+ L ++ + ++ ++
Sbjct: 203 WSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TSGKYNFIPEV---- 243
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 244 -------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 44/283 (15%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHENVIAIKDIIRPPK 73
A +T ++VAIK I I AR EI++L+ + H +I IK+
Sbjct: 29 AFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 86
Query: 74 KDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
D YIV ELM+ +L + +++L + C+ + YQ+L ++Y+H ++HRDLKP
Sbjct: 87 ----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 142
Query: 133 SNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC--TEYTAAIDI 187
N+LL++ C +KI DFG ++ ET M T Y APE+L++ Y A+D
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
WS+G IL ++ P P ++ Q+ L ++ + ++ ++
Sbjct: 203 WSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TSGKYNFIPEV---- 243
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 244 -------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 141/283 (49%), Gaps = 44/283 (15%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHENVIAIKDIIRPPK 73
A +T ++VAI+ I I AR EI++L+ + H +I IK+
Sbjct: 168 AFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 225
Query: 74 KDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
D YIV ELM+ +L + +++L + C+ + YQ+L ++Y+H ++HRDLKP
Sbjct: 226 ----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 281
Query: 133 SNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC--TEYTAAIDI 187
N+LL++ C +KI DFG ++ ET M T Y APE+L++ Y A+D
Sbjct: 282 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 341
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
WS+G IL ++ P P ++ Q+ L ++ + ++ ++
Sbjct: 342 WSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TSGKYNFIPEV---- 382
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 383 -------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 141/283 (49%), Gaps = 44/283 (15%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHENVIAIKDIIRPPK 73
A +T ++VAI+ I I AR EI++L+ + H +I IK+
Sbjct: 154 AFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 211
Query: 74 KDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
D YIV ELM+ +L + +++L + C+ + YQ+L ++Y+H ++HRDLKP
Sbjct: 212 ----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 267
Query: 133 SNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC--TEYTAAIDI 187
N+LL++ C +KI DFG ++ ET M T Y APE+L++ Y A+D
Sbjct: 268 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 327
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
WS+G IL ++ P P ++ Q+ L ++ + ++ ++
Sbjct: 328 WSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TSGKYNFIPEV---- 368
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 369 -------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N+L++ L++ D+GLA V +R+++ PELL++
Sbjct: 147 CHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 321 HPYFYTV 327
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 134/241 (55%), Gaps = 21/241 (8%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + D ++ P T +V+E ++ TD Q+ Q LTD ++++Y+LL+ L Y
Sbjct: 94 NIIKLIDTVKDPVSKT---PALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDY 147
Query: 120 VHSASVLHRDLKPSNLLLN-ASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 148 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDY 207
Query: 179 TEYTAAIDIWSVGCILGE-IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRS---- 233
Y ++D+WS+GC+L I REP F G+D QL I +++G+ + G+L+
Sbjct: 208 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYLKKYHID 265
Query: 234 --DNARRYVRQLPRCRKQQFATRFPNK---SSGAVDLLEKMLVFDPNKRITVEEALRHPY 288
+ + Q R R + F N+ S A+DLL+K+L +D +R+T +EA+ HPY
Sbjct: 266 LDPHFNDILGQHSRKRWENF-IHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 324
Query: 289 L 289
Sbjct: 325 F 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 134/241 (55%), Gaps = 21/241 (8%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + D ++ P T +V+E ++ TD Q+ Q LTD ++++Y+LL+ L Y
Sbjct: 99 NIIKLIDTVKDPVSKT---PALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDY 152
Query: 120 VHSASVLHRDLKPSNLLLN-ASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 153 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDY 212
Query: 179 TEYTAAIDIWSVGCILGE-IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRS---- 233
Y ++D+WS+GC+L I REP F G+D QL I +++G+ + G+L+
Sbjct: 213 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYLKKYHID 270
Query: 234 --DNARRYVRQLPRCRKQQFATRFPNK---SSGAVDLLEKMLVFDPNKRITVEEALRHPY 288
+ + Q R R + F N+ S A+DLL+K+L +D +R+T +EA+ HPY
Sbjct: 271 LDPHFNDILGQHSRKRWENF-IHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 329
Query: 289 L 289
Sbjct: 330 F 330
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 131/270 (48%), Gaps = 38/270 (14%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T++E A+K I A D LRE++LL+ ++H N++ + +I+ + YIV
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-----SSFYIVG 100
Query: 85 EL-MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS--- 140
EL +L I ++ ++ + Q+ G+ Y+H +++HRDLKP N+LL +
Sbjct: 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKD 160
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTR 200
CD+KI DFGL+ + M + + T +Y APE+L Y D+WS G IL +++
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSG 218
Query: 201 EPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSS 260
P F GK+ L+ + +Y LP+ R S
Sbjct: 219 TPPFYGKNEYDILKRV------------------ETGKYAFDLPQWR---------TISD 251
Query: 261 GAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
A DL+ KML F P+ RIT + L HP++Q
Sbjct: 252 DAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 91 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 144
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 145 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 204
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 264
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 265 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 318
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 319 HPYFYTV 325
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 321 HPYFYTV 327
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 321 HPYFYTV 327
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 38/270 (14%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T++E A+K I A D LRE++LL+ ++H N++ + +I+ + YIV
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-----SSFYIVG 100
Query: 85 EL-MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS--- 140
EL +L I ++ ++ + Q+ G+ Y+H +++HRDLKP N+LL +
Sbjct: 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKD 160
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTR 200
CD+KI DFGL+ + M + + T +Y APE+L Y D+WS G IL +++
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSG 218
Query: 201 EPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSS 260
P F GK+ L+ +Y LP+ R S
Sbjct: 219 TPPFYGKN------------------EYDILKRVETGKYAFDLPQWR---------TISD 251
Query: 261 GAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
A DL+ KML F P+ RIT + L HP++Q
Sbjct: 252 DAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 38/270 (14%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T++E A+K I A D LRE++LL+ ++H N++ + +I+ + YIV
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-----SSFYIVG 100
Query: 85 EL-MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS--- 140
EL +L I ++ ++ + Q+ G+ Y+H +++HRDLKP N+LL +
Sbjct: 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKD 160
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTR 200
CD+KI DFGL+ + M + + T +Y APE+L Y D+WS G IL +++
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSG 218
Query: 201 EPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSS 260
P F GK+ L+ +Y LP+ R S
Sbjct: 219 TPPFYGKN------------------EYDILKRVETGKYAFDLPQWR---------TISD 251
Query: 261 GAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
A DL+ KML F P+ RIT + L HP++Q
Sbjct: 252 DAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 321 HPYFYTV 327
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 321 HPYFYTV 327
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 321 HPYFYTV 327
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 321 HPYFYTV 327
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 321 HPYFYTV 327
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 92 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 145
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 205
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 266 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 319
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 320 HPYFYTV 326
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 92 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 145
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 205
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 266 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 319
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 320 HPYFYTV 326
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 98 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 151
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 152 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 211
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 212 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 271
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 272 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 325
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 326 HPYFYTV 332
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 27/247 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQL---RQTLTDYDIRFYMYEILKALDY 146
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 286 HPYLQSL 292
HPY ++
Sbjct: 321 HPYFYTV 327
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 27/244 (11%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 119
N+I + DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 120 VHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 178
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 179 TEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------D 225
Y ++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+ ++R+ + Q S A+D L+K+L +D R+T EA+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 286 HPYL 289
HPY
Sbjct: 321 HPYF 324
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 25/250 (10%)
Query: 57 MEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRG 116
M N++ + DI+R T + +++E ++ +++ LTD +Y++Y+LL+
Sbjct: 83 MGGPNIVKLLDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKA 137
Query: 117 LKYVHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 175
L Y HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL
Sbjct: 138 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 197
Query: 176 LNCTEYTAAIDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD---------- 224
++ +Y ++D+WS+GC+ G I +EP F G D QL I +++G+
Sbjct: 198 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRI 257
Query: 225 --DASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEE 282
D L L ++R+ + Q S A+D L+K+L +D +R+T E
Sbjct: 258 ELDPQLEALVGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALE 311
Query: 283 ALRHPYLQSL 292
A+ HPY Q +
Sbjct: 312 AMTHPYFQQV 321
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 25/246 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 120
N++ + DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYC 141
Query: 121 HSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 179
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 180 EYTAAIDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DA 226
+Y ++D+WS+GC+ G I +EP F G D QL I +++G+ D
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 227 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 286
L L ++R+ + Q S A+D L+K+L +D +R+T EA+ H
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 287 PYLQSL 292
PY Q +
Sbjct: 316 PYFQQV 321
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 25/246 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 120
N++ + DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYC 141
Query: 121 HSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 179
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 180 EYTAAIDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DA 226
+Y ++D+WS+GC+ G I +EP F G D QL I +++G+ D
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 227 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 286
L L ++R+ + Q S A+D L+K+L +D +R+T EA+ H
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 287 PYLQSL 292
PY Q +
Sbjct: 316 PYFQQV 321
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 25/246 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 120
N++ + DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y
Sbjct: 88 NIVKLLDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYC 142
Query: 121 HSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 179
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 180 EYTAAIDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DA 226
+Y ++D+WS+GC+ G I +EP F G D QL I +++G+ D
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 262
Query: 227 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 286
L L ++R+ + Q S A+D L+K+L +D +R+T EA+ H
Sbjct: 263 QLEALVGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTH 316
Query: 287 PYLQSL 292
PY Q +
Sbjct: 317 PYFQQV 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 25/246 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 120
N++ + DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYC 141
Query: 121 HSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 179
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 180 EYTAAIDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DA 226
+Y ++D+WS+GC+ G I +EP F G D QL I +++G+ D
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 227 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 286
L L ++R+ + Q S A+D L+K+L +D +R+T EA+ H
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 287 PYLQSL 292
PY Q +
Sbjct: 316 PYFQQV 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 25/246 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 120
N++ + DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y
Sbjct: 89 NIVKLLDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYC 143
Query: 121 HSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 179
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 144 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 203
Query: 180 EYTAAIDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DA 226
+Y ++D+WS+GC+ G I +EP F G D QL I +++G+ D
Sbjct: 204 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 263
Query: 227 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 286
L L ++R+ + Q S A+D L+K+L +D +R+T EA+ H
Sbjct: 264 QLEALVGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTH 317
Query: 287 PYLQSL 292
PY Q +
Sbjct: 318 PYFQQV 323
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 25/246 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 120
N++ + DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYC 141
Query: 121 HSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 179
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 180 EYTAAIDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DA 226
+Y ++D+WS+GC+ G I +EP F G D QL I +++G+ D
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 227 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 286
L L ++R+ + Q S A+D L+K+L +D +R+T EA+ H
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 287 PYLQSL 292
PY Q +
Sbjct: 316 PYFQQV 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 25/246 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 120
N++ + DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y
Sbjct: 88 NIVKLLDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYC 142
Query: 121 HSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 179
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 180 EYTAAIDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DA 226
+Y ++D+WS+GC+ G I +EP F G D QL I +++G+ D
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 262
Query: 227 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 286
L L ++R+ + Q S A+D L+K+L +D +R+T EA+ H
Sbjct: 263 QLEALVGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTH 316
Query: 287 PYLQSL 292
PY Q +
Sbjct: 317 PYFQQV 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 25/246 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 120
N++ + DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYC 141
Query: 121 HSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 179
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 180 EYTAAIDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DA 226
+Y ++D+WS+GC+ G I +EP F G D QL I +++G+ D
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 227 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 286
L L ++R+ + Q S A+D L+K+L +D +R+T EA+ H
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 287 PYLQSL 292
PY Q +
Sbjct: 316 PYFQQV 321
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 25/246 (10%)
Query: 61 NVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 120
N++ + DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y
Sbjct: 108 NIVKLLDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYC 162
Query: 121 HSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 179
HS ++HRD+KP N++++ L++ D+GLA V +R+++ PELL++
Sbjct: 163 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 222
Query: 180 EYTAAIDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DA 226
+Y ++D+WS+GC+ G I +EP F G D QL I +++G+ D
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDP 282
Query: 227 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 286
L L ++R+ + Q S A+D L+K+L +D +R+T EA+ H
Sbjct: 283 QLEALVGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTH 336
Query: 287 PYLQSL 292
PY Q +
Sbjct: 337 PYFQQV 342
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 1 MSVKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE 60
+ V +G + ++ A + + + VA+K + N R+ EI++L H+ +
Sbjct: 102 LKVIGKGSFGQVV-----KAYDHKVHQHVALKMVRNEKRF---HRQAAEEIRILEHLRKQ 153
Query: 61 NVIAIKDIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGL 117
+ ++I + TF N + + +EL+ +L+++I+ + Q + + F + +L+ L
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 118 KYVHSASVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 175
+H ++H DLKP N+LL +K+ DFG + E + + +R+YRAPE++
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVI 271
Query: 176 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD----DAS---L 228
L Y ID+WS+GCIL E++T PL PG+D QL + EL+G P DAS
Sbjct: 272 LG-ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAK 330
Query: 229 GFLRSDNARRY-----------VRQLPRCRKQQF-----ATRFPNKSSGA-----VDLLE 267
F+ RY V R R+ + + + N G +D L+
Sbjct: 331 NFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLK 390
Query: 268 KMLVFDPNKRITVEEALRHPYLQ 290
+ L +DP R+T +ALRHP+L+
Sbjct: 391 QCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 1 MSVKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE 60
+ V +G + ++ A + + + VA+K + N R+ EI++L H+ +
Sbjct: 102 LKVIGKGSFGQVV-----KAYDHKVHQHVALKMVRNEKRF---HRQAAEEIRILEHLRKQ 153
Query: 61 NVIAIKDIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGL 117
+ ++I + TF N + + +EL+ +L+++I+ + Q + + F + +L+ L
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 118 KYVHSASVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 175
+H ++H DLKP N+LL +K+ DFG + E + + +R+YRAPE++
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVI 271
Query: 176 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD----DAS---L 228
L Y ID+WS+GCIL E++T PL PG+D QL + EL+G P DAS
Sbjct: 272 LG-ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAK 330
Query: 229 GFLRSDNARRY-----------VRQLPRCRKQQF-----ATRFPNKSSGA-----VDLLE 267
F+ RY V R R+ + + + N G +D L+
Sbjct: 331 NFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLK 390
Query: 268 KMLVFDPNKRITVEEALRHPYLQ 290
+ L +DP R+T +ALRHP+L+
Sbjct: 391 QCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 1 MSVKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE 60
+ V +G + ++ A + + + VA+K + N R+ EI++L H+ +
Sbjct: 102 LKVIGKGXFGQVV-----KAYDHKVHQHVALKMVRNEKRF---HRQAAEEIRILEHLRKQ 153
Query: 61 NVIAIKDIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGL 117
+ ++I + TF N + + +EL+ +L+++I+ + Q + + F + +L+ L
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 118 KYVHSASVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 175
+H ++H DLKP N+LL +K+ DFG + E + + +R+YRAPE++
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYXXIQSRFYRAPEVI 271
Query: 176 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD----DAS---L 228
L Y ID+WS+GCIL E++T PL PG+D QL + EL+G P DAS
Sbjct: 272 LG-ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAK 330
Query: 229 GFLRSDNARRY-----------VRQLPRCRKQQF-----ATRFPNKSSGA-----VDLLE 267
F+ RY V R R+ + + + N G +D L+
Sbjct: 331 NFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLK 390
Query: 268 KMLVFDPNKRITVEEALRHPYLQ 290
+ L +DP R+T +ALRHP+L+
Sbjct: 391 QCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 39/272 (14%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDAR-RTLREIKLLRHMEHENVIAIKDIIRPPKKDTFN 78
A + +T+++VA+K I D R REI L+ + H ++I + D+I P
Sbjct: 28 ATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP-----T 82
Query: 79 DVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
D+ +V E +L I +++T+D + F Q++ ++Y H ++HRDLKP NLLL+
Sbjct: 83 DIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD 142
Query: 139 ASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
+ ++KI DFGL+ ++ +F+ + Y APE++ +D+WS G +L ++
Sbjct: 143 DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVML 202
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN- 257
V +L E I + + N+ YV P+
Sbjct: 203 -----------VGRLPFDDEFIPN-------LFKKVNSCVYV--------------MPDF 230
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
S GA L+ +M+V DP +RIT++E R P+
Sbjct: 231 LSPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQY 108
EI +LR ++HEN++A++DI P N +Y+V +L+ +L I T+
Sbjct: 70 EIAVLRKIKHENIVALEDIYESP-----NHLYLVMQLVSGGELFDRIVEKGFYTEKDAST 124
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLL---NASCDLKIGDFGLARTTSETDFMTEYVV 165
+ Q+L + Y+H ++HRDLKP NLL + + I DFGL++ + D M+
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACG 184
Query: 166 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDD 225
T Y APE+L Y+ A+D WS+G I ++ P F
Sbjct: 185 TPGYVAPEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPF--------------------- 222
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+N + Q+ + + + + + S A D + ++ DPNKR T E+A R
Sbjct: 223 ------YDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAAR 276
Query: 286 HPYLQSLHDLN 296
HP++ LN
Sbjct: 277 HPWIAGDTALN 287
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 38/272 (13%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTF-NDVYIV 83
T E AIK I + + L E+ +L+ ++H N++ + D + + Y
Sbjct: 61 THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120
Query: 84 YELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS--- 140
EL D +H++ + + + Q+L G+ Y+H +++HRDLKP NLLL +
Sbjct: 121 GELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKD 175
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTR 200
+KI DFGL+ M E + T +Y APE+L +Y D+WS+G IL ++
Sbjct: 176 ALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK--KYDEKCDVWSIGVILFILLAG 233
Query: 201 EPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSS 260
P F G+ LR + + +Y P + N S
Sbjct: 234 YPPFGGQTDQEILRKVEK------------------GKYTFDSPE---------WKNVSE 266
Query: 261 GAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 292
GA DL+++ML FD +RI+ ++AL HP+++ +
Sbjct: 267 GAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 25 TREEVAIKKIGN-AFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTF---NDV 80
T +E A+K I D LRE++LL+ ++H N++ + + K F +V
Sbjct: 74 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYFYLVGEV 131
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
Y EL D I S ++ ++ + Q+L G+ Y+H ++HRDLKP NLLL +
Sbjct: 132 YTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK 186
Query: 141 ---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+++I DFGL+ + M + + T +Y APE+L Y D+WS G IL +
Sbjct: 187 SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYIL 244
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
++ P F G + L+ + + +Y +LP+ +K
Sbjct: 245 LSGCPPFNGANEYDILKKVEK------------------GKYTFELPQWKKV-------- 278
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
S A DL+ KML + P+ RI+ +AL H ++Q+
Sbjct: 279 -SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 311
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 25 TREEVAIKKIGN-AFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTF---NDV 80
T +E A+K I D LRE++LL+ ++H N++ + + K F +V
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYFYLVGEV 107
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
Y EL D I S ++ ++ + Q+L G+ Y+H ++HRDLKP NLLL +
Sbjct: 108 YTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK 162
Query: 141 ---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+++I DFGL+ + M + + T +Y APE+L Y D+WS G IL +
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYIL 220
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
++ P F G + L+ + + +Y +LP+ +K
Sbjct: 221 LSGCPPFNGANEYDILKKVEK------------------GKYTFELPQWKKV-------- 254
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
S A DL+ KML + P+ RI+ +AL H ++Q+
Sbjct: 255 -SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 287
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 25 TREEVAIKKIGN-AFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTF---NDV 80
T +E A+K I D LRE++LL+ ++H N++ + + K F +V
Sbjct: 73 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYFYLVGEV 130
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
Y EL D I S ++ ++ + Q+L G+ Y+H ++HRDLKP NLLL +
Sbjct: 131 YTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK 185
Query: 141 ---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+++I DFGL+ + M + + T +Y APE+L Y D+WS G IL +
Sbjct: 186 SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYIL 243
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
++ P F G + L+ + + +Y +LP+ +K
Sbjct: 244 LSGCPPFNGANEYDILKKVEK------------------GKYTFELPQWKKV-------- 277
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
S A DL+ KML + P+ RI+ +AL H ++Q+
Sbjct: 278 -SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 310
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 128/274 (46%), Gaps = 43/274 (15%)
Query: 25 TREEVAIKKIGN-AFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTF---NDV 80
T +E A+K I D LRE++LL+ ++H N++ + + K F +V
Sbjct: 56 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYFYLVGEV 113
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
Y EL D I S ++ ++ + Q+L G+ Y+H ++HRDLKP NLLL +
Sbjct: 114 YTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK 168
Query: 141 ---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+++I DFGL+ + M + + T +Y APE+L Y D+WS G IL +
Sbjct: 169 SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYIL 226
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
++ P F G + L+ +Y +LP+ +K
Sbjct: 227 LSGCPPFNGAN------------------EYDILKKVEKGKYTFELPQWKKV-------- 260
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
S A DL+ KML + P+ RI+ +AL H ++Q+
Sbjct: 261 -SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 37/267 (13%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDAR-RTLREIKLLRHMEHENVIAIKDIIRPPKKDTFN 78
A ++ T ++VA+K I D + R REI LR + H ++I + D+I+ + +
Sbjct: 23 AYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SKD 77
Query: 79 DVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
++ +V E +L I ++++ + F Q++ ++Y H ++HRDLKP NLLL+
Sbjct: 78 EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD 137
Query: 139 ASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
++KI DFGL+ ++ +F+ + Y APE++ +D+WS G IL ++
Sbjct: 138 EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 197
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK 258
R F DD S+ L N V LP+
Sbjct: 198 CRRLPF-------------------DDESIPVLFK-NISNGVYTLPKFL----------- 226
Query: 259 SSGAVDLLEKMLVFDPNKRITVEEALR 285
S GA L+++ML+ +P RI++ E ++
Sbjct: 227 SPGAAGLIKRMLIVNPLNRISIHEIMQ 253
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 37/272 (13%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDAR-RTLREIKLLRHMEHENVIAIKDIIRPPKKDTFN 78
A ++ T ++VA+K I D + R REI LR + H ++I + D+I+ + +
Sbjct: 27 AYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SKD 81
Query: 79 DVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
++ +V E +L I ++++ + F Q++ ++Y H ++HRDLKP NLLL+
Sbjct: 82 EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD 141
Query: 139 ASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
++KI DFGL+ ++ +F+ + Y APE++ +D+WS G IL ++
Sbjct: 142 EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 201
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK 258
R F DD S+ L N V LP+
Sbjct: 202 CRRLPF-------------------DDESIPVLFK-NISNGVYTLPKFL----------- 230
Query: 259 SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
S GA L+++ML+ +P RI++ E ++ + +
Sbjct: 231 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 37/272 (13%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDAR-RTLREIKLLRHMEHENVIAIKDIIRPPKKDTFN 78
A ++ T ++VA+K I D + R REI LR + H ++I + D+I+ + +
Sbjct: 33 AYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SKD 87
Query: 79 DVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
++ +V E +L I ++++ + F Q++ ++Y H ++HRDLKP NLLL+
Sbjct: 88 EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD 147
Query: 139 ASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
++KI DFGL+ ++ +F+ + Y APE++ +D+WS G IL ++
Sbjct: 148 EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 207
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK 258
R F DD S+ L N V LP+
Sbjct: 208 CRRLPF-------------------DDESIPVLFK-NISNGVYTLPKFL----------- 236
Query: 259 SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
S GA L+++ML+ +P RI++ E ++ + +
Sbjct: 237 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 37/272 (13%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDAR-RTLREIKLLRHMEHENVIAIKDIIRPPKKDTFN 78
A ++ T ++VA+K I D + R REI LR + H ++I + D+I+ + +
Sbjct: 32 AYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SKD 86
Query: 79 DVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
++ +V E +L I ++++ + F Q++ ++Y H ++HRDLKP NLLL+
Sbjct: 87 EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD 146
Query: 139 ASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
++KI DFGL+ ++ +F+ + Y APE++ +D+WS G IL ++
Sbjct: 147 EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 206
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK 258
R F DD S+ L N V LP+
Sbjct: 207 CRRLPF-------------------DDESIPVLFK-NISNGVYTLPKFL----------- 235
Query: 259 SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
S GA L+++ML+ +P RI++ E ++ + +
Sbjct: 236 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 125/288 (43%), Gaps = 56/288 (19%)
Query: 40 NIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ 99
N D T R +++L EH I I V+EL+ + I+ +
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICI-----------------VFELLGLSTYDFIKENG 111
Query: 100 QLTD--DHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS----------------- 140
L DH + YQ+ + + ++HS + H DLKP N+L S
Sbjct: 112 FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171
Query: 141 --CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
D+K+ DFG A T + + + V TR YRAPE++L ++ D+WS+GCIL E
Sbjct: 172 INPDIKVVDFGSA--TYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYY 228
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRS--------------DNARRYVRQLP 244
+FP D L ++ ++G + R +A RYV +
Sbjct: 229 LGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC 288
Query: 245 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 292
+ K+ F + DL++KML +DP KRIT+ EAL+HP+ L
Sbjct: 289 KPLKE-FMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL 335
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 124/288 (43%), Gaps = 56/288 (19%)
Query: 40 NIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ 99
N D T R +++L EH I I V+EL+ + I+ +
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICI-----------------VFELLGLSTYDFIKENG 111
Query: 100 QLTD--DHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS----------------- 140
L DH + YQ+ + + ++HS + H DLKP N+L S
Sbjct: 112 FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171
Query: 141 --CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
D+K+ DFG A T + + + V R YRAPE++L ++ D+WS+GCIL E
Sbjct: 172 INPDIKVVDFGSA--TYDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYY 228
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRS--------------DNARRYVRQLP 244
+FP D L ++ ++G + R +A RYV +
Sbjct: 229 LGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC 288
Query: 245 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 292
+ K+ F + DL++KML +DP KRIT+ EAL+HP+ L
Sbjct: 289 KPLKE-FMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL 335
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 43/274 (15%)
Query: 25 TREEVAIKKIGN-AFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTF---NDV 80
T +E A+K I D LRE++LL+ ++H N+ + + K F +V
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFED--KGYFYLVGEV 107
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
Y EL D I S ++ ++ + Q+L G+ Y H ++HRDLKP NLLL +
Sbjct: 108 YTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESK 162
Query: 141 ---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+++I DFGL+ + + + T +Y APE+L Y D+WS G IL +
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYIL 220
Query: 198 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 257
++ P F G + L+ + + +Y +LP+ +K
Sbjct: 221 LSGCPPFNGANEYDILKKVEK------------------GKYTFELPQWKKV-------- 254
Query: 258 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
S A DL+ K L + P+ RI+ +AL H ++Q+
Sbjct: 255 -SESAKDLIRKXLTYVPSXRISARDALDHEWIQT 287
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 138/280 (49%), Gaps = 37/280 (13%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
F + V+ T E A K I + D ++ RE ++ R ++H N++ + D I +
Sbjct: 18 FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI---Q 74
Query: 74 KDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
+++F+ Y+V++L+ +L + I + + ++ + + Q+L + Y HS ++HR+LKP
Sbjct: 75 EESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 132
Query: 133 SNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLL + +K+ DFGLA ++++ + T Y +PE+L Y+ +DIW+
Sbjct: 133 ENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWA 191
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
G IL ++ P F +D Q RL ++ A Y P
Sbjct: 192 CGVILYILLVGYPPFWDED---QHRLYAQI---------------KAGAYDYPSP----- 228
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
++ T P S L++ ML +P KRIT ++AL+ P++
Sbjct: 229 EWDTVTPEAKS----LIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 138/280 (49%), Gaps = 37/280 (13%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
F + V+ T E A K I + D ++ RE ++ R ++H N++ + D I +
Sbjct: 19 FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI---Q 75
Query: 74 KDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
+++F+ Y+V++L+ +L + I + + ++ + + Q+L + Y HS ++HR+LKP
Sbjct: 76 EESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 133
Query: 133 SNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLL + +K+ DFGLA ++++ + T Y +PE+L Y+ +DIW+
Sbjct: 134 ENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWA 192
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
G IL ++ P F +D Q RL ++ A Y P
Sbjct: 193 CGVILYILLVGYPPFWDED---QHRLYAQI---------------KAGAYDYPSP----- 229
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
++ T P S L++ ML +P KRIT ++AL+ P++
Sbjct: 230 EWDTVTPEAKS----LIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 138/280 (49%), Gaps = 37/280 (13%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
F + V+ T E A K I + D ++ RE ++ R ++H N++ + D I+
Sbjct: 19 FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ--- 75
Query: 74 KDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
+++F+ Y+V++L+ +L + I + + ++ + + Q+L + Y HS ++HR+LKP
Sbjct: 76 EESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 133
Query: 133 SNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWS 189
NLLL + +K+ DFGLA ++++ + T Y +PE+L Y+ +DIW+
Sbjct: 134 ENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWA 192
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
G IL ++ P F +D Q RL ++ A Y P
Sbjct: 193 CGVILYILLVGYPPFWDED---QHRLYAQI---------------KAGAYDYPSP----- 229
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
++ T P S L++ ML +P KRIT ++AL+ P++
Sbjct: 230 EWDTVTPEAKS----LIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 141/289 (48%), Gaps = 37/289 (12%)
Query: 5 LRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIA 64
++ E F + V+ T E A K I + D ++ RE ++ R ++H N++
Sbjct: 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVR 92
Query: 65 IKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 123
+ D I ++++F+ Y+V++L+ +L + I + + ++ + + Q+L + Y HS
Sbjct: 93 LHDSI---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 147
Query: 124 SVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 180
++HR+LKP NLLL + +K+ DFGLA ++++ + T Y +PE+L
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-DP 206
Query: 181 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 240
Y+ +DIW+ G IL ++ P F +D Q RL ++ A Y
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDED---QHRLYAQI---------------KAGAYD 248
Query: 241 RQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
P ++ T P S L++ ML +P KRIT ++AL+ P++
Sbjct: 249 YPSP-----EWDTVTPEAKS----LIDSMLTVNPKKRITADQALKVPWI 288
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 59/333 (17%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGN--AFDNIIDARRTLREIKLLRHMEHENVI 63
+G + ++ A + +E VAIK I N AF N + E++LL M +
Sbjct: 64 KGSFGQVV-----KAYDRVEQEWVAIKIIKNKKAFLN-----QAQIEVRLLELMNKHDTE 113
Query: 64 AIKDIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYV 120
I+ + F N + +V+E++ +L+ ++R+ + ++ + + F Q+ L ++
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 121 HSA--SVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL 176
+ S++H DLKP N+LL +KI DFG + + + + + +R+YR+PE+LL
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY--QXIQSRFYRSPEVLL 231
Query: 177 NCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNA 236
Y AID+WS+GCIL E+ T EPLF G + V Q+ I E++G P L ++ A
Sbjct: 232 G-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD--QAPKA 288
Query: 237 RRYVRQLP---------RCRKQQF-------------------ATRFPNKSSGAV----- 263
R++ +LP + K+++ R +S V
Sbjct: 289 RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLK 348
Query: 264 --DLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
DL+ +ML +DP RI AL+H + + D
Sbjct: 349 FKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 160/336 (47%), Gaps = 65/336 (19%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGN--AFDNIIDARRTLREIKLLRHMEHENVI 63
+G + ++ A + +E VAIK I N AF N + E++LL M +
Sbjct: 64 KGSFGQVV-----KAYDRVEQEWVAIKIIKNKKAFLN-----QAQIEVRLLELMNKHDTE 113
Query: 64 AIKDIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYV 120
I+ + F N + +V+E++ +L+ ++R+ + ++ + + F Q+ L ++
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 121 HSA--SVLHRDLKPSNLLLNASCD-----LKIGDFGLARTTSETDFMTEYVVTRWYRAPE 173
+ S++H DLKP N+LL C+ +KI DFG + + + + + +R+YR+PE
Sbjct: 174 ATPELSIIHCDLKPENILL---CNPKRXAIKIVDFGSSCQLGQRIY--QXIQSRFYRSPE 228
Query: 174 LLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRS 233
+LL Y AID+WS+GCIL E+ T EPLF G + V Q+ I E++G P L ++
Sbjct: 229 VLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD--QA 285
Query: 234 DNARRYVRQLP---------RCRKQQF-------------------ATRFPNKSSGAV-- 263
AR++ +LP + K+++ R +S V
Sbjct: 286 PKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVAD 345
Query: 264 -----DLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
DL+ +ML +DP RI AL+H + + D
Sbjct: 346 YLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 38/255 (14%)
Query: 42 IDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQ 100
+D + EI +L + H N+I +K+I P ++ +V EL+ +L I
Sbjct: 90 VDKKIVRTEIGVLLRLSHPNIIKLKEIFETP-----TEISLVLELVTGGELFDRIVEKGY 144
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSET 157
++ + Q+L + Y+H ++HRDLKP NLL LKI DFGL++
Sbjct: 145 YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204
Query: 158 DFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLI 216
M T Y APE+L C Y +D+WSVG I ++ EP +
Sbjct: 205 VLMKTVCGTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFY------------ 251
Query: 217 TELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNK 276
D+ F+ R++ C + + S A DL+ K++V DP K
Sbjct: 252 -------DERGDQFM--------FRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKK 296
Query: 277 RITVEEALRHPYLQS 291
R+T +AL+HP++
Sbjct: 297 RLTTFQALQHPWVTG 311
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 59/333 (17%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGN--AFDNIIDARRTLREIKLLRHMEHENVI 63
+G + ++ A + +E VAIK I N AF N + E++LL M +
Sbjct: 45 KGSFGQVV-----KAYDRVEQEWVAIKIIKNKKAFLN-----QAQIEVRLLELMNKHDTE 94
Query: 64 AIKDIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYV 120
I+ + F N + +V+E++ +L+ ++R+ + ++ + + F Q+ L ++
Sbjct: 95 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 154
Query: 121 HSA--SVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL 176
+ S++H DLKP N+LL +KI DFG + + + + + +R+YR+PE+LL
Sbjct: 155 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY--QXIQSRFYRSPEVLL 212
Query: 177 NCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNA 236
Y AID+WS+GCIL E+ T EPLF G + V Q+ I E++G P L ++ A
Sbjct: 213 G-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD--QAPKA 269
Query: 237 RRYVRQLP---------RCRKQQF-------------------ATRFPNKSSGAV----- 263
R++ +LP + K+++ R +S V
Sbjct: 270 RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLK 329
Query: 264 --DLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
DL+ +ML +DP RI AL+H + + D
Sbjct: 330 FKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 362
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 38/281 (13%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
F + V +E A K I + D ++ RE ++ R ++H N++ + D I
Sbjct: 44 FSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI---S 100
Query: 74 KDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
++ F+ Y+V++L+ +L + I + + ++ + ++Q+L + ++H ++HRDLKP
Sbjct: 101 EEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKP 158
Query: 133 SNLLLNASCD---LKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
NLLL + C +K+ DFGLA E + T Y +PE+L Y +DIW
Sbjct: 159 ENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRK-DPYGKPVDIW 217
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+ G IL ++ P F +D Q +L ++ D P
Sbjct: 218 ACGVILYILLVGYPPFWDED---QHKLYQQIKAGAYD-----------------FP---S 254
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
++ T P A +L+ +ML +P KRIT ++AL+HP++
Sbjct: 255 PEWDTVTPE----AKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 52/287 (18%)
Query: 21 VNSETREEVAIKKI----GNAF--DNIIDARR-TLREIKLLRHME-HENVIAIKDIIRPP 72
++ T +E A+K I G +F + + + R TL+E+ +LR + H N+I +KD
Sbjct: 37 IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY--- 93
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
+ +TF ++V++LM +L + L++ + + LL + +H +++HRDLK
Sbjct: 94 ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLK 151
Query: 132 PSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL-----NCTEYTAAID 186
P N+LL+ ++K+ DFG + + + E T Y APE++ N Y +D
Sbjct: 152 PENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITE---LIGSPDDASLGFLRSDNARRYVRQL 243
+WS G I+ ++ P F + + LR+I GSP+
Sbjct: 212 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE------------------- 252
Query: 244 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ + S DL+ + LV P KR T EEAL HP+ Q
Sbjct: 253 -----------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 9 YDDI---IFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
Y+DI F + V T E A K I + D ++ RE ++ R ++H N++ +
Sbjct: 9 YEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRL 68
Query: 66 KDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 124
D I ++ F+ Y+V++L+ +L + I + + ++ + + Q+L + + H
Sbjct: 69 HDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 125 VLHRDLKPSNLLLNASCD---LKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTE 180
V+HRDLKP NLLL + C +K+ DFGLA + + T Y +PE+L
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK-EA 182
Query: 181 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 240
Y +DIW+ G IL ++ P F +D Q +L ++ D
Sbjct: 183 YGKPVDIWACGVILYILLVGYPPFWDED---QHKLYQQIKAGAYD--------------- 224
Query: 241 RQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
P ++ T P A +L+ +ML +P KRIT EAL+HP++
Sbjct: 225 --FP---SPEWDTVTPE----AKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 52/287 (18%)
Query: 21 VNSETREEVAIKKI----GNAF--DNIIDARR-TLREIKLLRHME-HENVIAIKDIIRPP 72
++ T +E A+K I G +F + + + R TL+E+ +LR + H N+I +KD
Sbjct: 24 IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY--- 80
Query: 73 KKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
+ +TF ++V++LM +L + L++ + + LL + +H +++HRDLK
Sbjct: 81 ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLK 138
Query: 132 PSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL-----NCTEYTAAID 186
P N+LL+ ++K+ DFG + + + E T Y APE++ N Y +D
Sbjct: 139 PENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVD 198
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITE---LIGSPDDASLGFLRSDNARRYVRQL 243
+WS G I+ ++ P F + + LR+I GSP+
Sbjct: 199 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE------------------- 239
Query: 244 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ + S DL+ + LV P KR T EEAL HP+ Q
Sbjct: 240 -----------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 123/253 (48%), Gaps = 43/253 (16%)
Query: 47 TLREIKLLRHME-HENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDD 104
T RE +LR + H ++I + D ++ + +++V++LM +L + L++
Sbjct: 146 TRRETHILRQVAGHPHIITLID-----SYESSSFMFLVFDLMRKGELFDYLTEKVALSEK 200
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
+ + LL + ++H+ +++HRDLKP N+LL+ + +++ DFG + + + E
Sbjct: 201 ETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC 260
Query: 165 VTRWYRAPELLLNCT------EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITE 218
T Y APE+L C+ Y +D+W+ G IL ++ P F + + LR+I E
Sbjct: 261 GTPGYLAPEIL-KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME 319
Query: 219 LIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFAT-RFPNKSSGAVDLLEKMLVFDPNKR 277
+ QF++ + ++SS DL+ ++L DP R
Sbjct: 320 ----------------------------GQYQFSSPEWDDRSSTVKDLISRLLQVDPEAR 351
Query: 278 ITVEEALRHPYLQ 290
+T E+AL+HP+ +
Sbjct: 352 LTAEQALQHPFFE 364
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 45/277 (16%)
Query: 21 VNSETREEVAIKKIGNAFDNIIDARRTLREIK-LLRHMEHENVIAIKDIIRPPKKDTFND 79
++ T E A+K I + R EI+ LLR+ +H N+I +KD+ D
Sbjct: 42 IHKATNMEFAVKIIDKS------KRDPTEEIEILLRYGQHPNIITLKDVY-----DDGKY 90
Query: 80 VYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL- 136
VY+V ELM L +I+R + ++ L+ + + ++Y+H+ V+HRDLKPSN+L
Sbjct: 91 VYVVTELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILY 149
Query: 137 LNASCD---LKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
++ S + ++I DFG A+ +E + T + APE +L Y AA DIWS+G
Sbjct: 150 VDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VLERQGYDAACDIWSLGV 208
Query: 193 ILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFA 252
+L ++T T PDD L + ++
Sbjct: 209 LLYTMLTG---------------YTPFANGPDDTPEEILARIGSGKFSLS---------G 244
Query: 253 TRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
+ + S A DL+ KML DP++R+T LRHP++
Sbjct: 245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 140/310 (45%), Gaps = 49/310 (15%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFN--- 78
++ + +VA+K I N AR + +K ++ + EN + D FN
Sbjct: 41 HARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLM-----SDWFNFHG 95
Query: 79 DVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+ I +EL+ + + ++ + Q H ++ YQL L+++H + H DLKP N+L
Sbjct: 96 HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENIL 155
Query: 137 L-----------NASCD--------LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 177
+ SC+ +++ DFG A T + + T V TR YR PE++L
Sbjct: 156 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHHTTIVATRHYRPPEVILE 213
Query: 178 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASL--------- 228
+ D+WS+GCIL E LF + L ++ +++G +
Sbjct: 214 LG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYF 272
Query: 229 ---GFLRSDNAR--RYVRQLPRCRK-QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEE 282
G + +N+ RYV++ C+ + + + + DL+ +ML FDP +RIT+ E
Sbjct: 273 YKGGLVWDENSSDGRYVKE--NCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE 330
Query: 283 ALRHPYLQSL 292
AL HP+ L
Sbjct: 331 ALLHPFFAGL 340
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 140/310 (45%), Gaps = 49/310 (15%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFN--- 78
++ + +VA+K I N AR + +K ++ + EN + D FN
Sbjct: 50 HARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKEN-----KFLCVLMSDWFNFHG 104
Query: 79 DVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+ I +EL+ + + ++ + Q H ++ YQL L+++H + H DLKP N+L
Sbjct: 105 HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENIL 164
Query: 137 L-----------NASCD--------LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 177
+ SC+ +++ DFG A T + + T V TR YR PE++L
Sbjct: 165 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHHTTIVATRHYRPPEVILE 222
Query: 178 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASL--------- 228
+ D+WS+GCIL E LF + L ++ +++G +
Sbjct: 223 LG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYF 281
Query: 229 ---GFLRSDNAR--RYVRQLPRCRK-QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEE 282
G + +N+ RYV++ C+ + + + + DL+ +ML FDP +RIT+ E
Sbjct: 282 YKGGLVWDENSSDGRYVKE--NCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE 339
Query: 283 ALRHPYLQSL 292
AL HP+ L
Sbjct: 340 ALLHPFFAGL 349
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 45/273 (16%)
Query: 25 TREEVAIKKIG-NAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIV 83
T E AIK I ++ ++ L E+ +L+ ++H N++ + + + + Y+V
Sbjct: 45 TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKR-----NYYLV 99
Query: 84 YELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
E+ +L I Q+ ++ + Q+L G Y+H +++HRDLKP NLLL +
Sbjct: 100 MEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSR 159
Query: 143 ---LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+KI DFGL+ M E + T +Y APE+L +Y D+WS G IL ++
Sbjct: 160 DALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK--KYDEKCDVWSCGVILYILLC 217
Query: 200 REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-- 257
P F G+ D + L R K +F+ P+
Sbjct: 218 GYPPFGGQ----------------TDQEI--------------LKRVEKGKFSFDPPDWT 247
Query: 258 -KSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
S A L++ ML ++P+KRI+ EEAL HP++
Sbjct: 248 QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 47/278 (16%)
Query: 21 VNSETREEVAIKKIGNAFDNIIDARRTLREIK-LLRHMEHENVIAIKDIIRPPKKDTFND 79
V+ T E A+K I + R EI+ LLR+ +H N+I +KD+ D
Sbjct: 47 VHKATNMEYAVKVIDKS------KRDPSEEIEILLRYGQHPNIITLKDVY-----DDGKH 95
Query: 80 VYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
VY+V ELM L +I+R + ++ + L+ + + ++Y+HS V+HRDLKPSN+L
Sbjct: 96 VYLVTELMRGGELLDKILR-QKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILY 154
Query: 138 -----NASCDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVG 191
N C L+I DFG A+ +E + T + APE+L Y DIWS+G
Sbjct: 155 VDESGNPEC-LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKR-QGYDEGCDIWSLG 212
Query: 192 CILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQF 251
+L ++ T P D L + ++
Sbjct: 213 ILLYTMLAG---------------YTPFANGPSDTPEEILTRIGSGKFTLS--------- 248
Query: 252 ATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
+ S A DL+ KML DP++R+T ++ L+HP++
Sbjct: 249 GGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 47/278 (16%)
Query: 21 VNSETREEVAIKKIGNAFDNIIDARRTLREIK-LLRHMEHENVIAIKDIIRPPKKDTFND 79
V+ T E A+K I + R EI+ LLR+ +H N+I +KD+ D
Sbjct: 47 VHKATNMEYAVKVIDKS------KRDPSEEIEILLRYGQHPNIITLKDVY-----DDGKH 95
Query: 80 VYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
VY+V ELM L +I+R + ++ + L+ + + ++Y+HS V+HRDLKPSN+L
Sbjct: 96 VYLVTELMRGGELLDKILR-QKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILY 154
Query: 138 -----NASCDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVG 191
N C L+I DFG A+ +E + T + APE+L Y DIWS+G
Sbjct: 155 VDESGNPEC-LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKR-QGYDEGCDIWSLG 212
Query: 192 CILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQF 251
+L ++ T P D L + ++
Sbjct: 213 ILLYTMLAG---------------YTPFANGPSDTPEEILTRIGSGKFTLS--------- 248
Query: 252 ATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
+ S A DL+ KML DP++R+T ++ L+HP++
Sbjct: 249 GGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 140/310 (45%), Gaps = 49/310 (15%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFN--- 78
++ + +VA+K I N AR + +K ++ + EN + D FN
