Query 019729
Match_columns 336
No_of_seqs 268 out of 1835
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 04:04:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019729.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019729hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 4.2E-30 9.1E-35 231.7 30.5 283 43-325 4-312 (485)
2 TIGR01299 synapt_SV2 synaptic 100.0 3.2E-29 7E-34 239.4 29.0 267 45-312 162-474 (742)
3 KOG0254 Predicted transporter 100.0 1.1E-28 2.4E-33 231.1 28.6 288 45-332 40-346 (513)
4 TIGR00887 2A0109 phosphate:H+ 100.0 8.1E-28 1.8E-32 225.1 26.5 271 44-318 10-323 (502)
5 PRK10077 xylE D-xylose transpo 100.0 1E-26 2.3E-31 216.7 32.0 272 46-323 8-311 (479)
6 TIGR00879 SP MFS transporter, 100.0 2.9E-26 6.3E-31 213.0 30.7 285 44-328 22-329 (481)
7 COG2271 UhpC Sugar phosphate p 100.0 9.9E-28 2.1E-32 207.9 17.5 273 41-331 20-301 (448)
8 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.1E-26 6.7E-31 209.2 25.7 178 48-225 6-194 (412)
9 COG2814 AraJ Arabinose efflux 100.0 3.3E-26 7.1E-31 200.8 23.9 244 46-329 9-258 (394)
10 TIGR00891 2A0112 putative sial 99.9 3.9E-25 8.5E-30 201.3 26.9 182 46-227 8-195 (405)
11 TIGR00898 2A0119 cation transp 99.9 8.5E-26 1.8E-30 211.9 22.8 225 71-295 110-339 (505)
12 PRK10642 proline/glycine betai 99.9 3.6E-25 7.8E-30 206.6 26.5 249 51-324 17-292 (490)
13 PRK10406 alpha-ketoglutarate t 99.9 1E-24 2.2E-29 200.5 26.5 246 46-329 18-290 (432)
14 PRK12307 putative sialic acid 99.9 9.3E-25 2E-29 200.6 25.9 256 49-328 17-276 (426)
15 PRK03545 putative arabinose tr 99.9 1.9E-24 4.2E-29 196.2 25.7 168 56-223 15-187 (390)
16 PRK11663 regulatory protein Uh 99.9 8.4E-25 1.8E-29 201.2 22.7 176 50-225 23-203 (434)
17 PRK11551 putative 3-hydroxyphe 99.9 3.3E-24 7.1E-29 195.7 26.3 182 45-226 10-196 (406)
18 TIGR00903 2A0129 major facilit 99.9 1.2E-24 2.6E-29 195.2 22.1 225 67-329 8-237 (368)
19 PRK10213 nepI ribonucleoside t 99.9 5.1E-24 1.1E-28 193.5 25.6 170 54-223 24-198 (394)
20 TIGR00895 2A0115 benzoate tran 99.9 2.8E-24 6.1E-29 195.1 23.5 277 48-329 15-296 (398)
21 PRK09556 uhpT sugar phosphate 99.9 5.6E-25 1.2E-29 204.2 19.2 181 45-225 24-217 (467)
22 PRK15403 multidrug efflux syst 99.9 7.7E-24 1.7E-28 193.4 24.1 238 51-324 17-260 (413)
23 PRK14995 methyl viologen resis 99.9 6.6E-24 1.4E-28 198.3 23.0 177 48-224 4-186 (495)
24 PF00083 Sugar_tr: Sugar (and 99.9 7.3E-30 1.6E-34 236.1 -18.2 269 56-326 6-297 (451)
25 PLN00028 nitrate transmembrane 99.9 7.8E-23 1.7E-27 190.0 27.2 157 64-221 50-219 (476)
26 PRK09705 cynX putative cyanate 99.9 7.5E-23 1.6E-27 185.8 24.9 164 48-213 8-176 (393)
27 TIGR00894 2A0114euk Na(+)-depe 99.9 1.9E-23 4.2E-28 194.0 20.3 262 45-329 14-308 (465)
28 TIGR00893 2A0114 d-galactonate 99.9 1.1E-23 2.3E-28 190.8 18.2 248 64-329 8-262 (399)
29 PRK15075 citrate-proton sympor 99.9 8.3E-23 1.8E-27 188.0 23.7 159 51-209 16-200 (434)
30 PRK09952 shikimate transporter 99.9 1.8E-22 3.9E-27 185.9 25.5 177 50-227 22-226 (438)
31 PRK11273 glpT sn-glycerol-3-ph 99.9 1.1E-22 2.3E-27 188.2 22.4 176 49-225 28-213 (452)
32 TIGR00881 2A0104 phosphoglycer 99.9 9.6E-24 2.1E-28 190.2 14.7 252 60-329 5-263 (379)
33 PRK03893 putative sialic acid 99.9 9.4E-22 2E-26 184.2 28.6 180 47-226 17-200 (496)
34 KOG0255 Synaptic vesicle trans 99.9 6E-23 1.3E-27 193.3 20.5 215 78-293 111-332 (521)
35 PRK03699 putative transporter; 99.9 3.4E-22 7.3E-27 181.7 24.1 167 51-217 8-179 (394)
36 TIGR00710 efflux_Bcr_CflA drug 99.9 2.5E-22 5.5E-27 181.7 22.7 229 63-328 18-252 (385)
37 PRK10091 MFS transport protein 99.9 3E-22 6.5E-27 181.3 23.1 168 56-223 9-181 (382)
38 PRK15402 multidrug efflux syst 99.9 4.8E-22 1E-26 181.5 24.5 179 46-224 9-192 (406)
39 PF07690 MFS_1: Major Facilita 99.9 5.6E-23 1.2E-27 183.5 18.0 165 60-224 6-176 (352)
40 TIGR00711 efflux_EmrB drug res 99.9 5.5E-23 1.2E-27 191.9 18.4 173 52-224 4-181 (485)
41 TIGR00890 2A0111 Oxalate/Forma 99.9 1.5E-22 3.2E-27 182.3 20.5 156 67-223 20-180 (377)
42 KOG1330 Sugar transporter/spin 99.9 1.7E-24 3.7E-29 189.6 7.3 181 44-224 27-213 (493)
43 KOG2532 Permease of the major 99.9 1.5E-22 3.2E-27 184.8 20.0 232 77-331 65-307 (466)
44 TIGR00900 2A0121 H+ Antiporter 99.9 7.1E-22 1.5E-26 177.2 21.5 159 61-219 10-177 (365)
45 PRK11043 putative transporter; 99.9 2.2E-21 4.7E-26 176.9 24.8 221 64-324 20-244 (401)
46 TIGR00712 glpT glycerol-3-phos 99.9 5.6E-22 1.2E-26 182.7 21.1 262 49-329 26-298 (438)
47 TIGR00805 oat sodium-independe 99.9 5.7E-23 1.2E-27 195.8 14.4 260 56-328 39-376 (633)
48 TIGR00886 2A0108 nitrite extru 99.9 1.2E-21 2.5E-26 176.3 22.0 239 64-329 15-272 (366)
49 KOG2533 Permease of the major 99.9 3.6E-22 7.9E-27 182.7 18.1 262 45-323 40-314 (495)
50 PRK10133 L-fucose transporter; 99.9 3.7E-21 8E-26 176.8 24.9 144 51-194 27-173 (438)
51 PRK11652 emrD multidrug resist 99.9 5.1E-21 1.1E-25 174.0 24.3 161 64-224 22-187 (394)
52 TIGR00806 rfc RFC reduced fola 99.9 5E-21 1.1E-25 171.0 22.6 163 65-228 41-210 (511)
53 KOG0253 Synaptic vesicle trans 99.9 2.3E-21 4.9E-26 164.9 19.1 262 46-310 74-353 (528)
54 PRK03633 putative MFS family t 99.9 1.5E-20 3.2E-25 170.2 25.1 141 57-197 13-153 (381)
55 PRK11102 bicyclomycin/multidru 99.9 3.4E-21 7.4E-26 174.0 20.9 160 65-224 6-170 (377)
56 PRK15034 nitrate/nitrite trans 99.9 2.7E-20 5.8E-25 169.0 26.4 159 60-219 44-230 (462)
57 PRK10473 multidrug efflux syst 99.9 1.1E-20 2.4E-25 171.7 23.1 157 68-224 21-182 (392)
58 KOG0252 Inorganic phosphate tr 99.9 1.4E-21 3.1E-26 170.8 15.9 275 43-322 34-343 (538)
59 TIGR00892 2A0113 monocarboxyla 99.9 5.2E-21 1.1E-25 176.9 20.4 248 67-331 36-289 (455)
60 PRK11195 lysophospholipid tran 99.9 1.7E-20 3.7E-25 170.3 23.1 152 70-224 23-177 (393)
61 TIGR00885 fucP L-fucose:H+ sym 99.9 2.6E-20 5.6E-25 169.8 24.1 165 53-217 6-203 (410)
62 PRK10504 putative transporter; 99.9 2E-20 4.4E-25 174.1 23.5 168 56-223 16-188 (471)
63 TIGR00897 2A0118 polyol permea 99.9 9.7E-20 2.1E-24 166.0 24.2 224 71-328 34-267 (402)
64 TIGR00896 CynX cyanate transpo 99.9 7.1E-20 1.5E-24 164.2 22.9 221 67-329 17-243 (355)
65 PRK11646 multidrug resistance 99.9 1.5E-19 3.2E-24 164.6 24.6 153 70-222 30-187 (400)
66 COG2223 NarK Nitrate/nitrite t 99.9 2.7E-20 5.8E-25 162.1 17.7 230 64-333 28-269 (417)
67 PRK05122 major facilitator sup 99.9 7.9E-20 1.7E-24 166.5 21.7 156 61-216 26-194 (399)
68 TIGR00899 2A0120 sugar efflux 99.9 1.1E-19 2.3E-24 164.0 22.2 167 59-225 6-181 (375)
69 PRK10054 putative transporter; 99.9 8.8E-20 1.9E-24 165.8 21.1 159 65-223 22-185 (395)
70 PRK12382 putative transporter; 99.9 2.6E-19 5.5E-24 162.7 23.6 149 64-212 29-190 (392)
71 TIGR00883 2A0106 metabolite-pr 99.8 2.1E-19 4.5E-24 162.8 22.5 233 63-329 6-266 (394)
72 PRK10489 enterobactin exporter 99.8 4.5E-20 9.7E-25 169.1 17.3 226 67-328 34-269 (417)
73 cd06174 MFS The Major Facilita 99.8 4.4E-19 9.5E-24 158.0 22.2 164 57-220 6-173 (352)
74 PRK09874 drug efflux system pr 99.8 1.2E-18 2.7E-23 159.0 24.8 165 58-223 22-196 (408)
75 TIGR00901 2A0125 AmpG-related 99.8 1.3E-18 2.9E-23 155.9 22.2 229 66-328 4-254 (356)
76 KOG2615 Permease of the major 99.8 2.8E-19 6.2E-24 153.0 15.7 144 80-224 63-217 (451)
77 COG0738 FucP Fucose permease [ 99.8 6E-18 1.3E-22 146.6 21.6 237 54-328 17-282 (422)
78 PRK11902 ampG muropeptide tran 99.8 7.4E-18 1.6E-22 153.7 23.2 232 59-326 8-253 (402)
79 TIGR00902 2A0127 phenyl propri 99.8 4.5E-18 9.7E-23 154.0 21.6 235 57-329 11-251 (382)
80 PRK10642 proline/glycine betai 99.8 1.4E-18 2.9E-23 162.4 18.5 174 72-245 272-459 (490)
81 PRK11128 putative 3-phenylprop 99.8 5.7E-18 1.2E-22 153.4 21.4 226 64-329 18-251 (382)
82 PTZ00207 hypothetical protein; 99.8 1.4E-17 3.1E-22 155.4 23.4 166 69-236 46-223 (591)
83 COG2807 CynX Cyanate permease 99.8 3.2E-17 6.9E-22 140.2 23.0 242 50-333 12-258 (395)
84 KOG2504 Monocarboxylate transp 99.8 1.8E-18 3.9E-23 160.0 16.4 279 45-331 41-346 (509)
85 PRK11010 ampG muropeptide tran 99.8 1.7E-17 3.8E-22 154.7 23.1 162 61-224 23-198 (491)
86 PRK06814 acylglycerophosphoeth 99.8 2E-17 4.3E-22 169.6 21.9 221 76-328 42-271 (1140)
87 PF06609 TRI12: Fungal trichot 99.8 1.3E-17 2.7E-22 154.9 16.9 171 46-218 40-214 (599)
88 PRK08633 2-acyl-glycerophospho 99.8 8.8E-17 1.9E-21 165.1 23.4 227 72-328 32-279 (1146)
89 PRK15011 sugar efflux transpor 99.8 2.3E-16 5E-21 143.4 22.9 157 67-224 32-198 (393)
90 TIGR00882 2A0105 oligosacchari 99.8 1.7E-16 3.7E-21 144.4 21.4 157 65-223 17-186 (396)
91 TIGR00924 yjdL_sub1_fam amino 99.7 3.2E-16 7E-21 145.5 20.3 150 70-219 30-190 (475)
92 PRK10207 dipeptide/tripeptide 99.7 1E-16 2.2E-21 149.0 16.8 175 43-220 11-193 (489)
93 KOG3764 Vesicular amine transp 99.7 6.7E-18 1.4E-22 145.6 6.7 142 81-222 102-248 (464)
94 PRK09528 lacY galactoside perm 99.7 9.4E-16 2E-20 140.7 20.7 152 68-221 28-191 (420)
95 TIGR01301 GPH_sucrose GPH fami 99.7 2.3E-15 5.1E-20 137.8 18.4 160 65-224 19-222 (477)
96 TIGR00889 2A0110 nucleoside tr 99.7 2.2E-14 4.9E-19 131.3 21.5 148 70-224 23-183 (418)
97 TIGR02718 sider_RhtX_FptX side 99.7 3.4E-14 7.4E-19 129.1 22.3 237 54-328 5-253 (390)
98 TIGR01299 synapt_SV2 synaptic 99.6 7.5E-15 1.6E-19 141.2 18.4 137 88-224 598-737 (742)
99 PRK09584 tppB putative tripept 99.6 1.5E-14 3.3E-19 135.1 18.3 141 74-214 46-194 (500)
100 PRK15011 sugar efflux transpor 99.6 3.7E-14 8.1E-19 128.9 20.3 146 76-222 243-392 (393)
101 TIGR00880 2_A_01_02 Multidrug 99.6 5.5E-15 1.2E-19 113.7 12.0 132 91-222 4-140 (141)
102 PRK15462 dipeptide/tripeptide 99.6 2.6E-14 5.7E-19 131.4 17.5 141 76-216 36-184 (493)
103 KOG2325 Predicted transporter/ 99.6 3E-14 6.5E-19 128.5 17.0 169 56-225 40-234 (488)
104 PF05977 MFS_3: Transmembrane 99.6 1.4E-13 2.9E-18 128.3 21.6 170 44-220 11-189 (524)
105 PRK09528 lacY galactoside perm 99.6 2E-14 4.4E-19 131.8 15.4 146 79-224 256-407 (420)
106 TIGR00890 2A0111 Oxalate/Forma 99.6 8.4E-14 1.8E-18 125.3 16.6 143 72-214 227-375 (377)
107 PRK11551 putative 3-hydroxyphe 99.6 1.8E-13 3.8E-18 125.0 18.1 150 72-221 242-396 (406)
108 TIGR00792 gph sugar (Glycoside 99.6 5.8E-14 1.3E-18 129.4 14.5 153 72-224 22-198 (437)
109 TIGR00889 2A0110 nucleoside tr 99.6 2.1E-13 4.5E-18 124.9 17.6 152 73-224 231-406 (418)
110 cd06174 MFS The Major Facilita 99.5 3E-13 6.5E-18 120.4 17.0 153 68-220 193-351 (352)
111 TIGR00899 2A0120 sugar efflux 99.5 6.7E-13 1.4E-17 119.7 19.4 146 76-222 226-375 (375)
112 KOG2563 Permease of the major 99.5 1.7E-12 3.8E-17 114.4 20.2 154 43-197 38-199 (480)
113 PRK05122 major facilitator sup 99.5 7.7E-13 1.7E-17 120.5 17.8 150 72-223 238-391 (399)
114 PRK09556 uhpT sugar phosphate 99.5 6.5E-13 1.4E-17 123.5 16.6 149 71-219 279-447 (467)
115 PRK09952 shikimate transporter 99.5 9.3E-13 2E-17 121.4 17.4 148 76-223 277-435 (438)
116 PF03825 Nuc_H_symport: Nucleo 99.5 7.1E-12 1.5E-16 113.4 21.4 226 64-326 16-251 (400)
117 TIGR00893 2A0114 d-galactonate 99.5 1E-12 2.2E-17 118.9 15.9 146 71-217 236-395 (399)
118 PF03137 OATP: Organic Anion T 99.5 2.7E-15 5.8E-20 140.0 -1.0 262 60-330 13-353 (539)
119 TIGR00883 2A0106 metabolite-pr 99.5 7.7E-13 1.7E-17 119.8 15.0 141 71-211 240-391 (394)
120 TIGR00892 2A0113 monocarboxyla 99.5 5.8E-13 1.3E-17 123.4 14.0 145 71-215 262-415 (455)
121 PRK03699 putative transporter; 99.5 2.8E-12 6E-17 116.7 18.3 150 72-222 227-381 (394)
122 TIGR00902 2A0127 phenyl propri 99.5 6.4E-12 1.4E-16 113.9 20.5 143 72-216 227-374 (382)
123 PRK12382 putative transporter; 99.5 2.3E-12 5.1E-17 117.1 16.7 145 72-218 238-386 (392)
124 PRK10077 xylE D-xylose transpo 99.5 1.8E-12 3.9E-17 121.0 16.2 154 71-224 292-461 (479)
125 KOG3626 Organic anion transpor 99.5 4.2E-13 9E-18 126.0 11.7 266 51-331 98-441 (735)
126 PRK09874 drug efflux system pr 99.5 2.6E-12 5.6E-17 117.3 16.3 132 87-218 260-395 (408)
127 PF11700 ATG22: Vacuole efflux 99.4 6.1E-12 1.3E-16 116.0 18.0 170 53-223 286-470 (477)
128 TIGR00879 SP MFS transporter, 99.4 3.3E-12 7.1E-17 118.7 16.2 157 68-224 302-474 (481)
129 PRK10489 enterobactin exporter 99.4 4.1E-12 8.9E-17 116.5 16.2 153 72-224 245-403 (417)
130 PRK03545 putative arabinose tr 99.4 2.6E-11 5.5E-16 110.2 20.1 143 74-218 230-377 (390)
131 TIGR00891 2A0112 putative sial 99.4 4E-12 8.6E-17 115.7 14.8 122 76-197 265-387 (405)
132 TIGR00895 2A0115 benzoate tran 99.4 4.9E-12 1.1E-16 114.8 15.2 126 71-196 271-396 (398)
133 PRK11273 glpT sn-glycerol-3-ph 99.4 1.7E-11 3.6E-16 113.7 18.1 147 72-218 275-432 (452)
134 PRK03633 putative MFS family t 99.4 1.3E-11 2.8E-16 111.9 16.9 146 72-220 222-371 (381)
135 TIGR00788 fbt folate/biopterin 99.4 1.4E-11 3.1E-16 114.2 17.4 164 59-224 35-212 (468)
136 PRK03893 putative sialic acid 99.4 2.7E-12 5.9E-17 120.4 12.8 138 71-208 296-440 (496)
137 TIGR00887 2A0109 phosphate:H+ 99.4 6.8E-12 1.5E-16 117.8 15.3 154 72-225 310-493 (502)
138 TIGR00897 2A0118 polyol permea 99.4 2.2E-11 4.8E-16 111.1 18.0 148 71-220 243-400 (402)
139 PRK09705 cynX putative cyanate 99.4 4.7E-11 1E-15 108.6 19.0 152 71-224 226-385 (393)
140 PRK12307 putative sialic acid 99.4 2.2E-11 4.7E-16 112.0 16.7 126 72-197 253-380 (426)
141 TIGR00898 2A0119 cation transp 99.4 2.7E-11 5.8E-16 113.9 16.7 135 90-224 360-498 (505)
142 KOG0253 Synaptic vesicle trans 99.3 3.9E-12 8.4E-17 109.2 9.2 129 94-222 390-520 (528)
143 COG2270 Permeases of the major 99.3 1.5E-11 3.3E-16 107.9 13.0 174 49-223 253-431 (438)
144 TIGR00900 2A0121 H+ Antiporter 99.3 3.2E-11 6.9E-16 108.1 15.6 126 72-197 233-360 (365)
145 PRK11128 putative 3-phenylprop 99.3 1.5E-10 3.2E-15 105.0 19.8 142 72-215 227-373 (382)
146 PRK10406 alpha-ketoglutarate t 99.3 7.2E-11 1.6E-15 108.8 17.9 151 72-222 265-425 (432)
147 TIGR00882 2A0105 oligosacchari 99.3 6.9E-11 1.5E-15 107.6 17.6 135 81-215 250-389 (396)
148 KOG0569 Permease of the major 99.3 9.2E-11 2E-15 106.9 18.1 176 46-224 268-458 (485)
149 PRK11010 ampG muropeptide tran 99.3 1.1E-10 2.4E-15 109.1 19.0 151 73-223 246-405 (491)
150 PRK09669 putative symporter Ya 99.3 4.4E-11 9.5E-16 110.6 16.2 151 72-222 32-206 (444)
151 PRK11663 regulatory protein Uh 99.3 4.9E-11 1.1E-15 109.9 16.4 147 72-218 265-421 (434)
152 PLN00028 nitrate transmembrane 99.3 3.7E-11 8.1E-16 112.0 14.7 145 76-221 279-433 (476)
153 TIGR02718 sider_RhtX_FptX side 99.3 4.4E-10 9.6E-15 102.1 20.9 143 74-216 232-386 (390)
154 PF06813 Nodulin-like: Nodulin 99.3 1.8E-10 4E-15 96.5 16.7 156 67-224 19-185 (250)
155 COG3104 PTR2 Dipeptide/tripept 99.3 1.9E-10 4.1E-15 103.3 17.7 174 44-220 19-205 (498)
156 KOG4686 Predicted sugar transp 99.3 2.2E-12 4.7E-17 107.0 4.5 147 47-193 41-191 (459)
157 PF05631 DUF791: Protein of un 99.3 6.8E-10 1.5E-14 96.3 19.8 153 70-223 54-219 (354)
158 PRK10504 putative transporter; 99.3 2E-10 4.2E-15 107.1 17.8 126 72-197 283-412 (471)
159 PRK10429 melibiose:sodium symp 99.3 7.1E-11 1.5E-15 110.1 14.6 150 74-223 31-204 (473)
160 PF05977 MFS_3: Transmembrane 99.3 1.8E-10 3.9E-15 107.5 17.2 144 72-215 240-388 (524)
161 COG2271 UhpC Sugar phosphate p 99.3 9.7E-11 2.1E-15 102.8 14.2 170 44-217 250-430 (448)
162 TIGR00792 gph sugar (Glycoside 99.3 4.8E-10 1E-14 103.4 19.6 115 83-197 255-377 (437)
163 TIGR00712 glpT glycerol-3-phos 99.3 1.1E-10 2.4E-15 107.8 14.7 152 72-223 273-436 (438)
164 TIGR00881 2A0104 phosphoglycer 99.2 9.4E-11 2E-15 105.5 13.0 127 76-202 243-378 (379)
165 KOG2504 Monocarboxylate transp 99.2 1.1E-10 2.5E-15 108.3 13.5 156 66-221 314-476 (509)
166 PF13347 MFS_2: MFS/sugar tran 99.2 4.5E-11 9.7E-16 110.0 10.8 151 72-222 24-200 (428)
167 PRK15075 citrate-proton sympor 99.2 7.3E-10 1.6E-14 102.2 18.7 127 71-197 259-391 (434)
168 PF01306 LacY_symp: LacY proto 99.2 3.9E-10 8.4E-15 100.9 15.2 153 66-220 23-187 (412)
169 COG2814 AraJ Arabinose efflux 99.2 1.5E-09 3.3E-14 96.1 18.7 150 68-219 230-384 (394)
170 PF01770 Folate_carrier: Reduc 99.2 3.5E-09 7.5E-14 94.3 20.9 155 72-227 26-188 (412)
171 PRK11902 ampG muropeptide tran 99.2 8.2E-10 1.8E-14 100.8 17.7 148 74-221 234-390 (402)
172 PRK08633 2-acyl-glycerophospho 99.2 4.4E-10 9.5E-15 115.9 17.2 138 75-212 258-401 (1146)
173 PRK10054 putative transporter; 99.2 5.6E-10 1.2E-14 101.6 15.3 146 78-224 237-388 (395)
174 PF01306 LacY_symp: LacY proto 99.2 1.5E-09 3.2E-14 97.2 17.2 144 79-222 253-402 (412)
175 PF03825 Nuc_H_symport: Nucleo 99.2 2.8E-09 6.2E-14 96.5 18.9 153 71-223 228-398 (400)
176 TIGR00710 efflux_Bcr_CflA drug 99.2 3.4E-09 7.4E-14 95.9 19.6 118 76-194 233-356 (385)
177 PRK11462 putative transporter; 99.2 3E-09 6.6E-14 98.7 19.5 143 73-215 33-198 (460)
178 TIGR01272 gluP glucose/galacto 99.2 2.6E-09 5.5E-14 93.9 17.6 126 80-208 173-302 (310)
179 PRK15402 multidrug efflux syst 99.2 3E-09 6.4E-14 97.2 18.7 137 76-213 242-387 (406)
180 TIGR02332 HpaX 4-hydroxyphenyl 99.2 4.5E-10 9.8E-15 102.8 12.9 142 69-210 261-410 (412)
181 PRK10213 nepI ribonucleoside t 99.2 4.6E-09 9.9E-14 95.6 19.4 140 73-213 240-383 (394)
182 PF07690 MFS_1: Major Facilita 99.1 3.9E-10 8.4E-15 100.6 11.5 123 69-191 225-352 (352)
183 TIGR00901 2A0125 AmpG-related 99.1 1E-09 2.3E-14 98.4 14.0 113 72-184 231-355 (356)
184 PRK11646 multidrug resistance 99.1 3.2E-09 7E-14 96.8 17.4 145 72-216 230-383 (400)
185 PRK09848 glucuronide transport 99.1 2.9E-09 6.3E-14 98.6 17.1 123 74-196 33-173 (448)
186 TIGR00903 2A0129 major facilit 99.1 3.1E-09 6.8E-14 95.6 16.7 148 71-222 213-366 (368)
187 PRK09848 glucuronide transport 99.1 9.7E-09 2.1E-13 95.1 20.0 120 77-196 256-384 (448)
188 PRK10091 MFS transport protein 99.1 4.1E-09 9E-14 95.5 17.1 144 73-218 223-373 (382)
189 PRK06814 acylglycerophosphoeth 99.1 1.6E-09 3.4E-14 111.8 15.9 134 76-209 252-410 (1140)
190 TIGR00711 efflux_EmrB drug res 99.1 1.9E-09 4E-14 100.8 15.0 126 72-197 277-407 (485)
191 TIGR00894 2A0114euk Na(+)-depe 99.1 2.4E-09 5.1E-14 99.7 14.6 149 72-221 283-450 (465)
192 PRK10473 multidrug efflux syst 99.1 7.9E-09 1.7E-13 94.0 17.3 131 76-208 230-361 (392)
193 PRK11102 bicyclomycin/multidru 99.1 1.9E-08 4.1E-13 90.9 19.6 119 76-195 221-344 (377)
194 KOG4686 Predicted sugar transp 99.1 3.2E-09 6.9E-14 88.5 13.0 143 76-220 291-442 (459)
195 PRK14995 methyl viologen resis 99.0 5E-09 1.1E-13 98.3 15.0 122 76-197 286-410 (495)
196 COG2223 NarK Nitrate/nitrite t 99.0 1.5E-09 3.3E-14 95.5 10.6 143 75-218 244-398 (417)
197 TIGR00896 CynX cyanate transpo 99.0 5.8E-09 1.3E-13 93.5 14.8 125 72-197 219-345 (355)
198 PRK10133 L-fucose transporter; 99.0 2.6E-08 5.6E-13 91.9 18.9 133 77-212 287-424 (438)
199 PRK10429 melibiose:sodium symp 99.0 2.8E-08 6.2E-13 92.7 19.3 121 76-196 257-389 (473)
200 COG2211 MelB Na+/melibiose sym 99.0 2.2E-09 4.8E-14 97.1 10.9 149 75-223 38-210 (467)
201 PRK11195 lysophospholipid tran 99.0 1.2E-08 2.6E-13 92.9 15.6 138 75-213 231-372 (393)
202 PF13347 MFS_2: MFS/sugar tran 99.0 1.4E-08 3E-13 93.5 16.2 125 71-196 246-380 (428)
203 PF11700 ATG22: Vacuole efflux 99.0 2.6E-07 5.7E-12 85.6 22.3 139 87-225 72-252 (477)
204 PRK11652 emrD multidrug resist 98.9 1.1E-07 2.5E-12 86.4 19.3 122 76-198 234-358 (394)
205 PRK09669 putative symporter Ya 98.9 1E-07 2.3E-12 88.2 19.2 113 85-197 264-385 (444)
206 COG0477 ProP Permeases of the 98.9 5.4E-08 1.2E-12 84.3 16.2 148 64-211 16-175 (338)
207 PRK11043 putative transporter; 98.9 2.4E-07 5.3E-12 84.5 21.1 125 72-197 225-354 (401)
208 TIGR01272 gluP glucose/galacto 98.9 3.8E-08 8.2E-13 86.5 14.8 87 133-219 5-111 (310)
209 TIGR00788 fbt folate/biopterin 98.9 2.8E-08 6.1E-13 92.4 13.7 146 77-222 280-447 (468)
210 KOG2816 Predicted transporter 98.9 1.8E-08 3.9E-13 92.3 12.1 166 55-225 27-204 (463)
211 PRK15034 nitrate/nitrite trans 98.9 3.8E-08 8.2E-13 90.1 13.9 129 88-216 289-449 (462)
212 TIGR00926 2A1704 Peptide:H+ sy 98.9 4.4E-07 9.6E-12 86.9 20.8 146 72-217 10-178 (654)
213 KOG0252 Inorganic phosphate tr 98.8 1.6E-09 3.5E-14 96.0 2.5 176 50-225 304-502 (538)
214 COG2807 CynX Cyanate permease 98.8 4.1E-07 8.8E-12 78.8 16.7 168 45-217 207-381 (395)
215 PRK09584 tppB putative tripept 98.8 2.3E-07 5.1E-12 87.0 16.3 128 87-214 318-472 (500)
216 TIGR00924 yjdL_sub1_fam amino 98.8 3.5E-07 7.5E-12 85.3 17.1 131 87-217 314-464 (475)
217 PF06779 DUF1228: Protein of u 98.8 3.4E-08 7.3E-13 67.5 7.5 80 62-141 4-83 (85)
218 PF03209 PUCC: PUCC protein; 98.8 8.8E-07 1.9E-11 78.4 18.2 121 76-197 6-148 (403)
219 COG2211 MelB Na+/melibiose sym 98.8 1.2E-06 2.6E-11 79.6 19.2 115 80-194 267-390 (467)
220 KOG0254 Predicted transporter 98.8 7.7E-07 1.7E-11 83.9 18.4 177 45-224 292-487 (513)
221 PF00083 Sugar_tr: Sugar (and 98.8 6.8E-11 1.5E-15 109.5 -8.9 151 72-224 275-440 (451)
222 TIGR00886 2A0108 nitrite extru 98.8 3.9E-08 8.5E-13 88.4 9.3 110 76-186 252-365 (366)
223 KOG2532 Permease of the major 98.7 7.3E-08 1.6E-12 88.7 10.2 164 55-219 263-445 (466)
224 TIGR01301 GPH_sucrose GPH fami 98.7 1.3E-06 2.9E-11 80.6 18.2 137 88-224 308-475 (477)
225 PRK11462 putative transporter; 98.7 2.6E-06 5.7E-11 79.1 20.2 111 85-195 263-382 (460)
226 TIGR00885 fucP L-fucose:H+ sym 98.7 9E-07 1.9E-11 81.0 16.6 124 71-197 253-378 (410)
227 KOG3762 Predicted transporter 98.7 4.3E-08 9.2E-13 88.7 7.5 144 76-219 397-545 (618)
228 PF03209 PUCC: PUCC protein; 98.7 5.5E-06 1.2E-10 73.5 19.9 140 77-216 236-393 (403)
229 PRK10207 dipeptide/tripeptide 98.6 3.1E-06 6.7E-11 79.2 17.1 109 87-195 311-436 (489)
230 PF05978 UNC-93: Ion channel r 98.6 3.7E-06 8E-11 65.3 14.1 112 82-194 34-145 (156)
231 COG2270 Permeases of the major 98.6 1E-05 2.2E-10 71.8 18.3 213 86-329 59-299 (438)
232 KOG3764 Vesicular amine transp 98.5 6.6E-07 1.4E-11 78.4 9.1 164 48-215 272-448 (464)
233 PF06609 TRI12: Fungal trichot 98.5 1.7E-06 3.7E-11 81.4 12.1 142 86-227 350-560 (599)
234 PRK15403 multidrug efflux syst 98.4 3.1E-05 6.8E-10 71.0 17.9 133 76-209 245-385 (413)
235 PF12832 MFS_1_like: MFS_1 lik 98.4 1.8E-06 3.8E-11 58.6 7.1 61 64-124 14-74 (77)
236 KOG0637 Sucrose transporter an 98.4 7.1E-07 1.5E-11 79.5 6.4 130 71-200 53-205 (498)
237 PF03092 BT1: BT1 family; Int 98.3 2.2E-05 4.9E-10 72.2 15.7 151 71-222 11-177 (433)
238 COG0738 FucP Fucose permease [ 98.3 2E-05 4.3E-10 69.6 14.2 125 70-197 256-381 (422)
239 TIGR00769 AAA ADP/ATP carrier 98.3 0.00031 6.8E-09 64.8 21.6 126 72-197 25-188 (472)
240 PTZ00207 hypothetical protein; 98.2 2.5E-05 5.3E-10 74.0 13.8 143 73-217 376-548 (591)
241 KOG2533 Permease of the major 98.2 1.1E-05 2.4E-10 74.7 11.2 148 58-205 281-440 (495)
242 KOG2816 Predicted transporter 98.2 0.00013 2.7E-09 67.4 17.7 121 76-197 268-389 (463)
243 KOG0255 Synaptic vesicle trans 98.2 7E-05 1.5E-09 70.9 15.8 133 93-225 358-497 (521)
244 KOG2615 Permease of the major 98.0 9.7E-05 2.1E-09 64.8 12.0 121 77-197 289-411 (451)
245 PRK15462 dipeptide/tripeptide 97.9 0.00075 1.6E-08 62.9 16.3 110 87-196 310-436 (493)
246 PF06963 FPN1: Ferroportin1 (F 97.9 0.00039 8.5E-09 63.4 14.1 129 69-197 277-415 (432)
247 KOG3098 Uncharacterized conser 97.9 0.0018 3.9E-08 59.3 18.0 103 91-194 56-158 (461)
248 KOG3098 Uncharacterized conser 97.8 0.0038 8.2E-08 57.2 18.4 109 87-196 281-410 (461)
249 PF03092 BT1: BT1 family; Int 97.6 0.0012 2.6E-08 60.9 13.4 143 82-224 252-416 (433)
250 PF02487 CLN3: CLN3 protein; 97.6 0.001 2.2E-08 59.8 11.7 112 84-197 280-394 (402)
251 PF00854 PTR2: POT family; In 97.5 0.0012 2.7E-08 59.6 11.9 104 116-219 2-121 (372)
252 PF02487 CLN3: CLN3 protein; 97.4 0.0015 3.2E-08 58.8 10.6 129 89-222 63-197 (402)
253 PF06963 FPN1: Ferroportin1 (F 97.4 0.033 7.2E-07 51.0 19.4 149 67-215 19-194 (432)
254 KOG3574 Acetyl-CoA transporter 97.4 0.02 4.4E-07 50.6 16.4 133 59-194 40-189 (510)
255 KOG1237 H+/oligopeptide sympor 97.3 0.0069 1.5E-07 57.6 14.1 149 69-217 57-241 (571)
256 PRK03612 spermidine synthase; 97.2 0.047 1E-06 51.6 18.7 120 76-197 41-168 (521)
257 PF03219 TLC: TLC ATP/ADP tran 97.1 0.22 4.8E-06 46.5 23.3 112 86-197 59-203 (491)
258 KOG3810 Micronutrient transpor 97.1 0.0032 6.9E-08 54.8 8.7 149 78-227 34-189 (433)
259 KOG2563 Permease of the major 97.1 0.0048 1E-07 55.6 9.5 108 79-186 295-407 (480)
260 COG3104 PTR2 Dipeptide/tripept 97.0 0.049 1.1E-06 50.0 16.1 130 86-215 325-481 (498)
261 KOG4332 Predicted sugar transp 97.0 0.0015 3.3E-08 54.8 5.2 102 70-174 57-159 (454)
262 KOG3762 Predicted transporter 96.9 0.0011 2.3E-08 61.0 4.4 78 58-135 19-97 (618)
263 PF13000 Acatn: Acetyl-coenzym 96.7 0.028 6.1E-07 51.6 11.9 139 56-194 6-174 (544)
264 KOG1330 Sugar transporter/spin 96.6 0.01 2.2E-07 53.8 8.2 119 78-196 276-408 (493)
265 COG3202 ATP/ADP translocase [E 96.1 1.1 2.5E-05 41.3 24.0 126 72-197 45-207 (509)
266 TIGR00939 2a57 Equilibrative N 95.8 0.16 3.5E-06 46.9 11.9 127 93-224 53-199 (437)
267 KOG1479 Nucleoside transporter 95.8 0.4 8.7E-06 43.2 13.9 86 138-224 117-207 (406)
268 TIGR00939 2a57 Equilibrative N 95.8 0.18 3.8E-06 46.6 12.2 106 88-194 310-428 (437)
269 PF01770 Folate_carrier: Reduc 95.2 0.48 1E-05 43.0 12.3 94 87-180 287-382 (412)
270 KOG2325 Predicted transporter/ 95.1 0.042 9E-07 50.8 5.4 66 146-211 396-465 (488)
271 PF03137 OATP: Organic Anion T 95.0 0.0067 1.5E-07 57.4 0.0 133 65-197 320-511 (539)
272 TIGR00805 oat sodium-independe 94.9 0.069 1.5E-06 51.9 6.9 60 72-131 352-415 (633)
273 KOG3097 Predicted membrane pro 93.9 0.28 6E-06 42.8 7.3 73 95-168 68-140 (390)
274 KOG1479 Nucleoside transporter 93.7 0.87 1.9E-05 41.1 10.5 107 87-194 284-399 (406)
275 PF01733 Nucleoside_tran: Nucl 92.0 0.053 1.1E-06 47.7 0.5 105 90-194 187-304 (309)
276 KOG3880 Predicted small molecu 90.3 0.32 7E-06 42.0 3.4 110 86-197 289-401 (409)
277 TIGR00806 rfc RFC reduced fola 89.5 6.7 0.00014 36.7 11.5 96 88-183 301-398 (511)
278 COG5336 Uncharacterized protei 89.1 1.8 3.9E-05 30.8 5.8 22 91-112 48-69 (116)
279 KOG3810 Micronutrient transpor 86.8 8.1 0.00018 34.4 9.7 95 88-182 274-370 (433)
280 KOG0637 Sucrose transporter an 85.8 0.64 1.4E-05 42.5 2.7 78 88-165 335-412 (498)
281 KOG4332 Predicted sugar transp 85.2 19 0.00041 31.0 10.7 129 87-215 284-425 (454)
282 KOG3626 Organic anion transpor 84.6 2.5 5.4E-05 41.4 6.2 60 72-131 414-477 (735)
283 COG1230 CzcD Co/Zn/Cd efflux s 83.9 28 0.00061 30.2 12.0 145 47-202 22-187 (296)
284 PF06912 DUF1275: Protein of u 82.5 25 0.00055 28.7 16.1 25 175-199 167-191 (209)
285 PF07672 MFS_Mycoplasma: Mycop 81.9 2 4.4E-05 36.3 3.9 51 170-220 2-61 (267)
286 COG4262 Predicted spermidine s 81.4 30 0.00065 31.0 10.8 85 81-165 39-132 (508)
287 TIGR00880 2_A_01_02 Multidrug 81.0 14 0.00029 27.0 8.1 42 87-128 89-130 (141)
288 PF12832 MFS_1_like: MFS_1 lik 80.9 3.8 8.3E-05 27.5 4.4 39 293-331 10-48 (77)
289 PF11947 DUF3464: Protein of u 78.6 28 0.0006 26.9 8.8 51 137-190 96-146 (153)
290 PRK10263 DNA translocase FtsK; 77.9 40 0.00087 35.6 12.0 22 93-114 60-81 (1355)
291 KOG3880 Predicted small molecu 77.5 3.2 6.9E-05 36.2 3.7 127 88-221 65-200 (409)
292 PF07672 MFS_Mycoplasma: Mycop 75.2 52 0.0011 28.1 10.9 101 88-189 144-254 (267)
293 PF13000 Acatn: Acetyl-coenzym 68.5 1.1E+02 0.0024 29.0 12.1 47 141-187 408-454 (544)
294 PF01733 Nucleoside_tran: Nucl 68.4 1.6 3.5E-05 38.3 0.0 74 146-224 5-87 (309)
295 PF07857 DUF1632: CEO family ( 64.9 15 0.00033 31.1 5.1 24 199-222 114-137 (254)
296 PF11299 DUF3100: Protein of u 61.9 9.5 0.00021 31.5 3.2 96 76-193 130-225 (241)
297 COG2233 UraA Xanthine/uracil p 60.5 82 0.0018 29.3 9.2 99 76-175 40-142 (451)
298 TIGR00926 2A1704 Peptide:H+ sy 57.8 73 0.0016 31.4 9.0 79 138-216 565-647 (654)
299 KOG2765 Predicted membrane pro 56.9 62 0.0013 29.1 7.4 80 87-170 188-273 (416)
300 TIGR00769 AAA ADP/ATP carrier 56.9 1.8E+02 0.0038 27.5 16.5 68 145-212 273-345 (472)
301 TIGR00801 ncs2 uracil-xanthine 56.3 1.2E+02 0.0027 27.9 9.9 100 76-176 29-132 (415)
302 TIGR03173 pbuX xanthine permea 53.9 1.4E+02 0.0029 27.5 9.8 97 77-174 20-117 (406)
303 PRK10697 DNA-binding transcrip 51.7 26 0.00057 25.7 3.8 13 214-226 57-69 (118)
304 TIGR01667 YCCS_YHJK integral m 50.9 2.6E+02 0.0057 27.9 11.6 45 112-156 54-99 (701)
305 PF02632 BioY: BioY family; I 49.5 1E+02 0.0023 23.7 7.0 25 91-115 59-83 (148)
306 PRK14229 camphor resistance pr 47.6 1.1E+02 0.0023 22.2 8.1 25 145-169 56-80 (108)
307 COG1288 Predicted membrane pro 47.1 1.9E+02 0.0042 26.8 9.1 23 195-217 214-236 (481)
308 PF02535 Zip: ZIP Zinc transpo 47.0 1.9E+02 0.0042 25.1 14.2 33 139-171 261-294 (317)
309 TIGR02230 ATPase_gene1 F0F1-AT 46.6 1E+02 0.0023 21.9 6.7 21 101-121 59-79 (100)
310 COG1422 Predicted membrane pro 46.4 1.6E+02 0.0035 23.9 9.1 22 184-206 32-53 (201)
311 COG1268 BioY Uncharacterized c 46.2 1.4E+02 0.0031 23.9 7.4 23 92-114 89-111 (184)
312 COG1575 MenA 1,4-dihydroxy-2-n 45.5 2.1E+02 0.0046 25.0 12.1 55 158-212 133-187 (303)
313 PLN02601 beta-carotene hydroxy 43.8 2.1E+02 0.0045 24.5 8.8 19 94-112 139-157 (303)
314 KOG4830 Predicted sugar transp 43.8 18 0.00039 30.9 2.1 43 76-118 43-94 (412)
315 COG3619 Predicted membrane pro 43.7 1.9E+02 0.0042 24.1 17.6 29 86-114 56-84 (226)
316 PRK10692 hypothetical protein; 43.2 1E+02 0.0022 21.1 5.2 16 114-129 3-18 (92)
317 KOG3312 Predicted membrane pro 43.1 1.2E+02 0.0025 23.3 6.0 34 214-247 24-57 (186)
318 TIGR00836 amt ammonium transpo 42.7 2.7E+02 0.0059 25.6 11.8 49 146-194 283-331 (403)
319 PF07760 DUF1616: Protein of u 42.6 2.3E+02 0.0049 24.6 9.7 56 141-197 22-77 (287)
320 TIGR00267 conserved hypothetic 41.6 1.6E+02 0.0035 23.2 7.2 47 69-122 104-150 (169)
321 KOG3574 Acetyl-CoA transporter 41.0 1.6E+02 0.0034 27.1 7.5 44 145-188 376-419 (510)
322 PF02694 UPF0060: Uncharacteri 39.3 61 0.0013 23.3 3.9 48 85-132 54-101 (107)
323 PF03219 TLC: TLC ATP/ADP tran 38.9 3.5E+02 0.0075 25.7 16.6 65 145-209 289-358 (491)
324 PTZ00101 rhomboid-1 protease; 38.7 2.6E+02 0.0056 24.2 16.1 39 96-134 119-158 (278)
325 COG3086 RseC Positive regulato 38.1 1.8E+02 0.004 22.2 7.1 40 79-118 66-105 (150)
326 PRK11715 inner membrane protei 37.6 2.9E+02 0.0063 25.7 9.0 20 114-133 383-402 (436)
327 PF01405 PsbT: Photosystem II 37.6 62 0.0013 17.1 2.8 13 213-225 16-28 (29)
328 PF10785 NADH-u_ox-rdase: NADH 37.6 1.4E+02 0.003 20.6 5.5 40 99-138 32-78 (86)
329 PRK07419 1,4-dihydroxy-2-napht 37.5 2.9E+02 0.0062 24.3 12.8 30 161-190 134-163 (304)
330 PF10762 DUF2583: Protein of u 37.0 1.2E+02 0.0027 20.6 4.8 16 114-129 3-18 (89)
331 COG5547 Small integral membran 37.0 1.1E+02 0.0023 19.2 4.7 39 115-153 8-46 (62)
332 PF12805 FUSC-like: FUSC-like 36.5 2.8E+02 0.0061 23.9 14.3 36 119-154 3-39 (284)
333 TIGR01666 YCCS hypothetical me 36.3 4.6E+02 0.0099 26.3 15.3 108 105-225 43-159 (704)
334 PF06123 CreD: Inner membrane 36.1 3.3E+02 0.0073 25.3 9.2 11 80-90 321-331 (430)
335 KOG1237 H+/oligopeptide sympor 36.0 96 0.0021 30.0 6.0 59 137-195 457-515 (571)
336 PRK03612 spermidine synthase; 36.0 2.3E+02 0.005 27.0 8.5 48 84-131 144-193 (521)
337 PF11151 DUF2929: Protein of u 35.6 1.1E+02 0.0025 19.1 5.0 38 186-223 18-55 (57)
338 TIGR00930 2a30 K-Cl cotranspor 35.3 5.4E+02 0.012 26.9 16.6 21 185-205 505-525 (953)
339 PRK02237 hypothetical protein; 35.0 1.2E+02 0.0025 22.0 4.7 47 86-132 57-103 (109)
340 PF06645 SPC12: Microsomal sig 34.7 1.4E+02 0.0031 20.0 5.5 13 99-111 21-33 (76)
341 COG4769 Predicted membrane pro 33.7 1.3E+02 0.0028 23.6 5.1 51 94-150 82-132 (181)
342 PF00854 PTR2: POT family; In 33.5 1.3E+02 0.0027 27.1 6.2 60 76-135 58-122 (372)
343 PRK11875 psbT photosystem II r 33.1 78 0.0017 16.9 2.7 12 214-225 17-28 (31)
344 PF08570 DUF1761: Protein of u 33.1 2E+02 0.0043 21.2 9.7 35 51-86 3-37 (126)
345 PF00860 Xan_ur_permease: Perm 32.6 79 0.0017 28.8 4.7 94 79-176 28-128 (389)
346 TIGR00844 c_cpa1 na(+)/h(+) an 32.3 5.5E+02 0.012 26.1 11.9 12 198-209 129-140 (810)
347 PRK14230 camphor resistance pr 32.2 2.1E+02 0.0045 21.1 8.3 24 145-168 60-83 (119)
348 PF04281 Tom22: Mitochondrial 30.9 1.4E+02 0.003 22.7 4.9 25 163-187 60-84 (137)
349 COG3162 Predicted membrane pro 30.8 2E+02 0.0043 20.4 5.6 62 270-333 13-75 (102)
350 PF04341 DUF485: Protein of un 30.6 1.6E+02 0.0035 20.4 5.0 48 286-333 19-67 (91)
351 TIGR00986 3a0801s05tom22 mitoc 30.0 1.6E+02 0.0035 22.5 5.1 26 162-187 57-82 (145)
352 CHL00031 psbT photosystem II p 29.4 91 0.002 17.0 2.6 12 214-225 17-28 (33)
353 KOG1277 Endosomal membrane pro 29.3 83 0.0018 29.1 4.0 43 87-129 325-374 (593)
354 PF07857 DUF1632: CEO family ( 28.0 2.9E+02 0.0062 23.6 6.9 18 48-65 181-198 (254)
355 PF00909 Ammonium_transp: Ammo 27.0 4.9E+02 0.011 23.8 15.5 51 145-195 277-327 (399)
356 PF04550 Phage_holin_2: Phage 26.6 2.1E+02 0.0045 19.8 4.6 32 137-168 30-61 (89)
357 PF13829 DUF4191: Domain of un 26.5 2.2E+02 0.0048 23.7 5.7 48 198-245 50-99 (224)
358 COG2119 Predicted membrane pro 26.3 3.3E+02 0.0072 21.9 6.4 36 94-129 143-178 (190)
359 PF06123 CreD: Inner membrane 26.2 5.4E+02 0.012 24.0 12.0 68 106-177 312-384 (430)
360 COG2610 GntT H+/gluconate symp 24.6 5.8E+02 0.013 23.8 9.7 43 74-119 49-100 (442)
361 PF15061 DUF4538: Domain of un 23.9 69 0.0015 20.1 1.8 20 198-217 4-23 (58)
362 KOG2881 Predicted membrane pro 22.9 4.9E+02 0.011 22.3 8.1 16 96-111 69-84 (294)
363 PRK14199 camphor resistance pr 22.7 3.3E+02 0.0072 20.3 9.5 25 145-169 69-93 (128)
364 PRK04201 zinc transporter ZupT 22.7 4.9E+02 0.011 22.2 8.2 16 107-122 173-188 (265)
365 PF05232 BTP: Bacterial Transm 22.3 2.1E+02 0.0046 18.5 4.1 44 72-115 21-64 (67)
366 PRK10666 ammonium transporter; 22.3 6.4E+02 0.014 23.5 12.2 49 146-194 307-355 (428)
367 TIGR00927 2A1904 K+-dependent 22.2 1.8E+02 0.004 29.9 5.2 43 73-117 956-998 (1096)
368 KOG1287 Amino acid transporter 21.9 6.9E+02 0.015 23.7 13.9 109 120-229 338-451 (479)
369 PF08997 UCR_6-4kD: Ubiquinol- 21.6 1.6E+02 0.0035 18.4 3.1 36 166-201 5-40 (56)
370 COG1380 Putative effector of m 20.8 1.9E+02 0.004 21.7 3.9 40 75-114 77-116 (128)
371 PRK14200 camphor resistance pr 20.7 3.7E+02 0.008 20.1 9.5 25 145-169 69-93 (127)
372 PF12273 RCR: Chitin synthesis 20.3 35 0.00077 25.5 0.1 16 200-215 1-16 (130)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.2e-30 Score=231.72 Aligned_cols=283 Identities=31% Similarity=0.536 Sum_probs=232.7
Q ss_pred CCChhhHHHHHHHHHhhhhhhccccccchhhHhHh--------hhcc--CCchh----HHHHHHHHHHHHHHHHHHHHHH
Q 019729 43 DGSVSVVFCVLVVALGPIQFGFTCGYSSPTQAEII--------SDLK--LTISE----FSIFGSLANVGAMVGAIASGQI 108 (336)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g--~s~~~----~~~~~~~~~~~~~~~~~~~g~l 108 (336)
+..++.......++++.+..||..+.+++..+.+. +.+| .++++ .+.+.+++.+|.++|+++.+++
T Consensus 4 ~~t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~l 83 (485)
T KOG0569|consen 4 KLTRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLL 83 (485)
T ss_pred CccHHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456777777788888999999999988765443 3456 33332 5788999999999999999999
Q ss_pred HhhhchhHHHHHHHHHHHHHHHHHHh---hcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHH
Q 019729 109 AEYIGRKGSLMIAAVPNIIGWLIISF---SKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTI 185 (336)
Q Consensus 109 ~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 185 (336)
+||+|||..++++.++..++.+++.+ .+++.+++++|++.|+..|......+.|+.|..|++.||....+.+.+..+
T Consensus 84 a~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~ 163 (485)
T KOG0569|consen 84 ADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVI 163 (485)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHH
Confidence 99999999999998888877777665 467889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc------cchhHHHHHHhHHHHHHHHHHhhcccCchhHHHH-cCChHHHHHHHHHHhCCChhhHHHHHHHH
Q 019729 186 GIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK-MGMTEDFESSLQVLRGFDTDISIEVNEIK 258 (336)
Q Consensus 186 g~~~~~~~~~------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (336)
|..++..++. .-.|++.+.+..+++++.++.+.++||||+|+.. +++.+||+++++.+++.+++..+..++.+
T Consensus 164 g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~ 243 (485)
T KOG0569|consen 164 GILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLR 243 (485)
T ss_pred HHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHH
Confidence 9999977762 2269999999999999999999999999999987 89999999999999998743333222222
Q ss_pred HHhh-hhchhhhhhHHHHhccc-chHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCcchhHHHH
Q 019729 259 RSVA-SSSRRTAIRFAELKRKR-YWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANAGKINISLDVILP 325 (336)
Q Consensus 259 ~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 325 (336)
+..+ +.+++++.++.++++++ .+++..+++.+...+++.|.+.+.+|...++++.|++..++.++-.
T Consensus 244 e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~ 312 (485)
T KOG0569|consen 244 EIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANL 312 (485)
T ss_pred HHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHH
Confidence 2222 22233667899999885 5666777888899999999999999999999999999877765543
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=3.2e-29 Score=239.44 Aligned_cols=267 Identities=24% Similarity=0.282 Sum_probs=217.2
Q ss_pred ChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 019729 45 SVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVP 124 (336)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 124 (336)
.+..|.+++++.++.+..+++...++..+|.+.+++|++..+.+++.+++.++.+++++++|+++||+|||++++++.++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 46677788888888888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc--------
Q 019729 125 NIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF-------- 196 (336)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~-------- 196 (336)
.+++.++++++++++.++++|++.|++.|+..++..++++|++|+++|++..+++..++.+|.++++.++..
T Consensus 242 ~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~ 321 (742)
T TIGR01299 242 NGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWS 321 (742)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 999999999999999999999999999999999999999999999999999999999999999888875421
Q ss_pred ---------chhHHHHHHhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhh---HHH---HHHHHHHh
Q 019729 197 ---------VNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDI---SIE---VNEIKRSV 261 (336)
Q Consensus 197 ---------~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~ 261 (336)
.+||+.+++.+++.++.++..+++||+|+|+..+++.+++.+.+++++..+... +.. .++.+...
T Consensus 322 ~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~ 401 (742)
T TIGR01299 322 FQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIH 401 (742)
T ss_pred hccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhh
Confidence 269999999888888888888889999999999999999999999887654211 111 01111000
Q ss_pred h--------hhch---------------hhhhhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHh
Q 019729 262 A--------SSSR---------------RTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFAN 312 (336)
Q Consensus 262 ~--------~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (336)
. .... .....++++++++.+++.++ +++.+++...+++++..|+|.++++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~-l~~~wf~~~~~yygl~~w~P~~~~~ 474 (742)
T TIGR01299 402 QEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIK-LMGVWFTLSFGYYGLSVWFPDMIKH 474 (742)
T ss_pred hhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 00113566777666666555 4555666777899999999998765
No 3
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=1.1e-28 Score=231.13 Aligned_cols=288 Identities=36% Similarity=0.601 Sum_probs=233.7
Q ss_pred ChhhHHHHHHHHHhhhhhhcc--ccccchhhHhHhhhcc-----CCc--hhHHHHHHHHHHHHHHHHHHHHHHHhhhchh
Q 019729 45 SVSVVFCVLVVALGPIQFGFT--CGYSSPTQAEIISDLK-----LTI--SEFSIFGSLANVGAMVGAIASGQIAEYIGRK 115 (336)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g-----~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 115 (336)
.............+.+..+++ .+..++....+.++.. .+. .+.+|+.++..++..+++++.|+++|++|||
T Consensus 40 ~~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk 119 (513)
T KOG0254|consen 40 SPFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRK 119 (513)
T ss_pred ceehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 345556666667777777775 5666777666666422 122 2448999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhc
Q 019729 116 GSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 195 (336)
Q Consensus 116 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 195 (336)
+.++++.+.+.++.+++++++|+.+++++|++.|+|.|....+.+.|++|..|++.||...+..+....+|..++..++.
T Consensus 120 ~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~ 199 (513)
T KOG0254|consen 120 KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINY 199 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred cc-----hhHHHHHHhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCC-ChhhHHHHHHHHHH-hhhh-chh
Q 019729 196 FV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGF-DTDISIEVNEIKRS-VASS-SRR 267 (336)
Q Consensus 196 ~~-----~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~-~~~ 267 (336)
.. +||..+.+..+++++..+..+++||+|+|+.++++.+++++.++++++. +.+.+.+.++.+.. ..+. ..+
T Consensus 200 ~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (513)
T KOG0254|consen 200 GTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAE 279 (513)
T ss_pred hhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccc
Confidence 65 6999999999999988888889999999999999999999999999993 34444444444411 1111 111
Q ss_pred hhhhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCC--cchhHHHHHHHHhhh
Q 019729 268 TAIRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANAGKIN--ISLDVILPIVEALNS 332 (336)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~g~ 332 (336)
.+..+.+++++..+++.++++.+..+++++|++.+.+|.+.+++..|.+. .....+++..+.++.
T Consensus 280 ~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t 346 (513)
T KOG0254|consen 280 GKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGT 346 (513)
T ss_pred ccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 22246677776688888999999999999999999999999999998874 344555555555543
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=8.1e-28 Score=225.12 Aligned_cols=271 Identities=17% Similarity=0.185 Sum_probs=203.6
Q ss_pred CChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhc-----cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHH
Q 019729 44 GSVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDL-----KLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSL 118 (336)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l 118 (336)
..+..+.++.++.++.+.++++....+...|.+..++ +.+..+.+++.+...++..++++++|+++||+|||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~ 89 (502)
T TIGR00887 10 FGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY 89 (502)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 3456667778888889999999999998888776642 34556678999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcc------hhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHH
Q 019729 119 MIAAVPNIIGWLIISFSKD------SSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL 192 (336)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 192 (336)
.++.++.+++.++++++++ ++.++++|++.|++.|...+..+.+++|++|+++|+++.++.+....+|.++++.
T Consensus 90 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~ 169 (502)
T TIGR00887 90 GMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAI 169 (502)
T ss_pred HHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888765 6789999999999999999999999999999999999999999999988888876
Q ss_pred hhcc---------------------------chhHHHHHHhHHHHHHHHHHhhcccCchhHHHHcCChH-HHHHHHHHHh
Q 019729 193 LGLF---------------------------VNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTE-DFESSLQVLR 244 (336)
Q Consensus 193 ~~~~---------------------------~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~ 244 (336)
++.. .+||+.+.+.++++++.++..+++||||+|+..+++.+ ++.+.+++.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~ 249 (502)
T TIGR00887 170 VALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVL 249 (502)
T ss_pred HHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHh
Confidence 6521 26999999988888888888889999999998877764 4666666655
Q ss_pred CCChh-hHHHHHHHHHHhhhhchhhhhhHHHHhccc---chHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCc
Q 019729 245 GFDTD-ISIEVNEIKRSVASSSRRTAIRFAELKRKR---YWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANAGKINI 318 (336)
Q Consensus 245 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 318 (336)
..+.+ ..++.++.++ +++..+.+++++++++ ..++..+.+...++.+...++....|.|.++++.|++..
T Consensus 250 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~ 323 (502)
T TIGR00887 250 QVKIEAEPDEVEKAST----AVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPP 323 (502)
T ss_pred ccccccCcccccchhc----cccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCC
Confidence 43211 1111111111 1111123566776542 122233333333333333456677789999998898754
No 5
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=1e-26 Score=216.66 Aligned_cols=272 Identities=30% Similarity=0.433 Sum_probs=204.4
Q ss_pred hhhHHHHHHHHHhhhhhhccccccchhhHhHhhhc--------cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHH
Q 019729 46 VSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDL--------KLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGS 117 (336)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~ 117 (336)
+.....++++.++.+..+++...+++..+.+++++ +.+..+.+++.+++.++..++++++|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 44566777777888999999999999989888877 8888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh------------cchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHH
Q 019729 118 LMIAAVPNIIGWLIISFS------------KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTI 185 (336)
Q Consensus 118 l~~~~~~~~~~~~~~~~~------------~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 185 (336)
++++.++++++.+++++. +.+..+++.|+++|++.|...+...++++|++|+++|++++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 999999999888887763 22456789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc------------cchhHHHHHHhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHH
Q 019729 186 GIMLAYLLGL------------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIE 253 (336)
Q Consensus 186 g~~~~~~~~~------------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (336)
|.++++.++. ..+||+.|++.+++.++..+..+++||+|+++..+++.+++.+..++.++..+ ....
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~ 246 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL-ATQA 246 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh-HHHH
Confidence 9998877643 23899999998888777776777899999998888877777666666554331 1111
Q ss_pred HHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCcchhHH
Q 019729 254 VNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANAGKINISLDVI 323 (336)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 323 (336)
.++.++...++ .......+. .........+....+.+..+++...+|.|.++++.|++.......
T Consensus 247 ~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~ 311 (479)
T PRK10077 247 LQEIKHSLDHG----RKTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQ 311 (479)
T ss_pred HHHHHHHHHHh----hhhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHH
Confidence 11111111000 000111111 111122333334455566667778889999999889886655443
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=2.9e-26 Score=212.96 Aligned_cols=285 Identities=34% Similarity=0.576 Sum_probs=211.1
Q ss_pred CChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCC--------chhHHHHHHHHHHHHHHHHHHHHHHHhhhchh
Q 019729 44 GSVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLT--------ISEFSIFGSLANVGAMVGAIASGQIAEYIGRK 115 (336)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s--------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 115 (336)
..++.+...+++.++.+..+++.....+..+.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr 101 (481)
T TIGR00879 22 TYWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRK 101 (481)
T ss_pred ccHHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhH
Confidence 3355566666677777888888888888888888888777 78899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHH
Q 019729 116 GSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL 192 (336)
Q Consensus 116 ~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 192 (336)
++++++.++.+++.+++.+.. +++.+++.|++.|++.+...+....++.|++|+++|+++.++.+.+..+|.++++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~ 181 (481)
T TIGR00879 102 KSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYG 181 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999998886644 34588999999999999999999999999999999999999999999999999999
Q ss_pred hh---cc----chhHHHHHHhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHH---HHHhh
Q 019729 193 LG---LF----VNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEI---KRSVA 262 (336)
Q Consensus 193 ~~---~~----~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 262 (336)
++ .. .+||+.|++.++..++.++..+++||+|+++..+++.+++.+..++.+..+++.....++. ....+
T Consensus 182 ~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (481)
T TIGR00879 182 FGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRS 261 (481)
T ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHH
Confidence 98 33 3899999997777777777777899999887777666665555554443332211111110 00000
Q ss_pred hhchhhhhhHHHHhccc--chHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCcchhHHHHHHH
Q 019729 263 SSSRRTAIRFAELKRKR--YWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANAGKINISLDVILPIVE 328 (336)
Q Consensus 263 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 328 (336)
.+.+..+..+.+.++.. ..++.++...+.++....+.+.+.+|.|.++++.|++..+++.......
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 329 (481)
T TIGR00879 262 IEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVG 329 (481)
T ss_pred HHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHH
Confidence 01111111233333321 2345555556666666666677888999999999998866655544433
No 7
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=9.9e-28 Score=207.93 Aligned_cols=273 Identities=15% Similarity=0.134 Sum_probs=211.0
Q ss_pred ccCCChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHH
Q 019729 41 LRDGSVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMI 120 (336)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 120 (336)
.+..++.++.+...+.+++..+++.+-.++...|.+.++.++|.+|.|++.+.+.+.+.++.++.|.++||.+.|+.+.+
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~ 99 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehH
Confidence 44455667778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh--ccc-
Q 019729 121 AAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG--LFV- 197 (336)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~~- 197 (336)
++++.++.+++++++++.+.+.+..++.|..+|..+|.+...+..|+|+++||+..++++.+.++|+.+.|++. +.+
T Consensus 100 gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888877 444
Q ss_pred ---hhHHHHHHhHHHHHHH-HHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhh-chhhhhhH
Q 019729 198 ---NWRVLAVLGVLPCTLL-IPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASS-SRRTAIRF 272 (336)
Q Consensus 198 ---~w~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 272 (336)
+||..|++.++++++. +++++..+|+|+.. .-...|| .+++. .+.. +++.+.+ -...+.-.
T Consensus 180 ~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~-GLP~ie~-------~~~d~---~e~~---~~~~~~~~ls~~~i~~ 245 (448)
T COG2271 180 FHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSE-GLPPIEE-------YRGDP---LEIY---EEEKENEGLTAWQIFV 245 (448)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhCCCcccc-CCCCHHH-------hhcCc---hhhh---hhhccCCCccHHHHHH
Confidence 8999999999887776 45566788888621 0001111 11100 0000 0000000 01112233
Q ss_pred HHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhc-CCCCcchhHHHHHHHHhh
Q 019729 273 AELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANA-GKINISLDVILPIVEALN 331 (336)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~g 331 (336)
+-+++||. ++.+++..+.....-+++..|.|.|+.|. |++..++....+.+...|
T Consensus 246 ~YVL~Nk~----iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~ag 301 (448)
T COG2271 246 KYVLKNKL----IWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAG 301 (448)
T ss_pred HHHHcChH----HHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 34455544 33334444444445678999999999888 999988888877665543
No 8
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=3.1e-26 Score=209.16 Aligned_cols=178 Identities=17% Similarity=0.209 Sum_probs=159.2
Q ss_pred hHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHH
Q 019729 48 VVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNII 127 (336)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 127 (336)
.|....+++++++..+++....+...|.+++++|++..+.+++.+++.+++.+++++.|+++||+|||+++..+.++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 44556666667777788888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc----------c
Q 019729 128 GWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF----------V 197 (336)
Q Consensus 128 ~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~----------~ 197 (336)
+.++++++++++.+++.|++.|++.+...+....++.|++|+++|+++.++++.+..+|.++++.+++. .
T Consensus 86 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 165 (412)
T TIGR02332 86 ASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALK 165 (412)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999888743 3
Q ss_pred hhHHHHHHhHHHHHHH-HHHhhcccCchh
Q 019729 198 NWRVLAVLGVLPCTLL-IPGLFFIPESPR 225 (336)
Q Consensus 198 ~w~~~~~~~~~~~~~~-~~~~~~~~e~~~ 225 (336)
+||+.|++.+++.++. .+.++++||+|+
T Consensus 166 gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 166 GWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred chhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 8999999988777655 445567899884
No 9
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3.3e-26 Score=200.79 Aligned_cols=244 Identities=18% Similarity=0.212 Sum_probs=195.2
Q ss_pred hhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHH
Q 019729 46 VSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPN 125 (336)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 125 (336)
+..+..++.+.++.|..+.........+|++.+|+|+|....|++.++|.++..++.++...+.||+.||++++..+.++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 34455666677778888889899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHH
Q 019729 126 IIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRV 201 (336)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~ 201 (336)
.++++++++++||+.++++|++.|+..|.++++..++..+..|+++|++++++...+..++.++|.+++.++ |||+
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 999999999999999999999999999999999999999999999999999999999999888887777554 9999
Q ss_pred HHHHhHHHHHHHHHH-hhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccc
Q 019729 202 LAVLGVLPCTLLIPG-LFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRY 280 (336)
Q Consensus 202 ~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (336)
.|++.+.++++.++. +..+| |+.. +++......+..++++++.
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP--~~~~----------------------------------~~~~~~~~~~~~~~l~~p~ 212 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLP--PSEI----------------------------------SGSLPGPLRTLLRLLRRPG 212 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CccC----------------------------------CCCCCcchhHHHHHhcCch
Confidence 999999998888664 55677 2100 0001111223456667665
Q ss_pred hHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhc-CCCCcchhHHHHHHHH
Q 019729 281 WFPLMIGIGLLVLQQLSGINGVLFYSSNIFANA-GKINISLDVILPIVEA 329 (336)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~ 329 (336)
.+..++...+. +.+.+....|+..++++. |++....++++-.+++
T Consensus 213 v~~~l~~t~l~----~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv 258 (394)
T COG2814 213 VLLGLLATFLF----MTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGI 258 (394)
T ss_pred HHHHHHHHHHH----HcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHH
Confidence 55544443333 334555666665555555 9998888877644443
No 10
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.95 E-value=3.9e-25 Score=201.31 Aligned_cols=182 Identities=22% Similarity=0.273 Sum_probs=163.5
Q ss_pred hhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHH
Q 019729 46 VSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPN 125 (336)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 125 (336)
++.|.....+.++.+..+++....++..|.+++++|++..+.+++.++..++..+++++.|+++||+|||++++++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~ 87 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLF 87 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 45566667777888888889888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----h--h
Q 019729 126 IIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----N--W 199 (336)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~--w 199 (336)
+++.++++++++++.+++.|++.|++.+..++...+++.|++|+++|+++.++.+.+..+|.++++.++..+ + |
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w 167 (405)
T TIGR00891 88 SAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGW 167 (405)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccH
Confidence 999999999999999999999999999999999999999999999999999999999999999998887544 4 9
Q ss_pred HHHHHHhHHHHHHHHHHhhcccCchhHH
Q 019729 200 RVLAVLGVLPCTLLIPGLFFIPESPRWL 227 (336)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 227 (336)
|+.+++.+++.++.++....+||++++.
T Consensus 168 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 195 (405)
T TIGR00891 168 RALFFISILPIIFALWLRKNIPEAEDWK 195 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhHH
Confidence 9999987777766666666788887644
No 11
>TIGR00898 2A0119 cation transport protein.
Probab=99.95 E-value=8.5e-26 Score=211.93 Aligned_cols=225 Identities=25% Similarity=0.417 Sum_probs=182.2
Q ss_pred hhhHhHhhhccCC---chhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 019729 71 PTQAEIISDLKLT---ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLL 147 (336)
Q Consensus 71 ~~~~~~~~~~g~s---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 147 (336)
+..+.+.+|+|++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++++++++++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4567789999999 8889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-hhHHHHHHhHHHHHHHHHHhhcccCchhH
Q 019729 148 EGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-NWRVLAVLGVLPCTLLIPGLFFIPESPRW 226 (336)
Q Consensus 148 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~e~~~~ 226 (336)
.|++.+...+....++.|++|+++|+.+.++...+..+|.++++.++..+ +||+.+++.+++.++..+..+++||+|+|
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~esp~~ 269 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRW 269 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 99999999999999999999999999999999999999999999988766 79999999988888777777889999999
Q ss_pred HHHcCChHHHHHHHHHHhCCChh-hHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHH
Q 019729 227 LAKMGMTEDFESSLQVLRGFDTD-ISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQ 295 (336)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (336)
+..+++.+++.+.+++..+.+.. ...+..+.+...+..+..++..++++++++..+...+.....++..
T Consensus 270 l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 339 (505)
T TIGR00898 270 LISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTT 339 (505)
T ss_pred HHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHH
Confidence 99999988888877766543321 1111111111111111112346778888877666666555544443
No 12
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=3.6e-25 Score=206.61 Aligned_cols=249 Identities=18% Similarity=0.212 Sum_probs=179.7
Q ss_pred HHHHHHHhhhhhhccccccchhhHhHhhhccCCchh-HHH-----HHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 019729 51 CVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISE-FSI-----FGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVP 124 (336)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~~~-----~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 124 (336)
......++.+..+++...++...|.+.++++.+.+. .++ +.++..++..++++++|+++||+|||+++.++.++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l 96 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVI 96 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 445567788888999999988999999888644322 122 24777899999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhH--------HHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh--
Q 019729 125 NIIGWLIISFSKDSSF--------LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG-- 194 (336)
Q Consensus 125 ~~~~~~~~~~~~~~~~--------~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~-- 194 (336)
++++.+++++++++.. ++++|+++|++.|+.++...++++|++|+++|++..++...+..+|..+++.+.
T Consensus 97 ~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~ 176 (490)
T PRK10642 97 MSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVL 176 (490)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999864 788999999999999999999999999999999999999888887777776443
Q ss_pred --c--------cchhHHHHHHhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhh
Q 019729 195 --L--------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASS 264 (336)
Q Consensus 195 --~--------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (336)
. ..|||+.|++.+++.++.+++...+||+|++...+++.++..+ +..
T Consensus 177 ~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~--------------------~~~--- 233 (490)
T PRK10642 177 ISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR--------------------EGL--- 233 (490)
T ss_pred HHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc--------------------ccc---
Confidence 2 2489999999887777666666778999987533221111000 000
Q ss_pred chhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHh-cCCCCcchhHHH
Q 019729 265 SRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFAN-AGKINISLDVIL 324 (336)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~ 324 (336)
.+..+.++++++++ .++........ .+.....++.+..|.|.++++ .|++..+...+.
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 292 (490)
T PRK10642 234 QDGPKVSFKEIATK-HWRSLLTCIGL-VIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLII 292 (490)
T ss_pred cccccCCHHHHHHH-hHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 00112234555543 23333333322 223334566788899999865 488876555443
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.94 E-value=1e-24 Score=200.50 Aligned_cols=246 Identities=20% Similarity=0.180 Sum_probs=177.2
Q ss_pred hhhHHHHHHHHHhhhhhhccccccchhhHhHhhhcc---CCchhHHHHH---HHHHHHHHHHHHHHHHHHhhhchhHHHH
Q 019729 46 VSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLK---LTISEFSIFG---SLANVGAMVGAIASGQIAEYIGRKGSLM 119 (336)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~Grr~~l~ 119 (336)
.+++..+...+++.+.++++...++...|.+.++++ .+..+.++.. ++..++..++++++|+++||+|||+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 345556666677788888999998888999999985 4455444444 4444555599999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchh--------HHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHH
Q 019729 120 IAAVPNIIGWLIISFSKDSS--------FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAY 191 (336)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 191 (336)
++.++++++.+++++++++. .++++|+++|++.|+.++...++++|++|+++|+++.++.+.+...|.++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988764 5888999999999999999999999999999999999988888777777776
Q ss_pred Hhhc------------cchhHHHHHHhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHH
Q 019729 192 LLGL------------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKR 259 (336)
Q Consensus 192 ~~~~------------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (336)
.+.. ..|||+.|++.++++++.++....+||+|++..+ +
T Consensus 178 ~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~--------------------------~--- 228 (432)
T PRK10406 178 LVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETR--------------------------A--- 228 (432)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHh--------------------------h---
Confidence 5431 3489999999888877766555567777542100 0
Q ss_pred HhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHh-cCCCCcchhHHHHHHHH
Q 019729 260 SVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFAN-AGKINISLDVILPIVEA 329 (336)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~ 329 (336)
. + ...+++++++++... .......+.....++.+..|+|.++.+ .|.+..+.+...++..+
T Consensus 229 -~---~--~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~ 290 (432)
T PRK10406 229 -L---K--EAGSLKGLWRNRRAF---IMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALF 290 (432)
T ss_pred -h---c--ccccHHHHHhhHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 0 0 011345555543222 222222222233456677889998865 58887777665554333
No 14
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.94 E-value=9.3e-25 Score=200.56 Aligned_cols=256 Identities=19% Similarity=0.179 Sum_probs=189.1
Q ss_pred HHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHH
Q 019729 49 VFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIG 128 (336)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 128 (336)
+.....+.++.+..+++.....+..|.+++++|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 96 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVG 96 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 34455666777777888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc----chhHHHHH
Q 019729 129 WLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF----VNWRVLAV 204 (336)
Q Consensus 129 ~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~----~~w~~~~~ 204 (336)
.++++++++++.++++|++.|++.+..++....++.|++|+++|+++.++...+..+|.++++.+... .+||+.|+
T Consensus 97 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~ 176 (426)
T PRK12307 97 TGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFF 176 (426)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998877654 48999998
Q ss_pred HhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHH
Q 019729 205 LGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPL 284 (336)
Q Consensus 205 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (336)
+..+..++.+......||++++..++.+ .++++ .+...+.....++++++++..+..
T Consensus 177 i~~~~~~~~~~~~~~~p~~~~~~~~~~~------------~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 233 (426)
T PRK12307 177 VGLLPVLLVIYIRARAPESKEWEEAKLS------------GKGKH-----------SQSAWSVFSLSMKGLFNRAQFPLT 233 (426)
T ss_pred HHHHHHHHHHHHHHHCCCChHHHHhhhh------------ccccc-----------cccchhhhhHHHHHHHhhchHHHH
Confidence 8655444433333345665443211100 00000 000001112245667776655544
Q ss_pred HHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCcchhHHHHHHH
Q 019729 285 MIGIGLLVLQQLSGINGVLFYSSNIFANAGKINISLDVILPIVE 328 (336)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 328 (336)
....... +..+...+.+..++|.++.+.|.++...+.+.++..
T Consensus 234 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 276 (426)
T PRK12307 234 LCVFIVL-FSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAA 276 (426)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 4332222 222333345677889999888988777776555433
No 15
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=1.9e-24 Score=196.21 Aligned_cols=168 Identities=13% Similarity=0.138 Sum_probs=144.6
Q ss_pred HHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh
Q 019729 56 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS 135 (336)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 135 (336)
.++.+..........+..|.+.+++|.++++.+++.+.+.+++.+++++.|.++||+|||+++..+.++.++++++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 94 (390)
T PRK03545 15 ALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA 94 (390)
T ss_pred HHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh
Confidence 33333333333344556789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHH
Q 019729 136 KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCT 211 (336)
Q Consensus 136 ~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~ 211 (336)
++++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|..++|.+++.+ +||+.|++.+++.+
T Consensus 95 ~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~ 174 (390)
T PRK03545 95 WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGAL 174 (390)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888544 89999999888776
Q ss_pred HHHHH-hhcccCc
Q 019729 212 LLIPG-LFFIPES 223 (336)
Q Consensus 212 ~~~~~-~~~~~e~ 223 (336)
+..+. ..++||.
T Consensus 175 l~~~~~~~~~~~~ 187 (390)
T PRK03545 175 ITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHhCCCC
Confidence 66443 3345654
No 16
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=8.4e-25 Score=201.19 Aligned_cols=176 Identities=16% Similarity=0.177 Sum_probs=152.7
Q ss_pred HHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHH
Q 019729 50 FCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGW 129 (336)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 129 (336)
.......++.+...++...++...|.+.+++|++..+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHH
Confidence 34444455556666666677788899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHH
Q 019729 130 LIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVL 205 (336)
Q Consensus 130 ~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~ 205 (336)
++++++++++.+++.|++.|++.|..++....++.|++|+++|++++++++.+..+|..+++.+.+.+ +||+.|++
T Consensus 103 ~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~ 182 (434)
T PRK11663 103 ILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMI 182 (434)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998877544 89999998
Q ss_pred hHHHHHHH-HHHhhcccCchh
Q 019729 206 GVLPCTLL-IPGLFFIPESPR 225 (336)
Q Consensus 206 ~~~~~~~~-~~~~~~~~e~~~ 225 (336)
.+++.++. ++..+++||+|+
T Consensus 183 ~~i~~~~~~~~~~~~~~~~p~ 203 (434)
T PRK11663 183 AGIIAIVVGLFLCWRLRDKPQ 203 (434)
T ss_pred HHHHHHHHHHHHHHHcCCCHh
Confidence 87766544 344456788775
No 17
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.94 E-value=3.3e-24 Score=195.69 Aligned_cols=182 Identities=23% Similarity=0.328 Sum_probs=162.0
Q ss_pred ChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 019729 45 SVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVP 124 (336)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 124 (336)
.++.|.+.+++.+..+.++++....+...|.+.+++|.++++.+++.++..++..+++++.|+++||+|||+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 34677788888888888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhH
Q 019729 125 NIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWR 200 (336)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~ 200 (336)
.+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++..+ +||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 169 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWR 169 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998887443 899
Q ss_pred HHHHHhHHHHHHHHH-HhhcccCchhH
Q 019729 201 VLAVLGVLPCTLLIP-GLFFIPESPRW 226 (336)
Q Consensus 201 ~~~~~~~~~~~~~~~-~~~~~~e~~~~ 226 (336)
+.|++.+++.++..+ ...++||+|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~ 196 (406)
T PRK11551 170 HIFYVGGVGPLLLVPLLMRWLPESRAF 196 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 999887766555443 44567888754
No 18
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=1.2e-24 Score=195.22 Aligned_cols=225 Identities=14% Similarity=0.110 Sum_probs=165.9
Q ss_pred cccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 019729 67 GYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRL 146 (336)
Q Consensus 67 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 146 (336)
..+++..|.+++|+|+|+.+.+++.+++.+++.+++++.|+++||+|||+++..+......+.+.....+++..+++.|+
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 87 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQL 87 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 34567889999999999999999999999999999999999999999998877665555554433333478999999999
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHH-HHHhhccc
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLL-IPGLFFIP 221 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~-~~~~~~~~ 221 (336)
+.|++.+. .......++|++|+++|++++++.+.+..+|.++++.++..+ +||+.|++.++++++. ++.++++|
T Consensus 88 l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 88 LAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred HHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999986 556666779999999999999999999999999998887655 9999999977776655 44556789
Q ss_pred CchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchHH
Q 019729 222 ESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGING 301 (336)
Q Consensus 222 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (336)
|+|++. ++. . +. + +....++++++++..+.. .+..++.....+.
T Consensus 167 ~~p~~~---~~~-------------~-~~-------~--------~~~~~~~~ll~~~~~~~~----~~~~~~~~~~~~~ 210 (368)
T TIGR00903 167 ALPFQA---AEG-------------F-GF-------K--------DAVKEFGALAGRKDLWII----GAILGFGVALFDN 210 (368)
T ss_pred CCCCCC---CCC-------------c-ch-------H--------HHHHHHHHHHcChhHHHH----HHHHHHHHHHHHH
Confidence 987531 000 0 00 0 000125567776554333 3334444455678
Q ss_pred HHHhHHHHHHhcCCCCcchhHHHHHHHH
Q 019729 302 VLFYSSNIFANAGKINISLDVILPIVEA 329 (336)
Q Consensus 302 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 329 (336)
+..|+|.++++.|++.. .+....+..+
T Consensus 211 ~~~wlp~~L~~~g~s~~-~~~~~~l~~~ 237 (368)
T TIGR00903 211 LAIWLEAALRPAGLEDI-AGDAVALAIL 237 (368)
T ss_pred HHHHHHHHHHHCCCChH-HHHHHHHHHH
Confidence 88999999988888754 4444443333
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.93 E-value=5.1e-24 Score=193.46 Aligned_cols=170 Identities=19% Similarity=0.181 Sum_probs=144.4
Q ss_pred HHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHH
Q 019729 54 VVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIIS 133 (336)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 133 (336)
.+.++.+..........+.+|.+.+++|+++++.++..++..++..+++++.|.++||+|||++++.+.++.+++.++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~ 103 (394)
T PRK10213 24 SVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVS 103 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333445568889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHH
Q 019729 134 FSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLP 209 (336)
Q Consensus 134 ~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~ 209 (336)
++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++...+.++|..++|.+++.+ +||+.|++.+++
T Consensus 104 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l 183 (394)
T PRK10213 104 FANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVM 183 (394)
T ss_pred HHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998888888655 899999988776
Q ss_pred HHHHHHHh-hcccCc
Q 019729 210 CTLLIPGL-FFIPES 223 (336)
Q Consensus 210 ~~~~~~~~-~~~~e~ 223 (336)
+++..+.. ...||+
T Consensus 184 ~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 184 GVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHHHHHCCCC
Confidence 66554333 345664
No 20
>TIGR00895 2A0115 benzoate transport.
Probab=99.93 E-value=2.8e-24 Score=195.09 Aligned_cols=277 Identities=18% Similarity=0.204 Sum_probs=193.4
Q ss_pred hHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHH
Q 019729 48 VVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNII 127 (336)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 127 (336)
.+.......+..+..++......+..|.+.+++|.+..+.+++.++..++..++.++.|+++||+|||+.+..+.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 94 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHH
Confidence 34444445555566666666677788889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHH
Q 019729 128 GWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLA 203 (336)
Q Consensus 128 ~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~ 203 (336)
+.+++.+.++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++.+ +|++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~ 174 (398)
T TIGR00895 95 FTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLF 174 (398)
T ss_pred HHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeeh
Confidence 9999999999999999999999999999999999999999999999999999999999999998887554 899998
Q ss_pred HHhHHHHHHH-HHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchH
Q 019729 204 VLGVLPCTLL-IPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWF 282 (336)
Q Consensus 204 ~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (336)
++.++..++. ++...++||++++..++ +.++..+..++......+..++ +.+++ +..++..+...+.+++++..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T TIGR00895 175 YVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQS--ALPEQ-KATQGTKRSVFKALFQGKTAR 250 (398)
T ss_pred hhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccccc--ccccc-ccccchhhHHHHHHhcchhHH
Confidence 8876554444 44566788888765444 2222222222221111000000 00000 000011111223334333333
Q ss_pred HHHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCcchhHHHHHHHH
Q 019729 283 PLMIGIGLLVLQQLSGINGVLFYSSNIFANAGKINISLDVILPIVEA 329 (336)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 329 (336)
..... ++..+......+....|.|.+.++.|.++.+.+.+.+...+
T Consensus 251 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 296 (398)
T TIGR00895 251 ITVLL-WLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNF 296 (398)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 33332 22233344445677788898888889988777766554443
No 21
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.93 E-value=5.6e-25 Score=204.23 Aligned_cols=181 Identities=19% Similarity=0.127 Sum_probs=153.0
Q ss_pred ChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 019729 45 SVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVP 124 (336)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 124 (336)
.+..+.+..+..++++..+.++..++...|.+.+++|++..+.+++.+++.+++.+++++.|+++||+|||+++.++.++
T Consensus 24 ~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~ 103 (467)
T PRK09556 24 FKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLIL 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHH
Confidence 34455566667777777778888899999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHh-----hcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc--
Q 019729 125 NIIGWLIISF-----SKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-- 197 (336)
Q Consensus 125 ~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-- 197 (336)
.+++.++.++ +++++.+++.|++.|++.+...+...++++|++|+++|++++|+++.+..+|.++++.+...+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~ 183 (467)
T PRK09556 104 SAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGAN 183 (467)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHH
Confidence 8777766665 588999999999999999999999999999999999999999999999999999888776322
Q ss_pred -----hhHHHHHHhHHHHHHHHH-HhhcccCchh
Q 019729 198 -----NWRVLAVLGVLPCTLLIP-GLFFIPESPR 225 (336)
Q Consensus 198 -----~w~~~~~~~~~~~~~~~~-~~~~~~e~~~ 225 (336)
+||..|.+.+++.++..+ .+++.+++|+
T Consensus 184 ~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 184 YFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred hhccCcchhHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 588888887766665533 4445677664
No 22
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.93 E-value=7.7e-24 Score=193.40 Aligned_cols=238 Identities=18% Similarity=0.209 Sum_probs=182.9
Q ss_pred HHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHH
Q 019729 51 CVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWL 130 (336)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 130 (336)
......+..+...+......|.+|.+.+++|.+.++.++..+++.+++.+++++.|+++||+|||++++.+.++.+++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 96 (413)
T PRK15403 17 FPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACA 96 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHH
Confidence 33344555566667778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHh
Q 019729 131 IISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLG 206 (336)
Q Consensus 131 ~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~ 206 (336)
++.++++++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|..++|.+++.+ +||+.|++.
T Consensus 97 ~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~ 176 (413)
T PRK15403 97 ATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAII 176 (413)
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999999999999998877777888999999999999999999999999999998888654 899999998
Q ss_pred HHHHHHHHHH-hhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHH
Q 019729 207 VLPCTLLIPG-LFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLM 285 (336)
Q Consensus 207 ~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (336)
+++.++..+. ++++||+++. +++ +. +.......++++++++..+...
T Consensus 177 ~~~~~i~~~~~~~~lp~~~~~---~~~----------------~~-------------~~~~~~~~~~~ll~~~~~~~~~ 224 (413)
T PRK15403 177 AVMGLIAFVGLLLAMPETVKR---GAV----------------PF-------------SAKSVLRDFRNVFRNRLFLTGA 224 (413)
T ss_pred HHHHHHHHHHHHHhCCCCccc---cCC----------------CC-------------ChHHHHHHHHHHHcCHHHHHHH
Confidence 8877776554 4557886430 000 00 0001122345666665444433
Q ss_pred HHHHHHHHHHhhchHHHHHhHHHHHHhc-CCCCcchhHHH
Q 019729 286 IGIGLLVLQQLSGINGVLFYSSNIFANA-GKINISLDVIL 324 (336)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~ 324 (336)
+...+ .......+..+.|.++++. |.++.+.+...
T Consensus 225 l~~~~----~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~ 260 (413)
T PRK15403 225 ATLSL----SYIPMMSWVAVSPVILIDAGGMTTSQFAWTQ 260 (413)
T ss_pred HHHHH----HHHHHHHHHHhChHHHHHhcCCCHHHHHHHH
Confidence 33222 2223445666778888776 88888777654
No 23
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=6.6e-24 Score=198.29 Aligned_cols=177 Identities=16% Similarity=0.158 Sum_probs=158.8
Q ss_pred hHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHH
Q 019729 48 VVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNII 127 (336)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 127 (336)
.|.++..++++.+...++.+..+..+|.+.+++|.+.++.+|+.+++.++..++.+++|+++||+|||++++.+.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 45677788888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhcc-CCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHH
Q 019729 128 GWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIA-PQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVL 202 (336)
Q Consensus 128 ~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~ 202 (336)
++++++++++++.++++|+++|++.+...+.....+.+.+ |+++|+++.+++.....+|..+||.+++.+ +||+.
T Consensus 84 ~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~ 163 (495)
T PRK14995 84 ASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSV 163 (495)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHH
Confidence 9999999999999999999999999998888888787776 679999999999999999999999998666 89999
Q ss_pred HHHhHHHHHHHHH-HhhcccCch
Q 019729 203 AVLGVLPCTLLIP-GLFFIPESP 224 (336)
Q Consensus 203 ~~~~~~~~~~~~~-~~~~~~e~~ 224 (336)
|++...+.++.++ ..+++|+++
T Consensus 164 f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 164 FLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC
Confidence 9998776666544 445567765
No 24
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.92 E-value=7.3e-30 Score=236.10 Aligned_cols=269 Identities=37% Similarity=0.589 Sum_probs=209.5
Q ss_pred HHhhhhhhccccccchhhHhHh--hhccCC---------chhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 019729 56 ALGPIQFGFTCGYSSPTQAEII--SDLKLT---------ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVP 124 (336)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~--~~~g~s---------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 124 (336)
.++.+..|++....+...+... ..++.+ ..+.+++.++..+|..+|++++|+++||+|||+.+.++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3444666777766655544433 222222 23468899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc---chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----
Q 019729 125 NIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---- 197 (336)
Q Consensus 125 ~~~~~~~~~~~~---~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---- 197 (336)
..++.++.++++ +++.++++|++.|++.|+..+..+.++.|..|+++|+...++.+.+..+|.+++..++..+
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 9999999999999999999999999999999999999999999999999988887776433
Q ss_pred h---hHHHHHHhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHH
Q 019729 198 N---WRVLAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAE 274 (336)
Q Consensus 198 ~---w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (336)
+ ||..+++.++++++.++..+++||||+|+..+++.+|+++.++++++.+.+.++. ++..++.++.++ .+..+++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~ 243 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEI-EEIKAEKKESQE-SKASWRD 243 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccccccccccccccccccccccccc-cccccccccccc-cceeeee
Confidence 4 9999999999998888888899999999999999999999998876654222222 221111111111 1256777
Q ss_pred Hhcccc-hHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCc-chhHHHHH
Q 019729 275 LKRKRY-WFPLMIGIGLLVLQQLSGINGVLFYSSNIFANAGKINI-SLDVILPI 326 (336)
Q Consensus 275 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~~~~~~~ 326 (336)
+++++. +++.++.+.+..+.+..+++.+.+|.+.++++.|.+.. ....+.++
T Consensus 244 l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 297 (451)
T PF00083_consen 244 LFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGL 297 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 777753 56677777777777788888888999999988888766 33333333
No 25
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.92 E-value=7.8e-23 Score=190.01 Aligned_cols=157 Identities=14% Similarity=0.185 Sum_probs=130.0
Q ss_pred ccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 019729 64 FTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFM 143 (336)
Q Consensus 64 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (336)
+......+..|.+.+++|++.++.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++++++++++.+++
T Consensus 50 ~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 129 (476)
T PLN00028 50 VSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIA 129 (476)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 33445667788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHH----HHhhc---------cchhHHHHHHhHHHH
Q 019729 144 GRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLA----YLLGL---------FVNWRVLAVLGVLPC 210 (336)
Q Consensus 144 ~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~----~~~~~---------~~~w~~~~~~~~~~~ 210 (336)
.|++.|++.+... ....+++|++|+++|++++++.+....+|..++ +.+.. ..+||+.|++.+++.
T Consensus 130 ~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~ 208 (476)
T PLN00028 130 VRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLH 208 (476)
T ss_pred HHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHH
Confidence 9999999887654 456688999999999999999876655555554 43322 138999999988887
Q ss_pred HHHHHHhhccc
Q 019729 211 TLLIPGLFFIP 221 (336)
Q Consensus 211 ~~~~~~~~~~~ 221 (336)
++..+..++++
T Consensus 209 l~~~l~~~~~~ 219 (476)
T PLN00028 209 IIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHc
Confidence 76655544444
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=7.5e-23 Score=185.84 Aligned_cols=164 Identities=16% Similarity=0.178 Sum_probs=136.9
Q ss_pred hHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHH
Q 019729 48 VVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNII 127 (336)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 127 (336)
.|......+.+.+.. ......++..|.+++++|+|.++.+++.+++.+++.+++++.|+++||+|||+++..+..+.++
T Consensus 8 ~~~~~~~~~~~~~~~-~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~ 86 (393)
T PRK09705 8 NFMLLVLVLIGLNMR-PLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAV 86 (393)
T ss_pred HHHHHHHHHHHHHcc-hhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHH
Confidence 344444444443332 2235677889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc----c-hhHHH
Q 019729 128 GWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF----V-NWRVL 202 (336)
Q Consensus 128 ~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~----~-~w~~~ 202 (336)
+.++++++++++.+++.|++.|++.+...+....++.+++| ++|+++++.+..+...|..+++.++.. . +||+.
T Consensus 87 ~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~ 165 (393)
T PRK09705 87 GALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQT 165 (393)
T ss_pred HHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 99999999999999999999999999999999999999997 789999999888777777766666543 2 79988
Q ss_pred HHHhHHHHHHH
Q 019729 203 AVLGVLPCTLL 213 (336)
Q Consensus 203 ~~~~~~~~~~~ 213 (336)
+.+.++..++.
T Consensus 166 ~~~~~~~~~~~ 176 (393)
T PRK09705 166 LAWWALPAVVA 176 (393)
T ss_pred HHHHHHHHHHH
Confidence 77655554443
No 27
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=1.9e-23 Score=193.98 Aligned_cols=262 Identities=13% Similarity=0.113 Sum_probs=189.0
Q ss_pred ChhhHHHHHHHHHhhhhhhccccccchhhHhHhh----------------------hccCCchhHHHHHHHHHHHHHHHH
Q 019729 45 SVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIIS----------------------DLKLTISEFSIFGSLANVGAMVGA 102 (336)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~g~s~~~~~~~~~~~~~~~~~~~ 102 (336)
.+.++.+..++.++......++...+...+.+.+ +++++..+.|++.+++.+++.+++
T Consensus 14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~ 93 (465)
T TIGR00894 14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQ 93 (465)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHH
Confidence 3445556666666666666677666666666655 789999999999999999999999
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHH
Q 019729 103 IASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS--KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQ 180 (336)
Q Consensus 103 ~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~ 180 (336)
++.|+++||+|||+++..+.++.+++.+++.++ .+++.+++.|+++|++.+...+....+++|++|+++|+++.++..
T Consensus 94 ~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 173 (465)
T TIGR00894 94 IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMST 173 (465)
T ss_pred cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999999999999999998888877543 567889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHHHHHHhh-cccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHH
Q 019729 181 LSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLF-FIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEV 254 (336)
Q Consensus 181 ~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (336)
.+..+|.++++.+++.+ +||+.|++.+++.++..+.++ +.+|+|+.. +...++.++
T Consensus 174 ~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~---------------- 235 (465)
T TIGR00894 174 SGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH--PCISKFEKK---------------- 235 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC--CCCCHHHHH----------------
Confidence 99999999998887543 899999998888776655544 456666421 001111000
Q ss_pred HHHHHHhh--hhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhc-CCCCcchhHHHHHHHH
Q 019729 255 NEIKRSVA--SSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANA-GKINISLDVILPIVEA 329 (336)
Q Consensus 255 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~ 329 (336)
..++..+ +.+.+.+..++++++++..+. ..+..++...+.+.+..|+|.++.+. |.+..+.+.+.++..+
T Consensus 236 -~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~ 308 (465)
T TIGR00894 236 -YINSSLQGQKGSTRQSLPIKAIPKSLPVWA----IWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYL 308 (465)
T ss_pred -HHHhhcccccCCCCCCCCHHHHhcCHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHH
Confidence 0000000 001111234666776654333 33334444445667888999998765 9988888776554433
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.92 E-value=1.1e-23 Score=190.79 Aligned_cols=248 Identities=17% Similarity=0.141 Sum_probs=179.7
Q ss_pred ccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 019729 64 FTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFM 143 (336)
Q Consensus 64 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (336)
++...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.++++++++++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (399)
T TIGR00893 8 LDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYI 87 (399)
T ss_pred HHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 45566677788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHH-hh
Q 019729 144 GRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPG-LF 218 (336)
Q Consensus 144 ~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~-~~ 218 (336)
.|++.|++.+...+....++.|++|+++|+++.++.+....+|.++++.+++.+ +||+.|++.+++.++..+. .+
T Consensus 88 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 88 LRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999888654 8999999888777666544 34
Q ss_pred cccCchhHHHHcCChHHHHHH-HHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhh
Q 019729 219 FIPESPRWLAKMGMTEDFESS-LQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLS 297 (336)
Q Consensus 219 ~~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (336)
+.||+|+.. +...++.++. .+..+.+ ...++.++......++.++++...... +..+....
T Consensus 168 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 229 (399)
T TIGR00893 168 FIPDPPQKA--KWLTEEEKYIVVGGLLAE------------QQGKGPSTPKKYQIKELLKDRRVWGLA----LGQFLVNI 229 (399)
T ss_pred eecCCCCcc--ccCCHHHHhhcchhhccc------------cccccccCCCccchHHHhcCHHHHHHH----HHHHHHHh
Confidence 566655311 0001110000 0000000 000011111223455566654333322 22333333
Q ss_pred chHHHHHhHHHHHHhc-CCCCcchhHHHHHHHH
Q 019729 298 GINGVLFYSSNIFANA-GKINISLDVILPIVEA 329 (336)
Q Consensus 298 ~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~ 329 (336)
....+..+.|.++.+. |.+..+.+.+.+...+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (399)
T TIGR00893 230 GLGFFLTWFPTYLVQERGLSILEAGFMASLPGI 262 (399)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHH
Confidence 4556777888888654 8887777766554433
No 29
>PRK15075 citrate-proton symporter; Provisional
Probab=99.91 E-value=8.3e-23 Score=187.99 Aligned_cols=159 Identities=28% Similarity=0.387 Sum_probs=131.8
Q ss_pred HHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHH-HHHHH-----HHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 019729 51 CVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIF-GSLAN-----VGAMVGAIASGQIAEYIGRKGSLMIAAVP 124 (336)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~-~~~~~-----~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 124 (336)
....++++.+.++++...++...|.+.++++.++.+.+.+ .+... ++..+++++.|+++||+|||+.++.+.++
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 5666777889999999999999999999999988775443 33322 22347899999999999999999999999
Q ss_pred HHHHHHHHHhhcchh--------HHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhc-
Q 019729 125 NIIGWLIISFSKDSS--------FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL- 195 (336)
Q Consensus 125 ~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~- 195 (336)
++++.++++++++++ .+++.|+++|++.+...+....+++|++|+++|+++.++...+..+|..+++.++.
T Consensus 96 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 96 MASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999876 46889999999999999999999999999999999999988777666666555443
Q ss_pred -----------cchhHHHHHHhHHH
Q 019729 196 -----------FVNWRVLAVLGVLP 209 (336)
Q Consensus 196 -----------~~~w~~~~~~~~~~ 209 (336)
..+||+.|++..+.
T Consensus 176 l~~~~~~~~~~~~gWr~~f~~~~~~ 200 (434)
T PRK15075 176 LNQWLSPAQMAEWGWRIPFLIGCLI 200 (434)
T ss_pred HHHhCCHHHHhccchHHHHHHHHHH
Confidence 24899999886544
No 30
>PRK09952 shikimate transporter; Provisional
Probab=99.91 E-value=1.8e-22 Score=185.87 Aligned_cols=177 Identities=19% Similarity=0.184 Sum_probs=143.0
Q ss_pred HHHHHHHHhhhhhhccccccchhhHh-Hhhhc--cCCchhHHHHH-----HHHHHHHHHHHHHHHHHHhhhchhHHHHHH
Q 019729 50 FCVLVVALGPIQFGFTCGYSSPTQAE-IISDL--KLTISEFSIFG-----SLANVGAMVGAIASGQIAEYIGRKGSLMIA 121 (336)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--g~s~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 121 (336)
.......++.+.++++...++...|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++.++
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~ 100 (438)
T PRK09952 22 RAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLT 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHH
Confidence 34555666778888888887777664 44555 66665 45443 345566789999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcchh--------HHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHh
Q 019729 122 AVPNIIGWLIISFSKDSS--------FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL 193 (336)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 193 (336)
.++++++++++++++++. .++++|+++|++.|..++....++.|++|+++|++..+..+.+..+|.+++..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~ 180 (438)
T PRK09952 101 VWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGL 180 (438)
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999986 588899999999999999999999999999999999999999999998888654
Q ss_pred hc------------cchhHHHHHHhHHHHHHHHHHhhcccCchhHH
Q 019729 194 GL------------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 227 (336)
Q Consensus 194 ~~------------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 227 (336)
.. ..+||+.|++.+++.++........||+|++.
T Consensus 181 ~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~ 226 (438)
T PRK09952 181 VSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFE 226 (438)
T ss_pred HHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHH
Confidence 42 34899999998877666555555678887653
No 31
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.91 E-value=1.1e-22 Score=188.22 Aligned_cols=176 Identities=13% Similarity=0.135 Sum_probs=141.2
Q ss_pred HHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHH
Q 019729 49 VFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIG 128 (336)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 128 (336)
|.++....+.....+......+...|.+.++ |++..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~ 106 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV 106 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHH
Confidence 3333334444444444444455667888888 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc----chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHH-HHHHhhc----cchh
Q 019729 129 WLIISFSK----DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIM-LAYLLGL----FVNW 199 (336)
Q Consensus 129 ~~~~~~~~----~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~----~~~w 199 (336)
.+.+++.+ +++.+++.|++.|++.+..++.....+.|++|+++|++++++++.+..+|.. .+|.++. ..+|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw 186 (452)
T PRK11273 107 MLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDW 186 (452)
T ss_pred HHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccH
Confidence 88887753 6778889999999999998888888999999999999999999999988864 4555432 2289
Q ss_pred HHHHHHhHHHHHHH-HHHhhcccCchh
Q 019729 200 RVLAVLGVLPCTLL-IPGLFFIPESPR 225 (336)
Q Consensus 200 ~~~~~~~~~~~~~~-~~~~~~~~e~~~ 225 (336)
|+.|++.+++.++. ++..+++||+|+
T Consensus 187 ~~~f~i~~~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 187 HAALYMPAFAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCHh
Confidence 99999987766654 445567788875
No 32
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.91 E-value=9.6e-24 Score=190.23 Aligned_cols=252 Identities=12% Similarity=0.093 Sum_probs=180.5
Q ss_pred hhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchh
Q 019729 60 IQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS 139 (336)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 139 (336)
+...++...++...|.+.+++|.+..+.+++.++..++..+++++.|+++||+|||+++.++.++.+++.++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 84 (379)
T TIGR00881 5 AAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLW 84 (379)
T ss_pred hHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHH
Confidence 34445666777788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHH-hhc----cchhHHHHHHhHHHHHHH-
Q 019729 140 FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL-LGL----FVNWRVLAVLGVLPCTLL- 213 (336)
Q Consensus 140 ~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~-~~~----~~~w~~~~~~~~~~~~~~- 213 (336)
.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++. ++. ..+||+.|++.+++.++.
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (379)
T TIGR00881 85 VMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVS 164 (379)
T ss_pred HHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998883 443 338999999887766654
Q ss_pred HHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHH
Q 019729 214 IPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVL 293 (336)
Q Consensus 214 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (336)
++..++.||+|+....+...++ .+ +. .++.++..++.....+...+++++++..+...+...+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~----------~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 228 (379)
T TIGR00881 165 LICFLLLRDSPQSCGLPPAEEM----------PN-EE---PDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFV-- 228 (379)
T ss_pred HHHheeeCCCccccccCccccC----------cc-cc---cccccccccccccchHHHHHHHHhcchHHHHHHHHHHH--
Confidence 4455567776542110000000 00 00 00000000011111223345566665544433332222
Q ss_pred HHhhchHHHHHhHHHHHHhc-CCCCcchhHHHHHHHH
Q 019729 294 QQLSGINGVLFYSSNIFANA-GKINISLDVILPIVEA 329 (336)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~ 329 (336)
......+..|.|.++.+. |+++.+++.+.+...+
T Consensus 229 --~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 263 (379)
T TIGR00881 229 --YVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYEL 263 (379)
T ss_pred --HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 223346777888887664 9988888776655444
No 33
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.91 E-value=9.4e-22 Score=184.19 Aligned_cols=180 Identities=23% Similarity=0.319 Sum_probs=156.6
Q ss_pred hhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHH
Q 019729 47 SVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNI 126 (336)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 126 (336)
+.+.....+.++.+..+++.....+..|.+.+++|++..+.+++.+.+.++..+++++.|+++||+|||++++++.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34445556666777777788888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHH
Q 019729 127 IGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVL 202 (336)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~ 202 (336)
++.++++++++++.+++.|++.|++.+..++....++.|++|+++|+++.++...+..+|..+++.+.+.+ +||+.