Sbjct: 73 HARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKEN-----KFLCVLMSDWFNFHG 127
Query: 79 DVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+ I +EL+ + + ++ + Q H ++ YQL L+++H + H DLKP N+L
Sbjct: 128 HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENIL 187
Query: 137 L-----------NASCD--------LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 177
+ SC+ +++ DFG A T + + T V TR YR PE++L
Sbjct: 188 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHHTTIVATRHYRPPEVILE 245
Query: 178 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASL--------- 228
+ D+WS+GCIL E LF + L ++ +++G +
Sbjct: 246 LG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYF 304
Query: 229 ---GFLRSDNAR--RYVRQLPRCRK-QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEE 282
G + +N+ RYV++ C+ + + + + DL+ +ML FDP +RIT+ E
Sbjct: 305 YKGGLVWDENSSDGRYVKE--NCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE 362
Query: 283 ALRHPYLQSL 292
AL HP+ L
Sbjct: 363 ALLHPFFAGL 372
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 45/273 (16%)
Query: 25 TREEVAIKKIG-NAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIV 83
T E AIK I ++ ++ L E+ +L+ ++H N++ + + + + Y+V
Sbjct: 28 TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKR-----NYYLV 82
Query: 84 YELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
E+ +L I Q+ ++ + Q+L G Y+H +++HRDLKP NLLL +
Sbjct: 83 MEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSR 142
Query: 143 ---LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+KI DFGL+ M E + T +Y APE+L +Y D+WS G IL ++
Sbjct: 143 DALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK--KYDEKCDVWSCGVILYILLC 200
Query: 200 REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-- 257
P F G+ D + L R K +F+ P+
Sbjct: 201 GYPPFGGQ----------------TDQEI--------------LKRVEKGKFSFDPPDWT 230
Query: 258 -KSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
S A L++ ML ++P+KRI+ EEAL HP++
Sbjct: 231 QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 45/290 (15%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 65
G + ++I A + T++ VAIK I A + + ++ EI +L ++H N++A+
Sbjct: 29 GAFSEVIL-----AEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 66 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 124
DI ++ +Y++ +L+ +L I T+ ++Q+L +KY+H
Sbjct: 82 DDIY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 125 VLHRDLKPSNLL---LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 181
++HRDLKP NLL L+ + I DFGL++ ++ T Y APE+L Y
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ-KPY 195
Query: 182 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 241
+ A+D WS+G I ++ P F +N +
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF---------------------------YDENDAKLFE 228
Query: 242 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
Q+ + + + + + S A D + ++ DP KR T E+AL+HP++
Sbjct: 229 QILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 47/291 (16%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIA 64
G + ++I A + T++ VAIK I ++ + EI +L ++H N++A
Sbjct: 29 GAFSEVIL-----AEDKRTQKLVAIKCIAK---KALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 65 IKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 123
+ DI ++ +Y++ +L+ +L I T+ ++Q+L +KY+H
Sbjct: 81 LDDIY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 124 SVLHRDLKPSNLL---LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 180
++HRDLKP NLL L+ + I DFGL++ ++ T Y APE+L
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ-KP 194
Query: 181 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 240
Y+ A+D WS+G I ++ P F +N +
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPF---------------------------YDENDAKLF 227
Query: 241 RQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
Q+ + + + + + S A D + ++ DP KR T E+AL+HP++
Sbjct: 228 EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 52/287 (18%)
Query: 21 VNSETREEVAIKKI----GNAF--DNIIDARR-TLREIKLLRHME-HENVIAIKDIIRPP 72
++ T +E A+K I G +F + + + R TL+E+ +LR + H N+I +KD
Sbjct: 37 IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY--- 93
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
+ +TF ++V++LM +L + L++ + + LL + +H +++HRDLK
Sbjct: 94 ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLK 151
Query: 132 PSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL-----NCTEYTAAID 186
P N+LL+ ++K+ DFG + + + T Y APE++ N Y +D
Sbjct: 152 PENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITE---LIGSPDDASLGFLRSDNARRYVRQL 243
+WS G I+ ++ P F + + LR+I GSP+
Sbjct: 212 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE------------------- 252
Query: 244 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ + S DL+ + LV P KR T EEAL HP+ Q
Sbjct: 253 -----------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 45/290 (15%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 65
G + ++I A + T++ VAIK I A + + ++ EI +L ++H N++A+
Sbjct: 29 GAFSEVIL-----AEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 66 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 124
DI ++ +Y++ +L+ +L I T+ ++Q+L +KY+H
Sbjct: 82 DDIY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 125 VLHRDLKPSNLL---LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 181
++HRDLKP NLL L+ + I DFGL++ ++ T Y APE+L Y
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ-KPY 195
Query: 182 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 241
+ A+D WS+G I ++ P F +N +
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF---------------------------YDENDAKLFE 228
Query: 242 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
Q+ + + + + + S A D + ++ DP KR T E+AL+HP++
Sbjct: 229 QILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 45/290 (15%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 65
G + ++I A + T++ VAIK I A + + ++ EI +L ++H N++A+
Sbjct: 29 GAFSEVIL-----AEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 66 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 124
DI ++ +Y++ +L+ +L I T+ ++Q+L +KY+H
Sbjct: 82 DDIY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 125 VLHRDLKPSNLL---LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 181
++HRDLKP NLL L+ + I DFGL++ ++ T Y APE+L Y
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ-KPY 195
Query: 182 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 241
+ A+D WS+G I ++ P F +N +
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF---------------------------YDENDAKLFE 228
Query: 242 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
Q+ + + + + + S A D + ++ DP KR T E+AL+HP++
Sbjct: 229 QILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE ++N D+WS+G I +++ F G L ++ +
Sbjct: 175 KNIFGTPAFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+D F N S+ A D + ++LV DP KR+T+
Sbjct: 234 YEFEDE---------------------------YFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 62 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 173
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G
Sbjct: 174 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 218
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 219 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 265
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 266 QDSLQHPWIK 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 62 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 173
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G
Sbjct: 174 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 218
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 219 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 265
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 266 QDSLQHPWIK 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G L ++ +
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+D F N S+ A D + ++LV DP KR+T+
Sbjct: 234 YEFEDEY---------------------------FSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 49/299 (16%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPP 72
F I V+ ++ + A+K I + T +EI L+ E H N++ + ++
Sbjct: 24 FSICRKCVHKKSNQAFAVKIISKRME-----ANTQKEITALKLCEGHPNIVKLHEV---- 74
Query: 73 KKDTFND---VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 128
F+D ++V EL++ +L + I+ + ++ Y + +L+ + ++H V+HR
Sbjct: 75 ----FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 129 DLKPSNLLL---NASCDLKIGDFGLAR-TTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
DLKP NLL N + ++KI DFG AR + + T Y APE LLN Y +
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE-LLNQNGYDES 189
Query: 185 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 244
D+WS+G IL +++ + F D RS V +
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHD-----------------------RSLTCTSAVEIMK 226
Query: 245 RCRKQQFA---TRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
+ +K F+ + N S A DL++ +L DPNKR+ + + +LQ L+ P+
Sbjct: 227 KIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPL 285
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 38/245 (15%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQY 108
EI LL+ ++H N+I + D+ K Y+V E + +L + I + + +
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKY-----FYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLL---NASCDLKIGDFGLARTTSETDFMTEYVV 165
+ Q+L G+ Y+H +++HRD+KP N+LL N+ ++KI DFGL+ S+ + + +
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLG 210
Query: 166 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDD 225
T +Y APE+L +Y D+WS G I+ ++ P F G+
Sbjct: 211 TAYYIAPEVLK--KKYNEKCDVWSCGVIMYILLCGYPPFGGQ------------------ 250
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
N + ++++ + + + N S A +L++ ML +D NKR T EEAL
Sbjct: 251 ---------NDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301
Query: 286 HPYLQ 290
+++
Sbjct: 302 SRWIK 306
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILIGELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 44/250 (17%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 107
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 164 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T + APE++ N D+WS+G I +++ F G L ++ +
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+D F N S+ A D + ++LV DP KR+T+
Sbjct: 234 YEFEDE---------------------------YFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 281 EEALRHPYLQ 290
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 15/166 (9%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQII----RSDQQLTDD 104
E+ LLR ++H N++ D I T +YIV E + DL +I + Q L ++
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 105 HCQYFLYQLLRGLKYVHSAS-----VLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETD 158
+ QL LK H S VLHRDLKP+N+ L+ ++K+GDFGLAR + + D
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED 171
Query: 159 FMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 204
F E+V T +Y +PE +N Y DIWS+GC+L E+ P F
Sbjct: 172 FAKEFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 38/253 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
RE+ +LR + H N+I + DI + DV ++ EL+ +L + + LT+D
Sbjct: 57 REVNILREIRHPNIITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 111
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L + +K+ DFG+A +
Sbjct: 112 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 171
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 223
T + APE ++N D+WS+G I +++ F G+ L I+ +
Sbjct: 172 FGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 230
Query: 224 DDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA 283
D+ F N S A D + ++LV DP +R+T+ ++
Sbjct: 231 DEEY---------------------------FSNTSELAKDFIRRLLVKDPKRRMTIAQS 263
Query: 284 LRHPYLQSLHDLN 296
L H +++++ N
Sbjct: 264 LEHSWIKAIRRRN 276
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDD 104
+ +EI +L+ ++H NV+ + +++ P +D +Y+V+EL++ + + + L++D
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNED---HLYMVFELVNQGPVMEVPTLKPLSED 137
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD-FMTEY 163
+++ L++G++Y+H ++HRD+KPSNLL+ +KI DFG++ +D ++
Sbjct: 138 QARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 164 VVTRWYRAPELLLNCTEYTA--AIDIWSVGCIL 194
V T + APE L + + A+D+W++G L
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 38/281 (13%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
F + V +E A K I + D ++ RE ++ R ++H N++ + D I
Sbjct: 35 FSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG 94
Query: 74 KDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
Y++++L+ +L + I + + ++ + + Q+L + + H V+HRDLKP
Sbjct: 95 HH-----YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKP 149
Query: 133 SNLLLNA---SCDLKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
NLLL + +K+ DFGLA E + T Y +PE+L Y +D+W
Sbjct: 150 ENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK-DPYGKPVDLW 208
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+ G IL ++ P F +D Q RL ++ D P
Sbjct: 209 ACGVILYILLVGYPPFWDED---QHRLYQQIKAGAYD-----------------FP---S 245
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
++ T P A DL+ KML +P+KRIT EAL+HP++
Sbjct: 246 PEWDTVTPE----AKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
F + + T +E A K I + D ++ RE ++ R ++H N++ + D I
Sbjct: 17 FSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI---S 73
Query: 74 KDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
++ F+ Y+V++L+ +L + I + + ++ + + Q+L + + H ++HRDLKP
Sbjct: 74 EEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKP 131
Query: 133 SNLLL---NASCDLKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
NLLL + +K+ DFGLA + + T Y +PE+L Y +D+W
Sbjct: 132 ENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK-DPYGKPVDMW 190
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+ G IL ++ P F +D Q RL ++ D P
Sbjct: 191 ACGVILYILLVGYPPFWDED---QHRLYQQIKAGAYD-----------------FP---S 227
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
++ T P A DL+ KML +P KRIT EAL+HP++
Sbjct: 228 PEWDTVTPE----AKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPK 73
F + + T +E A K I + D ++ RE ++ R ++H N++ + D I
Sbjct: 17 FSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI---S 73
Query: 74 KDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
++ F+ Y+V++L+ +L + I + + ++ + + Q+L + + H ++HRDLKP
Sbjct: 74 EEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKP 131
Query: 133 SNLLL---NASCDLKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
NLLL + +K+ DFGLA + + T Y +PE+L Y +D+W
Sbjct: 132 ENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK-DPYGKPVDMW 190
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+ G IL ++ P F +D Q RL ++ D P
Sbjct: 191 ACGVILYILLVGYPPFWDED---QHRLYQQIKAGAYD-----------------FP---S 227
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
++ T P A DL+ KML +P KRIT EAL+HP++
Sbjct: 228 PEWDTVTPE----AKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 44/271 (16%)
Query: 25 TREEVAIKKIGN----AFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV 80
T +VA+K + + D + RR ++ +KL RH ++I + +I P +D+
Sbjct: 40 TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH---PHIIKLYQVISTP-----SDI 91
Query: 81 YIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
++V E + +L I + +L + + Q+L G+ Y H V+HRDLKP N+LL+A
Sbjct: 92 FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA 151
Query: 140 SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ KI DFGL+ S+ +F+ + Y APE++ +DIWS G IL ++
Sbjct: 152 HMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC 211
Query: 200 REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKS 259
+L F D+ +++ C + ++ N S
Sbjct: 212 --------------------------GTLPF-DDDHVPTLFKKI--CDGIFYTPQYLNPS 242
Query: 260 SGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ LL+ ML DP KR T+++ H + +
Sbjct: 243 --VISLLKHMLQVDPMKRATIKDIREHEWFK 271
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDW---KEK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 26 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRR-- 75
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 76 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 192
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 193 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDW---KEK 224
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 225 KTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 140/290 (48%), Gaps = 48/290 (16%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNA-FDNI--IDARRTLREIKLLRHMEHENVIAIKDIIR 70
F + +N ET ++ A+K + A F + + RE + ++H +++ +++
Sbjct: 37 FSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV---ELLE 93
Query: 71 PPKKDTFNDVYIVYELMD-TDL--HQIIRSDQQL--TDDHCQYFLYQLLRGLKYVHSASV 125
D +Y+V+E MD DL + R+D ++ +++ Q+L L+Y H ++
Sbjct: 94 TYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 126 LHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEY-VVTRWYRAPELLLNCTEY 181
+HRD+KP N+LL + S +K+GDFG+A E+ + V T + APE++ Y
Sbjct: 152 IHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR-EPY 210
Query: 182 TAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 240
+D+W G IL +++ P + K+ RL +I +
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGII----------------KGKY 249
Query: 241 RQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ PR ++ + S A DL+ +ML+ DP +RITV EAL HP+L+
Sbjct: 250 KMNPR--------QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIKDIIRPPK 73
I A T ++VA+KK+ D RR L E+ ++R H+NV+ +
Sbjct: 60 IVCIATEKHTGKQVAVKKM----DLRKQQRRELLFNEVVIMRDYHHDNVVDMYS-----S 110
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
+++++V E ++ I + ++ ++ +LR L Y+H+ V+HRD+K
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 134 NLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
++LL + +K+ DFG A+ + E V T ++ APE +++ Y +DIWS+G
Sbjct: 171 SILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPE-VISRLPYGTEVDIWSLGI 229
Query: 193 ILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFA 252
++ E++ EP + + + +R I D+ V+ L +
Sbjct: 230 MVIEMIDGEPPYFNEPPLQAMRRI----------------RDSLPPRVKDLHKV------ 267
Query: 253 TRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEH 311
SS L+ MLV +P++R T +E L HP+L+ L P C P + H
Sbjct: 268 ------SSVLRGFLDLMLVREPSQRATAQELLGHPFLK----LAGPPSCIVPLMRQYRH 316
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 88/166 (53%), Gaps = 15/166 (9%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQII----RSDQQLTDD 104
E+ LLR ++H N++ D I T +YIV E + DL +I + Q L ++
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 105 HCQYFLYQLLRGLKYVHSAS-----VLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETD 158
+ QL LK H S VLHRDLKP+N+ L+ ++K+GDFGLAR + +T
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 159 FMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 204
F +V T +Y +PE +N Y DIWS+GC+L E+ P F
Sbjct: 172 FAKAFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 130/271 (47%), Gaps = 37/271 (13%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T +EVA++ I N ++ RE+++++ + H N++ + ++I +T +Y+V
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVM 92
Query: 85 ELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
E ++ + + ++ + + Q++ ++Y H ++HRDLK NLLL+A ++
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 152
Query: 144 KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL 203
KI DFG + + + + E+ + Y APEL +D+WS+G IL +++
Sbjct: 153 KIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 204 FPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV 263
F G++ + +LR R + ++ F S+
Sbjct: 213 FDGQN-LKELR-----------------------------ERVLRGKYRIPF-YMSTDCE 241
Query: 264 DLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
+LL+K L+ +P+KR T+E+ ++ ++ H+
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 38/253 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
RE+ +LR + H N+I + DI + DV ++ EL+ +L + + LT+D
Sbjct: 78 REVNILREIRHPNIITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 132
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L + +K+ DFG+A +
Sbjct: 133 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 192
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 223
T + APE ++N D+WS+G I +++ F G+ L I+ +
Sbjct: 193 FGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 251
Query: 224 DDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA 283
D+ F N S A D + ++LV DP +R+ + ++
Sbjct: 252 DEEY---------------------------FSNTSELAKDFIRRLLVKDPKRRMXIAQS 284
Query: 284 LRHPYLQSLHDLN 296
L H +++++ N
Sbjct: 285 LEHSWIKAIRRRN 297
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 26 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 75
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 76 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 193 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 224
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 225 KTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 88/166 (53%), Gaps = 15/166 (9%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQII----RSDQQLTDD 104
E+ LLR ++H N++ D I T +YIV E + DL +I + Q L ++
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 105 HCQYFLYQLLRGLKYVHSAS-----VLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETD 158
+ QL LK H S VLHRDLKP+N+ L+ ++K+GDFGLAR + +T
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 159 FMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 204
F +V T +Y +PE +N Y DIWS+GC+L E+ P F
Sbjct: 172 FAKTFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 118/246 (47%), Gaps = 43/246 (17%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
EI + R + H++V+ ND V++V EL L ++ + + LT+ +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEAR 142
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV-- 165
Y+L Q++ G +Y+H V+HRDLK NL LN ++KIGDFGLA T E D + V+
Sbjct: 143 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKVLCG 201
Query: 166 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDD 225
T Y APE +L+ ++ +D+WS+GCI + T L+G P
Sbjct: 202 TPNYIAPE-VLSKKGHSFEVDVWSIGCI---------------------MYTLLVGKPP- 238
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
F S Y+ R +K +++ + + A L++KML DP R T+ E L
Sbjct: 239 ----FETSCLKETYL----RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLN 289
Query: 286 HPYLQS 291
+ S
Sbjct: 290 DEFFTS 295
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 26 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 75
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 76 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 193 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 224
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 225 KTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 24 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 73
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 74 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 130
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 131 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 190
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 191 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 222
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 223 KTYLNPWKKIDSAPLALLHKILVENPSARITI 254
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 118/246 (47%), Gaps = 43/246 (17%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
EI + R + H++V+ ND V++V EL L ++ + + LT+ +
Sbjct: 91 EISIHRSLAHQHVVGFHGFFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEAR 144
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV-- 165
Y+L Q++ G +Y+H V+HRDLK NL LN ++KIGDFGLA T E D + V+
Sbjct: 145 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKVLCG 203
Query: 166 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDD 225
T Y APE +L+ ++ +D+WS+GCI + T L+G P
Sbjct: 204 TPNYIAPE-VLSKKGHSFEVDVWSIGCI---------------------MYTLLVGKPP- 240
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
F S Y+ R +K +++ + + A L++KML DP R T+ E L
Sbjct: 241 ----FETSCLKETYL----RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLN 291
Query: 286 HPYLQS 291
+ S
Sbjct: 292 DEFFTS 297
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 26 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 75
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 76 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 193 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 224
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 225 KTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 26 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 75
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 76 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 193 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 224
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 225 KTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 26 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 75
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 76 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 193 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 224
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 225 KTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 145/309 (46%), Gaps = 44/309 (14%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T +EVA+K I N ++ RE+++++ + H N++ + ++I +T +Y+V
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVM 92
Query: 85 ELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
E ++ + + ++ + + Q++ ++Y H ++HRDLK NLLL+A ++
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 152
Query: 144 KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL 203
KI DFG + + + + + + Y APEL +D+WS+G IL +++
Sbjct: 153 KIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 204 FPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV 263
F G++ + +LR R + ++ F S+
Sbjct: 213 FDGQN-LKELR-----------------------------ERVLRGKYRIPF-YMSTDCE 241
Query: 264 DLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEP---VCPRPFHFDFEHSSCTEDHIR 320
+LL+K L+ +P+KR T+E+ ++ ++ H+ +DE V P P D++ TE +
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHE-DDELKPYVAPLP---DYKDPRRTELMVS 297
Query: 321 ELIWRESVK 329
RE ++
Sbjct: 298 MGYTREEIQ 306
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSXQEYSDW---KEK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 26 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 75
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 76 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 193 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 224
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 225 KTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 118/246 (47%), Gaps = 43/246 (17%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
EI + R + H++V+ ND V++V EL L ++ + + LT+ +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEAR 118
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV-- 165
Y+L Q++ G +Y+H V+HRDLK NL LN ++KIGDFGLA T E D + V+
Sbjct: 119 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKVLCG 177
Query: 166 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDD 225
T Y APE +L+ ++ +D+WS+GCI + T L+G P
Sbjct: 178 TPNYIAPE-VLSKKGHSFEVDVWSIGCI---------------------MYTLLVGKPP- 214
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
F S Y+ R +K +++ + + A L++KML DP R T+ E L
Sbjct: 215 ----FETSCLKETYL----RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLN 265
Query: 286 HPYLQS 291
+ S
Sbjct: 266 DEFFTS 271
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + + HENV+ R
Sbjct: 25 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-- 74
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 75 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 192 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 223
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 38/248 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
RE+ +LR + H N+I + DI + DV ++ EL+ +L + + LT+D
Sbjct: 64 REVNILREIRHPNIITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 118
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 163
FL Q+L G+ Y+HS + H DLKP N++L + +K+ DFG+A +
Sbjct: 119 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 178
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 223
T + APE ++N D+WS+G I +++ F G+ L
Sbjct: 179 FGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL---------- 227
Query: 224 DDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA 283
++ + D Y F N S A D + ++LV DP +R+ + ++
Sbjct: 228 --TNISAVNYDFDEEY---------------FSNTSELAKDFIRRLLVKDPKRRMXIAQS 270
Query: 284 LRHPYLQS 291
L H ++++
Sbjct: 271 LEHSWIKA 278
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
RE+ +LR + H NVI + D+ + DV ++ EL+ +L + + L+++
Sbjct: 64 REVSILRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL---NASC-DLKIGDFGLARTTSETDFMTEY 163
F+ Q+L G+ Y+H+ + H DLKP N++L N +K+ DFGLA +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 223
T + APE ++N D+WS+G I +++ F G L IT +
Sbjct: 179 FGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF 237
Query: 224 DDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA 283
D ++F F + S A D + K+LV + KR+T++EA
Sbjct: 238 D------------------------EEF---FSHTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 284 LRHPYL 289
LRHP++
Sbjct: 271 LRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
RE+ +LR + H NVI + D+ + DV ++ EL+ +L + + L+++
Sbjct: 64 REVSILRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL---NASC-DLKIGDFGLARTTSETDFMTEY 163
F+ Q+L G+ Y+H+ + H DLKP N++L N +K+ DFGLA +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 223
T + APE ++N D+WS+G I +++ F G L IT +
Sbjct: 179 FGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF 237
Query: 224 DDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA 283
D ++F F + S A D + K+LV + KR+T++EA
Sbjct: 238 D------------------------EEF---FSHTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 284 LRHPYL 289
LRHP++
Sbjct: 271 LRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
RE+ +LR + H NVI + D+ + DV ++ EL+ +L + + L+++
Sbjct: 64 REVSILRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL---NASC-DLKIGDFGLARTTSETDFMTEY 163
F+ Q+L G+ Y+H+ + H DLKP N++L N +K+ DFGLA +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 223
T + APE ++N D+WS+G I +++ F G L IT +
Sbjct: 179 FGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF 237
Query: 224 DDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA 283
D ++F F S A D + K+LV + KR+T++EA
Sbjct: 238 D------------------------EEF---FSQTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 284 LRHPYL 289
LRHP++
Sbjct: 271 LRHPWI 276
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 47/278 (16%)
Query: 21 VNSETREEVAIKKIGNAFDNIIDARRTLREIK-LLRHMEHENVIAIKDIIRPPKKDTFND 79
++ T E A+K I + R EI+ LLR+ +H N+I +KD+ D
Sbjct: 42 IHKATNXEFAVKIIDKS------KRDPTEEIEILLRYGQHPNIITLKDVY-----DDGKY 90
Query: 80 VYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL- 136
VY+V EL L +I+R + ++ L+ + + ++Y+H+ V+HRDLKPSN+L
Sbjct: 91 VYVVTELXKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILY 149
Query: 137 LNASCD---LKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
++ S + ++I DFG A+ +E + T + APE +L Y AA DIWS+G
Sbjct: 150 VDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPE-VLERQGYDAACDIWSLGV 208
Query: 193 ILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFA 252
+L +T T PDD L + ++ +
Sbjct: 209 LLYTXLTG---------------YTPFANGPDDTPEEILARIGSGKF----------SLS 243
Query: 253 TRFPNK-SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
+ N S A DL+ K L DP++R+T LRHP++
Sbjct: 244 GGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
RE+ +LR + H NVI + D+ + DV ++ EL+ +L + + L+++
Sbjct: 64 REVSILRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL---NASC-DLKIGDFGLARTTSETDFMTEY 163
F+ Q+L G+ Y+H+ + H DLKP N++L N +K+ DFGLA +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 223
T + APE ++N D+WS+G I +++ F G L IT +
Sbjct: 179 FGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF 237
Query: 224 DDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA 283
D ++F F + S A D + K+LV + KR+T++EA
Sbjct: 238 D------------------------EEF---FSHTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 284 LRHPYL 289
LRHP++
Sbjct: 271 LRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
RE+ +LR + H NVI + D+ + DV ++ EL+ +L + + L+++
Sbjct: 64 REVSILRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL---NASC-DLKIGDFGLARTTSETDFMTEY 163
F+ Q+L G+ Y+H+ + H DLKP N++L N +K+ DFGLA +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 223
T + APE ++N D+WS+G I +++ F G L IT +
Sbjct: 179 FGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF 237
Query: 224 DDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA 283
D ++F F S A D + K+LV + KR+T++EA
Sbjct: 238 D------------------------EEF---FSQTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 284 LRHPYL 289
LRHP++
Sbjct: 271 LRHPWI 276
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 129/271 (47%), Gaps = 37/271 (13%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T +EVA+K I N ++ RE+++++ + H N++ + ++I +T +Y+V
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVM 92
Query: 85 ELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
E ++ + + ++ + + Q++ ++Y H ++HRDLK NLLL+A ++
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 152
Query: 144 KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL 203
KI DFG + + + + + + Y APEL +D+WS+G IL +++
Sbjct: 153 KIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 204 FPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV 263
F G++ + +LR R + ++ F S+
Sbjct: 213 FDGQN-LKELR-----------------------------ERVLRGKYRIPF-YMSTDCE 241
Query: 264 DLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
+LL+K L+ +P+KR T+E+ ++ ++ H+
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 128/271 (47%), Gaps = 37/271 (13%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T +EVA+K I N ++ RE+++++ + H N++ + ++I +T +Y+V
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVM 92
Query: 85 ELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
E ++ + + ++ + + Q++ ++Y H ++HRDLK NLLL+A ++
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 152
Query: 144 KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL 203
KI DFG + + + + + Y APEL +D+WS+G IL +++
Sbjct: 153 KIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 204 FPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV 263
F G++ + +LR R + ++ F S+
Sbjct: 213 FDGQN-LKELR-----------------------------ERVLRGKYRIPF-YMSTDCE 241
Query: 264 DLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
+LL+K L+ +P+KR T+E+ ++ ++ H+
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 38/252 (15%)
Query: 43 DARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQL 101
D ++ RE ++ R ++H N++ + D I Y++++L+ +L + I + +
Sbjct: 53 DHQKLEREARICRLLKHPNIVRLHDSISEEGHH-----YLIFDLVTGGELFEDIVAREYY 107
Query: 102 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLA-RTTSET 157
++ + + Q+L + + H V+HR+LKP NLLL + +K+ DFGLA E
Sbjct: 108 SEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167
Query: 158 DFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLIT 217
+ T Y +PE+L Y +D+W+ G IL ++ P F +D Q RL
Sbjct: 168 QAWFGFAGTPGYLSPEVLRK-DPYGKPVDLWACGVILYILLVGYPPFWDED---QHRLYQ 223
Query: 218 ELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKR 277
++ D P ++ T P A DL+ KML +P+KR
Sbjct: 224 QIKAGAYD-----------------FP---SPEWDTVTPE----AKDLINKMLTINPSKR 259
Query: 278 ITVEEALRHPYL 289
IT EAL+HP++
Sbjct: 260 ITAAEALKHPWI 271
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 117/272 (43%), Gaps = 52/272 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHMEHENVIAIKDIIRPP 72
AVN T E VA+K I+D +R + +EI + + HENV+ R
Sbjct: 26 AVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRR-- 75
Query: 73 KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
N Y+ E +L I D + + Q F +QL+ G+ Y+H + HRD+K
Sbjct: 76 ---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 132 PSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLLL+ +LKI DFGLA R + + + T Y APELL + +D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S G +L ++ E P D SD+ + Y K
Sbjct: 193 SCGIVLTAMLAGE--------------------LPWDQP-----SDSCQEYSDWK---EK 224
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 280
+ + + S + LL K+LV +P+ RIT+
Sbjct: 225 KTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 131/289 (45%), Gaps = 43/289 (14%)
Query: 25 TREEVAIKKI-GNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIV 83
T E VAIK + N + D R EI+ L+++ H+++ + ++ +T N +++V
Sbjct: 34 TGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYHVL-----ETANKIFMV 86
Query: 84 YELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
E +L I S +L+++ + Q++ + YVHS HRDLKP NLL +
Sbjct: 87 LEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHK 146
Query: 143 LKIGDFGL-ARTTSETDFMTEYVV-TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTR 200
LK+ DFGL A+ D+ + + Y APEL+ + + D+WS+G +L +M
Sbjct: 147 LKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMC- 205
Query: 201 EPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSS 260
GFL D+ R + ++ + SS
Sbjct: 206 ----------------------------GFLPFDDDNVMALYKKIMRGKYDVPKWLSPSS 237
Query: 261 GAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPF-HFD 308
+ LL++ML DP KRI+++ L HP++ ++ E PF H D
Sbjct: 238 --ILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLD 284
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 29/193 (15%)
Query: 29 VAIKKIGNAFDNIIDARR---TLREIKLLRHMEHENVIA-----IKDIIRPPKKDTFNDV 80
VA+KK+ FD ++DA+ ++EI LL+ + H NVI I+D N++
Sbjct: 60 VALKKV-QIFD-LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED----------NEL 107
Query: 81 YIVYELMDT-DLHQIIR---SDQQLTDDHC--QYFLYQLLRGLKYVHSASVLHRDLKPSN 134
IV EL D DL ++I+ ++L + +YF+ QL L+++HS V+HRD+KP+N
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV-QLCSALEHMHSRRVMHRDIKPAN 166
Query: 135 LLLNASCDLKIGDFGLAR-TTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCI 193
+ + A+ +K+GD GL R +S+T V T +Y +PE + Y DIWS+GC+
Sbjct: 167 VFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCL 225
Query: 194 LGEIMTREPLFPG 206
L E+ + F G
Sbjct: 226 LYEMAALQSPFYG 238
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 43/246 (17%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
EI + R + H++V+ ND V++V EL L ++ + + LT+ +
Sbjct: 71 EISIHRSLAHQHVVGFHGFFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEAR 124
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV-- 165
Y+L Q++ G +Y+H V+HRDLK NL LN ++KIGDFGLA T E D + +
Sbjct: 125 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKTLCG 183
Query: 166 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDD 225
T Y APE +L+ ++ +D+WS+GCI + T L+G P
Sbjct: 184 TPNYIAPE-VLSKKGHSFEVDVWSIGCI---------------------MYTLLVGKPP- 220
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
F S Y+ R +K +++ + + A L++KML DP R T+ E L
Sbjct: 221 ----FETSCLKETYL----RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLN 271
Query: 286 HPYLQS 291
+ S
Sbjct: 272 DEFFTS 277
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 43/246 (17%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
EI + R + H++V+ ND V++V EL L ++ + + LT+ +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEAR 120
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV-- 165
Y+L Q++ G +Y+H V+HRDLK NL LN ++KIGDFGLA T E D + +
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKTLCG 179
Query: 166 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDD 225
T Y APE +L+ ++ +D+WS+GCI + T L+G P
Sbjct: 180 TPNYIAPE-VLSKKGHSFEVDVWSIGCI---------------------MYTLLVGKPP- 216
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
F S Y+ R +K +++ + + A L++KML DP R T+ E L
Sbjct: 217 ----FETSCLKETYL----RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLN 267
Query: 286 HPYLQS 291
+ S
Sbjct: 268 DEFFTS 273
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 43/246 (17%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
EI + R + H++V+ ND V++V EL L ++ + + LT+ +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEAR 120
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV-- 165
Y+L Q++ G +Y+H V+HRDLK NL LN ++KIGDFGLA T E D + +
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKTLCG 179
Query: 166 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDD 225
T Y APE +L+ ++ +D+WS+GCI + T L+G P
Sbjct: 180 TPNYIAPE-VLSKKGHSFEVDVWSIGCI---------------------MYTLLVGKPP- 216
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
F S Y+ R +K +++ + + A L++KML DP R T+ E L
Sbjct: 217 ----FETSCLKETYL----RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLN 267
Query: 286 HPYLQS 291
+ S
Sbjct: 268 DEFFTS 273
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 128/271 (47%), Gaps = 37/271 (13%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T +EVA+K I N ++ RE+++++ + H N++ + ++I +T +Y+V
Sbjct: 31 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVM 85
Query: 85 ELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
E ++ + + + + + Q++ ++Y H ++HRDLK NLLL+A ++
Sbjct: 86 EYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 145
Query: 144 KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL 203
KI DFG + + + + + + Y APEL +D+WS+G IL +++
Sbjct: 146 KIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
Query: 204 FPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV 263
F G++ + +LR R + ++ F S+
Sbjct: 206 FDGQN-LKELR-----------------------------ERVLRGKYRIPF-YMSTDCE 234
Query: 264 DLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
+LL+K L+ +P+KR T+E+ ++ ++ H+
Sbjct: 235 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 265
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 38/246 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQ 107
RE+ +LR + H N+I + D+ + DV ++ EL+ +L + + L+++
Sbjct: 64 REVSILRQVLHPNIITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASC----DLKIGDFGLARTTSETDFMTEY 163
F+ Q+L G+ Y+H+ + H DLKP N++L +K+ DFGLA +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 223
T + APE ++N D+WS+G I +++ F G L IT +
Sbjct: 179 FGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF 237
Query: 224 DDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA 283
D ++F F S A D + K+LV + KR+T++EA
Sbjct: 238 D------------------------EEF---FSQTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 284 LRHPYL 289
LRHP++
Sbjct: 271 LRHPWI 276
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 90/157 (57%), Gaps = 8/157 (5%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQY 108
EI + + +++ +V+ + D F VY+V E+ L ++ + + +T+ +Y
Sbjct: 92 EIAIHKSLDNPHVVGFHGFF---EDDDF--VYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA-RTTSETDFMTEYVVTR 167
F+ Q ++G++Y+H+ V+HRDLK NL LN D+KIGDFGLA + + + + T
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 206
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 204
Y APE+L ++ +DIWS+GCIL ++ +P F
Sbjct: 207 NYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 129/271 (47%), Gaps = 37/271 (13%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T +EVA++ I N ++ RE+++++ + H N++ + ++I +T +Y+V
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVM 92
Query: 85 ELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
E ++ + + ++ + + Q++ ++Y H ++HRDLK NLLL+A ++
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 152
Query: 144 KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL 203
KI DFG + + + + + + Y APEL +D+WS+G IL +++
Sbjct: 153 KIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 204 FPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV 263
F G++ + +LR R + ++ F S+
Sbjct: 213 FDGQN-LKELR-----------------------------ERVLRGKYRIPF-YMSTDCE 241
Query: 264 DLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
+LL+K L+ +P+KR T+E+ ++ ++ H+
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 39/220 (17%)
Query: 107 QYFLYQLLRGLKYVHSASVLHRDLKPSNLL-LNA------------------SCDLKIGD 147
++ +QL + +K++H + H DLKP N+L +N+ S +++ D
Sbjct: 140 RHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVD 199
Query: 148 FGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGK 207
FG A T + + + V TR YRAPE++L ++ D+WS+GCI+ E LF
Sbjct: 200 FGSA--TFDHEHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTH 256
Query: 208 DYVHQLRLITELIGSPDD--------------ASLGFLRSDNARRYVRQLPRCRK-QQFA 252
D L ++ ++G L + + +A RYVR+ C+ +++
Sbjct: 257 DNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRE--NCKPLRRYL 314
Query: 253 TRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 292
T + DL+E ML ++P KR+T+ EAL+HP+ L
Sbjct: 315 TSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARL 354
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 90/157 (57%), Gaps = 8/157 (5%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQY 108
EI + + +++ +V+ + D F VY+V E+ L ++ + + +T+ +Y
Sbjct: 76 EIAIHKSLDNPHVVGFHGFF---EDDDF--VYVVLEICRRRSLLELHKRRKAVTEPEARY 130
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA-RTTSETDFMTEYVVTR 167
F+ Q ++G++Y+H+ V+HRDLK NL LN D+KIGDFGLA + + + + T
Sbjct: 131 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 204
Y APE+L ++ +DIWS+GCIL ++ +P F
Sbjct: 191 NYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 10/158 (6%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQY 108
EI + + +++ +V+ + D F VY+V E+ L ++ + + +T+ +Y
Sbjct: 92 EIAIHKSLDNPHVVGFHGFF---EDDDF--VYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--T 166
F+ Q ++G++Y+H+ V+HRDLK NL LN D+KIGDFGLA T E D + + T
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKKTLCGT 205
Query: 167 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 204
Y APE+L ++ +DIWS+GCIL ++ +P F
Sbjct: 206 PNYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 127/271 (46%), Gaps = 37/271 (13%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T EVAIK I N ++ RE+++++ + H N++ + ++I +T +Y++
Sbjct: 36 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEKTLYLIM 90
Query: 85 ELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
E ++ + + ++ + + Q++ ++Y H ++HRDLK NLLL+A ++
Sbjct: 91 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNI 150
Query: 144 KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL 203
KI DFG + + + + + Y APEL +D+WS+G IL +++
Sbjct: 151 KIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
Query: 204 FPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV 263
F G++ + +LR R + ++ F S+
Sbjct: 211 FDGQN-LKELR-----------------------------ERVLRGKYRIPF-YMSTDCE 239
Query: 264 DLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
+LL++ LV +P KR T+E+ ++ ++ + H+
Sbjct: 240 NLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 270
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 123/277 (44%), Gaps = 54/277 (19%)
Query: 25 TREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYI 82
T+E VA+K I G A D + REI R + H N++ K++I P + I
Sbjct: 44 TKELVAVKYIERGAAIDENVQ-----REIINHRSLRHPNIVRFKEVILTP-----THLAI 93
Query: 83 VYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASC 141
+ E +L++ I + + ++D ++F QLL G+ Y HS + HRDLK N LL+ S
Sbjct: 94 IMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSP 153
Query: 142 D--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI-DIWSVGCIL---- 194
LKI DFG ++++ V T Y APE+LL EY I D+WS G L
Sbjct: 154 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLR-QEYDGKIADVWSCGVTLYVML 212
Query: 195 -GEIMTREPLFPGKDYVHQL-RLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFA 252
G +P P +DY + R+++ PDD +R P C
Sbjct: 213 VGAYPFEDPEEP-RDYRKTIQRILSVKYSIPDD--------------IRISPEC------ 251
Query: 253 TRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
L+ ++ V DP RI++ E H +
Sbjct: 252 ----------CHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 10/158 (6%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQY 108
EI + + +++ +V+ + D F VY+V E+ L ++ + + +T+ +Y
Sbjct: 92 EIAIHKSLDNPHVVGFHGFF---EDDDF--VYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--T 166
F+ Q ++G++Y+H+ V+HRDLK NL LN D+KIGDFGLA T E D + + T
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKKXLCGT 205
Query: 167 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 204
Y APE+L ++ +DIWS+GCIL ++ +P F
Sbjct: 206 PNYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 126/271 (46%), Gaps = 37/271 (13%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T EVAIK I N ++ RE+++++ + H N++ + ++I +T +Y++
Sbjct: 39 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEKTLYLIM 93
Query: 85 ELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
E ++ + + ++ + + Q++ ++Y H ++HRDLK NLLL+A ++
Sbjct: 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNI 153
Query: 144 KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL 203
KI DFG + + + + Y APEL +D+WS+G IL +++
Sbjct: 154 KIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
Query: 204 FPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV 263
F G++ + +LR R + ++ F S+
Sbjct: 214 FDGQN-LKELR-----------------------------ERVLRGKYRIPF-YMSTDCE 242
Query: 264 DLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
+LL++ LV +P KR T+E+ ++ ++ + H+
Sbjct: 243 NLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 273
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 108
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + TE
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELC 167
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 168 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 221
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 222 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 255 LEHPWITA 262
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 40/258 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQY 108
+EI+LLR + H+NVI + D++ +K +Y+V E + +++ S + CQ
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEK---QKMYMVMEYCVCGMQEMLDSVPEKRFPVCQA 111
Query: 109 FLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEY 163
Y QL+ GL+Y+HS ++H+D+KP NLLL LKI G+A + D
Sbjct: 112 HGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS 171
Query: 164 VVTRWYRAPELLLNCTEYTA-AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGS 222
+ ++ PE+ ++ +DIWS G L I T L+P
Sbjct: 172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG--LYP----------------- 212
Query: 223 PDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEE 282
DN + + + P S DLL+ ML ++P KR ++ +
Sbjct: 213 --------FEGDNIYKLFENIGKGSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQ 260
Query: 283 ALRHPYLQSLHDLNDEPV 300
+H + + H + PV
Sbjct: 261 IRQHSWFRKKHPPAEAPV 278
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 21/175 (12%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY-IVYELMDT-DLHQIIRSDQQLT 102
+R RE+ + H+N++++ D+ D +D Y +V E ++ L + I S L+
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDV------DEEDDCYYLVMEYIEGPTLSEYIESHGPLS 109
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF-MT 161
D F Q+L G+K+ H ++HRD+KP N+L++++ LKI DFG+A+ SET T
Sbjct: 110 VDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT 169
Query: 162 EYVV-TRWYRAPELLLN-----CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYV 210
+V+ T Y +PE CT DI+S+G +L E++ EP F G+ V
Sbjct: 170 NHVLGTVQYFSPEQAKGEATDECT------DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 43/249 (17%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSD---QQLTDD 104
EI++L+ ++H N+I I ++ + ++++YIV E + L +I+ + + L++
Sbjct: 70 EIEVLKSLDHPNIIKIFEVF-----EDYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMT 161
+ + Q++ L Y HS V+H+DLKP N+L + +KI DFGLA + T
Sbjct: 125 YVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHST 184
Query: 162 EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 221
T Y APE+ + T DIWS G ++ ++T F G
Sbjct: 185 NAAGTALYMAPEVFKR--DVTFKCDIWSAGVVMYFLLTGCLPFTG--------------- 227
Query: 222 SPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVE 281
+ V+Q ++ +A + AVDLL++ML DP +R +
Sbjct: 228 -------------TSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAA 274
Query: 282 EALRHPYLQ 290
+ L H + +
Sbjct: 275 QVLHHEWFK 283
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 40/245 (16%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQY 108
EI +L+ ++HEN++ ++DI ++ Y+V +L+ +L I T+
Sbjct: 56 EIAVLKKIKHENIVTLEDIY-----ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL 110
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLL---NASCDLKIGDFGLARTTSETDFMTEYVV 165
+ Q+L +KY+H ++HRDLKP NLL + + I DFGL++ + M+
Sbjct: 111 VIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACG 169
Query: 166 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDD 225
T Y APE+L Y+ A+D WS+G I ++ P F + I E
Sbjct: 170 TPGYVAPEVLAQ-KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE------- 221
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEAL 284
G+ +F + F + S A D + +L DPN+R T E+AL
Sbjct: 222 ---GYY------------------EFESPFWDDISESAKDFICHLLEKDPNERYTCEKAL 260
Query: 285 RHPYL 289
HP++
Sbjct: 261 SHPWI 265
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 62 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 113
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T+
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLC 172
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 173 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 226
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 227 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 259
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 260 LEHPWITA 267
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 58 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 109
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T+
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLC 168
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 169 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 222
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 223 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 255
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 256 LEHPWITA 263
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 135/289 (46%), Gaps = 46/289 (15%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNA---FDNIIDARRTLREIKLLRHMEHENVIAIKDIIR 70
F + +N ET ++ A+K + A + RE + ++H +++ +++
Sbjct: 39 FSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV---ELLE 95
Query: 71 PPKKDTFNDVYIVYELMD-TDL--HQIIRSDQQL--TDDHCQYFLYQLLRGLKYVHSASV 125
D +Y+V+E MD DL + R+D ++ +++ Q+L L+Y H ++
Sbjct: 96 TYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 153
Query: 126 LHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEY-VVTRWYRAPELLLNCTEY 181
+HRD+KP +LL + S +K+G FG+A E+ + V T + APE++ Y
Sbjct: 154 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR-EPY 212
Query: 182 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 241
+D+W G IL +++ F Y + RL +I + +
Sbjct: 213 GKPVDVWGCGVILFILLSGCLPF----YGTKERLFEGII----------------KGKYK 252
Query: 242 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
PR ++ + S A DL+ +ML+ DP +RITV EAL HP+L+
Sbjct: 253 MNPR--------QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 108
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T+
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLC 167
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 168 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 221
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 222 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 255 LEHPWITA 262
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 135/289 (46%), Gaps = 46/289 (15%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNA---FDNIIDARRTLREIKLLRHMEHENVIAIKDIIR 70
F + +N ET ++ A+K + A + RE + ++H +++ +++
Sbjct: 37 FSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV---ELLE 93
Query: 71 PPKKDTFNDVYIVYELMD-TDL--HQIIRSDQQL--TDDHCQYFLYQLLRGLKYVHSASV 125
D +Y+V+E MD DL + R+D ++ +++ Q+L L+Y H ++
Sbjct: 94 TYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 126 LHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEY-VVTRWYRAPELLLNCTEY 181
+HRD+KP +LL + S +K+G FG+A E+ + V T + APE++ Y
Sbjct: 152 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR-EPY 210
Query: 182 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 241
+D+W G IL +++ F Y + RL +I + +
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPF----YGTKERLFEGII----------------KGKYK 250
Query: 242 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
PR ++ + S A DL+ +ML+ DP +RITV EAL HP+L+
Sbjct: 251 MNPR--------QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 83 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 134
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 135 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC 193
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 194 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 247
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 248 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 280
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 281 LEHPWITA 288
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 108
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T+
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLC 167
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 168 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 221
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 222 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 255 LEHPWITA 262
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 61 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSRFDEQ 112
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLC 171
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + P F Y R I+ +
Sbjct: 172 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV----- 225
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L + ++R+T+ E
Sbjct: 226 -------------------------EFT--FPDFVTEGARDLISRLLKHNASQRLTLAEV 258
Query: 284 LRHPYLQS 291
L HP++++
Sbjct: 259 LEHPWIKA 266
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 74 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 125
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 126 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC 184
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 185 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 238
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 239 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 271
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 272 LEHPWITA 279
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 108
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC 167
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 168 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 221
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 222 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 255 LEHPWITA 262
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 111
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC 170
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 171 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 224
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 225 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 258 LEHPWITA 265
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 62 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 113
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC 172
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 173 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 226
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 227 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 259
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 260 LEHPWITA 267
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 45/282 (15%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A++ ET + VAIK++ D + ++EI +++ + +V+ K+T D
Sbjct: 48 AIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDSPHVVKYYGSYF---KNT--D 98
Query: 80 VYIVYELMDT-DLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
++IV E + IIR ++ LT+D L L+GL+Y+H +HRD+K N+LL
Sbjct: 99 LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL 158
Query: 138 NASCDLKIGDFGLARTTSETDFMTE---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
N K+ DFG+A TD M + + T ++ APE++ Y DIWS+G
Sbjct: 159 NTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIG-YNCVADIWSLGITA 215
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
E+ +P P D +H +R I + +P P RK +
Sbjct: 216 IEMAEGKP--PYAD-IHPMRAIFMIPTNPP-------------------PTFRKPELW-- 251
Query: 255 FPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 296
S D +++ LV P +R T + L+HP+++S ++
Sbjct: 252 ----SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 108
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLC 167
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F
Sbjct: 168 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 206
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
A Y R + +F FP+ + GA DL+ ++L +P++R + E
Sbjct: 207 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 255 LEHPWITA 262
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 61 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 112
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC 171
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F
Sbjct: 172 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 210
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
A Y R + +F FP+ + GA DL+ ++L +P++R + E
Sbjct: 211 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 258
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 259 LEHPWITA 266
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 56 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 107
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 108 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC 166
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F
Sbjct: 167 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 205
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
A Y R + +F FP+ + GA DL+ ++L +P++R + E
Sbjct: 206 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 253
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 254 LEHPWITA 261
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 127/288 (44%), Gaps = 52/288 (18%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T +EVA+K I N ++ RE+++ + + H N++ + ++I +T +Y+V
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVI-----ETEKTLYLVX 92
Query: 85 ELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
E ++ + + + + + Q++ ++Y H ++HRDLK NLLL+A ++
Sbjct: 93 EYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNI 152
Query: 144 KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL 203
KI DFG + + + + + Y APEL +D+WS+G IL +++
Sbjct: 153 KIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 204 FPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP-NKSSGA 262
F G++ + EL R R + R P S+
Sbjct: 213 FDGQN-------LKEL-------------------------RERVLRGKYRIPFYXSTDC 240
Query: 263 VDLLEKMLVFDPNKRITVEEALR-------------HPYLQSLHDLND 297
+LL+K L+ +P+KR T+E+ + PY++ L D D
Sbjct: 241 ENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDELKPYVEPLPDYKD 288
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 62 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 113
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC 172
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE + + +D+WS+G + E + +P F Y + I+ +
Sbjct: 173 GTLDYLPPEXI-EGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 226
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 227 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPXLREV 259
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 260 LEHPWITA 267
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 41/264 (15%)
Query: 29 VAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYEL 86
VA+KK+ D RR L E+ ++R +HENV+ + + +++++V E
Sbjct: 179 VAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWVVMEF 229
Query: 87 MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
++ I + ++ ++ +L+ L +H+ V+HRD+K ++LL +K+
Sbjct: 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 289
Query: 147 DFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFP 205
DFG A+ + E V T ++ APEL+ Y +DIWS+G ++ E++ EP +
Sbjct: 290 DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYF 348
Query: 206 GKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDL 265
+ + +++I DN ++ L + S
Sbjct: 349 NEPPLKAMKMI----------------RDNLPPRLKNLHKV------------SPSLKGF 380
Query: 266 LEKMLVFDPNKRITVEEALRHPYL 289
L+++LV DP +R T E L+HP+L
Sbjct: 381 LDRLLVRDPAQRATAAELLKHPFL 404
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 111
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC 170
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F
Sbjct: 171 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 209
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
A Y R + +F FP+ + GA DL+ ++L +P++R + E
Sbjct: 210 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 258 LEHPWITA 265
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 120/280 (42%), Gaps = 54/280 (19%)
Query: 22 NSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
+ + E VA+K I G D + REI R + H N++ K++I P
Sbjct: 40 DKQANELVAVKYIERGEKIDENVK-----REIINHRSLRHPNIVRFKEVILTP-----TH 89
Query: 80 VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
+ IV E +L + I + + ++D ++F QL+ G+ Y H+ V HRDLK N LL+
Sbjct: 90 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLD 149
Query: 139 ASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI-DIWSVGCIL- 194
S LKI DFG ++ + V T Y APE+LL EY + D+WS G L
Sbjct: 150 GSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLK-KEYDGKVADVWSCGVTLY 208
Query: 195 ----GEIMTREPLFPGKDYVHQL-RLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
G +P P K++ + R++ PD YV P CR
Sbjct: 209 VMLVGAYPFEDPEEP-KNFRKTIHRILNVQYAIPD--------------YVHISPECRH- 252
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
L+ ++ V DP KRI++ E H +
Sbjct: 253 ---------------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL---TEKSACKSSDLWA 217
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 218 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 260
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 261 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 103
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 104 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 163
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL---TEKSACKSSDLWA 220
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 221 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 263
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 264 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 54 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 105
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 106 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLC 164
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F
Sbjct: 165 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 203
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
A Y R + +F FP+ + GA DL+ ++L +P++R + E
Sbjct: 204 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 251
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 252 LEHPWITA 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 58 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 109
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLS 168
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 169 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 222
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 223 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 255
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 256 LEHPWITA 263
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQ-- 107
EI L +H++H+N++ + ++ F +++ ++ L ++RS D+ Q
Sbjct: 55 EIALHKHLKHKNIV---QYLGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTI 110
Query: 108 -YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTE-YV 164
++ Q+L GLKY+H ++HRD+K N+L+N S LKI DFG ++ + + TE +
Sbjct: 111 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT 170
Query: 165 VTRWYRAPELL-LNCTEYTAAIDIWSVGCILGEIMTREPLF 204
T Y APE++ Y A DIWS+GC + E+ T +P F
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 219
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 262
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 263 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 37/251 (14%)
Query: 43 DARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQ 100
D EI ++ ++H N+I + D ++ ND+ +V E +D +II
Sbjct: 129 DKEEVKNEISVMNQLDHANLIQLYDAF-----ESKNDIVLVMEYVDGGELFDRIIDESYN 183
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETD 158
LT+ F+ Q+ G++++H +LH DLKP N+L + +KI DFGLAR +
Sbjct: 184 LTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243
Query: 159 FMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITE 218
+ T + APE ++N + D+WSVG I +++ F G
Sbjct: 244 KLKVNFGTPEFLAPE-VVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG------------ 290
Query: 219 LIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRI 278
DN + + CR F + S A + + K+L+ + + RI
Sbjct: 291 ---------------DNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRI 335
Query: 279 TVEEALRHPYL 289
+ EAL+HP+L
Sbjct: 336 SASEALKHPWL 346
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQ-- 107
EI L +H++H+N++ + ++ F +++ ++ L ++RS D+ Q
Sbjct: 69 EIALHKHLKHKNIV---QYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTI 124
Query: 108 -YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTE-YV 164
++ Q+L GLKY+H ++HRD+K N+L+N S LKI DFG ++ + + TE +
Sbjct: 125 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT 184
Query: 165 VTRWYRAPELL-LNCTEYTAAIDIWSVGCILGEIMTREPLF 204
T Y APE++ Y A DIWS+GC + E+ T +P F
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 103
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 104 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 163
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 220
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 221 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 263
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 264 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 37/225 (16%)
Query: 78 NDVYIVYELMDTDL----HQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKP 132
DV+I ELMDT L Q+I Q + +D +++ L+++HS SV+HRD+KP
Sbjct: 123 GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKP 182
Query: 133 SNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL---LNCTEYTAAIDIWS 189
SN+L+NA +K+ DFG++ ++ T + Y APE + LN Y+ DIWS
Sbjct: 183 SNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWS 242
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
+G + E+ FP + + + +++ P P+
Sbjct: 243 LGITMIELAILR--FPYDSWGTPFQQLKQVVEEPS-------------------PQLPAD 281
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
+F+ F VD + L + +R T E ++HP+ +LH+
Sbjct: 282 KFSAEF-------VDFTSQCLKKNSKERPTYPELMQHPFF-TLHE 318
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 149/329 (45%), Gaps = 50/329 (15%)
Query: 3 VKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENV 62
+K+ G+ F+ S+ R+ A+K + A + D RT E +L + H +
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 63 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 121
+ + + T +Y++ + + DL + + T++ +++L +L L ++H
Sbjct: 89 VKLHYAFQ-----TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 122 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCTE 180
S +++RDLKP N+LL+ +K+ DFGL++ + + + + T Y APE ++N
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVNRRG 202
Query: 181 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL-IGSPDDASLGFLRSDNARRY 239
+T + D WS G ++ E++T F GKD + +I + +G P FL S A+
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ-----FL-SPEAQSL 256
Query: 240 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-- 297
+R L + R P GA P+ VEE RH + ++ D N
Sbjct: 257 LRMLFK--------RNPANRLGA----------GPD---GVEEIKRHSFFSTI-DWNKLY 294
Query: 298 --------EPVCPRP---FHFDFEHSSCT 315
+P RP F+FD E ++ T
Sbjct: 295 RREIHPPFKPATGRPEDTFYFDPEFTAKT 323
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 219
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 262
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 263 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 66/289 (22%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 46 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 105
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 106 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 165
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 166 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 222
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
+GCI+ +++ P F R+ N +++ +
Sbjct: 223 LGCIIYQLVAGLPPF---------------------------RAGNEYLIFQKIIKLEYD 255
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
A FP A DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 256 FPAAFFPK----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 300
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 219
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 262
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 263 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 41/264 (15%)
Query: 29 VAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYEL 86
VA+KK+ D RR L E+ ++R +HENV+ + + +++++V E
Sbjct: 102 VAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMYN-----SYLVGDELWVVMEF 152
Query: 87 MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
++ I + ++ ++ +L+ L +H+ V+HRD+K ++LL +K+
Sbjct: 153 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 212
Query: 147 DFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFP 205
DFG A+ + E V T ++ APE L++ Y +DIWS+G ++ E++ EP +
Sbjct: 213 DFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 271
Query: 206 GKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDL 265
+ + +++I DN ++ L + S
Sbjct: 272 NEPPLKAMKMI----------------RDNLPPRLKNLHKV------------SPSLKGF 303
Query: 266 LEKMLVFDPNKRITVEEALRHPYL 289
L+++LV DP +R T E L+HP+L
Sbjct: 304 LDRLLVRDPAQRATAAELLKHPFL 327
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 217
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 218 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 260
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 261 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 83 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 134
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + +
Sbjct: 135 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLC 193
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 194 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 247
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 248 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 280
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 281 LEHPWITA 288
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 99
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 100 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 159
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL---TEKSACKSSDLWA 216
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 217 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 259
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 260 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 20 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 79
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 80 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 139
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 140 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 196
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 197 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 239
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 240 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 274
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 41/264 (15%)
Query: 29 VAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYEL 86
VA+KK+ D RR L E+ ++R +HENV+ + + +++++V E
Sbjct: 57 VAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMYN-----SYLVGDELWVVMEF 107
Query: 87 MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
++ I + ++ ++ +L+ L +H+ V+HRD+K ++LL +K+
Sbjct: 108 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 167
Query: 147 DFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFP 205
DFG A+ + E V T ++ APE L++ Y +DIWS+G ++ E++ EP +
Sbjct: 168 DFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 226
Query: 206 GKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDL 265
+ + +++I DN ++ L + S
Sbjct: 227 NEPPLKAMKMI----------------RDNLPPRLKNLHKV------------SPSLKGF 258
Query: 266 LEKMLVFDPNKRITVEEALRHPYL 289
L+++LV DP +R T E L+HP+L
Sbjct: 259 LDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 217
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 218 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 260
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 261 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 48 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQ 107
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 108 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 167
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 168 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 224
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 225 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 267
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 268 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 302
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 55/252 (21%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD--------TDLHQIIRSDQQ 100
RE+++ H+ H N++ + F+D VY +++ +L ++ + D+Q
Sbjct: 62 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPRGEVYKELQKLSKFDEQ 113
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 160
T ++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + +
Sbjct: 114 RTAT----YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRR 168
Query: 161 TEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 169 TTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV- 226
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRIT 279
+F FP+ + GA DL+ ++L +P++R
Sbjct: 227 -----------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPM 255
Query: 280 VEEALRHPYLQS 291
+ E L HP++ +
Sbjct: 256 LREVLEHPWITA 267
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 41/264 (15%)
Query: 29 VAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYEL 86
VA+KK+ D RR L E+ ++R +HENV+ + + +++++V E
Sbjct: 59 VAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMYN-----SYLVGDELWVVMEF 109
Query: 87 MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
++ I + ++ ++ +L+ L +H+ V+HRD+K ++LL +K+
Sbjct: 110 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 169
Query: 147 DFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFP 205
DFG A+ + E V T ++ APE L++ Y +DIWS+G ++ E++ EP +
Sbjct: 170 DFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 228
Query: 206 GKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDL 265
+ + +++I DN ++ L + S
Sbjct: 229 NEPPLKAMKMI----------------RDNLPPRLKNLHKV------------SPSLKGF 260
Query: 266 LEKMLVFDPNKRITVEEALRHPYL 289
L+++LV DP +R T E L+HP+L
Sbjct: 261 LDRLLVRDPAQRATAAELLKHPFL 284
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 19 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 78
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 79 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 138
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 139 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 195
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 196 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 238
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 239 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 25 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 84
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 85 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 144
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 145 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 201
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 202 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 244
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 245 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 279
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T EVA+K I N ++ RE+++++ + H N++ + ++I +T +Y+V
Sbjct: 39 TGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEKTLYLVM 93
Query: 85 ELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
E ++ + + ++ + + Q++ ++Y H ++HRDLK NLLL+ ++
Sbjct: 94 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNI 153
Query: 144 KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL 203
KI DFG + + + + + + Y APEL +D+WS+G IL +++
Sbjct: 154 KIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
Query: 204 FPGKD 208
F G++
Sbjct: 214 FDGQN 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 25 TREEVAIKKIGN----AFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV 80
T +VA+K + + D + +R ++ +KL RH ++I + +I P D
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH---PHIIKLYQVISTP-----TDF 86
Query: 81 YIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
++V E + +L I ++ + + Q+L + Y H V+HRDLKP N+LL+A
Sbjct: 87 FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA 146
Query: 140 SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ KI DFGL+ S+ +F+ + + Y APE++ +DIWS G IL ++
Sbjct: 147 HMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLC 206
Query: 200 REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKS 259
F D H L ++ G V +P + AT
Sbjct: 207 GTLPF---DDEHVPTLFKKIRGG-----------------VFYIPEYLNRSVAT------ 240
Query: 260 SGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
LL ML DP KR T+++ H + +
Sbjct: 241 -----LLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 21 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 80
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 81 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 140
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 141 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 197
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 198 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 240
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 241 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 275
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 99
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 100 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 159
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 216
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 217 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 259
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 260 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 18 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 77
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 78 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 137
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 138 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 194
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 195 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 237
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 238 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 272
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 59 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 110
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI +FG + + + T
Sbjct: 111 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLC 169
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 170 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 223
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 224 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 256
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 257 LEHPWITA 264
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 41/264 (15%)
Query: 29 VAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYEL 86
VA+KK+ D RR L E+ ++R +HENV+ + + +++++V E
Sbjct: 48 VAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMYN-----SYLVGDELWVVMEF 98
Query: 87 MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
++ I + ++ ++ +L+ L +H+ V+HRD+K ++LL +K+
Sbjct: 99 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 158
Query: 147 DFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFP 205
DFG A+ + E V T ++ APE L++ Y +DIWS+G ++ E++ EP +
Sbjct: 159 DFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 217
Query: 206 GKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDL 265
+ + +++I DN ++ L + S
Sbjct: 218 NEPPLKAMKMI----------------RDNLPPRLKNLHKV------------SPSLKGF 249
Query: 266 LEKMLVFDPNKRITVEEALRHPYL 289
L+++LV DP +R T E L+HP+L
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFL 273
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 122/280 (43%), Gaps = 54/280 (19%)
Query: 22 NSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
+ ++ E VA+K I G D + REI R + H N++ K++I P
Sbjct: 39 DKQSNELVAVKYIERGEKIDENVK-----REIINHRSLRHPNIVRFKEVILTPTH----- 88
Query: 80 VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
+ IV E +L + I + + ++D ++F QL+ G+ Y H+ V HRDLK N LL+
Sbjct: 89 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 148
Query: 139 ASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI-DIWSVGCIL- 194
S LKI DFG ++++ V T Y APE+LL EY + D+WS G L
Sbjct: 149 GSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLK-KEYDGKVADVWSCGVTLY 207
Query: 195 ----GEIMTREPLFPGKDYVHQL-RLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
G +P P K++ + R++ PD YV P CR
Sbjct: 208 VMLVGAYPFEDPEEP-KNFRKTIHRILNVQYAIPD--------------YVHISPECRH- 251
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
L+ ++ V DP KRI++ E H +
Sbjct: 252 ---------------LISRIFVADPAKRISIPEIRNHEWF 276
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 41/264 (15%)
Query: 29 VAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYEL 86
VA+KK+ D RR L E+ ++R +HENV+ + + +++++V E
Sbjct: 52 VAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMYN-----SYLVGDELWVVMEF 102
Query: 87 MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
++ I + ++ ++ +L+ L +H+ V+HRD+K ++LL +K+
Sbjct: 103 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 162
Query: 147 DFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFP 205
DFG A+ + E V T ++ APE L++ Y +DIWS+G ++ E++ EP +
Sbjct: 163 DFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 221
Query: 206 GKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDL 265
+ + +++I DN ++ L + S
Sbjct: 222 NEPPLKAMKMI----------------RDNLPPRLKNLHKV------------SPSLKGF 253
Query: 266 LEKMLVFDPNKRITVEEALRHPYL 289
L+++LV DP +R T E L+HP+L
Sbjct: 254 LDRLLVRDPAQRATAAELLKHPFL 277
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 111
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + +
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALC 170
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 171 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 224
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 225 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 258 LEHPWITA 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 51/250 (20%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 61 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSRFDEQ 112
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA--RTTSETDFMTE 162
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + +S D +
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCG 172
Query: 163 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGS 222
T Y PE++ + +D+WS+G + E + P F Y R I+ +
Sbjct: 173 ---TLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV--- 225
Query: 223 PDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVE 281
+F FP+ + GA DL+ ++L + ++R+T+
Sbjct: 226 ---------------------------EFT--FPDFVTEGARDLISRLLKHNASQRLTLA 256
Query: 282 EALRHPYLQS 291
E L HP++++
Sbjct: 257 EVLEHPWIKA 266
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 130/297 (43%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 37 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 82
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 83 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 142
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +TE T +Y APE +L +Y + D+W
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPE-VLGPEKYDKSCDMW 201
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 202 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 235
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 236 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 290
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 111
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + + +
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLC 170
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F
Sbjct: 171 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 209
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
A Y R + +F FP+ + GA DL+ ++L +P++R + E
Sbjct: 210 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 258 LEHPWITA 265
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 111
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI +FG + + + T
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLC 170
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F
Sbjct: 171 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 209
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
A Y R + +F FP+ + GA DL+ ++L +P++R + E
Sbjct: 210 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 258 LEHPWITA 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 59 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 110
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + +
Sbjct: 111 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLC 169
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 170 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----- 223
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
+F FP+ + GA DL+ ++L +P++R + E
Sbjct: 224 -------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 256
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 257 LEHPWITA 264
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 108
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + +
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALC 167
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F
Sbjct: 168 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 206
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
A Y R + +F FP+ + GA DL+ ++L +P++R + E
Sbjct: 207 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 255 LEHPWITA 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 51/250 (20%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 58 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 109
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA--RTTSETDFMTE 162
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + +S D +
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCG 169
Query: 163 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGS 222
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 170 ---TLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--- 222
Query: 223 PDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVE 281
+F FP+ + GA DL+ ++L +P++R +
Sbjct: 223 ---------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLR 253
Query: 282 EALRHPYLQS 291
E L HP++ +
Sbjct: 254 EVLEHPWITA 263
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 122/278 (43%), Gaps = 50/278 (17%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
+ ++ E VA+K I + I A REI R + H N++ K++I P +
Sbjct: 40 DKQSNELVAVKYIERG-EKI--AANVKREIINHRSLRHPNIVRFKEVILTPTH-----LA 91
Query: 82 IVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
IV E +L + I + + ++D ++F QL+ G+ Y H+ V HRDLK N LL+ S
Sbjct: 92 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS 151
Query: 141 CD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI-DIWSVGCIL--- 194
LKI DFG ++++ V T Y APE+LL EY + D+WS G L
Sbjct: 152 PAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLK-KEYDGKVADVWSCGVTLYVM 210
Query: 195 --GEIMTREPLFPGKDYVHQL-RLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQF 251
G +P P K++ + R++ PD YV P CR
Sbjct: 211 LVGAYPFEDPEEP-KNFRKTIHRILNVQYAIPD--------------YVHISPECRH--- 252
Query: 252 ATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
L+ ++ V DP KRI++ E H +
Sbjct: 253 -------------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 108
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + +
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLC 167
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F
Sbjct: 168 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 206
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
A Y R + +F FP+ + GA DL+ ++L +P++R + E
Sbjct: 207 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 255 LEHPWITA 262
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 44/272 (16%)
Query: 25 TREEVAIKKIGN----AFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV 80
T +VA+K + + D + +R ++ +KL RH ++I + +I P D
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH---PHIIKLYQVISTP-----TDF 86
Query: 81 YIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
++V E + +L I ++ + + Q+L + Y H V+HRDLKP N+LL+A
Sbjct: 87 FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA 146
Query: 140 SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ KI DFGL+ S+ +F+ + Y APE++ +DIWS G IL ++
Sbjct: 147 HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLC 206
Query: 200 REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKS 259
F D H L ++ G V +P + AT
Sbjct: 207 GTLPF---DDEHVPTLFKKIRGG-----------------VFYIPEYLNRSVAT------ 240
Query: 260 SGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
LL ML DP KR T+++ H + +
Sbjct: 241 -----LLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 34/218 (15%)
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
N +++ L DL I+S + ++ +++ GL+++HS +++RDLK N+LL
Sbjct: 93 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 152
Query: 138 NASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
+ +KI DFG+ + D T E+ T Y APE+LL +Y ++D WS G +L E
Sbjct: 153 DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYE 211
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++ + F G+D EL S +R DN F R+
Sbjct: 212 MLIGQSPFHGQDE-------EELFHS--------IRMDNP--------------FYPRWL 242
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALR-HPYLQSLH 293
K A DLL K+ V +P KR+ V +R HP + ++
Sbjct: 243 EKE--AKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 278
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 47/217 (21%)
Query: 88 DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGD 147
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N+LLN ++I D
Sbjct: 114 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
Query: 148 FGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWSVGCILGEIMTREP 202
FG A+ S+ +V T Y +PELL TE +A + D+W++GCI+ +++ P
Sbjct: 174 FGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 203 LF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSG 261
F G +Y+ ++I L D ++ P+ R
Sbjct: 231 PFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR-------------- 260
Query: 262 AVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 261 --DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 111
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + +
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLC 170
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F
Sbjct: 171 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 209
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
A Y R + +F FP+ + GA DL+ ++L +P++R + E
Sbjct: 210 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 258 LEHPWITA 265
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 127/267 (47%), Gaps = 34/267 (12%)
Query: 25 TREEVAIKKIG--NAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYI 82
T E+VA+K + + ++I D ++ EI++LR++ HEN++ K I +D N + +
Sbjct: 49 TGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGICT---EDGGNGIKL 102
Query: 83 VYELMDT-DLHQIIRSDQQLTDDHCQY-FLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
+ E + + L + + ++ + Q + Q+ +G+ Y+ S +HRDL N+L+ +
Sbjct: 103 IMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE 162
Query: 141 CDLKIGDFGLARTTSETDFMTEYVV------TRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+KIGDFGL + ETD V WY APE L+ Y A+ D+WS G L
Sbjct: 163 HQVKIGDFGLTKAI-ETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIAS-DVWSFGVTL 219
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
E++T + D + L ++IG P + R N + ++LP C
Sbjct: 220 HELLT----YCDSD-SSPMALFLKMIG-PTHGQMTVTRLVNTLKEGKRLP-CP------- 265
Query: 255 FPNKSSGAVDLLEKMLVFDPNKRITVE 281
PN L+ K F P+ R + +
Sbjct: 266 -PNCPDEVYQLMRKCWEFQPSNRTSFQ 291
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 103 DDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL---TEKSASKSSDLWA 219
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G +Y+ ++I L D ++ P+ R
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF---FPKAR- 262
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 263 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 112/224 (50%), Gaps = 9/224 (4%)
Query: 3 VKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENV 62
+K+ G+ F+ S+ R+ A+K + A + D RT E +L + H +
Sbjct: 30 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 89
Query: 63 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 121
+ + + T +Y++ + + DL + + T++ +++L +L L ++H
Sbjct: 90 VKLHYAFQ-----TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 122 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCTE 180
S +++RDLKP N+LL+ +K+ DFGL++ + + + + T Y APE ++N
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVNRRG 203
Query: 181 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL-IGSP 223
+T + D WS G ++ E++T F GKD + +I + +G P
Sbjct: 204 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 112/224 (50%), Gaps = 9/224 (4%)
Query: 3 VKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENV 62
+K+ G+ F+ S+ R+ A+K + A + D RT E +L + H +
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 63 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 121
+ + + T +Y++ + + DL + + T++ +++L +L L ++H
Sbjct: 89 VKLHYAFQ-----TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 122 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCTE 180
S +++RDLKP N+LL+ +K+ DFGL++ + + + + T Y APE ++N
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVNRRG 202
Query: 181 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL-IGSP 223
+T + D WS G ++ E++T F GKD + +I + +G P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 47/248 (18%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DD 104
RE+++ H+ H N++ + F+D VY +++ L + R Q+L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGY--------FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQ 108
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + +
Sbjct: 109 RTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALC 167
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 224
T Y PE++ + +D+WS+G + E + +P F Y
Sbjct: 168 GTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------------- 211
Query: 225 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEA 283
D +R R +F FP+ + GA DL+ ++L +P++R + E
Sbjct: 212 --------QDTYKRISRV-------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
Query: 284 LRHPYLQS 291
L HP++ +
Sbjct: 255 LEHPWITA 262
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 127/267 (47%), Gaps = 34/267 (12%)
Query: 25 TREEVAIKKIG--NAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYI 82
T E+VA+K + + ++I D ++ EI++LR++ HEN++ K I +D N + +
Sbjct: 37 TGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGIC---TEDGGNGIKL 90
Query: 83 VYELMDT-DLHQIIRSDQQLTDDHCQY-FLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
+ E + + L + + ++ + Q + Q+ +G+ Y+ S +HRDL N+L+ +
Sbjct: 91 IMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE 150
Query: 141 CDLKIGDFGLARTTSETDFMTEYVV------TRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+KIGDFGL + ETD V WY APE L+ Y A+ D+WS G L
Sbjct: 151 HQVKIGDFGLTKAI-ETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIAS-DVWSFGVTL 207
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
E++T + D + L ++IG P + R N + ++LP C
Sbjct: 208 HELLT----YCDSD-SSPMALFLKMIG-PTHGQMTVTRLVNTLKEGKRLP-CP------- 253
Query: 255 FPNKSSGAVDLLEKMLVFDPNKRITVE 281
PN L+ K F P+ R + +
Sbjct: 254 -PNCPDEVYQLMRKCWEFQPSNRTSFQ 279
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 98/190 (51%), Gaps = 16/190 (8%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
++E + IK+I + + + + RE+ +L +M+H N++ ++ +F +
Sbjct: 45 STEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE--------SFEENG 96
Query: 82 IVYELMD----TDLHQIIRSDQQL--TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
+Y +MD DL + I + + + +D + Q+ LK+VH +LHRD+K N+
Sbjct: 97 SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNI 156
Query: 136 LLNASCDLKIGDFGLARTTSET-DFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
L +++GDFG+AR + T + + T +Y +PE+ N Y DIW++GC+L
Sbjct: 157 FLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICEN-KPYNNKSDIWALGCVL 215
Query: 195 GEIMTREPLF 204
E+ T + F
Sbjct: 216 YELCTLKHAF 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 49/286 (17%)
Query: 30 AIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI-------KDIIRP----PKKDTFN 78
AIKKI + + + L E+ LL + H+ V+ ++ ++P KK T
Sbjct: 35 AIKKIRHTEEKL---STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST-- 89
Query: 79 DVYIVYELMDTD-LHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
++I E + L+ +I S+ Q D++ + F Q+L L Y+HS ++HRDLKP N+
Sbjct: 90 -LFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF-RQILEALSYIHSQGIIHRDLKPMNI 147
Query: 136 LLNASCDLKIGDFGLARTT---------------SETDFMTEYVVTRWYRAPELLLNCTE 180
++ S ++KIGDFGLA+ +D +T + T Y A E+L
Sbjct: 148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGH 207
Query: 181 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL-IGSPDDASLGFLRSDNARRY 239
Y ID++S+G I E++ P G + V+ L+ + + I P D DN +
Sbjct: 208 YNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKLRSVSIEFPPDF------DDNKMKV 259
Query: 240 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+++ R PNK GA LL + ++ ++EAL+
Sbjct: 260 EKKIIRL----LIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALK 301
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 113/252 (44%), Gaps = 55/252 (21%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD--------TDLHQIIRSDQQ 100
RE+++ H+ H N++ + F+D VY +++ +L ++ + D+Q
Sbjct: 62 REVEIQSHLRHPNILRLYGY--------FHDATRVYLILEYAPRGEVYKELQKLSKFDEQ 113
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 160
T ++ +L L Y HS V+HRD+KP NLLL ++ +LKI DFG + + +
Sbjct: 114 RTAT----YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRR 168
Query: 161 TEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 220
T Y PE++ + +D+WS+G + E + +P F Y + I+ +
Sbjct: 169 XXLXGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV- 226
Query: 221 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRIT 279
+F FP+ + GA DL+ ++L +P++R
Sbjct: 227 -----------------------------EFT--FPDFVTEGARDLISRLLKHNPSQRPM 255
Query: 280 VEEALRHPYLQS 291
+ E L HP++ +
Sbjct: 256 LREVLEHPWITA 267
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVV 165
+ Q+L G+ Y+H +++H DLKP N+LL++ D+KI DFG++R + E +
Sbjct: 136 LIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMG 195
Query: 166 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDD 225
T Y APE+L N T A D+W++G I ++T F G+D
Sbjct: 196 TPEYLAPEIL-NYDPITTATDMWNIGIIAYMLLTHTSPFVGED----------------- 237
Query: 226 ASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
N Y+ + + F + S A D ++ +LV +P KR T E L
Sbjct: 238 ---------NQETYLN-ISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287
Query: 286 HPYLQ 290
H +LQ
Sbjct: 288 HSWLQ 292
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 49/286 (17%)
Query: 30 AIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI-------KDIIRP----PKKDTFN 78
AIKKI + + + L E+ LL + H+ V+ ++ ++P KK T
Sbjct: 35 AIKKIRHTEEKL---STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST-- 89
Query: 79 DVYIVYELMDT-DLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
++I E + L+ +I S+ Q D++ + F Q+L L Y+HS ++HRDLKP N+
Sbjct: 90 -LFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF-RQILEALSYIHSQGIIHRDLKPMNI 147
Query: 136 LLNASCDLKIGDFGLARTT---------------SETDFMTEYVVTRWYRAPELLLNCTE 180
++ S ++KIGDFGLA+ +D +T + T Y A E+L
Sbjct: 148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGH 207
Query: 181 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL-IGSPDDASLGFLRSDNARRY 239
Y ID++S+G I E++ P G + V+ L+ + + I P D DN +
Sbjct: 208 YNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKLRSVSIEFPPDF------DDNKMKV 259
Query: 240 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+++ R PNK GA LL + ++ ++EAL+
Sbjct: 260 EKKIIRL----LIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALK 301
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 43 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 88
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 89 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 148
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +T T +Y APE +L +Y + D+W
Sbjct: 149 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 207
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 208 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 241
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 242 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 296
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 64/288 (22%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVG 191
+LLN ++I DFG A+ S+ +V T Y +PELL + ++ D+W++G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSS-DLWALG 221
Query: 192 CILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQ 250
CI+ +++ P F G + + ++I L D ++ P+ R
Sbjct: 222 CIIYQLVAGLPPFRAGNEGLIFAKIIK-------------LEYDFPEKF---FPKAR--- 262
Query: 251 FATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 263 -------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 45 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 90
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 91 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 150
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +T T +Y APE +L +Y + D+W
Sbjct: 151 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 209
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 210 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 243
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 244 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 298
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 38 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 83
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 84 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 143
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +T T +Y APE +L +Y + D+W
Sbjct: 144 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 202
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 203 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 236
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 237 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 291