T Consensus 97 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~ 176 (496)
T PRK03893 97 VGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRAL 176 (496)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998887654 89999
Q ss_pred HHHhHHHHHHHHHHhhcccCchhH
Q 019729 203 AVLGVLPCTLLIPGLFFIPESPRW 226 (336)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~e~~~~ 226 (336)
|++..+..++.++....+||++++
T Consensus 177 f~~~~~~~~~~~~~~~~~p~~~~~ 200 (496)
T PRK03893 177 FFIGILPIIFALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHHHHHHHhCCCchhh
Confidence 988655555444445567777654
No 34
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.91 E-value=6e-23 Score=193.27 Aligned_cols=215 Identities=20% Similarity=0.218 Sum_probs=170.8
Q ss_pred hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhh
Q 019729 78 SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISY 157 (336)
Q Consensus 78 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 157 (336)
+.+..+.....+..+++.+|.++|++++|.++||+|||+++++++++..++.++.++++|++.+++.|++.|++.++...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 55667778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc--hhHHHHHHhHHHHHHHHHHhhcccCchhHHHHcCChHH
Q 019729 158 TVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV--NWRVLAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTED 235 (336)
Q Consensus 158 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 235 (336)
+...++.|++++++|+.+..+ ......++.+++.+++++ +||+.+++..++.++.++.+++.||+|+|+..+++.++
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~ 269 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDE 269 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHH
Confidence 999999999999999999999 666666666666666555 89999999999998887777777899999999999999
Q ss_pred HHHHHHHHhCCC---hhhHHHHHHH-HHHh-hhhchhhhhhHHHHhcccchHHHHHHHHHHHH
Q 019729 236 FESSLQVLRGFD---TDISIEVNEI-KRSV-ASSSRRTAIRFAELKRKRYWFPLMIGIGLLVL 293 (336)
Q Consensus 236 ~~~~~~~~~~~~---~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (336)
+.+.+++..+.+ .+..+..+.. .... +....+++..+.++++.+..+...+...+.++
T Consensus 270 a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~ 332 (521)
T KOG0255|consen 270 AIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWF 332 (521)
T ss_pred HHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHH
Confidence 999888876533 1111111111 1111 11112233557788887654444454444443
No 35
>PRK03699 putative transporter; Provisional
Probab=99.91 E-value=3.4e-22 Score=181.70 Aligned_cols=167 Identities=14% Similarity=0.116 Sum_probs=144.9
Q ss_pred HHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHH
Q 019729 51 CVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWL 130 (336)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 130 (336)
....++++.+..+......++..|.+.+++|+|.++.+++.+...+++.+++++.|++.||+|||+++..+.++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 87 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVA 87 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 33344555666666677788889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc-----chhHHHHHH
Q 019729 131 IISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF-----VNWRVLAVL 205 (336)
Q Consensus 131 ~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~-----~~w~~~~~~ 205 (336)
+++++++++.+++.|++.|++.+...+....++.|++|+++|+.+.+..+....+|..++|.+.+. .+||+.|++
T Consensus 88 l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~ 167 (394)
T PRK03699 88 GLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYAC 167 (394)
T ss_pred HHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 999999999999999999999999999999999999999999999999888888888888776543 389999998
Q ss_pred hHHHHHHHHHHh
Q 019729 206 GVLPCTLLIPGL 217 (336)
Q Consensus 206 ~~~~~~~~~~~~ 217 (336)
.+++.++..+..
T Consensus 168 ~~~~~~~~~~~~ 179 (394)
T PRK03699 168 IGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHH
Confidence 877766654443
No 36
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.91 E-value=2.5e-22 Score=181.74 Aligned_cols=229 Identities=17% Similarity=0.229 Sum_probs=175.5
Q ss_pred hccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 019729 63 GFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLF 142 (336)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 142 (336)
........+..|.+.+++|.++++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++.++++++.++
T Consensus 18 ~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (385)
T TIGR00710 18 PLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLL 97 (385)
T ss_pred HHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 44556677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHH-h
Q 019729 143 MGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPG-L 217 (336)
Q Consensus 143 ~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~-~ 217 (336)
+.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++.+ +||+.+++.++..++..+. .
T Consensus 98 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (385)
T TIGR00710 98 VLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIF 177 (385)
T ss_pred HHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888654 8999999877776665443 4
Q ss_pred hcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhh
Q 019729 218 FFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLS 297 (336)
Q Consensus 218 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (336)
++.||+++.. ++ + +.++.....++.++++..+...+...+.. .
T Consensus 178 ~~~~~~~~~~---~~--------------~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 220 (385)
T TIGR00710 178 FILPETLPYE---AR--------------I----------------QISTYFETFLLLLKSKMFWGYALIYGASF----G 220 (385)
T ss_pred HhCCCCCCCc---cc--------------C----------------CHHHHHHHHHHHHcCchhHHHHHHHHHHH----H
Confidence 4566654210 00 0 00001123445566655444333322222 2
Q ss_pred chHHHHHhHHHHHH-hcCCCCcchhHHHHHHH
Q 019729 298 GINGVLFYSSNIFA-NAGKINISLDVILPIVE 328 (336)
Q Consensus 298 ~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~ 328 (336)
..+....+.|.+++ +.|.++.+.+.+.+...
T Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~ 252 (385)
T TIGR00710 221 GFFAFFSGAPFVYIDIMGVSPSVFGLLFALNI 252 (385)
T ss_pred HHHHHHHcChHHHHHHcCCCHHHHHHHHHHHH
Confidence 23455666777776 55998888777665443
No 37
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.91 E-value=3e-22 Score=181.30 Aligned_cols=168 Identities=20% Similarity=0.267 Sum_probs=147.5
Q ss_pred HHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh
Q 019729 56 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS 135 (336)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 135 (336)
.+..+..++......+.+|.+++++|.+.++.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~ 88 (382)
T PRK10091 9 ALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS 88 (382)
T ss_pred HHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh
Confidence 34445555666677788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHH
Q 019729 136 KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCT 211 (336)
Q Consensus 136 ~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~ 211 (336)
++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+ +||+.|++.++..+
T Consensus 89 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~ 168 (382)
T PRK10091 89 SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNI 168 (382)
T ss_pred CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHH
Confidence 99999999999999999998898899999999999999999999999999999888877544 89999999887766
Q ss_pred HHHH-HhhcccCc
Q 019729 212 LLIP-GLFFIPES 223 (336)
Q Consensus 212 ~~~~-~~~~~~e~ 223 (336)
+..+ ....+||.
T Consensus 169 ~~~~~~~~~lp~~ 181 (382)
T PRK10091 169 AVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHhCCCC
Confidence 6544 34456765
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.91 E-value=4.8e-22 Score=181.46 Aligned_cols=179 Identities=17% Similarity=0.172 Sum_probs=154.8
Q ss_pred hhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHH
Q 019729 46 VSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPN 125 (336)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 125 (336)
++.++..+.+.+..+...+....+.+.+|.+.+++|.+..+.++..+++.+++.+++++.|.++||+|||++++++..+.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 55666667777777777777777888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHH
Q 019729 126 IIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRV 201 (336)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~ 201 (336)
+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|.+..++......+|..++|.+++.+ +||+
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~ 168 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRG 168 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccH
Confidence 999999999999999999999999999988899999999999999999999988887778888888877544 8999
Q ss_pred HHHHhHHHHHHHHHH-hhcccCch
Q 019729 202 LAVLGVLPCTLLIPG-LFFIPESP 224 (336)
Q Consensus 202 ~~~~~~~~~~~~~~~-~~~~~e~~ 224 (336)
.+++.+++.++..+. .+..||++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 169 MFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999887777666543 34567654
No 39
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.91 E-value=5.6e-23 Score=183.54 Aligned_cols=165 Identities=25% Similarity=0.418 Sum_probs=142.1
Q ss_pred hhhhccccccchhhH-hHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcch
Q 019729 60 IQFGFTCGYSSPTQA-EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS 138 (336)
Q Consensus 60 ~~~~~~~~~~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 138 (336)
+..++......+..| .+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 85 (352)
T PF07690_consen 6 FLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNF 85 (352)
T ss_dssp HHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhH
Confidence 444455556677788 7899999999999999999999999999999999999999999999999999997776676888
Q ss_pred hHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHH
Q 019729 139 SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLI 214 (336)
Q Consensus 139 ~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~ 214 (336)
+.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|.+++|.+++.+ +||+.|++.+++.++..
T Consensus 86 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (352)
T PF07690_consen 86 WLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAA 165 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHH
T ss_pred HHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhh
Confidence 89999999999999999999999999999999999999999999999999999998765 79999999888888776
Q ss_pred HH-hhcccCch
Q 019729 215 PG-LFFIPESP 224 (336)
Q Consensus 215 ~~-~~~~~e~~ 224 (336)
++ ..++++++
T Consensus 166 il~~~~~~~~~ 176 (352)
T PF07690_consen 166 ILFILFLPEPP 176 (352)
T ss_dssp HHHHCCC---S
T ss_pred hhHhhhhhhcc
Confidence 53 34455443
No 40
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.90 E-value=5.5e-23 Score=191.93 Aligned_cols=173 Identities=18% Similarity=0.307 Sum_probs=153.6
Q ss_pred HHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHH
Q 019729 52 VLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLI 131 (336)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 131 (336)
...++++.+...++....++..|.+.+++|.+.++.+++.+++.++..++.++.|+++||+|||++++++.++.+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 83 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLL 83 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 34455566667777788888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhH
Q 019729 132 ISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGV 207 (336)
Q Consensus 132 ~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~ 207 (336)
++++++++.+++.|+++|++.+...+...+++.|++|+++|+++.+++..+..+|..++|.+++.+ +||+.|++.+
T Consensus 84 ~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~ 163 (485)
T TIGR00711 84 CGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINV 163 (485)
T ss_pred HhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhh
Confidence 999999999999999999999999999999999999999999999999999999999998888655 8999999987
Q ss_pred HHHHHHHHH-hhcccCch
Q 019729 208 LPCTLLIPG-LFFIPESP 224 (336)
Q Consensus 208 ~~~~~~~~~-~~~~~e~~ 224 (336)
.+.++..+. .+++||++
T Consensus 164 ~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 164 PIGIIVVVVAFFILPRDK 181 (485)
T ss_pred HHHHHHHHHHHHHcCCcc
Confidence 776665443 44566643
No 41
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.90 E-value=1.5e-22 Score=182.33 Aligned_cols=156 Identities=14% Similarity=0.111 Sum_probs=136.1
Q ss_pred cccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 019729 67 GYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRL 146 (336)
Q Consensus 67 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 146 (336)
...++..|.+.+++|++..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++++++++++.+++.|+
T Consensus 20 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (377)
T TIGR00890 20 YTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYG 99 (377)
T ss_pred hhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc----chhHHHHHHhHHHHHHHHHHh-hccc
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF----VNWRVLAVLGVLPCTLLIPGL-FFIP 221 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~----~~w~~~~~~~~~~~~~~~~~~-~~~~ 221 (336)
+.|++.+..++.....+.+++| ++|+++.++...+..+|..+++.+... .+||+.|++.+++.++..+.. ++++
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 178 (377)
T TIGR00890 100 LASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIG 178 (377)
T ss_pred HHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhee
Confidence 9999999888888889999997 679999999999999988765554433 379999999888777665443 4455
Q ss_pred Cc
Q 019729 222 ES 223 (336)
Q Consensus 222 e~ 223 (336)
++
T Consensus 179 ~~ 180 (377)
T TIGR00890 179 YP 180 (377)
T ss_pred cC
Confidence 44
No 42
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.7e-24 Score=189.64 Aligned_cols=181 Identities=17% Similarity=0.194 Sum_probs=164.9
Q ss_pred CChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHH
Q 019729 44 GSVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAV 123 (336)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 123 (336)
..+..+..+.++++.+.+...+...+..+.+.+++.+|++++..|++.+++.+++.+.+|++|+++||++||+++.+|.+
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~ 106 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIF 106 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHH
Confidence 34455666777778888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----h
Q 019729 124 PNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----N 198 (336)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~ 198 (336)
++.++.++++++..+|+++++|.+.|+|.+.+.++.+++++|.+|..+|++++++++.+..+|..+|.+.+..+ .
T Consensus 107 iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~ 186 (493)
T KOG1330|consen 107 IWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888666 4
Q ss_pred hHHHHHHhHHHHHHHHHH-hhcccCch
Q 019729 199 WRVLAVLGVLPCTLLIPG-LFFIPESP 224 (336)
Q Consensus 199 w~~~~~~~~~~~~~~~~~-~~~~~e~~ 224 (336)
|||.|+..+++.++..++ .++.+|..
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 999999999998887554 45667654
No 43
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.5e-22 Score=184.78 Aligned_cols=232 Identities=15% Similarity=0.200 Sum_probs=185.8
Q ss_pred hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHhhh
Q 019729 77 ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK--DSSFLFMGRLLEGFGVGV 154 (336)
Q Consensus 77 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~ 154 (336)
..+++++.++.+++.+.++.|+++++++.|++.||+|.|+++..+.++.++++++..++. +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 457899999999999999999999999999999999999999999999999999988765 455778999999999999
Q ss_pred hhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHHHHHHhh-cccCchhHHH
Q 019729 155 ISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLF-FIPESPRWLA 228 (336)
Q Consensus 155 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~ 228 (336)
.+|....+.+.|.|+++|++..++...+..+|.+++.++++.+ ||+..|++.++++++..++++ +..|+|..
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~-- 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK-- 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc--
Confidence 9999999999999999999999999999999999888777654 999999999999888866654 45677752
Q ss_pred HcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchh--hhhhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhH
Q 019729 229 KMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRR--TAIRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYS 306 (336)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (336)
+... .++|.+.+++...+++.+ .+.+++++++++. +++.++..++...+.+.+..|+
T Consensus 223 -h~~i----------------s~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~----vwai~~~~f~~~~~~~~l~~y~ 281 (466)
T KOG2532|consen 223 -HPNI----------------SEKELKYIEKGKSEAHVKKKPPVPYKAILTSPP----VWAIWISAFGGNWGFYLLLTYL 281 (466)
T ss_pred -CCCC----------------CHHHHHHHHhcccccccCCCCCCCHHHHHcCHH----HHHHHHHHHHHHHHHHHHHHHh
Confidence 1111 111222222222222221 4678999999854 4455556666777788999999
Q ss_pred HHHHHhc-CCCCcchhHHHHHHHHhh
Q 019729 307 SNIFANA-GKINISLDVILPIVEALN 331 (336)
Q Consensus 307 ~~~~~~~-g~s~~~~~~~~~~~~~~g 331 (336)
|.|+++. |++..+.+++.++..++.
T Consensus 282 PtY~~~VL~f~v~~~G~~salP~l~~ 307 (466)
T KOG2532|consen 282 PTYLKEVLGFDVRETGFLSALPFLAM 307 (466)
T ss_pred hHHHHHHhCCChhhhhHHHHHHHHHH
Confidence 9999988 999988888877666544
No 44
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.90 E-value=7.1e-22 Score=177.24 Aligned_cols=159 Identities=8% Similarity=0.017 Sum_probs=139.6
Q ss_pred hhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc----
Q 019729 61 QFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---- 136 (336)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---- 136 (336)
...+......+.+|.+..+++.+..+.+++.++..++..+++++.|+++||+|||++++.+.++.+++.++..+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (365)
T TIGR00900 10 ISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGG 89 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3334455566778888889999999999999999999999999999999999999999999999988888888777
Q ss_pred -chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHH
Q 019729 137 -DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCT 211 (336)
Q Consensus 137 -~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~ 211 (336)
+++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.+++|.+++.+ +||+.+++.++..+
T Consensus 90 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 169 (365)
T TIGR00900 90 LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFA 169 (365)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999888655 89999988777666
Q ss_pred HHHHHhhc
Q 019729 212 LLIPGLFF 219 (336)
Q Consensus 212 ~~~~~~~~ 219 (336)
+..+..+.
T Consensus 170 ~~~~~~~~ 177 (365)
T TIGR00900 170 ISALLIVS 177 (365)
T ss_pred HHHHHHHh
Confidence 55444433
No 45
>PRK11043 putative transporter; Provisional
Probab=99.90 E-value=2.2e-21 Score=176.88 Aligned_cols=221 Identities=18% Similarity=0.192 Sum_probs=169.0
Q ss_pred ccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 019729 64 FTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFM 143 (336)
Q Consensus 64 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (336)
+....+.|..|.+.+++|.++++.+++.+++.++..++++++|+++||+|||+.+..+.++.+++.+++.++++++.+++
T Consensus 20 ~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 99 (401)
T PRK11043 20 LATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLV 99 (401)
T ss_pred HHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 44566678888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhc
Q 019729 144 GRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFF 219 (336)
Q Consensus 144 ~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 219 (336)
.|++.|++.+...+...+++.|++|+++|+...+.......+|..++|.+++.+ +||+.+++.+++.++..+..++
T Consensus 100 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 100 LRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888889999999999999998888888888888888777544 8999999888777776655555
Q ss_pred ccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhch
Q 019729 220 IPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGI 299 (336)
Q Consensus 220 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (336)
++|+++. + + +++.+..++++++++..+...+.... .....
T Consensus 180 ~~~~~~~---~-~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 219 (401)
T PRK11043 180 LKPSKKA---R-K--------------------------------QSQDALTFKQLLKSKTYLGNVLIFAA----CSAAF 219 (401)
T ss_pred cCCCCCc---c-c--------------------------------cchHHHHHHHHHcChhHHHHHHHHHH----HHHHH
Confidence 5554320 0 0 00011234455555443332222211 11223
Q ss_pred HHHHHhHHHHHHhcCCCCcchhHHH
Q 019729 300 NGVLFYSSNIFANAGKINISLDVIL 324 (336)
Q Consensus 300 ~~~~~~~~~~~~~~g~s~~~~~~~~ 324 (336)
.....+.|.++++.|+++.+.+...
T Consensus 220 ~~~~~~~p~~~~~~g~s~~~~g~~~ 244 (401)
T PRK11043 220 FAWLTGSPFILEQMGYSPADIGLSY 244 (401)
T ss_pred HHHHHHhHHHHHHcCCCHHHHHHHH
Confidence 4556678888888899887777654
No 46
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.90 E-value=5.6e-22 Score=182.70 Aligned_cols=262 Identities=13% Similarity=0.089 Sum_probs=176.7
Q ss_pred HHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHH
Q 019729 49 VFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIG 128 (336)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 128 (336)
+.......+.+...+.....+....|.+++ +|+++++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~ 104 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAV 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHH
Confidence 334444444445554555555556676776 5999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhh----cchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc-----chh
Q 019729 129 WLIISFS----KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF-----VNW 199 (336)
Q Consensus 129 ~~~~~~~----~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~-----~~w 199 (336)
.+++++. +++..+.+.|++.|++.|..++.....+.|++|+++|++++++++.+..+|..+++.+... .+|
T Consensus 105 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w 184 (438)
T TIGR00712 105 MLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDW 184 (438)
T ss_pred HHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhh
Confidence 8887764 4566778889999999999999999999999999999999999999999998888765432 389
Q ss_pred HHHHHHhHHHHHHH-HHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcc
Q 019729 200 RVLAVLGVLPCTLL-IPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRK 278 (336)
Q Consensus 200 ~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (336)
|+.|++.+++.++. ++.++++||+|+.... .+.++. +.+..+.. .++.+.+.+.++...+..+++
T Consensus 185 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 250 (438)
T TIGR00712 185 HAALYFPAICAIIVALFAFAMMRDTPQSCGL-PPIEEY-------RNDYPDDY------NEKAEQELTAKEIFMQYVLPN 250 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCHHhcCC-CCchhc-------cccccccc------ccccccccchHHHHHHHHccC
Confidence 99999988877665 4455667887653210 000000 00000000 000000000011112234555
Q ss_pred cchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhc-CCCCcchhHHHHHHHH
Q 019729 279 RYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANA-GKINISLDVILPIVEA 329 (336)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~ 329 (336)
+..+...+...+ .....+.+..|.|.++++. |+++.+++.+..+..+
T Consensus 251 ~~~~~~~~~~~~----~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~ 298 (438)
T TIGR00712 251 KLLWYIAIANVF----VYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEY 298 (438)
T ss_pred chHHHHHHHHHH----HHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHH
Confidence 544443332222 2223456778999999875 9998887776554443
No 47
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.89 E-value=5.7e-23 Score=195.82 Aligned_cols=260 Identities=16% Similarity=0.189 Sum_probs=183.5
Q ss_pred HHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh
Q 019729 56 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS 135 (336)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 135 (336)
++..+......++.+..++.++++++++..+.|++.+.+.++++++.++.+++.||+|||+++.++.++++++++++++.
T Consensus 39 ~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alp 118 (633)
T TIGR00805 39 TCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLP 118 (633)
T ss_pred HHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhCh
Confidence 33445555666788888999999999999999999999999999999999999999999999999999999999998875
Q ss_pred c---------------------------------------------------chhHHHHHHHHHHHHhhhhhhhHhHHHH
Q 019729 136 K---------------------------------------------------DSSFLFMGRLLEGFGVGVISYTVPVYIA 164 (336)
Q Consensus 136 ~---------------------------------------------------~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 164 (336)
+ .+..++++|+++|++.+..++...+++.
T Consensus 119 hf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~ 198 (633)
T TIGR00805 119 HFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYID 198 (633)
T ss_pred HHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhh
Confidence 3 2456778999999999999999999999
Q ss_pred hccCCCcchhHHhHHHHHHHHHHHHHHHhhccc--------------------------hhHHHHHHhHHHHHHHHHHhh
Q 019729 165 EIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV--------------------------NWRVLAVLGVLPCTLLIPGLF 218 (336)
Q Consensus 165 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------------------------~w~~~~~~~~~~~~~~~~~~~ 218 (336)
|++|+++|+.+.++++.+..+|..+|+.+++.+ +|+..|++.+++.++..+.++
T Consensus 199 d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~ 278 (633)
T TIGR00805 199 DFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF 278 (633)
T ss_pred ccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998887532 267778887777776655566
Q ss_pred cccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhc
Q 019729 219 FIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSG 298 (336)
Q Consensus 219 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (336)
++|++.+....+.+.++.++ +.. ...++.. ........++.....+++++++.+....+ ..+....+
T Consensus 279 ~~p~~lp~~~~~~~~~~~~~--~~~-~~~~~~~------~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l----~~~~~~~~ 345 (633)
T TIGR00805 279 FFPKALPKEGKRVNVDVHET--EKL-EKSEDKS------RKKNSDITKDFPKIIKRLLCNPIYMLVIL----AQVIDSLA 345 (633)
T ss_pred hCccccCCcccccchhhhhh--hcc-ccccccc------chhhhhhHHHHHHHHHHHHcCcHHHHHHH----HHHHHHHH
Confidence 66654221000000000000 000 0000000 00000001112234566777765443333 33334445
Q ss_pred hHHHHHhHHHHHHh-cCCCCcchhHHHHHHH
Q 019729 299 INGVLFYSSNIFAN-AGKINISLDVILPIVE 328 (336)
Q Consensus 299 ~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~ 328 (336)
.+.+..|+|.++++ .|+++.+++.+++...
T Consensus 346 ~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~ 376 (633)
T TIGR00805 346 FNGYITFLPKYLENQYGISSAEANFLIGVVN 376 (633)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHhhhhh
Confidence 66788899999875 4999999988776544
No 48
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.89 E-value=1.2e-21 Score=176.31 Aligned_cols=239 Identities=15% Similarity=0.111 Sum_probs=161.5
Q ss_pred ccccccchhhHh-HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc-chhHH
Q 019729 64 FTCGYSSPTQAE-IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK-DSSFL 141 (336)
Q Consensus 64 ~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~ 141 (336)
.......+..|. +++++|++..+.+++.+++.+++.+++++.|+++||+|||+.++++.++.+++.+++++++ +++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~ 94 (366)
T TIGR00886 15 SVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVL 94 (366)
T ss_pred HHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 444556778884 8899999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh----cc----------chhHHHHH-Hh
Q 019729 142 FMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG----LF----------VNWRVLAV-LG 206 (336)
Q Consensus 142 ~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~----~~----------~~w~~~~~-~~ 206 (336)
++.|++.|++.+ ..+....+++|++|+++|+++.++......+|..+++.++ .. .+||+.++ ..
T Consensus 95 ~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~ 173 (366)
T TIGR00886 95 LLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVP 173 (366)
T ss_pred HHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHH
Confidence 999999999865 4566788999999999999999998855555555544443 32 26999884 33
Q ss_pred HHHHH-HHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHH
Q 019729 207 VLPCT-LLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLM 285 (336)
Q Consensus 207 ~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (336)
++..+ +.++...+.+|+|+.. +.++ +.. ..... . ..+++......+.++++..+...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~---~~~~~--~------------~~~~~~~~~~~~~~~~~~~~~~~ 231 (366)
T TIGR00886 174 AGILLLPALLIFFVGADTPPGK----PATG-KLS---FKGAR--W------------SVGTGALGDQLKVFRDRHTWILA 231 (366)
T ss_pred HHHHHHHHHHHHHhcccCCccc----ccch-hcc---ccccc--c------------cccchhHHHHHHHHhccchhhHH
Confidence 44433 3344445566665310 0000 000 00000 0 00000111344455555433333
Q ss_pred HHHHHHHHHHhhchHHHHHhHHHHHHhc-CCCCcchhHHHHHHHH
Q 019729 286 IGIGLLVLQQLSGINGVLFYSSNIFANA-GKINISLDVILPIVEA 329 (336)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~ 329 (336)
+.... .....+.+..+.|.++++. |+++.+++.+.++..+
T Consensus 232 ~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 272 (366)
T TIGR00886 232 LLYSV----TFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGL 272 (366)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 32222 2222345677788888655 9988888766654443
No 49
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=3.6e-22 Score=182.66 Aligned_cols=262 Identities=15% Similarity=0.119 Sum_probs=189.1
Q ss_pred ChhhHHHHHHHHHhhhhhhccccccch-hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHH
Q 019729 45 SVSVVFCVLVVALGPIQFGFTCGYSSP-TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAV 123 (336)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 123 (336)
++..+.++..++..++........++- .+..+.+|.+....+.+++.+++.++++++.++++.+.||++-.+.+....+
T Consensus 40 ~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~ 119 (495)
T KOG2533|consen 40 RKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGI 119 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHH
Confidence 344445555555555555555443322 2333558888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc-------
Q 019729 124 PNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF------- 196 (336)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~------- 196 (336)
++++..++....+|++.+++.|++.|+.++..+|....+++.|+.+++|+..++++.++..+|+++|..++..
T Consensus 120 ~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~ 199 (495)
T KOG2533|consen 120 LWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS 199 (495)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC
Confidence 9988888888899999999999999999999999999999999999999999999999999999999888865
Q ss_pred c---hhHHHHHHhHHHHHHHH-HHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhH
Q 019729 197 V---NWRVLAVLGVLPCTLLI-PGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRF 272 (336)
Q Consensus 197 ~---~w~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (336)
. ||||.|++.++++++.. ++.+++|+.|..- .-.+.+|..-..++.+..+ . ....++.+...+
T Consensus 200 ~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~-~fl~~~ek~~~~~~~~~~~-----------~-~~~~~~~~~~~~ 266 (495)
T KOG2533|consen 200 GGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKA-WFLTDEEKELVVERLRESP-----------S-GGIENKFKWKGF 266 (495)
T ss_pred CCcCCceeehhHHHHHHHHHHheEEEEecCChhhc-cccchHHHHHHHHHHHhcc-----------C-CCcccccCHHHH
Confidence 2 89999999988877764 5667789988611 0001111000011111110 0 000111345567
Q ss_pred HHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhc-CCCCcchhHH
Q 019729 273 AELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANA-GKINISLDVI 323 (336)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~ 323 (336)
++.++.+..+...++ .++.....+.+.+|+|.++++. |++..++..+
T Consensus 267 ~~a~~dp~vw~~~l~----~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~l 314 (495)
T KOG2533|consen 267 KEALKDPGVWPFSLC----YFFLKLVNYGFSYWLPLYLKSNGGYSELQANLL 314 (495)
T ss_pred HHHHhchhHHHHHHH----HHHHhhccccHHHHHHHHHHcCCCcChHHhccc
Confidence 777777655544433 3333334678999999999983 6776555544
No 50
>PRK10133 L-fucose transporter; Provisional
Probab=99.89 E-value=3.7e-21 Score=176.82 Aligned_cols=144 Identities=11% Similarity=0.177 Sum_probs=126.9
Q ss_pred HHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHH
Q 019729 51 CVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWL 130 (336)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 130 (336)
.+..+.+..+..++......+..|.+++++|+++.+.+++.+.+.+++.+++++.|+++||+|||+++.++..+++++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 106 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAA 106 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 33444455566677777888899999999999999999999999999999999999999999999999999999999998
Q ss_pred HH---HhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh
Q 019729 131 II---SFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 131 ~~---~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
++ ..+++++.++++|+++|++.|...+....++.|+.|+++|....++.+..+.+|..+++.++
T Consensus 107 l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 107 LFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75 46789999999999999999999999999999988777777788888888888888888765
No 51
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.89 E-value=5.1e-21 Score=174.03 Aligned_cols=161 Identities=16% Similarity=0.260 Sum_probs=140.9
Q ss_pred ccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 019729 64 FTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFM 143 (336)
Q Consensus 64 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (336)
+......+.+|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++.++.++.+++.+++.++++++.+++
T Consensus 22 ~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 101 (394)
T PRK11652 22 MAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIA 101 (394)
T ss_pred HHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 34455667789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHH-HHhh
Q 019729 144 GRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLI-PGLF 218 (336)
Q Consensus 144 ~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~-~~~~ 218 (336)
.|++.|++.+...+....+..|.+++++|+.+.+..+.+..+|..++|.+++.+ +||+.|++.++..++.. +..+
T Consensus 102 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 181 (394)
T PRK11652 102 ASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMAR 181 (394)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888888888999999999999999999999999888888887554 89999998777665543 3445
Q ss_pred cccCch
Q 019729 219 FIPESP 224 (336)
Q Consensus 219 ~~~e~~ 224 (336)
++||++
T Consensus 182 ~~~~~~ 187 (394)
T PRK11652 182 WMPETR 187 (394)
T ss_pred hCCccC
Confidence 677764
No 52
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.89 E-value=5e-21 Score=171.05 Aligned_cols=163 Identities=13% Similarity=0.204 Sum_probs=143.6
Q ss_pred cccccchhhHhHhhhccCCchh-HHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 019729 65 TCGYSSPTQAEIISDLKLTISE-FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFM 143 (336)
Q Consensus 65 ~~~~~~~~~~~~~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (336)
.+...+...|.+.+++|+++++ .+.+.+++..+++++.++.|+++||+|.|+++.++.+.+++..++.+++++...+.+
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556667788899999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc---hhHHHHH---HhHHHHHHHHHHh
Q 019729 144 GRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---NWRVLAV---LGVLPCTLLIPGL 217 (336)
Q Consensus 144 ~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~---~~~~~~~~~~~~~ 217 (336)
.|++.|++.|..+ ....++..|+|+++|+++.++...+..+|.++++++++.+ |||+... +......+++++.
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a 199 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLA 199 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999888655 7885444 3444445556677
Q ss_pred hcccCchhHHH
Q 019729 218 FFIPESPRWLA 228 (336)
Q Consensus 218 ~~~~e~~~~~~ 228 (336)
+++|..++-+.
T Consensus 200 ~~LP~~~~sl~ 210 (511)
T TIGR00806 200 LFLKRPKRSLF 210 (511)
T ss_pred HhCCCCchhhh
Confidence 78886655443
No 53
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=2.3e-21 Score=164.94 Aligned_cols=262 Identities=18% Similarity=0.157 Sum_probs=197.6
Q ss_pred hhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHH
Q 019729 46 VSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPN 125 (336)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 125 (336)
+..|.....+..+.....+..-..+.+.|.+...+|.+..+.+++......|..+++..+|.++|++|||+.+.+.....
T Consensus 74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t 153 (528)
T KOG0253|consen 74 RFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVT 153 (528)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHH
Confidence 44555555566665555544444555667788889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc----chhHH
Q 019729 126 IIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF----VNWRV 201 (336)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~----~~w~~ 201 (336)
.+...+.+.++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.++...++.. +||||
T Consensus 154 ~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~ 231 (528)
T KOG0253|consen 154 GVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRY 231 (528)
T ss_pred HHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 99999999999999999999999999998 999999999999999999877777 8888888887777643 39999
Q ss_pred HHHHhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhh----------HHHHHHHH----HHhhhhchh
Q 019729 202 LAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDI----------SIEVNEIK----RSVASSSRR 267 (336)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~~~~ 267 (336)
.......+..+...+.+++|||||++..+++.+++.+.++++...|... ..+.++.+ +......++
T Consensus 232 ~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke 311 (528)
T KOG0253|consen 232 LLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKE 311 (528)
T ss_pred HHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccc
Confidence 9988888777778888899999999999999999999888876544210 11111111 111112233
Q ss_pred hhhhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHH
Q 019729 268 TAIRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIF 310 (336)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (336)
......+++.++.++..++. +..++.+-..+++........+
T Consensus 312 ~rg~~~nLlsp~lrkttlll-w~iwfgnafsyyg~VLlttelf 353 (528)
T KOG0253|consen 312 VRGGTTNLLSPKLRKTTLLL-WRIWFGNAFSYYGSVLLTTELF 353 (528)
T ss_pred cccchHhhcChHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHH
Confidence 44567777776665555554 4444444334555555444444
No 54
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.88 E-value=1.5e-20 Score=170.24 Aligned_cols=141 Identities=18% Similarity=0.178 Sum_probs=130.4
Q ss_pred HhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc
Q 019729 57 LGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK 136 (336)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 136 (336)
.+.+..+...+...+.+|.+.+++|.|..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++
T Consensus 13 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~ 92 (381)
T PRK03633 13 CGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMV 92 (381)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44455666777888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 137 DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 137 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
+++.++++|++.|++.+...+.....+.+..++++|+++++.+..+..+|..+++.+++.+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 93 GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999998888888888999999999999999999999999999998766
No 55
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.88 E-value=3.4e-21 Score=174.02 Aligned_cols=160 Identities=20% Similarity=0.316 Sum_probs=142.9
Q ss_pred cccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 019729 65 TCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMG 144 (336)
Q Consensus 65 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (336)
......|..|.+.+++|+++++.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.++++++.+++.
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 33456688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHH-Hhhc
Q 019729 145 RLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIP-GLFF 219 (336)
Q Consensus 145 r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~-~~~~ 219 (336)
|++.|++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+ +||+.|++.+++.++..+ ..++
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998887654 899999988777666544 4456
Q ss_pred ccCch
Q 019729 220 IPESP 224 (336)
Q Consensus 220 ~~e~~ 224 (336)
+||++
T Consensus 166 ~~~~~ 170 (377)
T PRK11102 166 IPETL 170 (377)
T ss_pred CCccC
Confidence 67653
No 56
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.88 E-value=2.7e-20 Score=169.03 Aligned_cols=159 Identities=14% Similarity=0.103 Sum_probs=129.1
Q ss_pred hhhhccccccchhhHhHhh-hccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh---
Q 019729 60 IQFGFTCGYSSPTQAEIIS-DLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS--- 135 (336)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--- 135 (336)
+........+++..+.+.+ ++|+|+++.+++.++..+++.++.++.|++.||+|.|+++.++.++.++..++++++
T Consensus 44 ~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~ 123 (462)
T PRK15034 44 LLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQN 123 (462)
T ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3333455667777777766 899999999999999999999999999999999999999999999999999999987
Q ss_pred --cchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHH----HHHHhhc--------------
Q 019729 136 --KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIM----LAYLLGL-------------- 195 (336)
Q Consensus 136 --~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~----~~~~~~~-------------- 195 (336)
++++.+++.|++.|++ |..++.....+++|+|+++||++.|+.....++|.. ++|.+..
T Consensus 124 ~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~ 202 (462)
T PRK15034 124 PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQ 202 (462)
T ss_pred cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 8999999999999998 778999999999999999999999999655555554 4444321
Q ss_pred ----cchhHHHHHHhHHHHHHHHHHhhc
Q 019729 196 ----FVNWRVLAVLGVLPCTLLIPGLFF 219 (336)
Q Consensus 196 ----~~~w~~~~~~~~~~~~~~~~~~~~ 219 (336)
..+||...++..++.++..+..++
T Consensus 203 ~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 203 ADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 224777777766666655544433
No 57
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.88 E-value=1.1e-20 Score=171.67 Aligned_cols=157 Identities=24% Similarity=0.290 Sum_probs=139.4
Q ss_pred ccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 019729 68 YSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLL 147 (336)
Q Consensus 68 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 147 (336)
...+..|.+.+++|.+..+.++..+++.++..+++++.|+++||+|||+.++.+.++.+++.+++..+++.+.+++.|++
T Consensus 21 ~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 100 (392)
T PRK10473 21 MYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFL 100 (392)
T ss_pred HHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34467889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHH-HhhcccC
Q 019729 148 EGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIP-GLFFIPE 222 (336)
Q Consensus 148 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~-~~~~~~e 222 (336)
.|++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+ +||+.+++.+++.++..+ ..+++||
T Consensus 101 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 180 (392)
T PRK10473 101 QGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKE 180 (392)
T ss_pred HHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999888888888887543 899999988777666544 3455676
Q ss_pred ch
Q 019729 223 SP 224 (336)
Q Consensus 223 ~~ 224 (336)
++
T Consensus 181 ~~ 182 (392)
T PRK10473 181 TR 182 (392)
T ss_pred CC
Confidence 53
No 58
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.88 E-value=1.4e-21 Score=170.79 Aligned_cols=275 Identities=17% Similarity=0.158 Sum_probs=196.7
Q ss_pred CCChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhc-c-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 019729 43 DGSVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDL-K-------LTISEFSIFGSLANVGAMVGAIASGQIAEYIGR 114 (336)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr 114 (336)
...++....+.++.++.+.++|+...++.+.|.+...+ + +++.-.+.+..+..+|.++|++++|++.||+||
T Consensus 34 g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 34 GLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred chhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34567778888899999999999999998887765443 1 445567899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhc-------chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHH
Q 019729 115 KGSLMIAAVPNIIGWLIISFSK-------DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGI 187 (336)
Q Consensus 115 r~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 187 (336)
|+++...++++.++++++++.. -+.++.+.|+++|+|.|+-+|...+..+|....+.||...+.+.+....|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 9999999999999999777742 146788889999999999999999999999999999998887655555544
Q ss_pred HHHHHhh----ccc---------------hhHHHHHHhHHHHHHHHHHhhcccCchhHHHHcC-ChHHHHHHHHHHhCCC
Q 019729 188 MLAYLLG----LFV---------------NWRVLAVLGVLPCTLLIPGLFFIPESPRWLAKMG-MTEDFESSLQVLRGFD 247 (336)
Q Consensus 188 ~~~~~~~----~~~---------------~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~ 247 (336)
..|.+++ ..+ -||..+.+++++++..+...+.+|||+++-.... +.+.+. +...+..
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~---~d~~k~~ 270 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA---GDMKKVL 270 (538)
T ss_pred hhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh---hcccccc
Confidence 4444333 211 3999999999999999989999999998763322 222222 1111111
Q ss_pred hhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCcchhH
Q 019729 248 TDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANAGKINISLDV 322 (336)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 322 (336)
+. +.+.++..+...+..++....+.+.+..+ .-..+++.+..+|..-.+++..+.+...++++.|+.+.+...
T Consensus 271 ~~-~~~~~~~~~~~~~~~~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~ 343 (538)
T KOG0252|consen 271 SV-DIEAESTAESDVPPPSNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY 343 (538)
T ss_pred cc-ccchhhccccCCCCcccccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchH
Confidence 11 00111100111111111112244444434 234466677778887778899999999999999987766655
No 59
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.88 E-value=5.2e-21 Score=176.88 Aligned_cols=248 Identities=12% Similarity=0.112 Sum_probs=168.9
Q ss_pred cccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHH-HH
Q 019729 67 GYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFM-GR 145 (336)
Q Consensus 67 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~r 145 (336)
..++...|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++++.+++ .|
T Consensus 36 ~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 115 (455)
T TIGR00892 36 KAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAG 115 (455)
T ss_pred cchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 44666788899999999999999999999999999999999999999999999999999999999999999888765 57
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhcc-
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFFI- 220 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~- 220 (336)
++.|++.+...+....++.++++ ++|+++.++.+.+..+|..++|.+++.+ |||+.|++.+++.++..+..+++
T Consensus 116 ~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 116 FITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMR 194 (455)
T ss_pred HHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999998777777888899996 7899999999999999998888877654 89999999888776655444333
Q ss_pred cCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchH
Q 019729 221 PESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGIN 300 (336)
Q Consensus 221 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (336)
++.+.. .+.+.++ . +...... +.+ +.+. ....+...+....++++++.++....... ....+.+
T Consensus 195 ~~~~~~--~~~~~~~-~---~~~~~~~-~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~ 258 (455)
T TIGR00892 195 PVGPSQ--RVSKSKS-K---EGLPPDG-STK----KLSK-KSTAEKINRFLDFSLFTHRGFLVYLSGNV----IMFLGFF 258 (455)
T ss_pred CCCccc--ccccccc-c---ccCCCCC-ccc----cccc-cchhhhhhhhcchHHhcCchHHHHHHHHH----HHHHHcc
Confidence 322110 0000000 0 0000000 000 0000 00000001111124555554443333222 2222344
Q ss_pred HHHHhHHHHHHhcCCCCcchhHHHHHHHHhh
Q 019729 301 GVLFYSSNIFANAGKINISLDVILPIVEALN 331 (336)
Q Consensus 301 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~g 331 (336)
....|+|.+.++.|++..+++.++++.++.+
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~ 289 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLSIIGFVD 289 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5667888888888999988888877655543
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.88 E-value=1.7e-20 Score=170.34 Aligned_cols=152 Identities=17% Similarity=0.145 Sum_probs=129.0
Q ss_pred chhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 019729 70 SPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEG 149 (336)
Q Consensus 70 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 149 (336)
....+.+.++++.+..+.+++.+++.+.+.+.++++|+++||+|||++++++.++.+++.+++.++++. ++.|+++|
T Consensus 23 ~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G 99 (393)
T PRK11195 23 LFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVG 99 (393)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 344555678899999999999999999999999999999999999999999999999888887776654 67899999
Q ss_pred HHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc---hhHHHHHHhHHHHHHHHHHhhcccCch
Q 019729 150 FGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---NWRVLAVLGVLPCTLLIPGLFFIPESP 224 (336)
Q Consensus 150 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~~~~~~~e~~ 224 (336)
++.+...|...+++.|++|+++|++++++.+....+|.++||.+++.+ .|+..+.+.+...++..+..+.+||+|
T Consensus 100 ~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 100 IGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999999999999999999999999999776 455555555444444445556778765
No 61
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.87 E-value=2.6e-20 Score=169.78 Aligned_cols=165 Identities=12% Similarity=0.149 Sum_probs=143.9
Q ss_pred HHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 019729 53 LVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLII 132 (336)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 132 (336)
..++...+..|+..+...+..|.+++++|++..+.+++.+.+.+++.+++++.|++.||+|||+++.++.++.+++.+++
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~ 85 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLF 85 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 34455567777777888899999999999999999999999999999999999999999999999999999999998886
Q ss_pred Hh---hcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc------------
Q 019729 133 SF---SKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------------ 197 (336)
Q Consensus 133 ~~---~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------------ 197 (336)
.. .++++.+++.|++.|++.|...+....++.+..|+++|++..++.+....+|..++|.++..+
T Consensus 86 ~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~ 165 (410)
T TIGR00885 86 WPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDV 165 (410)
T ss_pred HHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhh
Confidence 54 358899999999999999999999999999999999999999999999999999888876433
Q ss_pred ------------------hhHHHHHHhHHHHHHHHHHh
Q 019729 198 ------------------NWRVLAVLGVLPCTLLIPGL 217 (336)
Q Consensus 198 ------------------~w~~~~~~~~~~~~~~~~~~ 217 (336)
+||++|++.+++.++..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 166 LDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 49999988877666554433
No 62
>PRK10504 putative transporter; Provisional
Probab=99.87 E-value=2e-20 Score=174.06 Aligned_cols=168 Identities=17% Similarity=0.210 Sum_probs=146.2
Q ss_pred HHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh
Q 019729 56 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS 135 (336)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 135 (336)
+++.+...++....++..|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~ 95 (471)
T PRK10504 16 AFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS 95 (471)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh
Confidence 34445556666777788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHH
Q 019729 136 KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCT 211 (336)
Q Consensus 136 ~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~ 211 (336)
++++.+++.|+++|++.+...+....++.|++|+++|+++.++......+|..++|.+++.+ +||+.|++...+.+
T Consensus 96 ~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~ 175 (471)
T PRK10504 96 GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGI 175 (471)
T ss_pred CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888654 89999998877666
Q ss_pred HHHHHh-hcccCc
Q 019729 212 LLIPGL-FFIPES 223 (336)
Q Consensus 212 ~~~~~~-~~~~e~ 223 (336)
+..+.. ...|++
T Consensus 176 l~~~~~~~~~~~~ 188 (471)
T PRK10504 176 IGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHhCCCc
Confidence 554433 344544
No 63
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.86 E-value=9.7e-20 Score=166.01 Aligned_cols=224 Identities=14% Similarity=0.034 Sum_probs=155.1
Q ss_pred hhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHH---h-hcchhHHHHHHH
Q 019729 71 PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIIS---F-SKDSSFLFMGRL 146 (336)
Q Consensus 71 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~~r~ 146 (336)
+..+.+.+++|.+..+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++. . .++++.+++.|+
T Consensus 34 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (402)
T TIGR00897 34 GWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYG 113 (402)
T ss_pred HhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHH
Confidence 345566788999999999999999999999999999999999999999999999988876553 3 257788888999
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHH-HHHHHhhcc----chhHHHHHHhHHHHHHHH-HHhhcc
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGI-MLAYLLGLF----VNWRVLAVLGVLPCTLLI-PGLFFI 220 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~----~~w~~~~~~~~~~~~~~~-~~~~~~ 220 (336)
+.|++.+...+.....+.+++|+++|++++|+.+.+..+|. .++|.+++. .||+..+|......++.. +..++.
T Consensus 114 i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 193 (402)
T TIGR00897 114 IRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSN 193 (402)
T ss_pred HHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999888888888889999999999999999999999986 578877654 376655554333323222 223334
Q ss_pred cCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchH
Q 019729 221 PESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGIN 300 (336)
Q Consensus 221 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (336)
++.++. ++.+ +. ++ ..+....++++++++..+...+. .+.+..+.+
T Consensus 194 ~~~~~~--~~~~-------------~~----~~-----------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 239 (402)
T TIGR00897 194 KDIFTP--QHMQ-------------TR----EK-----------FSELGKAATILFTNPNVLLGGMV----RIINTIGLF 239 (402)
T ss_pred CCCCCc--cccc-------------CC----cc-----------hhhHHHHHHHHHcChhHHHHHHH----HHHHHHHHH
Confidence 433210 0000 00 00 00011224456666544333222 223333456
Q ss_pred HHHHhHHHHHHhcCCCCcchhHHHHHHH
Q 019729 301 GVLFYSSNIFANAGKINISLDVILPIVE 328 (336)
Q Consensus 301 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 328 (336)
.+..|.|.++++.|++..+.+.+.+...
T Consensus 240 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~ 267 (402)
T TIGR00897 240 GFAVFLPMFVAELGFSTSEWLQIWGTFF 267 (402)
T ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHH
Confidence 7788999999888999888776655433
No 64
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.86 E-value=7.1e-20 Score=164.17 Aligned_cols=221 Identities=19% Similarity=0.226 Sum_probs=162.0
Q ss_pred cccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 019729 67 GYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRL 146 (336)
Q Consensus 67 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 146 (336)
....+.+|.+.+++|++.++.+++.+++.++..+++++.|+++||+|||+++.++.++..++.+.+ ..++.+.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 566788999999999999999999999999999999999999999999999999998888888777 7788889999999
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc------hhHHHHHHhHHHHHHHHHHhhcc
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFI 220 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~~~~~~~~~~~ 220 (336)
+.|++.+...+....++.|++| ++|+++.++.+.+..+|..+++.++..+ +||+.|.+.+++.++... .++
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~--~~~ 172 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL--AWI 172 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--HHh
Confidence 9999999888888889999986 6899999999999888888887776543 388888776654443322 233
Q ss_pred cCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchH
Q 019729 221 PESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGIN 300 (336)
Q Consensus 221 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (336)
|+.++ +.+ ++ ++..+...++.++++..+...+. .+.....++
T Consensus 173 ~~~~~------~~~-----------~~-----------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 214 (355)
T TIGR00896 173 PQVRR------RVA-----------AN-----------------QTTTRLTPVRIWRSPLAWQVTVF----FGLQSGLYY 214 (355)
T ss_pred hhhcc------ccC-----------CC-----------------CCCCCCCCchhhcCHhHHHHHHH----HHHHHHHHH
Confidence 43321 000 00 00001123345555443332222 222222345
Q ss_pred HHHHhHHHHHHhcCCCCcchhHHHHHHHH
Q 019729 301 GVLFYSSNIFANAGKINISLDVILPIVEA 329 (336)
Q Consensus 301 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 329 (336)
....|+|.++++.|.+..+.+.+.++..+
T Consensus 215 ~~~~~lp~~~~~~g~~~~~~g~~~~~~~~ 243 (355)
T TIGR00896 215 SLIGWLPAILISHGASAATAGSLLALMQL 243 (355)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 67778999998889988887777665444
No 65
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.86 E-value=1.5e-19 Score=164.62 Aligned_cols=153 Identities=17% Similarity=0.305 Sum_probs=134.7
Q ss_pred chhhH-hHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 019729 70 SPTQA-EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLE 148 (336)
Q Consensus 70 ~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 148 (336)
.+..+ .+++++|.+..+.|++.+...+...+..++.|+++||+|||+++..+.++.+++.+++.+.++++.+++.|++.
T Consensus 30 ~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 109 (400)
T PRK11646 30 FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILS 109 (400)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34444 35788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc---hhHHHHHHhHHHHHHHHH-HhhcccC
Q 019729 149 GFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---NWRVLAVLGVLPCTLLIP-GLFFIPE 222 (336)
Q Consensus 149 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~-~~~~~~e 222 (336)
|++.+...+...+++.|++|+++|+++.++.+....+|..+||.+++.+ +||+.|++.++..++..+ ..+++||
T Consensus 110 g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 110 GLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999888899999999999999999999999999999999999988766 899999988776655533 3344554
No 66
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=2.7e-20 Score=162.11 Aligned_cols=230 Identities=15% Similarity=0.196 Sum_probs=176.9
Q ss_pred ccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchh---H
Q 019729 64 FTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---F 140 (336)
Q Consensus 64 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~---~ 140 (336)
+....+++..+.+.+++|+|++|.+++.++..+...+..++.|.+.||||.|++..++.++..+.++..+++.+++ +
T Consensus 28 ~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ 107 (417)
T COG2223 28 MVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQ 107 (417)
T ss_pred HHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 3455667778888999999999999999999999999999999999999999999999999999999999986554 9
Q ss_pred HHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHH----HHHHHHhhccch---hHHHHHHhHHHHHHH
Q 019729 141 LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIG----IMLAYLLGLFVN---WRVLAVLGVLPCTLL 213 (336)
Q Consensus 141 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g----~~~~~~~~~~~~---w~~~~~~~~~~~~~~ 213 (336)
+++++++.|++ |..+++...+++++||++++|.++|+.. ..++| .+++|.+....+ |+....+..+..++.
T Consensus 108 ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~ 185 (417)
T COG2223 108 LLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIA 185 (417)
T ss_pred HHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999997 4788999999999999999999999986 55555 555666666667 998888777766665
Q ss_pred -HHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHH
Q 019729 214 -IPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLV 292 (336)
Q Consensus 214 -~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (336)
+..++.+.|.|....+.+ ...+...+.+++++..|.+ .+..
T Consensus 186 ~v~~~~~~~d~p~~r~~~~----------------------------------~~~~~~~~~v~~~~~~W~l----sllY 227 (417)
T COG2223 186 AVLAWLGMNDVPEHRASVK----------------------------------PQLPAQLKAVFSNKDTWLL----SLLY 227 (417)
T ss_pred HHHHHHHhCCChhhhcccc----------------------------------ccchhHHHHHhcCcchHHH----HHHH
Confidence 445556666654210000 0000234455555543333 3334
Q ss_pred HHHhhchHHHHHhHHHHHHhc-CCCCcchhHHHHHHHHhhhh
Q 019729 293 LQQLSGINGVLFYSSNIFANA-GKINISLDVILPIVEALNST 333 (336)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~g~~ 333 (336)
+..+.++..+..++|.++++. |.++.+++.+...+.+.|+.
T Consensus 228 ~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l 269 (417)
T COG2223 228 FATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGAL 269 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHH
Confidence 445556778999999998766 99999999888888887764
No 67
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.86 E-value=7.9e-20 Score=166.48 Aligned_cols=156 Identities=17% Similarity=0.167 Sum_probs=129.1
Q ss_pred hhhccccccchhhHh-HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh---c
Q 019729 61 QFGFTCGYSSPTQAE-IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---K 136 (336)
Q Consensus 61 ~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~ 136 (336)
...+...+..+.+|. +++++|.|..+.+++.+++.+++.+++++.|+++||+|||++++.+.++.+++.+.+.++ +
T Consensus 26 ~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~ 105 (399)
T PRK05122 26 ISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLA 105 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhh
Confidence 333445556677776 578899999999999999999999999999999999999999999998888776655443 2
Q ss_pred -----chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhH
Q 019729 137 -----DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGV 207 (336)
Q Consensus 137 -----~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~ 207 (336)
+++.+++.|++.|++.+...+....++.|++|+++|+++.++...+..+|..+++.+++.+ +|++.+++.+
T Consensus 106 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~ 185 (399)
T PRK05122 106 AWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIM 185 (399)
T ss_pred ccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 4567899999999999999999999999999999999999998888888888887777544 8998888766
Q ss_pred HHHHHHHHH
Q 019729 208 LPCTLLIPG 216 (336)
Q Consensus 208 ~~~~~~~~~ 216 (336)
+..++..+.
T Consensus 186 ~~~~~~~~~ 194 (399)
T PRK05122 186 LLALLGLLL 194 (399)
T ss_pred HHHHHHHHH
Confidence 665544433
No 68
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.86 E-value=1.1e-19 Score=164.03 Aligned_cols=167 Identities=14% Similarity=0.222 Sum_probs=133.6
Q ss_pred hhhhhccccccchhhHh-HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHH-HHHHHHHHHHHHHhhc
Q 019729 59 PIQFGFTCGYSSPTQAE-IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMI-AAVPNIIGWLIISFSK 136 (336)
Q Consensus 59 ~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~~~ 136 (336)
++..++..+...|.+|. +++++|.+..+.+++.+++.++..+.+++.|.++||+||||.++. +..+.+++.+++++++
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 85 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNR 85 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcc
Confidence 34445566666777776 567899999999999999999999999999999999999887654 5666667778888899
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhH--HhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHH
Q 019729 137 DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSL--GSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPC 210 (336)
Q Consensus 137 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~ 210 (336)
+++.+++.|++.|.+.+...+...++..|+.|++.|+.. .+....+..+|..++|.+++.+ +||+.|++.+++.
T Consensus 86 ~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~ 165 (375)
T TIGR00899 86 NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAF 165 (375)
T ss_pred hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHH
Confidence 999999999999988888888888899999887777654 5677777778888888777544 8999999988876
Q ss_pred HHHHHH-hhcccCchh
Q 019729 211 TLLIPG-LFFIPESPR 225 (336)
Q Consensus 211 ~~~~~~-~~~~~e~~~ 225 (336)
++..+. ++++||.|+
T Consensus 166 ~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 166 VLCGVLVWLFLPSYPR 181 (375)
T ss_pred HHHHHHHHHhCCCccc
Confidence 666444 455787654
No 69
>PRK10054 putative transporter; Provisional
Probab=99.85 E-value=8.8e-20 Score=165.79 Aligned_cols=159 Identities=14% Similarity=0.176 Sum_probs=136.1
Q ss_pred cccccchhhHh-HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 019729 65 TCGYSSPTQAE-IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFM 143 (336)
Q Consensus 65 ~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (336)
......+.+|. +.+++|++..+.+++.+++.+++.+++++.|+++||+|||++++++.++.+++.++.+++++++.+++
T Consensus 22 g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (395)
T PRK10054 22 GRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVL 101 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 33444455544 56789999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc---hhHHHHHHhHHHHHHHHHH-hhc
Q 019729 144 GRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---NWRVLAVLGVLPCTLLIPG-LFF 219 (336)
Q Consensus 144 ~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~~-~~~ 219 (336)
+|++.|.+.+...+...++..|.+|+++|+++.++.+....+|.+++|.+++.+ +|+..|++.+++.++.++. .++
T Consensus 102 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~ 181 (395)
T PRK10054 102 FFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIW 181 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHH
Confidence 899999888888888999999999999999999999999999999999998766 8999999888777666443 344
Q ss_pred ccCc
Q 019729 220 IPES 223 (336)
Q Consensus 220 ~~e~ 223 (336)
+|++
T Consensus 182 ~~~~ 185 (395)
T PRK10054 182 VQRS 185 (395)
T ss_pred Hhcc
Confidence 5544
No 70
>PRK12382 putative transporter; Provisional
Probab=99.85 E-value=2.6e-19 Score=162.74 Aligned_cols=149 Identities=19% Similarity=0.221 Sum_probs=123.6
Q ss_pred ccccccchhhHh-HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHH---h-----
Q 019729 64 FTCGYSSPTQAE-IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIIS---F----- 134 (336)
Q Consensus 64 ~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~----- 134 (336)
...+...|.+|. +.+++|.|..+.+++.+++.++..++++++|+++||+|||++++++.+...++.+... .
T Consensus 29 ~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~ 108 (392)
T PRK12382 29 MTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSA 108 (392)
T ss_pred HHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccch
Confidence 344555667775 5788999999999999999999999999999999999999999999887776554322 1
Q ss_pred hcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHH
Q 019729 135 SKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPC 210 (336)
Q Consensus 135 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~ 210 (336)
.++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+...|..++|.+++.+ +|++.+++..+..
T Consensus 109 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 188 (392)
T PRK12382 109 PFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLP 188 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 246788999999999999998898999999999999999999999998888888888887544 8988776655444
Q ss_pred HH
Q 019729 211 TL 212 (336)
Q Consensus 211 ~~ 212 (336)
++
T Consensus 189 ~~ 190 (392)
T PRK12382 189 LL 190 (392)
T ss_pred HH
Confidence 33
No 71
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.85 E-value=2.1e-19 Score=162.84 Aligned_cols=233 Identities=21% Similarity=0.284 Sum_probs=158.6
Q ss_pred hccccccchhhHhHhhhcc--CCchhHHHHHHH-----HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh
Q 019729 63 GFTCGYSSPTQAEIISDLK--LTISEFSIFGSL-----ANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS 135 (336)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~g--~s~~~~~~~~~~-----~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 135 (336)
.++...++...+.+.+++. .++++.+.+.+. ..++..+++++.|+++||+|||+++.++.++.+++.++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 85 (394)
T TIGR00883 6 WFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC
Confidence 3444445555555666644 344455544433 333445789999999999999999999999999999999999
Q ss_pred cchh--------HHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhc------------
Q 019729 136 KDSS--------FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------------ 195 (336)
Q Consensus 136 ~~~~--------~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~------------ 195 (336)
+++. .+++.|+++|++.+...+....++.|++|+++|++..+..+.+..+|.++++.++.
T Consensus 86 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~ 165 (394)
T TIGR00883 86 PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALL 165 (394)
T ss_pred CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhh
Confidence 8865 47888999999999999999999999999999999999999999999998887652
Q ss_pred cchhHHHHHHhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHH
Q 019729 196 FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAEL 275 (336)
Q Consensus 196 ~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (336)
..+||+.+++.+++.++..+....+||++++..+++ ++++.+...++.
T Consensus 166 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~ 213 (394)
T TIGR00883 166 EWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE--------------------------------KHKKKRGPIRET 213 (394)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh--------------------------------ccccccCCHHHH
Confidence 237999999887776666555556677654211000 000011223444
Q ss_pred hcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHH-hcCCCCcchhHHHHHHHH
Q 019729 276 KRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFA-NAGKINISLDVILPIVEA 329 (336)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~ 329 (336)
++++.+ +..... ...+......+....+.|.+++ +.|.++.+.+.+.....+
T Consensus 214 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 266 (394)
T TIGR00883 214 LTKHRK-PFLLGL-GLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLI 266 (394)
T ss_pred HHhchH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHH
Confidence 444321 122222 2223333345567778888884 458888777766554443
No 72
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.85 E-value=4.5e-20 Score=169.08 Aligned_cols=226 Identities=14% Similarity=0.120 Sum_probs=165.5
Q ss_pred cccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh-----hcchhHH
Q 019729 67 GYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF-----SKDSSFL 141 (336)
Q Consensus 67 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~ 141 (336)
....+..|.+.++++.+..+.+++.+...++..+++++.|+++||+|||+++..+.++.+++.+..+. .++++.+
T Consensus 34 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (417)
T PRK10489 34 GLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAI 113 (417)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 44556778888888889999999999999999999999999999999999999888877776655442 4677888
Q ss_pred HHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHh
Q 019729 142 FMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGL 217 (336)
Q Consensus 142 ~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~ 217 (336)
++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+||.+++.+ +|++.+++.++..++..+..
T Consensus 114 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 114 YLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 89999999999888888899999999999999999999999999999999988665 79999998887777766666
Q ss_pred hcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhh
Q 019729 218 FFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLS 297 (336)
Q Consensus 218 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (336)
+.+|++++.. .+. + + ..++....++..++++..+..++......+
T Consensus 194 ~~l~~~~~~~---~~~-------------~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 238 (417)
T PRK10489 194 LRLPALPPPP---QPR-------------E-H--------------PLRSLLAGFRFLLASPVVGGIALLGGLLTM---- 238 (417)
T ss_pred HhCCCCCCCC---ccc-------------c-c--------------chHHHHHHHHHHHcChHHHHHHHHHHHHHH----
Confidence 6777654310 000 0 0 000011123344555443333332221111
Q ss_pred chHHHHHhHHHHHHh-cCCCCcchhHHHHHHH
Q 019729 298 GINGVLFYSSNIFAN-AGKINISLDVILPIVE 328 (336)
Q Consensus 298 ~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~ 328 (336)
......+.|.++++ .|.++...+.+.+...
T Consensus 239 -~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~ 269 (417)
T PRK10489 239 -ASAVRVLYPALADEVWQMGAAQIGLLYAAVP 269 (417)
T ss_pred -HHhHHHhhHHHHHhccCCChhHhHHHHHHHH
Confidence 23456678888888 5998888877665443
No 73
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.84 E-value=4.4e-19 Score=158.03 Aligned_cols=164 Identities=27% Similarity=0.444 Sum_probs=146.8
Q ss_pred HhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc
Q 019729 57 LGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK 136 (336)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 136 (336)
+..+..++......+..|.+.+++|.+..+.+++.++..++..++.++.|+++||+|||+.+..+.++..++.+++.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 85 (352)
T cd06174 6 LGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFAS 85 (352)
T ss_pred HHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhc
Confidence 34445556667777888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHH
Q 019729 137 DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTL 212 (336)
Q Consensus 137 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~ 212 (336)
+++.+++.|++.|++.+...+...+++.|++|+++|++..++.+....+|..+++.+++.+ +||+.+++.+++.++
T Consensus 86 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (352)
T cd06174 86 SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLL 165 (352)
T ss_pred cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988765 699999988887776
Q ss_pred HHHHhhcc
Q 019729 213 LIPGLFFI 220 (336)
Q Consensus 213 ~~~~~~~~ 220 (336)
..+...++
T Consensus 166 ~~~~~~~~ 173 (352)
T cd06174 166 LALLLLFL 173 (352)
T ss_pred HHHHHHHH
Confidence 65554443
No 74
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.84 E-value=1.2e-18 Score=159.01 Aligned_cols=165 Identities=20% Similarity=0.152 Sum_probs=138.4
Q ss_pred hhhhhhccccccchhhHhHhhhccCCchh-----HHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 019729 58 GPIQFGFTCGYSSPTQAEIISDLKLTISE-----FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLII 132 (336)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 132 (336)
+.+..++......+.+|.+.+++|.+..+ .+++.++..++..+++++.|+++||+|||+++..+.++.+++.+++
T Consensus 22 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 101 (408)
T PRK09874 22 GCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLM 101 (408)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHH
Confidence 33444455566778889999999988654 4888999999999999999999999999999999999999999998
Q ss_pred HhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHH
Q 019729 133 SFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVL 208 (336)
Q Consensus 133 ~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~ 208 (336)
.+.++++.+++.|++.|++.+ ..+....++.+++|+++|+++.++.+.+..+|.+++|.+++.+ +||+.+++.++
T Consensus 102 ~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 180 (408)
T PRK09874 102 GLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITAS 180 (408)
T ss_pred HHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 899999999999999999754 5677788999999999999999999999999999998888654 89999998887
Q ss_pred HHHHHHHH-hhcccCc
Q 019729 209 PCTLLIPG-LFFIPES 223 (336)
Q Consensus 209 ~~~~~~~~-~~~~~e~ 223 (336)
+.++..+. .+++||.
T Consensus 181 ~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 181 VLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHhccC
Confidence 76665443 4455654
No 75
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.83 E-value=1.3e-18 Score=155.94 Aligned_cols=229 Identities=14% Similarity=0.154 Sum_probs=159.2
Q ss_pred ccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-----chhHH-HHHHHHHHHHHHHHHHhh---c
Q 019729 66 CGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI-----GRKGS-LMIAAVPNIIGWLIISFS---K 136 (336)
Q Consensus 66 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~ 136 (336)
....++..|.+.+++|+|.++.+++..+ .+...+ .+++|+++||+ ||||. ++.+.++.+++.+..++. .
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 3455677888999999999999998755 444444 99999999998 89887 456777777777777776 3
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----h--------hHHHHH
Q 019729 137 DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----N--------WRVLAV 204 (336)
Q Consensus 137 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~--------w~~~~~ 204 (336)
+.+.+....++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+ + ||..|+
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFF 161 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHH
Confidence 4556677777888888888899999999999999999999999999999999998888543 6 999999
Q ss_pred HhHHHHHHHHHHhh-cccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHH
Q 019729 205 LGVLPCTLLIPGLF-FIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFP 283 (336)
Q Consensus 205 ~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (336)
+.++..++..+..+ ..||+++. + +. + . ++ +++....++++++++..++
T Consensus 162 i~ai~~l~~~~~~~~~~~e~~~~---~-~~---------------~-~---~~--------~~~~~~~~~~~~~~~~~~~ 210 (356)
T TIGR00901 162 WTALLILPGLLVTLFLAKEPQED---A-SV---------------P-K---PL--------TQAVLKPIREFFQRKNMIQ 210 (356)
T ss_pred HHHHHHHHHHHHHHHhccCCCcc---c-cc---------------c-h---hH--------HHHHHHHHHHHHHhcCchH
Confidence 98887777655544 34664220 0 00 0 0 00 0001223455666654333
Q ss_pred HHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCcchhHHHHHHH
Q 019729 284 LMIGIGLLVLQQLSGINGVLFYSSNIFANAGKINISLDVILPIVE 328 (336)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 328 (336)
.+..+....+. ....+....+.|.++.+.|+++.+.+.+.++.+
T Consensus 211 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~ 254 (356)
T TIGR00901 211 ALLLLLLIVLY-KLGDSAATVLTTLFLLDMGFSKEEIALVAKING 254 (356)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHH
Confidence 33332222222 233456667788888888999888877665433
No 76
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=2.8e-19 Score=153.04 Aligned_cols=144 Identities=15% Similarity=0.203 Sum_probs=119.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhH
Q 019729 80 LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTV 159 (336)
Q Consensus 80 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 159 (336)
.+.+..-.|.+.+.+.+++.+.++.+|.++||+|||+++++|++..++...+.+.++|+..+++.|++.|+.. +...+.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~k-gnl~v~ 141 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFK-GNLSVI 141 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-CchHHH
Confidence 3334455799999999999999999999999999999999999999999999999999977777799999998 467778
Q ss_pred hHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccchh------HHHH----HHhHHHHHH-HHHHhhcccCch
Q 019729 160 PVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNW------RVLA----VLGVLPCTL-LIPGLFFIPESP 224 (336)
Q Consensus 160 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~w------~~~~----~~~~~~~~~-~~~~~~~~~e~~ 224 (336)
.++++|.+++|+|+.+++.++..+++|.++||++++++.- +.+| ++..+++.. .....+++|||-
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 8999999999999999999999999999999999988732 1112 222233333 234556789984
No 77
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.81 E-value=6e-18 Score=146.63 Aligned_cols=237 Identities=14% Similarity=0.137 Sum_probs=186.3
Q ss_pred HHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHH
Q 019729 54 VVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIIS 133 (336)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 133 (336)
.++...++.|+......+.+|.+++.++++..+++++...+..++.+.+++.|++.+|+|+|+.+++++.++++++.++.
T Consensus 17 ~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~ 96 (422)
T COG0738 17 LLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFW 96 (422)
T ss_pred HHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHh
Confidence 33444566777777888899999999999999999999999999999999999999999999999999999999999885
Q ss_pred ---hhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-------------
Q 019729 134 ---FSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------------- 197 (336)
Q Consensus 134 ---~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------------- 197 (336)
...++..++++-++.|.|.+...+..+.+++...+++.-...+.+.+...++|.+++|++++.+
T Consensus 97 pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~ 176 (422)
T COG0738 97 PAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQ 176 (422)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHH
Confidence 4567889999999999999999999999999999999889999999999999999999998544
Q ss_pred ----------hhHHHHHHhHHHHHHHHHHhhc--ccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhc
Q 019729 198 ----------NWRVLAVLGVLPCTLLIPGLFF--IPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSS 265 (336)
Q Consensus 198 ----------~w~~~~~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (336)
.|+++|...+...++..+.... .|+.+. ...+..
T Consensus 177 ~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~----------------------------------~~~~~~ 222 (422)
T COG0738 177 ILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV----------------------------------AAPSLG 222 (422)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc----------------------------------cccccc
Confidence 2666777666555544443332 333211 000001
Q ss_pred hhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHh-cCCCCcchhHHHHHHH
Q 019729 266 RRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFAN-AGKINISLDVILPIVE 328 (336)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~ 328 (336)
+.+.....++++++..+.-.++..++...+ ..+..|++.++.+ .|.+..+++..++...
T Consensus 223 ~~~~~~~~~l~~~~~~~~gvl~~FlYVG~E----va~gsfl~~y~~~~~g~~~~~aa~~~s~~~ 282 (422)
T COG0738 223 ASGSAGLSSLFQNKHLRLGVLAIFLYVGAE----VAIGSFLVSYLEELLGLNEQQAAYYLSFFW 282 (422)
T ss_pred ccccchHHHHHhChHHHHHHHHHHHHHhHH----HHHHHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 111115678888888777777666666655 4688899999988 5888888887766543
No 78
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.81 E-value=7.4e-18 Score=153.68 Aligned_cols=232 Identities=14% Similarity=0.115 Sum_probs=166.1
Q ss_pred hhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-----chhH-HHHHHHHHHHHHHHHH
Q 019729 59 PIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI-----GRKG-SLMIAAVPNIIGWLII 132 (336)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~~~~~ 132 (336)
++..|+..+.....+|.+.++.|+|.++.|++..+... .+..+++|+++||+ |||| .++++.++.+++..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 45556677777788899999999999999999777765 69999999999999 8765 6888888888888777
Q ss_pred Hhhc---chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc-----chhHHHHH
Q 019729 133 SFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF-----VNWRVLAV 204 (336)
Q Consensus 133 ~~~~---~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~-----~~w~~~~~ 204 (336)
++.+ +.+.+++..++.++..+...++..+++.|++|+++|+++.++...+..+|.++++.++.. .+||..|+
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~ 165 (402)
T PRK11902 86 AFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYL 165 (402)
T ss_pred HhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHH
Confidence 7763 466677777888888888999999999999999999999999999989998888776533 38999999
Q ss_pred HhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHH
Q 019729 205 LGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPL 284 (336)
Q Consensus 205 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (336)
+.++..++..+..+++||+++.. ++.++ . +++....++++++++.++..
T Consensus 166 i~a~~~l~~~l~~~~~~e~~~~~---~~~~~---------------------~-------~~~~~~~~~~l~~~~~~~~~ 214 (402)
T PRK11902 166 LMAGLMLAGALTTLWAPEPEVPA---RPPRS---------------------L-------GEAVVGPLRDFFSRRGAWAL 214 (402)
T ss_pred HHHHHHHHHHHHHHhcCCCcccc---cccch---------------------h-------HHHHHHHHHHHHhCcCHHHH
Confidence 98887766655556677754310 00000 0 00112345677788776665
Q ss_pred HHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCcchhHHHHH
Q 019729 285 MIGIGLLVLQQLSGINGVLFYSSNIFANAGKINISLDVILPI 326 (336)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 326 (336)
++...+....... ......+.+.++.|+++.+.+.+++.
T Consensus 215 l~~~~l~~~~~~~---~~~~~~~~l~~~~G~~~~~~g~~~~~ 253 (402)
T PRK11902 215 LLLIVLYKLGDAF---AGSLSTTFLIRGAGFSAGEVGIVNKT 253 (402)
T ss_pred HHHHHHHHhHHHH---HHHHHHHHHHHhcCCCHHHHHHHHhH
Confidence 5543333322211 11223344556679998888887644
No 79
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.81 E-value=4.5e-18 Score=154.02 Aligned_cols=235 Identities=10% Similarity=0.007 Sum_probs=159.4
Q ss_pred HhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH-HHHHHH-HHHHHh
Q 019729 57 LGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAA-VPNIIG-WLIISF 134 (336)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~-~~~~~~-~~~~~~ 134 (336)
+.++...+..+...|.+|.+.+++|.|..+.+++.+++.+...++++++|.++||+|||....... ....+. ...+..
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAG 90 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444455577788899999999999999999999999999999999999999999854332111 111111 224446
Q ss_pred hcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHH
Q 019729 135 SKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPC 210 (336)
Q Consensus 135 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~ 210 (336)
+++++.+++.|.++|.+.+...+...++..++ .++|++..|....+.++|.+++|.+++.+ |||..|++..+..
T Consensus 91 ~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~ 168 (382)
T TIGR00902 91 AHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGL 168 (382)
T ss_pred hhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH
Confidence 78899999999999998888888888887765 47889999999999999999999887655 8999888766543
Q ss_pred HHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHH
Q 019729 211 TLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGL 290 (336)
Q Consensus 211 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (336)
++.++.. .++++++. +++ ++ +++.......++++|++..+...+...+
T Consensus 169 ~~~~~~~-~~~~~~~~---~~~-~~---------------------------~~~~~~~~~~~~~l~~~~~~~~l~~~~l 216 (382)
T TIGR00902 169 AFMLIGF-LIKPTIPP---KDA-IP---------------------------EDESQGDSAFIALLKNPMNLRFLAAVCL 216 (382)
T ss_pred HHHHHHH-HcCCCCCC---Ccc-cc---------------------------ccccccchhHHHHHcChHHHHHHHHHHH
Confidence 3333332 33333210 000 00 0000011235567777655444433333
Q ss_pred HHHHHhhchHHHHHhHHHHHHhcCCCCcchhHHHHHHHH
Q 019729 291 LVLQQLSGINGVLFYSSNIFANAGKINISLDVILPIVEA 329 (336)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 329 (336)
.. .+......+.|.++++.|.++.+.+.+.++..+
T Consensus 217 ~~----~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~ 251 (382)
T TIGR00902 217 IQ----GAHAAYYGFSAIYWQAAGISASATGLLWGIGVL 251 (382)
T ss_pred HH----HHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHH
Confidence 22 234456668888888899999888887765433
No 80
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.81 E-value=1.4e-18 Score=162.42 Aligned_cols=174 Identities=11% Similarity=0.056 Sum_probs=133.4
Q ss_pred hhHhH-hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHH---HHhhcchhHHHHHHHH
Q 019729 72 TQAEI-ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLI---ISFSKDSSFLFMGRLL 147 (336)
Q Consensus 72 ~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~r~l 147 (336)
..|.+ ++++|.+..+.++..+...++..++.++.|+++||+|||+.+.++.++..++.+. ...+++...+++++++
T Consensus 272 ~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (490)
T PRK10642 272 YMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLM 351 (490)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 44544 4668998888888888889999999999999999999999988877654433322 2233456777888999
Q ss_pred HHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHHHHHHhhcccC
Q 019729 148 EGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLFFIPE 222 (336)
Q Consensus 148 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~~~~e 222 (336)
.|++.+...+....++.|.+|++.|+++.++.+....+++.++|.+.+++ +|+..+++..+++++.++..+++||
T Consensus 352 ~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pe 431 (490)
T PRK10642 352 LAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKE 431 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 99888877788888999999999999999974433445556677666543 4677777667777777777777899
Q ss_pred chhHHHHc-----CChHHHHHHHHHHhC
Q 019729 223 SPRWLAKM-----GMTEDFESSLQVLRG 245 (336)
Q Consensus 223 ~~~~~~~~-----~~~~~~~~~~~~~~~ 245 (336)
+|+++.++ ++.+|+.+.+++++.
T Consensus 432 s~~~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 432 TANRPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred ccCCCCCCccccccchhhHHHHhhcccc
Confidence 99988755 888999999998874
No 81
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.81 E-value=5.7e-18 Score=153.39 Aligned_cols=226 Identities=11% Similarity=0.034 Sum_probs=155.6
Q ss_pred ccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchh----HHHHHHHHHHHHHHHHHHhhcchh
Q 019729 64 FTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRK----GSLMIAAVPNIIGWLIISFSKDSS 139 (336)
Q Consensus 64 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~~~~~ 139 (336)
...+...|.+|.+.+++|.|..+.|++.+++.++..++++++|.++||+||| +.+.++..+ ........+++++
T Consensus 18 ~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 95 (382)
T PRK11128 18 FAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--FAVAFWFGAHSFW 95 (382)
T ss_pred HHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--HHHHHHHhcccHH
Confidence 3446677888889999999999999999999999999999999999999984 333222222 1223334467899
Q ss_pred HHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHH
Q 019729 140 FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 140 ~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~ 215 (336)
.+++.|++.|++.+...+...+++.++ .++|++..+.......+|..++|.+++.+ +||..|++.++..++..+
T Consensus 96 ~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~ 173 (382)
T PRK11128 96 LLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL 173 (382)
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 999999999999888888888887776 35688888888888888888888888655 999999887765554444
Q ss_pred HhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHH
Q 019729 216 GLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQ 295 (336)
Q Consensus 216 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (336)
..++.||.++ +++.+ ++.++...+++++++++..+...+..++....
T Consensus 174 ~~~~~~~~~~----~~~~~----------------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~- 220 (382)
T PRK11128 174 GQLLRPTIMP----QGESR----------------------------QQESAGWPAWKALLKEPTVWRFLLCVSLLQGS- 220 (382)
T ss_pred HHHccCCCCC----ccccc----------------------------cccccccchHHHHHcChhHHHHHHHHHHHHHH-
Confidence 4444454321 00000 00001123467777777655544433333222
Q ss_pred hhchHHHHHhHHHHHHhcCCCCcchhHHHHHHHH
Q 019729 296 LSGINGVLFYSSNIFANAGKINISLDVILPIVEA 329 (336)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 329 (336)
+.....+.|.+.++.|.++.+.+.+.++..+
T Consensus 221 ---~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~ 251 (382)
T PRK11128 221 ---HAAYYGFSAIYWQAAGYSASTIGYLWSLGVV 251 (382)
T ss_pred ---hHhHHHHHHHHHHHCCCCHhHHHHHHHHHHH
Confidence 2345566677888889998888887765444
No 82
>PTZ00207 hypothetical protein; Provisional
Probab=99.80 E-value=1.4e-17 Score=155.36 Aligned_cols=166 Identities=12% Similarity=0.119 Sum_probs=131.0
Q ss_pred cchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh------cchhHHH
Q 019729 69 SSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS------KDSSFLF 142 (336)
Q Consensus 69 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~~~ 142 (336)
++...+.+++++|++..+.+++.++. .....++++.|++.||+|+|+++.++.++.+++.++++++ ++++.++
T Consensus 46 fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~ 124 (591)
T PTZ00207 46 FNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLS 124 (591)
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHH
Confidence 34567779999999999999988774 3445678889999999999999999999999999999987 6889999
Q ss_pred HHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHH-HHHhhccc--hhHHHHHHhHHHHHHH-HHHhh
Q 019729 143 MGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIML-AYLLGLFV--NWRVLAVLGVLPCTLL-IPGLF 218 (336)
Q Consensus 143 ~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~--~w~~~~~~~~~~~~~~-~~~~~ 218 (336)
+.|++.|++.+...+.....+.+|+| ++||.+.|+...+.++|.++ +++....+ +|+..+++.+++.++. ++.++
T Consensus 125 l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~ 203 (591)
T PTZ00207 125 VYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999997 78999999999999999975 55555444 7888888777666555 33444
Q ss_pred ccc--CchhHHHHcCChHHH
Q 019729 219 FIP--ESPRWLAKMGMTEDF 236 (336)
Q Consensus 219 ~~~--e~~~~~~~~~~~~~~ 236 (336)
+++ +.+++..++++.+++
T Consensus 204 ~vr~p~~~~~~~~~~~~~~~ 223 (591)
T PTZ00207 204 FMRLPPFHLTGYQEKHLDEE 223 (591)
T ss_pred heeCCcchhhcccccCCCHH
Confidence 444 333433333333333
No 83
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.80 E-value=3.2e-17 Score=140.16 Aligned_cols=242 Identities=21% Similarity=0.209 Sum_probs=190.3
Q ss_pred HHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHH
Q 019729 50 FCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGW 129 (336)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 129 (336)
..+..+.+..+..--..+...|.++.+.+++|+|.+..|+++++..+...+.+++..++..|+|.++.+.+++++.+++.
T Consensus 12 ~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~ 91 (395)
T COG2807 12 LLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGI 91 (395)
T ss_pred HHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33333344445555677788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh----ccc-hhHHHHH
Q 019729 130 LIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG----LFV-NWRVLAV 204 (336)
Q Consensus 130 ~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~----~~~-~w~~~~~ 204 (336)
++-... +.+.++.+-.+.|.+.+......++++.+.|| |+-+..+|+|....++|..+++.+. ... +||....
T Consensus 92 ~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~ 169 (395)
T COG2807 92 LIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALG 169 (395)
T ss_pred HHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHH
Confidence 999887 66778889999999999999999999999998 6679999999998888777776655 333 7999999
Q ss_pred HhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHH
Q 019729 205 LGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPL 284 (336)
Q Consensus 205 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (336)
+-+.++++.++.|+.- ..|. +. ...+.+..+...+++++.-+.
T Consensus 170 ~WAl~allAl~~WlPq--~~r~-----~~-----------------------------~~~~~~~~~~~~vw~~~~aW~- 212 (395)
T COG2807 170 FWALLALLALLIWLPQ--ALRE-----QA-----------------------------ASIATKLVSVRKVWRSPLAWQ- 212 (395)
T ss_pred HHHHHHHHHHHHHhhh--cccc-----cc-----------------------------cccccccccccccccCchhHH-
Confidence 9888888887776532 1110 00 000111222344666654333
Q ss_pred HHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCcchhHHHHHHHHhhhh
Q 019729 285 MIGIGLLVLQQLSGINGVLFYSSNIFANAGKINISLDVILPIVEALNST 333 (336)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~g~~ 333 (336)
..+++..+...+|....|+|.++.|.|+|+.+++.++++..+++..
T Consensus 213 ---vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~ 258 (395)
T COG2807 213 ---VTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLP 258 (395)
T ss_pred ---HHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHH
Confidence 3445556666788999999999999999999999999888876643
No 84
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.80 E-value=1.8e-18 Score=159.95 Aligned_cols=279 Identities=14% Similarity=0.116 Sum_probs=193.0
Q ss_pred ChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 019729 45 SVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVP 124 (336)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 124 (336)
.-+-|.+++...+......-....++...+.++++++.+.++.+|+.++......+..++.+.+.||+|.|.+.++|.++
T Consensus 41 GG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 41 GGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred CCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 33455555555555443333344555678889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhHHHHH-HHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hh
Q 019729 125 NIIGWLIISFSKDSSFLFMG-RLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NW 199 (336)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~-r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w 199 (336)
..++.++.+++++.+++++. .++.|+|.|+.+......+..+|. |+|+.+.|+...+.++|.++-|.+...+ ||
T Consensus 121 ~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~ 199 (509)
T KOG2504|consen 121 AALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGW 199 (509)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCc
Confidence 99999999999999887775 799999999999999999998886 7899999999999999999988888666 99
Q ss_pred HHHHHHhHHHHHHHHHHhhcccC-chhHHHHcCChHHHHHHHH-----------HHhC-CChhhH----HHHHHHHHHhh
Q 019729 200 RVLAVLGVLPCTLLIPGLFFIPE-SPRWLAKMGMTEDFESSLQ-----------VLRG-FDTDIS----IEVNEIKRSVA 262 (336)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~~~-----------~~~~-~~~~~~----~~~~~~~~~~~ 262 (336)
|+.+++.+.+.+-.++.....++ ++..... .++..+..+ +... .+.... ....+.++..+
T Consensus 200 r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (509)
T KOG2504|consen 200 RGALLIFGGISLNVLVAGALLRPLSPPKKPN---EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPD 276 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCCCch---hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCc
Confidence 99998877776666555444333 2221000 000000000 0000 000000 00111111111
Q ss_pred hhc-hhhhhhH----HHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCcchhHHHHHHHHhh
Q 019729 263 SSS-RRTAIRF----AELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANAGKINISLDVILPIVEALN 331 (336)
Q Consensus 263 ~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~g 331 (336)
+.. ...+... .++++++ .++.+.+.......+++....++|.+.++.|++..+++.++++.++..
T Consensus 277 ~~~~~~~~~~~~~~d~~ll~~~----~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~ 346 (509)
T KOG2504|consen 277 KWRNSPLQAFLSMLDLSLLKDP----KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSD 346 (509)
T ss_pred cccccchhhhhhhhhHHHHcCc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhh
Confidence 111 0111112 4666663 344445555555566788999999999999999999999887766644
No 85
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.80 E-value=1.7e-17 Score=154.65 Aligned_cols=162 Identities=15% Similarity=0.232 Sum_probs=130.5
Q ss_pred hhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-----chhHH-HHHHHHHHHHHHHHHHh
Q 019729 61 QFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI-----GRKGS-LMIAAVPNIIGWLIISF 134 (336)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~ 134 (336)
..|.......+.+|.+.++.|.+.++.+.+ +.....+ ++.+++|+++||+ |||+. ++.+.++.+++...+++
T Consensus 23 ~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~ 100 (491)
T PRK11010 23 ASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGF 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 344555667778888889999999998886 3333333 6899999999999 99885 66777777777777766
Q ss_pred h---cchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhc-----cchhHHHHHHh
Q 019729 135 S---KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-----FVNWRVLAVLG 206 (336)
Q Consensus 135 ~---~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~-----~~~w~~~~~~~ 206 (336)
. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++. ..|||..|++.
T Consensus 101 ~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~ 180 (491)
T PRK11010 101 LEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLM 180 (491)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHH
Confidence 5 367788889999999999999999999999999999999999999999999888876553 34899999998
Q ss_pred HHHHHHHHHHhhcccCch
Q 019729 207 VLPCTLLIPGLFFIPESP 224 (336)
Q Consensus 207 ~~~~~~~~~~~~~~~e~~ 224 (336)
++..++..+..+++||++
T Consensus 181 a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 181 AALLIPCIIATLLAPEPT 198 (491)
T ss_pred HHHHHHHHHHHHhcCCCc
Confidence 887777766655678764
No 86
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.78 E-value=2e-17 Score=169.56 Aligned_cols=221 Identities=15% Similarity=0.103 Sum_probs=152.7
Q ss_pred HhhhccCCc-hhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHH---HHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 019729 76 IISDLKLTI-SEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMI---AAVPNIIGWLIISFSKDSSFLFMGRLLEGFG 151 (336)
Q Consensus 76 ~~~~~g~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 151 (336)
+..+.+.+. ...++..+++.+.+.+.++++|+++||+|||+++.. +.+..++..+.....+++++++++|+++|++
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~ 121 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIH 121 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 333344333 346888889999999999999999999999997643 2222233333333458899999999999999
Q ss_pred hhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhcccCchhHH
Q 019729 152 VGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 227 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 227 (336)
.+...++..+++.+++|+++|++++++.+++..+|.++||.+++.+ +|++.|+..++..++.+++.+++|+++..
T Consensus 122 ~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 200 (1140)
T PRK06814 122 SALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA- 200 (1140)
T ss_pred HHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC-
Confidence 9999999999999999999999999999999999999999999876 89988866666666666666677765420
Q ss_pred HHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHH
Q 019729 228 AKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSS 307 (336)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (336)
+... + .+. ...++....++.+.+++.++...+...+.++. ...+..++|
T Consensus 201 --~~~~-~--------------~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p 249 (1140)
T PRK06814 201 --APDL-K--------------IDR----------NIIRSTITLLKYAKADKRIWLAILGISWFWLV----GAVVLSQLP 249 (1140)
T ss_pred --CCCC-e--------------ecc----------chHHHHHHHHHHHhcCchHHHHHHHHHHHHHH----HHHHHHHhH
Confidence 0000 0 000 00001122455666666655554444333332 235666788
Q ss_pred HHHHhc-CCCCcchhHHHHHHH
Q 019729 308 NIFANA-GKINISLDVILPIVE 328 (336)
Q Consensus 308 ~~~~~~-g~s~~~~~~~~~~~~ 328 (336)
.++.+. |.++...+.+++...
T Consensus 250 ~~~~~~~g~~~~~~g~~~~~~~ 271 (1140)
T PRK06814 250 LLAKETLGGDENVATLFLAVFS 271 (1140)
T ss_pred HHHHHHcCCchHHHHHHHHHHH
Confidence 888765 888888877765443
No 87
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.77 E-value=1.3e-17 Score=154.90 Aligned_cols=171 Identities=17% Similarity=0.297 Sum_probs=135.8
Q ss_pred hhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHH
Q 019729 46 VSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPN 125 (336)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 125 (336)
++.+..+...++......+........++.+..++|-+ +...|+.+...++..++.++.|.++|.||||++++.+.++.
T Consensus 40 ~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~ 118 (599)
T PF06609_consen 40 PRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLG 118 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHH
Confidence 34444444445444444455555666788899999965 56789999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHH
Q 019729 126 IIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRV 201 (336)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~ 201 (336)
.++.++++.++|...++++..+.|++.|.... ....++|..|.|.|+...++..........+++.++..+ +|||
T Consensus 119 vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw 197 (599)
T PF06609_consen 119 VVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRW 197 (599)
T ss_pred HhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcch
Confidence 99999999999999999999999999876664 456689999999999888777666555555566666433 8999
Q ss_pred HHHHhHHHHHHHHHHhh
Q 019729 202 LAVLGVLPCTLLIPGLF 218 (336)
Q Consensus 202 ~~~~~~~~~~~~~~~~~ 218 (336)
.|++.++...+.++..+
T Consensus 198 ~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 198 IFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998887766655433
No 88
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.76 E-value=8.8e-17 Score=165.05 Aligned_cols=227 Identities=13% Similarity=0.054 Sum_probs=150.8
Q ss_pred hhHhHhhhccCCch--hHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHH---hhcchhHHHHHHH
Q 019729 72 TQAEIISDLKLTIS--EFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIIS---FSKDSSFLFMGRL 146 (336)
Q Consensus 72 ~~~~~~~~~g~s~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~r~ 146 (336)
..+.+..+++.+.+ ..+++.+++.+++.++++++|+++||+|||++++++.++.+++.++.. ..++++.+++.|+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 111 (1146)
T PRK08633 32 IQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTF 111 (1146)
T ss_pred HHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 34445556666543 468999999999999999999999999999999998876655554433 4578899999999
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-h------------hHHHHHHhH-HHHHH
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-N------------WRVLAVLGV-LPCTL 212 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-~------------w~~~~~~~~-~~~~~ 212 (336)
+.|++.+...++..+++.|++|+++|++++++...+..+|.++++.+++.+ . |++.+.+.. ...++
T Consensus 112 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (1146)
T PRK08633 112 LLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVL 191 (1146)
T ss_pred HHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999888655 1 233333333 23333
Q ss_pred HHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHH
Q 019729 213 LIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLV 292 (336)
Q Consensus 213 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (336)
.++..+.+||+|.....+. ++ . ...........++.+++++..+..++...+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~--~~-------------~-----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 245 (1146)
T PRK08633 192 GLIFAYRLPKVPAAAPEVF--DK-------------K-----------KYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFW 245 (1146)
T ss_pred HHHHHhcCcCCCCCCcccc--cc-------------c-----------ccccHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 4445556777754210000 00 0 00000111223555666665554444333333
Q ss_pred HHHhhchHHHHHhHHHHHHh-cCCCCc-chhHHHHHHH
Q 019729 293 LQQLSGINGVLFYSSNIFAN-AGKINI-SLDVILPIVE 328 (336)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~-~g~s~~-~~~~~~~~~~ 328 (336)
+. .+.+..+.|.++.+ .|++.. ..+++++...
T Consensus 246 ~~----~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ 279 (1146)
T PRK08633 246 FI----SQLAQANFPAYAKEVLGLDNTFQVQYLLAASA 279 (1146)
T ss_pred HH----HHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 22 23455566766654 488887 6666654443
No 89
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.76 E-value=2.3e-16 Score=143.42 Aligned_cols=157 Identities=13% Similarity=0.190 Sum_probs=115.6
Q ss_pred cccchhhHh-HhhhccCCchhHHHHHHHHHH-HHHHHHHHHHHHHhhhchhHHH-HHHHHHHHHHHHHHHhhcchhHHHH
Q 019729 67 GYSSPTQAE-IISDLKLTISEFSIFGSLANV-GAMVGAIASGQIAEYIGRKGSL-MIAAVPNIIGWLIISFSKDSSFLFM 143 (336)
Q Consensus 67 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (336)
....|.+|. +.+++|.+.++.|++.+...+ +..++.+++++ +||+||||.+ ..+.++.+++..+.+++++++.+++
T Consensus 32 ~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (393)
T PRK15011 32 ALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLF 110 (393)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 334455554 578899999999999776555 66666666666 9999998875 4556666677778888888888776
Q ss_pred HHHHHHHHhhhhhhhHhHHHHhccCCCcch--hHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHH-H
Q 019729 144 GRLLEGFGVGVISYTVPVYIAEIAPQNMRG--SLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIP-G 216 (336)
Q Consensus 144 ~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~--~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~-~ 216 (336)
.+.+.|...+...+....++.++.+++.|. ...++.+.+..+|.+++|.+++.+ |||..|++.++..++..+ .
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 190 (393)
T PRK15011 111 VGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMV 190 (393)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 666555555577888888888888766553 345778888888999998888654 999999988877666544 4
Q ss_pred hhcccCch
Q 019729 217 LFFIPESP 224 (336)
Q Consensus 217 ~~~~~e~~ 224 (336)
++++||.+
T Consensus 191 ~~~~~~~~ 198 (393)
T PRK15011 191 WLFLPSMR 198 (393)
T ss_pred HhhcCccC
Confidence 45678764
No 90
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.75 E-value=1.7e-16 Score=144.45 Aligned_cols=157 Identities=15% Similarity=0.083 Sum_probs=113.6
Q ss_pred cccccchhhHhH-hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH---Hhhc----
Q 019729 65 TCGYSSPTQAEI-ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLII---SFSK---- 136 (336)
Q Consensus 65 ~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~---- 136 (336)
......|.+|.+ .+++|.++.+.+++.++..++..+++++.|+++||+|||+.++.+....+++.... .+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (396)
T TIGR00882 17 IMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQS 96 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 334455666654 56689999999999999999999999999999999999999988776665443322 1121
Q ss_pred -chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc---hhHHHHHHhHHHHHH
Q 019729 137 -DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---NWRVLAVLGVLPCTL 212 (336)
Q Consensus 137 -~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~ 212 (336)
....+++.+++.|++.+...+....+..+..+ +++...+.......+|..++|.+++.+ +||..|++.+++.++
T Consensus 97 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~ 174 (396)
T TIGR00882 97 NILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALI 174 (396)
T ss_pred HHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHH
Confidence 22344566888888888878888777777543 344566666677778888888887654 899999998887776
Q ss_pred HHHHhhc-ccCc
Q 019729 213 LIPGLFF-IPES 223 (336)
Q Consensus 213 ~~~~~~~-~~e~ 223 (336)
..+..++ .||+
T Consensus 175 ~~~~~~~~~~~~ 186 (396)
T TIGR00882 175 LMLLLMFAKPKA 186 (396)
T ss_pred HHHHHHHhCCCC
Confidence 6554444 3443
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.73 E-value=3.2e-16 Score=145.48 Aligned_cols=150 Identities=13% Similarity=0.165 Sum_probs=130.3
Q ss_pred chhhHhH-hhh--ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-hchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 019729 70 SPTQAEI-ISD--LKLTISEFSIFGSLANVGAMVGAIASGQIAEY-IGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGR 145 (336)
Q Consensus 70 ~~~~~~~-~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r 145 (336)
.+.+|.+ .++ +|++..+.+++.+++.++..++++++|+++|| +|||+++.++.++.+++.++.+++++++.+++.|
T Consensus 30 ~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~ 109 (475)
T TIGR00924 30 QGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGL 109 (475)
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHH
Confidence 3455555 444 89999999999999999999999999999999 8999999999999999999999988888888999
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCc---chhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhh
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNM---RGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLF 218 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 218 (336)
++.|++.|...+...+++++++|+++ |+.+.++++.+.++|.++||.+++.+ +|++.|++.++..++.++..+
T Consensus 110 ~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 110 GTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998764 88899999999999999999988765 899999987765555544433
Q ss_pred c
Q 019729 219 F 219 (336)
Q Consensus 219 ~ 219 (336)
+
T Consensus 190 ~ 190 (475)
T TIGR00924 190 A 190 (475)
T ss_pred H
Confidence 3
No 92
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.73 E-value=1e-16 Score=149.01 Aligned_cols=175 Identities=12% Similarity=0.093 Sum_probs=134.0
Q ss_pred CCChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-hchhHHHHHH
Q 019729 43 DGSVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEY-IGRKGSLMIA 121 (336)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~ 121 (336)
++++..+.+...-..-.+.++... ......+.+++|++.++.+++.+++.....+..+++|+++|| +||||+++++
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~---~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQ---GILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHH
Confidence 344555555444444433332222 223444678899999999999999998888889999999999 9999999999
Q ss_pred HHHHHHHHHHHHhhcchhH-HHHHHHHHHHHhhhhhhhHhHHHHhccCCCc--chhHHhHHHHHHHHHHHHHHHhhccc-
Q 019729 122 AVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNM--RGSLGSVNQLSVTIGIMLAYLLGLFV- 197 (336)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~-~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~~- 197 (336)
.++++++.++++++++... ++++|+++|++.|...+...+++.|.+|+++ |+.+.+++..+.++|..++|.+++.+
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~ 167 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIA 167 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998876444 5578999999999999999999999998874 47788888888888888887777554
Q ss_pred ---hhHHHHHHhHHHHHHHHHHhhcc
Q 019729 198 ---NWRVLAVLGVLPCTLLIPGLFFI 220 (336)
Q Consensus 198 ---~w~~~~~~~~~~~~~~~~~~~~~ 220 (336)
|||+.|++.++..++.++.+...
T Consensus 168 ~~~gw~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 168 DKFGYSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HhhChHHHHHHHHHHHHHHHHHHHHc
Confidence 99999998765444444433333
No 93
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.72 E-value=6.7e-18 Score=145.56 Aligned_cols=142 Identities=14% Similarity=0.207 Sum_probs=130.7
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHh
Q 019729 81 KLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVP 160 (336)
Q Consensus 81 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 160 (336)
+-+.++.|++.+...+.+++..++.|.+.||+|+|..+++|++.+..+.+++++.+++++++++|.++|+|.+...+...
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgl 181 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGL 181 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhH
Confidence 33456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCc-chhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhcccC
Q 019729 161 VYIAEIAPQNM-RGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFFIPE 222 (336)
Q Consensus 161 ~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e 222 (336)
+++++.+|.++ |++++|+.-.+.++|..+||++++.+ |.+.+|++.++++++-..+.+++-|
T Consensus 182 amlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 182 AMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred HHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 99999999765 79999999999999999999999877 9999999999998888776665433
No 94
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.72 E-value=9.4e-16 Score=140.68 Aligned_cols=152 Identities=17% Similarity=0.082 Sum_probs=100.8
Q ss_pred ccchhhHhH-hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHH---hhcch-----
Q 019729 68 YSSPTQAEI-ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIIS---FSKDS----- 138 (336)
Q Consensus 68 ~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~----- 138 (336)
...+..|.+ .+++|++..+.+++.++..++..+++++.|+++||+|||++++++..+.+++..... .++..
T Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (420)
T PRK09528 28 SWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNIL 107 (420)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555544 556999999999999999999999999999999999999999887666554432211 11111
Q ss_pred hHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc---hhHHHHHHhHHHHHHHHH
Q 019729 139 SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---NWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 139 ~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~ 215 (336)
...++.+++.|.+.....+....+..+ . .++++...+.......+|..++|.+++.+ +|++.|++.++..++.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~ 185 (420)
T PRK09528 108 LGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLV 185 (420)
T ss_pred HHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHH
Confidence 111222333333332333333333322 2 24567778888888888888888888766 899999988877776665
Q ss_pred Hhhccc
Q 019729 216 GLFFIP 221 (336)
Q Consensus 216 ~~~~~~ 221 (336)
..++++
T Consensus 186 ~~~~~~ 191 (420)
T PRK09528 186 LLFFAK 191 (420)
T ss_pred HHhccc
Confidence 555543
No 95
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.68 E-value=2.3e-15 Score=137.80 Aligned_cols=160 Identities=15% Similarity=0.246 Sum_probs=123.5
Q ss_pred cccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHh----hhchhHHHHHH-HHHHHHHHHHHHhhcchh
Q 019729 65 TCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAE----YIGRKGSLMIA-AVPNIIGWLIISFSKDSS 139 (336)
Q Consensus 65 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~l~~~-~~~~~~~~~~~~~~~~~~ 139 (336)
......+..+.+.+++|.+....+++..+..+...+.+++.|+++| |+||||+++++ .+..+++.++++++++..
T Consensus 19 ~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~ 98 (477)
T TIGR01301 19 GWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIG 98 (477)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhh
Confidence 3344455666678899999999999999999999999999999999 59999998875 566666667777765532
Q ss_pred -----------------HHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcc--hhHHhHHHHHHHHHHHHHHHhhccc---
Q 019729 140 -----------------FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMR--GSLGSVNQLSVTIGIMLAYLLGLFV--- 197 (336)
Q Consensus 140 -----------------~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~~--- 197 (336)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++|+.+++..
T Consensus 99 ~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~ 178 (477)
T TIGR01301 99 HLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLY 178 (477)
T ss_pred hhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 223333445557788888999999999998876 5789999999999999998887543
Q ss_pred ----------------hhHHHHHHhHHHHHHHHH-HhhcccCch
Q 019729 198 ----------------NWRVLAVLGVLPCTLLIP-GLFFIPESP 224 (336)
Q Consensus 198 ----------------~w~~~~~~~~~~~~~~~~-~~~~~~e~~ 224 (336)
+.+..|++.+++.++..+ ..+.++|.|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 179 KIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 456788888777766644 456688875
No 96
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.65 E-value=2.2e-14 Score=131.27 Aligned_cols=148 Identities=11% Similarity=0.025 Sum_probs=105.6
Q ss_pred chhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 019729 70 SPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGR-KGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLE 148 (336)
Q Consensus 70 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 148 (336)
.+..+.+.+++|++..+.|++.++..++..++++++|.++||+|| |+++.++.++.+++..+..+.++++.+++.|++.
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLAN 102 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 345556778899999999999999999999999999999999965 7788888888888888888889999999999999
Q ss_pred HHHhhhhhhhHhHHHH--------hccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHH
Q 019729 149 GFGVGVISYTVPVYIA--------EIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPG 216 (336)
Q Consensus 149 G~~~g~~~~~~~~~~~--------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 216 (336)
|++.+...+...++.. |......|.+..|. +|.+++|.+++.+ .|+ .|++.++..++..++
T Consensus 103 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~ 175 (418)
T TIGR00889 103 SLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT------IGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF 175 (418)
T ss_pred HHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh------HHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH
Confidence 9987666665554432 22222334444442 3444455554433 344 345555555555555
Q ss_pred hhcccCch
Q 019729 217 LFFIPESP 224 (336)
Q Consensus 217 ~~~~~e~~ 224 (336)
.+++||+|
T Consensus 176 ~~~~~e~~ 183 (418)
T TIGR00889 176 ALTLPDIP 183 (418)
T ss_pred HhcCCCCC
Confidence 66788875
No 97
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.65 E-value=3.4e-14 Score=129.08 Aligned_cols=237 Identities=10% Similarity=-0.047 Sum_probs=156.7
Q ss_pred HHHHhhhhhhccccccchhhHhHhhhccCCchhHHHH--HHHHHHHHHHHHHHH-HHHHhhhchhHHHHHHHHHH-HHHH
Q 019729 54 VVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIF--GSLANVGAMVGAIAS-GQIAEYIGRKGSLMIAAVPN-IIGW 129 (336)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~--~~~~~~~~~~~~~~~-g~l~dr~Grr~~l~~~~~~~-~~~~ 129 (336)
.+...++..|...+...|.+|.+.++.|.|.++.|.+ .++..+...+.+++. ++..||+||||..++...+. +++.
T Consensus 5 ~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~ 84 (390)
T TIGR02718 5 TLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACL 84 (390)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHH
Confidence 3444557777888888899999999999999999997 466688888888888 55799999999876655332 2222
Q ss_pred HHHH-h--hcc-hhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh----ccchhHH
Q 019729 130 LIIS-F--SKD-SSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG----LFVNWRV 201 (336)
Q Consensus 130 ~~~~-~--~~~-~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~----~~~~w~~ 201 (336)
...+ + ..+ ..+++...++.++......+....+..|..++++++...+....+..+|.++++... ...+||.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~ 164 (390)
T TIGR02718 85 ASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRP 164 (390)
T ss_pred HHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 2222 1 222 233444455566677777777888889999888888888888888888888888644 3459999
Q ss_pred HHHHhHHHHHHHHHHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccch
Q 019729 202 LAVLGVLPCTLLIPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYW 281 (336)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (336)
.|++.+++.++..+..++++|+++. +.+. ++......++.+|++..