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 68/290 (23%)
Query: 36 NAFDNIIDARR--TLRE--IKLL--RHMEHENVIAI----KDIIRPPKKDTFNDVYIVYE 85
+F ++ AR T RE IK+L RH+ EN + +D++ F +Y ++
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 86 -----------LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
+ +L + IR + +++ +++ L+Y+H ++HRDLKP N
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 135 LLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYTA--AIDIWS 189
+LLN ++I DFG A+ S+ +V T Y +PELL TE +A + D+W+
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSACKSSDLWA 219
Query: 190 VGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
+GCI+ +++ P F G + + ++I L D ++ P+ R
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEGLIFAKIIK-------------LEYDFPEKF---FPKAR- 262
Query: 249 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 292
DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 263 ---------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 53 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 98
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 99 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 158
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +T T +Y APE +L +Y + D+W
Sbjct: 159 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 217
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 218 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 251
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 252 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 306
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 44 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 89
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 90 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 149
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +T T +Y APE +L +Y + D+W
Sbjct: 150 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 208
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 209 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 242
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 243 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 297
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 122/280 (43%), Gaps = 54/280 (19%)
Query: 22 NSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
+ ++ E VA+K I G D + REI R + H N++ K++I P
Sbjct: 40 DKQSNELVAVKYIERGEKIDENVK-----REIINHRSLRHPNIVRFKEVILTPTH----- 89
Query: 80 VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
+ IV E +L + I + + ++D ++F QL+ G+ Y H+ V HRDLK N LL+
Sbjct: 90 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 149
Query: 139 ASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI-DIWSVGCIL- 194
S LKI FG ++++ + V T Y APE+LL EY + D+WS G L
Sbjct: 150 GSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLK-KEYDGKVADVWSCGVTLY 208
Query: 195 ----GEIMTREPLFPGKDYVHQL-RLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
G +P P K++ + R++ PD YV P CR
Sbjct: 209 VMLVGAYPFEDPEEP-KNFRKTIHRILNVQYAIPD--------------YVHISPECRH- 252
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
L+ ++ V DP KRI++ E H +
Sbjct: 253 ---------------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 2 SVKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 61
V GEY D ++ R + AIK + + LRE L+R + H N
Sbjct: 35 GVVYHGEYID----------QAQNRIQCAIKSLSR-ITEMQQVEAFLREGLLMRGLNHPN 83
Query: 62 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQ-LTDDHCQYFLYQLLRGLKYV 120
V+A+ I+ PP + V + Y + DL Q IRS Q+ T F Q+ RG++Y+
Sbjct: 84 VLALIGIMLPP--EGLPHVLLPY-MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140
Query: 121 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT- 179
+HRDL N +L+ S +K+ DFGLAR + EY + +R L + T
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILD----REYYSVQQHRHARLPVKWTA 196
Query: 180 -------EYTAAIDIWSVGCILGEIMTR 200
+T D+WS G +L E++TR
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTR 224
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 37 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 82
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 83 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 142
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +T T +Y APE +L +Y + D+W
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 201
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 202 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 235
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 236 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 290
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 39 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 84
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 85 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 144
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +T T +Y APE +L +Y + D+W
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 203
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 204 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 237
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 238 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 292
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 121/280 (43%), Gaps = 54/280 (19%)
Query: 22 NSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
+ ++ E VA+K I G D + REI R + H N++ K++I P
Sbjct: 40 DKQSNELVAVKYIERGEKIDENVK-----REIINHRSLRHPNIVRFKEVILTPTH----- 89
Query: 80 VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
+ IV E +L + I + + ++D ++F QL+ G+ Y H+ V HRDLK N LL+
Sbjct: 90 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 149
Query: 139 ASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI-DIWSVGCIL- 194
S LKI FG ++++ V T Y APE+LL EY + D+WS G L
Sbjct: 150 GSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLK-KEYDGKVADVWSCGVTLY 208
Query: 195 ----GEIMTREPLFPGKDYVHQL-RLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
G +P P K++ + R++ PD YV P CR
Sbjct: 209 VMLVGAYPFEDPEEP-KNFRKTIHRILNVQYAIPD--------------YVHISPECRH- 252
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
L+ ++ V DP KRI++ E H +
Sbjct: 253 ---------------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 39 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 84
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 85 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 144
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +T T +Y APE +L +Y + D+W
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 203
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 204 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 237
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 238 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 292
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 41/253 (16%)
Query: 43 DARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQ 100
D +EI+ + + H ++ + D + N++ ++YE M ++ +
Sbjct: 197 DKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADEHNK 251
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA--SCDLKIGDFGLARTTSETD 158
+++D ++ Q+ +GL ++H + +H DLKP N++ S +LK+ DFGL
Sbjct: 252 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311
Query: 159 FMTEYVVTRWYRAPELLLN--CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLI 216
+ T + APE+ YT D+WSVG +L I+ L +
Sbjct: 312 SVKVTTGTAEFAAPEVAEGKPVGYYT---DMWSVG-VLSYIL--------------LSGL 353
Query: 217 TELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNK 276
+ G DD +L R + C + F S D + K+L+ DPN
Sbjct: 354 SPFGGENDDETL------------RNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT 401
Query: 277 RITVEEALRHPYL 289
R+T+ +AL HP+L
Sbjct: 402 RMTIHQALEHPWL 414
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 34/218 (15%)
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
N +++ L DL I+S + ++ +++ GL+++HS +++RDLK N+LL
Sbjct: 92 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 151
Query: 138 NASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
+ +KI DFG+ + D T + T Y APE+LL +Y ++D WS G +L E
Sbjct: 152 DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYE 210
Query: 197 IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP 256
++ + F G+D EL S +R DN F R+
Sbjct: 211 MLIGQSPFHGQDE-------EELFHS--------IRMDNP--------------FYPRWL 241
Query: 257 NKSSGAVDLLEKMLVFDPNKRITVEEALR-HPYLQSLH 293
K A DLL K+ V +P KR+ V +R HP + ++
Sbjct: 242 EKE--AKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 83 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 128
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 129 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 188
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +T T +Y APE +L +Y + D+W
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 247
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 248 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 281
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 282 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 336
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 55/294 (18%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
RG + ++ AV TR A KKI F + D R +EI++++ ++H N+I +
Sbjct: 36 RGSWGEV-----KIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRL 88
Query: 66 KDIIRPPKKDTFNDVYIVYEL-MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 124
+ + D+Y+V EL +L + + + + + +L + Y H +
Sbjct: 89 YETF-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 143
Query: 125 VLHRDLKPSN-LLLNASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 181
V HRDLKP N L L S D LK+ DFGLA M V T +Y +P++L Y
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL--Y 201
Query: 182 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 241
D WS G ++ ++ P F +P D +
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPF----------------SAPTDXEV------------- 232
Query: 242 QLPRCRKQQFATRFPNK-----SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ + R+ F FP K S A L+ ++L P +RIT +AL H + +
Sbjct: 233 -MLKIREGTFT--FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 41/253 (16%)
Query: 43 DARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQ 100
D +EI+ + + H ++ + D + N++ ++YE M ++ +
Sbjct: 91 DKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADEHNK 145
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA--SCDLKIGDFGLARTTSETD 158
+++D ++ Q+ +GL ++H + +H DLKP N++ S +LK+ DFGL
Sbjct: 146 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 205
Query: 159 FMTEYVVTRWYRAPELLLN--CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLI 216
+ T + APE+ YT D+WSVG +L I+ L +
Sbjct: 206 SVKVTTGTAEFAAPEVAEGKPVGYYT---DMWSVG-VLSYIL--------------LSGL 247
Query: 217 TELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNK 276
+ G DD +L R + C + F S D + K+L+ DPN
Sbjct: 248 SPFGGENDDETL------------RNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT 295
Query: 277 RITVEEALRHPYL 289
R+T+ +AL HP+L
Sbjct: 296 RMTIHQALEHPWL 308
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 55/294 (18%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
RG + ++ AV TR A KKI F + D R +EI++++ ++H N+I +
Sbjct: 19 RGSWGEV-----KIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRL 71
Query: 66 KDIIRPPKKDTFNDVYIVYEL-MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 124
+ + D+Y+V EL +L + + + + + +L + Y H +
Sbjct: 72 YETF-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 126
Query: 125 VLHRDLKPSN-LLLNASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 181
V HRDLKP N L L S D LK+ DFGLA M V T +Y +P++L Y
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL--Y 184
Query: 182 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 241
D WS G ++ ++ P F +P D +
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPF----------------SAPTDXEV------------- 215
Query: 242 QLPRCRKQQFATRFPNK-----SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
+ + R+ F FP K S A L+ ++L P +RIT +AL H + +
Sbjct: 216 -MLKIREGTFT--FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 89 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 134
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 135 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 194
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +T T +Y APE +L +Y + D+W
Sbjct: 195 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 253
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 254 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 287
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 288 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 342
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 18/254 (7%)
Query: 15 FIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK 74
F+ ++ A+K + A + D RT E +L + H V+ + +
Sbjct: 45 FLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQ---- 100
Query: 75 DTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
T +Y++ + + DL + + T++ +++L +L GL ++HS +++RDLKP
Sbjct: 101 -TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPE 159
Query: 134 NLLLNASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
N+LL+ +K+ DFGL++ + + + T Y APE ++N ++ + D WS G
Sbjct: 160 NILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE-VVNRQGHSHSADWWSYGV 218
Query: 193 ILGEIMTREPLFPGKDYVHQLRLITEL-IGSPDDASLGFLRSDNARRYVRQLPRCRKQQF 251
++ E++T F GKD + LI + +G P FL S A+ +R L K+
Sbjct: 219 LMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ-----FL-STEAQSLLRAL---FKRNP 269
Query: 252 ATRFPNKSSGAVDL 265
A R + GA ++
Sbjct: 270 ANRLGSGPDGAEEI 283
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 35/255 (13%)
Query: 42 IDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLH-QIIRSDQQ 100
+D EI ++ + H +I + D +D + V I+ L +L +I D +
Sbjct: 90 LDKYTVKNEISIMNQLHHPKLINLHDAF----EDKYEMVLILEFLSGGELFDRIAAEDYK 145
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL--LNASCDLKIGDFGLARTTSETD 158
+++ ++ Q GLK++H S++H D+KP N++ + +KI DFGLA + +
Sbjct: 146 MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205
Query: 159 FMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITE 218
+ T + APE++ + D+W++G + +++ F G+D + L+
Sbjct: 206 IVKVTTATAEFAAPEIV-DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ---- 260
Query: 219 LIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRI 278
+ RC + F + S A D ++ +L +P KR+
Sbjct: 261 -----------------------NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL 297
Query: 279 TVEEALRHPYLQSLH 293
TV +AL HP+L+ H
Sbjct: 298 TVHDALEHPWLKGDH 312
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 37/225 (16%)
Query: 78 NDVYIVYELMDTDL----HQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKP 132
DV+I ELMDT L Q+I Q + +D +++ L+++HS SV+HRD+KP
Sbjct: 79 GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKP 138
Query: 133 SNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL---LNCTEYTAAIDIWS 189
SN+L+NA +K+ DFG++ + + Y APE + LN Y+ DIWS
Sbjct: 139 SNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWS 198
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
+G + E+ FP + + + +++ P P+
Sbjct: 199 LGITMIELAILR--FPYDSWGTPFQQLKQVVEEPS-------------------PQLPAD 237
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
+F+ F VD + L + +R T E ++HP+ +LH+
Sbjct: 238 KFSAEF-------VDFTSQCLKKNSKERPTYPELMQHPFF-TLHE 274
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 49/286 (17%)
Query: 30 AIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI-------KDIIRP----PKKDTFN 78
AIKKI + + + L E+ LL + H+ V+ ++ ++P KK T
Sbjct: 35 AIKKIRHTEEKL---STILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKST-- 89
Query: 79 DVYIVYELMDT-DLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
++I E + L+ +I S+ Q D++ + F Q+L L Y+HS ++HR+LKP N+
Sbjct: 90 -LFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF-RQILEALSYIHSQGIIHRNLKPXNI 147
Query: 136 LLNASCDLKIGDFGLARTT---------------SETDFMTEYVVTRWYRAPELLLNCTE 180
++ S ++KIGDFGLA+ +D +T + T Y A E+L
Sbjct: 148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGH 207
Query: 181 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL-IGSPDDASLGFLRSDNARRY 239
Y ID +S+G I E + P G + V+ L+ + + I P D DN +
Sbjct: 208 YNEKIDXYSLGIIFFEXIY--PFSTGXERVNILKKLRSVSIEFPPDF------DDNKXKV 259
Query: 240 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 285
+++ R PNK GA LL + ++ ++EAL+
Sbjct: 260 EKKIIRL----LIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALK 301
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 53/283 (18%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLR------EIKLLRHMEHENVIAI-KDI 68
I A + +VA+K ++D R+ R E+ ++R +H NV+ + K
Sbjct: 60 IVCLAREKHSGRQVAVK--------MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 69 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 128
+ +++++ E + I S +L ++ +L+ L Y+H+ V+HR
Sbjct: 112 L------VGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 129 DLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDI 187
D+K ++LL +K+ DFG A+ + + V T ++ APE +++ + Y +DI
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPE-VISRSLYATEVDI 224
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
WS+G ++ E++ EP + V ++ + + SP P+ +
Sbjct: 225 WSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SPP-------------------PKLK 262
Query: 248 KQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYL 289
+K S + D LE+MLV DP +R T +E L HP+L
Sbjct: 263 NS-------HKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 57/262 (21%)
Query: 77 FNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
++ + +++E + L++II + + + + ++L+ L Y+ S+ H DLKP N
Sbjct: 108 YDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPEN 167
Query: 135 LLLN-------------------------ASCDLKIGDFGLARTTSETDFMTEYVVTRWY 169
+LL+ S +K+ DFG A T ++D+ + TR Y
Sbjct: 168 ILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA--TFKSDYHGSIINTRQY 225
Query: 170 RAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLG 229
RAPE++LN + + D+WS GC+L E+ T LF +++ L ++ +I L
Sbjct: 226 RAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLY 284
Query: 230 FLRSDNARRYVRQLPRCRKQQFATRFPNKSSGA---------------------VDLLEK 268
N +YV K + +P +S D L
Sbjct: 285 EATKTNGSKYV------NKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYS 338
Query: 269 MLVFDPNKRITVEEALRHPYLQ 290
+L DP R + E L+H +L+
Sbjct: 339 ILQIDPTLRPSPAELLKHKFLE 360
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
++I+ E + + L + + L ++L+GL Y+HS +HRD+K +N+LL+
Sbjct: 92 LWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE 151
Query: 140 SCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
D+K+ DFG+A ++T +V T ++ APE ++ + Y DIWS+G E+
Sbjct: 152 QGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDFKADIWSLGITAIELA 210
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL----PRCR------- 247
EP P D +H +R++ LI +L S + +V PR R
Sbjct: 211 KGEP--PNSD-LHPMRVLF-LIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELL 266
Query: 248 KQQFATRFPNKSSGAVDLLEK 268
K +F TR+ K+S +L+++
Sbjct: 267 KHKFITRYTKKTSFLTELIDR 287
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 11/194 (5%)
Query: 21 VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV 80
++ +T E+VAIK+ R L EI++++ + H NV++ +++ +K ND+
Sbjct: 35 IHQDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 93
Query: 81 -YIVYELMDT-DLHQIIRSDQQ---LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
+ E + DL + + + L + + L + L+Y+H ++HRDLKP N+
Sbjct: 94 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI 153
Query: 136 LLNASCDL---KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
+L KI D G A+ + + TE+V T Y APELL +YT +D WS G
Sbjct: 154 VLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ-KKYTVTVDYWSFGT 212
Query: 193 ILGEIMTR-EPLFP 205
+ E +T P P
Sbjct: 213 LAFECITGFRPFLP 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 11/194 (5%)
Query: 21 VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV 80
++ +T E+VAIK+ R L EI++++ + H NV++ +++ +K ND+
Sbjct: 34 IHQDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92
Query: 81 -YIVYELMDT-DLHQIIRSDQQ---LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
+ E + DL + + + L + + L + L+Y+H ++HRDLKP N+
Sbjct: 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI 152
Query: 136 LLNASCDL---KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
+L KI D G A+ + + TE+V T Y APELL +YT +D WS G
Sbjct: 153 VLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ-KKYTVTVDYWSFGT 211
Query: 193 ILGEIMTR-EPLFP 205
+ E +T P P
Sbjct: 212 LAFECITGFRPFLP 225
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAF--DNIIDARRTLREIKLLRHMEHENVI 63
+G Y + F + T + A+K + A N D T E +L ++H ++
Sbjct: 27 KGGYGKV--FQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 64 AIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 122
D+I + T +Y++ E L +L + + +D ++L ++ L ++H
Sbjct: 85 ---DLIYAFQ--TGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ 139
Query: 123 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEY 181
+++RDLKP N++LN +K+ DFGL + + +T + T Y APE+L+ + +
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMR-SGH 198
Query: 182 TAAIDIWSVGCILGEIMTREPLFPGKD 208
A+D WS+G ++ +++T P F G++
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGEN 225
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 26/203 (12%)
Query: 17 FSAAVNSETRE--EVAIKKIGNAFDNIIDARRT-LREIKLLRHMEHENVIAIKDIIRPPK 73
F A+ RE EV + K FD + +RT L+E+K++R +EH NV+ ++ K
Sbjct: 23 FGQAIKVTHRETGEVMVMKELIRFDE--ETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK 80
Query: 74 KDTFNDVYIVYELMDTDLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
+ F YI L II+S D Q F + G+ Y+HS +++HRDL
Sbjct: 81 RLNFITEYI----KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNS 136
Query: 133 SNLLLNASCDLKIGDFGLA-------------RTTSETDFMTEYVVTR--WYRAPELLLN 177
N L+ + ++ + DFGLA R+ + D Y V ++ APE ++N
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE-MIN 195
Query: 178 CTEYTAAIDIWSVGCILGEIMTR 200
Y +D++S G +L EI+ R
Sbjct: 196 GRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 101/185 (54%), Gaps = 12/185 (6%)
Query: 25 TREEVAIKKI-GNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIV 83
T EVAIK I A +R E+K+ ++H +++ + + + N VY+V
Sbjct: 35 TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDSNYVYLV 89
Query: 84 YELM-DTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASC 141
E+ + ++++ +++ + +++ ++F++Q++ G+ Y+HS +LHRDL SNLLL +
Sbjct: 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM 149
Query: 142 DLKIGDFGLARTTSETDFMTEYVV--TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
++KI DFGLA T + Y + T Y +PE+ + + D+WS+GC+ ++
Sbjct: 150 NIKIADFGLA-TQLKMPHEKHYTLCGTPNYISPEIATR-SAHGLESDVWSLGCMFYTLLI 207
Query: 200 REPLF 204
P F
Sbjct: 208 GRPPF 212
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAF--DNIIDARRTLREIKLLRHMEHENVI 63
+G Y + F + T + A+K + A N D T E +L ++H ++
Sbjct: 27 KGGYGKV--FQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 64 AIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 122
D+I + T +Y++ E L +L + + +D ++L ++ L ++H
Sbjct: 85 ---DLIYAFQ--TGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ 139
Query: 123 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEY 181
+++RDLKP N++LN +K+ DFGL + + +T + T Y APE+L+ + +
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMR-SGH 198
Query: 182 TAAIDIWSVGCILGEIMTREPLFPGKD 208
A+D WS+G ++ +++T P F G++
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGEN 225
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 44/291 (15%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
GE D F A N ET A K I + + + EI +L +H N++ +
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKLL 100
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDL--HQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 124
D N+++I+ E ++ ++ LT+ Q Q L L Y+H
Sbjct: 101 DAFYYE-----NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTE--- 180
++HRDLK N+L D+K+ DFG+ A+ T ++ T ++ APE+++ T
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 181 -YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 239
Y D+WS+G L E+ EP H+L N R
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPH------HEL---------------------NPMRV 248
Query: 240 VRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
+ ++ + A P++ SS D L+K L + + R T + L+HP++
Sbjct: 249 LLKIAKSEPPTLAQ--PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ 107
RE + + H ++A+ D + YIV E +D L I+ ++ +T
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEYV 164
+ + L + H ++HRD+KP+N+L++A+ +K+ DFG+AR +++ T V
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAV 179
Query: 165 V-TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYV 210
+ T Y +PE A D++S+GC+L E++T EP F G V
Sbjct: 180 IGTAQYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 44/291 (15%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
GE D F A N ET A K I + + + EI +L +H N++ +
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKLL 100
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDL--HQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 124
D N+++I+ E ++ ++ LT+ Q Q L L Y+H
Sbjct: 101 DAFYYE-----NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTE--- 180
++HRDLK N+L D+K+ DFG+ A+ T ++ T ++ APE+++ T
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 181 -YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 239
Y D+WS+G L E+ EP H+L N R
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPH------HEL---------------------NPMRV 248
Query: 240 VRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
+ ++ + A P++ SS D L+K L + + R T + L+HP++
Sbjct: 249 LLKIAKSEPPTLAQ--PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 44/291 (15%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
GE D F A N ET A K I + + + EI +L +H N++ +
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKLL 100
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDL--HQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 124
D N+++I+ E ++ ++ LT+ Q Q L L Y+H
Sbjct: 101 DAFYYE-----NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTE--- 180
++HRDLK N+L D+K+ DFG+ A+ T ++ T ++ APE+++ T
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 181 -YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 239
Y D+WS+G L E+ EP H+L N R
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPH------HEL---------------------NPMRV 248
Query: 240 VRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
+ ++ + A P++ SS D L+K L + + R T + L+HP++
Sbjct: 249 LLKIAKSEPPTLAQ--PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ 107
RE + + H ++A+ D + YIV E +D L I+ ++ +T
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEYV 164
+ + L + H ++HRD+KP+N++++A+ +K+ DFG+AR +++ T V
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 165 V-TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYV 210
+ T Y +PE A D++S+GC+L E++T EP F G V
Sbjct: 180 IGTAQYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ 107
RE + + H ++A+ D + YIV E +D L I+ ++ +T
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEYV 164
+ + L + H ++HRD+KP+N++++A+ +K+ DFG+AR +++ T V
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 165 V-TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYV 210
+ T Y +PE A D++S+GC+L E++T EP F G V
Sbjct: 180 IGTAQYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ A N T+ V K G+ + L E +++ ++H+ ++ + ++
Sbjct: 31 VWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVV------ 79
Query: 76 TFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQY--FLYQLLRGLKYVHSASVLHRDLKP 132
T +YI+ E M L ++SD+ + F Q+ G+ ++ + +HRDL+
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 139
Query: 133 SNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAAIDIWS 189
+N+L++AS KI DFGLAR + ++ +W APE +N +T D+WS
Sbjct: 140 ANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPE-AINFGSFTIKSDVWS 197
Query: 190 VGCILGEIMT--REPLFPG 206
G +L EI+T R P +PG
Sbjct: 198 FGILLMEIVTYGRIP-YPG 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 81 YIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
YIV E +D L I+ ++ +T + + L + H ++HRD+KP+N++++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 140 SCDLKIGDFGLARTTSETD---FMTEYVV-TRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
+ +K+ DFG+AR +++ T V+ T Y +PE A D++S+GC+L
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLY 210
Query: 196 EIMTREPLFPGKDYV 210
E++T EP F G V
Sbjct: 211 EVLTGEPPFTGDSPV 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ 107
RE + + H ++A+ D + YIV E +D L I+ ++ +T
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEYV 164
+ + L + H ++HRD+KP+N++++A+ +K+ DFG+AR +++ T V
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 165 V-TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPG 206
+ T Y +PE A D++S+GC+L E++T EP F G
Sbjct: 180 IGTAQYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ A N T+ V K G+ + L E +++ ++H+ ++ + ++
Sbjct: 204 VWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVV------ 252
Query: 76 TFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQY--FLYQLLRGLKYVHSASVLHRDLKP 132
T +YI+ E M L ++SD+ + F Q+ G+ ++ + +HRDL+
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 312
Query: 133 SNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAAIDIWS 189
+N+L++AS KI DFGLAR + ++ +W APE +N +T D+WS
Sbjct: 313 ANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPE-AINFGSFTIKSDVWS 370
Query: 190 VGCILGEIMT--REPLFPG 206
G +L EI+T R P +PG
Sbjct: 371 FGILLMEIVTYGRIP-YPG 388
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 81 YIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
YIV E +D L I+ ++ +T + + L + H ++HRD+KP+N++++A
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 140 SCDLKIGDFGLARTTSETD---FMTEYVV-TRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
+ +K+ DFG+AR +++ T V+ T Y +PE A D++S+GC+L
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLY 227
Query: 196 EIMTREPLFPGKDYV 210
E++T EP F G V
Sbjct: 228 EVLTGEPPFTGDSPV 242
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 61/297 (20%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 83 NKRTQEKFALKXLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 128
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + ++Y+HS ++ HRD+K
Sbjct: 129 AGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVK 188
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ + +T T +Y APE +L +Y + D W
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDXW 247
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I ++ P F H L + SP + R R
Sbjct: 248 SLGVIXYILLCGYPPFYSN---HGLAI------SPGXKT-----------------RIRX 281
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R T+ E HP++ + P+
Sbjct: 282 GQY--EFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPL 336
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E M D+ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +K+ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E M D+ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +K+ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Query: 49 REIKLLRHMEHENVIAIKDI-IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQ 107
+E KL ++H N+IA++ + ++ P ++ +V E + S +++ D
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEP------NLCLVMEFARGGPLNRVLSGKRIPPDILV 108
Query: 108 YFLYQLLRGLKYVHSASV---LHRDLKPSNLLLNASCD--------LKIGDFGLARTTSE 156
+ Q+ RG+ Y+H ++ +HRDLK SN+L+ + LKI DFGLAR
Sbjct: 109 NWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR 168
Query: 157 TDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKD 208
T M+ W APE ++ + ++ D+WS G +L E++T E F G D
Sbjct: 169 TTKMSAAGAYAWM-APE-VIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 78 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 135
++ I E MD L Q+++ +++ ++ +LRGL Y+ ++HRD+KPSN+
Sbjct: 87 GEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNI 146
Query: 136 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
L+N+ ++K+ DFG++ ++ +V TR Y APE L T Y+ DIWS+G L
Sbjct: 147 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMAPE-RLQGTHYSVQSDIWSMGLSLV 204
Query: 196 EI-MTREPLFP 205
E+ + R P+ P
Sbjct: 205 ELAVGRYPIPP 215
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM-TEYVVTR 167
L ++L+GL Y+HS +HRD+K +N+LL+ D+K+ DFG+A ++T +V T
Sbjct: 125 MLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTP 184
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLI 216
++ APE ++ + Y + DIWS+G E+ EP P D +H +R++
Sbjct: 185 FWMAPE-VIQQSAYDSKADIWSLGITAIELAKGEP--PNSD-MHPMRVL 229
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 39/244 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ 107
REI++ H+ H N++ + + K+ +Y++ E +L++ ++ + +
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRSA 118
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR 167
F+ +L L Y H V+HRD+KP NLL+ +LKI DFG + + + T
Sbjct: 119 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTL 177
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDAS 227
Y PE++ T + +D+W G + E + P F + R I +
Sbjct: 178 DYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-------NVD 229
Query: 228 LGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 287
L F P S G+ DL+ K+L + P +R+ ++ + HP
Sbjct: 230 LKFP------------------------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 265
Query: 288 YLQS 291
++++
Sbjct: 266 WVKA 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 39/244 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ 107
REI++ H+ H N++ + + K+ +Y++ E +L++ ++ + +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR 167
F+ +L L Y H V+HRD+KP NLL+ +LKI DFG + + + T
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTL 176
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDAS 227
Y PE++ T + +D+W G + E + P F + R I +
Sbjct: 177 DYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-------NVD 228
Query: 228 LGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 287
L F P S G+ DL+ K+L + P +R+ ++ + HP
Sbjct: 229 LKFP------------------------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
Query: 288 YLQS 291
++++
Sbjct: 265 WVKA 268
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 39/244 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ 107
REI++ H+ H N++ + + K+ +Y++ E +L++ ++ + +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR 167
F+ +L L Y H V+HRD+KP NLL+ +LKI DFG + + + T
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTL 176
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDAS 227
Y PE++ T + +D+W G + E + P F + R I +
Sbjct: 177 DYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-------NVD 228
Query: 228 LGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 287
L F P S G+ DL+ K+L + P +R+ ++ + HP
Sbjct: 229 LKFP------------------------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
Query: 288 YLQS 291
++++
Sbjct: 265 WVKA 268
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 65/288 (22%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPPKKDTFNDVYIVYELM 87
VA+K++ F +I L EIKLL + H NVI D F +YI EL
Sbjct: 60 VAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRY---YCSETTDRF--LYIALELC 109
Query: 88 DTDLHQIIRSDQQLTDDHCQY--------FLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+ +L ++ S + ++D++ + L Q+ G+ ++HS ++HRDLKP N+L++
Sbjct: 110 NLNLQDLVES-KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 168
Query: 140 SCDLK-------------IGDFGLART--TSETDF---MTEYVVTRWYRAPELLLNCTE- 180
S I DFGL + + + F + T +RAPELL T+
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKR 228
Query: 181 -YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 239
T +IDI+S+GC+ I+++ G Y + +I + SL ++ + R
Sbjct: 229 RLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF------SLDEMKCLHDRSL 282
Query: 240 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 287
+ + A DL+ +M+ DP KR T + LRHP
Sbjct: 283 IAE-------------------ATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 39/273 (14%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A++ T +EVAI+++ + EI ++R ++ N++ D ++
Sbjct: 39 AMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDE 91
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+++V E + + ++ + + + L+ L+++HS V+HRD+K N+LL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 140 SCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
+K+ DFG A+ T E +E V T ++ APE++ Y +DIWS+G + E++
Sbjct: 152 DGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMI 210
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK 258
EP + ++ + L LI G+P+ + P K
Sbjct: 211 EGEPPYLNENPLRALYLIA-TNGTPE----------------------------LQNPEK 241
Query: 259 SSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
S D L + L D KR + +E L+H +L+
Sbjct: 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 51/304 (16%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
+++ A E + ++++ +A + D+ +KLL H H+ +
Sbjct: 57 VYTEAAEDEIK---LLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVH--------- 104
Query: 76 TFNDVYIVYELMDTDLHQIIRSDQQ--LTDDHCQYFLYQLLRGLKYVHS-ASVLHRDLKP 132
V +V+E++ +L +I+ + + + + QLL GL Y+H ++H D+KP
Sbjct: 105 ----VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKP 160
Query: 133 SNLLLNAS------CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAID 186
N+L+ +KI D G A E T + TR YR+PE+LL + D
Sbjct: 161 ENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAP-WGCGAD 217
Query: 187 IWSVGCILGEIMTREPLFP---GKDYVHQLRLITELIGSPDDASLGFLRSD-------NA 236
IWS C++ E++T + LF G Y I ++I + LR+ N+
Sbjct: 218 IWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNS 277
Query: 237 RRYVRQLPRCR----------KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 286
R +R + + + K +F+ +++ D L ML DP KR + H
Sbjct: 278 RGLLRNISKLKFWPLEDVLTEKYKFSK---DEAKEISDFLSPMLQLDPRKRADAGGLVNH 334
Query: 287 PYLQ 290
P+L+
Sbjct: 335 PWLK 338
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 51/304 (16%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
+++ A E + ++++ +A + D+ +KLL H H+ +
Sbjct: 57 VYTEAAEDEIK---LLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVH--------- 104
Query: 76 TFNDVYIVYELMDTDLHQIIRSDQQ--LTDDHCQYFLYQLLRGLKYVHS-ASVLHRDLKP 132
V +V+E++ +L +I+ + + + + QLL GL Y+H ++H D+KP
Sbjct: 105 ----VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKP 160
Query: 133 SNLLLNAS------CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAID 186
N+L+ +KI D G A E T + TR YR+PE+LL + D
Sbjct: 161 ENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAP-WGCGAD 217
Query: 187 IWSVGCILGEIMTREPLFP---GKDYVHQLRLITELIGSPDDASLGFLRSD-------NA 236
IWS C++ E++T + LF G Y I ++I + LR+ N+
Sbjct: 218 IWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNS 277
Query: 237 RRYVRQLPRCR----------KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 286
R +R + + + K +F+ +++ D L ML DP KR + H
Sbjct: 278 RGLLRNISKLKFWPLEDVLTEKYKFSK---DEAKEISDFLSPMLQLDPRKRADAGGLVNH 334
Query: 287 PYLQ 290
P+L+
Sbjct: 335 PWLK 338
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 65/288 (22%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPPKKDTFNDVYIVYELM 87
VA+K++ F +I L EIKLL + H NVI D F +YI EL
Sbjct: 60 VAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRY---YCSETTDRF--LYIALELC 109
Query: 88 DTDLHQIIRSDQQLTDDHCQY--------FLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+ +L ++ S + ++D++ + L Q+ G+ ++HS ++HRDLKP N+L++
Sbjct: 110 NLNLQDLVES-KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 168
Query: 140 SCDLK-------------IGDFGLART--TSETDF---MTEYVVTRWYRAPELLLNCTE- 180
S I DFGL + + + F + T +RAPELL T+
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKR 228
Query: 181 -YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 239
T +IDI+S+GC+ I+++ G Y + +I + SL ++ + R
Sbjct: 229 RLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF------SLDEMKCLHDRSL 282
Query: 240 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 287
+ + A DL+ +M+ DP KR T + LRHP
Sbjct: 283 IAE-------------------ATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 120/296 (40%), Gaps = 54/296 (18%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIA------IKDII 69
+ AA + +E+VAIK+I N L+EI+ + H N+++ +KD
Sbjct: 30 VVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD-- 86
Query: 70 RPPKKDTFNDVYIVYELM------DTDLHQIIRSDQQ---LTDDHCQYFLYQLLRGLKYV 120
++++V +L+ D H + + + + L + L ++L GL+Y+
Sbjct: 87 ---------ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137
Query: 121 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE------YVVTRWYRAPEL 174
H +HRD+K N+LL ++I DFG++ + +T +V T + APE+
Sbjct: 138 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 197
Query: 175 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 234
+ Y DIWS G E+ T P Y L+ L P G +
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATGAA--PYHKYPPMKVLMLTLQNDPPSLETGVQDKE 255
Query: 235 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
++Y + + ++ L DP KR T E LRH + Q
Sbjct: 256 MLKKYGKSFRK-------------------MISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD 88
VAIK + + R L E ++ EH N+I ++ ++ V I+ E M+
Sbjct: 47 VAIKTLKGGYTER-QRREFLSEASIMGQFEHPNIIRLEGVV-----TNSMPVMILTEFME 100
Query: 89 TD-LHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
L +R +D Q T L + G++Y+ S +HRDL N+L+N++ K+
Sbjct: 101 NGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVS 160
Query: 147 DFGLAR-------TTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
DFGL+R +ET + + RW APE + ++T+A D WS G ++ E+M+
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIRWT-APEAIA-FRKFTSASDAWSYGIVMWEVMS 218
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 60/310 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPPKKDTFN 78
+N T +E A+K I +I R RE+++L + H NV+ + + ++D F
Sbjct: 32 CINLITSQEYAVKIIEKQPGHI--RSRVFREVEMLYQCQGHRNVLELIEFFE--EEDRF- 86
Query: 79 DVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
Y+V+E M + I + + + + L ++H+ + HRDLKP N+L
Sbjct: 87 --YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 138 ---NASCDLKIGDFGLARTT---------SETDFMTEYVVTRWYRAPELLLNCTE----Y 181
N +KI DFGL S + +T + Y APE++ +E Y
Sbjct: 145 EHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTP-CGSAEYMAPEVVEAFSEEASIY 203
Query: 182 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 241
D+WS+G IL +++ P F G+ GS G+ R +
Sbjct: 204 DKRCDLWSLGVILYILLSGYPPFVGR------------CGS----DCGWDRGEAC----- 242
Query: 242 QLPRCRKQQFAT------RFPNK-----SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
P C+ F + FP+K S A DL+ K+LV D +R++ + L+HP++Q
Sbjct: 243 --PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
Query: 291 SLHDLNDEPV 300
N P
Sbjct: 301 GCAPENTLPT 310
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 16/157 (10%)
Query: 54 LRHMEHEN-------VIAIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLT 102
L+ +EH N ++ IIR TF D ++ +MD +L ++R Q+
Sbjct: 47 LKQVEHTNDERLMLSIVTHPFIIR--MWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP 104
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 162
+ +++ ++ L+Y+HS +++RDLKP N+LL+ + +KI DFG A+ + +
Sbjct: 105 NPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL- 163
Query: 163 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T Y APE +++ Y +ID WS G ++ E++
Sbjct: 164 -CGTPDYIAPE-VVSTKPYNKSIDWWSFGILIYEMLA 198
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 120/296 (40%), Gaps = 54/296 (18%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIA------IKDII 69
+ AA + +E+VAIK+I N L+EI+ + H N+++ +KD
Sbjct: 25 VVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD-- 81
Query: 70 RPPKKDTFNDVYIVYELM------DTDLHQIIRSDQQ---LTDDHCQYFLYQLLRGLKYV 120
++++V +L+ D H + + + + L + L ++L GL+Y+
Sbjct: 82 ---------ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 132
Query: 121 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE------YVVTRWYRAPEL 174
H +HRD+K N+LL ++I DFG++ + +T +V T + APE+
Sbjct: 133 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 192
Query: 175 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 234
+ Y DIWS G E+ T P Y L+ L P G +
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATGAA--PYHKYPPMKVLMLTLQNDPPSLETGVQDKE 250
Query: 235 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
++Y + + ++ L DP KR T E LRH + Q
Sbjct: 251 MLKKYGKSFRK-------------------MISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 45/220 (20%)
Query: 96 RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLAR 152
R DQ T+ + + ++++HS ++ HRD+KP NLL + LK+ DFG A+
Sbjct: 101 RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 160
Query: 153 TTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ 212
T++ T T +Y APE +L +Y + D+WS+G I+ ++ P F
Sbjct: 161 ETTQNALQTP-CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPF-------- 210
Query: 213 LRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK-----SSGAVDLLE 267
++ G S +R R R Q+ FPN S A L+
Sbjct: 211 ------------YSNTGQAISPGMKR------RIRLGQYG--FPNPEWSEVSEDAKQLIR 250
Query: 268 KMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPR-PFH 306
+L DP +R+T+ + + HP+ +N V P+ P H
Sbjct: 251 LLLKTDPTERLTITQFMNHPW------INQSMVVPQTPLH 284
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 45/220 (20%)
Query: 96 RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLAR 152
R DQ T+ + + ++++HS ++ HRD+KP NLL + LK+ DFG A+
Sbjct: 120 RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179
Query: 153 TTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ 212
T++ T T +Y APE +L +Y + D+WS+G I+ ++ P F
Sbjct: 180 ETTQNALQTP-CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPF-------- 229
Query: 213 LRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK-----SSGAVDLLE 267
++ G S +R R R Q+ FPN S A L+
Sbjct: 230 ------------YSNTGQAISPGMKR------RIRLGQYG--FPNPEWSEVSEDAKQLIR 269
Query: 268 KMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPR-PFH 306
+L DP +R+T+ + + HP+ +N V P+ P H
Sbjct: 270 LLLKTDPTERLTITQFMNHPW------INQSMVVPQTPLH 303
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ A N T+ V K G+ + L E +++ ++H+ ++ + ++
Sbjct: 198 VWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVV------ 246
Query: 76 TFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQY--FLYQLLRGLKYVHSASVLHRDLKP 132
T +YI+ E M L ++SD+ + F Q+ G+ ++ + +HRDL+
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 306
Query: 133 SNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
+N+L++AS KI DFGLAR ++ +W APE +N +T D+WS G
Sbjct: 307 ANILVSASLVCKIADFGLARVGAK-------FPIKW-TAPE-AINFGSFTIKSDVWSFGI 357
Query: 193 ILGEIMT--REPLFPG 206
+L EI+T R P +PG
Sbjct: 358 LLMEIVTYGRIP-YPG 372
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 31/216 (14%)
Query: 78 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 135
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 96 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 155
Query: 136 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 156 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 213
Query: 196 EI-MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
E+ + R P+ G + L+ ++ P P+ F+
Sbjct: 214 EMAVGRYPIGSGSGSMAIFELLDYIVNEPP-------------------PKLPSGVFSLE 254
Query: 255 FPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
F D + K L+ +P +R +++ + H +++
Sbjct: 255 FQ-------DFVNKCLIKNPAERADLKQLMVHAFIK 283
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 78 NDVYIVYELMDTDL----HQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKP 132
DV+I EL DT L Q+I Q + +D +++ L+++HS SV+HRD+KP
Sbjct: 106 GDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKP 165
Query: 133 SNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL---LNCTEYTAAIDIWS 189
SN+L+NA +K DFG++ + + Y APE + LN Y+ DIWS
Sbjct: 166 SNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWS 225
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
+G E+ FP + + + +++ P P+
Sbjct: 226 LGITXIELAILR--FPYDSWGTPFQQLKQVVEEPS-------------------PQLPAD 264
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 294
+F+ F VD + L + +R T E +HP+ +LH+
Sbjct: 265 KFSAEF-------VDFTSQCLKKNSKERPTYPELXQHPFF-TLHE 301
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD 88
VAIK + + R L E ++ EH N+I ++ ++ V I+ E M+
Sbjct: 45 VAIKTLKGGYTER-QRREFLSEASIMGQFEHPNIIRLEGVV-----TNSMPVMILTEFME 98
Query: 89 TD-LHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
L +R +D Q T L + G++Y+ S +HRDL N+L+N++ K+
Sbjct: 99 NGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVS 158
Query: 147 DFGLARTTSE-------TDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
DFGL+R E T + + RW APE + ++T+A D WS G ++ E+M+
Sbjct: 159 DFGLSRFLEENSSDPTYTSSLGGKIPIRW-TAPEAIA-FRKFTSASDAWSYGIVMWEVMS 216
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 69/292 (23%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPPKKDTFNDVYIVYELM 87
VA+K++ F +I L EIKLL + H NVI D F +YI EL
Sbjct: 42 VAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRY---YCSETTDRF--LYIALELC 91
Query: 88 DTDLHQIIRSDQQLTDDHCQY--------FLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+ +L ++ S + ++D++ + L Q+ G+ ++HS ++HRDLKP N+L++
Sbjct: 92 NLNLQDLVES-KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150
Query: 140 SCDLK-------------IGDFGLART--TSETDFMTEY---VVTRWYRAPELLLNCTE- 180
S I DFGL + + ++ F T T +RAPELL
Sbjct: 151 SSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNL 210
Query: 181 -----YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 235
T +IDI+S+GC+ I+++ G Y + +I + SL ++ +
Sbjct: 211 QTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF------SLDEMKCLH 264
Query: 236 ARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 287
R + + A DL+ +M+ DP KR T + LRHP
Sbjct: 265 DRSLIAE-------------------ATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD 88
VAIK + + + R L E ++ +H NVI ++ ++ K T V I+ E M+
Sbjct: 64 VAIKTLKSGYTEK-QRRDFLSEASIMGQFDHPNVIHLEGVV---TKST--PVMIITEFME 117
Query: 89 T-DLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
L +R +D Q T L + G+KY+ + +HRDL N+L+N++ K+
Sbjct: 118 NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVS 177
Query: 147 DFGLAR----TTSE---TDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
DFGL+R TS+ T + + RW APE + ++T+A D+WS G ++ E+M+
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPE-AIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 121/278 (43%), Gaps = 50/278 (17%)
Query: 28 EVAIKKIGNAFDNIIDARRTLREIKLLRHM-EHENVIAIKDIIRPPKKDTFNDVYIVYEL 86
+VA+K+I + D RE++LLR EH NVI K F YI EL
Sbjct: 50 DVAVKRILPECFSFAD-----REVQLLRESDEHPNVIRY---FCTEKDRQFQ--YIAIEL 99
Query: 87 MDTDLHQII-RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL---NASCD 142
L + + + D L Q GL ++HS +++HRDLKP N+L+ NA
Sbjct: 100 CAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGK 159
Query: 143 LK--IGDFGLAR--TTSETDFMTEYVV--TRWYRAPELLL-NCTEY-TAAIDIWSVGCIL 194
+K I DFGL + F V T + APE+L +C E T +DI+S GC+
Sbjct: 160 IKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF 219
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 254
+++ GK Q + L+G+ SL L + +
Sbjct: 220 YYVISEGSHPFGKSLQRQANI---LLGA---CSLDCLHPEKHEDVI-------------- 259
Query: 255 FPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 292
A +L+EKM+ DP KR + + L+HP+ SL
Sbjct: 260 -------ARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G + + + + N T E VA+K + + + REI++LR + HE+++ K
Sbjct: 20 GHFGKVSLYCYDP-TNDGTGEMVAVKALKEGCGPQLRSGWQ-REIEILRTLYHEHIVKYK 77
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHC----QYFLY--QLLRGLKYV 120
+ + V +V E + + S + HC Q L+ Q+ G+ Y+
Sbjct: 78 GCCEDQGEKS---VQLVMEYVP------LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYL 128
Query: 121 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRAP 172
H+ +HR L N+LL+ +KIGDFGLA+ E EY R WY AP
Sbjct: 129 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFWY-AP 184
Query: 173 ELLLNCTEYTAAIDIWSVGCILGEIMT 199
E L C Y A+ D+WS G L E++T
Sbjct: 185 ECLKECKFYYAS-DVWSFGVTLYELLT 210
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 47/292 (16%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
GE D F A N ET A K I + + + EI +L +H N++ +
Sbjct: 18 GELGD--FGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKLL 73
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDL--HQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 124
D N+++I+ E ++ ++ LT+ Q Q L L Y+H
Sbjct: 74 DAFY-----YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 128
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEYVVTRWYRAPELLLNCTE-- 180
++HRDLK N+L D+K+ DFG++ + T ++ T ++ APE+++ T
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 181 --YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARR 238
Y D+WS+G L E+ EP H+L N R
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEPPH------HEL---------------------NPMR 221
Query: 239 YVRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 289
+ ++ + A P++ SS D L+K L + + R T + L+HP++
Sbjct: 222 VLLKIAKSEPPTLAQ--PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A++ T +EVAI+++ + EI ++R ++ N++ D ++
Sbjct: 39 AMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDE 91
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+++V E + + ++ + + + L+ L+++HS V+HRD+K N+LL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 140 SCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
+K+ DFG A+ T E + V T ++ APE++ Y +DIWS+G + E++
Sbjct: 152 DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMI 210
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK 258
EP + ++ + L LI G+P+ + P K
Sbjct: 211 EGEPPYLNENPLRALYLIA-TNGTPE----------------------------LQNPEK 241
Query: 259 SSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
S D L + L D KR + +E L+H +L+
Sbjct: 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G + + + + N T E VA+K + + + REI++LR + HE+++ K
Sbjct: 19 GHFGKVSLYCYDP-TNDGTGEMVAVKALKEGCGPQLRSGWQ-REIEILRTLYHEHIVKYK 76
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHC----QYFLY--QLLRGLKYV 120
+ + V +V E + + S + HC Q L+ Q+ G+ Y+
Sbjct: 77 GCCEDQGEKS---VQLVMEYVP------LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYL 127
Query: 121 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRAP 172
H+ +HR L N+LL+ +KIGDFGLA+ E EY R WY AP
Sbjct: 128 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFWY-AP 183