T Consensus 165 ~f~~~a~l~~~~~~~~~~~~~~~~~---~~~~-------------------------------~~~~~~~~~~~l~~~~~ 210 (390)
T TIGR02718 165 AFLLVACVPLASLVCVLWLKDRAVA---SPEA-------------------------------PLARRASLFRFFRRPLA 210 (390)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcC---cccc-------------------------------chhhHHHHHHHHcCcCH
Confidence 9999888777665555555433210 0000 00011235566777665
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCCCcchhHHHHHHH
Q 019729 282 FPLMIGIGLLVLQQLSGINGVLFYSSNIFANAGKINISLDVILPIVE 328 (336)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 328 (336)
+..+....+... +......+.+.++++.|+++.+.+.+.....
T Consensus 211 ~~~~~~~~l~~~----~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~ 253 (390)
T TIGR02718 211 WSLLALALLSAM----TAVSGFGLSKLYLVDAGWPLEWIGRLGMAGG 253 (390)
T ss_pred HHHHHHHHHHHH----HHHHHHHHhhHHHHhcCCCHHHHHHHHhHHH
Confidence 544443333222 2334555677888888999998888765443
No 98
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.65 E-value=7.5e-15 Score=141.22 Aligned_cols=137 Identities=16% Similarity=0.081 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhcc
Q 019729 88 SIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIA 167 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~ 167 (336)
.+...+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++.+++.|++.++.++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34466777899999999999999999999999999999999999999888888888899999988889999999999999
Q ss_pred CCCcchhHHhHHHHHHHHHHHHHHHhhccc---hhHHHHHHhHHHHHHHHHHhhcccCch
Q 019729 168 PQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---NWRVLAVLGVLPCTLLIPGLFFIPESP 224 (336)
Q Consensus 168 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~~~~~~~e~~ 224 (336)
|++.|++++|+.+....+|.+++|.+++.+ +...++++.+++.+++.++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999998755 345677777777777777777789874
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.63 E-value=1.5e-14 Score=135.11 Aligned_cols=141 Identities=16% Similarity=0.276 Sum_probs=117.2
Q ss_pred HhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-hchhHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHHH
Q 019729 74 AEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEY-IGRKGSLMIAAVPNIIGWLIISFSK-DSSFLFMGRLLEGFG 151 (336)
Q Consensus 74 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~ 151 (336)
..+.+++|++.++.+++.+.+........+++|+++|| +|||++++++.++.+++.+++++++ +.+.+++.|++.|++
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig 125 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVG 125 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 34568899999998888888776666667899999999 5999999999999999999888874 456677889999999
Q ss_pred hhhhhhhHhHHHHhccCCCc--chhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHH
Q 019729 152 VGVISYTVPVYIAEIAPQNM--RGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLI 214 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~ 214 (336)
.|...+...+++.|++|+++ |..+.++++.+.++|..++|.+++.+ |||+.|++.++..++++
T Consensus 126 ~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 126 NGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred hhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 99999999999999998654 44577888899999999999888765 89999998776555443
No 100
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.63 E-value=3.7e-14 Score=128.95 Aligned_cols=146 Identities=18% Similarity=0.235 Sum_probs=121.0
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVI 155 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 155 (336)
+++++|.+..+.+++.++..++..++.++.|+++||+|||+.+..+.+...+........++++.+++.+++.+++.|..
T Consensus 243 l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~ 322 (393)
T PRK15011 243 IINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGIL 322 (393)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 55678999989998888888888899999999999999999888777666665555555677777888899988888888
Q ss_pred hhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhcccC
Q 019729 156 SYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFFIPE 222 (336)
Q Consensus 156 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e 222 (336)
.+....+..|.+|+ +|+++.++++....+|..+++.+++.+ +|+..+++.+++.++.++..+++||
T Consensus 323 ~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 323 GGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 88888888999985 599999998888888888888888665 8999999888888887777777665
No 101
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.62 E-value=5.5e-15 Score=113.67 Aligned_cols=132 Identities=23% Similarity=0.373 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCC
Q 019729 91 GSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQN 170 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~ 170 (336)
.+...++..++.++.|++.||+|||+.+..+..+..++.+.....++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567788999999999999999999999999999999988888899999999999999999999999999999999999
Q ss_pred cchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHh-hcccC
Q 019729 171 MRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGL-FFIPE 222 (336)
Q Consensus 171 ~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~-~~~~e 222 (336)
+|++..+..+....+|..+++.+.+.+ +|++.+++.++..++..+.. ++.||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999998888655 79998888877766665443 34454
No 102
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.62 E-value=2.6e-14 Score=131.45 Aligned_cols=141 Identities=18% Similarity=0.208 Sum_probs=115.2
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-chhHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHHHhh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI-GRKGSLMIAAVPNIIGWLIISFSK-DSSFLFMGRLLEGFGVG 153 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~g 153 (336)
+.+++|+++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++++..+ +...+.+...+.+++.|
T Consensus 36 L~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G 115 (493)
T PRK15462 36 LTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYG 115 (493)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcc
Confidence 4667899999999999999999999999999999999 999999999999999887776543 22334444455556677
Q ss_pred hhhhhHhHHHHhccCCC--cchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHH
Q 019729 154 VISYTVPVYIAEIAPQN--MRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPG 216 (336)
Q Consensus 154 ~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 216 (336)
...+...++++|.+|++ +|..+.++.+.+.++|+.++|.+.+.+ ||++.|.++++..+++++.
T Consensus 116 ~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 116 LFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred cccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHH
Confidence 77787889999999976 699999999999999999999998766 8999999876655544443
No 103
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.61 E-value=3e-14 Score=128.50 Aligned_cols=169 Identities=20% Similarity=0.236 Sum_probs=130.8
Q ss_pred HHhhhhhhccccccchhhHhHhhh--ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHHHHHH
Q 019729 56 ALGPIQFGFTCGYSSPTQAEIISD--LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGR-KGSLMIAAVPNIIGWLII 132 (336)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~ 132 (336)
.+..+..+...+.+.+..-.+.++ .+.+.+-.|++.++..++.+++++++|+.+.|.+. |+.++++.++..+++++.
T Consensus 40 ~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY 119 (488)
T KOG2325|consen 40 LLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLY 119 (488)
T ss_pred HHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHH
Confidence 333444445555555544334445 66677778999999999999999999999999996 889999999999999988
Q ss_pred -Hhh---c-chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----------
Q 019729 133 -SFS---K-DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---------- 197 (336)
Q Consensus 133 -~~~---~-~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---------- 197 (336)
++. + ..+.++++|++.|+|. +..++.-+|+++....++|.++++....+..+|.++||.++..+
T Consensus 120 ~~l~~~~~~~~y~mL~~R~l~Gvg~-~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i 198 (488)
T KOG2325|consen 120 LALAYVPNGVKYLMLVARILTGVGV-GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMI 198 (488)
T ss_pred HHHHhcccchHHHHHHHHHHcCcCc-ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEE
Confidence 332 3 5678999999999997 56778889999999999999999999998888888888887433
Q ss_pred -------hhHHHHHHhHHHHHHHHH-HhhcccCchh
Q 019729 198 -------NWRVLAVLGVLPCTLLIP-GLFFIPESPR 225 (336)
Q Consensus 198 -------~w~~~~~~~~~~~~~~~~-~~~~~~e~~~ 225 (336)
-+..+-|+.++..++..+ +.+++.|.++
T Consensus 199 ~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 199 LPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred cCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 134667777777777655 4456777654
No 104
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.61 E-value=1.4e-13 Score=128.26 Aligned_cols=170 Identities=15% Similarity=0.200 Sum_probs=131.1
Q ss_pred CChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHH
Q 019729 44 GSVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAV 123 (336)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 123 (336)
..+..|..-.+..++..+. ....+.+..+..-|+...+++..+..+-..+.++++|.++||++||++++.+.+
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~-------~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~ 83 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQ-------TVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQL 83 (524)
T ss_pred hHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHH
Confidence 3344454444444443332 233444555666788889999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhh-----cchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-
Q 019729 124 PNIIGWLIISFS-----KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV- 197 (336)
Q Consensus 124 ~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~- 197 (336)
+.++..+..++. .+.+.+++.-++.|++.+...|...+++.|..|+++...++++.+...+++.++||.+++.+
T Consensus 84 ~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv 163 (524)
T PF05977_consen 84 LRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILV 163 (524)
T ss_pred HHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 776655444332 36788889999999999999999999999999999999999999999999999999988765
Q ss_pred ---hhHHHHHHhHHHHHHHHHHhhcc
Q 019729 198 ---NWRVLAVLGVLPCTLLIPGLFFI 220 (336)
Q Consensus 198 ---~w~~~~~~~~~~~~~~~~~~~~~ 220 (336)
|-.+.|++.++..++.++.....
T Consensus 164 a~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 164 AFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 66778887766655554444433
No 105
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.60 E-value=2e-14 Score=131.82 Aligned_cols=146 Identities=15% Similarity=0.089 Sum_probs=121.7
Q ss_pred hccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhh
Q 019729 79 DLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYT 158 (336)
Q Consensus 79 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 158 (336)
+.+.+..+.+++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 34666677899999999999999999999999999999999999999988888888889988888999999998888888
Q ss_pred HhHHHHhccCCCcchhHHhH-HHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHH-hhcccCch
Q 019729 159 VPVYIAEIAPQNMRGSLGSV-NQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPG-LFFIPESP 224 (336)
Q Consensus 159 ~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~-~~~~~e~~ 224 (336)
...++.|.+|++.|++..+. ++....+|.++++.+.+.+ ||+..|++.+++.++..+. .+.+++.+
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 88999999999999987765 6777888888888887665 8999999877776665443 33444443
No 106
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.58 E-value=8.4e-14 Score=125.31 Aligned_cols=143 Identities=12% Similarity=0.041 Sum_probs=121.1
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS--SFLFMGRLLEG 149 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G 149 (336)
..+.+.+++|.+..+.+++.++..++..++.++.|+++||+|||+.+.++.++.+++.++..+.++. ..+++..++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 306 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVF 306 (377)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHH
Confidence 3445667789888889999999999999999999999999999999999998888888877776643 33445678888
Q ss_pred HHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHH
Q 019729 150 FGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLI 214 (336)
Q Consensus 150 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~ 214 (336)
++.+...+..+.++.|.+|+++|++..|+.+....+|..++|.+.+.+ ||++.|++.+++.++++
T Consensus 307 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 307 FTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 888888888889999999999999999999999999999999887654 89999988877766543
No 107
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.57 E-value=1.8e-13 Score=125.01 Aligned_cols=150 Identities=10% Similarity=0.072 Sum_probs=125.4
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFG 151 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 151 (336)
..|.+.++.|.+..+.+.+.+...++..++.++.|+++||+|||+.+..+.+..+++.++..+.++.+.+.+..++.|++
T Consensus 242 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (406)
T PRK11551 242 WLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF 321 (406)
T ss_pred HHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 45667777899999999999999999999999999999999999999887777777777777777777777788888998
Q ss_pred hhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHHHHHHhhccc
Q 019729 152 VGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLFFIP 221 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~~~~ 221 (336)
.+...+...+++.|.+|+++|++..|+.+....+|.+++|.+++.+ +|...++..+.+.++..+..+++.
T Consensus 322 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 322 VVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888999999999999999999999999999999999998776 456666666666655555544443
No 108
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.56 E-value=5.8e-14 Score=129.44 Aligned_cols=153 Identities=17% Similarity=0.178 Sum_probs=117.2
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----hchhH-HHHHHHHHHHHHHHHHHhhcc------hhH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEY----IGRKG-SLMIAAVPNIIGWLIISFSKD------SSF 140 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~ 140 (336)
..+.+.+++|+++.+.|++.++..+...+..|+.|+++|| +|||| .++++....+++.+++...++ ...
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 3445777899999999999999999999999999999998 68744 566777888888877776654 345
Q ss_pred HHHHHHHHHHHhhhhhhhHhHHHHhcc-CCCcchhHHhHHHHHHHHHHHHHHHhh----c-------cchhHHHHHHhHH
Q 019729 141 LFMGRLLEGFGVGVISYTVPVYIAEIA-PQNMRGSLGSVNQLSVTIGIMLAYLLG----L-------FVNWRVLAVLGVL 208 (336)
Q Consensus 141 ~~~~r~l~G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~----~-------~~~w~~~~~~~~~ 208 (336)
+++.+++.+++.+.......++..|.. ++++|++..++.+.+..+|..+++.+. . ..+||+.+++.++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~ 181 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLAL 181 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHH
Confidence 666788888888877777888889987 468899999988877777765543332 1 2379999888887
Q ss_pred HHHHHHH-HhhcccCch
Q 019729 209 PCTLLIP-GLFFIPESP 224 (336)
Q Consensus 209 ~~~~~~~-~~~~~~e~~ 224 (336)
+.++..+ ..++++|++
T Consensus 182 l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 182 IGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHcCCEecC
Confidence 7766644 445567653
No 109
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.56 E-value=2.1e-13 Score=124.89 Aligned_cols=152 Identities=14% Similarity=0.263 Sum_probs=122.7
Q ss_pred hHhHhhhccCCc--------hhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc----chhH
Q 019729 73 QAEIISDLKLTI--------SEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK----DSSF 140 (336)
Q Consensus 73 ~~~~~~~~g~s~--------~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~ 140 (336)
.+.+.++.|.++ +..+.+.++..++..++.++.|+++||+|+|+++.++.++.+++..+..... +.+.
T Consensus 231 ~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~ 310 (418)
T TIGR00889 231 GNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYAL 310 (418)
T ss_pred HHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHH
Confidence 344555555443 5678999999999999999999999999999999999999988877666632 2356
Q ss_pred HHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHH-HHHHHHHHHHHHhhccc----------hhHHHHHHhHHH
Q 019729 141 LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQ-LSVTIGIMLAYLLGLFV----------NWRVLAVLGVLP 209 (336)
Q Consensus 141 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~----------~w~~~~~~~~~~ 209 (336)
+++.+++.|++.+...+....++.|++|+++|+++.|+.+ ....+|.++||.+++.+ ||+..|.+.+++
T Consensus 311 l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~ 390 (418)
T TIGR00889 311 LFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGY 390 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHH
Confidence 6778999999999888999999999999999999999997 67788999998888654 489999888777
Q ss_pred HHHHHH-HhhcccCch
Q 019729 210 CTLLIP-GLFFIPESP 224 (336)
Q Consensus 210 ~~~~~~-~~~~~~e~~ 224 (336)
.++..+ ..++++|+.
T Consensus 391 ~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 391 IAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHHhCCcc
Confidence 666644 455667763
No 110
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.54 E-value=3e-13 Score=120.38 Aligned_cols=153 Identities=22% Similarity=0.343 Sum_probs=135.3
Q ss_pred ccchhhHhHhhh-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhH-HHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 019729 68 YSSPTQAEIISD-LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKG-SLMIAAVPNIIGWLIISFSKDSSFLFMGR 145 (336)
Q Consensus 68 ~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~r 145 (336)
......|.+.++ +|.+..+.+++.+...++..++.++.+++.||+|||+ .+..+..+..++.+.....++.+.+.+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 272 (352)
T cd06174 193 GLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVAL 272 (352)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 334455555555 4899999999999999999999999999999999999 99999999999999999988888899999
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhcc
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFFI 220 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 220 (336)
++.|++.+...+....++.|..|+++|++..++.+....+|..+++.+.+.+ +|+..+++.+++.++..+..+++
T Consensus 273 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 273 LLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred HHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHheec
Confidence 9999999999999999999999999999999999999999999999988655 89999999888888776655443
No 111
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.54 E-value=6.7e-13 Score=119.72 Aligned_cols=146 Identities=15% Similarity=0.226 Sum_probs=121.5
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVI 155 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 155 (336)
+.+++|.++.+.+++.+...+...++.++.|++.||+|||+.+.++.++..+..+...+.++.+.+++.+++.|++.+..
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 305 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGIL 305 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45778999999998888887788889999999999999999998887776666666666677777888899999999888
Q ss_pred hhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhcccC
Q 019729 156 SYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFFIPE 222 (336)
Q Consensus 156 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e 222 (336)
.+....++.|..|+ +|+.+.++++....+|..++|.+++.+ +|+..+++.+++.+++.+...+++|
T Consensus 306 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 306 AGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 88888999999875 567999999988889999998888654 7999999988888877776665543
No 112
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.53 E-value=1.7e-12 Score=114.36 Aligned_cols=154 Identities=16% Similarity=0.089 Sum_probs=130.0
Q ss_pred CCChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 019729 43 DGSVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAA 122 (336)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 122 (336)
+-.+++|.++++.++..+..++....+++........|| +.+..-|++.++.+.+....+++-|+.||+|-|..++++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 345678999999999999998888888888877888888 7778889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhc------chh--HHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh
Q 019729 123 VPNIIGWLIISFSK------DSS--FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 123 ~~~~~~~~~~~~~~------~~~--~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
.+.+++..+-..+. .++ ....+..+.+.++-........+..-|||+++|..+..+-.++..+|.+++..+.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 99999998877653 233 5567788888887666666677888899999999999998888888888887776
Q ss_pred ccc
Q 019729 195 LFV 197 (336)
Q Consensus 195 ~~~ 197 (336)
..+
T Consensus 197 pil 199 (480)
T KOG2563|consen 197 PIL 199 (480)
T ss_pred cee
Confidence 444
No 113
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.52 E-value=7.7e-13 Score=120.55 Aligned_cols=150 Identities=13% Similarity=0.188 Sum_probs=122.9
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFG 151 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 151 (336)
..+.+..+.|.+ +.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++.|++
T Consensus 238 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 315 (399)
T PRK05122 238 FITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFG 315 (399)
T ss_pred HHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 344444555653 456667788889999999999999999999999999888888888888888888888889999999
Q ss_pred hhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhcccCc
Q 019729 152 VGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFFIPES 223 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e~ 223 (336)
.+..++.....+.|.+|+++|+++.++++....+|..+++.+.+.+ ||++.+++.+++.+++++..++++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 316 FSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9988888888889999999999999999999988888877776554 89999998888777776665555443
No 114
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.51 E-value=6.5e-13 Score=123.54 Aligned_cols=149 Identities=13% Similarity=0.094 Sum_probs=109.0
Q ss_pred hhhHh-HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHH--HHHhhcchhHHHHHHHH
Q 019729 71 PTQAE-IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWL--IISFSKDSSFLFMGRLL 147 (336)
Q Consensus 71 ~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~r~l 147 (336)
...|. +++++|++..+.++..++..++..++.+++|+++||+|||+.+.....+..++.. .....++...+.+.+++
T Consensus 279 ~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (467)
T PRK09556 279 NWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFA 358 (467)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 34554 4577999999999999999999999999999999999999887665444433322 22234556566677888
Q ss_pred HHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHH-HHHHHHHhhcc----------------chhHHHHHHhHHHH
Q 019729 148 EGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTI-GIMLAYLLGLF----------------VNWRVLAVLGVLPC 210 (336)
Q Consensus 148 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~----------------~~w~~~~~~~~~~~ 210 (336)
.|++...........+.|.+|++.|+++.|+.+....+ |.+++|.+.+. .+|+..|++..++.
T Consensus 359 ~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~ 438 (467)
T PRK09556 359 LGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAA 438 (467)
T ss_pred HHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHH
Confidence 88655444444456777999999999999999888776 65666665532 25899998887777
Q ss_pred HHHHHHhhc
Q 019729 211 TLLIPGLFF 219 (336)
Q Consensus 211 ~~~~~~~~~ 219 (336)
+++.+..++
T Consensus 439 ~~~~~~~~~ 447 (467)
T PRK09556 439 IGCICLMAI 447 (467)
T ss_pred HHHHHHHHH
Confidence 776555443
No 115
>PRK09952 shikimate transporter; Provisional
Probab=99.51 E-value=9.3e-13 Score=121.45 Aligned_cols=148 Identities=14% Similarity=0.177 Sum_probs=111.3
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh---hc-chhHHHHHHHHHHHH
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF---SK-DSSFLFMGRLLEGFG 151 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~-~~~~~~~~r~l~G~~ 151 (336)
+.+++|.+......+..+..+...++.++.|+++||+|||++++.+.++.+++.+.+.. .. +...+++..++.|++
T Consensus 277 ~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 356 (438)
T PRK09952 277 STQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIA 356 (438)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 45678888776666666667777889999999999999999988887766555433322 22 334444556777888
Q ss_pred hhhhhhhHhHHHHhccCCCcchhHHhHH-HHHHHHHHHHHHHhhccc------hhHHHHHHhHHHHHHHHHHhhcccCc
Q 019729 152 VGVISYTVPVYIAEIAPQNMRGSLGSVN-QLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPES 223 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~~~~~~~~~~~~e~ 223 (336)
.+...+..+++++|.+|++.|+.+.++. +.+..+|+.++|.+.+.+ +|+..+.+.++++++..+..+.++|+
T Consensus 357 ~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 357 HDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 8888888999999999999999999984 455568888888887654 48888888888888777766666764
No 116
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.49 E-value=7.1e-12 Score=113.38 Aligned_cols=226 Identities=17% Similarity=0.203 Sum_probs=148.9
Q ss_pred ccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc-hhHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 019729 64 FTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIG-RKGSLMIAAVPNIIGWLIISFSKDSSFLF 142 (336)
Q Consensus 64 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 142 (336)
+..+...|.++.+.++.|+|..+.|.+.++..+...++++++|.++||++ +|+.+.++.++.++..+.....++++.++
T Consensus 16 ~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~ 95 (400)
T PF03825_consen 16 FAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLF 95 (400)
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34455667888899999999999999999999999999999999999986 68888888888887777777888888888
Q ss_pred HHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHH-----Hhhccchh---HHHHHHhHHHHHHHH
Q 019729 143 MGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAY-----LLGLFVNW---RVLAVLGVLPCTLLI 214 (336)
Q Consensus 143 ~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~-----~~~~~~~w---~~~~~~~~~~~~~~~ 214 (336)
+.-++..+......|...++..+... +++.-.|-.-.++++|-+++. .+.+..++ ...+++.+...++..
T Consensus 96 ~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~ 173 (400)
T PF03825_consen 96 VIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLA 173 (400)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHH
Confidence 88888888888888888888888875 344444444444444444442 22233222 245556555555555
Q ss_pred HHhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHH
Q 019729 215 PGLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQ 294 (336)
Q Consensus 215 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (336)
...+.+|++|.. +. . .++.++....+..+++|+|.....++...+..
T Consensus 174 ~~~l~lp~~~~~---~~-~---------------------------~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~-- 220 (400)
T PF03825_consen 174 GFALFLPKTPPK---RS-A---------------------------KESVKKLLGLDALKLLKNPRFLVFLLAAFLIG-- 220 (400)
T ss_pred HHHHhCCCCccc---cc-c---------------------------CCCcccccchHHHHHhcCccHHHHHHHHHHHH--
Confidence 555667877620 00 0 00001111223346777766544433332222
Q ss_pred HhhchHHHHHhHHHHHHhcC-CCCcchhHHHHH
Q 019729 295 QLSGINGVLFYSSNIFANAG-KINISLDVILPI 326 (336)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~~~ 326 (336)
........|.+.++++.| .+....+.+.++
T Consensus 221 --~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l 251 (400)
T PF03825_consen 221 --ISHAAYYTFFSIYLQELGGYSGSTIGILWAL 251 (400)
T ss_pred --HHHHHHHHHHHHHHHHcccchhhHHHHHHHH
Confidence 234567778899999997 666666655443
No 117
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.49 E-value=1e-12 Score=118.93 Aligned_cols=146 Identities=16% Similarity=0.175 Sum_probs=104.1
Q ss_pred hhhHh-HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhH--HHH------HHHHHHHHHHHHHHhhcchhHH
Q 019729 71 PTQAE-IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKG--SLM------IAAVPNIIGWLIISFSKDSSFL 141 (336)
Q Consensus 71 ~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~--~l~------~~~~~~~~~~~~~~~~~~~~~~ 141 (336)
...|. +.+++|.+..+.+++.++..++..++.++.|+++||+|||+ ... .+.++..+..+.....++.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (399)
T TIGR00893 236 TWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAA 315 (399)
T ss_pred HHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHH
Confidence 34444 45668999999999999999999999999999999999996 111 1111111111111112233333
Q ss_pred HHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----h-hHHHHHHhHHHHHHHHHH
Q 019729 142 FMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----N-WRVLAVLGVLPCTLLIPG 216 (336)
Q Consensus 142 ~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~-w~~~~~~~~~~~~~~~~~ 216 (336)
+....+.+++.+ ..+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+ + |+..+++.+++.++..+.
T Consensus 316 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 316 LALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALS 394 (399)
T ss_pred HHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHH
Confidence 333444444444 7888999999999999999999999999999999999888765 5 898888887777666544
Q ss_pred h
Q 019729 217 L 217 (336)
Q Consensus 217 ~ 217 (336)
.
T Consensus 395 ~ 395 (399)
T TIGR00893 395 Y 395 (399)
T ss_pred H
Confidence 3
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.49 E-value=2.7e-15 Score=140.04 Aligned_cols=262 Identities=16% Similarity=0.168 Sum_probs=3.0
Q ss_pred hhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh----
Q 019729 60 IQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---- 135 (336)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---- 135 (336)
+......++....++.+++.|+++.++.|++.+.+-++.++..++..++.+|..|-|.+-+|.++.+++++++++=
T Consensus 13 ~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~ 92 (539)
T PF03137_consen 13 LFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhc
Confidence 3336677777888899999999999999999999999999999999999999989899999999999999887651
Q ss_pred --------c--------------------------------------chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCC
Q 019729 136 --------K--------------------------------------DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQ 169 (336)
Q Consensus 136 --------~--------------------------------------~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~ 169 (336)
. -+..++++.++.|+|....++...+|+-|..++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~ 172 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK 172 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence 0 024677789999999999999999999999999
Q ss_pred CcchhHHhHHHHHHHHHHHHHHHhhccc--------------------------hhHHHHHHhHHHHHHHHHHhhcccCc
Q 019729 170 NMRGSLGSVNQLSVTIGIMLAYLLGLFV--------------------------NWRVLAVLGVLPCTLLIPGLFFIPES 223 (336)
Q Consensus 170 ~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------------------------~w~~~~~~~~~~~~~~~~~~~~~~e~ 223 (336)
++-+..+|+......+|.++|..+++.. .|..-|++.+++.++..+.++++|+.
T Consensus 173 ~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 173 KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999998888533 15555666666666666666666654
Q ss_pred hhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHH--hhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhchHH
Q 019729 224 PRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRS--VASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSGING 301 (336)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (336)
-+. ..+.++.++ .++.+.++ ...++.++.+.. ..+..++-....+++++| ++++...+....+.....+
T Consensus 253 lp~---~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~N----p~f~~~~la~~~~~~~~~G 323 (539)
T PF03137_consen 253 LPG---TSERQEEKE-SSERKEED-SDKDSFKDPKSKKSFGKSIKDFPKALKRLLTN----PVFMCLILAGVFESFIVSG 323 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCC---cccccchhh-hhhcchhh-hhhhcccccccccchhhhhhhHHHHHHHHhcC----hHHHHHHHHHHHHHHHHHH
Confidence 221 100000000 00000000 000000000000 000111122334444444 5556666666666667788
Q ss_pred HHHhHHHHHHhc-CCCCcchhHHHHHHHHh
Q 019729 302 VLFYSSNIFANA-GKINISLDVILPIVEAL 330 (336)
Q Consensus 302 ~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~ 330 (336)
+..|.|.|++.. ++++..++.+.++..+.
T Consensus 324 ~~tF~pKylE~QF~~sas~A~~l~G~v~ip 353 (539)
T PF03137_consen 324 FATFLPKYLESQFGLSASQASLLTGIVSIP 353 (539)
T ss_dssp ------------------------------
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhhhhcc
Confidence 999999998755 99999998888765553
No 119
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.48 E-value=7.7e-13 Score=119.79 Aligned_cols=141 Identities=17% Similarity=0.171 Sum_probs=108.4
Q ss_pred hhhHhHh-hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHH--HHHHh--hcchhHHHHHH
Q 019729 71 PTQAEII-SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGW--LIISF--SKDSSFLFMGR 145 (336)
Q Consensus 71 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~~~~~r 145 (336)
...|.+. +++|.+..+.+.+.+...++..++.++.|+++||+|||+.+..+..+..+.. +...+ .++.+.+++..
T Consensus 240 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (394)
T TIGR00883 240 TYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLV 319 (394)
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 3445554 6789999999999999999999999999999999999998776554444332 22222 24566667778
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhH-HHHHHHHHHHHHHHhhccc----h-hHHHHHHhHHHHH
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSV-NQLSVTIGIMLAYLLGLFV----N-WRVLAVLGVLPCT 211 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~----~-w~~~~~~~~~~~~ 211 (336)
++.|++.+...+...+++.|.+|+++|+++.++ .+.+..+|..++|.+++.+ + |+..++......+
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 320 LGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 889999889999999999999999999999997 4566677888888887655 5 7777666555443
No 120
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.48 E-value=5.8e-13 Score=123.38 Aligned_cols=145 Identities=11% Similarity=0.028 Sum_probs=119.0
Q ss_pred hhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh--chhHHHHH--HHHHHHHHHHHHHhhcchhHHHHHHH
Q 019729 71 PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI--GRKGSLMI--AAVPNIIGWLIISFSKDSSFLFMGRL 146 (336)
Q Consensus 71 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~r~ 146 (336)
..++.+.++.|.+..+.+++.++..++..+++++.|+++||. ++|+...+ +.++.+++.+++...++++.+++.++
T Consensus 262 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~ 341 (455)
T TIGR00892 262 IFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCI 341 (455)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 345666677899999999999999999999999999999973 34443333 33444455556667788888888999
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHHHHH
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~ 215 (336)
+.|++.+...+...+++.|.+|++++++..++++....+|.+++|.+++.+ +|++.|++.++..++..+
T Consensus 342 ~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 342 FFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999765 588899888877665544
No 121
>PRK03699 putative transporter; Provisional
Probab=99.48 E-value=2.8e-12 Score=116.72 Aligned_cols=150 Identities=15% Similarity=0.074 Sum_probs=122.1
Q ss_pred hhHhHh-hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 019729 72 TQAEII-SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF 150 (336)
Q Consensus 72 ~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 150 (336)
..|.+. +++|++..+.+++.+.+.++..++.++.|+++||+|||+.+.....+.++..++....++.+.+.+..++.|+
T Consensus 227 ~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 306 (394)
T PRK03699 227 WVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGF 306 (394)
T ss_pred HHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 445454 6789999999999999999999999999999999999999988887777777776677777777777888999
Q ss_pred HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhcccC
Q 019729 151 GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFFIPE 222 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e 222 (336)
+.+..++...++..|..| ++++...+.......+|..++|.+.+.+ ||+..+++.+++.+++.+...++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 307 FSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 888888888888888776 4567888888888889999999888665 8888888877777766555555443
No 122
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.48 E-value=6.4e-12 Score=113.87 Aligned_cols=143 Identities=15% Similarity=0.120 Sum_probs=123.3
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFG 151 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 151 (336)
..|.+.++.|.+..+.+.+.++..++..++.++.+++.||+|+|+.+.++.++.++..+..++.++.+.+++.+++.|+.
T Consensus 227 ~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~ 306 (382)
T TIGR00902 227 FSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGT 306 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 44556577999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHhHHHHhccCCCcchhHHhHHH-HHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHH
Q 019729 152 VGVISYTVPVYIAEIAPQNMRGSLGSVNQ-LSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPG 216 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 216 (336)
.+..++....++.+. |+++|+++.++++ ...++|.++++.+++.+ ++ ..|++.+++++++++.
T Consensus 307 ~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 307 FAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 999999999999998 9999999999976 56778888888888766 54 4566666666655444
No 123
>PRK12382 putative transporter; Provisional
Probab=99.47 E-value=2.3e-12 Score=117.09 Aligned_cols=145 Identities=12% Similarity=0.123 Sum_probs=121.2
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFG 151 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 151 (336)
..+.+.++.+.+. .++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++.|++
T Consensus 238 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 315 (392)
T PRK12382 238 FVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAG 315 (392)
T ss_pred HHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 3444555566553 45666777888899999999999999999999999988888888888888888888889999999
Q ss_pred hhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhh
Q 019729 152 VGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLF 218 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 218 (336)
.+...+.....+.|.+|+++|+++.++++....+|..++|.+.+.+ ||+..|++.+++.++..+..+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 316 CSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 9888888888999999999999999999999999999998888665 899999998887777655443
No 124
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.46 E-value=1.8e-12 Score=121.01 Aligned_cols=154 Identities=15% Similarity=0.058 Sum_probs=112.5
Q ss_pred hhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc--c-hh-HHHHHHH
Q 019729 71 PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK--D-SS-FLFMGRL 146 (336)
Q Consensus 71 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~-~~-~~~~~r~ 146 (336)
...|.+.++.|.+.....+......++..++.++.++++||+|||+.++.+.++.+++.++++... + .. ....+.+
T Consensus 292 ~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~ 371 (479)
T PRK10077 292 YYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSML 371 (479)
T ss_pred HHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 345777788898877777777788888999999999999999999999999999888877765431 2 11 2223344
Q ss_pred HHHHHhhh-hhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhc----------cchhHHHHHHhHHHHHHHHH
Q 019729 147 LEGFGVGV-ISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL----------FVNWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 147 l~G~~~g~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~----------~~~w~~~~~~~~~~~~~~~~ 215 (336)
+.+++.+. ..+....+++|.+|+++|+++.|+.+....+|.++++.+.. ..+|++.|++.++.+++..+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (479)
T PRK10077 372 FYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAAL 451 (479)
T ss_pred HHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHH
Confidence 44444443 33667899999999999999999998888888877744332 23677778777766665544
Q ss_pred H-hhcccCch
Q 019729 216 G-LFFIPESP 224 (336)
Q Consensus 216 ~-~~~~~e~~ 224 (336)
+ +++.||++
T Consensus 452 ~~~~~~~e~~ 461 (479)
T PRK10077 452 FMWKFVPETK 461 (479)
T ss_pred HHHhccccCC
Confidence 4 44567764
No 125
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.46 E-value=4.2e-13 Score=126.01 Aligned_cols=266 Identities=16% Similarity=0.201 Sum_probs=193.5
Q ss_pred HHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHH
Q 019729 51 CVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWL 130 (336)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 130 (336)
.+.+.++..+..++..+++...+..+.+.++++.++.|++.+.+-++..+...+..++.-|..|-+.+-+|.++++++++
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsl 177 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSL 177 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHH
Confidence 33444555566666668888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh--------------------c---------------------------c----hh-HHHHHHHHHHHHhhhhhhh
Q 019729 131 IISFS--------------------K---------------------------D----SS-FLFMGRLLEGFGVGVISYT 158 (336)
Q Consensus 131 ~~~~~--------------------~---------------------------~----~~-~~~~~r~l~G~~~g~~~~~ 158 (336)
++++- + . ++ .++++.++.|+|....++.
T Consensus 178 l~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl 257 (735)
T KOG3626|consen 178 LFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL 257 (735)
T ss_pred HHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC
Confidence 88761 0 0 22 5666789999999999999
Q ss_pred HhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----------------------hhHHHHHHhHHHHHHHHH
Q 019729 159 VPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----------------------NWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 159 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----------------------~w~~~~~~~~~~~~~~~~ 215 (336)
..+|+-|...+++-...+|+......+|.++|.+++++. .|+.-|++++.+.++..+
T Consensus 258 GisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~ 337 (735)
T KOG3626|consen 258 GISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAV 337 (735)
T ss_pred CCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888543 277778888888888888
Q ss_pred HhhcccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhh--hhchhhhhhHHHHhcccchHHHHHHHHHHHH
Q 019729 216 GLFFIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVA--SSSRRTAIRFAELKRKRYWFPLMIGIGLLVL 293 (336)
Q Consensus 216 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (336)
.++++|...+.- .+. ...+..+..+.+++ ..+.+.. +.-++-+...+++++|+ +++..++...
T Consensus 338 p~f~fPk~lp~~---~~~-~~~~~~~~~k~~~~-------~~~~~~~~~~~ikdfp~s~~~ll~N~----if~~~~l~~~ 402 (735)
T KOG3626|consen 338 PLFFFPKELPKS---QKR-KRARDLHVLKTESG-------GAKSDKTFGKKIKDFPKSIKRLLSNP----IFMLVVLASV 402 (735)
T ss_pred HHHhCcccCccc---ccc-chhhhhcccccccc-------cccCCcchhhhHHHHHHHHHHHhcCc----hHHHHHHHHH
Confidence 888888654311 000 00000000000000 0000000 01112234555666654 4555566666
Q ss_pred HHhhchHHHHHhHHHHHHhc-CCCCcchhHHHHHHHHhh
Q 019729 294 QQLSGINGVLFYSSNIFANA-GKINISLDVILPIVEALN 331 (336)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~g 331 (336)
.+...+.+...|+|-|++.. |.++..+..+++..++.+
T Consensus 403 ~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~ 441 (735)
T KOG3626|consen 403 IESLAITGYITFLPKYLETQFGISASLANILTGSIGVPA 441 (735)
T ss_pred HHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhh
Confidence 67777888999999999655 999999999887666543
No 126
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.46 E-value=2.6e-12 Score=117.33 Aligned_cols=132 Identities=20% Similarity=0.226 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhc
Q 019729 87 FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEI 166 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~ 166 (336)
.+.+.++..++..++.++.|+++||+|||+.+..+..+.+++.+...+.++.+.+++.+++.|++.+...+...+++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45666777788889999999999999999999999888888877777778888888899999999999999999999999
Q ss_pred cCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhh
Q 019729 167 APQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLF 218 (336)
Q Consensus 167 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 218 (336)
.|+++|++..++.+....+|..+||.+++.+ +|+..|++.+++.++..+..+
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988765 899999998888777665544
No 127
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.45 E-value=6.1e-12 Score=116.03 Aligned_cols=170 Identities=18% Similarity=0.176 Sum_probs=138.6
Q ss_pred HHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchh--HHHHHHHHHHHHHHH
Q 019729 53 LVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRK--GSLMIAAVPNIIGWL 130 (336)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~ 130 (336)
+++....+.++++. ..........+++|++..+...+..+..+.+.+|++++|++.||+|.| ++++++++++.+..+
T Consensus 286 fLia~~l~~dg~~t-i~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~ 364 (477)
T PF11700_consen 286 FLIAYFLYSDGVNT-IISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPL 364 (477)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 33333334454432 223333334568999999999999999999999999999999999999 898888888866555
Q ss_pred HHHh--------hcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----
Q 019729 131 IISF--------SKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----- 197 (336)
Q Consensus 131 ~~~~--------~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----- 197 (336)
...+ .++.+.+.+.-++.|+..|..++...++.+|+.|+++.+...|++....-..+++||.+.+.+
T Consensus 365 ~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg 444 (477)
T PF11700_consen 365 YGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG 444 (477)
T ss_pred HHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5555 567788999999999999999999999999999999999999999999999999999998776
Q ss_pred hhHHHHHHhHHHHHHHHHHhhcccCc
Q 019729 198 NWRVLAVLGVLPCTLLIPGLFFIPES 223 (336)
Q Consensus 198 ~w~~~~~~~~~~~~~~~~~~~~~~e~ 223 (336)
+-|+.++...++.+++++++++++..
T Consensus 445 ~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 445 SQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred CchhHHHHHHHHHHHHHHHHhhccch
Confidence 47788888888888888777777653
No 128
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.44 E-value=3.3e-12 Score=118.65 Aligned_cols=157 Identities=13% Similarity=0.052 Sum_probs=118.6
Q ss_pred ccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh-----hc------
Q 019729 68 YSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF-----SK------ 136 (336)
Q Consensus 68 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~------ 136 (336)
......|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+.++.+++.++.++ .+
T Consensus 302 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (481)
T TIGR00879 302 AIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSS 381 (481)
T ss_pred ehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccch
Confidence 3444567778889999988899999999999999999999999999999999988888777766652 11
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHH
Q 019729 137 DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTL 212 (336)
Q Consensus 137 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~ 212 (336)
+...+....++.+.......+....++.|.+|+++|+++.++.+....+|.+++|.+.+.+ +|++.|++.++++++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~ 461 (481)
T TIGR00879 382 GNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVL 461 (481)
T ss_pred hHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHH
Confidence 2222222333333333334466677889999999999999999999999999999887654 788888888877777
Q ss_pred HHHHh-hcccCch
Q 019729 213 LIPGL-FFIPESP 224 (336)
Q Consensus 213 ~~~~~-~~~~e~~ 224 (336)
..+.. ++.||++
T Consensus 462 ~~i~~~~~~~~~~ 474 (481)
T TIGR00879 462 GLIFVYFFLPETK 474 (481)
T ss_pred HHHHHheecccCC
Confidence 65554 4567653
No 129
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.44 E-value=4.1e-12 Score=116.49 Aligned_cols=153 Identities=12% Similarity=0.090 Sum_probs=125.2
Q ss_pred hhHhHhhh-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 019729 72 TQAEIISD-LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF 150 (336)
Q Consensus 72 ~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 150 (336)
..|.+.++ +|.+..+.+++.++..++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+..+++.++.|+
T Consensus 245 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 324 (417)
T PRK10489 245 LYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGY 324 (417)
T ss_pred hhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 44555555 89999999999999999999999999999999888888888888888888888888888777888899999
Q ss_pred HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHH-HHHHHHhhcccCch
Q 019729 151 GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPC-TLLIPGLFFIPESP 224 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~-~~~~~~~~~~~e~~ 224 (336)
+.+...+...+++.|..|++.|+++.++++....+|..+++.+.+.+ |++..+++.+.+. +++.+....+++.+
T Consensus 325 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 325 LSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 88888888889999999999999999999988888888888888666 6666666555444 44455556667654
No 130
>PRK03545 putative arabinose transporter; Provisional
Probab=99.42 E-value=2.6e-11 Score=110.23 Aligned_cols=143 Identities=14% Similarity=0.110 Sum_probs=111.5
Q ss_pred HhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHH-HHHHhhcchhHHHHHHHHHHHHh
Q 019729 74 AEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGW-LIISFSKDSSFLFMGRLLEGFGV 152 (336)
Q Consensus 74 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~r~l~G~~~ 152 (336)
+.+.+++|.+..+.+++.++..++..+++++.|+++||+|||+... +..+..++. ++....++.+.++++.++.|++.
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~ 308 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAI 308 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 4456668999999999999999999999999999999999887544 444444443 33345667777888888999988
Q ss_pred hhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhh
Q 019729 153 GVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLF 218 (336)
Q Consensus 153 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 218 (336)
+...+.....+.+..| ++|+++.++++....+|..+||.+++.+ |++..+++.+++.+++++...
T Consensus 309 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 309 MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSI 377 (390)
T ss_pred hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHH
Confidence 7777777788888876 6889999988887787777777777654 899999998888777655543
No 131
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.42 E-value=4e-12 Score=115.75 Aligned_cols=122 Identities=19% Similarity=0.300 Sum_probs=102.2
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHH-HHHhhcchhHHHHHHHHHHHHhhh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWL-IISFSKDSSFLFMGRLLEGFGVGV 154 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~r~l~G~~~g~ 154 (336)
+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++.++..+ .....++.+.+.+..++.|+..+.
T Consensus 265 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (405)
T TIGR00891 265 LKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQG 344 (405)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHcc
Confidence 4567899999999999999999999999999999999999999888776543333 333445566666666777877777
Q ss_pred hhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 155 ISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 155 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
..+..+.++.|.+|+++|+++.|+.+....+|..++|.+.+.+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l 387 (405)
T TIGR00891 345 IWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALL 387 (405)
T ss_pred chhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 7888889999999999999999999999999999999988776
No 132
>TIGR00895 2A0115 benzoate transport.
Probab=99.42 E-value=4.9e-12 Score=114.76 Aligned_cols=126 Identities=17% Similarity=0.220 Sum_probs=104.9
Q ss_pred hhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 019729 71 PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF 150 (336)
Q Consensus 71 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 150 (336)
...|.+.+++|.+..+.+++.++..++..++.++.|+++||+|||+.+....+......++....++...+++..++.|+
T Consensus 271 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (398)
T TIGR00895 271 NWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGF 350 (398)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 34567788899999999999999999999999999999999999955444443333333333335666777788899999
Q ss_pred HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc
Q 019729 151 GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF 196 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 196 (336)
+.+...+...+++.|.+|+++|+++.|+......+|..++|.+++.
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 351 FVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999998765
No 133
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.41 E-value=1.7e-11 Score=113.67 Aligned_cols=147 Identities=13% Similarity=0.133 Sum_probs=98.8
Q ss_pred hhHhHh-hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh--chhHHH-HHHHHHHHHHHHHHHh--hcchhHHHHHH
Q 019729 72 TQAEII-SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI--GRKGSL-MIAAVPNIIGWLIISF--SKDSSFLFMGR 145 (336)
Q Consensus 72 ~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~--~~~~~~~~~~r 145 (336)
..|.+. ++.|++..+.+++..++.++..++.++.|+++||+ |||+.. .+...+..++.+...+ ..+....+++.
T Consensus 275 ~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 354 (452)
T PRK11273 275 WSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACM 354 (452)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHH
Confidence 455554 45789988999999999999999999999999999 555432 2222333333332222 23444444445
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHH-HHHhhccc----hhHHHHHHhHHHHHHHHHHhh
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIML-AYLLGLFV----NWRVLAVLGVLPCTLLIPGLF 218 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 218 (336)
++.|.+..........++.|.+|++.|+++.|+.+....+|..+ +|.+.+.+ ||+..|++.++.++++++...
T Consensus 355 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 355 IVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 55555443333334456789999999999999998877777554 67766544 899999888877777655443
No 134
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.40 E-value=1.3e-11 Score=111.87 Aligned_cols=146 Identities=12% Similarity=0.111 Sum_probs=117.9
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFG 151 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 151 (336)
..|.+.++.|.+.++.+++.++..++..+++++.|++.||+|+|+++..+.++.+++.+... + ........++.|++
T Consensus 222 ~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~ 298 (381)
T PRK03633 222 LMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAA 298 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHH
Confidence 45667777899999999999999999999999999999999999999888888777665443 2 23344567778887
Q ss_pred hhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhcc
Q 019729 152 VGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFFI 220 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 220 (336)
.+...|...+++.|..|+++++...+.++....+|.+++|.+++.+ +|++.|++.+.+.++..+..+..
T Consensus 299 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 299 GFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 7778899999999999988888888888888899999999888766 78889988887777665555443
No 135
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.40 E-value=1.4e-11 Score=114.24 Aligned_cols=164 Identities=14% Similarity=0.078 Sum_probs=116.7
Q ss_pred hhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc-----hhHHHHHHHHHHH-HHHHHH
Q 019729 59 PIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIG-----RKGSLMIAAVPNI-IGWLII 132 (336)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~~~~~~~-~~~~~~ 132 (336)
++..|+.........+.+.+++|++.++.+.+.+...+...+-.+ +|.++||++ ||+.++++.++.+ ++....
T Consensus 35 y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l 113 (468)
T TIGR00788 35 LFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLL 113 (468)
T ss_pred HHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhc
Confidence 344555523334455667788999999999999999999988665 999999998 7777777776663 443333
Q ss_pred HhhcchhHHH-HHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHH---HHHHHHHHHHHHHhhcc----chhHHHHH
Q 019729 133 SFSKDSSFLF-MGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVN---QLSVTIGIMLAYLLGLF----VNWRVLAV 204 (336)
Q Consensus 133 ~~~~~~~~~~-~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~~g~~~~~~~~~~----~~w~~~~~ 204 (336)
+..++..... +..++.+++.+....+.-+++.|..+ +++....+.. .....+|.++++.+++. .+|+..|+
T Consensus 114 ~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~ 192 (468)
T TIGR00788 114 PGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFL 192 (468)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHH
Confidence 4334544444 47889999999999999999999998 5555443333 33334666666666654 48999999
Q ss_pred HhHHHHHHHHHHhhcccCch
Q 019729 205 LGVLPCTLLIPGLFFIPESP 224 (336)
Q Consensus 205 ~~~~~~~~~~~~~~~~~e~~ 224 (336)
+.+++.++..+..++++|++
T Consensus 193 ~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 193 ITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred HHHHHHHHHHHHHHhccccc
Confidence 98887777766667778853
No 136
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.40 E-value=2.7e-12 Score=120.35 Aligned_cols=138 Identities=14% Similarity=0.098 Sum_probs=105.8
Q ss_pred hhhHhHh-hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh--cchhHHHHHHHH
Q 019729 71 PTQAEII-SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS--KDSSFLFMGRLL 147 (336)
Q Consensus 71 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l 147 (336)
...|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+++..+.++..++.+..... .+.+.+.+..++
T Consensus 296 ~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (496)
T PRK03893 296 ALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFF 375 (496)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 3455555 5899999999999999999999999999999999999999888877766665544433 233334444455
Q ss_pred HHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHH
Q 019729 148 EGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVL 208 (336)
Q Consensus 148 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~ 208 (336)
.++...+..+..+.++.|.+|+++|++.+++.+....+|..++|.+++.+ ||+..+.+.+.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~ 440 (496)
T PRK03893 376 QQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSF 440 (496)
T ss_pred HHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHH
Confidence 44444445567778999999999999999999888899999998888655 77776655443
No 137
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.40 E-value=6.8e-12 Score=117.80 Aligned_cols=154 Identities=18% Similarity=0.146 Sum_probs=102.7
Q ss_pred hhHhHhhhccCCchhHHH------------HHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcc--
Q 019729 72 TQAEIISDLKLTISEFSI------------FGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKD-- 137 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-- 137 (336)
..|.+.++.|.+..+.+. ...+..++..++.++.++++||+|||++++++..+.+++.++.++..+
T Consensus 310 ~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~ 389 (502)
T TIGR00887 310 NQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL 389 (502)
T ss_pred ccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 355566777776542211 233445566778899999999999999998888877777665554321
Q ss_pred --hhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc--------------hhHH
Q 019729 138 --SSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV--------------NWRV 201 (336)
Q Consensus 138 --~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------------~w~~ 201 (336)
...+...-+...++..+..+..+.+.+|.+|++.|+++.++.+....+|.+++|.+.+.+ ++..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 469 (502)
T TIGR00887 390 STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGH 469 (502)
T ss_pred chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchH
Confidence 111111111222222334566778889999999999999999999999999998876543 2345
Q ss_pred HHHHhHHHHHHHHHHhhcccCchh
Q 019729 202 LAVLGVLPCTLLIPGLFFIPESPR 225 (336)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~e~~~ 225 (336)
.+++.+++.++..+..+++||++.
T Consensus 470 ~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 470 VLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred HHHHHHHHHHHHHHHheEeccCCC
Confidence 666666666666555667899753
No 138
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.39 E-value=2.2e-11 Score=111.12 Aligned_cols=148 Identities=14% Similarity=0.088 Sum_probs=112.7
Q ss_pred hhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHH-HHHHHHHHHHHHHHh-----hcchhHHHHH
Q 019729 71 PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLM-IAAVPNIIGWLIISF-----SKDSSFLFMG 144 (336)
Q Consensus 71 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~-----~~~~~~~~~~ 144 (336)
...|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.+.. .++.+.+++.
T Consensus 243 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (402)
T TIGR00897 243 VFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALII 322 (402)
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHH
Confidence 3556677889999999999999999999999999999999999988764 333333333333222 2356666778
Q ss_pred HHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhcc
Q 019729 145 RLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFFI 220 (336)
Q Consensus 145 r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 220 (336)
.++.|++.+...+ ....+.|..| ++|+++.|+.+....+|..++|.+++.+ ||+..+++.+++.++..+...|+
T Consensus 323 ~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 323 AIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 8888988877654 4456677655 6899999999999999999999888655 88899998888877766655554
No 139
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.38 E-value=4.7e-11 Score=108.63 Aligned_cols=152 Identities=18% Similarity=0.123 Sum_probs=116.5
Q ss_pred hhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHH
Q 019729 71 PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK-DSSFLFMGRLLEG 149 (336)
Q Consensus 71 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G 149 (336)
...|.+.+++|.+..+.+.+.+++.++..++.++.|++.||+|||+.+..+..+.+++.++....+ +...+ .-++.|
T Consensus 226 ~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g 303 (393)
T PRK09705 226 AWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCG 303 (393)
T ss_pred HHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHH
Confidence 345556567899999999999999999999999999999999999999988877777766554333 22222 234668
Q ss_pred HHhhhhhhhHhHHHHhccC-CCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHHHHH-HhhcccC
Q 019729 150 FGVGVISYTVPVYIAEIAP-QNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIP-GLFFIPE 222 (336)
Q Consensus 150 ~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~-~~~~~~e 222 (336)
++.+...+.......+.++ +++|++..++.+....++..++|.+.+.+ +|+..+++.++..++..+ ...+.||
T Consensus 304 ~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 304 LGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred HhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 8888888877777777775 57899999999999999999999888766 477777777766666544 3556677
Q ss_pred ch
Q 019729 223 SP 224 (336)
Q Consensus 223 ~~ 224 (336)
++
T Consensus 384 ~~ 385 (393)
T PRK09705 384 RF 385 (393)
T ss_pred cc
Confidence 64
No 140
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.37 E-value=2.2e-11 Score=111.96 Aligned_cols=126 Identities=16% Similarity=0.180 Sum_probs=95.7
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH-
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF- 150 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~- 150 (336)
..|.+.++.|.+..+.+.+.++..++..++.++.|++.||+|||+.+..+.++.++..+.....++.....+.-++.|+
T Consensus 253 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (426)
T PRK12307 253 LLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLM 332 (426)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 4566667789998889999999999999999999999999999999988887776665554433322222222233333
Q ss_pred -HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 151 -GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 151 -~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
+..+..+..+.++.|.+|+++|+++.|+......+|..++|.+.+.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 333 ATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred HhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 22233456678889999999999999999988899999999988766
No 141
>TIGR00898 2A0119 cation transport protein.