Query: 173 ELLLNCTEYTAAIDIWSVGCILGEIMT 199
E L C Y A+ D+WS G L E++T
Sbjct: 184 ECLKECKFYYAS-DVWSFGVTLYELLT 209
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
KD V + D H + ++ ++ GL+ +H +++RDLKP
Sbjct: 256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPE 315
Query: 134 NLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCI 193
N+LL+ ++I D GLA E + V T Y APE++ N YT + D W++GC+
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCL 374
Query: 194 LGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFAT 253
L E++ + SP ++ + R V+++P ++++
Sbjct: 375 LYEMIAGQ--------------------SPFQQRKKKIKREEVERLVKEVP----EEYSE 410
Query: 254 RFPNKSSGAVDLLEKMLVFDPNKRI-----TVEEALRHPYLQSLH 293
RF S A L ++L DP +R+ + E HP + L+
Sbjct: 411 RF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGLAR E +
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAY 205
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 206 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
KD V + D H + ++ ++ GL+ +H +++RDLKP
Sbjct: 256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPE 315
Query: 134 NLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCI 193
N+LL+ ++I D GLA E + V T Y APE++ N YT + D W++GC+
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCL 374
Query: 194 LGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFAT 253
L E++ + SP ++ + R V+++P ++++
Sbjct: 375 LYEMIAGQ--------------------SPFQQRKKKIKREEVERLVKEVP----EEYSE 410
Query: 254 RFPNKSSGAVDLLEKMLVFDPNKRI-----TVEEALRHPYLQSLH 293
RF S A L ++L DP +R+ + E HP + L+
Sbjct: 411 RF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A++ T +EVAI+++ + EI ++R ++ N++ D ++
Sbjct: 39 AMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDE 91
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+++V E + + ++ + + + L+ L+++HS V+HRD+K N+LL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 140 SCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
+K+ DFG A+ T E + V T ++ APE++ Y +DIWS+G + E++
Sbjct: 152 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMI 210
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK 258
EP + ++ + L LI G+P+ + P K
Sbjct: 211 EGEPPYLNENPLRALYLIAT-NGTPE----------------------------LQNPEK 241
Query: 259 SSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
S D L + L D KR + +E L+H +L+
Sbjct: 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 18/183 (9%)
Query: 27 EEVAIKKIGNAFDNIIDARR-TLREIKLLRHMEHENVIAIKD-IIRPPKKDTFNDVYIVY 84
E VAIKK+ + + + ++E++ L+ + H N I + +R + ++V
Sbjct: 80 EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE------HTAWLVM 133
Query: 85 EL---MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASC 141
E +DL ++ + + L + + L+GL Y+HS +++HRD+K N+LL+
Sbjct: 134 EYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG 191
Query: 142 DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE--YTAAIDIWSVGCILGEIMT 199
+K+GDFG A + + +V T ++ APE++L E Y +D+WS+G E+
Sbjct: 192 LVKLGDFGSASIMAPAN---XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 248
Query: 200 REP 202
R+P
Sbjct: 249 RKP 251
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E +
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 206 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 18/183 (9%)
Query: 27 EEVAIKKIGNAFDNIIDARR-TLREIKLLRHMEHENVIAIKD-IIRPPKKDTFNDVYIVY 84
E VAIKK+ + + + ++E++ L+ + H N I + +R + ++V
Sbjct: 41 EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE------HTAWLVM 94
Query: 85 EL---MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASC 141
E +DL ++ + + L + + L+GL Y+HS +++HRD+K N+LL+
Sbjct: 95 EYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG 152
Query: 142 DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE--YTAAIDIWSVGCILGEIMT 199
+K+GDFG A + + +V T ++ APE++L E Y +D+WS+G E+
Sbjct: 153 LVKLGDFGSASIMAPAN---XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209
Query: 200 REP 202
R+P
Sbjct: 210 RKP 212
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
T+ E ++L++ H + A+K + T + + V E + +L + ++ T++
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 106 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEYV 164
+++ +++ L+Y+HS V++RD+K NL+L+ +KI DFGL + S+ M +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL--- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 167 GTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
Query: 220 -IGSPDDASL--GFLRSDNARR 238
SP+ SL G L+ D +R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +K+ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 31/197 (15%)
Query: 29 VAIKKIGNAFDNIIDARRTL-REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM 87
VA+K + +A DN AR+ RE +LL +++HE+++ + + + +V+E M
Sbjct: 46 VAVKTLKDASDN---ARKDFHREAELLTNLQHEHIVKFYGVCVEG-----DPLIMVFEYM 97
Query: 88 D-TDLHQIIRSD-------------QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
DL++ +R+ +LT + Q+ G+ Y+ S +HRDL
Sbjct: 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATR 157
Query: 134 NLLLNASCDLKIGDFGLARTTSETDFMT----EYVVTRWYRAPELLLNCTEYTAAIDIWS 189
N L+ + +KIGDFG++R TD+ + RW PE ++ ++T D+WS
Sbjct: 158 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM-PPESIMY-RKFTTESDVWS 215
Query: 190 VGCILGEIMT--REPLF 204
+G +L EI T ++P +
Sbjct: 216 LGVVLWEIFTYGKQPWY 232
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
T+ E ++L++ H + A+K + T + + V E + +L + ++ T++
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 106 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEYV 164
+++ +++ L+Y+HS V++RD+K NL+L+ +KI DFGL + S+ M +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL--- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 167 GTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
Query: 220 -IGSPDDASL--GFLRSDNARR 238
SP+ SL G L+ D +R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
T+ E ++L++ H + A+K + T + + V E + +L + ++ T++
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 106 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEYV 164
+++ +++ L+Y+HS V++RD+K NL+L+ +KI DFGL + S+ M +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL--- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 167 GTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
Query: 220 -IGSPDDASL--GFLRSDNARR 238
SP+ SL G L+ D +R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 19/187 (10%)
Query: 29 VAIKKIGNAFD-NIIDARRTLREIKLLRHMEHE-NVIAIKDIIRPPK--------KDTFN 78
V K+ GN + I+D ++ ++ L+ +EH N I+ + P KD N
Sbjct: 61 VKHKETGNHYAMKILDKQKVVK----LKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSN 116
Query: 79 DVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
+Y+V E ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL+
Sbjct: 117 -LYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 138 NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+ +K+ DFG A+ + T Y APE++L Y A+D W++G ++ E+
Sbjct: 176 DQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEM 232
Query: 198 MTREPLF 204
P F
Sbjct: 233 AAGYPPF 239
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A++ T +EVAI+++ + EI ++R ++ N++ D ++
Sbjct: 40 AMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDE 92
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+++V E + + ++ + + + L+ L+++HS V+HRD+K N+LL
Sbjct: 93 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 152
Query: 140 SCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
+K+ DFG A+ T E + V T ++ APE++ Y +DIWS+G + E++
Sbjct: 153 DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMI 211
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK 258
EP + ++ + L LI G+P+ + P K
Sbjct: 212 EGEPPYLNENPLRALYLIA-TNGTPE----------------------------LQNPEK 242
Query: 259 SSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
S D L + L D KR + +E ++H +L+
Sbjct: 243 LSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
T+ E ++L++ H + A+K + T + + V E + +L + ++ T++
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 106 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEYV 164
+++ +++ L+Y+HS V++RD+K NL+L+ +KI DFGL + S+ M +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL--- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 167 GTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
Query: 220 -IGSPDDASL--GFLRSDNARR 238
SP+ SL G L+ D +R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
T+ E ++L++ H + A+K + T + + V E + +L + ++ T++
Sbjct: 57 TVTESRVLQNTRHPFLTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEER 111
Query: 106 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEYV 164
+++ +++ L+Y+HS V++RD+K NL+L+ +KI DFGL + S+ M +
Sbjct: 112 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 171
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL--- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 172 GTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 230
Query: 220 -IGSPDDASL--GFLRSDNARR 238
SP+ SL G L+ D +R
Sbjct: 231 RTLSPEAKSLLAGLLKKDPKQR 252
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
T+ E ++L++ H + A+K + T + + V E + +L + ++ T++
Sbjct: 55 TVTESRVLQNTRHPFLTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEER 109
Query: 106 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEYV 164
+++ +++ L+Y+HS V++RD+K NL+L+ +KI DFGL + S+ M +
Sbjct: 110 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 169
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL--- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 170 GTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 228
Query: 220 -IGSPDDASL--GFLRSDNARR 238
SP+ SL G L+ D +R
Sbjct: 229 RTLSPEAKSLLAGLLKKDPKQR 250
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
T+ E ++L++ H + A+K + T + + V E + +L + ++ T++
Sbjct: 52 TVTESRVLQNTRHPFLTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 106 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEYV 164
+++ +++ L+Y+HS V++RD+K NL+L+ +KI DFGL + S+ M +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL--- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 167 GTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
Query: 220 -IGSPDDASL--GFLRSDNARR 238
SP+ SL G L+ D +R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E +
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 206 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E +
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 206 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL R E +
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 206 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 131/310 (42%), Gaps = 60/310 (19%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPPKKDTFN 78
+N T +E A+K I +I R RE+++L + H NV+ + + ++D F
Sbjct: 32 CINLITSQEYAVKIIEKQPGHI--RSRVFREVEMLYQCQGHRNVLELIEFFE--EEDRF- 86
Query: 79 DVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLL 137
Y+V+E M + I + + + + L ++H+ + HRDLKP N+L
Sbjct: 87 --YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 138 ---NASCDLKIGDFGLARTT---------SETDFMTEYVVTRWYRAPELLLNCTE----Y 181
N +KI DF L S + +T + Y APE++ +E Y
Sbjct: 145 EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTP-CGSAEYMAPEVVEAFSEEASIY 203
Query: 182 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 241
D+WS+G IL +++ P F G+ GS G+ R +
Sbjct: 204 DKRCDLWSLGVILYILLSGYPPFVGR------------CGS----DCGWDRGEAC----- 242
Query: 242 QLPRCRKQQFAT------RFPNK-----SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
P C+ F + FP+K S A DL+ K+LV D +R++ + L+HP++Q
Sbjct: 243 --PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
Query: 291 SLHDLNDEPV 300
N P
Sbjct: 301 GCAPENTLPT 310
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 92/182 (50%), Gaps = 9/182 (4%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI--AIKDIIRPPKKDTFNDVYIVYEL 86
V K+ GN F I ++ + ++K + H +E I A+ + +F D +Y +
Sbjct: 60 VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMV 119
Query: 87 MD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
M+ ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL++
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
Query: 143 LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREP 202
+++ DFG A+ + T Y APE++L Y A+D W++G ++ E+ P
Sbjct: 180 IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 203 LF 204
F
Sbjct: 237 PF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 92/182 (50%), Gaps = 9/182 (4%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI--AIKDIIRPPKKDTFNDVYIVYEL 86
V K+ GN F I ++ + ++K + H +E I A+ + +F D +Y +
Sbjct: 60 VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMV 119
Query: 87 MD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
M+ ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL++
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
Query: 143 LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREP 202
+++ DFG A+ + T Y APE++L Y A+D W++G ++ E+ P
Sbjct: 180 IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 203 LF 204
F
Sbjct: 237 PF 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFT 116
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E +
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 177 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E +
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 206 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E +
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 206 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
KDT ++I+ E + + L + L ++L+GL Y+HS +HRD+K +
Sbjct: 91 KDT--KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAA 148
Query: 134 NLLLNASCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
N+LL+ ++K+ DFG+A ++T +V T ++ APE ++ + Y + DIWS+G
Sbjct: 149 NVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDSKADIWSLGI 207
Query: 193 ILGEIMTREP 202
E+ EP
Sbjct: 208 TAIELARGEP 217
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 92/182 (50%), Gaps = 9/182 (4%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI--AIKDIIRPPKKDTFNDVYIVYEL 86
V K+ GN F I ++ + ++K + H +E I A+ + +F D +Y +
Sbjct: 60 VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMV 119
Query: 87 MD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
M+ ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL++
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
Query: 143 LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREP 202
+++ DFG A+ + T Y APE++L Y A+D W++G ++ E+ P
Sbjct: 180 IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 203 LF 204
F
Sbjct: 237 PF 238
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEXMENGSLDSFLRKHDAQFT 116
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E +
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 177 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E +
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 206 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFT 133
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E +
Sbjct: 134 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 193
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 194 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 233
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFT 143
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E +
Sbjct: 144 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 203
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 204 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLT 102
R L E ++ +H N+I ++ ++ K V IV E M+ L +R D Q T
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDF 159
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E +
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 160 MTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW +PE + ++T+A D+WS G +L E+M+
Sbjct: 206 TTRGGKIPIRW-TSPEAIA-YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
KDT ++I+ E + + L + L ++L+GL Y+HS +HRD+K +
Sbjct: 76 KDT--KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAA 133
Query: 134 NLLLNASCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
N+LL+ ++K+ DFG+A ++T +V T ++ APE ++ + Y + DIWS+G
Sbjct: 134 NVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDSKADIWSLGI 192
Query: 193 ILGEIMTREP 202
E+ EP
Sbjct: 193 TAIELARGEP 202
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NL+
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +K+ DFGLA+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIKVTDFGLAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 69/292 (23%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPPKKDTFNDVYIVYELM 87
VA+K++ F +I L EIKLL + H NVI D F +YI EL
Sbjct: 42 VAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRY---YCSETTDRF--LYIALELC 91
Query: 88 DTDLHQIIRSDQQLTDDHCQY--------FLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+ +L ++ S + ++D++ + L Q+ G+ ++HS ++HRDLKP N+L++
Sbjct: 92 NLNLQDLVES-KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150
Query: 140 SCDLK-------------IGDFGLART--TSETDF---MTEYVVTRWYRAPELLLNCTE- 180
S I DFGL + + + F + T +RAPELL
Sbjct: 151 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNL 210
Query: 181 -----YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 235
T +IDI+S+GC+ I+++ G Y + +I + SL ++ +
Sbjct: 211 QTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF------SLDEMKCLH 264
Query: 236 ARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 287
R + + A DL+ +M+ DP KR T + LRHP
Sbjct: 265 DRSLIAE-------------------ATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
KDT ++I+ E + + L + L ++L+GL Y+HS +HRD+K +
Sbjct: 76 KDT--KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAA 133
Query: 134 NLLLNASCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
N+LL+ ++K+ DFG+A ++T +V T ++ APE ++ + Y + DIWS+G
Sbjct: 134 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAYDSKADIWSLGI 192
Query: 193 ILGEIMTREP 202
E+ EP
Sbjct: 193 TAIELARGEP 202
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 20/185 (10%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + I+
Sbjct: 38 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIME 93
Query: 85 ELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
L L ++ ++ D H + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 94 YLPYGSLRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 143 LKIGDFGLARTTSETDFMTEYVVTR--------WYRAPELLLNCTEYTAAIDIWSVGCIL 194
+KIGDFGL + + E+ + WY APE L ++++ A D+WS G +L
Sbjct: 153 VKIGDFGLTKVLPQD---KEFFKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVL 207
Query: 195 GEIMT 199
E+ T
Sbjct: 208 YELFT 212
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 74 KDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPS 133
KDT ++I+ E + + L + L ++L+GL Y+HS +HRD+K +
Sbjct: 96 KDT--KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAA 153
Query: 134 NLLLNASCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCTEYTAAIDIWSVGC 192
N+LL+ ++K+ DFG+A ++T +V T ++ APE ++ + Y + DIWS+G
Sbjct: 154 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAYDSKADIWSLGI 212
Query: 193 ILGEIMTREP 202
E+ EP
Sbjct: 213 TAIELARGEP 222
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD-LHQIIR-SDQQLTDDH 105
L E ++ H N+I ++ +I + + I+ E M+ L + +R D + +
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVI-----SKYKPMMIITEYMENGALDKFLREKDGEFSVLQ 148
Query: 106 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV 165
L + G+KY+ + + +HRDL N+L+N++ K+ DFGL+R E D Y
Sbjct: 149 LVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL-EDDPEATYTT 207
Query: 166 T------RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ RW APE ++ ++T+A D+WS G ++ E+MT
Sbjct: 208 SGGKIPIRW-TAPE-AISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 94 IIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL-AR 152
++ D+ LT+ Q Q+L L ++HS ++HRDLK N+L+ D+++ DFG+ A+
Sbjct: 107 MLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166
Query: 153 TTSETDFMTEYVVTRWYRAPELL----LNCTEYTAAIDIWSVGCILGEIMTREP 202
++ T ++ APE++ + T Y DIWS+G L E+ EP
Sbjct: 167 NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 48/296 (16%)
Query: 19 AAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPPKKDTF 77
AV+ + +E A+K I + R RE++ L + ++N++ ++I + DT
Sbjct: 31 GAVSLQNGKEYAVKIIEKQAGH--SRSRVFREVETLYQCQGNKNIL---ELIEFFEDDT- 84
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
Y+V+E L + I+ + + + + L ++H+ + HRDLKP N+L
Sbjct: 85 -RFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENIL 143
Query: 137 LNAS--------CDLKIGDFGLARTTSETDFMTEYVVT----RWYRAPELLL----NCTE 180
+ CD +G G+ S T T + T Y APE++ T
Sbjct: 144 CESPEKVSPVKICDFDLGS-GMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATF 202
Query: 181 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 240
Y D+WS+G +L +++ P F G A G+ R + R
Sbjct: 203 YDKRCDLWSLGVVLYIMLSGYPPFVGH----------------CGADCGWDRGEVCRVCQ 246
Query: 241 RQLPRCRKQQFATRFPNK-----SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
+L Q+ FP+K SS A DL+ K+LV D +R++ + L+HP++Q
Sbjct: 247 NKLFE-SIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 94 IIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL-AR 152
++ D+ LT+ Q Q+L L ++HS ++HRDLK N+L+ D+++ DFG+ A+
Sbjct: 99 MLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK 158
Query: 153 TTSETDFMTEYVVTRWYRAPELL----LNCTEYTAAIDIWSVGCILGEIMTREP 202
++ T ++ APE++ + T Y DIWS+G L E+ EP
Sbjct: 159 NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 212
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 96/183 (52%), Gaps = 16/183 (8%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + ++ ++
Sbjct: 41 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGR---RNLKLIM 95
Query: 85 ELMD-TDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASC 141
E + L + ++ ++ D H + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 96 EFLPYGSLREYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN 154
Query: 142 DLKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILGE 196
+KIGDFGL + + + WY APE L ++++ A D+WS G +L E
Sbjct: 155 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYE 212
Query: 197 IMT 199
+ T
Sbjct: 213 LFT 215
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRA 171
Q+ +G+ Y+HS ++HRDLKPSN+ L + +KIGDFGL + T T Y +
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMS 203
Query: 172 PELLLNCTEYTAAIDIWSVGCILGEIM 198
PE ++ +Y +D++++G IL E++
Sbjct: 204 PE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 20/185 (10%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + I+
Sbjct: 39 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIME 94
Query: 85 ELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
L L ++ ++ D H + Y Q+ +G++Y+ + +HR+L N+L+
Sbjct: 95 YLPYGSLRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENR 153
Query: 143 LKIGDFGLARTTSETDFMTEYVVTR--------WYRAPELLLNCTEYTAAIDIWSVGCIL 194
+KIGDFGL + + EY + WY APE L ++++ A D+WS G +L
Sbjct: 154 VKIGDFGLTKVLPQD---KEYYKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVL 208
Query: 195 GEIMT 199
E+ T
Sbjct: 209 YELFT 213
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 9/182 (4%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI--AIKDIIRPPKKDTFNDVYIVYEL 86
V K+ GN + I ++ + ++K + H +E I A+ + +F D +Y +
Sbjct: 61 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 120
Query: 87 MD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
M+ ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NL+++
Sbjct: 121 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY 180
Query: 143 LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREP 202
+K+ DFG A+ + T Y APE++L Y A+D W++G ++ E+ P
Sbjct: 181 IKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
Query: 203 LF 204
F
Sbjct: 238 PF 239
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD-LHQIIRS-DQQLT 102
R L E ++ +H NV+ ++ ++ K V IV E M+ L +R D Q T
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKP-----VMIVIEFMENGALDAFLRKHDGQFT 143
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 162
L + G++Y+ +HRDL N+L+N++ K+ DFGL+R E D
Sbjct: 144 VIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI-EDDPEAV 202
Query: 163 YVVT------RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
Y T RW APE + ++T+A D+WS G ++ E+M+
Sbjct: 203 YTTTGGKIPVRW-TAPE-AIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 99/238 (41%), Gaps = 54/238 (22%)
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDF-------- 159
++ L + LK +H ++HRD+KPSN L N + DFGLA+ T +T
Sbjct: 122 YMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 160 ---------------------MTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
+ T +RAPE+L C T AID+WS G I ++
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 199 T-REPLFPGKDYVHQLRLITELIGSPD--DASLGFLRSDNARRYV-----RQL-PRCRKQ 249
+ R P + D + L I + GS + A+ F +S + V R+L R R
Sbjct: 242 SGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGM 301
Query: 250 QFAT-RFPNKSSGAVDLLE--------------KMLVFDPNKRITVEEALRHPYLQSL 292
+T + + G LE K+L +P RIT EEAL HP+ + +
Sbjct: 302 DSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 78 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 135
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 139 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 198
Query: 136 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 199 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 256
Query: 196 EI-MTREPLFP 205
E+ + R P+ P
Sbjct: 257 EMAVGRYPIPP 267
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD 88
VAIK + + + R L E ++ +H N+I ++ ++ K V I+ E M+
Sbjct: 60 VAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP-----VMIITEYME 113
Query: 89 T-DLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
L +R +D + T L + G+KY+ S +HRDL N+L+N++ K+
Sbjct: 114 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVS 173
Query: 147 DFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
DFG++R E + T + RW APE + ++T+A D+WS G ++ E+M+
Sbjct: 174 DFGMSRVLEDDPEAAYTTRGGKIPIRW-TAPEAIAY-RKFTSASDVWSYGIVMWEVMS 229
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 135 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 194
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGATWTL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 251
Query: 197 IMTREPLF 204
+ P F
Sbjct: 252 MAAGYPPF 259
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 46/260 (17%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQ--LTDDHCQ 107
E++++ +++E + + II +++VYI+YE M+ D I++ D+ + D +
Sbjct: 93 ELQIITDIKNEYCLTCEGIIT-----NYDEVYIIYEYMEND--SILKFDEYFFVLDKNYT 145
Query: 108 YFL---------YQLLRGLKYVHS-ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
F+ +L Y+H+ ++ HRD+KPSN+L++ + +K+ DFG E+
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG------ES 199
Query: 158 DFMTEYVV-----TRWYRAPELLLNCTEYTAA-IDIWSVGCILGEIMTREPLFPGKDYVH 211
++M + + T + PE N + Y A +DIWS+G L + F K +
Sbjct: 200 EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV 259
Query: 212 QL--RLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKM 269
+L + T+ I P D R + +K + F S+ +D L+
Sbjct: 260 ELFNNIRTKNIEYPLD-----------RNHFLYPLTNKKSTCSNNFL--SNEDIDFLKLF 306
Query: 270 LVFDPNKRITVEEALRHPYL 289
L +P +RIT E+AL+H +L
Sbjct: 307 LRKNPAERITSEDALKHEWL 326
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--AGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 27/221 (12%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQ 107
E+ +LR H N++ P+ + IV + + H + S+ +
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTAPQ------LAIVTQWCEGSSLYHHLHASETKFEMKKLI 123
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA----RTTSETDFMTEY 163
Q RG+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA R + F
Sbjct: 124 DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 164 VVTRWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 221
W APE+ + + Y+ D+++ G +L E+MT + + + Q I E++G
Sbjct: 184 GSILWM-APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEMVG 239
Query: 222 ----SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FP 256
SPD L +RS+ +R R + C K++ R FP
Sbjct: 240 RGSLSPD---LSKVRSNCPKRMKRLMAECLKKKRDERPSFP 277
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 27/221 (12%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQ 107
E+ +LR H N++ P+ + IV + + H + S+ +
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHASETKFEMKKLI 123
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA----RTTSETDFMTEY 163
Q RG+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA R + F
Sbjct: 124 DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 164 VVTRWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 221
W APE+ + + Y+ D+++ G +L E+MT + + + Q I E++G
Sbjct: 184 GSILWM-APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEMVG 239
Query: 222 ----SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FP 256
SPD L +RS+ +R R + C K++ R FP
Sbjct: 240 RGSLSPD---LSKVRSNCPKRMKRLMAECLKKKRDERPSFP 277
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 25/220 (11%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQ 107
E+ +LR H N++ P+ + IV + + H + S+ +
Sbjct: 58 EVGVLRKTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHASETKFEMKKLI 111
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---V 164
Q RG+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++
Sbjct: 112 DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS 171
Query: 165 VTRWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG- 221
+ + APE+ + + Y+ D+++ G +L E+MT + + + Q I E++G
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEMVGR 228
Query: 222 ---SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FP 256
SPD L +RS+ +R R + C K++ R FP
Sbjct: 229 GSLSPD---LSKVRSNCPKRMKRLMAECLKKKRDERPSFP 265
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 51/258 (19%)
Query: 49 REIKLLRHMEHENVIA------IKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSD 98
+EI +L+ H IA IK PP D + +++V E TDL + + +
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKK--NPPGMD--DQLWLVMEFCGAGSVTDLIKNTKGN 124
Query: 99 QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET- 157
L ++ Y ++LRGL ++H V+HRD+K N+LL + ++K+ DFG++ T
Sbjct: 125 T-LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183
Query: 158 DFMTEYVVTRWYRAPELLLNCTE-----YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ 212
++ T ++ APE++ C E Y D+WS+G E+ P P D +H
Sbjct: 184 GRRNTFIGTPYWMAPEVIA-CDENPDATYDFKSDLWSLGITAIEMAEGAP--PLCD-MHP 239
Query: 213 LRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVF 272
+R + FL N PR + ++++ +F + +E LV
Sbjct: 240 MRAL-------------FLIPRNP------APRLKSKKWSKKFQS-------FIESCLVK 273
Query: 273 DPNKRITVEEALRHPYLQ 290
+ ++R E+ ++HP+++
Sbjct: 274 NHSQRPATEQLMKHPFIR 291
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
A++ T +EVAI+++ + EI ++R ++ N++ D ++
Sbjct: 40 AMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLD-----SYLVGDE 92
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+++V E + + ++ + + + L+ L+++HS V+HR++K N+LL
Sbjct: 93 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGM 152
Query: 140 SCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
+K+ DFG A+ T E + V T ++ APE++ Y +DIWS+G + E++
Sbjct: 153 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMI 211
Query: 199 TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK 258
EP + ++ + L LI G+P+ + P K
Sbjct: 212 EGEPPYLNENPLRALYLIAT-NGTPE----------------------------LQNPEK 242
Query: 259 SSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
S D L + L D KR + +E ++H +L+
Sbjct: 243 LSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI--AIKDIIRPPKKDTFNDVYIVYEL 86
V K+ GN + I ++ + ++K + H +E I A+ + +F D +Y +
Sbjct: 81 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 140
Query: 87 MD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
M+ ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL++
Sbjct: 141 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 200
Query: 143 LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREP 202
+++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E+ P
Sbjct: 201 IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYP 257
Query: 203 LF 204
F
Sbjct: 258 PF 259
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 29/204 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N+ T+ V K G + + L E L++ ++H+ ++ + ++ +
Sbjct: 29 VWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYAVVTREEP- 82
Query: 76 TFNDVYIVYELM-DTDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+YI+ E M L ++SD+ +L D F Q+ G+ Y+ + +H
Sbjct: 83 ----IYIITEYMAKGSLLDFLKSDEGGKVLLPKLID-----FSAQIAEGMAYIERKNYIH 133
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L++ S KI DFGLAR + ++ +W APE +N +T
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPE-AINFGCFTIK 191
Query: 185 IDIWSVGCILGEIMTREPL-FPGK 207
D+WS G +L EI+T + +PG+
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYPGR 215
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G++ D+ I+ + N VAIK N + + + L+E +R +H +++ +
Sbjct: 21 GQFGDVHQGIYMSPENPAM--AVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKLI 77
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 124
+I T N V+I+ EL + ++ + D LY QL L Y+ S
Sbjct: 78 GVI------TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPELLLNCTEY 181
+HRD+ N+L++A+ +K+GDFGL+R ++ + + +W APE +N +
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APE-SINFRRF 189
Query: 182 TAAIDIWSVGCILGEIM 198
T+A D+W G + EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 78 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 135
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 104 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 163
Query: 136 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 164 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 221
Query: 196 EI-MTREPLFP 205
E+ + R P+ P
Sbjct: 222 EMAVGRYPIPP 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI--AIKDIIRPPKKDTFNDVYIVYEL 86
V K+ GN + I ++ + ++K + H +E I A+ + +F D +Y +
Sbjct: 61 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 120
Query: 87 MD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
M+ ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL++
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
Query: 143 LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREP 202
+++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E+ P
Sbjct: 181 IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYP 237
Query: 203 LF 204
F
Sbjct: 238 PF 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--XGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI--AIKDIIRPPKKDTFNDVYIVYEL 86
V K+ GN + I ++ + ++K + H +E I A+ + +F D +Y +
Sbjct: 53 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 112
Query: 87 MD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
M+ ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL++
Sbjct: 113 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 172
Query: 143 LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREP 202
+++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E+ P
Sbjct: 173 IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYP 229
Query: 203 LF 204
F
Sbjct: 230 PF 231
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + I+
Sbjct: 42 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIME 97
Query: 85 ELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
L L ++ ++ D H + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 98 YLPYGSLRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 156
Query: 143 LKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+KIGDFGL + + + WY APE L ++++ A D+WS G +L E+
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYEL 214
Query: 198 MT 199
T
Sbjct: 215 FT 216
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 78 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 135
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 136 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 194
Query: 196 EI-MTREPLFP 205
E+ + R P+ P
Sbjct: 195 EMAVGRYPIPP 205
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI--AIKDIIRPPKKDTFNDVYIVYEL 86
V K+ GN + I ++ + ++K + H +E I A+ + +F D +Y +
Sbjct: 61 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 120
Query: 87 MD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
M+ ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL++
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
Query: 143 LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREP 202
+++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E+ P
Sbjct: 181 IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYP 237
Query: 203 LF 204
F
Sbjct: 238 PF 239
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD 88
VAIK + + + R L E ++ +H NVI ++ ++ K T V I+ E M+
Sbjct: 38 VAIKTLKSGYTEK-QRRDFLSEASIMGQFDHPNVIHLEGVV---TKST--PVMIITEFME 91
Query: 89 T-DLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
L +R +D Q T L + G+KY+ + +HR L N+L+N++ K+
Sbjct: 92 NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVS 151
Query: 147 DFGLAR----TTSE---TDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
DFGL+R TS+ T + + RW APE + ++T+A D+WS G ++ E+M+
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPE-AIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI--AIKDIIRPPKKDTFNDVYIVYEL 86
V K+ GN + I ++ + ++K + H +E I A+ + +F D +Y +
Sbjct: 61 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 120
Query: 87 MD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
M+ ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL++
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
Query: 143 LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREP 202
+++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E+ P
Sbjct: 181 IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYP 237
Query: 203 LF 204
F
Sbjct: 238 PF 239
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + I+
Sbjct: 44 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIME 99
Query: 85 ELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
L L ++ ++ D H + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 100 YLPYGSLRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 158
Query: 143 LKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+KIGDFGL + + + WY APE L ++++ A D+WS G +L E+
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYEL 216
Query: 198 MT 199
T
Sbjct: 217 FT 218
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NL+
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +K+ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NL+
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +K+ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 231
Query: 197 IMTREPLF 204
+ P F
Sbjct: 232 MAAGYPPF 239
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 115 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 231
Query: 197 IMTREPLF 204
+ P F
Sbjct: 232 MAAGYPPF 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + I+
Sbjct: 43 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIME 98
Query: 85 ELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
L L ++ ++ D H + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 99 YLPYGSLRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 157
Query: 143 LKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+KIGDFGL + + + WY APE L ++++ A D+WS G +L E+
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYEL 215
Query: 198 MT 199
T
Sbjct: 216 FT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + I+
Sbjct: 41 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIME 96
Query: 85 ELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
L L ++ ++ D H + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 97 YLPYGSLRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 155
Query: 143 LKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+KIGDFGL + + + WY APE L ++++ A D+WS G +L E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYEL 213
Query: 198 MT 199
T
Sbjct: 214 FT 215
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NL+
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +K+ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 231
Query: 197 IMTREPLF 204
+ P F
Sbjct: 232 MAAGYPPF 239
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + I+
Sbjct: 45 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIME 100
Query: 85 ELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
L L ++ ++ D H + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 101 YLPYGSLRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 159
Query: 143 LKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+KIGDFGL + + + WY APE L ++++ A D+WS G +L E+
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYEL 217
Query: 198 MT 199
T
Sbjct: 218 FT 219
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 78 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 135
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 80 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 139
Query: 136 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
L+N+ ++K+ DFG++ + + E+V TR Y +PE L T Y+ DIWS+G L
Sbjct: 140 LVNSRGEIKLCDFGVSGQLID-EMANEFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 197
Query: 196 EI 197
E+
Sbjct: 198 EM 199
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NL+
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFGLA+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGLAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 231
Query: 197 IMTREPLF 204
+ P F
Sbjct: 232 MAAGYPPF 239
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + I+
Sbjct: 69 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIME 124
Query: 85 ELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
L L ++ ++ D H + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 125 YLPYGSLRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 183
Query: 143 LKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+KIGDFGL + + + WY APE L ++++ A D+WS G +L E+
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYEL 241
Query: 198 MT 199
T
Sbjct: 242 FT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + I+
Sbjct: 38 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIME 93
Query: 85 ELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
L L ++ ++ D H + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 94 YLPYGSLRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 143 LKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+KIGDFGL + + + WY APE L ++++ A D+WS G +L E+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYEL 210
Query: 198 MT 199
T
Sbjct: 211 FT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 18/184 (9%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV--YI 82
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + + Y+
Sbjct: 37 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 94
Query: 83 VYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
Y + L + + DH + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 95 PYGSLRDYLQK-----HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE 149
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILG 195
+KIGDFGL + + + WY APE L ++++ A D+WS G +L
Sbjct: 150 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLY 207
Query: 196 EIMT 199
E+ T
Sbjct: 208 ELFT 211
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWTL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 231
Query: 197 IMTREPLF 204
+ P F
Sbjct: 232 MAAGYPPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G++ D+ I+ + N VAIK N + + + L+E +R +H +++ +
Sbjct: 401 GQFGDVHQGIYMSPENPAM--AVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVKLI 457
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 124
+I T N V+I+ EL + ++ + D LY QL L Y+ S
Sbjct: 458 GVI------TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPELLLNCTEY 181
+HRD+ N+L++A+ +K+GDFGL+R ++ + + +W APE +N +
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APE-SINFRRF 569
Query: 182 TAAIDIWSVGCILGEIM 198
T+A D+W G + EI+
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 18/184 (9%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV--YI 82
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + + Y+
Sbjct: 36 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 93
Query: 83 VYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
Y + L + + DH + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 94 PYGSLRDYLQK-----HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE 148
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILG 195
+KIGDFGL + + + WY APE L ++++ A D+WS G +L
Sbjct: 149 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLY 206
Query: 196 EIMT 199
E+ T
Sbjct: 207 ELFT 210
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 29/204 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N+ T+ V K G + + L E L++ ++H+ ++ + ++ +
Sbjct: 28 VWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEP- 81
Query: 76 TFNDVYIVYELM-DTDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+YI+ E M L ++SD+ +L D F Q+ G+ Y+ + +H
Sbjct: 82 ----IYIITEFMAKGSLLDFLKSDEGGKVLLPKLID-----FSAQIAEGMAYIERKNYIH 132
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L++ S KI DFGLAR + ++ +W APE +N +T
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPE-AINFGCFTIK 190
Query: 185 IDIWSVGCILGEIMTREPL-FPGK 207
++WS G +L EI+T + +PG+
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYPGR 214
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 18/184 (9%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV--YI 82
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + + Y+
Sbjct: 56 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 83 VYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
Y + L + + DH + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 114 PYGSLRDYLQK-----HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE 168
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILG 195
+KIGDFGL + + + WY APE L ++++ A D+WS G +L
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLY 226
Query: 196 EIMT 199
E+ T
Sbjct: 227 ELFT 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + I+
Sbjct: 38 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIME 93
Query: 85 ELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
L L ++ ++ D H + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 94 YLPYGSLRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 143 LKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+KIGDFGL + + + WY APE L ++++ A D+WS G +L E+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYEL 210
Query: 198 MT 199
T
Sbjct: 211 FT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 18/184 (9%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV--YI 82
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + + Y+
Sbjct: 56 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 83 VYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
Y + L + + DH + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 114 PYGSLRDYLQK-----HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE 168
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILG 195
+KIGDFGL + + + WY APE L ++++ A D+WS G +L
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLY 226
Query: 196 EIMT 199
E+ T
Sbjct: 227 ELFT 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 25 TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVY 84
T E VA+KK+ ++ + + R REI++L+ ++H+N++ K + + I+
Sbjct: 41 TGEVVAVKKLQHSTEEHL--RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIME 96
Query: 85 ELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
L L +++ + D H + Y Q+ +G++Y+ + +HRDL N+L+
Sbjct: 97 YLPYGSLRDYLQAHAERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 155
Query: 143 LKIGDFGLARTTSETDFMTEYVVTR-----WYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
+KIGDFGL + + + WY APE L ++++ A D+WS G +L E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYEL 213
Query: 198 MT 199
T
Sbjct: 214 FT 215
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 45 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDD 104
R L E ++ +H N+I ++ ++ K Y+ +DT L ++D Q T
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK---KNDGQFTVI 124
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMT 161
L + G+KY+ +HRDL N+L+N++ K+ DFGL+R E + T
Sbjct: 125 QLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 184
Query: 162 E--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ RW APE + ++T+A D+WS G ++ E+++
Sbjct: 185 RGGKIPIRW-TAPEAIA-FRKFTSASDVWSYGIVMWEVVS 222
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 78 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 135
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 136 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 194
Query: 196 EI-MTREPLFP 205
E+ + R P+ P
Sbjct: 195 EMAVGRYPIPP 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 115
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + ++
Sbjct: 116 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 175
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 176 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 100 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 159
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 160 IDQQGYIQVTDFGFAKRVKGRTWTL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 216
Query: 197 IMTREPLF 204
+ P F
Sbjct: 217 MAAGYPPF 224
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 101 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 160
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 161 IDEQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 217
Query: 197 IMTREPLF 204
+ P F
Sbjct: 218 MAAGYPPF 225
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 43 DARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQL 101
+ R +E+++++ +EH ++ + + + D+++V +L+ DL ++ +
Sbjct: 58 EVRNVFKELQIMQGLEHPFLVNLWYSFQDEE-----DMFMVVDLLLGGDLRYHLQQNVHF 112
Query: 102 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT 161
++ + F+ +L+ L Y+ + ++HRD+KP N+LL+ + I DF +A +T
Sbjct: 113 KEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172
Query: 162 EYVVTRWYRAPELLLN--CTEYTAAIDIWSVGCILGEIM 198
T+ Y APE+ + Y+ A+D WS+G E++
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 61 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 114
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + ++
Sbjct: 115 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 174
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 175 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 218
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 78 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 135
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 136 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 194
Query: 196 EI-MTREPLFP 205
E+ + R P+ P
Sbjct: 195 EMAVGRYPIPP 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 51 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 104
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + ++
Sbjct: 105 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 164
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 165 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 208
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD 88
VAIK + + + R L E ++ +H N+I ++ ++ K V I+ E M+
Sbjct: 39 VAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP-----VMIITEYME 92
Query: 89 T-DLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
L +R +D + T L + G+KY+ S +HRDL N+L+N++ K+
Sbjct: 93 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVS 152
Query: 147 DFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
DFG++R E + T + RW APE + ++T+A D+WS G ++ E+M+
Sbjct: 153 DFGMSRVLEDDPEAAYTTRGGKIPIRW-TAPEAIAY-RKFTSASDVWSYGIVMWEVMS 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 78 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 135
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 136 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 194
Query: 196 EI-MTREPLFP 205
E+ + R P+ P
Sbjct: 195 EMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 78 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 135
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 136 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 195
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 194
Query: 196 EI-MTREPLFP 205
E+ + R P+ P
Sbjct: 195 EMAVGRYPIPP 205
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD 88
VAIK + + + R L E ++ +H N+I ++ ++ K V I+ E M+
Sbjct: 45 VAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP-----VMIITEYME 98
Query: 89 T-DLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
L +R +D + T L + G+KY+ S +HRDL N+L+N++ K+
Sbjct: 99 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVS 158
Query: 147 DFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
DFG++R E + T + RW APE + ++T+A D+WS G ++ E+M+
Sbjct: 159 DFGMSRVLEDDPEAAYTTRGGKIPIRW-TAPEAIAY-RKFTSASDVWSYGIVMWEVMS 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 66 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 119
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + ++
Sbjct: 120 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 179
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 180 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 223
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G ++ EI T +PG
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 214 RLITE 218
+L+ E
Sbjct: 270 KLLKE 274
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 46 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 101
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+KY+ S +HRDL N +L+
Sbjct: 102 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK 161
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + ++ + + T +W L ++T D+WS G +L
Sbjct: 162 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 219
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 220 WELMTRGAPPYP 231
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G ++ EI T +PG
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 258
Query: 214 RLITE 218
+L+ E
Sbjct: 259 KLLKE 263
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G ++ EI T +PG
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 214 RLITE 218
+L+ E
Sbjct: 270 KLLKE 274
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
D+ + R + APE L + YT D+WS G ++ EI T
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 300
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + ++
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 170 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 52 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 107
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+KY+ S +HRDL N +L+
Sbjct: 108 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK 167
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + ++ + + T +W L ++T D+WS G +L
Sbjct: 168 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 225
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 226 WELMTRGAPPYP 237
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G ++ EI T +PG
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 214 RLITE 218
+L+ E
Sbjct: 270 KLLKE 274
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G ++ EI T +PG
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 214 RLITE 218
+L+ E
Sbjct: 270 KLLKE 274
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G ++ EI T +PG
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 214 RLITE 218
+L+ E
Sbjct: 270 KLLKE 274
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 9/182 (4%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI--AIKDIIRPPKKDTFNDVYIVYEL 86
V K+ GN + I ++ + ++K + H +E I A+ + +F D +Y +
Sbjct: 53 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 112
Query: 87 MD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCD 142
M+ ++ +R + + H +++ Q++ +Y+HS +++RDLKP NLL++
Sbjct: 113 MEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 172
Query: 143 LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREP 202
+++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E+ P
Sbjct: 173 IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYP 229
Query: 203 LF 204
F
Sbjct: 230 PF 231
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 72 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 127
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+KY+ S +HRDL N +L+
Sbjct: 128 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK 187
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + ++ + + T +W L ++T D+WS G +L
Sbjct: 188 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 245
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 246 WELMTRGAPPYP 257
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G ++ EI T +PG
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 261
Query: 214 RLITE 218
+L+ E
Sbjct: 262 KLLKE 266
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + + H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G ++ EI T +PG
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 256
Query: 214 RLITE 218
+L+ E
Sbjct: 257 KLLKE 261
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 51 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 106
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+KY+ S +HRDL N +L+
Sbjct: 107 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK 166
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + ++ + + T +W L ++T D+WS G +L
Sbjct: 167 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 224
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 225 WELMTRGAPPYP 236
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 54 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 109
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+KY+ S +HRDL N +L+
Sbjct: 110 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK 169
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + ++ + + T +W L ++T D+WS G +L
Sbjct: 170 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 227
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 228 WELMTRGAPPYP 239
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 53 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 108
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+KY+ S +HRDL N +L+
Sbjct: 109 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK 168
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + ++ + + T +W L ++T D+WS G +L
Sbjct: 169 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 226
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 227 WELMTRGAPPYP 238
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 49 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 104
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+KY+ S +HRDL N +L+
Sbjct: 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK 164
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + ++ + + T +W L ++T D+WS G +L
Sbjct: 165 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 222
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 223 WELMTRGAPPYP 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E ++ +R + + H +++ Q++ +Y+HS +++RDLKP NL+
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +K+ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 73 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 128
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+KY+ S +HRDL N +L+
Sbjct: 129 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK 188
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + ++ + + T +W L ++T D+WS G +L
Sbjct: 189 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 246
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 247 WELMTRGAPPYP 258
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E ++ +R + + H +++ Q++ +Y+HS +++RDLKP NL+
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +K+ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 231
Query: 197 IMTREPLF 204
+ P F
Sbjct: 232 MAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + + H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + + H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + + H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 135 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 194
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 251
Query: 197 IMTREPLF 204
+ P F
Sbjct: 252 MAAGYPPF 259
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 54 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 109
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+KY+ S +HRDL N +L+
Sbjct: 110 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK 169
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + ++ + + T +W L ++T D+WS G +L
Sbjct: 170 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 227
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 228 WELMTRGAPPYP 239
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ R + APE L + YT D+WS G ++ EI T +PG
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 214 RLITE 218
+L+ E
Sbjct: 270 KLLKE 274
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + + H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + + H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + + H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 231
Query: 197 IMTREPLF 204
+ P F
Sbjct: 232 MAAGYPPF 239
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + + H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 109 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 168
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 169 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 225
Query: 197 IMTREPLF 204
+ P F
Sbjct: 226 MAAGYPPF 233
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + + H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 34/200 (17%)
Query: 29 VAIKKIGNAFDNIIDARRTL-REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM 87
VA+K + D + AR+ RE +LL +++HE+++ + + + +V+E M
Sbjct: 48 VAVKALK---DPTLAARKDFQREAELLTNLQHEHIVKFYGVC-----GDGDPLIMVFEYM 99
Query: 88 D-TDLHQIIRS---------DQQLTDDHCQYFLYQLLR-------GLKYVHSASVLHRDL 130
DL++ +R+ D Q + L Q+L G+ Y+ S +HRDL
Sbjct: 100 KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDL 159
Query: 131 KPSNLLLNASCDLKIGDFGLARTTSETDFMT----EYVVTRWYRAPELLLNCTEYTAAID 186
N L+ A+ +KIGDFG++R TD+ + RW PE ++ ++T D
Sbjct: 160 ATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM-PPESIMY-RKFTTESD 217
Query: 187 IWSVGCILGEIMT--REPLF 204
+WS G IL EI T ++P F
Sbjct: 218 VWSFGVILWEIFTYGKQPWF 237
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L+ Y A+D W++G ++ +
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-KGYNKAVDWWALGVLIYQ 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NL+
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE++L Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 131/319 (41%), Gaps = 77/319 (24%)
Query: 47 TLREIKLLRHMEHE-----NVIAIKDIIRPPKKDTFNDVYI--VYELMDTDL-HQIIRSD 98
L EIKLL+ + N + +I K N +++ V+E++ L II+S+
Sbjct: 74 ALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSN 133
Query: 99 QQLTDDHC-QYFLYQLLRGLKYVHS-ASVLHRDLKPSNLLL------------------- 137
Q C + + Q+L+GL Y+HS ++H D+KP N+L+
Sbjct: 134 YQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQK 193
Query: 138 -------------NASCDL---------------KIGDFGLARTTSETDFMTEYVVTRWY 169
+ DL KI D G A + TE + TR Y
Sbjct: 194 AGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHK--HFTEDIQTRQY 251
Query: 170 RAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF---PGKDYVH---QLRLITELIGS- 222
R+ E+L+ Y+ DIWS C+ E+ T + LF G+DY + I EL+GS
Sbjct: 252 RSIEVLIGAG-YSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSI 310
Query: 223 PDDASLGFLRSD---NARRYVRQLPRCRKQQF------ATRFPNKSSGA-VDLLEKMLVF 272
P +L S N R +R + + + +P++ + D L ML
Sbjct: 311 PRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEM 370
Query: 273 DPNKRITVEEALRHPYLQS 291
P KR + E LRHP+L S
Sbjct: 371 VPEKRASAGECLRHPWLNS 389
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++QL+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 196
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G +L EI T +PG
Sbjct: 197 DYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 255
Query: 214 RLITE 218
+L+ E
Sbjct: 256 KLLKE 260
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++QL+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 195
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G +L EI T +PG
Sbjct: 196 DYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 254
Query: 214 RLITE 218
+L+ E
Sbjct: 255 KLLKE 259
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++QL+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 192
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G +L EI T +PG
Sbjct: 193 DYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 251
Query: 214 RLITE 218
+L+ E
Sbjct: 252 KLLKE 256
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++QL+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G +L EI T +PG
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
Query: 214 RLITE 218
+L+ E
Sbjct: 248 KLLKE 252
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + ++I DFGLAR +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G ++ EI T +PG
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 214 RLITE 218
+L+ E
Sbjct: 270 KLLKE 274
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G++ D+ I+ + N VAIK N + + + L+E +R +H +++ +
Sbjct: 401 GQFGDVHQGIYMSPENPAM--AVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVKLI 457
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 124
+I T N V+I+ EL + ++ + D LY QL L Y+ S
Sbjct: 458 GVI------TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPELLLNCTEY 181
+HRD+ N+L++++ +K+GDFGL+R ++ + + +W APE +N +
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APE-SINFRRF 569
Query: 182 TAAIDIWSVGCILGEIM 198
T+A D+W G + EI+
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++QL+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G +L EI T +PG
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 214 RLITE 218
+L+ E
Sbjct: 263 KLLKE 267
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 113 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 168
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+K++ S +HRDL N +L+
Sbjct: 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK 228
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + +F + + T +W L ++T D+WS G +L
Sbjct: 229 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 286
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 287 WELMTRGAPPYP 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++QL+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G +L EI T +PG
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 214 RLITE 218
+L+ E
Sbjct: 263 KLLKE 267
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 54 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 109
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+K++ S +HRDL N +L+
Sbjct: 110 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK 169
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + +F + + T +W L ++T D+WS G +L
Sbjct: 170 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 227
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 228 WELMTRGAPPYP 239
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NL+
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLI 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y APE+++ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIII-SKGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 59 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 114
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+K++ S +HRDL N +L+
Sbjct: 115 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK 174
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + +F + + T +W L ++T D+WS G +L
Sbjct: 175 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 232
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 233 WELMTRGAPPYP 244
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++QL+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G +L EI T +PG
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 214 RLITE 218
+L+ E
Sbjct: 263 KLLKE 267
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D + R + APE L + YT D+WS G ++ EI T +PG
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 214 RLITE 218
+L+ E
Sbjct: 270 KLLKE 274
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++Q+T YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
D + R + APE L + YT D+WS G ++ EI T
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 254
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 72/281 (25%)
Query: 80 VYIVYELMDTDLHQ-IIRSDQQLTDDHC-QYFLYQLLRGLKYVHSAS-VLHRDLKPSNLL 136
+ +V+E++ L + II+S+ Q C + + Q+L+GL Y+H+ ++H D+KP N+L
Sbjct: 104 ICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENIL 163
Query: 137 LNAS-------------------------------------------------CDLKIGD 147
L+ + +KI D
Sbjct: 164 LSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIAD 223
Query: 148 FGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF--- 204
G A + TE + TR YR+ E+L+ + Y DIWS C+ E+ T + LF
Sbjct: 224 LGNACWVHK--HFTEDIQTRQYRSLEVLIG-SGYNTPADIWSTACMAFELATGDYLFEPH 280
Query: 205 PGKDYVH---QLRLITELIGS-------PDDASLGFLRSDNARRYVRQL-PRCRKQQFAT 253
G++Y + LI EL+G S F +++ +L P +
Sbjct: 281 SGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVE 340
Query: 254 RF---PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
++ +++G D L ML P KR T E LRHP+L S
Sbjct: 341 KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 381
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 64 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 117
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + +
Sbjct: 118 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 177
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 178 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 221
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 52 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 105
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HR+L+ +N+L++ + KI DFGLAR + ++
Sbjct: 106 KLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 165
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 166 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 209
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 55 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 110
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+K++ S +HRDL N +L+
Sbjct: 111 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK 170
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + +F + + T +W L ++T D+WS G +L
Sbjct: 171 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 228
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 229 WELMTRGAPPYP 240
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 76 TFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
T + +Y V E ++ DL I+ + + ++ ++ GL ++H +++RDLK N
Sbjct: 91 TVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDN 150
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCI 193
++L++ +KI DFG+ + T E+ T Y APE++ Y ++D W+ G +
Sbjct: 151 VMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVL 209
Query: 194 LGEIMTREPLFPGKD 208
L E++ +P F G+D
Sbjct: 210 LYEMLAGQPPFDGED 224
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 115
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + +
Sbjct: 116 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 175
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 176 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G++ D+ I+ + N VAIK N + + + L+E +R +H +++ +
Sbjct: 21 GQFGDVHQGIYMSPENPAM--AVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKLI 77
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 124
+I T N V+I+ EL + ++ + D LY QL L Y+ S
Sbjct: 78 GVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPELLLNCTEY 181
+HRD+ N+L++++ +K+GDFGL+R ++ + + +W APE +N +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APE-SINFRRF 189
Query: 182 TAAIDIWSVGCILGEIM 198
T+A D+W G + EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + +
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREG 169
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 170 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++QL+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 244
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D+ + R + APE L + YT D+WS G +L EI T +PG
Sbjct: 245 DYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303
Query: 214 RLITE 218
+L+ E
Sbjct: 304 KLLKE 308
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 72/281 (25%)
Query: 80 VYIVYELMDTDLHQ-IIRSDQQLTDDHC-QYFLYQLLRGLKYVHSAS-VLHRDLKPSNLL 136
+ +V+E++ L + II+S+ Q C + + Q+L+GL Y+H+ ++H D+KP N+L
Sbjct: 120 ICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENIL 179
Query: 137 LNAS-------------------------------------------------CDLKIGD 147
L+ + +KI D
Sbjct: 180 LSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIAD 239
Query: 148 FGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF--- 204
G A + TE + TR YR+ E+L+ + Y DIWS C+ E+ T + LF
Sbjct: 240 LGNACWVHK--HFTEDIQTRQYRSLEVLIG-SGYNTPADIWSTACMAFELATGDYLFEPH 296
Query: 205 PGKDYVH---QLRLITELIGS-------PDDASLGFLRSDNARRYVRQL-PRCRKQQFAT 253
G++Y + LI EL+G S F +++ +L P +
Sbjct: 297 SGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVE 356
Query: 254 RFP---NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 291
++ +++G D L ML P KR T E LRHP+L S
Sbjct: 357 KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 54 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 109
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+K++ S +HRDL N +L+
Sbjct: 110 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK 169
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + +F + + T +W L ++T D+WS G +L
Sbjct: 170 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 227
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 228 WELMTRGAPPYP 239
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 53 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 108
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+KY+ S +HRDL N +L+
Sbjct: 109 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK 168
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + + + + T +W L ++T D+WS G +L
Sbjct: 169 FTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 226
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 227 WELMTRGAPPYP 238
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 52 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 107
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+K++ S +HRDL N +L+
Sbjct: 108 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK 167
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + +F + + T +W L ++T D+WS G +L
Sbjct: 168 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 225
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 226 WELMTRGAPPYP 237
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 76 TFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
T + + + +LM+ DLH + ++ +++ +++ GL+++H+ V++RDLKP+N
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN 322
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+LL+ ++I D GLA S+ V T Y APE+L Y ++ D +S+GC+L
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCML 381
Query: 195 GEIM 198
+++
Sbjct: 382 FKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 76 TFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
T + + + +LM+ DLH + ++ +++ +++ GL+++H+ V++RDLKP+N
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN 322
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+LL+ ++I D GLA S+ V T Y APE+L Y ++ D +S+GC+L
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCML 381
Query: 195 GEIM 198
+++
Sbjct: 382 FKLL 385
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + +
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 170 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 65 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 118
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + +
Sbjct: 119 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 178
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 179 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 222
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 76 TFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
T + + + +LM+ DLH + ++ +++ +++ GL+++H+ V++RDLKP+N
Sbjct: 262 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN 321
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+LL+ ++I D GLA S+ V T Y APE+L Y ++ D +S+GC+L
Sbjct: 322 ILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCML 380
Query: 195 GEIM 198
+++
Sbjct: 381 FKLL 384
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 76 TFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
T + + + +LM+ DLH + ++ +++ +++ GL+++H+ V++RDLKP+N
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN 322
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+LL+ ++I D GLA S+ V T Y APE+L Y ++ D +S+GC+L
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCML 381
Query: 195 GEIM 198
+++
Sbjct: 382 FKLL 385
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G++ D+ I+ + N VAIK N + + + L+E +R +H +++ +
Sbjct: 21 GQFGDVHQGIYMSPENPAL--AVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKLI 77
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 124
+I T N V+I+ EL + ++ + D LY QL L Y+ S
Sbjct: 78 GVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPELLLNCTEY 181
+HRD+ N+L++++ +K+GDFGL+R ++ + + +W APE +N +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APE-SINFRRF 189
Query: 182 TAAIDIWSVGCILGEIM 198
T+A D+W G + EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 58 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 111
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + +
Sbjct: 112 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 171
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 172 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G++ D+ I+ + N VAIK N + + + L+E +R +H +++ +
Sbjct: 23 GQFGDVHQGIYMSPENPAL--AVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKLI 79
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 124
+I T N V+I+ EL + ++ + D LY QL L Y+ S
Sbjct: 80 GVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 133
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPELLLNCTEY 181
+HRD+ N+L++++ +K+GDFGL+R ++ + + +W APE +N +
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APE-SINFRRF 191
Query: 182 TAAIDIWSVGCILGEIM 198
T+A D+W G + EI+
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 57 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 110
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + +
Sbjct: 111 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 170
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 171 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G++ D+ I+ + N VAIK N + + + L+E +R +H +++ +
Sbjct: 26 GQFGDVHQGIYMSPENPAL--AVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKLI 82
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 124
+I T N V+I+ EL + ++ + D LY QL L Y+ S
Sbjct: 83 GVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 136
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPELLLNCTEY 181
+HRD+ N+L++++ +K+GDFGL+R ++ + + +W APE +N +
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APE-SINFRRF 194
Query: 182 TAAIDIWSVGCILGEIM 198
T+A D+W G + EI+
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T Y AP ++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPAIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDD 104
L E L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 164
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + +
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
Query: 165 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 206
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 170 AKFPIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G++ D+ I+ + N VAIK N + + + L+E +R +H +++ +
Sbjct: 18 GQFGDVHQGIYMSPENPAL--AVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKLI 74
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 124
+I T N V+I+ EL + ++ + D LY QL L Y+ S
Sbjct: 75 GVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 128
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPELLLNCTEY 181
+HRD+ N+L++++ +K+GDFGL+R ++ + + +W APE +N +
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APE-SINFRRF 186
Query: 182 TAAIDIWSVGCILGEIM 198
T+A D+W G + EI+
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G++ D+ I+ + N VAIK N + + + L+E +R +H +++ +
Sbjct: 49 GQFGDVHQGIYMSPENPAL--AVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKLI 105
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 124
+I T N V+I+ EL + ++ + D LY QL L Y+ S
Sbjct: 106 GVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 159
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPELLLNCTEY 181
+HRD+ N+L++++ +K+GDFGL+R ++ + + +W APE +N +
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APE-SINFRRF 217
Query: 182 TAAIDIWSVGCILGEIM 198
T+A D+W G + EI+
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G++ D+ I+ + N VAIK N + + + L+E +R +H +++ +
Sbjct: 24 GQFGDVHQGIYMSPENPAL--AVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKLI 80
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 124
+I T N V+I+ EL + ++ + D LY QL L Y+ S
Sbjct: 81 GVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 134
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPELLLNCTEY 181
+HRD+ N+L++++ +K+GDFGL+R ++ + + +W APE +N +
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APE-SINFRRF 192
Query: 182 TAAIDIWSVGCILGEIM 198
T+A D+W G + EI+
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N + A+K + N +I + + L E +++ H NV+++ I + + +
Sbjct: 55 NDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLV 110
Query: 82 IVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
++ + DL IR++ T F Q+ +G+K++ S +HRDL N +L+
Sbjct: 111 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK 170
Query: 141 CDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+K+ DFGLAR + +F + + T +W L ++T D+WS G +L
Sbjct: 171 FTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLL 228
Query: 195 GEIMTR-EPLFP 205
E+MTR P +P
Sbjct: 229 WELMTRGAPPYP 240
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 55/305 (18%)
Query: 17 FSAAVNSETR-EEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
F ++ R ++VAIK+I ++ + + + E++ L + H N++ +
Sbjct: 21 FGVVCKAKWRAKDVAIKQI----ESESERKAFIVELRQLSRVNHPNIVKLYGA------- 69
Query: 76 TFNDVYIVYELMDT-DLHQIIRSDQQL---TDDHCQYFLYQLLRGLKYVHS---ASVLHR 128
N V +V E + L+ ++ + L T H + Q +G+ Y+HS +++HR
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 129 DLKPSNLLLNASCD-LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDI 187
DLKP NLLL A LKI DFG A MT + + APE+ + Y+ D+
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEG-SNYSEKCDV 186
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
+S G IL E++TR F + IG P + + + ++ LP+
Sbjct: 187 FSWGIILWEVITRRKPF-------------DEIGGPAFRIMWAVHNGTRPPLIKNLPK-- 231
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHF 307
P +S L+ + DP++R ++EE ++ H + P P +
Sbjct: 232 --------PIES-----LMTRCWSKDPSQRPSMEEIVK----IMTHLMRYFPGADEPLQY 274
Query: 308 DFEHS 312
+HS
Sbjct: 275 PCQHS 279
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 55/305 (18%)
Query: 17 FSAAVNSETR-EEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
F ++ R ++VAIK+I ++ + + + E++ L + H N++ +
Sbjct: 22 FGVVCKAKWRAKDVAIKQI----ESESERKAFIVELRQLSRVNHPNIVKLYGA------- 70
Query: 76 TFNDVYIVYELMDT-DLHQIIRSDQQL---TDDHCQYFLYQLLRGLKYVHS---ASVLHR 128
N V +V E + L+ ++ + L T H + Q +G+ Y+HS +++HR
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 129 DLKPSNLLLNASCD-LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDI 187
DLKP NLLL A LKI DFG A MT + + APE+ + Y+ D+
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEG-SNYSEKCDV 187
Query: 188 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 247
+S G IL E++TR F + IG P + + + ++ LP+
Sbjct: 188 FSWGIILWEVITRRKPF-------------DEIGGPAFRIMWAVHNGTRPPLIKNLPK-- 232
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHF 307
P +S L+ + DP++R ++EE ++ H + P P +
Sbjct: 233 --------PIES-----LMTRCWSKDPSQRPSMEEIVK----IMTHLMRYFPGADEPLQY 275
Query: 308 DFEHS 312
+HS
Sbjct: 276 PCQHS 280
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 66
G++ D+ I+ + N VAIK N + + + L+E +R +H +++ +
Sbjct: 21 GQFGDVHQGIYMSPENPAM--AVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKLI 77
Query: 67 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 124
+I T N V+I+ EL + ++ + D LY QL L Y+ S
Sbjct: 78 GVI------TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPELLLNCTEY 181
+HRD+ N+L++++ +K+GDFGL+R ++ + +W APE +N +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM-APE-SINFRRF 189
Query: 182 TAAIDIWSVGCILGEIM 198
T+A D+W G + EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 22/232 (9%)
Query: 2 SVKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 61
V RGE+D S AV + ++ + A D+ I RE+ + ++H N
Sbjct: 32 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---AMDDFI------REVNAMHSLDHRN 82
Query: 62 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 121
+I + ++ P ++ + L+D ++ + + Q+ G+ Y+
Sbjct: 83 LIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 122 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRAPELLLN 177
S +HRDL NLLL +KIGDFGL R + D M E+ V + APE L
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 178 CTEYTAAIDIWSVGCILGEIMT--REPLFP--GKDYVHQLRLITELIGSPDD 225
T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 199 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 31 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 79
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M+ L ++ + QL D Q + G+ YV + +H
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ-----IASGMAYVERMNYVH 134
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 192
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPG 215
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 22/232 (9%)
Query: 2 SVKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 61
V RGE+D S AV + ++ + A D+ I RE+ + ++H N
Sbjct: 22 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---AMDDFI------REVNAMHSLDHRN 72
Query: 62 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 121
+I + ++ P ++ + L+D ++ + + Q+ G+ Y+
Sbjct: 73 LIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 122 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRAPELLLN 177
S +HRDL NLLL +KIGDFGL R + D M E+ V + APE L
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 178 CTEYTAAIDIWSVGCILGEIMT--REPLFP--GKDYVHQLRLITELIGSPDD 225
T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 189 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR + K GN + L+E ++++ + HE ++ + ++
Sbjct: 201 VWMGTWNGTTRVAIKTLKPGN-----MSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 249
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 304
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGL R + ++ +W APE L +T
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 362
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 363 SDVWSFGILLTELTTKGRVPYPG 385
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 22/232 (9%)
Query: 2 SVKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 61
V RGE+D S AV + ++ + A D+ I RE+ + ++H N
Sbjct: 22 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---AMDDFI------REVNAMHSLDHRN 72
Query: 62 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 121
+I + ++ P ++ + L+D ++ + + Q+ G+ Y+
Sbjct: 73 LIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 122 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRAPELLLN 177
S +HRDL NLLL +KIGDFGL R + D M E+ V + APE L
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 178 CTEYTAAIDIWSVGCILGEIMT--REPLFP--GKDYVHQLRLITELIGSPDD 225
T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 189 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 22/232 (9%)
Query: 2 SVKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 61
V RGE+D S AV + ++ + A D+ I RE+ + ++H N
Sbjct: 32 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---AMDDFI------REVNAMHSLDHRN 82
Query: 62 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 121
+I + ++ P ++ + L+D ++ + + Q+ G+ Y+
Sbjct: 83 LIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 122 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRAPELLLN 177
S +HRDL NLLL +KIGDFGL R + D M E+ V + APE L
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 178 CTEYTAAIDIWSVGCILGEIMT--REPLFP--GKDYVHQLRLITELIGSPDD 225
T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 199 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 283 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 331
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 386
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFTIK 444
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 445 SDVWSFGILLTELTTKGRVPYPG 467
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 34 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 82
Query: 76 TFNDVYIVYELMDTD-LHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 137
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 195
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPG 218
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 22/232 (9%)
Query: 2 SVKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 61
V RGE+D S AV + ++ + A D+ I RE+ + ++H N
Sbjct: 26 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---AMDDFI------REVNAMHSLDHRN 76
Query: 62 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 121
+I + ++ P ++ + L+D ++ + + Q+ G+ Y+
Sbjct: 77 LIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 122 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRAPELLLN 177
S +HRDL NLLL +KIGDFGL R + D M E+ V + APE L
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 178 CTEYTAAIDIWSVGCILGEIMT--REPLFP--GKDYVHQLRLITELIGSPDD 225
T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 193 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++QL+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 158 DFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQL 213
D + R + APE L + YT D+WS G +L EI T +PG
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 214 RLITE 218
+L+ E
Sbjct: 263 KLLKE 267
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 22/232 (9%)
Query: 2 SVKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 61
V RGE+D S AV + ++ + A D+ I RE+ + ++H N
Sbjct: 26 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---AMDDFI------REVNAMHSLDHRN 76
Query: 62 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 121
+I + ++ P ++ + L+D ++ + + Q+ G+ Y+
Sbjct: 77 LIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 122 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRAPELLLN 177
S +HRDL NLLL +KIGDFGL R + D M E+ V + APE L
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 178 CTEYTAAIDIWSVGCILGEIMT--REPLFP--GKDYVHQLRLITELIGSPDD 225
T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 193 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 106/221 (47%), Gaps = 22/221 (9%)
Query: 39 DNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTF-----------NDVYIVYELM 87
+ + A + L++ +L+ E +++++ ++++ K F + +Y V + +
Sbjct: 62 EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI 121
Query: 88 DT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 146
+ +L ++ ++ + +++ ++ L Y+HS ++++RDLKP N+LL++ + +
Sbjct: 122 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLT 181
Query: 147 DFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFP 205
DFGL + E + T + T Y APE +L+ Y +D W +G +L E++ P F
Sbjct: 182 DFGLCKENIEHNSTTSTFCGTPEYLAPE-VLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 240
Query: 206 GKDYVHQ--------LRLITELIGSPDDASLGFLRSDNARR 238
++ L+L + S G L+ D +R
Sbjct: 241 SRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKR 281
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
TL E ++L++ H + A+K + T + + V E + +L + ++ ++D
Sbjct: 57 TLTENRVLQNSRHPFLTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRERVFSEDR 111
Query: 106 CQYFLYQLLRGLKYVHS-ASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEY 163
+++ +++ L Y+HS +V++RDLK NL+L+ +KI DFGL + + M +
Sbjct: 112 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF 171
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL-- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 172 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Query: 220 --IGSPDDASL--GFLRSDNARR 238
P+ SL G L+ D +R
Sbjct: 231 PRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 65
G + + + + N T E VA+K + D R + EI +LR + HE++I
Sbjct: 25 GHFGKVSLYCYDP-TNDGTGEMVAVKAL--KADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 66 KDIIRPPKKDTFNDV--YI-VYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 122
K + + V Y+ + L D I Q L F Q+ G+ Y+HS
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL------FAQQICEGMAYLHS 135
Query: 123 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRAPEL 174
+HR+L N+LL+ +KIGDFGLA+ E EY R WY APE
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFWY-APEC 191
Query: 175 LLNCTEYTAAIDIWSVGCILGEIMT 199
L Y A+ D+WS G L E++T
Sbjct: 192 LKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 22/232 (9%)
Query: 2 SVKLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 61
V RGE+D S AV + ++ + A D+ I RE+ + ++H N
Sbjct: 22 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---AMDDFI------REVNAMHSLDHRN 72
Query: 62 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 121
+I + ++ P ++ + L+D ++ + + Q+ G+ Y+
Sbjct: 73 LIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 122 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRAPELLLN 177
S +HRDL NLLL +KIGDFGL R + D M E+ V + APE L
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 178 CTEYTAAIDIWSVGCILGEIMT--REPLFP--GKDYVHQLRLITELIGSPDD 225
T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 189 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 31 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 79
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M+ L ++ + QL D Q + G+ YV + +H
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ-----IASGMAYVERMNYVH 134
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKW-TAPEAALY-GRFTIK 192
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPG 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 25 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 73
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 128
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 186
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 187 SDVWSFGILLTELTTKGRVPYPG 209
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 34 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 82
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 137
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 195
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPG 218
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 34 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 82
Query: 76 TFNDVYIVYELMDTD-LHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 137
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 195
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPG 218
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
TL E ++L++ H + A+K + T + + V E + +L + ++ ++D
Sbjct: 56 TLTENRVLQNSRHPFLTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRERVFSEDR 110
Query: 106 CQYFLYQLLRGLKYVHS-ASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEY 163
+++ +++ L Y+HS +V++RDLK NL+L+ +KI DFGL + + M +
Sbjct: 111 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF 170
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL-- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 171 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 220 --IGSPDDASL--GFLRSDNARR 238
P+ SL G L+ D +R
Sbjct: 230 PRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 23 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 71
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 126
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 184
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 185 SDVWSFGILLTELTTKGRVPYPG 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 34 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 82
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 137
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 195
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPG 218
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
TL E ++L++ H + A+K + T + + V E + +L + ++ ++D
Sbjct: 55 TLTENRVLQNSRHPFLTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRERVFSEDR 109
Query: 106 CQYFLYQLLRGLKYVHS-ASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEY 163
+++ +++ L Y+HS +V++RDLK NL+L+ +KI DFGL + + M +
Sbjct: 110 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF 169
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL-- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 170 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Query: 220 --IGSPDDASL--GFLRSDNARR 238
P+ SL G L+ D +R
Sbjct: 229 PRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIKDIIRPPK 73
++ VN+ T VA+KK+ D + + +EIK++ +HEN++ +
Sbjct: 47 VYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF----- 98
Query: 74 KDTFNDVYIVYELMDT----DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRD 129
+D+ +VY M D + L+ G+ ++H +HRD
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 158
Query: 130 LKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNCTEYTAAID 186
+K +N+LL+ + KI DFGLAR + ++T + V T Y APE L E T D
Sbjct: 159 IKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG--EITPKSD 216
Query: 187 IWSVGCILGEIMTREP 202
I+S G +L EI+T P
Sbjct: 217 IYSFGVVLLEIITGLP 232
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 34 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 82
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 137
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 195
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPG 218
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 76 TFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
T + +Y V E ++ DL I+ + + H ++ ++ GL ++ S +++RDLK N
Sbjct: 413 TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN 472
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEYTAAIDIWSVGCI 193
++L++ +KI DFG+ + T+ + T Y APE++ Y ++D W+ G +
Sbjct: 473 VMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVL 531
Query: 194 LGEIMTREPLFPGKDYVHQLRLITE 218
L E++ + F G+D + I E
Sbjct: 532 LYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 27 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 75
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 130
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 188
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 189 SDVWSFGILLTELTTKGRVPYPG 211
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
TL E ++L++ H + A+K + T + + V E + +L + ++ ++D
Sbjct: 195 TLTENRVLQNSRHPFLTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRERVFSEDR 249
Query: 106 CQYFLYQLLRGLKYVHS-ASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEY 163
+++ +++ L Y+HS +V++RDLK NL+L+ +KI DFGL + + M +
Sbjct: 250 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 309
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL-- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 310 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 368
Query: 220 --IGSPDDASL--GFLRSDNARR 238
P+ SL G L+ D +R
Sbjct: 369 PRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 47 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDH 105
TL E ++L++ H + A+K + T + + V E + +L + ++ ++D
Sbjct: 198 TLTENRVLQNSRHPFLTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRERVFSEDR 252
Query: 106 CQYFLYQLLRGLKYVHS-ASVLHRDLKPSNLLLNASCDLKIGDFGLAR-TTSETDFMTEY 163
+++ +++ L Y+HS +V++RDLK NL+L+ +KI DFGL + + M +
Sbjct: 253 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 312
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL-- 219
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 313 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 371
Query: 220 --IGSPDDASL--GFLRSDNARR 238
P+ SL G L+ D +R
Sbjct: 372 PRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 200 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 248
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 303
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 361
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPG 384
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 78 NDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL 136
+++Y+V E + ++ +R + ++ H +++ Q++ +Y+HS +++RDLKP NLL
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 137 LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGE 196
++ +++ DFG A+ + T APE++L+ Y A+D W++G ++ E
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEALAPEIILS-KGYNKAVDWWALGVLIYE 230
Query: 197 IMTREPLF 204
+ P F
Sbjct: 231 MAAGYPPF 238
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 49 REIKLLRHMEHENVIAIKDIIRP----PKKDTFND-------VYIVYELMDTD-LHQII- 95
RE+K L ++H N++ P+ + N ++I E D L Q I
Sbjct: 53 REVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 112
Query: 96 -RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT 154
R ++L Q+ +G+ Y+HS +++RDLKPSN+ L + +KIGDFGL +
Sbjct: 113 KRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
Query: 155 SETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 198
T Y +PE ++ +Y +D++++G IL E++
Sbjct: 173 KNDGKRXRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 76 TFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSN 134
T + +Y V E ++ DL I+ + + H ++ ++ GL ++ S +++RDLK N
Sbjct: 92 TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN 151
Query: 135 LLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEYTAAIDIWSVGCI 193
++L++ +KI DFG+ + T+ + T Y APE++ Y ++D W+ G +
Sbjct: 152 VMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVL 210
Query: 194 LGEIMTREPLFPGKD 208
L E++ + F G+D
Sbjct: 211 LYEMLAGQAPFEGED 225
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 200 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 248
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 303
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 361
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPG 384
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 200 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 248
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 303
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 361
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPG 384
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 34 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV------ 82
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 137
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 195
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPG 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 65
G + + + + N T E VA+K + D R + EI +LR + HE++I
Sbjct: 25 GHFGKVSLYCYDP-TNDGTGEMVAVKAL--KADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 66 KDIIRPPKKDTFNDV--YI-VYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 122
K + + V Y+ + L D I Q L F Q+ G+ Y+H+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL------FAQQICEGMAYLHA 135
Query: 123 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRAPEL 174
+HR+L N+LL+ +KIGDFGLA+ E EY R WY APE
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFWY-APEC 191
Query: 175 LLNCTEYTAAIDIWSVGCILGEIMT 199
L Y A+ D+WS G L E++T
Sbjct: 192 LKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 109/218 (50%), Gaps = 40/218 (18%)
Query: 99 QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR--TTSE 156
++ T+ Q ++ +++ L+++H +++RD+K N+LL+++ + + DFGL++ E
Sbjct: 154 ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 213
Query: 157 TDFMTEYVVTRWYRAPELLLNC-TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRL 215
T+ ++ T Y AP+++ + + A+D WS+G ++ E++T F
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT---------- 263
Query: 216 ITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSG-AVDLLEKMLVFDP 274
+ G + +++ +RR ++ P +P + S A DL++++L+ DP
Sbjct: 264 ---VDGEKNS------QAEISRRILKSEP---------PYPQEMSALAKDLIQRLLMKDP 305
Query: 275 NKRIT-----VEEALRHPYLQSLH--DLNDEPVCPRPF 305
KR+ +E H + Q ++ DL + V P PF
Sbjct: 306 KKRLGCGPRDADEIKEHLFFQKINWDDLAAKKV-PAPF 342
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 34 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 82
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 137
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL +N+L+ + K+ DFGLAR + ++ +W APE L +T
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAALY-GRFTIK 195
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPG 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 41/194 (21%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLL--NASCDLKIGDFGLAR-----TTSETDFMTEYV 164
Q+ L Y+H+ + HRD+KP N L N S ++K+ DFGL++ E MT
Sbjct: 176 QIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA 235
Query: 165 VTRWYRAPELLLNCTE-YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 223
T ++ APE+L E Y D WS G +L ++ FPG V+ I++++
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPG---VNDADTISQVL--- 289
Query: 224 DDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK---SSGAVDLLEKMLVFDPNKRITV 280
++ PN S A DLL +L + ++R
Sbjct: 290 ------------------------NKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA 325
Query: 281 EEALRHPYLQSLHD 294
AL+HP++ D
Sbjct: 326 MRALQHPWISQFSD 339
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 75 DTFNDVYIVYELMDTD-----LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRD 129
+T D+ +V +M+ ++ + + + ++ Q++ GL+++H ++++RD
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRD 314
Query: 130 LKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEYTAAIDIW 188
LKP N+LL+ +++I D GLA T+ Y T + APELLL EY ++D +
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEYDFSVDYF 373
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
++G L E++ A+ G R+ + ++L + R
Sbjct: 374 ALGVTLYEMI---------------------------AARGPFRARGEKVENKEL-KQRV 405
Query: 249 QQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEA 283
+ A +P+K S + D E +L DP KR+ +
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 19/196 (9%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIKDIIRPPK 73
++ VN+ T VA+KK+ D + + +EIK++ +HEN++ +
Sbjct: 47 VYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF----- 98
Query: 74 KDTFNDVYIVYELMDT----DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRD 129
+D+ +VY M D + L+ G+ ++H +HRD
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 158
Query: 130 LKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNCTEYTAAID 186
+K +N+LL+ + KI DFGLAR + ++T V T Y APE L E T D
Sbjct: 159 IKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG--EITPKSD 216
Query: 187 IWSVGCILGEIMTREP 202
I+S G +L EI+T P
Sbjct: 217 IYSFGVVLLEIITGLP 232
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++QL+ +F Q+ +G+ ++ S + +HRD+ N+LL KIGDFGLAR
Sbjct: 160 EEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR----- 214
Query: 158 DFM--TEYVV-------TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
D M + Y+V +W APE + +C YT D+WS G +L EI +
Sbjct: 215 DIMNDSNYIVKGNARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 263
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 75 DTFNDVYIVYELMDTD-----LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRD 129
+T D+ +V +M+ ++ + + + ++ Q++ GL+++H ++++RD