Probab=99.36 E-value=2.7e-11 Score=113.92 Aligned_cols=135 Identities=16% Similarity=0.111 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHhhhhhhhHhHHHHhcc
Q 019729 90 FGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS--SFLFMGRLLEGFGVGVISYTVPVYIAEIA 167 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G~~~g~~~~~~~~~~~~~~ 167 (336)
...+..+....+.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++..++.+++.+..++....+.+|.+
T Consensus 360 ~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 360 DLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3345566778889999999999999999999999988888887776644 44555566777777888889999999999
Q ss_pred CCCcchhHHhHHHHHHHHHHHHHHHhhccc--hhHHHHHHhHHHHHHHHHHhhcccCch
Q 019729 168 PQNMRGSLGSVNQLSVTIGIMLAYLLGLFV--NWRVLAVLGVLPCTLLIPGLFFIPESP 224 (336)
Q Consensus 168 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~~~~e~~ 224 (336)
|++.|+.+.|+.+....+|.+++|.+.+.. ++...+++.++..++..+..+++||+.
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 999999999999999999999999988722 455677777777777777777889874
No 142
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.35 E-value=3.9e-12 Score=109.22 Aligned_cols=129 Identities=15% Similarity=0.132 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcch
Q 019729 94 ANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRG 173 (336)
Q Consensus 94 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~ 173 (336)
..+...-|.++.+++.||+|||++|.++.++.+++.++...+.+.....+.-+..-++..+.+.+.+.|..|.+|++.|+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 34566789999999999999999999999999999998887765444444444445556677788899999999999999
Q ss_pred hHHhHHHHHHHHHHHHHHHhhccc--hhHHHHHHhHHHHHHHHHHhhcccC
Q 019729 174 SLGSVNQLSVTIGIMLAYLLGLFV--NWRVLAVLGVLPCTLLIPGLFFIPE 222 (336)
Q Consensus 174 ~~~~~~~~~~~~g~~~~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~~~~e 222 (336)
++.|.......+|+++.|+++-.. +-..+..+.+.+.+++.++..++|-
T Consensus 470 tgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeee
Confidence 999999999999999999998333 2234445555666666666667763
No 143
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.35 E-value=1.5e-11 Score=107.91 Aligned_cols=174 Identities=21% Similarity=0.186 Sum_probs=143.2
Q ss_pred HHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHH
Q 019729 49 VFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIG 128 (336)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 128 (336)
-.+.+++.-..+.+|.+. ........-..++|++..+...+..+..+.+.+|++++|++.||+|.|+++..+.+++.+.
T Consensus 253 ~i~~FLiA~~~~~DGv~t-il~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNT-ILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHH
Confidence 344444555556666543 2222222234589999999999999999999999999999999999999999999999988
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHH
Q 019729 129 WLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLA 203 (336)
Q Consensus 129 ~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~ 203 (336)
++..-+......+.++..+.|.+.|..++...+|.++..|+++-+...|+++.....++++||.+.+.+ +-|..+
T Consensus 332 ~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~ 411 (438)
T COG2270 332 ALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGV 411 (438)
T ss_pred HHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHH
Confidence 888777776677788889999999999999999999999999999999999999999999999988766 567777
Q ss_pred HHhHHHHHHHHHHhhcccCc
Q 019729 204 VLGVLPCTLLIPGLFFIPES 223 (336)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~e~ 223 (336)
....++.+++++.++++|+.
T Consensus 412 ~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 412 LSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHhhHhhEEeecCC
Confidence 77777777777777777764
No 144
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.35 E-value=3.2e-11 Score=108.09 Aligned_cols=126 Identities=15% Similarity=0.169 Sum_probs=112.0
Q ss_pred hhHhHhhh-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcc-hhHHHHHHHHHH
Q 019729 72 TQAEIISD-LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKD-SSFLFMGRLLEG 149 (336)
Q Consensus 72 ~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~r~l~G 149 (336)
..|.+.++ +|.+..+.+++.+...++..++.++.+++.||+|||+.+..+..+.+++.++..+.++ .+.+++..++.|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (365)
T TIGR00900 233 LFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIG 312 (365)
T ss_pred HhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHH
Confidence 44555554 8999999999999999999999999999999999999999888888888887777774 778888899999
Q ss_pred HHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 150 FGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 150 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
++.+...+...+++.|.+|+++|++..++.+....+|..++|.+++.+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 313 VGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887654
No 145
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.34 E-value=1.5e-10 Score=105.00 Aligned_cols=142 Identities=15% Similarity=0.118 Sum_probs=115.2
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFG 151 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 151 (336)
..|.+.++.|.+..+.+.+.++..++..+..++.|++.||+|+|+.+.++.++.+++.++.+..++.+.+++..++.|++
T Consensus 227 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 306 (382)
T PRK11128 227 FSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGT 306 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 33445577899998999999999999999999999999999999999999999988888888888989888899999999
Q ss_pred hhhhhhhHhHHHHhccCCCcchhHHhHHH-HHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHH
Q 019729 152 VGVISYTVPVYIAEIAPQNMRGSLGSVNQ-LSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~ 215 (336)
.+...+....++.+. +++++++..+..+ ....+|..+||.+++.+ ++ ..++..+++++++++
T Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 307 FTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 998889988998887 5566788888875 55667777888877666 55 455555555554433
No 146
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.34 E-value=7.2e-11 Score=108.79 Aligned_cols=151 Identities=12% Similarity=-0.012 Sum_probs=97.8
Q ss_pred hhHh-HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHH--h--hcchhHHHHHHH
Q 019729 72 TQAE-IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIIS--F--SKDSSFLFMGRL 146 (336)
Q Consensus 72 ~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~~~~~r~ 146 (336)
..|. +.+++|.+..+.+...++..++..+++++.|+++||+|||+.+.++.++.++..+... . .++....+..-.
T Consensus 265 ~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (432)
T PRK10406 265 YMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVM 344 (432)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 3444 4566899988888888888888899999999999999999988776655433332221 1 122222222222
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHH-HHHHHHHHhhccc---h-hHHHHHHhHHHHHHHHHHhhccc
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVT-IGIMLAYLLGLFV---N-WRVLAVLGVLPCTLLIPGLFFIP 221 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~~~~---~-w~~~~~~~~~~~~~~~~~~~~~~ 221 (336)
+.+++.+...+....+++|++|++.|+++.|+.+.... +++...|.+...+ + |...+++.++..++.++..++++
T Consensus 345 ~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~l~ 424 (432)
T PRK10406 345 CALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLMLH 424 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 23334444455677889999999999999999765444 3333466655444 3 55566666666666655555544
Q ss_pred C
Q 019729 222 E 222 (336)
Q Consensus 222 e 222 (336)
+
T Consensus 425 ~ 425 (432)
T PRK10406 425 R 425 (432)
T ss_pred h
Confidence 3
No 147
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.34 E-value=6.9e-11 Score=107.65 Aligned_cols=135 Identities=13% Similarity=0.117 Sum_probs=113.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHh
Q 019729 81 KLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVP 160 (336)
Q Consensus 81 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 160 (336)
+.+....+.+.++..+...++.+..|++.||+|||+.+.++.++.++...+....++.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566778889999999999999999999999999999999988888888777888888888899999998877777777
Q ss_pred HHHHhccCCCcchhHHhH-HHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHH
Q 019729 161 VYIAEIAPQNMRGSLGSV-NQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 161 ~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~ 215 (336)
.++.+..+++.+++..+. ++....+|.++++.+++.+ ||+..|.+.+++.++..+
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 888888998888887766 6778888888888777655 888898887777665544
No 148
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.34 E-value=9.2e-11 Score=106.86 Aligned_cols=176 Identities=16% Similarity=0.125 Sum_probs=124.6
Q ss_pred hhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHH
Q 019729 46 VSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPN 125 (336)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 125 (336)
|+...+.+++.++....|.+. ...+...+.++.|++.+++.+.+....+...+..+++.++.||+|||+.++.+..+.
T Consensus 268 R~~~~i~~~v~~~qq~sGi~a--i~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~ 345 (485)
T KOG0569|consen 268 RRPLLIGIVVSFAQQFSGINA--IFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLM 345 (485)
T ss_pred hHHHHHHHHHHHHHHhcCcce--eHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 333445555555555554433 344455678888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc---chh------HHHHHHHHHHHHhh-hhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHH----H
Q 019729 126 IIGWLIISFSK---DSS------FLFMGRLLEGFGVG-VISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLA----Y 191 (336)
Q Consensus 126 ~~~~~~~~~~~---~~~------~~~~~r~l~G~~~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~----~ 191 (336)
.+..+++.... +.. ..+++.++..++.+ +..|+.+-+.+|++|++.|..+.++......+..++- |
T Consensus 346 ~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp 425 (485)
T KOG0569|consen 346 AVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFP 425 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887776532 111 12334444444333 4578889999999999999999998877777665544 3
Q ss_pred HhhccchhHHHHHHhHHHHHHH-HHHhhcccCch
Q 019729 192 LLGLFVNWRVLAVLGVLPCTLL-IPGLFFIPESP 224 (336)
Q Consensus 192 ~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~e~~ 224 (336)
.+...+|- +.|++..+++++. +..+..+|||+
T Consensus 426 ~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 426 PLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 34444454 5555555555555 44666799995
No 149
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.33 E-value=1.1e-10 Score=109.12 Aligned_cols=151 Identities=12% Similarity=0.151 Sum_probs=114.7
Q ss_pred hHhHhhhccCCchhHHHHH-HHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH---Hhh-cchhHHHHHHHH
Q 019729 73 QAEIISDLKLTISEFSIFG-SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLII---SFS-KDSSFLFMGRLL 147 (336)
Q Consensus 73 ~~~~~~~~g~s~~~~~~~~-~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~r~l 147 (336)
.|.+.+++|++..+.+++. ....++..++.+++|+++||+|+|+.+.++.++.+++.+.. +.. ++...+.+.-++
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l 325 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFF 325 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 3445667899999999987 46668999999999999999999998877666555544322 232 344444555666
Q ss_pred HHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhcccCc
Q 019729 148 EGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFFIPES 223 (336)
Q Consensus 148 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e~ 223 (336)
..++.|...+...++..+..+++.+++..++.+....+|..+++.+++.+ ||+..|.+.+++++++++...+++++
T Consensus 326 ~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 326 ENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66666666677788899999999999999999998899988776666554 89999999888888887766665543
No 150
>PRK09669 putative symporter YagG; Provisional
Probab=99.33 E-value=4.4e-11 Score=110.62 Aligned_cols=151 Identities=15% Similarity=0.074 Sum_probs=107.4
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----hchh-HHHHHHHHHHHHHHHHHHhhcc------hhH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEY----IGRK-GSLMIAAVPNIIGWLIISFSKD------SSF 140 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~ 140 (336)
....+.+.+|++...+|.+.++..+...+..|+.|+++|| +||| +.++.+.+..+++.++....++ ...
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~ 111 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIY 111 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 3445778899999999999999999999999999999999 7774 5555676777777665555543 345
Q ss_pred HHHHHHHHHHHhhhhhhhHhHHHHhcc-CCCcchhHHhHHHHHHHHHHHHHHHhh----cc-------chhHHHHHHhHH
Q 019729 141 LFMGRLLEGFGVGVISYTVPVYIAEIA-PQNMRGSLGSVNQLSVTIGIMLAYLLG----LF-------VNWRVLAVLGVL 208 (336)
Q Consensus 141 ~~~~r~l~G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~----~~-------~~w~~~~~~~~~ 208 (336)
+++..++.+.+.........++.+|+. ++++|.+..++...+..+|..+++.+. .. .+|+..+.+.++
T Consensus 112 ~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~i 191 (444)
T PRK09669 112 ACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGL 191 (444)
T ss_pred HHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 555666667766677777788999988 558899888887776666666654432 21 267777777666
Q ss_pred HHHHHHH-HhhcccC
Q 019729 209 PCTLLIP-GLFFIPE 222 (336)
Q Consensus 209 ~~~~~~~-~~~~~~e 222 (336)
++++..+ ..+..+|
T Consensus 192 i~~v~~~~~~~~~~e 206 (444)
T PRK09669 192 LGVVLFFCCFFMTKE 206 (444)
T ss_pred HHHHHHHHHhCCeEE
Confidence 6555543 3334454
No 151
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.33 E-value=4.9e-11 Score=109.93 Aligned_cols=147 Identities=16% Similarity=0.109 Sum_probs=100.0
Q ss_pred hhHhHh-hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh--chhHHH-HHHHHHHHHHHHHHH--hhcchhHHHHHH
Q 019729 72 TQAEII-SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI--GRKGSL-MIAAVPNIIGWLIIS--FSKDSSFLFMGR 145 (336)
Q Consensus 72 ~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~--~~~~~~~~~~~r 145 (336)
..|.+. +++|++..+.+...++..++..++.++.|+++||+ ++|+.. ....+...+...... ...+.....+..
T Consensus 265 ~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (434)
T PRK11663 265 WGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACF 344 (434)
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHH
Confidence 445454 67899999999999999999999999999999999 333332 222111111111111 122333333344
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhh
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLF 218 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 218 (336)
+..|++...........+.|.+|+++|+++.|+.+....+|..++|.+.+.+ ||+..|++.++++++..+..+
T Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 345 FTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 4455543333334456778999999999999999999999999998887665 899999888887777655443
No 152
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.32 E-value=3.7e-11 Score=111.96 Aligned_cols=145 Identities=11% Similarity=0.035 Sum_probs=108.0
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchh-------HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRK-------GSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLE 148 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 148 (336)
+.+++|++..+.+.+.++..++..++.+++|+++||+||| ..+.+..++.+++.++....++.+..++.-++.
T Consensus 279 l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~ 358 (476)
T PLN00028 279 FYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILF 358 (476)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999876 233333333344444445555655555556667
Q ss_pred HHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc---chhHHHHHHhHHHHHHHHHHhhccc
Q 019729 149 GFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF---VNWRVLAVLGVLPCTLLIPGLFFIP 221 (336)
Q Consensus 149 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~---~~w~~~~~~~~~~~~~~~~~~~~~~ 221 (336)
+++.+...+...+++.+..| ++|+...|+.+.+..+|+++++.+... .+|+..|++.+++.+++.++.++++
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 359 SIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 77666666666667777654 789999999998888999888877642 2699999988888888777666665
No 153
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.31 E-value=4.4e-10 Score=102.11 Aligned_cols=143 Identities=11% Similarity=0.069 Sum_probs=107.6
Q ss_pred HhHhhhccCCchhHHHHHHHHH-HHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh------hcchhHHHHHHH
Q 019729 74 AEIISDLKLTISEFSIFGSLAN-VGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF------SKDSSFLFMGRL 146 (336)
Q Consensus 74 ~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~r~ 146 (336)
+.+.+|.|+++++.+++..+.. ....++.++.|++.||+|+|+.+.++..+.++..+.... .++...+.....
T Consensus 232 ~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (390)
T TIGR02718 232 KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSA 311 (390)
T ss_pred hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHH
Confidence 4455668999999999888776 466778999999999999999998877665333332221 123333444555
Q ss_pred HHHHHhhhhhhhHhHHHHhccCC-CcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHH
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQ-NMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPG 216 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 216 (336)
+.+++.|...+...+.+.+..++ +.+++..++.+....+|..++|.+++.+ ||+..|++.+++.++.++.
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 312 FGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 66777777878888887788776 8899999999999999999999998765 7888888877776665443
No 154
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.31 E-value=1.8e-10 Score=96.46 Aligned_cols=156 Identities=18% Similarity=0.235 Sum_probs=119.5
Q ss_pred cccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh-------cchh
Q 019729 67 GYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS-------KDSS 139 (336)
Q Consensus 67 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~ 139 (336)
..++...|++++.+|+|.++...+.++..+|..+| ++.|.+.|++|.+.++.+|.+...++..+...+ .+++
T Consensus 19 Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~ 97 (250)
T PF06813_consen 19 YTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVW 97 (250)
T ss_pred cchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchH
Confidence 44556678899999999999999999999999875 889999999999999999999998888776653 3567
Q ss_pred HHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc---hh-HHHHHHhHHHHHHHHH
Q 019729 140 FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---NW-RVLAVLGVLPCTLLIP 215 (336)
Q Consensus 140 ~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w-~~~~~~~~~~~~~~~~ 215 (336)
.+.+..++.|.+.+...+.......+.|| ++||++.|+.-...++++.+-..+...+ +- ...+.....+.+++++
T Consensus 98 ~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~ 176 (250)
T PF06813_consen 98 LMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLV 176 (250)
T ss_pred HHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 77777888888877777777777778898 6899999999999999887766655443 22 2333334444555555
Q ss_pred HhhcccCch
Q 019729 216 GLFFIPESP 224 (336)
Q Consensus 216 ~~~~~~e~~ 224 (336)
..++++..|
T Consensus 177 ~~~~vr~~~ 185 (250)
T PF06813_consen 177 AMFFVRPVP 185 (250)
T ss_pred HhhheeccC
Confidence 656665443
No 155
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.31 E-value=1.9e-10 Score=103.27 Aligned_cols=174 Identities=15% Similarity=0.194 Sum_probs=133.8
Q ss_pred CChhhHHHHHHHHHhhhhhhccccccchhhHhHhhh----ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-chhHHH
Q 019729 44 GSVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISD----LKLTISEFSIFGSLANVGAMVGAIASGQIAEYI-GRKGSL 118 (336)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~l 118 (336)
+++..+.+..+=..=.|.++-.+. +..-++..+ +|++++++.-+.+++..---+..+++||++||+ |+|+++
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmra---iL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRA---ILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHH---HHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 445555554444444444432222 222234444 449999988888888887788899999999996 999999
Q ss_pred HHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCc--chhHHhHHHHHHHHHHHHHHHhh
Q 019729 119 MIAAVPNIIGWLIISFSK--DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNM--RGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
.++.++++++-++.+.+. +...++++-.+.++|.|..=+-..+++.|.+|+++ |-...+++.++.++|++++|.+.
T Consensus 96 ~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~ 175 (498)
T COG3104 96 VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIIT 175 (498)
T ss_pred HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHH
Confidence 999999999999999884 78889999999999999999999999999998643 45577778888889999888888
Q ss_pred ccc----hhHHHHHHhHHHHHHHHHHhhcc
Q 019729 195 LFV----NWRVLAVLGVLPCTLLIPGLFFI 220 (336)
Q Consensus 195 ~~~----~w~~~~~~~~~~~~~~~~~~~~~ 220 (336)
+++ ||...|..+++-..++++..+..
T Consensus 176 ~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 176 GLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 766 89999988887777766655443
No 156
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.29 E-value=2.2e-12 Score=106.99 Aligned_cols=147 Identities=16% Similarity=0.171 Sum_probs=119.3
Q ss_pred hhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-hchhHHHHHHHHHH
Q 019729 47 SVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEY-IGRKGSLMIAAVPN 125 (336)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~ 125 (336)
++.++++.+|+..|..+++.........+.+.+.+++.++..++.+++..-..+-++++|++.|| +|-|..-++-+...
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 44556666666667777888777777888888889988899999999999999999999999997 68777665555555
Q ss_pred HHHHHHHHh---hcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHh
Q 019729 126 IIGWLIISF---SKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL 193 (336)
Q Consensus 126 ~~~~~~~~~---~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 193 (336)
.++-++++. .+.+|++.++|++.|+|.-..-.+...|+..||..|+-+.++|+......+|+.+--.+
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~l 191 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLL 191 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeee
Confidence 566665553 57899999999999999877778889999999999999999999988888887654333
No 157
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.29 E-value=6.8e-10 Score=96.25 Aligned_cols=153 Identities=12% Similarity=0.142 Sum_probs=104.8
Q ss_pred chhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 019729 70 SPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEG 149 (336)
Q Consensus 70 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 149 (336)
+|..=.+.+++|+++.+++.+....+....+..++.|.++||+|||+.-++.+++++++++ +-..++++.++++|++.|
T Consensus 54 GpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgG 132 (354)
T PF05631_consen 54 GPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGG 132 (354)
T ss_pred cchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHH
Confidence 3443345578999999999999999999999999999999999999999999999999986 455688999999999999
Q ss_pred HHhhhhhhhHhHHH-HhccCCCcc----hhHHhHHH-HHHHHHHHHHHHhhcc----c--hhHHHHHHhHHHHHHHHHHh
Q 019729 150 FGVGVISYTVPVYI-AEIAPQNMR----GSLGSVNQ-LSVTIGIMLAYLLGLF----V--NWRVLAVLGVLPCTLLIPGL 217 (336)
Q Consensus 150 ~~~g~~~~~~~~~~-~~~~~~~~r----~~~~~~~~-~~~~~g~~~~~~~~~~----~--~w~~~~~~~~~~~~~~~~~~ 217 (336)
++....+.+--+++ .|.-..+.+ +...+... ...++-.+++..++.. . |...+|.....+.+++.++.
T Consensus 133 iaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 133 IATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 99999888876554 454222211 11121111 1122222333333322 2 33567877777766665544
Q ss_pred h-cccCc
Q 019729 218 F-FIPES 223 (336)
Q Consensus 218 ~-~~~e~ 223 (336)
. .-+|.
T Consensus 213 ~~~W~EN 219 (354)
T PF05631_consen 213 LKTWPEN 219 (354)
T ss_pred Hhccccc
Confidence 3 33454
No 158
>PRK10504 putative transporter; Provisional
Probab=99.29 E-value=2e-10 Score=107.12 Aligned_cols=126 Identities=11% Similarity=0.069 Sum_probs=104.2
Q ss_pred hhHhHhh-hccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh---cchhHHHHHHHH
Q 019729 72 TQAEIIS-DLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---KDSSFLFMGRLL 147 (336)
Q Consensus 72 ~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l 147 (336)
..|.+.+ .+|.++.+.+++.....++..++.++.|++.||+|||+++..+..+.+++.++..+. ++.+.+.+..++
T Consensus 283 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (471)
T PRK10504 283 MTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFL 362 (471)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 4555544 589999999999998889999999999999999999999999988887776666553 233334456777
Q ss_pred HHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 148 EGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 148 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
.|++.+..++....++.+..|++.|+.+.++.+....+|..+|+.+++.+
T Consensus 363 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 363 QGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888889999999999999999999999999999999998887654
No 159
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.28 E-value=7.1e-11 Score=110.06 Aligned_cols=150 Identities=11% Similarity=0.118 Sum_probs=104.5
Q ss_pred HhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHh----hhch-hHHHHHHHHHHHHHHHHHHhhcc------hhHHH
Q 019729 74 AEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAE----YIGR-KGSLMIAAVPNIIGWLIISFSKD------SSFLF 142 (336)
Q Consensus 74 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~~~~ 142 (336)
..+.+.+|++...+|.+..+.-+...+..|+.|+++| |+|| |+.++++....+++.+++...++ +..++
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~ 110 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVC 110 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 3456678999999999999999999999999999999 5698 55666677777777655544332 23445
Q ss_pred HHHHHHHHHhhhhhhhHhHHHHhcc-CCCcchhHHhHHHHHHHHHHHHHHHhhc----c-------chhHHHHHHhHHHH
Q 019729 143 MGRLLEGFGVGVISYTVPVYIAEIA-PQNMRGSLGSVNQLSVTIGIMLAYLLGL----F-------VNWRVLAVLGVLPC 210 (336)
Q Consensus 143 ~~r~l~G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~----~-------~~w~~~~~~~~~~~ 210 (336)
+..++.+++.........++..|.. ++++|.+..++-..+..+|.++.+.+.. . .+|+...++.+++.
T Consensus 111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~ 190 (473)
T PRK10429 111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFF 190 (473)
T ss_pred HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 5566777788788888899999999 5899999888866666665444433221 1 14666666655555
Q ss_pred HHHHH-HhhcccCc
Q 019729 211 TLLIP-GLFFIPES 223 (336)
Q Consensus 211 ~~~~~-~~~~~~e~ 223 (336)
++..+ ..+..+|.
T Consensus 191 ~~~~~~~~~~~~e~ 204 (473)
T PRK10429 191 IVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHcCceec
Confidence 54433 33445654
No 160
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.28 E-value=1.8e-10 Score=107.50 Aligned_cols=144 Identities=17% Similarity=0.189 Sum_probs=123.2
Q ss_pred hhHhHh-hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 019729 72 TQAEII-SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF 150 (336)
Q Consensus 72 ~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 150 (336)
.+|.+. +++|.+....|++.++..+|.++|.++.+++.+|+++++.+..+.++.+++.+..+++++.+..++..++.|+
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~ 319 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGA 319 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 455554 5689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHH
Q 019729 151 GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~ 215 (336)
+.....+...+.+.+..|++.||+.++++++....+..+|..+.+.+ |.+..+.+.++..++..+
T Consensus 320 ~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~ 388 (524)
T PF05977_consen 320 AWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSAL 388 (524)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 99999889999999999999999999998877777666666666554 777777776665544433
No 161
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.28 E-value=9.7e-11 Score=102.84 Aligned_cols=170 Identities=14% Similarity=0.107 Sum_probs=123.8
Q ss_pred CChhhHHHHHHHHHhhhhhhccccccchhhHh-HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh--chhHHHHH
Q 019729 44 GSVSVVFCVLVVALGPIQFGFTCGYSSPTQAE-IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI--GRKGSLMI 120 (336)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~l~~ 120 (336)
.++..|.+.+.-.+ .++.+..+.--.|. +.|..|+|..++++..+.+-.+++.|.+++|+++||. |||.+..+
T Consensus 250 ~Nk~iW~la~a~vf----vYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~ 325 (448)
T COG2271 250 KNKLIWLLALANVF----VYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMAL 325 (448)
T ss_pred cChHHHHHHHHHHH----HHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHH
Confidence 34455555443333 33344333333332 5677899999999999999999999999999999996 77766554
Q ss_pred HH-HHHHHHHHHHHhhc--chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHH-HHHHHHHhhcc
Q 019729 121 AA-VPNIIGWLIISFSK--DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTI-GIMLAYLLGLF 196 (336)
Q Consensus 121 ~~-~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~ 196 (336)
.. ++..++.+..-.++ |+.+..++-+++|+..-+..-.......|..|++.-|++.|+.+.+..+ |...+....+.
T Consensus 326 i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~ 405 (448)
T COG2271 326 IFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGY 405 (448)
T ss_pred HHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCccee
Confidence 44 33344444444454 4578888899999988888888888899999999999999999988888 77777665555
Q ss_pred c----hhHHHHHHhHHHHHHHHHHh
Q 019729 197 V----NWRVLAVLGVLPCTLLIPGL 217 (336)
Q Consensus 197 ~----~w~~~~~~~~~~~~~~~~~~ 217 (336)
+ ||...|++..+.++++.+++
T Consensus 406 i~d~~gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 406 IADTWGWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred eEecCCCcchHHHHHHHHHHHHHHH
Confidence 4 89988888777666665443
No 162
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.28 E-value=4.8e-10 Score=103.37 Aligned_cols=115 Identities=23% Similarity=0.346 Sum_probs=96.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhhhhhhhHhH
Q 019729 83 TISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS-KDSSFLFMGRLLEGFGVGVISYTVPV 161 (336)
Q Consensus 83 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~~~~~~~ 161 (336)
+....+++.++..++..++.+++++++||+|+|+++.++.++.+++.+...+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567788888899999999999999999999999999988888887776665 35566677788899999999999999
Q ss_pred HHHhccC-------CCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 162 YIAEIAP-------QNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 162 ~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
+++|..+ ++.+|...++.+....+|..+++.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998875 55679999999999999988888877544
No 163
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.27 E-value=1.1e-10 Score=107.76 Aligned_cols=152 Identities=11% Similarity=0.073 Sum_probs=96.1
Q ss_pred hhHhHh-hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHH---HHHHHHHhh--cchhHHHHHH
Q 019729 72 TQAEII-SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNI---IGWLIISFS--KDSSFLFMGR 145 (336)
Q Consensus 72 ~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~--~~~~~~~~~r 145 (336)
..|.+. +..|.+..+.++..++..++..++.++.|+++||+|+++....+..+.. ++.+..... .+.+...+..
T Consensus 273 ~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (438)
T TIGR00712 273 WSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICM 352 (438)
T ss_pred hHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 344444 4579999999999999999999999999999999975432222322221 222222222 2333333344
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHH-HHHHHHhhccc----hhHHHHHHhHHHHHHHHH-Hhhc
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIG-IMLAYLLGLFV----NWRVLAVLGVLPCTLLIP-GLFF 219 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~-~~~~ 219 (336)
++.|++..+..........|.+|+++|+++.|+.+....+| .+++|.+.+.+ ||...+++.....+++.+ .+++
T Consensus 353 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T TIGR00712 353 IVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 432 (438)
T ss_pred HHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 45555432222233356789999999999999988776665 45677776544 788888877666655544 3444
Q ss_pred ccCc
Q 019729 220 IPES 223 (336)
Q Consensus 220 ~~e~ 223 (336)
.||.
T Consensus 433 ~~~~ 436 (438)
T TIGR00712 433 MIGE 436 (438)
T ss_pred Hhhc
Confidence 5553
No 164
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.25 E-value=9.4e-11 Score=105.52 Aligned_cols=127 Identities=17% Similarity=0.213 Sum_probs=92.2
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhch-hHHHH-HHH-HHHHHHHHHHHh--hcchhHHHHHHHHHHH
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGR-KGSLM-IAA-VPNIIGWLIISF--SKDSSFLFMGRLLEGF 150 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~l~-~~~-~~~~~~~~~~~~--~~~~~~~~~~r~l~G~ 150 (336)
+.+++|.+..+.+++.+...++..++.++.|++.||.++ |+... ... ....++...... ..+....++..++.|+
T Consensus 243 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 322 (379)
T TIGR00881 243 LTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGF 322 (379)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH
Confidence 456689999999999999999999999999999998643 33222 222 122222222222 2344455566777777
Q ss_pred HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHH
Q 019729 151 GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVL 202 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~ 202 (336)
......+....++.|.+|+++|+++.++.+....+|..++|.+.+.+ ||++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 323 LVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred HHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 66666667778899999999999999999999999999998887665 56543
No 165
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.24 E-value=1.1e-10 Score=108.34 Aligned_cols=156 Identities=17% Similarity=0.171 Sum_probs=140.9
Q ss_pred ccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 019729 66 CGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIG--RKGSLMIAAVPNIIGWLIISFSKDSSFLFM 143 (336)
Q Consensus 66 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (336)
.......+|.+.++.|.+..+++.+.++..+...++.++.|+++|+.. ++.+..+++++.+++.+.+.+.++++.++.
T Consensus 314 ~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~ 393 (509)
T KOG2504|consen 314 FNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIV 393 (509)
T ss_pred HHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 344455678888899999999999999999999999999999999988 566777888888888899999999999999
Q ss_pred HHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHHHHHHhh
Q 019729 144 GRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLF 218 (336)
Q Consensus 144 ~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~ 218 (336)
.-.+.|++.|.........+.|..+.++-..+.|+.....+++..+||++++.+ +|...|+++++..+++.++++
T Consensus 394 ~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~ 473 (509)
T KOG2504|consen 394 FSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLL 473 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999876 588999999999888887777
Q ss_pred ccc
Q 019729 219 FIP 221 (336)
Q Consensus 219 ~~~ 221 (336)
..|
T Consensus 474 ~~~ 476 (509)
T KOG2504|consen 474 ILR 476 (509)
T ss_pred HhH
Confidence 766
No 166
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.24 E-value=4.5e-11 Score=110.03 Aligned_cols=151 Identities=17% Similarity=0.237 Sum_probs=114.5
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHh----hhchhHHHH-HHHHHHHHHHHHHHhh-c-------ch
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAE----YIGRKGSLM-IAAVPNIIGWLIISFS-K-------DS 138 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~l~-~~~~~~~~~~~~~~~~-~-------~~ 138 (336)
..+.+.+..|+++...+.+..+..+..++..|+.|.++| |+||||..+ ++....+++.+++... + ..
T Consensus 24 ~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~ 103 (428)
T PF13347_consen 24 LLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKL 103 (428)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHH
Confidence 345577788999999999999999999999999999999 899766555 6777777777777765 4 12
Q ss_pred hHHHHHHHHHHHHhhhhhhhHhHHHHhccC-CCcchhHHhHHHHHHHHHHHHHHHhhcc----c-------hhHHHHHHh
Q 019729 139 SFLFMGRLLEGFGVGVISYTVPVYIAEIAP-QNMRGSLGSVNQLSVTIGIMLAYLLGLF----V-------NWRVLAVLG 206 (336)
Q Consensus 139 ~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~----~-------~w~~~~~~~ 206 (336)
..+.+..++..++.........++..|..+ +++|.+..+.-..+..+|.++...+... + +|++..++.
T Consensus 104 ~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~ 183 (428)
T PF13347_consen 104 VWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVL 183 (428)
T ss_pred HHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHH
Confidence 335666777788888888889999999998 5789999998888777777644443322 1 588888877
Q ss_pred HHHHHHHHH-HhhcccC
Q 019729 207 VLPCTLLIP-GLFFIPE 222 (336)
Q Consensus 207 ~~~~~~~~~-~~~~~~e 222 (336)
+++.++..+ ..+..+|
T Consensus 184 ~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 184 AIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHhhhhhheeee
Confidence 777666644 4455666
No 167
>PRK15075 citrate-proton symporter; Provisional
Probab=99.24 E-value=7.3e-10 Score=102.18 Aligned_cols=127 Identities=17% Similarity=0.148 Sum_probs=90.8
Q ss_pred hhhHhHh-hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHH-HHH---hhcchhHHHHHH
Q 019729 71 PTQAEII-SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWL-IIS---FSKDSSFLFMGR 145 (336)
Q Consensus 71 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~---~~~~~~~~~~~r 145 (336)
...|.+. +.+|++..+.+++.....++..++.++.|+++||+|||+++..+..+..+..+ ... ..++...+.+..
T Consensus 259 ~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (434)
T PRK15075 259 VYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVE 338 (434)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 3455554 44899988889998899999999999999999999999988876554433221 111 123333444445
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHH-HHHHHHHHHHHHhhccc
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQ-LSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~ 197 (336)
++.|++.+...+....++.|.+|++.|+.+.++.+ .+..+++.++|.+.+.+
T Consensus 339 ~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 339 LWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred HHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 66677777777777789999999999999999854 44445566677776543
No 168
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.22 E-value=3.9e-10 Score=100.87 Aligned_cols=153 Identities=18% Similarity=0.162 Sum_probs=93.0
Q ss_pred ccccchhhHhHh-hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHH--HHHH-HHHHhh----cc
Q 019729 66 CGYSSPTQAEII-SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPN--IIGW-LIISFS----KD 137 (336)
Q Consensus 66 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~--~~~~-~~~~~~----~~ 137 (336)
.+...|..+... ++.|++.++.|.+.++..+..++.+++.|.++||+|.||-++....+. ..+. +...+. .|
T Consensus 23 ~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n 102 (412)
T PF01306_consen 23 WGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSN 102 (412)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555544 458999999999999999999999999999999999776554433222 1122 221222 22
Q ss_pred h-hHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc---hhHHHHHHhHHHHHHH
Q 019729 138 S-SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---NWRVLAVLGVLPCTLL 213 (336)
Q Consensus 138 ~-~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~ 213 (336)
. ...+++.+..|+......++.-+++.++. ++.+.-.|-.-.++++|.+++..+++.+ +.+..||++...+++.
T Consensus 103 ~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il 180 (412)
T PF01306_consen 103 FWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIIL 180 (412)
T ss_dssp -HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHH
Confidence 2 22233334445555555566666665554 3345555666677788888888777766 5667888877666655
Q ss_pred HHHhhcc
Q 019729 214 IPGLFFI 220 (336)
Q Consensus 214 ~~~~~~~ 220 (336)
.++.++.
T Consensus 181 ~lll~~~ 187 (412)
T PF01306_consen 181 LLLLLLL 187 (412)
T ss_dssp HHHHHSS
T ss_pred HHHHHHc
Confidence 5444443
No 169
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.22 E-value=1.5e-09 Score=96.11 Aligned_cols=150 Identities=17% Similarity=0.239 Sum_probs=119.4
Q ss_pred ccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHH
Q 019729 68 YSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK-DSSFLFMGRL 146 (336)
Q Consensus 68 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~ 146 (336)
.++..-|.+++..|++.+..+++.-++.++..+|..++|++.|| +.|+.+.....+.++..+...+.. +.+..++.-+
T Consensus 230 ~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~ 308 (394)
T COG2814 230 LYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLF 308 (394)
T ss_pred hHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 34456677888999999999999999999999999999999999 999999988888777777666654 4555555666
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhc
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFF 219 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 219 (336)
+.|+..+.........+++ .-++.+..+.++....+++|..+|..+++.+ |+....++++++.++++++.+.
T Consensus 309 ~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 309 LWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred HHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 6777776666666666666 3358899999999888888888888888655 8889999998888887665543
No 170
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.22 E-value=3.5e-09 Score=94.33 Aligned_cols=155 Identities=15% Similarity=0.251 Sum_probs=124.2
Q ss_pred hhHhHhhh-ccCCchhHH-HHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 019729 72 TQAEIISD-LKLTISEFS-IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEG 149 (336)
Q Consensus 72 ~~~~~~~~-~g~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 149 (336)
..|.+.+. .|++.+++. -+.-+..-.++...++...+.|..|.|++++++.+...+...+..+.++...+-+..++.|
T Consensus 26 l~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg 105 (412)
T PF01770_consen 26 LTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYG 105 (412)
T ss_pred chHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 34445554 789888764 5666667788889999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc------hhHHHHHHhHHHHHHHHHHhhcccCc
Q 019729 150 FGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPES 223 (336)
Q Consensus 150 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~~~~~~~~~~~~e~ 223 (336)
++.+ ...+..+|+-...|+++-.++.+....+..+|.+++..+++.+ +++...++......++++..+++|..
T Consensus 106 ~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 106 LATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9884 4777788888888888888888888888878877777777554 56666667666666667777788876
Q ss_pred hhHH
Q 019729 224 PRWL 227 (336)
Q Consensus 224 ~~~~ 227 (336)
++-.
T Consensus 185 ~~S~ 188 (412)
T PF01770_consen 185 KRSL 188 (412)
T ss_pred Cccc
Confidence 6533
No 171
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.22 E-value=8.2e-10 Score=100.79 Aligned_cols=148 Identities=16% Similarity=0.143 Sum_probs=100.4
Q ss_pred HhHhhhccCCchhHHHHHHHHH-HHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH---Hhh-cchhHHHHHH---
Q 019729 74 AEIISDLKLTISEFSIFGSLAN-VGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLII---SFS-KDSSFLFMGR--- 145 (336)
Q Consensus 74 ~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~r--- 145 (336)
+.+.+++|+++++.+++.+... ++..++.+++|++.||+|+|+.+.++.++.++..+.. ++. ++.+.+++.-
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 3466778999999999886654 5689999999999999999998887777666554333 343 3445444444
Q ss_pred -HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccchhHHHHHHhHHHHHHHHHHhhccc
Q 019729 146 -LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIP 221 (336)
Q Consensus 146 -~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 221 (336)
+..|++.+...+....++.+.+|.+.++...+....+..+++.++..+...+||+..|.+.++++++.+++.+..+
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556667777777788888888766655433333333333333444444556999999998888877766654433
No 172
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.21 E-value=4.4e-10 Score=115.93 Aligned_cols=138 Identities=16% Similarity=0.193 Sum_probs=116.4
Q ss_pred hHhhhccCCch-hHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhh
Q 019729 75 EIISDLKLTIS-EFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVG 153 (336)
Q Consensus 75 ~~~~~~g~s~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 153 (336)
.+.+.+|.+.. ..+++.++..++.+++.+++|+++||+++|+.+.++.++.+++.++..+..+.+.++++.++.|++.+
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 337 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAG 337 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 35667899988 89999999999999999999999999999999999988888888888888888888888999999999
Q ss_pred hhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHH
Q 019729 154 VISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTL 212 (336)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~ 212 (336)
+..+...+++.+..|++.|++++++.+....+|.++++.++..+ ++...+++.+.+.++
T Consensus 338 ~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 338 LFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988888887777766544 344455554444333
No 173
>PRK10054 putative transporter; Provisional
Probab=99.19 E-value=5.6e-10 Score=101.59 Aligned_cols=146 Identities=15% Similarity=0.056 Sum_probs=110.7
Q ss_pred hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhhhhh
Q 019729 78 SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS-KDSSFLFMGRLLEGFGVGVIS 156 (336)
Q Consensus 78 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~~ 156 (336)
++.+.+....+++.++..+.....+++.|.+.||+++|+.+..+..+.+++.+...+. ++.+.+++..++.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777888888888888888999999999999999999988888887777664 466667778899999998888
Q ss_pred hhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHH-HhhcccCch
Q 019729 157 YTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIP-GLFFIPESP 224 (336)
Q Consensus 157 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~-~~~~~~e~~ 224 (336)
|....++.+..|++.|++..+..+ ...+|..+||.+++.+ +.+..|++.+....+..+ .....+|.|
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 888899999999999999988655 4557888888887665 566666665444443333 233344443
No 174
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.19 E-value=1.5e-09 Score=97.20 Aligned_cols=144 Identities=16% Similarity=0.138 Sum_probs=118.4
Q ss_pred hccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhh
Q 019729 79 DLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYT 158 (336)
Q Consensus 79 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 158 (336)
+-+.+....|.+.++..+.-.+...+.+++.+|+|.|+.++++..++++=.++++++++.+.+.+.+.+.|+..+.....
T Consensus 253 ~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva 332 (412)
T PF01306_consen 253 SAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVA 332 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 33445567899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHhccCCCcchhHHhH-HHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHH-HhhcccC
Q 019729 159 VPVYIAEIAPQNMRGSLGSV-NQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIP-GLFFIPE 222 (336)
Q Consensus 159 ~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~-~~~~~~e 222 (336)
...|+++.+|+|..++...+ .+....+|.++.+.+++.+ |.+..|++.+.+.++..+ ..+.+++
T Consensus 333 ~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 333 AFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 99999999999988888877 4678888888888887766 888888877776665544 4444544
No 175
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.18 E-value=2.8e-09 Score=96.53 Aligned_cols=153 Identities=20% Similarity=0.324 Sum_probs=118.9
Q ss_pred hhhHhHhhhcc-CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh-cchhHHHHH----
Q 019729 71 PTQAEIISDLK-LTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS-KDSSFLFMG---- 144 (336)
Q Consensus 71 ~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~---- 144 (336)
...+.+.++.| .+....+.+.++..++-++.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+...+.
T Consensus 228 ~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~ 307 (400)
T PF03825_consen 228 TFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLG 307 (400)
T ss_pred HHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 34455666777 777778888888888889999999999999999999999999999988888887 454443333
Q ss_pred HHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHH-HHHHHHHHHHHhhccc----------hhHHHHHHhHHHHHHH
Q 019729 145 RLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQL-SVTIGIMLAYLLGLFV----------NWRVLAVLGVLPCTLL 213 (336)
Q Consensus 145 r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~~----------~w~~~~~~~~~~~~~~ 213 (336)
..+.|+..+..+.....|+.+..|++.|+++.++++. ..++|..+|..+++.+ .|...+.+.+.+.++.
T Consensus 308 q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~ 387 (400)
T PF03825_consen 308 QLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVI 387 (400)
T ss_pred HhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHH
Confidence 4569999999999999999999999999999999765 5788999988888766 3445555666655555
Q ss_pred HH-HhhcccCc
Q 019729 214 IP-GLFFIPES 223 (336)
Q Consensus 214 ~~-~~~~~~e~ 223 (336)
.+ .+++++|+
T Consensus 388 ~~~f~~~fk~~ 398 (400)
T PF03825_consen 388 LVLFVILFKPK 398 (400)
T ss_pred HHHHHhhccCC
Confidence 44 33445543
No 176
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.18 E-value=3.4e-09 Score=95.85 Aligned_cols=118 Identities=17% Similarity=0.293 Sum_probs=94.7
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh-----cchhHHHHHHHHHHH
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS-----KDSSFLFMGRLLEGF 150 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~ 150 (336)
+.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.+++... ++...++...++.|+
T Consensus 233 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 312 (385)
T TIGR00710 233 YIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGI 312 (385)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999999988887777776655543 233445556778899
Q ss_pred HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHH-HHHHHHHHhh
Q 019729 151 GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVT-IGIMLAYLLG 194 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~ 194 (336)
+.+...+.......|..| ++|+++.++.+.... .|.+.++.++
T Consensus 313 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 313 GNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 998889999899999887 679999998776654 4666666655
No 177
>PRK11462 putative transporter; Provisional
Probab=99.18 E-value=3e-09 Score=98.66 Aligned_cols=143 Identities=14% Similarity=0.042 Sum_probs=105.9
Q ss_pred hHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----hchhHHHH-HHHHHHHHHHHHHHhhcc------hhHH
Q 019729 73 QAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEY----IGRKGSLM-IAAVPNIIGWLIISFSKD------SSFL 141 (336)
Q Consensus 73 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~l~-~~~~~~~~~~~~~~~~~~------~~~~ 141 (336)
...+.+..|+++..+|.+..+.-+.-++.-|+.|.++|| +||||..+ ++.+..+++.+++...++ ...+
T Consensus 33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~ 112 (460)
T PRK11462 33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYA 112 (460)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 334667789999999999999999999999999999996 69865554 566777777766654442 2345
Q ss_pred HHHHHHHHHHhhhhhhhHhHHHHhccC-CCcchhHHhHHHHHHHHHHHHHHHhhcc----c-------hhHHHHHHhHHH
Q 019729 142 FMGRLLEGFGVGVISYTVPVYIAEIAP-QNMRGSLGSVNQLSVTIGIMLAYLLGLF----V-------NWRVLAVLGVLP 209 (336)
Q Consensus 142 ~~~r~l~G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~----~-------~w~~~~~~~~~~ 209 (336)
++.-++..++.........++.+|..+ +++|.+..++...+..+|..+++.+... . +|+....+.+++
T Consensus 113 ~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii 192 (460)
T PRK11462 113 AITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVV 192 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 556667788888888888899999997 7999999999888888877666554321 1 466666666665
Q ss_pred HHHHHH
Q 019729 210 CTLLIP 215 (336)
Q Consensus 210 ~~~~~~ 215 (336)
.+++.+
T Consensus 193 ~~i~~~ 198 (460)
T PRK11462 193 AFMMLA 198 (460)
T ss_pred HHHHHH
Confidence 555443
No 178
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.17 E-value=2.6e-09 Score=93.86 Aligned_cols=126 Identities=15% Similarity=0.061 Sum_probs=99.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhH
Q 019729 80 LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTV 159 (336)
Q Consensus 80 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 159 (336)
+|+++++.+...+.+..+..+|.++.+++.||+|+|+.+.++..+..++.++....++... ...-++.|++.+..+|..
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~ 251 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTI 251 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999999999999999998888888777766655554332 345668899999999999
Q ss_pred hHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHH
Q 019729 160 PVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVL 208 (336)
Q Consensus 160 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~ 208 (336)
.+...+..|+ +.+.+.++. ....+|.+++|.+.+.+ |.+..+++..+
T Consensus 252 ~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 252 FSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 9999998875 355666665 45668889898876655 56666664333
No 179
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.16 E-value=3e-09 Score=97.24 Aligned_cols=137 Identities=12% Similarity=0.177 Sum_probs=105.3
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh-----cchhHHHHHHHHHHH
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS-----KDSSFLFMGRLLEGF 150 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~ 150 (336)
+.+++|.++.+.++......++..++.++.|+++||+|+|+.+.++.++.+++.++..+. .+.+.+++..++.|+
T Consensus 242 ~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~ 321 (406)
T PRK15402 242 LISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAF 321 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 456789999888988888888899999999999999999999998888777776666543 245566778888999
Q ss_pred HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHH
Q 019729 151 GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLL 213 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~ 213 (336)
+.+...+......... ++++|++..+.++....+|..+|+.+++.+ ++....+...+..++.
T Consensus 322 g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 322 GIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 9888777766655444 458999999999999999999998888766 4444444444343333
No 180
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.16 E-value=4.5e-10 Score=102.82 Aligned_cols=142 Identities=11% Similarity=0.086 Sum_probs=96.7
Q ss_pred cchhhHhHhhhc--cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHH-HHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 019729 69 SSPTQAEIISDL--KLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGS-LMIAAVPNIIGWLIISFSKDSSFLFMGR 145 (336)
Q Consensus 69 ~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~r 145 (336)
+....|.+.+++ |.+..+.+.+.+...++..++.++.|+++||++||+. +....++.+++.++....++....+++-
T Consensus 261 ~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (412)
T TIGR02332 261 INIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGI 340 (412)
T ss_pred HHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 334566666664 6677888999999999999999999999999997774 3334434444333222222322222222
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHH
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPC 210 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~ 210 (336)
.+.+++.....+.......|.+|+++|+++.|+.+....+|.+++|.+.+.+ +|++.+++.++..
T Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 341 IMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 2333333333344455557889999999999999999999999999887654 5888887766544
No 181
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.16 E-value=4.6e-09 Score=95.62 Aligned_cols=140 Identities=9% Similarity=0.068 Sum_probs=105.8
Q ss_pred hHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHh
Q 019729 73 QAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGV 152 (336)
Q Consensus 73 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 152 (336)
.|.+.+++|++..+.+.+.+...++..++.++.+++.||.+++..+....+......++....++.+.+.+..++.|++.
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~ 319 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTF 319 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 46677788999999999999999999999999999999965444344333334444455455667777778889999999
Q ss_pred hhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHH
Q 019729 153 GVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLL 213 (336)
Q Consensus 153 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~ 213 (336)
+...+...+++.+..| +++++..+.......+|..+|+.+++.+ |++..++.++...++.
T Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 320 ALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 9999989989999887 5566777777777778888888777665 7777777766554433
No 182
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.14 E-value=3.9e-10 Score=100.57 Aligned_cols=123 Identities=21% Similarity=0.319 Sum_probs=105.1
Q ss_pred cchhhHhH-hhhccCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh---cchhHHHH
Q 019729 69 SSPTQAEI-ISDLKLT-ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---KDSSFLFM 143 (336)
Q Consensus 69 ~~~~~~~~-~~~~g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~ 143 (336)
.....|.+ .+++|.+ ..+.+++.++..++..++.++.|++.||+|+|+.+.+......++.+...+. ++....+.
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (352)
T PF07690_consen 225 FSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLII 304 (352)
T ss_dssp HHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHH
T ss_pred hhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 34456655 7889999 7889999999999999999999999999999888777777776666655543 34566777
Q ss_pred HHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHH
Q 019729 144 GRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAY 191 (336)
Q Consensus 144 ~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 191 (336)
.-++.|++.+...+....++.|.+|+++|+++.|+.+....+|..++|
T Consensus 305 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 305 ALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 888899999999999999999999999999999999999999999987
No 183
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.14 E-value=1e-09 Score=98.36 Aligned_cols=113 Identities=12% Similarity=0.203 Sum_probs=93.2
Q ss_pred hhHhHhhhccCCchhHHHHHHHHH-HHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh-----------cchh
Q 019729 72 TQAEIISDLKLTISEFSIFGSLAN-VGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS-----------KDSS 139 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----------~~~~ 139 (336)
..|.+.+++|.+.++.+.+.++.. ++..++.+++|++.||+|||+.+.++.++.+++..+..+. ++.+
T Consensus 231 ~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (356)
T TIGR00901 231 LTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLL 310 (356)
T ss_pred HHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHH
Confidence 445555568999999988887665 6788999999999999999999988888887776655442 3456
Q ss_pred HHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHH
Q 019729 140 FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVT 184 (336)
Q Consensus 140 ~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 184 (336)
.+..+.++.+++.+...+...+++.|.+|+++||+..++.+...+
T Consensus 311 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 311 MLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 677778899999999999999999999999999999999877654
No 184
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.14 E-value=3.2e-09 Score=96.81 Aligned_cols=145 Identities=13% Similarity=0.083 Sum_probs=110.7
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAE-YIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF 150 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 150 (336)
..|.+.++.+.++.+.+++.++..++...+..+.+++.| |++.++.+..+.++.+++.++.+..++.+.+.+..++.|+
T Consensus 230 ~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 309 (400)
T PRK11646 230 MLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYI 309 (400)
T ss_pred hhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 345555665557778888888887777766666666665 5676777778888888888888888888777777888899
Q ss_pred HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc---h-----hHHHHHHhHHHHHHHHHH
Q 019729 151 GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---N-----WRVLAVLGVLPCTLLIPG 216 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~-----w~~~~~~~~~~~~~~~~~ 216 (336)
+.+...+...+++.+..|+++|++..|+.+....+|..+||.+++.+ + ....++..++..++..+.