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRD 314
Query: 130 LKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEYTAAIDIW 188
LKP N+LL+ +++I D GLA T+ Y T + APELLL EY ++D +
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEYDFSVDYF 373
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
++G L E++ A+ G R+ + ++L + R
Sbjct: 374 ALGVTLYEMI---------------------------AARGPFRARGEKVENKEL-KQRV 405
Query: 249 QQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEA 283
+ A +P+K S + D E +L DP KR+ +
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 75 DTFNDVYIVYELMDTD-----LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRD 129
+T D+ +V +M+ ++ + + + ++ Q++ GL+++H ++++RD
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRD 314
Query: 130 LKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEYTAAIDIW 188
LKP N+LL+ +++I D GLA T+ Y T + APELLL EY ++D +
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEYDFSVDYF 373
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
++G L E++ A+ G R+ + ++L + R
Sbjct: 374 ALGVTLYEMI---------------------------AARGPFRARGEKVENKELKQ-RV 405
Query: 249 QQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEA 283
+ A +P+K S + D E +L DP KR+ +
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 75 DTFNDVYIVYELMDTD-----LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRD 129
+T D+ +V +M+ ++ + + + ++ Q++ GL+++H ++++RD
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRD 314
Query: 130 LKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEYTAAIDIW 188
LKP N+LL+ +++I D GLA T+ Y T + APELLL EY ++D +
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEYDFSVDYF 373
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
++G L E++ A+ G R+ + ++L + R
Sbjct: 374 ALGVTLYEMI---------------------------AARGPFRARGEKVENKEL-KQRV 405
Query: 249 QQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEA 283
+ A +P+K S + D E +L DP KR+ +
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 29/173 (16%)
Query: 48 LREIKLLRHM-EHENVIAIKDIIRPPKKDTFNDVYIVY-----------ELMDTDLHQII 95
+ E+K++ H+ +HEN++ + Y Y +++TD I
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 96 RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS 155
+ T D +F Q+ +G+ ++ S + +HRD+ N+LL KIGDFGLAR
Sbjct: 157 ANSTASTRD-LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--- 212
Query: 156 ETDFM--TEYVV-------TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
D M + Y+V +W APE + +C YT D+WS G +L EI +
Sbjct: 213 --DIMNDSNYIVKGNARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 261
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 34 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 82
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ +YIV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 137
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + + +W APE L +T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPEAALY-GRFTIK 195
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPG 218
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 7 GEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 65
G + + + + N T E VA+K + D R + EI +LR + HE++I
Sbjct: 42 GHFGKVSLYCYDP-TNDGTGEMVAVKAL--KADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 66 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 125
K + +V E + + + F Q+ G+ Y+H+
Sbjct: 99 KGCCEDAGAASLQ---LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHY 155
Query: 126 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR-------WYRAPELLLNC 178
+HRDL N+LL+ +KIGDFGLA+ E Y V WY APE L
Sbjct: 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH--EXYRVREDGDSPVFWY-APECLKEY 212
Query: 179 TEYTAAIDIWSVGCILGEIMT 199
Y A+ D+WS G L E++T
Sbjct: 213 KFYYAS-DVWSFGVTLYELLT 232
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 97/201 (48%), Gaps = 28/201 (13%)
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
+++ + DL ++ ++L ++H +++ ++ L Y+H +++RDLK N+LL++
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 142
Query: 141 CDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+K+ D+G+ + D + + T Y APE +L +Y ++D W++G ++ E+M
Sbjct: 143 GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMA 201
Query: 200 -REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK 258
R P +++GS D+ N Y+ Q+ ++ R P
Sbjct: 202 GRSPF--------------DIVGSSDNP------DQNTEDYLFQVILEKQ----IRIPRS 237
Query: 259 -SSGAVDLLEKMLVFDPNKRI 278
S A +L+ L DP +R+
Sbjct: 238 LSVKAASVLKSFLNKDPKERL 258
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 97/200 (48%), Gaps = 26/200 (13%)
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
+++ + DL ++ ++L ++H +++ ++ L Y+H +++RDLK N+LL++
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 157
Query: 141 CDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+K+ D+G+ + D + + T Y APE +L +Y ++D W++G ++ E+M
Sbjct: 158 GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMA 216
Query: 200 REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFP-NK 258
F +++GS D+ N Y+ Q+ KQ R P +
Sbjct: 217 GRSPF-------------DIVGSSDNP------DQNTEDYLFQVI-LEKQ---IRIPRSM 253
Query: 259 SSGAVDLLEKMLVFDPNKRI 278
S A +L+ L DP +R+
Sbjct: 254 SVKAASVLKSFLNKDPKERL 273
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 29/173 (16%)
Query: 48 LREIKLLRHM-EHENVIAIKDIIRPPKKDTFNDVYIVY-----------ELMDTDLHQII 95
+ E+K++ H+ +HEN++ + Y Y +++TD I
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 96 RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS 155
++ L+ +F Q+ +G+ ++ S + +HRD+ N+LL KIGDFGLAR
Sbjct: 157 -ANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--- 212
Query: 156 ETDFM--TEYVV-------TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
D M + Y+V +W APE + +C YT D+WS G +L EI +
Sbjct: 213 --DIMNDSNYIVKGNARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 261
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 96/200 (48%), Gaps = 26/200 (13%)
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
+++ + DL ++ ++L ++H +++ ++ L Y+H +++RDLK N+LL++
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 146
Query: 141 CDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+K+ D+G+ + D + + T Y APE +L +Y ++D W++G ++ E+M
Sbjct: 147 GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMA 205
Query: 200 REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK- 258
F +++GS D+ N Y+ Q+ KQ R P
Sbjct: 206 GRSPF-------------DIVGSSDNP------DQNTEDYLFQV-ILEKQ---IRIPRSL 242
Query: 259 SSGAVDLLEKMLVFDPNKRI 278
S A +L+ L DP +R+
Sbjct: 243 SVKAASVLKSFLNKDPKERL 262
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 15/200 (7%)
Query: 14 FFIFSAAVNSETREEVAIKKIGNAFDNIID---------ARRTLREIKLLRHMEHENVIA 64
F AV+ E +EV +K I + +++ + TL EI +L +EH N+I
Sbjct: 37 FGFVWTAVDKEKNKEVVVKFIKK--EKVLEDCWIEDPKLGKVTL-EIAILSRVEHANIIK 93
Query: 65 IKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 124
+ DI + F + + DL I +L + Y QL+ + Y+
Sbjct: 94 VLDIF---ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 125 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 184
++HRD+K N+++ +K+ DFG A + T Y APE+L+
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPE 210
Query: 185 IDIWSVGCILGEIMTREPLF 204
+++WS+G L ++ E F
Sbjct: 211 LEMWSLGVTLYTLVFEENPF 230
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 96/200 (48%), Gaps = 26/200 (13%)
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
+++ + DL ++ ++L ++H +++ ++ L Y+H +++RDLK N+LL++
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 189
Query: 141 CDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+K+ D+G+ + D + + T Y APE +L +Y ++D W++G ++ E+M
Sbjct: 190 GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMA 248
Query: 200 REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK- 258
F +++GS D+ N Y+ Q+ ++ R P
Sbjct: 249 GRSPF-------------DIVGSSDNP------DQNTEDYLFQVILEKQ----IRIPRSL 285
Query: 259 SSGAVDLLEKMLVFDPNKRI 278
S A +L+ L DP +R+
Sbjct: 286 SVKAASVLKSFLNKDPKERL 305
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 19/127 (14%)
Query: 106 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD------- 158
C + Q+ ++++HS ++HRDLKPSN+ +K+GDFGL + +
Sbjct: 120 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 159 ------FMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ 212
T V T+ Y +PE ++ Y+ +DI+S+G IL E+ L+P + +
Sbjct: 180 PMPAYARHTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFEL-----LYPFSTQMER 233
Query: 213 LRLITEL 219
+R +T++
Sbjct: 234 VRTLTDV 240
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+GE+ D++ + +VA+K I N A+ L E ++ + H N++ +
Sbjct: 22 KGEFGDVMLGDYRG-------NKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 70
Query: 66 KDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQ--LTDDHCQYFLYQLLRGLKYVHS 122
+I K +YIV E M L +RS + L D F + ++Y+
Sbjct: 71 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 123 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 182
+ +HRDL N+L++ K+ DFGL + S T T + +W APE L ++
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKW-TAPEALREAA-FS 183
Query: 183 AAIDIWSVGCILGEIMTRE----PLFPGKDYV 210
D+WS G +L EI + P P KD V
Sbjct: 184 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 215
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQ 107
LRE+ +++ + H N++ + P + Y+ + LH+ + +QL +
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRL 140
Query: 108 YFLYQLLRGLKYVHSAS--VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV 165
Y + +G+ Y+H+ + ++HR+LK NLL++ +K+ DFGL+R + T ++
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA 200
Query: 166 -TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + APE+L + + D++S G IL E+ T
Sbjct: 201 GTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+GE+ D++ + +VA+K I N A+ L E ++ + H N++ +
Sbjct: 31 KGEFGDVMLGDYRG-------NKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 66 KDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQ--LTDDHCQYFLYQLLRGLKYVHS 122
+I K +YIV E M L +RS + L D F + ++Y+
Sbjct: 80 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 123 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 182
+ +HRDL N+L++ K+ DFGL + S T T + +W APE L +++
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKW-TAPEALRE-KKFS 192
Query: 183 AAIDIWSVGCILGEIMTRE----PLFPGKDYV 210
D+WS G +L EI + P P KD V
Sbjct: 193 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 224
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD 88
VAIK + + R L E ++ +H N+I ++ ++ + Y+ +D
Sbjct: 80 VAIKALKAGYTER-QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 89 TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDF 148
T L D Q T L + G++Y+ +HRDL N+L++++ K+ DF
Sbjct: 139 TFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDF 195
Query: 149 GLARTTSETDFMTEYVVT------RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
GL+R E D Y T RW APE + T +++A D+WS G ++ E++
Sbjct: 196 GLSRVL-EDDPDAAYTTTGGKIPIRW-TAPEAIAFRT-FSSASDVWSFGVVMWEVLA 249
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 48 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQ 107
LRE+ +++ + H N++ + P + Y+ + LH+ + +QL +
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRL 140
Query: 108 YFLYQLLRGLKYVHS--ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV 165
Y + +G+ Y+H+ ++HRDLK NLL++ +K+ DFGL+R + ++
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA 200
Query: 166 -TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + APE+L + + D++S G IL E+ T
Sbjct: 201 GTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+GE+ D++ + +VA+K I N A+ L E ++ + H N++ +
Sbjct: 203 KGEFGDVMLGDYRG-------NKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 66 KDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQ--LTDDHCQYFLYQLLRGLKYVHS 122
+I K +YIV E M L +RS + L D F + ++Y+
Sbjct: 252 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 123 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 182
+ +HRDL N+L++ K+ DFGL + S T T + +W APE L +++
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKW-TAPEALRE-KKFS 364
Query: 183 AAIDIWSVGCILGEIMTRE----PLFPGKDYV 210
D+WS G +L EI + P P KD V
Sbjct: 365 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 396
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 48 LREIKLLRHM-EHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDH- 105
+ E+K++ H+ +HEN++ + Y Y + L + +D D
Sbjct: 89 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP 148
Query: 106 -----CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 160
+F Q+ +G+ ++ S + +HRD+ N+LL KIGDFGLAR D M
Sbjct: 149 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIM 203
Query: 161 --TEYVV-------TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ Y+V +W APE + +C YT D+WS G +L EI +
Sbjct: 204 NDSNYIVKGNARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 249
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+GE+ D++ + +VA+K I N A+ L E ++ + H N++ +
Sbjct: 16 KGEFGDVMLGDYRG-------NKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 64
Query: 66 KDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQ--LTDDHCQYFLYQLLRGLKYVHS 122
+I K +YIV E M L +RS + L D F + ++Y+
Sbjct: 65 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 123 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 182
+ +HRDL N+L++ K+ DFGL + S T T + +W APE L +++
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKW-TAPEALRE-KKFS 177
Query: 183 AAIDIWSVGCILGEIMTRE----PLFPGKDYV 210
D+WS G +L EI + P P KD V
Sbjct: 178 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 209
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 19/196 (9%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIKDIIRPPK 73
++ VN+ T VA+KK+ D + + +EIK++ +HEN++ +
Sbjct: 41 VYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF----- 92
Query: 74 KDTFNDVYIVYELMDT----DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRD 129
+D+ +VY M D + L+ G+ ++H +HRD
Sbjct: 93 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 152
Query: 130 LKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNCTEYTAAID 186
+K +N+LL+ + KI DFGLAR + ++ V T Y APE L E T D
Sbjct: 153 IKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG--EITPKSD 210
Query: 187 IWSVGCILGEIMTREP 202
I+S G +L EI+T P
Sbjct: 211 IYSFGVVLLEIITGLP 226
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 37 RGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 95
Query: 65 IKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQ------------LTDDHCQYFLY 111
+ P + ++ E +L +RS + LT +H + +
Sbjct: 96 LLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTE---YVVTR 167
Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++ + + +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
W APE + + YT D+WS G +L EI +
Sbjct: 212 WM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 241
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 36/234 (15%)
Query: 78 NDVYIVYELMDTDLHQIIRSDQQLTDDHC-QYFLYQL----LRGLKYV-HSASVLHRDLK 131
D +I ELM T + + + DD + L ++ ++ L ++ + ++HRD+K
Sbjct: 94 GDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIK 153
Query: 132 PSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL---LNCTEYTAAIDIW 188
PSN+LL+ S ++K+ DFG++ ++ T R Y APE + + Y D+W
Sbjct: 154 PSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVW 213
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELI-GSPDDASLGFLRSDNARRYVRQLPRCR 247
S+G L E+ T FP + +T+++ G P QL
Sbjct: 214 SLGITLYELATGR--FPYPKWNSVFDQLTQVVKGDPP-----------------QLSNSE 254
Query: 248 KQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVC 301
+++F+ F ++ + L D +KR +E L+HP++ + E C
Sbjct: 255 EREFSPSF-------INFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVAC 301
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 48 LREIKLLRHM-EHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDH- 105
+ E+K++ H+ +HEN++ + Y Y + L + +D D
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP 156
Query: 106 -----CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 160
+F Q+ +G+ ++ S + +HRD+ N+LL KIGDFGLAR D M
Sbjct: 157 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIM 211
Query: 161 --TEYVV-------TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ Y+V +W APE + +C YT D+WS G +L EI +
Sbjct: 212 NDSNYIVKGNARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 257
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 20/189 (10%)
Query: 21 VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV 80
+ T VA+K++ ++ + R REI++L+ + + ++ + + P + +
Sbjct: 34 LGDNTGALVAVKQLQHSGPD--QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR-- 89
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLN 138
+V E + + + + D + LY Q+ +G++Y+ S +HRDL N+L+
Sbjct: 90 -LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 148
Query: 139 ASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRAPELLLNCTEYTAAIDIWSV 190
+ +KI DFGLA+ +Y V R WY APE L + ++ D+WS
Sbjct: 149 SEAHVKIADFGLAKLLP---LDKDYYVVREPGQSPIFWY-APESLSD-NIFSRQSDVWSF 203
Query: 191 GCILGEIMT 199
G +L E+ T
Sbjct: 204 GVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 20/189 (10%)
Query: 21 VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV 80
+ T VA+K++ ++ + R REI++L+ + + ++ + + P + +
Sbjct: 35 LGDNTGALVAVKQLQHSGPD--QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR-- 90
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLN 138
+V E + + + + D + LY Q+ +G++Y+ S +HRDL N+L+
Sbjct: 91 -LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 149
Query: 139 ASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRAPELLLNCTEYTAAIDIWSV 190
+ +KI DFGLA+ +Y V R WY APE L + ++ D+WS
Sbjct: 150 SEAHVKIADFGLAKLLP---LDKDYYVVREPGQSPIFWY-APESLSD-NIFSRQSDVWSF 204
Query: 191 GCILGEIMT 199
G +L E+ T
Sbjct: 205 GVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 20/189 (10%)
Query: 21 VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV 80
+ T VA+K++ ++ + R REI++L+ + + ++ + + P + +
Sbjct: 47 LGDNTGALVAVKQLQHSGPD--QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR-- 102
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLN 138
+V E + + + + D + LY Q+ +G++Y+ S +HRDL N+L+
Sbjct: 103 -LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 161
Query: 139 ASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRAPELLLNCTEYTAAIDIWSV 190
+ +KI DFGLA+ +Y V R WY APE L + ++ D+WS
Sbjct: 162 SEAHVKIADFGLAKLLP---LDKDYYVVREPGQSPIFWY-APESLSD-NIFSRQSDVWSF 216
Query: 191 GCILGEIMT 199
G +L E+ T
Sbjct: 217 GVVLYELFT 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 19/127 (14%)
Query: 106 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF------ 159
C + Q+ ++++HS ++HRDLKPSN+ +K+GDFGL + +
Sbjct: 166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 160 -MTEY------VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ 212
M Y V T+ Y +PE ++ Y+ +DI+S+G IL E+ L+ + +
Sbjct: 226 PMPAYATHXGQVGTKLYMSPE-QIHGNNYSHKVDIFSLGLILFEL-----LYSFSTQMER 279
Query: 213 LRLITEL 219
+R+IT++
Sbjct: 280 VRIITDV 286
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 37 RGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 95
Query: 65 IKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQ------------LTDDHCQYFLY 111
+ P + ++ E +L +RS + LT +H + +
Sbjct: 96 LLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTE---YVVTR 167
Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++ + + +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
W APE + + YT D+WS G +L EI +
Sbjct: 212 WM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 241
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--- 165
F YQ+ +G+ ++ S + +HRDL N+LL KI DFGLAR + YVV
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGN 224
Query: 166 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+W APE + NC YT D+WS G L E+ +
Sbjct: 225 ARLPVKW-MAPESIFNCV-YTFESDVWSYGIFLWELFS 260
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++ LT F +Q+ +G++Y+ S++HRDL N+L+ +KI DFGL+R E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 158 DFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
D + + +W L + YT D+WS G +L EI+T
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--- 165
F YQ+ +G+ ++ S + +HRDL N+LL KI DFGLAR + YVV
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGN 222
Query: 166 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+W APE + NC YT D+WS G L E+ +
Sbjct: 223 ARLPVKW-MAPESIFNCV-YTFESDVWSYGIFLWELFS 258
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRW 168
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 169 YRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG----S 222
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G S
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGYLS 233
Query: 223 PDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 270
PD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 234 PD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 279
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRW 168
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 114 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 169 YRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG----S 222
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G S
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGYLS 230
Query: 223 PDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 270
PD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 231 PD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 276
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--- 165
F YQ+ +G+ ++ S + +HRDL N+LL KI DFGLAR + YVV
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGN 229
Query: 166 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+W APE + NC YT D+WS G L E+ +
Sbjct: 230 ARLPVKW-MAPESIFNCV-YTFESDVWSYGIFLWELFS 265
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 20/171 (11%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA----RTTSETDFMTEYVVTR 167
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA R + F
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 191
Query: 168 WYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG---- 221
W APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 192 WM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGYL 247
Query: 222 SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 270
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 248 SPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 294
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEYVV 165
+F Q+ +G+ ++ S + +HRD+ N+LL KIGDFGLAR D M + Y+V
Sbjct: 162 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNYIV 216
Query: 166 -------TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+W APE + +C YT D+WS G +L EI +
Sbjct: 217 KGNARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 255
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRW 168
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 169 YRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG----S 222
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G S
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGYLS 255
Query: 223 PDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 270
PD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 256 PD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 301
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E M + S+ + + +++ +++ L +HS ++HRD+KP N+LL+
Sbjct: 150 LYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK 209
Query: 140 SCDLKIGDFGLARTTSETDFM--TEYVVTRWYRAPELLLNCTE---YTAAIDIWSVGCIL 194
LK+ DFG ET + V T Y +PE+L + Y D WSVG L
Sbjct: 210 HGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 269
Query: 195 GEIMTREPLFPGKDYVHQLRLITELIGS---PDDASL 228
E++ + F V I + S P+DA +
Sbjct: 270 FEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEI 306
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRW 168
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 169 YRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG----S 222
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G S
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGYLS 233
Query: 223 PDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 270
PD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 234 PD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 279
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--- 165
F YQ+ +G+ ++ S + +HRDL N+LL KI DFGLAR + YVV
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKND---SNYVVKGN 229
Query: 166 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+W APE + NC YT D+WS G L E+ +
Sbjct: 230 ARLPVKW-MAPESIFNCV-YTFESDVWSYGIFLWELFS 265
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRW 168
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 169 YRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG----S 222
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G S
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGYLS 256
Query: 223 PDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 270
PD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 257 PD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 302
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRW 168
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 169 YRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG----S 222
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G S
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGYLS 228
Query: 223 PDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 270
PD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 229 PD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 274
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--- 165
F YQ+ +G+ ++ S + +HRDL N+LL KI DFGLAR + YVV
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGN 206
Query: 166 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+W APE + NC YT D+WS G L E+ +
Sbjct: 207 ARLPVKW-MAPESIFNCV-YTFESDVWSYGIFLWELFS 242
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRW 168
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 169 YRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG----S 222
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G S
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGYLS 228
Query: 223 PDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 270
PD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 229 PD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 274
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 116 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAP 172
G+ ++H +HRD+K +N+LL+ + KI DFGLAR + ++ + V T Y AP
Sbjct: 136 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 173 ELLLNCTEYTAAIDIWSVGCILGEIMTREP 202
E L E T DI+S G +L EI+T P
Sbjct: 196 EALRG--EITPKSDIYSFGVVLLEIITGLP 223
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + A ++ + L E +++ +V+ +
Sbjct: 35 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL 93
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + +++ ++
Sbjct: 94 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+ + + RW
Sbjct: 149 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 207
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 208 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 264
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + A ++ + L E +++ +V+ +
Sbjct: 26 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL 84
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + +++ ++
Sbjct: 85 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+ + + RW
Sbjct: 140 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 198
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 199 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 255
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + A ++ + L E +++ +V+ +
Sbjct: 22 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL 80
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + +++ ++
Sbjct: 81 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+ + + RW
Sbjct: 136 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 194
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 195 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 251
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 20/171 (11%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA----RTTSETDFMTEYVVTR 167
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA R + F
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 171
Query: 168 WYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG---- 221
W APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 172 WM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGYL 227
Query: 222 SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 270
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 228 SPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 274
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 20/171 (11%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA----RTTSETDFMTEYVVTR 167
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA R + F
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 168 WYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG---- 221
W APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 200 WM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGYL 255
Query: 222 SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 270
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 256 SPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 302
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + A ++ + L E +++ +V+ +
Sbjct: 28 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL 86
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + +++ ++
Sbjct: 87 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+ + + RW
Sbjct: 142 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 200
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 201 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 257
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + A ++ + L E +++ +V+ +
Sbjct: 29 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL 87
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + +++ ++
Sbjct: 88 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+ + + RW
Sbjct: 143 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 201
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 202 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 258
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + A ++ + L E +++ +V+ +
Sbjct: 28 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL 86
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + +++ ++
Sbjct: 87 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+ + + RW
Sbjct: 142 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 200
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 201 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 257
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + A ++ + L E +++ +V+ +
Sbjct: 57 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL 115
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + +++ ++
Sbjct: 116 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+ + + RW
Sbjct: 171 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 229
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 230 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 286
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + A ++ + L E +++ +V+ +
Sbjct: 35 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL 93
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + ++ ++
Sbjct: 94 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+ + + RW
Sbjct: 149 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 207
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 208 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 264
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N T+ VAIK + + L E ++++ ++H+ ++ + ++
Sbjct: 25 VWMGTWNGNTK--VAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQLYAVV------ 73
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKP 132
+ +YIV E M+ L ++ + L + Q+ G+ Y+ + +HRDL+
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRS 133
Query: 133 SNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAAIDIWS 189
+N+L+ KI DFGLAR + + +W APE L +T D+WS
Sbjct: 134 ANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW-TAPEAAL-YGRFTIKSDVWS 191
Query: 190 VGCILGEIMTREPL-FPGKD 208
G +L E++T+ + +PG +
Sbjct: 192 FGILLTELVTKGRVPYPGMN 211
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 82/297 (27%)
Query: 22 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 81
N T+E+ A+K + D + RE++L H I I+ D + ++Y
Sbjct: 39 NKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLY 84
Query: 82 -------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLK 131
IV E +D +L I R DQ T+ + + ++Y+HS ++ HRD+K
Sbjct: 85 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 144
Query: 132 PSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
P NLL + + LK+ DFG A+ T+ +Y + D+W
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETT----------------------GEKYDKSCDMW 182
Query: 189 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 248
S+G I+ ++ P F H L + SP + R R
Sbjct: 183 SLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-----------------RIRM 216
Query: 249 QQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 300
Q+ FPN V L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 217 GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 271
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 80 VYIVYELMDTD-LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
V I EL++ L Q+++ L +D Y+L Q L GL+Y+HS +LH D+K N+LL+
Sbjct: 160 VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 219
Query: 139 ------ASCDLK----IGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
A CD + GL ++ D++ T + APE++L A +D+W
Sbjct: 220 SDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG---TETHMAPEVVLG-RSCDAKVDVW 275
Query: 189 SVGCIL 194
S C++
Sbjct: 276 SSCCMM 281
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 37 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 95
Query: 65 IKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLTDDHC 106
+ P F ++ ++ Y++ DL++ LT +H
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LTLEHL 150
Query: 107 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTE--- 162
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++ +
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 163 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ +W APE + + YT D+WS G +L EI +
Sbjct: 211 RLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 245
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + A ++ + L E +++ +V+ +
Sbjct: 25 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL 83
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + ++ ++
Sbjct: 84 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+ + + RW
Sbjct: 139 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 197
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 198 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 254
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 30/203 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD 75
++ N TR VAIK + + L+E ++++ + HE ++ + ++
Sbjct: 24 VWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV------ 72
Query: 76 TFNDVYIVYELMD-TDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKYVHSASVLH 127
+ + IV E M L ++ + QL D Q+ G+ YV + +H
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAYVERMNYVH 127
Query: 128 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAA 184
RDL+ +N+L+ + K+ DFGLAR + + +W APE L +T
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPEAALY-GRFTIK 185
Query: 185 IDIWSVGCILGEIMTREPL-FPG 206
D+WS G +L E+ T+ + +PG
Sbjct: 186 SDVWSFGILLTELTTKGRVPYPG 208
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 39 RGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 97
Query: 65 IKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQ--------------LTDDHCQYF 109
+ P + ++ E +L +RS + LT +H +
Sbjct: 98 LLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 110 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW- 168
+Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + R
Sbjct: 154 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 169 --YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ APE + + YT D+WS G +L EI +
Sbjct: 214 LKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 28 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 86
Query: 65 IKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLTDDHC 106
+ P F ++ ++ Y++ DL++ LT +H
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LTLEHL 141
Query: 107 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTE--- 162
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++ +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 163 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ +W APE + + YT D+WS G +L EI +
Sbjct: 202 RLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 28 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 86
Query: 65 IKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLTDDHC 106
+ P F ++ ++ Y++ DL++ LT +H
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LTLEHL 141
Query: 107 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTE--- 162
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++ +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 163 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ +W APE + + YT D+WS G +L EI +
Sbjct: 202 RLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 74 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 132
Query: 65 IKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLTDDHC 106
+ P F ++ ++ Y++ DL++ LT +H
Sbjct: 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LTLEHL 187
Query: 107 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTE--- 162
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++ +
Sbjct: 188 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 163 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ +W APE + + YT D+WS G +L EI +
Sbjct: 248 RLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 282
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + A ++ + L E +++ +V+ +
Sbjct: 29 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL 87
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + +++ ++
Sbjct: 88 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD + + RW
Sbjct: 143 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM- 201
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 202 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 258
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
RG + ++ FS + ++ VA+K + A+ L+E ++L+ H N++ +
Sbjct: 124 RGNFGEV----FSGRLRADN-TLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRL 177
Query: 66 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSA 123
+ + +YIV EL+ D +R++ +L + G++Y+ S
Sbjct: 178 IGVCTQKQP-----IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 124 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYRAPELLLNCT 179
+HRDL N L+ LKI DFG++R ++ + V +W APE LN
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW-TAPE-ALNYG 290
Query: 180 EYTAAIDIWSVGCILGEIMT 199
Y++ D+WS G +L E +
Sbjct: 291 RYSSESDVWSFGILLWETFS 310
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 47/206 (22%)
Query: 28 EVAIKKIGNAFDNIIDARRTLREIKLLRHM-EHENVIAIKDIIRPPKKDTFNDVYIVYEL 86
+VA+K + D+ + + E+K++ + HEN++ + +Y+++E
Sbjct: 77 QVAVKMLKEKADSS-EREALMSELKMMTQLGSHENIVNLLGACTLS-----GPIYLIFEY 130
Query: 87 M-DTDLHQIIRSD-QQLTDDHCQY----------------------FLYQLLRGLKYVHS 122
DL +RS ++ ++D +Y F YQ+ +G++++
Sbjct: 131 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190
Query: 123 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE--YVV-------TRWYRAPE 173
S +HRDL N+L+ +KI DFGLAR D M++ YVV +W APE
Sbjct: 191 KSCVHRDLAARNVLVTHGKVVKICDFGLAR-----DIMSDSNYVVRGNARLPVKW-MAPE 244
Query: 174 LLLNCTEYTAAIDIWSVGCILGEIMT 199
L YT D+WS G +L EI +
Sbjct: 245 SLFEGI-YTIKSDVWSYGILLWEIFS 269
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + N ++ + L E +++ +V+ +
Sbjct: 20 QGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCHHVVRL 78
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + +++ ++
Sbjct: 79 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD + + RW
Sbjct: 134 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM- 192
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 193 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 249
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 43 DARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLT 102
+ + + E ++++++H +++ + II ++Y EL H + R+ L
Sbjct: 68 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLK 123
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 162
+ Q+ + + Y+ S + +HRD+ N+L+ + +K+GDFGL+R + D+
Sbjct: 124 VLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 183
Query: 163 YVV---TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLF 204
V +W +PE +N +T A D+W + EI++ ++P F
Sbjct: 184 SVTRLPIKW-MSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 80 VYIVYELMDTD-LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
V I EL++ L Q+++ L +D Y+L Q L GL+Y+HS +LH D+K N+LL+
Sbjct: 141 VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 200
Query: 139 A-SCDLKIGDFGLARTTSE----TDFMT-EYV-VTRWYRAPELLLNCTEYTAAIDIWSVG 191
+ + DFG A D +T +Y+ T + APE++L A +D+WS
Sbjct: 201 SDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG-RSCDAKVDVWSSC 259
Query: 192 CIL 194
C++
Sbjct: 260 CMM 262
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 43 DARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLT 102
+ + + E ++++++H +++ + II ++Y EL H + R+ L
Sbjct: 56 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLK 111
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 162
+ Q+ + + Y+ S + +HRD+ N+L+ + +K+GDFGL+R + D+
Sbjct: 112 VLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171
Query: 163 YVV---TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLF 204
V +W +PE +N +T A D+W + EI++ ++P F
Sbjct: 172 SVTRLPIKW-MSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD 88
VAIK + + R L E ++ +H N+I ++ ++ + Y+ +D
Sbjct: 80 VAIKALKAGYTER-QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 89 TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDF 148
T L D Q T L + G++Y+ +HRDL N+L++++ K+ DF
Sbjct: 139 TFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDF 195
Query: 149 GLARTT-----SETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
GL+R + + RW APE + T +++A D+WS G ++ E++
Sbjct: 196 GLSRVLEDDPDAAXTTTGGKIPIRW-TAPEAIAFRT-FSSASDVWSFGVVMWEVLA 249
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ 107
REI++ H+ H N++ + + ++ +Y++ E +L++ ++ +
Sbjct: 72 REIEIQAHLHHPNILRLYNYFYDRRR-----IYLILEYAPRGELYKELQKSCTFDEQRTA 126
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR 167
+ +L L Y H V+HRD+KP NLLL +LKI DFG + T T
Sbjct: 127 TIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT-MCGTL 185
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDAS 227
Y PE++ + +D+W +G + E++ P F + R I ++
Sbjct: 186 DYLPPEMI-EGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV-------- 236
Query: 228 LGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 287
+F P +GA DL+ K+L +P++R+ + + HP
Sbjct: 237 --------------------DLKFPASVP---TGAQDLISKLLRHNPSERLPLAQVSAHP 273
Query: 288 YLQS 291
++++
Sbjct: 274 WVRA 277
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 29 VAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENVIAIKDIIRPPKKDTFNDVYI 82
VAIK + + + + + R E+ LL+ + VI + D P D+F +
Sbjct: 36 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP--DSF---VL 90
Query: 83 VYELMD--TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS 140
+ E M+ DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ +
Sbjct: 91 ILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN 150
Query: 141 -CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
+LK+ DFG +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 151 RGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 204
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 43 DARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLT 102
+ + + E ++++++H +++ + II ++Y EL H + R+ L
Sbjct: 52 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLK 107
Query: 103 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 162
+ Q+ + + Y+ S + +HRD+ N+L+ + +K+GDFGL+R + D+
Sbjct: 108 VLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 167
Query: 163 YVV---TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLF 204
V +W +PE +N +T A D+W + EI++ ++P F
Sbjct: 168 SVTRLPIKW-MSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSE---TDFMTEYVVTRW 168
Q +G+ Y+H+ +++HRD+K +N+ L+ +KIGDFGLA S + + + +
Sbjct: 140 QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
Query: 169 YRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTRE 201
+ APE+ + + ++ D++S G +L E+MT E
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++ LT F +Q+ +G++Y+ ++HRDL N+L+ +KI DFGL+R E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 158 DFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
D + + +W L + YT D+WS G +L EI+T
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 98 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 157
++ LT F +Q+ +G++Y+ ++HRDL N+L+ +KI DFGL+R E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 158 DFMTEYVVTRWYRAPELLLNCTE-----YTAAIDIWSVGCILGEIMT 199
D YV R P + YT D+WS G +L EI+T
Sbjct: 204 D---SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 107/235 (45%), Gaps = 35/235 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR-HMEHENVIAIKDIIRPPKK 74
+F A +T + VAIK + + + + R R +LR ++H NV+ + ++ K
Sbjct: 47 LFGPAPGEQT-QAVAIKTLKDKAEGPL--REEFRHEAMLRARLQHPNVVCLLGVV---TK 100
Query: 75 DTFNDVYIVYELMDTDLHQII-----RSDQQLTDDH-----------CQYFLYQLLRGLK 118
D + Y DLH+ + SD TDD + + Q+ G++
Sbjct: 101 DQPLSMIFSY-CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 159
Query: 119 YVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM----TEYVVTRWYRAPEL 174
Y+ S V+H+DL N+L+ ++KI D GL R D+ + RW APE
Sbjct: 160 YLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWM-APEA 218
Query: 175 LLNCTEYTAAIDIWSVGCILGEIMTR--EPL--FPGKDYVHQLRLITELIGSPDD 225
++ +++ DIWS G +L E+ + +P + +D V +R +++ PDD
Sbjct: 219 IMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR-NRQVLPCPDD 271
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 26/238 (10%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
+G + + + V E VAIK + A ++ + L E +++ +V+ +
Sbjct: 22 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL 80
Query: 66 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH----------CQYFLYQLL 114
++ + ++ ELM DL +RS + +++ ++
Sbjct: 81 LGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 115 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYR 170
G+ Y+++ +HRDL N + +KIGDFG+ R ETD+ + + RW
Sbjct: 136 DGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 194
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITE--LIGSPDD 225
+PE L + +T D+WS G +L EI T E + G LR + E L+ PD+
Sbjct: 195 SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 251
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 39 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 97
Query: 65 IKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQ----------------LTDDHCQ 107
+ P + ++ E +L +RS + LT +H
Sbjct: 98 LLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 108 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTE---Y 163
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++ +
Sbjct: 154 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 164 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ +W APE + + YT D+WS G +L EI +
Sbjct: 214 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 247
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 37 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 95
Query: 65 IKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLTDDHC 106
+ P F ++ ++ Y++ DL++ LT +H
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LTLEHL 150
Query: 107 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT 166
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR +
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 167 RW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
R + APE + + YT D+WS G +L EI +
Sbjct: 211 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 245
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 9/187 (4%)
Query: 30 AIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMD 88
A+K+ + F D R L E+ HE V +R + + +Y+ EL
Sbjct: 86 AVKRSMSPFRGPKDRARKLAEVG-----SHEKVGQHPCCVRLEQAWEEGGILYLQTELCG 140
Query: 89 TDLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGD 147
L Q + L + +L L L ++HS ++H D+KP+N+ L K+GD
Sbjct: 141 PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGD 200
Query: 148 FGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGK 207
FGL Y APELL Y A D++S+G + E+ L G
Sbjct: 201 FGLLVELGTAGAGEVQEGDPRYMAPELLQG--SYGTAADVFSLGLTILEVACNMELPHGG 258
Query: 208 DYVHQLR 214
+ QLR
Sbjct: 259 EGWQQLR 265
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI--IRPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + + PP YIV E
Sbjct: 60 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPP-------FYIVTEY 109
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + +++T Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 110 MPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVV 169
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L T ++ D+W+ G +L EI T
Sbjct: 170 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNT-FSIKSDVWAFGVLLWEIATY 227
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 228 GMSP-YPGID 236
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 107/235 (45%), Gaps = 35/235 (14%)
Query: 16 IFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR-HMEHENVIAIKDIIRPPKK 74
+F A +T + VAIK + + + + R R +LR ++H NV+ + ++ K
Sbjct: 30 LFGPAPGEQT-QAVAIKTLKDKAEGPL--REEFRHEAMLRARLQHPNVVCLLGVV---TK 83
Query: 75 DTFNDVYIVYELMDTDLHQII-----RSDQQLTDDH-----------CQYFLYQLLRGLK 118
D + Y DLH+ + SD TDD + + Q+ G++
Sbjct: 84 DQPLSMIFSY-CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 142
Query: 119 YVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM----TEYVVTRWYRAPEL 174
Y+ S V+H+DL N+L+ ++KI D GL R D+ + RW APE
Sbjct: 143 YLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWM-APEA 201
Query: 175 LLNCTEYTAAIDIWSVGCILGEIMTR--EPL--FPGKDYVHQLRLITELIGSPDD 225
++ +++ DIWS G +L E+ + +P + +D V +R +++ PDD
Sbjct: 202 IMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR-NRQVLPCPDD 254
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 28 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 86
Query: 65 IKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLTDDHC 106
+ P F ++ ++ Y++ DL++ LT +H
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LTLEHL 141
Query: 107 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT 166
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 167 RW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
R + APE + + YT D+WS G +L EI +
Sbjct: 202 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 28 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 86
Query: 65 IKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLTDDHC 106
+ P F ++ ++ Y++ DL++ LT +H
Sbjct: 87 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LTLEHL 141
Query: 107 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT 166
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 167 RW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
R + APE + + YT D+WS G +L EI +
Sbjct: 202 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 236
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKD 208
G +T + T++ TR Y PE + + + +WS+G +L +++ + F +
Sbjct: 156 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 209 YVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEK 268
E+IG + + RQ SS L+
Sbjct: 215 ---------EIIG--------------GQVFFRQ--------------RVSSECQHLIRW 237
Query: 269 MLVFDPNKRITVEEALRHPYLQSL 292
L P+ R T EE HP++Q +
Sbjct: 238 CLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 37 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 95
Query: 65 IKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLTDDHC 106
+ P F ++ ++ Y++ DL++ LT +H
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LTLEHL 150
Query: 107 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT 166
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR +
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 167 RW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
R + APE + + YT D+WS G +L EI +
Sbjct: 211 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 64
RG + +I + T VA+K + + + R + E+K+L H+ H NV+
Sbjct: 38 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVN 96
Query: 65 IKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQ---------------LTDDHCQY 108
+ P + ++ E +L +RS + LT +H
Sbjct: 97 LLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW 168
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 169 ---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ APE + + YT D+WS G +L EI +
Sbjct: 213 PLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 245
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKD 208
G +T + T++ TR Y PE + + + +WS+G +L +++ + F +
Sbjct: 188 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 209 YVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEK 268
E+IG + + RQ SS L+
Sbjct: 247 ---------EIIG--------------GQVFFRQ--------------RVSSECQHLIRW 269
Query: 269 MLVFDPNKRITVEEALRHPYLQSL 292
L P+ R T EE HP++Q +
Sbjct: 270 CLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKD 208
G +T + T++ TR Y PE + + + +WS+G +L +++ + F +
Sbjct: 189 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 209 YVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEK 268