T Consensus 310 g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 310 GSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999999999999999988776 1 134445545555555443
No 185
>PRK09848 glucuronide transporter; Provisional
Probab=99.13 E-value=2.9e-09 Score=98.63 Aligned_cols=123 Identities=10% Similarity=0.181 Sum_probs=83.8
Q ss_pred HhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh----chhHHH-HHHHHHHHHHHHHHHhhc-----c--hhHH
Q 019729 74 AEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI----GRKGSL-MIAAVPNIIGWLIISFSK-----D--SSFL 141 (336)
Q Consensus 74 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----Grr~~l-~~~~~~~~~~~~~~~~~~-----~--~~~~ 141 (336)
..+.+..|++..++|.+.++..+...+..++.|+++||. ||||.. .++.+...+..++....+ + ...+
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 456777899999999999999999999999999999996 777755 555554544444332111 1 1223
Q ss_pred HHHHHHHHHHhhhhhhhHhHHHHhccCC-CcchhHHhHHHHH-----HHHHHHHHHHhhcc
Q 019729 142 FMGRLLEGFGVGVISYTVPVYIAEIAPQ-NMRGSLGSVNQLS-----VTIGIMLAYLLGLF 196 (336)
Q Consensus 142 ~~~r~l~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~-----~~~g~~~~~~~~~~ 196 (336)
+...++.+++.+...+...++..+..+. ++|....+.-..+ ..++..++|.++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445677888888887777777777654 6788776654433 33455566666543
No 186
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.13 E-value=3.1e-09 Score=95.61 Aligned_cols=148 Identities=12% Similarity=0.090 Sum_probs=100.0
Q ss_pred hhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhch---hHHHHH-HHHHHHHHHHHHHhhcchhHHHHHHH
Q 019729 71 PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGR---KGSLMI-AAVPNIIGWLIISFSKDSSFLFMGRL 146 (336)
Q Consensus 71 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr---r~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~r~ 146 (336)
..+|.+.++.|.+.. .+...++..+...++ .++++||..| |+.... ..++.+++....++..+....++.-.
T Consensus 213 ~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 288 (368)
T TIGR00903 213 IWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIG 288 (368)
T ss_pred HHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 356666677787754 566655555555555 4677777654 343332 34444444444455555544455566
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc--hhHHHHHHhHHHHHHHHHHhhcccC
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV--NWRVLAVLGVLPCTLLIPGLFFIPE 222 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~~~~e 222 (336)
+.|++....++...++.+|.+|++.|+++.|+.+....+|++++|.+.+.+ +-+..|.+.+++.+++.+..+.+++
T Consensus 289 l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 289 IAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred HHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 777777778888889999999999999999999999999998888777543 6666777777776666555444454
No 187
>PRK09848 glucuronide transporter; Provisional
Probab=99.12 E-value=9.7e-09 Score=95.14 Aligned_cols=120 Identities=17% Similarity=0.148 Sum_probs=94.9
Q ss_pred hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHhhh
Q 019729 77 ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK--DSSFLFMGRLLEGFGVGV 154 (336)
Q Consensus 77 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~ 154 (336)
++.+|.+....++......++..++.++.+++.||+|+|+.+.++.++.+++.++..+.+ +.+.+++..++.|+|.+.
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~ 335 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGV 335 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence 445676655555545555677888999999999999999999999988888877776644 456666778889999999
Q ss_pred hhhhHhHHHHhccCCC-------cchhHHhHHHHHHHHHHHHHHHhhcc
Q 019729 155 ISYTVPVYIAEIAPQN-------MRGSLGSVNQLSVTIGIMLAYLLGLF 196 (336)
Q Consensus 155 ~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~ 196 (336)
..+...++.+|..|.+ ++|...++.+....+|..+++.+.+.
T Consensus 336 ~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 336 TMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988754 45888899999888888888777643
No 188
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.12 E-value=4.1e-09 Score=95.50 Aligned_cols=144 Identities=11% Similarity=0.183 Sum_probs=102.8
Q ss_pred hHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHH
Q 019729 73 QAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF-SKDSSFLFMGRLLEGFG 151 (336)
Q Consensus 73 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~ 151 (336)
.|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+..++..++.+++
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g 302 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAG 302 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34466668999999999999999999999999999999999999999888887777765543 44555556666666666
Q ss_pred hhhhhhhHh-HHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHHHHHHhh
Q 019729 152 VGVISYTVP-VYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLF 218 (336)
Q Consensus 152 ~g~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~ 218 (336)
.+...+... ....+..+++.++.. ..+....+|..+||.+++.+ +|++.+.+.++.+++.+....
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 303 LFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 554444433 344444444444443 34566778888888877654 688888887776666544433
No 189
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.11 E-value=1.6e-09 Score=111.75 Aligned_cols=134 Identities=12% Similarity=0.039 Sum_probs=109.1
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh--------------------
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS-------------------- 135 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------------------- 135 (336)
+.+.+|.+....+++.++..++.+++.++.|+++|+.++++.+..+.++.+++.+.+++.
T Consensus 252 ~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 331 (1140)
T PRK06814 252 AKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSK 331 (1140)
T ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcc
Confidence 455689999999999999999999999999999999887777666666665555544442
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHH
Q 019729 136 KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLP 209 (336)
Q Consensus 136 ~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~ 209 (336)
++.+.+++..++.|++.+...+...+++.+.+|++.||+++|..+....+|..+++.+.+.+ ++...+++.+++
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 332 RHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 56677778889999999999999999999999999999999999999999998888887655 445555544443
No 190
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.11 E-value=1.9e-09 Score=100.84 Aligned_cols=126 Identities=13% Similarity=0.165 Sum_probs=107.2
Q ss_pred hhHhH-hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh--h--cchhHHHHHHH
Q 019729 72 TQAEI-ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF--S--KDSSFLFMGRL 146 (336)
Q Consensus 72 ~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~--~~~~~~~~~r~ 146 (336)
..|.+ ++.+|.++.+.+++.....++..++.++.|++.||+|||+.+.++..+.+++.++..+ . .+++.+....+
T Consensus 277 ~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (485)
T TIGR00711 277 LLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQF 356 (485)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHH
Confidence 34444 4558999999999999999999999999999999999999999998888888877663 2 34556667788
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
+.|++.+...+.......+..|+++|+.+.++.+....+|..+|+.+.+.+
T Consensus 357 l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~ 407 (485)
T TIGR00711 357 IRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTI 407 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988888888888889999999999999999999999998887665
No 191
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.09 E-value=2.4e-09 Score=99.71 Aligned_cols=149 Identities=15% Similarity=0.105 Sum_probs=100.7
Q ss_pred hhHhH-hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHH--------HHHHHHH--HHHHHHHHh-hcchh
Q 019729 72 TQAEI-ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSL--------MIAAVPN--IIGWLIISF-SKDSS 139 (336)
Q Consensus 72 ~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l--------~~~~~~~--~~~~~~~~~-~~~~~ 139 (336)
.+|.+ .+.+|.+..+.+++.++..++..++.++.|+++||+++|+.. ..+.... ++..+.... ..+..
T Consensus 283 ~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (465)
T TIGR00894 283 YLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFY 362 (465)
T ss_pred HHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchH
Confidence 44544 566899999999999999999999999999999998765321 1111111 111111222 22333
Q ss_pred HHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-------hhHHHHHHhHHHHHH
Q 019729 140 FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-------NWRVLAVLGVLPCTL 212 (336)
Q Consensus 140 ~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-------~w~~~~~~~~~~~~~ 212 (336)
..++.-.+.+.+.+...+.......|..| +.+|...++.+....+|++++|.+.+.+ +|+..|++.++..++
T Consensus 363 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i 441 (465)
T TIGR00894 363 LTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNIL 441 (465)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHH
Confidence 44444455555555555555555667776 5899999999999999999999888754 388888888877777
Q ss_pred HHHHhhccc
Q 019729 213 LIPGLFFIP 221 (336)
Q Consensus 213 ~~~~~~~~~ 221 (336)
..+...+++
T Consensus 442 ~~i~~~~~~ 450 (465)
T TIGR00894 442 CVIFYLIFG 450 (465)
T ss_pred HHHHeeeee
Confidence 766555443
No 192
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.08 E-value=7.9e-09 Score=93.95 Aligned_cols=131 Identities=14% Similarity=0.145 Sum_probs=92.3
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVI 155 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 155 (336)
+.+++|.+..+.+.+.+...++..++.++.+++.||+|||+.+.++..+..++.+...+.++.+..+..-.+.+.+.+..
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 309 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVG 309 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999888888877777665544444444444444443
Q ss_pred hhhHhHHHHhccCCCcc-hhHHhHHHHHHHHHHHHHHHhhccchhHHHHHHhHH
Q 019729 156 SYTVPVYIAEIAPQNMR-GSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVL 208 (336)
Q Consensus 156 ~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~~~~~~~w~~~~~~~~~ 208 (336)
.+. ....+..|.++| +.+.++...+..+|..+++.+.+.+++.......+.
T Consensus 310 ~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 310 FGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGI 361 (392)
T ss_pred hHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 333 233445554444 455556666667777777777777676554444443
No 193
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.08 E-value=1.9e-08 Score=90.89 Aligned_cols=119 Identities=20% Similarity=0.148 Sum_probs=86.2
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH---Hhh-cchhHHHHHHHHHHHH
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLII---SFS-KDSSFLFMGRLLEGFG 151 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~r~l~G~~ 151 (336)
+.+++|.++.+.+++.++..++..++.++.|++.||+|||+.+..+..+..+..+.. ... .+.+.+.++-.+.+.+
T Consensus 221 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (377)
T PRK11102 221 YIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGC 300 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 556789999999999999999999999999999999999999988876654433222 222 2344444444445555
Q ss_pred hhhhhhhHhHHHHhccCCCcchhHHhHHHH-HHHHHHHHHHHhhc
Q 019729 152 VGVISYTVPVYIAEIAPQNMRGSLGSVNQL-SVTIGIMLAYLLGL 195 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~ 195 (336)
.+...+....++.|..| ++|+.+.+..+. ...+|..+++.++.
T Consensus 301 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 301 VSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55555666667778776 889999998654 35677778777754
No 194
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.08 E-value=3.2e-09 Score=88.47 Aligned_cols=143 Identities=13% Similarity=0.074 Sum_probs=109.0
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHH-HHhhcchhHHHHHHHHHHHHhhh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLI-ISFSKDSSFLFMGRLLEGFGVGV 154 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~r~l~G~~~g~ 154 (336)
+++.+|+|+..++.+.+......++.+++.|.++||+|++...+.+..+..+..-. ..++ .+.=.+...++|+....
T Consensus 291 F~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsysl 368 (459)
T KOG4686|consen 291 FQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYSL 368 (459)
T ss_pred HHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHHH
Confidence 68899999999999999999999999999999999999998888776665544432 2222 12223456677887766
Q ss_pred hhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----h--h-HHHHHHhHHHHHHHHHHhhcc
Q 019729 155 ISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----N--W-RVLAVLGVLPCTLLIPGLFFI 220 (336)
Q Consensus 155 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~--w-~~~~~~~~~~~~~~~~~~~~~ 220 (336)
.-...+..++...|.++-|++.|..+...++|-.+-|++++.+ + | +..|.+.+.+++....+++.+
T Consensus 369 lAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 369 LACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 6556778888899999999999999999999999999998776 1 3 355555666666665554444
No 195
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.05 E-value=5e-09 Score=98.26 Aligned_cols=122 Identities=12% Similarity=0.089 Sum_probs=106.3
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh---cchhHHHHHHHHHHHHh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---KDSSFLFMGRLLEGFGV 152 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~ 152 (336)
++..+|.++.+.+.......++..++.++.|++.||+|+|+.+..+.++.+++.++.... ++.+...+..++.|++.
T Consensus 286 lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~ 365 (495)
T PRK14995 286 LQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSA 365 (495)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhH
Confidence 456689999999999999999999999999999999999999988888887777655432 35555667788999999
Q ss_pred hhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 153 GVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 153 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
|...+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+
T Consensus 366 g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 366 ASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred HHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998999999999999999999999999999999999887765
No 196
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.05 E-value=1.5e-09 Score=95.46 Aligned_cols=143 Identities=12% Similarity=0.019 Sum_probs=107.9
Q ss_pred hHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc-------chhHHHHHHHH
Q 019729 75 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK-------DSSFLFMGRLL 147 (336)
Q Consensus 75 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~r~l 147 (336)
.+++++|.++.+.+.+...+.+...+..+.+|+++||+|.+|++......++++..+.++.+ +...+++.-+.
T Consensus 244 ~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 323 (417)
T COG2223 244 YLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLA 323 (417)
T ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999888888888877653 33333333333
Q ss_pred HHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHHHHHHhh
Q 019729 148 EGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLF 218 (336)
Q Consensus 148 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~ 218 (336)
.++..|........++..++| ++-|...|+.....++|++.-|..-+.. .++..|++...+.+++.+..+
T Consensus 324 l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 324 LFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred HHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 444444444445556666665 4789999999999999987776665443 488888888777777765433
No 197
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.05 E-value=5.8e-09 Score=93.52 Aligned_cols=125 Identities=14% Similarity=0.098 Sum_probs=98.6
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-chhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI-GRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF 150 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 150 (336)
..|.+.++.|.+..+.+.+.++..++..+++++.|++.||+ +||+.+..+.++.+++.+.+.+.++..... .-++.|+
T Consensus 219 ~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~ 297 (355)
T TIGR00896 219 WLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGL 297 (355)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHH
Confidence 45666677899999999999999999999999999999999 567777777777777777666655433322 4567899
Q ss_pred HhhhhhhhHhHHHHhccC-CCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 151 GVGVISYTVPVYIAEIAP-QNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
+.|..++...+.+.+..+ +++++...++.+....+|..++|.+.+.+
T Consensus 298 ~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l 345 (355)
T TIGR00896 298 GQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVL 345 (355)
T ss_pred hhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988887777765554 56678888988888888888898887665
No 198
>PRK10133 L-fucose transporter; Provisional
Probab=99.03 E-value=2.6e-08 Score=91.92 Aligned_cols=133 Identities=13% Similarity=-0.028 Sum_probs=101.7
Q ss_pred hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhh
Q 019729 77 ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVIS 156 (336)
Q Consensus 77 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~ 156 (336)
++.+|.++.+.++....+.++..++.++.+++.||+|+|+++..+.++.+++.++..+.++.. .+..-.+.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999988888777776666655542 3456678999999999
Q ss_pred hhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----h-hHHHHHHhHHHHHH
Q 019729 157 YTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----N-WRVLAVLGVLPCTL 212 (336)
Q Consensus 157 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~-w~~~~~~~~~~~~~ 212 (336)
|...+...+..|+ +.+.+.++..... +|..++|.+.+.+ | -|..|++..+..+.
T Consensus 366 P~~~s~a~~~~~~-~~~~as~l~~~~~-~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 366 PTIFSLGIKNLGQ-DTKYGSSFIVMTI-IGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV 424 (438)
T ss_pred HHHHHHHHcccch-hhccchhHHhHHh-ccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 9999999999875 4667777765433 5666666665544 4 45666554444333
No 199
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.03 E-value=2.8e-08 Score=92.65 Aligned_cols=121 Identities=12% Similarity=0.117 Sum_probs=90.1
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh-----hcchhHHHHHHHHHHH
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF-----SKDSSFLFMGRLLEGF 150 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~G~ 150 (336)
+.+...-+.+..+++.++..++.+++.+++++++||+|+|+.+.++..+.+++.+...+ ..+.+.+++.-++.|+
T Consensus 257 ~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~ 336 (473)
T PRK10429 257 YFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNI 336 (473)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHH
Confidence 33333334556677777777899999999999999999999999888776666554432 2345666777788999
Q ss_pred HhhhhhhhHhHHHHhccC-------CCcchhHHhHHHHHHHHHHHHHHHhhcc
Q 019729 151 GVGVISYTVPVYIAEIAP-------QNMRGSLGSVNQLSVTIGIMLAYLLGLF 196 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 196 (336)
+.+...+...++++|..+ .+..|...+......-+|..+++.+.+.
T Consensus 337 ~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 337 GTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999965 3334557777877777888777776644
No 200
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.02 E-value=2.2e-09 Score=97.11 Aligned_cols=149 Identities=18% Similarity=0.169 Sum_probs=113.5
Q ss_pred hHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----hch-hHHHHHHHHHHHHHHHHHHhhcc------hhHHHH
Q 019729 75 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEY----IGR-KGSLMIAAVPNIIGWLIISFSKD------SSFLFM 143 (336)
Q Consensus 75 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~~~~~ 143 (336)
.+.+..|+++..+|.+..+.-+.-++.-|+.|.++|| +|| |+.++++.+..++.+.++-.+++ ....++
T Consensus 38 fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 38 FYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV 117 (467)
T ss_pred HHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence 3677789999999999999999999999999999996 686 45566777888888888887763 344566
Q ss_pred HHHHHHHHhhhhhhhHhHHHHhccC-CCcchhHHhHHHHHHHHHHHHHHHhhcc-----------chhHHHHHHhHHHHH
Q 019729 144 GRLLEGFGVGVISYTVPVYIAEIAP-QNMRGSLGSVNQLSVTIGIMLAYLLGLF-----------VNWRVLAVLGVLPCT 211 (336)
Q Consensus 144 ~r~l~G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~-----------~~w~~~~~~~~~~~~ 211 (336)
.-.+.+++......+..++.+|+.+ +++|.+..++-..+..+|.++...+... .||+...++.+++.+
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~ 197 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV 197 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 6788889988888888999999985 5899999999888888886655443321 267777777666666
Q ss_pred HHHHH-hhcccCc
Q 019729 212 LLIPG-LFFIPES 223 (336)
Q Consensus 212 ~~~~~-~~~~~e~ 223 (336)
+..+. ++-++|.
T Consensus 198 i~~l~~~~~v~ER 210 (467)
T COG2211 198 ILLLFCFFNVKER 210 (467)
T ss_pred HHHHHHHHHhhcc
Confidence 55443 3334553
No 201
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.01 E-value=1.2e-08 Score=92.90 Aligned_cols=138 Identities=14% Similarity=0.087 Sum_probs=105.8
Q ss_pred hHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhh
Q 019729 75 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGV 154 (336)
Q Consensus 75 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~ 154 (336)
.+++.+|.++.+.|++.+...++..+++++.+++.||+++|+++..+.. .++..+..++.++++..++..++.|++.+.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~ 309 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGF 309 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 3556789999999999999999999999999999999999988887753 344444555666777677778889999888
Q ss_pred hhhhHhHHHHhccCCCc-chhHHhHHHHHHHHHHHHHHHhhccc---hhHHHHHHhHHHHHHH
Q 019729 155 ISYTVPVYIAEIAPQNM-RGSLGSVNQLSVTIGIMLAYLLGLFV---NWRVLAVLGVLPCTLL 213 (336)
Q Consensus 155 ~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~ 213 (336)
..+...+.+.+..|++. +|++.++.+....+|..++..+.+.+ +-+..+++.+...++.
T Consensus 310 ~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (393)
T PRK11195 310 FVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLVA 372 (393)
T ss_pred hhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 88888888888766554 79999999999999988888777644 4344444433333333
No 202
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.01 E-value=1.4e-08 Score=93.50 Aligned_cols=125 Identities=22% Similarity=0.255 Sum_probs=103.7
Q ss_pred hhhHhHhhh-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHH
Q 019729 71 PTQAEIISD-LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK--DSSFLFMGRLL 147 (336)
Q Consensus 71 ~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l 147 (336)
...+.+.++ +|.+ +..+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++..+.+ +.+.+++.-++
T Consensus 246 ~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 324 (428)
T PF13347_consen 246 TFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFIL 324 (428)
T ss_pred hHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 344444444 4544 5678888899999999999999999999999999999999999998888875 88999999999
Q ss_pred HHHHhhhhhhhHhHHHHhccCC-------CcchhHHhHHHHHHHHHHHHHHHhhcc
Q 019729 148 EGFGVGVISYTVPVYIAEIAPQ-------NMRGSLGSVNQLSVTIGIMLAYLLGLF 196 (336)
Q Consensus 148 ~G~~~g~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~ 196 (336)
.|++.+..++...++++|..+. ++.|...+..+....+|..+++.+.+.
T Consensus 325 ~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~ 380 (428)
T PF13347_consen 325 AGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGL 380 (428)
T ss_pred hHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999973 334778888888888887777776643
No 203
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.96 E-value=2.6e-07 Score=85.55 Aligned_cols=139 Identities=19% Similarity=0.303 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHH-HHHHHHHHHHHHhh-cc-hhHHHHHHHHHHHHhhhhhhhHhHHH
Q 019729 87 FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIA-AVPNIIGWLIISFS-KD-SSFLFMGRLLEGFGVGVISYTVPVYI 163 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~-~~~~~~~~~~~~~~-~~-~~~~~~~r~l~G~~~g~~~~~~~~~~ 163 (336)
.++..++..+...+..|+.|-++|+-|+||.++.. ..+..++++++.+. ++ ++...+.-++.-++.+.......+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56788899999999999999999999976665544 44445566666653 33 33444445555567888888899999
Q ss_pred HhccCCCcc--------------------------hhHHhHHHHHHHHHHHHHHHhhccc------------hhHHHHHH
Q 019729 164 AEIAPQNMR--------------------------GSLGSVNQLSVTIGIMLAYLLGLFV------------NWRVLAVL 205 (336)
Q Consensus 164 ~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~~------------~w~~~~~~ 205 (336)
.|+.+++.+ ++..+.-...+.+|+++...+.-.+ +-|..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 999999988 8888887777778877766654222 24777777
Q ss_pred hHHHHHHH-HHHhhcccCchh
Q 019729 206 GVLPCTLL-IPGLFFIPESPR 225 (336)
Q Consensus 206 ~~~~~~~~-~~~~~~~~e~~~ 225 (336)
.++..++. +...+++||.|+
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCC
Confidence 77765554 445667787754
No 204
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.95 E-value=1.1e-07 Score=86.43 Aligned_cols=122 Identities=20% Similarity=0.110 Sum_probs=93.4
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHH-HHHHHHHHHh--hcchhHHHHHHHHHHHHh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVP-NIIGWLIISF--SKDSSFLFMGRLLEGFGV 152 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~-~~~~~~~~~~--~~~~~~~~~~r~l~G~~~ 152 (336)
+.+.+|.+..+.+++.....++..++.++.+++.||+|++......... ..+....... ..+.+.+++..++.|++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 4455899999999999888999999999999999999854433322222 2222222222 234566777789999999
Q ss_pred hhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccch
Q 019729 153 GVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN 198 (336)
Q Consensus 153 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 198 (336)
+...+...++..|.+| ++++...++.+....+|..+++.+++.+.
T Consensus 314 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 314 GMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999887 67899999999999999999999987774
No 205
>PRK09669 putative symporter YagG; Provisional
Probab=98.94 E-value=1e-07 Score=88.17 Aligned_cols=113 Identities=14% Similarity=0.183 Sum_probs=85.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh--hcchhHHHHHHHHHHHHhhhhhhhHhHH
Q 019729 85 SEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF--SKDSSFLFMGRLLEGFGVGVISYTVPVY 162 (336)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~g~~~~~~~~~ 162 (336)
+..+.+.....+...++.+++++++||+|+|+.+.++.++.++..+...+ .++.+.+++..++.|++.+...+...++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777888899999999999999999999887766644433222 3456667778889999999999999999
Q ss_pred HHhccCC-------CcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 163 IAEIAPQ-------NMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 163 ~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
++|..+. +..|...+..+....+|..+++.+++.+
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998862 2335567778777788888887776543
No 206
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.93 E-value=5.4e-08 Score=84.34 Aligned_cols=148 Identities=24% Similarity=0.423 Sum_probs=117.4
Q ss_pred ccccccchhhHhHhhhccCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcc--hh
Q 019729 64 FTCGYSSPTQAEIISDLKLTI--SEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKD--SS 139 (336)
Q Consensus 64 ~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~ 139 (336)
+.........+.+..+++.+. ...++..+...++..++.++.|.+.||+|||+.+..+.....++.+.+++..+ .+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (338)
T COG0477 16 LDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLA 95 (338)
T ss_pred HhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHH
Confidence 344445556666777777665 47899999999999999999999999999998888888766666667777666 88
Q ss_pred HHHHHHHHHHHHhhhhhhhHhHHHHhccCC-CcchhHHhHHHH-HHHHHHHHHHHhhccc------hhHHHHHHhHHHHH
Q 019729 140 FLFMGRLLEGFGVGVISYTVPVYIAEIAPQ-NMRGSLGSVNQL-SVTIGIMLAYLLGLFV------NWRVLAVLGVLPCT 211 (336)
Q Consensus 140 ~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~~ 211 (336)
.+++.|++.|++.+...+...+++.|++|. ++|+...+.... ...+|..+++.++..+ +||..+........
T Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 96 LLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGL 175 (338)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 889999999999999999999999999997 678888888777 5777888887666433 68886666555443
No 207
>PRK11043 putative transporter; Provisional
Probab=98.93 E-value=2.4e-07 Score=84.47 Aligned_cols=125 Identities=14% Similarity=0.056 Sum_probs=95.2
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH---Hh--hcchhHHHHHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLII---SF--SKDSSFLFMGRL 146 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~--~~~~~~~~~~r~ 146 (336)
..|.+.+++|.+..+.++......++..++.++.+++.||+|+|+.+....+..+++.+.. .. .++...+++...
T Consensus 225 ~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (401)
T PRK11043 225 GSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFC 304 (401)
T ss_pred HhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHH
Confidence 3455667789999999988888888999999999999999999987766555544443322 22 234555556677
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
+.|++.+..++.......+..| ++|+++.++++.....+...++.+.+.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l 354 (401)
T PRK11043 305 VMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8888888888988888878776 6899999999988777777777777655
No 208
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.92 E-value=3.8e-08 Score=86.46 Aligned_cols=87 Identities=14% Similarity=0.115 Sum_probs=72.3
Q ss_pred HhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc----------------
Q 019729 133 SFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF---------------- 196 (336)
Q Consensus 133 ~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~---------------- 196 (336)
+...+++.+++.-++.|.|.+...+..+.++++..|++++++.+++.+..+++|.+++|.+++.
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 3456899999999999999999999999999999999999999999999999999999999863
Q ss_pred ----chhHHHHHHhHHHHHHHHHHhhc
Q 019729 197 ----VNWRVLAVLGVLPCTLLIPGLFF 219 (336)
Q Consensus 197 ----~~w~~~~~~~~~~~~~~~~~~~~ 219 (336)
.+|+++|++.+.+.++..+.+.+
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~ 111 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAF 111 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 25888888665554444333333
No 209
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.90 E-value=2.8e-08 Score=92.37 Aligned_cols=146 Identities=14% Similarity=0.139 Sum_probs=116.2
Q ss_pred hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh----------cchhHHHHHHH
Q 019729 77 ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS----------KDSSFLFMGRL 146 (336)
Q Consensus 77 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~ 146 (336)
.+.+|.++.+.|.+.....++.+++....+++.+|++.|+++.++.++.+++.+..... ++.+.++..-+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 35689999999999999999999999999999999999999999999998877554311 33334555678
Q ss_pred HHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----h-----hHHH---HHHhHHHHHHHH
Q 019729 147 LEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----N-----WRVL---AVLGVLPCTLLI 214 (336)
Q Consensus 147 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~-----w~~~---~~~~~~~~~~~~ 214 (336)
+.+++.+..+.+...++.+..|++.+++..++.+...++|..+++.+++.+ | ++.. ..++.++.++.+
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l 439 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPL 439 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999877655 3 3322 223444455555
Q ss_pred HHhhcccC
Q 019729 215 PGLFFIPE 222 (336)
Q Consensus 215 ~~~~~~~e 222 (336)
...+++|+
T Consensus 440 ~~~~llP~ 447 (468)
T TIGR00788 440 PLLHLLPR 447 (468)
T ss_pred HHHHhCCC
Confidence 55567785
No 210
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.89 E-value=1.8e-08 Score=92.34 Aligned_cols=166 Identities=19% Similarity=0.259 Sum_probs=117.4
Q ss_pred HHHhhhhhhccccccchhhHhHhhhccCCchh-HHHHHH----HHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHH
Q 019729 55 VALGPIQFGFTCGYSSPTQAEIISDLKLTISE-FSIFGS----LANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGW 129 (336)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~~~~~~----~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 129 (336)
..+-.+..++......+..+......+.+... .+.... ...+...+.++..|.++||+|||..+.+..+...+..
T Consensus 27 ~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~ 106 (463)
T KOG2816|consen 27 LFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPA 106 (463)
T ss_pred HHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhH
Confidence 33334444455444445554444444433222 222333 3467888999999999999999999999998888888
Q ss_pred HHHHhhcchhHHHHHHHHHHH--HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHH
Q 019729 130 LIISFSKDSSFLFMGRLLEGF--GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLA 203 (336)
Q Consensus 130 ~~~~~~~~~~~~~~~r~l~G~--~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~ 203 (336)
+...+.. +|. ++ +.|+ +.+.......++++|....++|....|+.+.....+..++|.+++.+ +.-..+
T Consensus 107 ~~~~~~~-~~~-~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f 181 (463)
T KOG2816|consen 107 LCLLFQG-YWF-FL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVF 181 (463)
T ss_pred HHHHHHH-HHH-hh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHH
Confidence 7777765 333 33 3333 23456777889999999999999999999999999999999988776 566778
Q ss_pred HHhHHHHHHHHH-HhhcccCchh
Q 019729 204 VLGVLPCTLLIP-GLFFIPESPR 225 (336)
Q Consensus 204 ~~~~~~~~~~~~-~~~~~~e~~~ 225 (336)
.+..+..++..+ .++++||+-.
T Consensus 182 ~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 182 LIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred HHHHHHHHHHHHHHhhccccccC
Confidence 887777777755 4567888743
No 211
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.89 E-value=3.8e-08 Score=90.14 Aligned_cols=129 Identities=9% Similarity=-0.109 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh-hc-----chhHHHHHHHHHHHHhhhhhhhHhH
Q 019729 88 SIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF-SK-----DSSFLFMGRLLEGFGVGVISYTVPV 161 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~-----~~~~~~~~r~l~G~~~g~~~~~~~~ 161 (336)
.....+..+...+..+++|+++||+|+|+++.++.+...++...... .+ +.+.+.+..+...++.|........
T Consensus 289 l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk 368 (462)
T PRK15034 289 LRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQ 368 (462)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHH
Confidence 33344556788899999999999999999999888877766643222 22 3455555444444555555566666
Q ss_pred HHHhccCC---------------------CcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHHHHH
Q 019729 162 YIAEIAPQ---------------------NMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 162 ~~~~~~~~---------------------~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~ 215 (336)
++.+++|+ ++-|.+.|+......+|+++-|.+-+.. ++...|+...++.+++++
T Consensus 369 ~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 448 (462)
T PRK15034 369 MIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVL 448 (462)
T ss_pred hhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 77777764 1456778888888888888888554332 466777777776666654
Q ss_pred H
Q 019729 216 G 216 (336)
Q Consensus 216 ~ 216 (336)
+
T Consensus 449 ~ 449 (462)
T PRK15034 449 L 449 (462)
T ss_pred H
Confidence 4
No 212
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.87 E-value=4.4e-07 Score=86.95 Aligned_cols=146 Identities=12% Similarity=0.166 Sum_probs=115.3
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-hchhHHHHHHHHHHHHHHHHHHhhcc--------hhHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEY-IGRKGSLMIAAVPNIIGWLIISFSKD--------SSFLF 142 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~~~ 142 (336)
....+.+.+|.+.+.+..+...+....-+..+++|+++|+ +||++.+.++.++..++.++.++... ....+
T Consensus 10 LvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l 89 (654)
T TIGR00926 10 LVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDL 89 (654)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHH
Confidence 3344566789998888888888888888999999999997 59999999999999999888776421 12355
Q ss_pred HHHHHHHHHhhhhhhhHhHHHHhccCCCc---chhHHhHHHHHHHHHHHHHHHhhccc-----------hhHHHHHHhHH
Q 019729 143 MGRLLEGFGVGVISYTVPVYIAEIAPQNM---RGSLGSVNQLSVTIGIMLAYLLGLFV-----------NWRVLAVLGVL 208 (336)
Q Consensus 143 ~~r~l~G~~~g~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~~-----------~w~~~~~~~~~ 208 (336)
++-.+.++|.|++-+...+...|.+++++ |.....++..+.++|+++++.+...+ +|...|.+.++
T Consensus 90 ~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i 169 (654)
T TIGR00926 90 LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAI 169 (654)
T ss_pred HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHH
Confidence 66778888999999999999999997643 55677778888889998887776443 48888888887
Q ss_pred HHHHHHHHh
Q 019729 209 PCTLLIPGL 217 (336)
Q Consensus 209 ~~~~~~~~~ 217 (336)
..+++++..
T Consensus 170 ~m~ia~lvf 178 (654)
T TIGR00926 170 LMILALIVF 178 (654)
T ss_pred HHHHHHHHH
Confidence 777765543
No 213
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.82 E-value=1.6e-09 Score=95.99 Aligned_cols=176 Identities=18% Similarity=0.057 Sum_probs=123.7
Q ss_pred HHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHH--------HHHH-HHHHHHHHHHHHHHHHhhhchhHHHHH
Q 019729 50 FCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSI--------FGSL-ANVGAMVGAIASGQIAEYIGRKGSLMI 120 (336)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~--------~~~~-~~~~~~~~~~~~g~l~dr~Grr~~l~~ 120 (336)
.-++..+..+|...+.....+.....+.+.+|+.+.+... ...+ ...+++.|-.+...++|+.|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 3445566667777666666666777788888876554322 1111 122333455666789999999999999
Q ss_pred HHHHHHHHHHHHHhhcc----hhHHHHHHHHHHH-HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhc
Q 019729 121 AAVPNIIGWLIISFSKD----SSFLFMGRLLEGF-GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 195 (336)
Q Consensus 121 ~~~~~~~~~~~~~~~~~----~~~~~~~r~l~G~-~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 195 (336)
+.+++.+..+..+...| ...++++..+..+ +.-+.......+-+|.+|.+.|++..|+.....-.|++++...-.
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 99999999888887655 1222222222222 222333445566789999999999999999999999998866553
Q ss_pred c---------chhHHHHHHhHHHHHHHHHHhhcccCchh
Q 019729 196 F---------VNWRVLAVLGVLPCTLLIPGLFFIPESPR 225 (336)
Q Consensus 196 ~---------~~w~~~~~~~~~~~~~~~~~~~~~~e~~~ 225 (336)
. .+.++.+++.+.+.++..+..+++|||.+
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 3 37789999999999999998899999864
No 214
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.81 E-value=4.1e-07 Score=78.84 Aligned_cols=168 Identities=17% Similarity=0.119 Sum_probs=128.3
Q ss_pred ChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-chhHHHHHHHH
Q 019729 45 SVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI-GRKGSLMIAAV 123 (336)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~ 123 (336)
.+..|.+.+...+..+.++.. ..-+|.+..|.|+|..+.|++.++..+..+..++....+.+|. ++|+..+....
T Consensus 207 ~~~aW~vtLfmGlqS~~~Y~~----~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~ 282 (395)
T COG2807 207 SPLAWQVTLFMGLQSLLYYIV----IGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALL 282 (395)
T ss_pred CchhHHHHHHHHhhHHHHHHH----HHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 344566655555554444332 3457888999999999999999999999999999999999965 67888888888
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCC-cchhHHhHHHHHHHHHHHHHHHhhccc-----
Q 019729 124 PNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQN-MRGSLGSVNQLSVTIGIMLAYLLGLFV----- 197 (336)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~g~~~~~~~~~~~----- 197 (336)
++.++.+.+.+.+....++- -++.|++.|+.++....++.+..+.. +-+...++.+....+=..+||.+.+++
T Consensus 283 ~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 283 LMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred HHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 88888888888765433322 48999999999999999999888654 445566677777777788889998877
Q ss_pred hhHHHHHHhHHHHHHHHHHh
Q 019729 198 NWRVLAVLGVLPCTLLIPGL 217 (336)
Q Consensus 198 ~w~~~~~~~~~~~~~~~~~~ 217 (336)
+|+...+......+...+.-
T Consensus 362 sw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 362 SWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred ChHHHHHHHHHHHHHHHHHH
Confidence 79988877666666554443
No 215
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.80 E-value=2.3e-07 Score=87.01 Aligned_cols=128 Identities=13% Similarity=0.148 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHhhhchhHHHHHHHHHHHHHHHHHHhhcc---------hhHHHHHHHHHHHHhh
Q 019729 87 FSIFGSLANVGAMVGAIAS----GQIAEYIGRKGSLMIAAVPNIIGWLIISFSKD---------SSFLFMGRLLEGFGVG 153 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~----g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~r~l~G~~~g 153 (336)
.+++.++..+...+..++. +++.+|++.++.+.++.++.+++.+..+...+ .++++...++.|++.+
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4666667776666666666 55566666667888999999999888776644 4578889999999999
Q ss_pred hhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc--------------hhHHHHHHhHHHHHHHH
Q 019729 154 VISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV--------------NWRVLAVLGVLPCTLLI 214 (336)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------------~w~~~~~~~~~~~~~~~ 214 (336)
...|...+++.+..|++.||+.+|.+.....+|..++..+.... +..+.|...++.+++..
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a 472 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIA 472 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988888887776665311 25566766665555443
No 216
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.79 E-value=3.5e-07 Score=85.32 Aligned_cols=131 Identities=21% Similarity=0.155 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhch-----hHHH--HHHHHHHHHHHHHHHh---------hcchhHHHHHHHHHHH
Q 019729 87 FSIFGSLANVGAMVGAIASGQIAEYIGR-----KGSL--MIAAVPNIIGWLIISF---------SKDSSFLFMGRLLEGF 150 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-----r~~l--~~~~~~~~~~~~~~~~---------~~~~~~~~~~r~l~G~ 150 (336)
.+++.++..+.-.+.+++..++-.|.+| +... .+|.++.+++.+..++ ..+++++++..++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6788888888888888876654444443 3333 6788888877777664 3588889999999999
Q ss_pred HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHh
Q 019729 151 GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGL 217 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~ 217 (336)
|.....|...+++.+..|++.||+.+|++.....+|..+++.+.... +|...|...++..++..+..
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998887544 67777777666655554433
No 217
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.79 E-value=3.4e-08 Score=67.54 Aligned_cols=80 Identities=14% Similarity=0.167 Sum_probs=74.0
Q ss_pred hhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHH
Q 019729 62 FGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFL 141 (336)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (336)
.|+.+..++|.+|.++++.++|.++.+++.+...+|+++|++...++.++..+++.+..+.+...+..+.+++.++.+.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 45677788899999999999999999999999999999999999999999889999999999999999999999887654
No 218
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.78 E-value=8.8e-07 Score=78.42 Aligned_cols=121 Identities=17% Similarity=0.198 Sum_probs=94.3
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc-----hhHHHHHHH-HHHHHHHHHHHhh-----c--------
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIG-----RKGSLMIAA-VPNIIGWLIISFS-----K-------- 136 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~~~-~~~~~~~~~~~~~-----~-------- 136 (336)
+..|++++..-.+.+.++..+... ..+.+|+.+|+.+ ||..+++.. .+...+..+..++ .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 567899998888888888877765 5899999999999 888777553 4434444333331 2
Q ss_pred ch---hHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 137 DS---SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 137 ~~---~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
.+ ....+...+.|++.+...+...++++|..|+++|+++.++......+|.+++..+.+.+
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~l 148 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRL 148 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 13344577899999999999999999999999999999999999999999988887654
No 219
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.77 E-value=1.2e-06 Score=79.59 Aligned_cols=115 Identities=17% Similarity=0.249 Sum_probs=92.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHhhhhhh
Q 019729 80 LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK--DSSFLFMGRLLEGFGVGVISY 157 (336)
Q Consensus 80 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~ 157 (336)
+|-++....+.......+.+++.+++..+++|+|+|+++.++.++.+++.++.-+.+ +.+.+++..++.+++.+...+
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc
Confidence 455555666777777888888899999999999999999999999999998888765 677888888999999999999
Q ss_pred hHhHHHHhccC-------CCcchhHHhHHHHHHHHHHHHHHHhh
Q 019729 158 TVPVYIAEIAP-------QNMRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 158 ~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
..+++++|..+ .+.-|...+......-+|..++..+.
T Consensus 347 l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 347 LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999998874 23335666677766666666665444
No 220
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.75 E-value=7.7e-07 Score=83.93 Aligned_cols=177 Identities=16% Similarity=0.072 Sum_probs=111.2
Q ss_pred ChhhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 019729 45 SVSVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVP 124 (336)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 124 (336)
.++.......+.......|++ ....+.+.+.+..|.+.+. .+...+..+...++..++.++.||+|||+.++.+...
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~--~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGIN--YVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCc--eEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHH
Confidence 334444344444433334433 3444566677777877554 5666667777788888889999999999999999999
Q ss_pred HHHHHHHHHhhcc-------------hhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHH
Q 019729 125 NIIGWLIISFSKD-------------SSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAY 191 (336)
Q Consensus 125 ~~~~~~~~~~~~~-------------~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 191 (336)
+.++.++++.... ...+...-+.......+..++.+.+.+|.+|.+.|+++.++......+...+-.
T Consensus 369 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~ 448 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLIS 448 (513)
T ss_pred HHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHH
Confidence 9999988775421 111222223333334456667778999999999999999987666555544332
Q ss_pred Hhhc----cchhHHHHH-HhHHHHHHHH-HHhhcccCch
Q 019729 192 LLGL----FVNWRVLAV-LGVLPCTLLI-PGLFFIPESP 224 (336)
Q Consensus 192 ~~~~----~~~w~~~~~-~~~~~~~~~~-~~~~~~~e~~ 224 (336)
.... ..++...|. +.++..+... ...+++||+.
T Consensus 449 ~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 449 FFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred HHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 2221 112233333 3444444444 5667889985
No 221
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.75 E-value=6.8e-11 Score=109.53 Aligned_cols=151 Identities=19% Similarity=0.187 Sum_probs=98.4
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHH--h--h-cc----hhHHH
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIIS--F--S-KD----SSFLF 142 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~-~~----~~~~~ 142 (336)
..+.+.+..+.+.. -....+..+...++.++..++.||+|||+.++.+.++.+++.+.++ . . ++ ....+
T Consensus 275 ~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 352 (451)
T PF00083_consen 275 YSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSI 352 (451)
T ss_pred cccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 44556677777766 2233344455566777778999999999999999988888877664 1 1 11 11122
Q ss_pred HHHHHHHHH-hhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----h-hHHHHHHhHHHHHHHHHH
Q 019729 143 MGRLLEGFG-VGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----N-WRVLAVLGVLPCTLLIPG 216 (336)
Q Consensus 143 ~~r~l~G~~-~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~-w~~~~~~~~~~~~~~~~~ 216 (336)
+.-.+...+ ..+..++...+..|.+|.+.|+++.++......++.++++.+...+ + +.....+.++..+..++.
T Consensus 353 ~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~ 432 (451)
T PF00083_consen 353 VFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFV 432 (451)
T ss_pred eeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhhe
Confidence 222222222 2244566778899999999999999999888888888887776444 3 333333334444444556
Q ss_pred hhcccCch
Q 019729 217 LFFIPESP 224 (336)
Q Consensus 217 ~~~~~e~~ 224 (336)
.+++|||.
T Consensus 433 ~~~lpET~ 440 (451)
T PF00083_consen 433 YFFLPETK 440 (451)
T ss_pred eEEEeeCC
Confidence 77899985
No 222
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.75 E-value=3.9e-08 Score=88.37 Aligned_cols=110 Identities=12% Similarity=0.153 Sum_probs=84.5
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh--hc--chhHHHHHHHHHHHH
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF--SK--DSSFLFMGRLLEGFG 151 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~--~~~~~~~~r~l~G~~ 151 (336)
+++.+|.++.+.+++.++..++..++.++.|+++||+|||+.+..+......+..+..+ .+ +.+.+++...+.+++
T Consensus 252 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (366)
T TIGR00886 252 FKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFF 331 (366)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHH
Confidence 45668999999999999999999999999999999999998887777666665555443 22 455555555556666
Q ss_pred hhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHH
Q 019729 152 VGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIG 186 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 186 (336)
.|...+...+++.+..| +++|...|+.+....+|
T Consensus 332 ~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 332 SGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred hccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 66666777778888887 68999999988776654
No 223
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.73 E-value=7.3e-08 Score=88.74 Aligned_cols=164 Identities=13% Similarity=0.118 Sum_probs=108.9
Q ss_pred HHHhhhhhhccccccchhhHhHh-hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhch---------hHHHHHHHHH
Q 019729 55 VALGPIQFGFTCGYSSPTQAEII-SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGR---------KGSLMIAAVP 124 (336)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr---------r~~l~~~~~~ 124 (336)
+.++.+........+....|.+. +-+|++..+.|++.++..+...+..+++|.++||.-+ |..-.++...
T Consensus 263 i~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~ 342 (466)
T KOG2532|consen 263 IWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGG 342 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHH
Confidence 33344444444444555566555 4589999999999999999999999999999998744 3333455566
Q ss_pred HHHHHHHHHhhcc-hhHHHHHHHHHHHHhhhhhhhH-hHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----
Q 019729 125 NIIGWLIISFSKD-SSFLFMGRLLEGFGVGVISYTV-PVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----- 197 (336)
Q Consensus 125 ~~~~~~~~~~~~~-~~~~~~~r~l~G~~~g~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----- 197 (336)
.+++.+..++.++ .....+.-+..+.+..+....+ ..-..+. .+++-+..+|+.+....+..+++|.+.+.+
T Consensus 343 ~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t 421 (466)
T KOG2532|consen 343 PAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNT 421 (466)
T ss_pred HHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCC
Confidence 6666666666653 2212222222222222222222 2222222 457889999999999999999999998766
Q ss_pred --hhHHHHHHhHHHHHHHHHHhhc
Q 019729 198 --NWRVLAVLGVLPCTLLIPGLFF 219 (336)
Q Consensus 198 --~w~~~~~~~~~~~~~~~~~~~~ 219 (336)
.||..|++.+++.++..+...+
T Consensus 422 ~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 422 REEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHHHHHHHHHHHHhchheeE
Confidence 6999999999888877554443
No 224
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.72 E-value=1.3e-06 Score=80.58 Aligned_cols=137 Identities=12% Similarity=-0.013 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHHHHHHHhhcc---------------------hhHHHHHH
Q 019729 88 SIFGSLANVGAMVGAIASGQIAEYIGR-KGSLMIAAVPNIIGWLIISFSKD---------------------SSFLFMGR 145 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~r 145 (336)
.+....+.+...+.+++..++++|+|+ |++..++.++.+++.+...+.++ .+..++.-
T Consensus 308 ~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (477)
T TIGR01301 308 AFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVF 387 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHH
Confidence 344555556666778888999999995 77778998888888877765442 25677778
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCC--CcchhHHhHHHHHHHHHHHHHHHhhccc------hhHHHHHHhHHHHHHHHHH-
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQ--NMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPG- 216 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~~~~~~~- 216 (336)
.+.|+..+..+.+.++++++..++ ++.|..+|+.|.+..+.+++.....+.+ +-.+.+.++++.++++.+.
T Consensus 388 ~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 388 AILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred HHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHH
Confidence 899999999999999999999995 4559999999999999998887766553 3446788888888887554
Q ss_pred hhcccCch
Q 019729 217 LFFIPESP 224 (336)
Q Consensus 217 ~~~~~e~~ 224 (336)
++.+|.++
T Consensus 468 ~~~~~~~~ 475 (477)
T TIGR01301 468 LILLPRPR 475 (477)
T ss_pred HHhCCCCC
Confidence 45567654
No 225
>PRK11462 putative transporter; Provisional
Probab=98.71 E-value=2.6e-06 Score=79.14 Aligned_cols=111 Identities=14% Similarity=0.097 Sum_probs=72.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHHHhhhhhhhHhHH
Q 019729 85 SEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKD--SSFLFMGRLLEGFGVGVISYTVPVY 162 (336)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~r~l~G~~~g~~~~~~~~~ 162 (336)
...+.+..++.++.+++.+++++++||+|+|+.+..+..+.++..++..+.++ ...+++.-++.|++.+...+...++
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m 342 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777888889999999999999999999877655544443333333222 2234445566788777777777788
Q ss_pred HHhccCC-----Ccc--hhHHhHHHHHHHHHHHHHHHhhc
Q 019729 163 IAEIAPQ-----NMR--GSLGSVNQLSVTIGIMLAYLLGL 195 (336)
Q Consensus 163 ~~~~~~~-----~~r--~~~~~~~~~~~~~g~~~~~~~~~ 195 (336)
++|..+- .+| |...+......-+|..+++.+++
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g 382 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIG 382 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877662 233 44445555666666666655543
No 226
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.70 E-value=9e-07 Score=81.00 Aligned_cols=124 Identities=14% Similarity=-0.014 Sum_probs=92.3
Q ss_pred hhhHhHhhhc--cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 019729 71 PTQAEIISDL--KLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLE 148 (336)
Q Consensus 71 ~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 148 (336)
..++.+.++. +.+....+...+.+..+..+|.++++++.||+++|+++.++.++.++..++..+.++... +..-++.
T Consensus 253 s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~ 331 (410)
T TIGR00885 253 TFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLC 331 (410)
T ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHH
Confidence 3444444443 444444566677777888999999999999999999999999888888888888776544 5667788
Q ss_pred HHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 149 GFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 149 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
|++.+..+|...+...+..+++.+....++... .+|+.+.|.+.+.+
T Consensus 332 glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~ 378 (410)
T TIGR00885 332 SAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFI 378 (410)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHH
Confidence 888889999999999999986654334443332 28888888877655
No 227
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.70 E-value=4.3e-08 Score=88.74 Aligned_cols=144 Identities=18% Similarity=0.225 Sum_probs=118.7
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVI 155 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 155 (336)
-.+++|-.+...|........+-++.-++.+++..|+|+-+++.+++.+.++=.+..++.+|.|+.+..-+++|+..+..
T Consensus 397 Hled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~ali 476 (618)
T KOG3762|consen 397 HLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALI 476 (618)
T ss_pred HHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHH
Confidence 45677766677787777778888899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhHHHHhccCCCcchhHHhHHHH-HHHHHHHHHHHhh----ccchhHHHHHHhHHHHHHHHHHhhc
Q 019729 156 SYTVPVYIAEIAPQNMRGSLGSVNQL-SVTIGIMLAYLLG----LFVNWRVLAVLGVLPCTLLIPGLFF 219 (336)
Q Consensus 156 ~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~----~~~~w~~~~~~~~~~~~~~~~~~~~ 219 (336)
+....+|++...|++.|..+.++.+. ..++|--+|.+++ ..++-|..|.+.++.+++.++....
T Consensus 477 Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 477 WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998654 3444544555554 4457788888777766665554443
No 228
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.68 E-value=5.5e-06 Score=73.46 Aligned_cols=140 Identities=14% Similarity=0.205 Sum_probs=112.6
Q ss_pred hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hhchhHHHHHHHHHHHHHHHHHHh---hcchhHHHHHHHHHHHHh
Q 019729 77 ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAE-YIGRKGSLMIAAVPNIIGWLIISF---SKDSSFLFMGRLLEGFGV 152 (336)
Q Consensus 77 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~~~ 152 (336)
.+-+|++..+...++.....|.+++....|++.. |.++++.-.+++.+.+++..+..+ ..+.+.+...-++.|++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~ 315 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN 315 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence 4558999999999999999999999999998887 678888877887777666655443 457788888999999999
Q ss_pred hhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc--------------hhHHHHHHhHHHHHHHHHH
Q 019729 153 GVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV--------------NWRVLAVLGVLPCTLLIPG 216 (336)
Q Consensus 153 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------------~w~~~~~~~~~~~~~~~~~ 216 (336)
|.+.....+.+.+...+++.|..+|.+.....++..++..+++.+ +|...|.+-++..++++++
T Consensus 316 G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 316 GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988888777777776443 4556666655555554443
No 229
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.59 E-value=3.1e-06 Score=79.17 Aligned_cols=109 Identities=20% Similarity=0.258 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchhHH-------HHHHHHHHHHHHHHHH-----hh-----cchhHHHHHHHHHH
Q 019729 87 FSIFGSLANVGAMVGAIASGQIAEYIGRKGS-------LMIAAVPNIIGWLIIS-----FS-----KDSSFLFMGRLLEG 149 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~-------l~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~r~l~G 149 (336)
.+++.++..+...+..++.+++.||+|+|+. +.+|.++.+++.+..+ .. .+.++++..-++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3566666667787889999999999999873 6677777666654321 21 34677778899999
Q ss_pred HHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhc
Q 019729 150 FGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 195 (336)
Q Consensus 150 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 195 (336)
+|.+...+...+++.+..|++.++.++|+++....+|..++..++.
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~ 436 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVAT 436 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888887774
No 230
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.57 E-value=3.7e-06 Score=65.33 Aligned_cols=112 Identities=13% Similarity=0.142 Sum_probs=91.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhH
Q 019729 82 LTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPV 161 (336)
Q Consensus 82 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~ 161 (336)
+++..--.-.++......+++++.+.+.+++|.|+.++++.+.+.+-.... +-++.+.++.+-.+.|++.+..++....
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhH
Confidence 344343455666777788888999999999999999999999998655443 4567788899999999999999999999
Q ss_pred HHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh
Q 019729 162 YIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 162 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
++.+..+++.|++..+++......+.++|..+.