E+IG + + RQ SS L+
Sbjct: 248 ---------EIIG--------------GQVFFRQ--------------RVSSECQHLIRW 270
Query: 269 MLVFDPNKRITVEEALRHPYLQSL 292
L P+ R T EE HP++Q +
Sbjct: 271 CLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKD 208
G +T + T++ TR Y PE + + + +WS+G +L +++ + F +
Sbjct: 189 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 209 YVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEK 268
E+IG + + RQ SS L+
Sbjct: 248 ---------EIIG--------------GQVFFRQ--------------RVSSECQHLIRW 270
Query: 269 MLVFDPNKRITVEEALRHPYLQSL 292
L P+ R T EE HP++Q +
Sbjct: 271 CLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKD 208
G +T + T++ TR Y PE + + + +WS+G +L +++ + F +
Sbjct: 188 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 209 YVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEK 268
E+IG + + RQ SS L+
Sbjct: 247 ---------EIIG--------------GQVFFRQ--------------RVSSECQHLIRW 269
Query: 269 MLVFDPNKRITVEEALRHPYLQSL 292
L P+ R T EE HP++Q +
Sbjct: 270 CLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 28 EVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM 87
+VAIK + + D +RE +++ +++ ++ + + + + +V E+
Sbjct: 39 DVAIKVLKQGTEKA-DTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEMA 91
Query: 88 DTD-LHQ-IIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKI 145
LH+ ++ +++ + L+Q+ G+KY+ + +HRDL N+LL KI
Sbjct: 92 GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKI 151
Query: 146 GDFGLARTTSETD-FMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
DFGL++ D + T +W + APE +N ++++ D+WS G + E ++
Sbjct: 152 SDFGLSKALGADDSYYTARSAGKWPLKWYAPE-CINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 6 RGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 65
RG + ++ FS + ++ VA+K + A+ L+E ++L+ H N++ +
Sbjct: 124 RGNFGEV----FSGRLRADN-TLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRL 177
Query: 66 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSA 123
+ + +YIV EL+ D +R++ +L + G++Y+ S
Sbjct: 178 IGVCTQKQP-----IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 124 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSE----TDFMTEYVVTRWYRAPELLLNCT 179
+HRDL N L+ LKI DFG++R ++ V +W APE LN
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW-TAPE-ALNYG 290
Query: 180 EYTAAIDIWSVGCILGEIMT 199
Y++ D+WS G +L E +
Sbjct: 291 RYSSESDVWSFGILLWETFS 310
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 39 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 88
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q+++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 89 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 148
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 149 KVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 206
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 207 GMSP-YPGID 215
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 80 VYIVYELMDTD-LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
V I EL++ L Q+I+ L +D Y+L Q L GL+Y+H+ +LH D+K N+LL+
Sbjct: 141 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 200
Query: 139 ------ASCD----LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
A CD L + GL ++ D++ T + APE+++ A +DIW
Sbjct: 201 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG---TETHMAPEVVMG-KPCDAKVDIW 256
Query: 189 SVGCIL 194
S C++
Sbjct: 257 SSCCMM 262
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 80 VYIVYELMDTD-LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
V I EL++ L Q+I+ L +D Y+L Q L GL+Y+H+ +LH D+K N+LL+
Sbjct: 125 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 184
Query: 139 ------ASCD----LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
A CD L + GL ++ D++ T + APE+++ A +DIW
Sbjct: 185 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG---TETHMAPEVVMG-KPCDAKVDIW 240
Query: 189 SVGCIL 194
S C++
Sbjct: 241 SSCCMM 246
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 113/247 (45%), Gaps = 39/247 (15%)
Query: 49 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-QLTDDHC 106
+EI +L H N++ + + ++ ++ +++E + D+ + I + +L +
Sbjct: 50 KEISILNIARHRNILHLHESF-----ESMEELVMIFEFISGLDIFERINTSAFELNEREI 104
Query: 107 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA--SCDLKIGDFGLARTTSETDFMTEYV 164
+++Q+ L+++HS ++ H D++P N++ S +KI +FG AR D
Sbjct: 105 VSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSP 223
Y APE+ + TA D+WS+G ++ +++ P + ++I +
Sbjct: 165 TAPEYYAPEVHQHDVVSTAT-DMWSLGTLVYVLLSGINPFLAETN--------QQIIENI 215
Query: 224 DDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA 283
+A F + A F S A+D ++++LV + R+T EA
Sbjct: 216 MNAEYTF--DEEA------------------FKEISIEAMDFVDRLLVKERKSRMTASEA 255
Query: 284 LRHPYLQ 290
L+HP+L+
Sbjct: 256 LQHPWLK 262
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 80 VYIVYELMDTD-LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
V I EL++ L Q+I+ L +D Y+L Q L GL+Y+H+ +LH D+K N+LL+
Sbjct: 139 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 198
Query: 139 ------ASCD----LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 188
A CD L + GL ++ D++ T + APE+++ A +DIW
Sbjct: 199 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG---TETHMAPEVVMG-KPCDAKVDIW 254
Query: 189 SVGCIL 194
S C++
Sbjct: 255 SSCCMM 260
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 39 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 88
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q+++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 89 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 148
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 149 KVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 206
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 207 GMSP-YPGID 215
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 39 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIIIEF 88
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q+++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 89 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 148
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 149 KVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 206
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 207 GMSP-YPGID 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 20/189 (10%)
Query: 21 VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDV 80
+ T VA+K++ ++ + R REI++L+ + + ++ + + P + ++
Sbjct: 31 LGDNTGALVAVKQLQHSGPD--QQRDFQREIQILKALHSDFIVKYRGVSYGPGRP---EL 85
Query: 81 YIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSASVLHRDLKPSNLLLN 138
+V E + + + + D + LY Q+ +G++Y+ S +HRDL N+L+
Sbjct: 86 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 145
Query: 139 ASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRAPELLLNCTEYTAAIDIWSV 190
+ +KI DFGLA+ + V R WY APE L + ++ D+WS
Sbjct: 146 SEAHVKIADFGLAKLLP---LDKDXXVVREPGQSPIFWY-APESLSD-NIFSRQSDVWSF 200
Query: 191 GCILGEIMT 199
G +L E+ T
Sbjct: 201 GVVLYELFT 209
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E M + S+ + + +++ +++ L +HS +HRD+KP N+LL+
Sbjct: 144 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK 203
Query: 140 SCDLKIGDFGLARTTSETDFM--TEYVVTRWYRAPELLLNCTE---YTAAIDIWSVGCIL 194
S LK+ DFG ++ + V T Y +PE+L + Y D WSVG L
Sbjct: 204 SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 263
Query: 195 GEIMTREPLF 204
E++ + F
Sbjct: 264 YEMLVGDTPF 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E M + S+ + + +++ +++ L +HS +HRD+KP N+LL+
Sbjct: 149 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK 208
Query: 140 SCDLKIGDFGLARTTSETDFM--TEYVVTRWYRAPELLLNCTE---YTAAIDIWSVGCIL 194
S LK+ DFG ++ + V T Y +PE+L + Y D WSVG L
Sbjct: 209 SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 268
Query: 195 GEIMTREPLF 204
E++ + F
Sbjct: 269 YEMLVGDTPF 278
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 95/197 (48%), Gaps = 21/197 (10%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 46 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 95
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q+++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 96 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 155
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMTR 200
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 156 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 213
Query: 201 E-PLFPGKDYVHQLRLI 216
+PG D L+
Sbjct: 214 GMSPYPGIDLSQVYELL 230
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTR 167
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+ + + R
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
W APE L + +T + D+WS G +L EI +
Sbjct: 198 WM-APESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDF 159
LT +H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D+
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 160 MTE---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ + + +W APE + + YT D+WS G +L EI +
Sbjct: 255 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 295
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 41 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIIIEF 90
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q+++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 150
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 151 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 208
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 209 GMSP-YPGID 217
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 41 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIIIEF 90
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q+++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 150
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 151 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 209 GMSP-YPGID 217
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDF 159
LT +H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D+
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 160 MTE---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ + + +W APE + + YT D+WS G +L EI +
Sbjct: 257 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 297
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 41 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 90
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q+++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 150
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 151 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 208
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 209 GMSP-YPGID 217
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDF 159
LT +H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D+
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 160 MTE---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ + + +W APE + + YT D+WS G +L EI +
Sbjct: 250 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 290
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTR 167
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+ + + R
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
W APE L + +T + D+WS G +L EI +
Sbjct: 197 WM-APESLKDGV-FTTSSDMWSFGVVLWEITS 226
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 41 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 90
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q+++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 150
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 151 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 208
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 209 GMSP-YPGID 217
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDF 159
LT +H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D+
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 160 MTE---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
+ + + +W APE + + YT D+WS G +L EI +
Sbjct: 248 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 288
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 161 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 205
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 161 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 205
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E M + S+ + + +++ +++ L +HS +HRD+KP N+LL+
Sbjct: 149 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK 208
Query: 140 SCDLKIGDFGLARTTSETDFM--TEYVVTRWYRAPELLLNCTE---YTAAIDIWSVGCIL 194
S LK+ DFG ++ + V T Y +PE+L + Y D WSVG L
Sbjct: 209 SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 268
Query: 195 GEIMTREPLF 204
E++ + F
Sbjct: 269 YEMLVGDTPF 278
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 28 EVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM 87
+VAIK + + D +RE +++ +++ ++ + + + + +V E+
Sbjct: 365 DVAIKVLKQGTEKA-DTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEMA 417
Query: 88 DTD-LHQ-IIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKI 145
LH+ ++ +++ + L+Q+ G+KY+ + +HR+L N+LL KI
Sbjct: 418 GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKI 477
Query: 146 GDFGLARTTSETD-FMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
DFGL++ D + T +W + APE +N ++++ D+WS G + E ++
Sbjct: 478 SDFGLSKALGADDSYYTARSAGKWPLKWYAPE-CINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 46 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 95
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 96 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 155
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 156 KVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 213
Query: 200 -REPLFPGKDYVHQLRLI 216
P +PG D L+
Sbjct: 214 GMSP-YPGIDLSQVYELL 230
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 123 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 182
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 183 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 227
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 160 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 204
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 33/199 (16%)
Query: 29 VAIKKIGNAFDNIIDARRTL-REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM 87
VA+K + A ++ AR+ RE +LL ++H++++ + + + +V+E M
Sbjct: 74 VAVKALKEASES---ARQDFQREAELLTMLQHQHIVRFFGVCTEGRP-----LLMVFEYM 125
Query: 88 -DTDLHQIIRS---DQQLTDDH-----CQYFLYQLLR-------GLKYVHSASVLHRDLK 131
DL++ +RS D +L L QLL G+ Y+ +HRDL
Sbjct: 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLA 185
Query: 132 PSNLLLNASCDLKIGDFGLARTTSETDFM----TEYVVTRWYRAPELLLNCTEYTAAIDI 187
N L+ +KIGDFG++R TD+ + RW PE +L ++T D+
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM-PPESILY-RKFTTESDV 243
Query: 188 WSVGCILGEIMT--REPLF 204
WS G +L EI T ++P +
Sbjct: 244 WSFGVVLWEIFTYGKQPWY 262
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 161 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 42 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIIIEF 91
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 92 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 151
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 152 KVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 209
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 210 GMSP-YPGID 218
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 175 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 219
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 46 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 95
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 96 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 155
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 156 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 213
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 214 GMSP-YPGID 222
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 175 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 219
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDF 155
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 156 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 200
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 176 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 220
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 176 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 220
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 33/199 (16%)
Query: 29 VAIKKIGNAFDNIIDARRTL-REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM 87
VA+K + A ++ AR+ RE +LL ++H++++ + + + +V+E M
Sbjct: 45 VAVKALKEASES---ARQDFQREAELLTMLQHQHIVRFFGVCTEGRP-----LLMVFEYM 96
Query: 88 -DTDLHQIIRS---DQQLTDDH-----CQYFLYQLLR-------GLKYVHSASVLHRDLK 131
DL++ +RS D +L L QLL G+ Y+ +HRDL
Sbjct: 97 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLA 156
Query: 132 PSNLLLNASCDLKIGDFGLARTTSETDFM----TEYVVTRWYRAPELLLNCTEYTAAIDI 187
N L+ +KIGDFG++R TD+ + RW PE +L ++T D+
Sbjct: 157 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM-PPESILY-RKFTTESDV 214
Query: 188 WSVGCILGEIMT--REPLF 204
WS G +L EI T ++P +
Sbjct: 215 WSFGVVLWEIFTYGKQPWY 233
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 176 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 220
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 45 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 94
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 95 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 154
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 155 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 212
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 213 GMSP-YPGID 221
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 203 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 247
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 33/199 (16%)
Query: 29 VAIKKIGNAFDNIIDARRTL-REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM 87
VA+K + A ++ AR+ RE +LL ++H++++ + + + +V+E M
Sbjct: 51 VAVKALKEASES---ARQDFQREAELLTMLQHQHIVRFFGVCTEGRP-----LLMVFEYM 102
Query: 88 -DTDLHQIIRS---DQQLTDDH-----CQYFLYQLLR-------GLKYVHSASVLHRDLK 131
DL++ +RS D +L L QLL G+ Y+ +HRDL
Sbjct: 103 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLA 162
Query: 132 PSNLLLNASCDLKIGDFGLARTTSETDFM----TEYVVTRWYRAPELLLNCTEYTAAIDI 187
N L+ +KIGDFG++R TD+ + RW PE +L ++T D+
Sbjct: 163 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM-PPESILY-RKFTTESDV 220
Query: 188 WSVGCILGEIMT--REPLF 204
WS G +L EI T ++P +
Sbjct: 221 WSFGVVLWEIFTYGKQPWY 239
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 99 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 158
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 159 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 203
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 46 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIIIEF 95
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 96 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 155
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 156 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 213
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 214 GMSP-YPGID 222
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 46 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 95
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 96 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 155
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 156 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATY 213
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 214 GMSP-YPGID 222
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 203 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 247
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 188 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 232
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL-------ART 153
LT+D + L + RGL+ +H+ HRDLKP+N+LL + D G
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190
Query: 154 TSETDFMTEYVVTRW---YRAPELL---LNCTEYTAAIDIWSVGCILGEIMTREPLFPGK 207
+ + + ++ R YRAPEL +C D+WS+GC+L +M E
Sbjct: 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCV-IDERTDVWSLGCVLYAMMFGE------ 243
Query: 208 DYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLE 267
P D + F + D+ V + Q + P SS LL
Sbjct: 244 --------------GPYD--MVFQKGDSVALAV------QNQLSIPQSPRHSSALWQLLN 281
Query: 268 KMLVFDPNKR------ITVEEALRHP 287
M+ DP++R ++ EAL+ P
Sbjct: 282 SMMTVDPHQRPHIPLLLSQLEALQPP 307
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 195 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 239
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 54 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 103
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 104 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 163
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 164 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 221
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 222 GMSP-YPGID 230
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 156 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 200
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 208 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 252
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 189 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 233
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 188 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 232
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 41 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 90
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 91 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 150
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 151 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 208
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 209 GMSP-YPGID 217
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 203 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 247
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 90 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 148
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 149 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCIL 194
G +T + T++ TR Y PE + + + +WS+G +L
Sbjct: 189 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 233
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 43 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 92
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 93 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 152
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 153 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 210
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 211 GMSP-YPGID 219
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 43 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 92
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 93 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 152
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 153 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 210
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 211 GMSP-YPGID 219
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 14/185 (7%)
Query: 28 EVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI-IRPPKKDTFNDVYIVYEL 86
+VA+K + D LRE ++ +H +V + + +R K ++
Sbjct: 53 KVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPF 112
Query: 87 MD-TDLHQIIRSDQ------QLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
M DLH + + + L F+ + G++Y+ S + +HRDL N +L
Sbjct: 113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAE 172
Query: 140 SCDLKIGDFGLARTTSETDFMTEYVVT----RWYRAPELLLNCTEYTAAIDIWSVGCILG 195
+ + DFGL+R D+ + + +W L N YT D+W+ G +
Sbjct: 173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNL--YTVHSDVWAFGVTMW 230
Query: 196 EIMTR 200
EIMTR
Sbjct: 231 EIMTR 235
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 41 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 90
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 91 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 150
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 151 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATY 208
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 209 GMSP-YPGID 217
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 91 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 150
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 456 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 515
Query: 151 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 516 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTR 167
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD + + R
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
W APE L + +T + D+WS G +L EI +
Sbjct: 198 WM-APESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTR 167
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD + + R
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
W APE L + +T + D+WS G +L EI +
Sbjct: 198 WM-APESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 91 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 150
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 112 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 171
Query: 151 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 172 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTR 167
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD + + R
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
W APE L + +T + D+WS G +L EI +
Sbjct: 195 WM-APESLKDGV-FTTSSDMWSFGVVLWEITS 224
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 91 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 150
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 151 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 174 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 91 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 150
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 151 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 174 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 91 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 150
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 457 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 516
Query: 151 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 517 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 248 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 297
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q+++ Y Q+ ++Y+ + +HR+L N L+ + +
Sbjct: 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLV 357
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMTR 200
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 358 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATY 415
Query: 201 E-PLFPGKD 208
+PG D
Sbjct: 416 GMSPYPGID 424
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 91 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 150
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 104 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 163
Query: 151 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 164 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 80 VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 138
++ V E ++ DL I+ ++ + +++ +++ L ++H +++RDLK N+LL+
Sbjct: 99 LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD 158
Query: 139 ASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 197
K+ DFG+ + T + T Y APE+L Y A+D W++G +L E+
Sbjct: 159 HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML-YGPAVDWWAMGVLLYEM 217
Query: 198 MTREPLFPGKD 208
+ F ++
Sbjct: 218 LCGHAPFEAEN 228
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW 168
+ +Q+ RG++++ S +HRDL N+LL+ + +KI DFGLAR + TR
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 169 ---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPG----KDYVHQLR 214
+ APE + + Y+ D+WS G +L EI + +PG +D+ +LR
Sbjct: 264 PLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLR 316
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 91 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 150
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 98 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 157
Query: 151 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 158 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 91 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 150
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 94 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 153
Query: 151 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 154 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 91 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 150
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 92 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 151
Query: 151 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 152 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 127/298 (42%), Gaps = 49/298 (16%)
Query: 28 EVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD-------TFNDV 80
EVA+ K+ NA + + A + L + ++L+ E +D++ F D
Sbjct: 89 EVAVVKLKNA--DKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146
Query: 81 YIVYELMD----TDLHQII-RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
+Y +MD DL ++ + + +L ++ +++L +++ + VH +HRD+KP N+
Sbjct: 147 NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNI 206
Query: 136 LLNASCDLKIGDFGLARTTSETDFMTEYVV--TRWYRAPELLL----NCTEYTAAIDIWS 189
L++ + +++ DFG E + V T Y +PE+L Y D WS
Sbjct: 207 LMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWS 266
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 249
+G + E++ E F + V Y + + +
Sbjct: 267 LGVCMYEMLYGETPFYAESLVET--------------------------YGKIMNHKERF 300
Query: 250 QFATRFPNKSSGAVDLLEKMLVFDPNK--RITVEEALRHPYLQSLHDLNDEPVCPRPF 305
QF T+ + S A DL+ +++ ++ + +E+ +HP+ + D ++ C P+
Sbjct: 301 QFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI-DWDNIRNCEAPY 357
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 287 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 336
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HR+L N L+ + +
Sbjct: 337 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLV 396
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMTR 200
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 397 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATY 454
Query: 201 E-PLFPGKD 208
+PG D
Sbjct: 455 GMSPYPGID 463
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTR 167
++ G+ Y+++ +HR+L N ++ +KIGDFG+ R ETD+ + + R
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
W APE L + +T + D+WS G +L EI +
Sbjct: 198 WM-APESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 4 KLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 63
K RG+YD VAIK I + + + E K++ ++ HE ++
Sbjct: 44 KWRGQYD------------------VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLV 82
Query: 64 AIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QLTDDHCQYFLYQL 113
+ + + ++I+ E M ++ ++ Q ++ D C+
Sbjct: 83 QLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE------ 131
Query: 114 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYR 170
++Y+ S LHRDL N L+N +K+ DFGL+R ET + RW
Sbjct: 132 --AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRW-S 188
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT 199
PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 189 PPEVLMY-SKFSSKSDIWAFGVLMWEIYS 216
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTR 167
++ G+ Y+++ +HR+L N ++ +KIGDFG+ R ETD+ + + R
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
W APE L + +T + D+WS G +L EI +
Sbjct: 199 WM-APESLKDGV-FTTSSDMWSFGVVLWEITS 228
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 245 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 294
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HR+L N L+ + +
Sbjct: 295 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLV 354
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMTR 200
K+ DFGL+R + D T + ++ + APE L +++ D+W+ G +L EI T
Sbjct: 355 KVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATY 412
Query: 201 E-PLFPGKD 208
+PG D
Sbjct: 413 GMSPYPGID 421
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 76 TFNDVYIVYELMDTDLHQIIRSDQQ-LTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPS 133
T DV+I ELM T ++ + Q + + +++ L Y+ V+HRD+KPS
Sbjct: 95 TNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPS 154
Query: 134 NLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL----LNCTEYTAAIDIWS 189
N+LL+ +K+ DFG++ + Y APE + +Y D+WS
Sbjct: 155 NILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWS 214
Query: 190 VGCILGEIMTREPLFPGKDYVHQLRLITELI 220
+G L E+ T + FP K+ ++T+++
Sbjct: 215 LGISLVELATGQ--FPYKNCKTDFEVLTKVL 243
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 42 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 91
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 92 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 151
Query: 144 KIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + + +W APE L +++ D+W+ G +L EI T
Sbjct: 152 KVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPESLAY-NKFSIKSDVWAFGVLLWEIATY 209
Query: 200 -REPLFPGKDYVHQLRLI 216
P +PG D L+
Sbjct: 210 GMSP-YPGIDLSQVYELL 226
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 23/190 (12%)
Query: 29 VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDII--RPPKKDTFNDVYIVYEL 86
VA+K + ++ ++ L+E +++ ++H N++ + + PP YI+ E
Sbjct: 43 VAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FYIITEF 92
Query: 87 MD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M +L +R + Q++ Y Q+ ++Y+ + +HRDL N L+ + +
Sbjct: 93 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 152
Query: 144 KIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT- 199
K+ DFGL+R + + +W APE L +++ D+W+ G +L EI T
Sbjct: 153 KVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 210
Query: 200 -REPLFPGKD 208
P +PG D
Sbjct: 211 GMSP-YPGID 219
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 91 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 150
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 98 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 157
Query: 151 ART--TSETDFMTEY---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
++ E + + +WY APE +N ++++ D+WS G ++ E +
Sbjct: 158 SKALRADENXYKAQTHGKWPVKWY-APE-CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTR 167
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ET + + + R
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
W APE L + +T + D+WS G +L EI +
Sbjct: 198 WM-APESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 49/209 (23%)
Query: 4 KLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 63
K RG+YD VAIK I + + + E K++ ++ HE ++
Sbjct: 28 KWRGQYD------------------VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLV 66
Query: 64 AIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QLTDDHCQYFLYQL 113
+ + + ++I+ E M ++ ++ Q ++ D C+
Sbjct: 67 QLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE------ 115
Query: 114 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYR 170
++Y+ S LHRDL N L+N +K+ DFGL+R + ++ + RW
Sbjct: 116 --AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-S 172
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT 199
PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 173 PPEVLMY-SKFSSKSDIWAFGVLMWEIYS 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 49/209 (23%)
Query: 4 KLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 63
K RG+YD VAIK I + + + E K++ ++ HE ++
Sbjct: 24 KWRGQYD------------------VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLV 62
Query: 64 AIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QLTDDHCQYFLYQL 113
+ + + ++I+ E M ++ ++ Q ++ D C+
Sbjct: 63 QLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE------ 111
Query: 114 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYR 170
++Y+ S LHRDL N L+N +K+ DFGL+R + ++ + RW
Sbjct: 112 --AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-S 168
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT 199
PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 169 PPEVLMY-SKFSSKSDIWAFGVLMWEIYS 196
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 49/209 (23%)
Query: 4 KLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 63
K RG+YD VAIK I + + + E K++ ++ HE ++
Sbjct: 44 KWRGQYD------------------VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLV 82
Query: 64 AIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QLTDDHCQYFLYQL 113
+ + + ++I+ E M ++ ++ Q ++ D C+
Sbjct: 83 QLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE------ 131
Query: 114 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYR 170
++Y+ S LHRDL N L+N +K+ DFGL+R + ++ + RW
Sbjct: 132 --AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-S 188
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT 199
PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 189 PPEVLMY-SKFSSKSDIWAFGVLMWEIYS 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 49/209 (23%)
Query: 4 KLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 63
K RG+YD VAIK I + + + E K++ ++ HE ++
Sbjct: 29 KWRGQYD------------------VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLV 67
Query: 64 AIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QLTDDHCQYFLYQL 113
+ + + ++I+ E M ++ ++ Q ++ D C+
Sbjct: 68 QLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE------ 116
Query: 114 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYR 170
++Y+ S LHRDL N L+N +K+ DFGL+R + ++ + RW
Sbjct: 117 --AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-S 173
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT 199
PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 174 PPEVLMY-SKFSSKSDIWAFGVLMWEIYS 201
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 44/225 (19%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E + DL+ ++ + + + + +L + +H ++H DLKP+N L+
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 140 SCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNCTE----------YTAAID 186
LK+ DFG+A + + + V T Y PE + + + + D
Sbjct: 190 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 249
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRC 246
+WS+GCIL + + F + ++Q+ + +I P+
Sbjct: 250 VWSLGCILYYMTYGKTPF--QQIINQISKLHAII-DPN---------------------- 284
Query: 247 RKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
FP+ + D+L+ L DP +RI++ E L HPY+Q
Sbjct: 285 ----HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 49/209 (23%)
Query: 4 KLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 63
K RG+YD VAIK I + + + E K++ ++ HE ++
Sbjct: 35 KWRGQYD------------------VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLV 73
Query: 64 AIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QLTDDHCQYFLYQL 113
+ + + ++I+ E M ++ ++ Q ++ D C+
Sbjct: 74 QLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE------ 122
Query: 114 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYR 170
++Y+ S LHRDL N L+N +K+ DFGL+R + ++ + RW
Sbjct: 123 --AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-S 179
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT 199
PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 180 PPEVLMY-SKFSSKSDIWAFGVLMWEIYS 207
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM----TEYVVTR 167
Q+ G+ Y+ +HRDL N L+ + +KI DFGL+R D+ + + R
Sbjct: 182 QVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR 241
Query: 168 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
W + N YT D+W+ G +L EI +
Sbjct: 242 WMPPESIFYN--RYTTESDVWAYGVVLWEIFS 271
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E + DL+ ++ + + + + +L + +H ++H DLKP+N L+
Sbjct: 87 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 145
Query: 140 SCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNCTE----------YTAAID 186
LK+ DFG+A + + V T Y PE + + + + D
Sbjct: 146 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 205
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRC 246
+WS+GCIL + + P + ++Q+ + +I P+
Sbjct: 206 VWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPN---------------------- 240
Query: 247 RKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
FP+ + D+L+ L DP +RI++ E L HPY+Q
Sbjct: 241 ----HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E + DL+ ++ + + + + +L + +H ++H DLKP+N L+
Sbjct: 84 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 142
Query: 140 SCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNCTE----------YTAAID 186
LK+ DFG+A + + V T Y PE + + + + D
Sbjct: 143 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 202
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRC 246
+WS+GCIL + + P + ++Q+ + +I P+
Sbjct: 203 VWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPN---------------------- 237
Query: 247 RKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
FP+ + D+L+ L DP +RI++ E L HPY+Q
Sbjct: 238 ----HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 49/209 (23%)
Query: 4 KLRGEYDDIIFFIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 63
K RG+YD VAIK I + + + E K++ ++ HE ++
Sbjct: 29 KWRGQYD------------------VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLV 67
Query: 64 AIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QLTDDHCQYFLYQL 113
+ + + ++I+ E M ++ ++ Q ++ D C+
Sbjct: 68 QLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE------ 116
Query: 114 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT---EYVVTRWYR 170
++Y+ S LHRDL N L+N +K+ DFGL+R + ++ + RW
Sbjct: 117 --AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRW-S 173
Query: 171 APELLLNCTEYTAAIDIWSVGCILGEIMT 199
PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 174 PPEVLMY-SKFSSKSDIWAFGVLMWEIYS 201
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E + DL+ ++ + + + + +L + +H ++H DLKP+N L+
Sbjct: 83 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 141
Query: 140 SCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNCTE----------YTAAID 186
LK+ DFG+A + + V T Y PE + + + + D
Sbjct: 142 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 201
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRC 246
+WS+GCIL + + P + ++Q+ + +I P+
Sbjct: 202 VWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPN---------------------- 236
Query: 247 RKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
FP+ + D+L+ L DP +RI++ E L HPY+Q
Sbjct: 237 ----HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E + DL+ ++ + + + + +L + +H ++H DLKP+N L+
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 140 SCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNCTE----------YTAAID 186
LK+ DFG+A + + V T Y PE + + + + D
Sbjct: 190 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 249
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRC 246
+WS+GCIL + + F + ++Q+ + +I P+
Sbjct: 250 VWSLGCILYYMTYGKTPF--QQIINQISKLHAII-DPN---------------------- 284
Query: 247 RKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
FP+ + D+L+ L DP +RI++ E L HPY+Q
Sbjct: 285 ----HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E + DL+ ++ + + + + +L + +H ++H DLKP+N L+
Sbjct: 103 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 161
Query: 140 SCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNCTE----------YTAAID 186
LK+ DFG+A + + V T Y PE + + + + D
Sbjct: 162 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 221
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRC 246
+WS+GCIL + + P + ++Q+ + +I P+
Sbjct: 222 VWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPN---------------------- 256
Query: 247 RKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
FP+ + D+L+ L DP +RI++ E L HPY+Q
Sbjct: 257 ----HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 7/202 (3%)
Query: 20 AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFND 79
+++ET EVA ++ + + +R E + L+ ++H N++ D K
Sbjct: 45 GLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCI 104
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS--VLHRDLKPSNLLL 137
V + L ++ + + + Q+L+GL+++H+ + ++HRDLK N+ +
Sbjct: 105 VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI 164
Query: 138 NA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVG-CILG 195
+ +KIGD GLA T F + T + APE +Y ++D+++ G C L
Sbjct: 165 TGPTGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXYEE--KYDESVDVYAFGXCXLE 221
Query: 196 EIMTREPLFPGKDYVHQLRLIT 217
+ P ++ R +T
Sbjct: 222 XATSEYPYSECQNAAQIYRRVT 243
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 46 RTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDD 104
R RE + ++ +V+ I D + +Y+ L++ DL +R L
Sbjct: 80 RXQREARTAGRLQEPHVVPIHDF-----GEIDGQLYVDXRLINGVDLAAXLRRQGPLAPP 134
Query: 105 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF--MTE 162
+ Q+ L H+A HRD+KP N+L++A + DFG+A T++ +
Sbjct: 135 RAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN 194
Query: 163 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPG 206
V T +Y APE + + T DI+++ C+L E +T P + G
Sbjct: 195 TVGTLYYXAPE-RFSESHATYRADIYALTCVLYECLTGSPPYQG 237
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 44/225 (19%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E + DL+ ++ + + + + +L + +H ++H DLKP+N L+
Sbjct: 103 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 161
Query: 140 SCDLKIGDFGLARTTSETDFMT---EYVVTRWYRAPELLLNCTE----------YTAAID 186
LK+ DFG+A V T Y PE + + + + D
Sbjct: 162 DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 221
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRC 246
+WS+GCIL + + P + ++Q+ + +I P+
Sbjct: 222 VWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPN---------------------- 256
Query: 247 RKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 290
FP+ + D+L+ L DP +RI++ E L HPY+Q
Sbjct: 257 ----HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 15 FIFSAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVI---AIKDIIR 70
F++ A RE + + N + R ++E+ ++ + H N++ + I +
Sbjct: 43 FVYEAQDVGSGREYALKRLLSNEEEK---NRAIIQEVCFMKKLSGHPNIVQFCSAASIGK 99
Query: 71 PPKKDTFNDVYIVYELMDTDLHQIIR---SDQQLTDDHCQYFLYQLLRGLKYVHSAS--V 125
+ ++ EL L + ++ S L+ D YQ R ++++H +
Sbjct: 100 EESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPI 159
Query: 126 LHRDLKPSNLLLNASCDLKIGDFGLARTTS---------ETDFMTEYVVTR----WYRAP 172
+HRDLK NLLL+ +K+ DFG A T S + + E +TR YR P
Sbjct: 160 IHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTP 219
Query: 173 ELLLNCTEYTAA--IDIWSVGCIL 194
E++ + + DIW++GCIL
Sbjct: 220 EIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 44/225 (19%)
Query: 80 VYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 139
+Y+V E + DL+ ++ + + + + +L + +H ++H DLKP+N L+
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 140 SCDLKIGDFGLAR-----TTS--------ETDFMTEYVVTRWYRAPELLLNCTEYTAAID 186
LK+ DFG+A TTS ++M + + E + ++ + D
Sbjct: 190 DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSD 249
Query: 187 IWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRC 246
+WS+GCIL + + F + ++Q+ + +I P+
Sbjct: 250 VWSLGCILYYMTYGKTPF--QQIINQISKLHAII-DPN---------------------- 284
Query: 247 RKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 290
FP+ D+L+ L DP +RI++ E L HPY+Q
Sbjct: 285 ----HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 6/160 (3%)
Query: 50 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 109
E++++ H N++ ++ P + Y+ + + L + S L Q
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 110 LYQLLRGLKYVHS---ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV- 165
RGL Y+H ++HRD+K +N+LL+ + +GDFGLA+ D V
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 166 -TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 204
T + APE L+ + + D++ G +L E++T + F
Sbjct: 205 GTIGHIAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 26 REEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYE 85
+++VAIK I + + + E +++ + H ++ + + + +V+E
Sbjct: 31 KDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-----ICLVFE 82
Query: 86 LMDTD-LHQIIRSDQQL-TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDL 143
M+ L +R+ + L + + G+ Y+ ASV+HRDL N L+ + +
Sbjct: 83 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVI 142
Query: 144 KIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
K+ DFG+ R + + T T++ + +PE + + + Y++ D+WS G ++ E+ +
Sbjct: 143 KVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 160
L+ +F + RG+ Y+ +HRDL N+L+ + KI DFGL+R
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 198
Query: 161 T-EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW LN + YT D+WS G +L EI++
Sbjct: 199 TMGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 112 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLART----TSETDFMTEYVVTR 167
Q+ +G+ Y+ ++HRDL N+L+ + +KI DFGLAR E + + +
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 184
Query: 168 WYRAPELLLNCTEY---TAAIDIWSVGCILGEIMTREPLFPGKDY 209
W + L C Y T D+WS G + E+MT F GK Y
Sbjct: 185 W-----MALECIHYRKFTHQSDVWSYGVTIWELMT----FGGKPY 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 28 EVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD-------TFNDV 80
EVA+ K+ N I A + L + ++L+ E +D++ F D
Sbjct: 105 EVAVVKMKNT--ERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDE 162
Query: 81 YIVYELMD----TDLHQII-RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
+Y +MD DL ++ + + +L +D ++++ +++ + +H +HRD+KP N+
Sbjct: 163 NHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNV 222
Query: 136 LLNASCDLKIGDFG--LARTTSETDFMTEYVVTRWYRAPELLL----NCTEYTAAIDIWS 189
LL+ + +++ DFG L T + V T Y +PE+L +Y D WS
Sbjct: 223 LLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWS 282
Query: 190 VGCILGEIMTREPLFPGKDYV 210
+G + E++ E F + V
Sbjct: 283 LGVCMYEMLYGETPFYAESLV 303
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 101 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 160
L+ +F + RG+ Y+ +HRDL N+L+ + KI DFGL+R
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 188
Query: 161 T-EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
T + RW LN + YT D+WS G +L EI++
Sbjct: 189 TMGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 28 EVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKD-------TFNDV 80
EVA+ K+ N I A + L + ++L+ E +D++ F D
Sbjct: 89 EVAVVKMKNT--ERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDE 146
Query: 81 YIVYELMD----TDLHQII-RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNL 135
+Y +MD DL ++ + + +L +D ++++ +++ + +H +HRD+KP N+
Sbjct: 147 NHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNV 206
Query: 136 LLNASCDLKIGDFG--LARTTSETDFMTEYVVTRWYRAPELLL----NCTEYTAAIDIWS 189
LL+ + +++ DFG L T + V T Y +PE+L +Y D WS
Sbjct: 207 LLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWS 266
Query: 190 VGCILGEIMTREPLFPGKDYV 210
+G + E++ E F + V
Sbjct: 267 LGVCMYEMLYGETPFYAESLV 287
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 107 QYFL---YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR--TTSETDFMT 161
QY L Q+ +G+ Y+ ++HRDL N+L+ +KI DFGLA+ E ++
Sbjct: 151 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 162 E--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
E V +W +L YT D+WS G + E+MT
Sbjct: 211 EGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMT 248
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 107 QYFL---YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR--TTSETDFMT 161
QY L Q+ +G+ Y+ ++HRDL N+L+ +KI DFGLA+ E ++
Sbjct: 127 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186
Query: 162 E--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
E V +W +L YT D+WS G + E+MT
Sbjct: 187 EGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMT 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 107 QYFL---YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR--TTSETDFMT 161
QY L Q+ +G+ Y+ ++HRDL N+L+ +KI DFGLA+ E ++
Sbjct: 118 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 162 E--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
E V +W +L YT D+WS G + E+MT
Sbjct: 178 EGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMT 215
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 109 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLART--TSETDFMTE--YV 164
+ Q+ +G+ Y+ ++HRDL N+L+ + +KI DFGLAR ET++ + V
Sbjct: 124 WCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 183
Query: 165 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY 209
+W +L +T D+WS G + E+MT F K Y
Sbjct: 184 PIKWMALESILRR--RFTHQSDVWSYGVTVWELMT----FGAKPY 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 107 QYFL---YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR--TTSETDFMT 161
QY L Q+ +G+ Y+ ++HRDL N+L+ +KI DFGLA+ E ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 162 E--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
E V +W +L YT D+WS G + E+MT
Sbjct: 177 EGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMT 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 107 QYFL---YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR--TTSETDFMT 161
QY L Q+ +G+ Y+ ++HRDL N+L+ +KI DFGLA+ E ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 162 E--YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 199
E V +W +L YT D+WS G + E+MT
Sbjct: 177 EGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMT 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,228,756
Number of Sequences: 62578
Number of extensions: 422556
Number of successful extensions: 3684
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 839
Number of HSP's gapped (non-prelim): 1332
length of query: 336
length of database: 14,973,337
effective HSP length: 99
effective length of query: 237
effective length of database: 8,778,115
effective search space: 2080413255
effective search space used: 2080413255
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)