T Consensus 113 ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 113 YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988777777777776554
No 231
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.57 E-value=1e-05 Score=71.82 Aligned_cols=213 Identities=14% Similarity=0.158 Sum_probs=128.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhchhH-HHHHHHHHHHHHHHHHHhhcc--hh-HHHHHHHHHHHHhhhhhhhHhH
Q 019729 86 EFSIFGSLANVGAMVGAIASGQIAEYIGRKG-SLMIAAVPNIIGWLIISFSKD--SS-FLFMGRLLEGFGVGVISYTVPV 161 (336)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~--~~-~~~~~r~l~G~~~g~~~~~~~~ 161 (336)
..+...++..+...+-+|+.|.++|..|+|| .+-+...+..++.++..++++ ++ ..++...+..++.........+
T Consensus 59 ~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds 138 (438)
T COG2270 59 YWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDS 138 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhh
Confidence 3577788888899999999999999999555 555556666677777777665 44 3444567777888888888999
Q ss_pred HHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh------c----------------cchhHHHHHHhHHHHHHHHH-Hhh
Q 019729 162 YIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG------L----------------FVNWRVLAVLGVLPCTLLIP-GLF 218 (336)
Q Consensus 162 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~------~----------------~~~w~~~~~~~~~~~~~~~~-~~~ 218 (336)
++.+..++++-++..++-.....+|+.+.-.+. + ...-|..+.++++..++..+ .++
T Consensus 139 ~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~ 218 (438)
T COG2270 139 MLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMIL 218 (438)
T ss_pred HhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHh
Confidence 999999988888877765555555555443332 0 01356667766666555433 444
Q ss_pred cccCchhHHHHcCChHHHHHHHHHHhCCChhhHHHHHHHHHHhhhhchhhhhhHHHHhcccchHHHHHHHHHHHHHHhhc
Q 019729 219 FIPESPRWLAKMGMTEDFESSLQVLRGFDTDISIEVNEIKRSVASSSRRTAIRFAELKRKRYWFPLMIGIGLLVLQQLSG 298 (336)
Q Consensus 219 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (336)
.+++.++- +... .+.....-++-..++++.+++++....++.. +...-|
T Consensus 219 ~v~~~~~~---~~~~------------------------~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~----~~~~DG 267 (438)
T COG2270 219 NVHDAEKI---SSPP------------------------PTALRNGFKELKSTFKEIRGRKNLVLFLIAR----FFYIDG 267 (438)
T ss_pred cccccccc---cccc------------------------hHHHHHHHHHHHHHHHHHhcccchHHHHHHH----HHHHhh
Confidence 55554320 0000 0000011112334555666555444433332 223335
Q ss_pred hHHHHHhHHHHHH-hcCCCCcchhHHHHHHHH
Q 019729 299 INGVLFYSSNIFA-NAGKINISLDVILPIVEA 329 (336)
Q Consensus 299 ~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~ 329 (336)
.+.+......+-. ++|++..+...+....++
T Consensus 268 v~til~~~~~fg~~~~gls~~~lll~g~~~~v 299 (438)
T COG2270 268 VNTILAMGGVFGAADLGLSSTELLLIGIALSV 299 (438)
T ss_pred HHHHHHHHHHHHHHHcCccHHHHHHHHHHHHH
Confidence 6667776666666 559988777655443333
No 232
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.50 E-value=6.6e-07 Score=78.40 Aligned_cols=164 Identities=12% Similarity=0.129 Sum_probs=120.1
Q ss_pred hHHHHHHHHHhhhhhhccccccchhhHh-HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc--hhHHHHHHHHH
Q 019729 48 VVFCVLVVALGPIQFGFTCGYSSPTQAE-IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIG--RKGSLMIAAVP 124 (336)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~ 124 (336)
.+.....++.++ ......-|.++. +.+.+..+.-+.|...--..+.+.++..+.|.++||++ |-.....+++.
T Consensus 272 I~~~agai~~~n----~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~ 347 (464)
T KOG3764|consen 272 ILLIAGAITFSN----SSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLAT 347 (464)
T ss_pred Hhhhhcchhhcc----chHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHH
Confidence 344444444443 344455566665 45556644446676666677899999999999999999 53344455566
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcc------hhHHhHHHHHHHHHHHHHHHhhccc-
Q 019729 125 NIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMR------GSLGSVNQLSVTIGIMLAYLLGLFV- 197 (336)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r------~~~~~~~~~~~~~g~~~~~~~~~~~- 197 (336)
.++++....+++++.++++-++..|++.+...+.......+..+.++- |...++...++++|..+||.+++.+
T Consensus 348 ~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv 427 (464)
T KOG3764|consen 348 VGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLV 427 (464)
T ss_pred HHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhe
Confidence 667777778899999999999999999988888877777777765443 5678888999999999999999876
Q ss_pred ---hhHHHHHHhHHHHHHHHH
Q 019729 198 ---NWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 198 ---~w~~~~~~~~~~~~~~~~ 215 (336)
|++|...+.++..++..-
T Consensus 428 ~~iGF~wl~~iig~~n~iyap 448 (464)
T KOG3764|consen 428 EAIGFEWLMTIIGILNLIYAP 448 (464)
T ss_pred eehhHHHHHHHHHHHHHHHHH
Confidence 888887777777666533
No 233
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.48 E-value=1.7e-06 Score=81.35 Aligned_cols=142 Identities=18% Similarity=0.213 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHhhhhhhhHhHH
Q 019729 86 EFSIFGSLANVGAMVGAIASGQIAEYIGR-KGSLMIAAVPNIIGWLIISFS--KDSSFLFMGRLLEGFGVGVISYTVPVY 162 (336)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~g~~~~~~~~~ 162 (336)
..++......++..+++.+.|.+..+++| |+.++++..++.+++-+++.. +|....++.-++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 46788888999999999999999999887 566667776666544444432 355556677889999999888888888
Q ss_pred HHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc---------------------------------------------
Q 019729 163 IAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV--------------------------------------------- 197 (336)
Q Consensus 163 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------------------------------------------- 197 (336)
+.-..|+++-+.+.++......+|+.+|..+...+
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~i 509 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAI 509 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhC
Confidence 88888999999999998888888887775543111
Q ss_pred ---------------------hhHHHHHHhHHHHHHHHHHhhcccCchhHH
Q 019729 198 ---------------------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 227 (336)
Q Consensus 198 ---------------------~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 227 (336)
++|+.|+....+.++++++.+++++..+++
T Consensus 510 PGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~~~~m 560 (599)
T PF06609_consen 510 PGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDIDKYM 560 (599)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHhh
Confidence 278899998888999988888888765543
No 234
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.39 E-value=3.1e-05 Score=71.00 Aligned_cols=133 Identities=14% Similarity=0.166 Sum_probs=82.0
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHH-----hhcchhHHHHHHHHHHH
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIIS-----FSKDSSFLFMGRLLEGF 150 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~r~l~G~ 150 (336)
+++.+|.+..+.++.......+..++..+.+.+.++.++++.+.....+..++.++.. ..+++...++..++.++
T Consensus 245 l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~ 324 (413)
T PRK15403 245 LIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAF 324 (413)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 4556799999999988888888888888888876554444443322222222222222 12333345667888888
Q ss_pred HhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc---hhHHHHHHhHHH
Q 019729 151 GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV---NWRVLAVLGVLP 209 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~ 209 (336)
|.+...+......- .-....+|++.++.+.....+..+++..++++ +-++.+...+++
T Consensus 325 G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 385 (413)
T PRK15403 325 GIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVV 385 (413)
T ss_pred HHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 88888877765332 22233578888888877777777777776655 233444444333
No 235
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.38 E-value=1.8e-06 Score=58.61 Aligned_cols=61 Identities=15% Similarity=0.251 Sum_probs=53.1
Q ss_pred ccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 019729 64 FTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVP 124 (336)
Q Consensus 64 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 124 (336)
...+...|.+|.+.++.|++..+.|.+.++..+...++.+++|.++||+|+++.++....+
T Consensus 14 ~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 14 AALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3456667888888899999999999999999999999999999999999998877765544
No 236
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.37 E-value=7.1e-07 Score=79.53 Aligned_cols=130 Identities=15% Similarity=0.262 Sum_probs=101.6
Q ss_pred hhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----hchhHHHHHH-HHHHHHHHHHHHhhcch-------
Q 019729 71 PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEY----IGRKGSLMIA-AVPNIIGWLIISFSKDS------- 138 (336)
Q Consensus 71 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~l~~~-~~~~~~~~~~~~~~~~~------- 138 (336)
.+.+++..+.|++....+.+--..-+...+.+++.|..+|| |||||.++.. .++.+++.++.+++.+.
T Consensus 53 sy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~ 132 (498)
T KOG0637|consen 53 SYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDN 132 (498)
T ss_pred ccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCC
Confidence 34555778889999888888888888899999999999995 7988877655 45556777777765432
Q ss_pred ----------hHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchh-HHhHHHHHHHHHHHHHHHhhccchhH
Q 019729 139 ----------SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGS-LGSVNQLSVTIGIMLAYLLGLFVNWR 200 (336)
Q Consensus 139 ----------~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~~~~~~~~~~w~ 200 (336)
..++++-.+.=++........-+++.|.+.++++.+ +++++....++|+.+|..++.+.+|+
T Consensus 133 ~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~~~ 205 (498)
T KOG0637|consen 133 ERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLGLY 205 (498)
T ss_pred cccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccCce
Confidence 233334444455666788889999999998887777 99999999999999999999888776
No 237
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.34 E-value=2.2e-05 Score=72.23 Aligned_cols=151 Identities=18% Similarity=0.214 Sum_probs=109.6
Q ss_pred hhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh---c--hhHHHHHHHHHHHHHHHHHHhhc----chhHH
Q 019729 71 PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI---G--RKGSLMIAAVPNIIGWLIISFSK----DSSFL 141 (336)
Q Consensus 71 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~---G--rr~~l~~~~~~~~~~~~~~~~~~----~~~~~ 141 (336)
...+.+++++|+++++...+.++..+-. ...++.|.++|-+ | ||+-++++.++.+++.+..+..+ +....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 3456689999999999888777766654 4577899999987 3 45555566666655555555533 45556
Q ss_pred HHHHHHHHHHhhhhhhhHhHHHHhccC--CCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHH
Q 019729 142 FMGRLLEGFGVGVISYTVPVYIAEIAP--QNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 142 ~~~r~l~G~~~g~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~ 215 (336)
.+.-++..++......+.-+++.|... ++.|+...+.......+|.+++..+++.+ +++..|.+.+++.++..+
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHH
Confidence 666778888898999999999999883 33377788888888888999888887665 778888887777666654
Q ss_pred Hhhc-ccC
Q 019729 216 GLFF-IPE 222 (336)
Q Consensus 216 ~~~~-~~e 222 (336)
..++ .+|
T Consensus 170 ~~~~~~~e 177 (433)
T PF03092_consen 170 VALFLLEE 177 (433)
T ss_pred HHHHhhhh
Confidence 4443 444
No 238
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.33 E-value=2e-05 Score=69.56 Aligned_cols=125 Identities=15% Similarity=0.074 Sum_probs=99.8
Q ss_pred chhhHhHhhh-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 019729 70 SPTQAEIISD-LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLE 148 (336)
Q Consensus 70 ~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 148 (336)
...++.+..+ .|.+..+.+...+.+..+..+|.+++.++..|+...|.+.+...+..+.++..+++++... +.+-++.
T Consensus 256 gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~-~~~l~~i 334 (422)
T COG0738 256 GSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVA-LYALFLI 334 (422)
T ss_pred HHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHH-HHHHHHH
Confidence 3344545555 8999999999999999999999999999999999999999999888888888888888544 4566788
Q ss_pred HHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 149 GFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 149 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
|+..+..+|...+...+..| ++-... |..-....+|+.+.|.+.+.+
T Consensus 335 g~F~simfPTIfslal~~l~-~~ts~~-s~~l~maivGGAiiP~l~G~i 381 (422)
T COG0738 335 GLFNSIMFPTIFSLALKNLG-EHTSVG-SGLLVMAIVGGAIIPPLQGVI 381 (422)
T ss_pred HHHhHHHHHHHHHHHHhccC-cccccc-ceeeeeheecchHHHHHHHHH
Confidence 99999999999999999998 444444 333444556777777777666
No 239
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.28 E-value=0.00031 Score=64.78 Aligned_cols=126 Identities=8% Similarity=0.048 Sum_probs=91.1
Q ss_pred hhHhHhhhccCC-----chhHHHHHHHHHHHHHHH-HHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh--c--c----
Q 019729 72 TQAEIISDLKLT-----ISEFSIFGSLANVGAMVG-AIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS--K--D---- 137 (336)
Q Consensus 72 ~~~~~~~~~g~s-----~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~--~---- 137 (336)
.+-.++|.+.++ .+...++-+...+...+. .++.+++++|++|++++.+....+....+++++. + +
T Consensus 25 iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p 104 (472)
T TIGR00769 25 ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHP 104 (472)
T ss_pred HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCC
Confidence 455577777663 245777777776665555 8899999999999999887776666665555543 1 1
Q ss_pred -----------------------hhHHHHHHHHHHHHhhhhhh-hHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHh
Q 019729 138 -----------------------SSFLFMGRLLEGFGVGVISY-TVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL 193 (336)
Q Consensus 138 -----------------------~~~~~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 193 (336)
.|...+.-+...+......+ ..+.+++|.++.++-.+..+++..+.++|.++++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 105 TALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred cHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333444444445555 778999999999999999999999999999999988
Q ss_pred hccc
Q 019729 194 GLFV 197 (336)
Q Consensus 194 ~~~~ 197 (336)
...+
T Consensus 185 ~~~~ 188 (472)
T TIGR00769 185 IKYF 188 (472)
T ss_pred HHHH
Confidence 7554
No 240
>PTZ00207 hypothetical protein; Provisional
Probab=98.24 E-value=2.5e-05 Score=73.98 Aligned_cols=143 Identities=15% Similarity=0.112 Sum_probs=100.6
Q ss_pred hHhHhhhc-cCCchh--HHHHHHHHHHHHHHHHHHHHHHHhhhchh---------HHHHHHHHHHHHHHHHHHhhcchhH
Q 019729 73 QAEIISDL-KLTISE--FSIFGSLANVGAMVGAIASGQIAEYIGRK---------GSLMIAAVPNIIGWLIISFSKDSSF 140 (336)
Q Consensus 73 ~~~~~~~~-g~s~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~Grr---------~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (336)
+.++.+.+ |.+.++ ...+.++..++..+|.+..|+++...-+| -.+.+..+ +.++.+++++.-....
T Consensus 376 ~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~ 454 (591)
T PTZ00207 376 ARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAA 454 (591)
T ss_pred HHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccH
Confidence 34566667 663322 22278888889999999988887222222 22333344 5555555555544367
Q ss_pred HHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHH-HHhhccc--------------h---hHHH
Q 019729 141 LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLA-YLLGLFV--------------N---WRVL 202 (336)
Q Consensus 141 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~-~~~~~~~--------------~---w~~~ 202 (336)
+++..++.|++.|..+++....++|+|. |+-|+-..+......+|+.+- ..+.+.+ | .+..
T Consensus 455 L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~ 533 (591)
T PTZ00207 455 LPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMP 533 (591)
T ss_pred hHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhH
Confidence 8999999999999999999999999999 999999999888889988876 3333322 1 6788
Q ss_pred HHHhHHHHHHHHHHh
Q 019729 203 AVLGVLPCTLLIPGL 217 (336)
Q Consensus 203 ~~~~~~~~~~~~~~~ 217 (336)
|++.+.+++.+.+..
T Consensus 534 ~~v~~~~~~~g~~~s 548 (591)
T PTZ00207 534 LAFLLGLSFLAFITS 548 (591)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888877777775543
No 241
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.24 E-value=1.1e-05 Score=74.75 Aligned_cols=148 Identities=10% Similarity=0.004 Sum_probs=95.1
Q ss_pred hhhhhhccccccchhhHhHhhh-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----hchhHHHHHHHHHHHHHH-HH
Q 019729 58 GPIQFGFTCGYSSPTQAEIISD-LKLTISEFSIFGSLANVGAMVGAIASGQIAEY----IGRKGSLMIAAVPNIIGW-LI 131 (336)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~l~~~~~~~~~~~-~~ 131 (336)
+.+............+|.+.++ .|.+..+.+.+.+.+.++.+++.+++|+++|| +.+|........++.+.. +.
T Consensus 281 ~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~ 360 (495)
T KOG2533|consen 281 CYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAIS 360 (495)
T ss_pred HHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444555556667777776 66999999999999999999999999999999 778877777766665444 44
Q ss_pred HHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchh-HHhHHHHHHHHHHHHHHHhh-cc----chhHHHHHH
Q 019729 132 ISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGS-LGSVNQLSVTIGIMLAYLLG-LF----VNWRVLAVL 205 (336)
Q Consensus 132 ~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~~~~~~-~~----~~w~~~~~~ 205 (336)
....++.......-+..+.+.+...+.....+++......|.. ..+....+.+.++.+++.+- .. ..|.+.|..
T Consensus 361 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~ 440 (495)
T KOG2533|consen 361 LLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYM 440 (495)
T ss_pred HHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHH
Confidence 4444434444444444444555666667777777776555544 34445555555555554443 22 256666643
No 242
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.22 E-value=0.00013 Score=67.35 Aligned_cols=121 Identities=11% Similarity=0.205 Sum_probs=107.5
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHH-HHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASG-QIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGV 154 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~ 154 (336)
+...++++..+.+.+.+.......+++++.. .+...+|-|++..+|++...+..++.+++++.|+++....+.++. +.
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~~ 346 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-GI 346 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-cc
Confidence 5667899999999888888888888888777 888889999999999999999999999999999988888887775 47
Q ss_pred hhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 155 ISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 155 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
..+...++++.+..++++|+..++....-++..+++|.+-+.+
T Consensus 347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 347 VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 8899999999999999999999999999999999888876544
No 243
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.18 E-value=7e-05 Score=70.87 Aligned_cols=133 Identities=23% Similarity=0.332 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchh---HHHHHHHHHHHHhhhhhhhHhHHHHhccCC
Q 019729 93 LANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQ 169 (336)
Q Consensus 93 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~ 169 (336)
.............+.+.|++|||..+..+.++..+++++.++..... ...+...+..++.+..+.....+.+|.+|+
T Consensus 358 ~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt 437 (521)
T KOG0255|consen 358 LSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPT 437 (521)
T ss_pred HHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH
Confidence 33335566666668999999999999999999999999999876543 355556666667777777889999999999
Q ss_pred CcchhHHhHHHHHHHHHHHHHHHhhccchh--H-HHHHH-hHHHHHHHHHHhhcccCchh
Q 019729 170 NMRGSLGSVNQLSVTIGIMLAYLLGLFVNW--R-VLAVL-GVLPCTLLIPGLFFIPESPR 225 (336)
Q Consensus 170 ~~r~~~~~~~~~~~~~g~~~~~~~~~~~~w--~-~~~~~-~~~~~~~~~~~~~~~~e~~~ 225 (336)
..|..+.+.......+|.+++|.+...... . ..+.+ .....+.+++...++||+..
T Consensus 438 ~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 438 VVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccCC
Confidence 999999999999999999999988754421 1 12222 23333444455588999853
No 244
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.03 E-value=9.7e-05 Score=64.78 Aligned_cols=121 Identities=15% Similarity=0.212 Sum_probs=106.3
Q ss_pred hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhh
Q 019729 77 ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIG--RKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGV 154 (336)
Q Consensus 77 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~ 154 (336)
...+|+++.+.|-+.+...++.++.+.......||.. -+-.+..++.+..-..++.+.++....+..+..+..+..+.
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHH
Confidence 4678999999999998888888888888888888887 67777777777777777778888888888889999998888
Q ss_pred hhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 155 ISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 155 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
..+....++....|.++||..+|+.....+++-++||.+++..
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i 411 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVI 411 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhee
Confidence 8899999999999999999999999999999999999999655
No 245
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.90 E-value=0.00075 Score=62.86 Aligned_cols=110 Identities=16% Similarity=0.169 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchh-H-----H-HHHHHHHHHHHHHHHHhh---------cchhHHHHHHHHHHH
Q 019729 87 FSIFGSLANVGAMVGAIASGQIAEYIGRK-G-----S-LMIAAVPNIIGWLIISFS---------KDSSFLFMGRLLEGF 150 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr-~-----~-l~~~~~~~~~~~~~~~~~---------~~~~~~~~~r~l~G~ 150 (336)
.+|..++..+.-.+.+|+.+++=.|.+|| + . +.+|+++.+++.+.+.++ .+.+++++.-+++++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 57888888888888888888886676432 1 1 566777777776555431 256778888999999
Q ss_pred HhhhhhhhHhHHHHhccCCCcchhHHhHHHHH-HHHHHHHHHHhhcc
Q 019729 151 GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLS-VTIGIMLAYLLGLF 196 (336)
Q Consensus 151 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~ 196 (336)
|.-...|+..+.+++..|++.|+..+|.+... ..+|..++..++..
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~ 436 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQ 436 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998764 46777777666543
No 246
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.90 E-value=0.00039 Score=63.38 Aligned_cols=129 Identities=16% Similarity=0.184 Sum_probs=97.8
Q ss_pred cchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh---hc-------ch
Q 019729 69 SSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF---SK-------DS 138 (336)
Q Consensus 69 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~-------~~ 138 (336)
+......+...-|+++...|..-+...+..+.+.+...++.+|+|..|.=+++......+..++.. .+ +.
T Consensus 277 f~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred CcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 344555566666999999999999999999999999999999999988888887766555544432 22 22
Q ss_pred hHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 139 SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 139 ~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
..++.+-.+.-+|.=++.....-++.|..|+++||...|.-+....+-.++...++-.+
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33444444555666677777888999999999999999998888888777776666544
No 247
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.88 E-value=0.0018 Score=59.25 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCC
Q 019729 91 GSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQN 170 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~ 170 (336)
.++......+++++.+.+.|+.|.|+.+.++...+....+...+-+ -+.+++...+.|+|.+..+.....|++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 6777888899999999999999999999999999988877766654 556788999999999999999999999999999
Q ss_pred cchhHHhHHHHHHHHHHHHHHHhh
Q 019729 171 MRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 171 ~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
.+.+..++.......+.++|..+-
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhh
Confidence 999999998888887777775554
No 248
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.78 E-value=0.0038 Score=57.21 Aligned_cols=109 Identities=20% Similarity=0.370 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh---hchhHHHHHHHHHHHHHHHHHHhh------------------cchhHHHHHH
Q 019729 87 FSIFGSLANVGAMVGAIASGQIAEY---IGRKGSLMIAAVPNIIGWLIISFS------------------KDSSFLFMGR 145 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~g~l~dr---~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~~~r 145 (336)
.+...-...+|..++..+.+.+++| +||++.+.++..+..+.+++.-.. +++...++..
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 3444555566667777777777754 799999999998888887776553 1355777888
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF 196 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 196 (336)
++.|++.+......+.++.... +++|..+.++.-.-..++..++-.....
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999 5889998888877777777665555443
No 249
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.65 E-value=0.0012 Score=60.90 Aligned_cols=143 Identities=15% Similarity=0.240 Sum_probs=104.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh----------hcchhHHHHHHHHHHHH
Q 019729 82 LTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF----------SKDSSFLFMGRLLEGFG 151 (336)
Q Consensus 82 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~r~l~G~~ 151 (336)
+++...+.+..+..++.++|..+...+.-+..-|+++.++.++.++..+.-.. .++.+..+..-++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 88888898888889999999999988888888899888888777666553221 12222233345666776
Q ss_pred hhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc------------hhHHHHHHhHHHHHHHHHHhhc
Q 019729 152 VGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------------NWRVLAVLGVLPCTLLIPGLFF 219 (336)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------------~w~~~~~~~~~~~~~~~~~~~~ 219 (336)
.+..+-+...+++|.+|+..-|+..++.....++|..++..++..+ +-.+..+++.+..++.+.+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 7777778888999999999999999999888888888887777554 1224555566666666666667
Q ss_pred ccCch
Q 019729 220 IPESP 224 (336)
Q Consensus 220 ~~e~~ 224 (336)
+|+..
T Consensus 412 Lp~~~ 416 (433)
T PF03092_consen 412 LPPQK 416 (433)
T ss_pred cCCCc
Confidence 77653
No 250
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.60 E-value=0.001 Score=59.82 Aligned_cols=112 Identities=23% Similarity=0.228 Sum_probs=79.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHH---HHhhcchhHHHHHHHHHHHHhhhhhhhHh
Q 019729 84 ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLI---ISFSKDSSFLFMGRLLEGFGVGVISYTVP 160 (336)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 160 (336)
.++..+....+.+|-.++.--...+ |+-+.+.+.+.-++..+..++ .-+.++.+.+++.-+..|+..|..+.-..
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF 357 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTF 357 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 4567788888887776665433222 332333322222222222222 22457888888889999999999999999
Q ss_pred HHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 161 VYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 161 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
..+.|-.|+++|..++|....+-.+|..++..++-.+
T Consensus 358 ~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 358 YRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988887544
No 251
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.55 E-value=0.0012 Score=59.58 Aligned_cols=104 Identities=14% Similarity=0.283 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHhh--c-c------hhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCC---cchhHHhHHHHHH
Q 019729 116 GSLMIAAVPNIIGWLIISFS--K-D------SSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQN---MRGSLGSVNQLSV 183 (336)
Q Consensus 116 ~~l~~~~~~~~~~~~~~~~~--~-~------~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~ 183 (336)
|+++++.+++.+|.++..++ + . .+.++++-.+.++|.|+.-+...++.+|.++++ +|.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888888888884443 2 2 257888899999999999999999999999876 3455667789999
Q ss_pred HHHHHHHHHhhccc----hhHHHHHHhHHHHHHHHHHhhc
Q 019729 184 TIGIMLAYLLGLFV----NWRVLAVLGVLPCTLLIPGLFF 219 (336)
Q Consensus 184 ~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 219 (336)
++|..+++.+..++ +|.+.|.++++..+++++..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 99999998888776 7999999988887777665544
No 252
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.43 E-value=0.0015 Score=58.78 Aligned_cols=129 Identities=12% Similarity=0.088 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccC
Q 019729 89 IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAP 168 (336)
Q Consensus 89 ~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~ 168 (336)
.+.-+-.+-.++..+.+.++.+|+..+.=...+.++..++.++.+++++.+.-+++-.+.+++.|..-...-.+.+ .++
T Consensus 63 ~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~ 141 (402)
T PF02487_consen 63 AVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYG 141 (402)
T ss_pred HHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcC
Confidence 3444445566677788889999987555556677788889999999999988888889999988887777777644 555
Q ss_pred CCcchhHHhHHHHHHHHHHHHHHHhhcc---c--hhHHHHHHhHHHHHHHHHHhh-cccC
Q 019729 169 QNMRGSLGSVNQLSVTIGIMLAYLLGLF---V--NWRVLAVLGVLPCTLLIPGLF-FIPE 222 (336)
Q Consensus 169 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~---~--~w~~~~~~~~~~~~~~~~~~~-~~~e 222 (336)
+ ...+.+..+.+.++++|+..-.. . +.|..+++...+.++..+..+ .+|.
T Consensus 142 ~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 142 K----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred c----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3 34666777777777776654322 2 456666666655554444433 4443
No 253
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.43 E-value=0.033 Score=51.02 Aligned_cols=149 Identities=11% Similarity=-0.051 Sum_probs=74.6
Q ss_pred cccchhhHhHhhhcc-CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh------h--c-
Q 019729 67 GYSSPTQAEIISDLK-LTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF------S--K- 136 (336)
Q Consensus 67 ~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~--~- 136 (336)
-++....+.+..+.. -+---.+...-+..+..++.++..|.+.||..|.++...+.+..-++..+.+. . +
T Consensus 19 R~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~ 98 (432)
T PF06963_consen 19 RMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSS 98 (432)
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 334444444444432 13223444455556677888889999999999999887776554333322221 1 1
Q ss_pred ---chhHH---HHHHHHHHH-HhhhhhhhHhHHHHhcc------CCCcchhHHhHHHHHHHHHHHHHHHhhccc----hh
Q 019729 137 ---DSSFL---FMGRLLEGF-GVGVISYTVPVYIAEIA------PQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NW 199 (336)
Q Consensus 137 ---~~~~~---~~~r~l~G~-~~g~~~~~~~~~~~~~~------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w 199 (336)
+.+.. ++.-.+.|. ..-.......+.=.||. +++.+.+.++...-.--+..+++|.+.+.+ +.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~ 178 (432)
T PF06963_consen 99 SSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASP 178 (432)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCH
Confidence 11111 111112221 11111112222223443 234444555555545555667777776655 66
Q ss_pred HHHHHHhHHHHHHHHH
Q 019729 200 RVLAVLGVLPCTLLIP 215 (336)
Q Consensus 200 ~~~~~~~~~~~~~~~~ 215 (336)
+...++.+...++.++
T Consensus 179 ~~~~~~i~~~N~~S~~ 194 (432)
T PF06963_consen 179 VIAAIFIAGWNLASVF 194 (432)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6666666666655544
No 254
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.38 E-value=0.02 Score=50.64 Aligned_cols=133 Identities=14% Similarity=0.129 Sum_probs=85.6
Q ss_pred hhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHh-----hhchhHHHHH-HHHHHHHHHHHH
Q 019729 59 PIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAE-----YIGRKGSLMI-AAVPNIIGWLII 132 (336)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~Grr~~l~~-~~~~~~~~~~~~ 132 (336)
+...|.-.+... .+|.+.+.-|.|-++.+....++. -..-.+++.++.| |+||||..++ +..+.+..++..
T Consensus 40 YllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllL 116 (510)
T KOG3574|consen 40 YLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLL 116 (510)
T ss_pred HHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHH
Confidence 455566666666 788888888888877766544431 2344567888888 9999987543 334444444444
Q ss_pred Hhh-----------cchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh
Q 019729 133 SFS-----------KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 133 ~~~-----------~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
+.. ++...+....++.-+..+.-..+.-.+.-....+++-|.+......+...|.+++..+-
T Consensus 117 s~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 117 SYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 432 22223333445556666666666666666777888889888888888888888775543
No 255
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.32 E-value=0.0069 Score=57.56 Aligned_cols=149 Identities=15% Similarity=0.125 Sum_probs=111.2
Q ss_pred cchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-chhHHHHHHHHHHHHHHHHHHhhcc----------
Q 019729 69 SSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYI-GRKGSLMIAAVPNIIGWLIISFSKD---------- 137 (336)
Q Consensus 69 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~---------- 137 (336)
....+..+.++++.+...+.-..+.+.-...+..+.+++++|-| ||-+++.++.++..++.++..++..
T Consensus 57 ~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 44566678888898888888888888888888899999999986 8999999888888877655443211
Q ss_pred ---------------hhHHHHHHHHHHHHhhhhhhhHhHHHHhccC---C-Ccc--hhHHhHHHHHHHHHHHHHHHhhcc
Q 019729 138 ---------------SSFLFMGRLLEGFGVGVISYTVPVYIAEIAP---Q-NMR--GSLGSVNQLSVTIGIMLAYLLGLF 196 (336)
Q Consensus 138 ---------------~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~---~-~~r--~~~~~~~~~~~~~g~~~~~~~~~~ 196 (336)
...++....+..+|.|+.-+...++-+|-++ + +.+ ...+.++.....+|..++..+.-+
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vy 216 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVY 216 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 1245556677778999999999999999998 2 222 356777888888888887666544
Q ss_pred c----hhHHHHHHhHHHHHHHHHHh
Q 019729 197 V----NWRVLAVLGVLPCTLLIPGL 217 (336)
Q Consensus 197 ~----~w~~~~~~~~~~~~~~~~~~ 217 (336)
. +|.+-|.+..+..++++++.
T Consensus 217 iq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 217 IQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred hhhcccceeeccHHHHHHHHHHHHH
Confidence 4 89988888777666554443
No 256
>PRK03612 spermidine synthase; Provisional
Probab=97.24 E-value=0.047 Score=51.56 Aligned_cols=120 Identities=18% Similarity=0.121 Sum_probs=69.5
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHH---HHHHHH-H---hhcch-hHHHHHHHH
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNI---IGWLII-S---FSKDS-SFLFMGRLL 147 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~-~---~~~~~-~~~~~~r~l 147 (336)
+.--+|-+....+.+.+++.+|..+|+.+++++.++.-++...+ -..+.. ++..+. . +.... ..++...++
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~-e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 119 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAV-ELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLL 119 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456888888899999999999999999998874433333221 111111 111111 1 11111 122334556
Q ss_pred HHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 148 EGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 148 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
.++..|+..|....+..+... ++-+...|-......+|+++|.++.+++
T Consensus 120 ~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 120 IGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 778888888887776655332 2234556666666677777776666443
No 257
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.15 E-value=0.22 Score=46.51 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=73.3
Q ss_pred hHHHHHHHHHH-HHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh---------cc------------------
Q 019729 86 EFSIFGSLANV-GAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---------KD------------------ 137 (336)
Q Consensus 86 ~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~------------------ 137 (336)
....+-....+ +..+...+..+++++++|.+++-+....+.....++++. ++
T Consensus 59 ~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i 138 (491)
T PF03219_consen 59 VIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFI 138 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHH
Confidence 34444443323 556677788999999999998887766666555555542 11
Q ss_pred ----hhHHHHHHHHHHHHhhhhhh-hHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 138 ----SSFLFMGRLLEGFGVGVISY-TVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 138 ----~~~~~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
.|.+.+.-++.-+-.....+ .-+.+.+|.++.++-.+..+++..+.++|.+++..+...+
T Consensus 139 ~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 139 AMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222222222332233334 4689999999999999999999999999999887776444
No 258
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.12 E-value=0.0032 Score=54.79 Aligned_cols=149 Identities=15% Similarity=0.256 Sum_probs=108.3
Q ss_pred hhccCCchhHH-HHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhh
Q 019729 78 SDLKLTISEFS-IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVIS 156 (336)
Q Consensus 78 ~~~g~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~ 156 (336)
.+.+++..+.. -+.-+..-.+++.-.+.=.+.|-.-.|+++++-.+.......+..+.++.+.+=+.-++.|... ..-
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~t-AaE 112 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPAT-AAE 112 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHH-HHH
Confidence 34566655532 3334445566677777778899998899988888888888888889999988888888888876 456
Q ss_pred hhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc------hhHHHHHHhHHHHHHHHHHhhcccCchhHH
Q 019729 157 YTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 227 (336)
Q Consensus 157 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 227 (336)
.+.++|+-+..+++++.++.+..-...-.|...|..++..+ ++...=.+......+..+..+++|..++-+
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl 189 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSL 189 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhh
Confidence 66788888888999999999998888888888887777655 344444444444455566667777666544
No 259
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.05 E-value=0.0048 Score=55.64 Aligned_cols=108 Identities=23% Similarity=0.130 Sum_probs=77.5
Q ss_pred hccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHHHHHHHhhc----chhHHHHHHHHHHHHhh
Q 019729 79 DLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGR-KGSLMIAAVPNIIGWLIISFSK----DSSFLFMGRLLEGFGVG 153 (336)
Q Consensus 79 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~r~l~G~~~g 153 (336)
.-|.+....|++.....+++.+++.+.|.+.||... |.++++......++.+.....+ +.+.++..-.+.|++..
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~ 374 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGT 374 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhc
Confidence 346666788999999999999999999999999874 6666666666555533222222 23455566778888888
Q ss_pred hhhhhHhHHHHhccCCCcchhHHhHHHHHHHHH
Q 019729 154 VISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIG 186 (336)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 186 (336)
+.+|+..-+-.|..-|..-+...|+.+....+=
T Consensus 375 ~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f 407 (480)
T KOG2563|consen 375 GYLPIGFELGVETTYPVAEGTSSGLLNLSGQIF 407 (480)
T ss_pred CCCCcceeeeeeeccccCCcccceeEEeehhHH
Confidence 899999888888876666677777765544443
No 260
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.05 E-value=0.049 Score=50.02 Aligned_cols=130 Identities=15% Similarity=0.108 Sum_probs=97.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhchh-------HHHHHHHHHHHHHHHHHHhh----------cchhHHHHHHHHH
Q 019729 86 EFSIFGSLANVGAMVGAIASGQIAEYIGRK-------GSLMIAAVPNIIGWLIISFS----------KDSSFLFMGRLLE 148 (336)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~l~ 148 (336)
..+|..+...+.-++.+++..++..|.++| .-+-+++++.+.+.++.... .+.++++..-+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 357888888888899999999888886554 12345555555555544433 2567888899999
Q ss_pred HHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhcc-------c---hhHHHHHHhHHHHHHHHH
Q 019729 149 GFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF-------V---NWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 149 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~-------~---~w~~~~~~~~~~~~~~~~ 215 (336)
++|.=...|+..+++....|++-.+..++.+-.....|..++..++.. . .....|+.++...++..+
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~ 481 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGI 481 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988888777762 1 344566666665555433
No 261
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.95 E-value=0.0015 Score=54.77 Aligned_cols=102 Identities=20% Similarity=0.242 Sum_probs=75.4
Q ss_pred chhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 019729 70 SPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEG 149 (336)
Q Consensus 70 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 149 (336)
.|..-.+.+.+|+.+.+++.+.........+...+.|-++||-|||+.-+.-++.+.++++ .-.++.|-.++++|.+-|
T Consensus 57 gPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGG 135 (454)
T KOG4332|consen 57 GPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGG 135 (454)
T ss_pred CceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhh
Confidence 3444446678899999999888888788888899999999999999975554444444432 334677888999999999
Q ss_pred HHhhhhhhhHhH-HHHhccCCCcchh
Q 019729 150 FGVGVISYTVPV-YIAEIAPQNMRGS 174 (336)
Q Consensus 150 ~~~g~~~~~~~~-~~~~~~~~~~r~~ 174 (336)
+.....+...-+ ++.|.- ++|+.
T Consensus 136 iaTsLLFSaFEsWliaEHn--ekr~F 159 (454)
T KOG4332|consen 136 IATSLLFSAFESWLIAEHN--EKRGF 159 (454)
T ss_pred HHHHHHHHHHHHHHHHHhh--hccCC
Confidence 999888887654 455654 34544
No 262
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.93 E-value=0.0011 Score=61.02 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=63.3
Q ss_pred hhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHH-HHHHHHHHHHHHHhh
Q 019729 58 GPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMI-AAVPNIIGWLIISFS 135 (336)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~~ 135 (336)
.++..+...+...|.++.+.+++|+++++.|.++..--+...++.|++|+++||+-+||.+++ +++....+.++..+.
T Consensus 19 f~~~~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv 97 (618)
T KOG3762|consen 19 FYLFFGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFV 97 (618)
T ss_pred eeeeeeecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeec
Confidence 344455566777888999999999999999999999999999999999999999986665555 456666677776664
No 263
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.74 E-value=0.028 Score=51.58 Aligned_cols=139 Identities=17% Similarity=0.146 Sum_probs=73.6
Q ss_pred HHhhhhhhccccccchhhHhHhhh--ccCCchhHHHHHHHH--HHHHHHHHHH-HHHHHhhhchhHHHHHHH-HHHHHHH
Q 019729 56 ALGPIQFGFTCGYSSPTQAEIISD--LKLTISEFSIFGSLA--NVGAMVGAIA-SGQIAEYIGRKGSLMIAA-VPNIIGW 129 (336)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~--~~~~~~~~~~-~g~l~dr~Grr~~l~~~~-~~~~~~~ 129 (336)
.+.++..|.-.+......|.+.++ -+.|-++.+...-+. +=.-++.+|+ =+..+.|+||||..++=. .+.++..
T Consensus 6 ~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m 85 (544)
T PF13000_consen 6 VLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILM 85 (544)
T ss_pred HHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHH
Confidence 344566777777665567777776 677777765433221 1111233322 234555899999866443 2333333
Q ss_pred HHHHhhc----------------------ch--hHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHH
Q 019729 130 LIISFSK----------------------DS--SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTI 185 (336)
Q Consensus 130 ~~~~~~~----------------------~~--~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 185 (336)
+..+... +. ..+....++.=+..+.-..+.-.+.-....+++++.+......+..+
T Consensus 86 ~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~ 165 (544)
T PF13000_consen 86 LYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTA 165 (544)
T ss_pred HHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhh
Confidence 3333211 00 01222222232333333333334445566778899988888888888
Q ss_pred HHHHHHHhh
Q 019729 186 GIMLAYLLG 194 (336)
Q Consensus 186 g~~~~~~~~ 194 (336)
|.+++..+-
T Consensus 166 Gyfls~tvF 174 (544)
T PF13000_consen 166 GYFLSFTVF 174 (544)
T ss_pred hHHHHHHHH
Confidence 887775543
No 264
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.62 E-value=0.01 Score=53.79 Aligned_cols=119 Identities=15% Similarity=0.121 Sum_probs=71.0
Q ss_pred hhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhch-------hHHHHHHHH----HHHHHHHHHHhh-cchhHHHHHH
Q 019729 78 SDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGR-------KGSLMIAAV----PNIIGWLIISFS-KDSSFLFMGR 145 (336)
Q Consensus 78 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-------r~~l~~~~~----~~~~~~~~~~~~-~~~~~~~~~r 145 (336)
+-.|.+.++..++..++..++.+|.+++|.++||+.| .+.=.+... +.+...++.... .+...+....
T Consensus 276 ~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il 355 (493)
T KOG1330|consen 276 ELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLIL 355 (493)
T ss_pred HHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 3346676777888999999999999999999999543 221111111 111122222222 2233334445
Q ss_pred HHHHHHh-hhhhhhHhHHHHhccCCCcchhHHhHHHHH-HHHHHHHHHHhhcc
Q 019729 146 LLEGFGV-GVISYTVPVYIAEIAPQNMRGSLGSVNQLS-VTIGIMLAYLLGLF 196 (336)
Q Consensus 146 ~l~G~~~-g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~ 196 (336)
++.|... ...++....+..|..|+++|..+.++-... ..+|.+-+|.+.+.
T Consensus 356 ~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGi 408 (493)
T KOG1330|consen 356 FLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGI 408 (493)
T ss_pred HHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehh
Confidence 5555533 345556677788999999999999985544 44455555534433
No 265
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.10 E-value=1.1 Score=41.28 Aligned_cols=126 Identities=11% Similarity=0.076 Sum_probs=88.2
Q ss_pred hhHhHhhhccCC---chhHHHHHHHHHH-HHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh---------cc-
Q 019729 72 TQAEIISDLKLT---ISEFSIFGSLANV-GAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---------KD- 137 (336)
Q Consensus 72 ~~~~~~~~~g~s---~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~- 137 (336)
.+-.+++.+.++ +....++-+..-+ +..+..++.++++++..+.+++-+.+..+....+++++. ++
T Consensus 45 ~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~ 124 (509)
T COG3202 45 LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDP 124 (509)
T ss_pred HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCH
Confidence 344466766554 3445666666666 778889999999999999999888877777777776652 11
Q ss_pred ----------------------hhHHHHHHHHHHHHhhhhhh-hHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh
Q 019729 138 ----------------------SSFLFMGRLLEGFGVGVISY-TVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 138 ----------------------~~~~~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
.|...+...+.=+-...... .-+.+.+|.+..++-.+..++++.+.+++..++..+.
T Consensus 125 ~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~ 204 (509)
T COG3202 125 EFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVT 204 (509)
T ss_pred HHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 02222222222232233333 5678899999999999999999999999999888777
Q ss_pred ccc
Q 019729 195 LFV 197 (336)
Q Consensus 195 ~~~ 197 (336)
..+
T Consensus 205 ~~~ 207 (509)
T COG3202 205 SWL 207 (509)
T ss_pred HHH
Confidence 655
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.83 E-value=0.16 Score=46.90 Aligned_cols=127 Identities=9% Similarity=-0.020 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHH-HHh----h---cchhHHHHHHHHHHHHhhhhhhhHhHHHH
Q 019729 93 LANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLI-ISF----S---KDSSFLFMGRLLEGFGVGVISYTVPVYIA 164 (336)
Q Consensus 93 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~~~----~---~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 164 (336)
...+..++..+....+..|+..|.=+..++++..+..++ ..+ . ..++..++.-++.|++.+........+.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 444445555555556666666433233343322222211 111 1 13455566677888888888888877776
Q ss_pred hccCCCcchhHHhHHHHHHHHHHHHHHHhh-------cc---chhH--HHHHHhHHHHHHHHHHhhcccCch
Q 019729 165 EIAPQNMRGSLGSVNQLSVTIGIMLAYLLG-------LF---VNWR--VLAVLGVLPCTLLIPGLFFIPESP 224 (336)
Q Consensus 165 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~-------~~---~~w~--~~~~~~~~~~~~~~~~~~~~~e~~ 224 (336)
.+|++. ++.+..+.+++++++..+. .- ..++ ..|.+..++.+++++....++..|
T Consensus 133 -~fp~~~----~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~~a~~v~l~~i~~~~~l~k~~ 199 (437)
T TIGR00939 133 -VFPSTY----SSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFGTPCVVQLICIVCYLLLPKLP 199 (437)
T ss_pred -cCCHHH----HHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHHHHHHHHHHHHHHHHHHhcCH
Confidence 566543 3333444444443333222 11 2122 344445555666666666667666
No 267
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.82 E-value=0.4 Score=43.23 Aligned_cols=86 Identities=13% Similarity=0.062 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-----hhHHHHHHhHHHHHH
Q 019729 138 SSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTL 212 (336)
Q Consensus 138 ~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~ 212 (336)
+...++.-.+.|++.|..........++ +|++.-...++-.+.++.+-+.+.-..-... +=...|.+..+..++
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~ll 195 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTVILLL 195 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHHHHHH
Confidence 4555666777888887777777776664 5555444433333322222222111111111 222456666666777
Q ss_pred HHHHhhcccCch
Q 019729 213 LIPGLFFIPESP 224 (336)
Q Consensus 213 ~~~~~~~~~e~~ 224 (336)
+++++..+|..|
T Consensus 196 C~i~y~~l~~lp 207 (406)
T KOG1479|consen 196 CFVLYLVLPKLP 207 (406)
T ss_pred HHHHHHHhhcch
Confidence 777766777776
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.81 E-value=0.18 Score=46.60 Aligned_cols=106 Identities=16% Similarity=0.192 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchh--HHHHHHH--HHHHHHHHHHHhh---------cchhHHHHHHHHHHHHhhh
Q 019729 88 SIFGSLANVGAMVGAIASGQIAEYIGRK--GSLMIAA--VPNIIGWLIISFS---------KDSSFLFMGRLLEGFGVGV 154 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~--~~~~~~~~~~~~~---------~~~~~~~~~r~l~G~~~g~ 154 (336)
-....+++++-.+|..+..+.. .-++| ++++.+. ++..-..++|..- ++-+..++.-++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4566777777777777554321 11222 3333222 2222222333322 3556677789999999999
Q ss_pred hhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh
Q 019729 155 ISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 155 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
..+....+..+..++++|..+..+...+..+|..+|..++
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888888888887764
No 269
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.19 E-value=0.48 Score=43.03 Aligned_cols=94 Identities=12% Similarity=0.082 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHH--HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHH
Q 019729 87 FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLM--IAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIA 164 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 164 (336)
-|.+.++..+.+.++.+..|++..++.+-.-+. ...++.+...++++..++.+..+++-++.+.......++...-++
T Consensus 287 NG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA 366 (412)
T PF01770_consen 287 NGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIA 366 (412)
T ss_pred chHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478888889999999999999977777644444 344555666777888899999988888888877777777777777
Q ss_pred hccCCCcchhHHhHHH
Q 019729 165 EIAPQNMRGSLGSVNQ 180 (336)
Q Consensus 165 ~~~~~~~r~~~~~~~~ 180 (336)
.....+.-+...|+..
T Consensus 367 ~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 367 KNLSEERYALVFGINT 382 (412)
T ss_pred HhccccceeeeeeeHH
Confidence 7776666666665544
No 270
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.07 E-value=0.042 Score=50.77 Aligned_cols=66 Identities=14% Similarity=0.146 Sum_probs=50.9
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHH
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCT 211 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~ 211 (336)
++.|.+.-.......++-+|...+++++...++++.....+.+++|.+.... |.|+...+.+...+
T Consensus 396 ~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l 465 (488)
T KOG2325|consen 396 VVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLL 465 (488)
T ss_pred heeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHH
Confidence 4556666556667788899999999999999999999999999999888554 66666665444433
No 271
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.97 E-value=0.0067 Score=57.43 Aligned_cols=133 Identities=15% Similarity=0.170 Sum_probs=0.0
Q ss_pred cccccchhhHh-HhhhccCCchhHHHHHHHHHH-HHHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHHHHHHH---h--h
Q 019729 65 TCGYSSPTQAE-IISDLKLTISEFSIFGSLANV-GAMVGAIASGQIAEYIG--RKGSLMIAAVPNIIGWLIIS---F--S 135 (336)
Q Consensus 65 ~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~---~--~ 135 (336)
....+....|. ++.+|+.++++++.+..+..+ +.++|.+++|++..|+. .|..+.+..+...++.+... + .
T Consensus 320 ~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C 399 (539)
T PF03137_consen 320 IVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGC 399 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecC
Confidence 33334444554 566799999999888766655 77899999999999984 45555555444444433311 0 0
Q ss_pred c---------c----------------------------------------hhHHHHHHHHHHHHhhhhhhhHhHHHHhc
Q 019729 136 K---------D----------------------------------------SSFLFMGRLLEGFGVGVISYTVPVYIAEI 166 (336)
Q Consensus 136 ~---------~----------------------------------------~~~~~~~r~l~G~~~g~~~~~~~~~~~~~ 166 (336)
+ . ...+++..++.-+..+.........+-+.
T Consensus 400 ~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~ 479 (539)
T PF03137_consen 400 PNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRC 479 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeecc
Confidence 0 0 11233333333344444455555555667
Q ss_pred cCCCcchhHHhHHHHH-HHHHHHHHHHhhccc
Q 019729 167 APQNMRGSLGSVNQLS-VTIGIMLAYLLGLFV 197 (336)
Q Consensus 167 ~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~~ 197 (336)
.|+++|+.++|+.... ..+|.+-+|++-+.+
T Consensus 480 V~~~~rs~AlGv~~~~~rllg~IPgPIifG~i 511 (539)
T PF03137_consen 480 VPPEQRSFALGVQWLIIRLLGFIPGPIIFGAI 511 (539)
T ss_dssp --------------------------------
T ss_pred CChhhcchhhhHHHHHHHhhcCcchHHHHhHH
Confidence 7777888887775433 445666666665443
No 272
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.95 E-value=0.069 Score=51.88 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=46.6
Q ss_pred hhHh-HhhhccCCchhHHHHHHHHHH-HHHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHHHHH
Q 019729 72 TQAE-IISDLKLTISEFSIFGSLANV-GAMVGAIASGQIAEYIG--RKGSLMIAAVPNIIGWLI 131 (336)
Q Consensus 72 ~~~~-~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~ 131 (336)
.+|. +++.+|+++.+++++.+...+ +.+++.+++|+++||++ .|+.+.++.++..++.++
T Consensus 352 ~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 352 FLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 4444 456799999999999887766 67899999999999998 567777777666666544
No 273
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=93.90 E-value=0.28 Score=42.78 Aligned_cols=73 Identities=14% Similarity=0.231 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccC
Q 019729 95 NVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAP 168 (336)
Q Consensus 95 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~ 168 (336)
.+.....+.+.+.+..++|-|+++.++...+..... .-+-+.+..++....+.|++.+..+..-.+|+++.-.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 344556677777999999999999988877754322 1223567788888999999999888887777776653
No 274
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.73 E-value=0.87 Score=41.14 Aligned_cols=107 Identities=14% Similarity=0.150 Sum_probs=74.4
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhchhHHHHHHH-HHHHHHHHHHHh-------hcchhHHHHHHHHHHHHhhhhhh
Q 019729 87 FSIFGSL-ANVGAMVGAIASGQIAEYIGRKGSLMIAA-VPNIIGWLIISF-------SKDSSFLFMGRLLEGFGVGVISY 157 (336)
Q Consensus 87 ~~~~~~~-~~~~~~~~~~~~g~l~dr~Grr~~l~~~~-~~~~~~~~~~~~-------~~~~~~~~~~r~l~G~~~g~~~~ 157 (336)
...+... +++...+|.+.+.++-++= ||+..+... =...+..+.+.. -.+-+++++.-.+.|+..|-...
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlts 362 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTS 362 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhh
Confidence 3445555 8888888877777766553 444333332 222233332221 34567788899999999999999
Q ss_pred hHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh
Q 019729 158 TVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 158 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
....+..+-.|++++..+..+.......|...|..++
T Consensus 363 l~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 363 LIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred heehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999999999999998888888888888777776654
No 275
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=92.04 E-value=0.053 Score=47.66 Aligned_cols=105 Identities=18% Similarity=0.230 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hchhHHHHHHH--HHHHHHHHHHH----------hhcchhHHHHHHHHHHHHhhhhh
Q 019729 90 FGSLANVGAMVGAIASGQIAEY-IGRKGSLMIAA--VPNIIGWLIIS----------FSKDSSFLFMGRLLEGFGVGVIS 156 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~--~~~~~~~~~~~----------~~~~~~~~~~~r~l~G~~~g~~~ 156 (336)
...+++++-.+|..+.++..-+ -.+|+..+.+. ++..-..++|. +.++-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4567888888888887764321 13454444322 22222222221 12344667778899999999999
Q ss_pred hhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh
Q 019729 157 YTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 157 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
+....+..+..++++|..+..+...+..+|..+|..++
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp HHHH----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888888888887777665
No 276
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=90.26 E-value=0.32 Score=42.04 Aligned_cols=110 Identities=19% Similarity=0.130 Sum_probs=74.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhchhHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHH
Q 019729 86 EFSIFGSLANVGAMVGAIASGQIAEYIGRKGS---LMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVY 162 (336)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~ 162 (336)
+.-|....+.+|-.+..--.-..--+ .-+. +.+-..++.+.-.+..+.++++..++.-+.-|+-.|..+.-..--
T Consensus 289 qYRwyqvlYQlGVFiSRSS~~~~~~p--~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~ 366 (409)
T KOG3880|consen 289 QYRWYQVLYQLGVFISRSSINLFTMP--YLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHN 366 (409)
T ss_pred cchhhheeeeeeEEEEeccceEEech--HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHH
Confidence 46788888777654432211111000 1111 122223333444455567888888888899999888888888777
Q ss_pred HHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 163 IAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 163 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
+.+-.++++|-.+++....+-.+|..++..++-.+
T Consensus 367 i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 367 IHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 88878889999999999999999999998887555
No 277
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=89.52 E-value=6.7 Score=36.69 Aligned_cols=96 Identities=11% Similarity=0.025 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhch--hHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHh
Q 019729 88 SIFGSLANVGAMVGAIASGQIAEYIGR--KGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAE 165 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~g~l~dr~Gr--r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~ 165 (336)
|.+-++..+.+.+.++..|++-.++.+ ...+.+..++.+...++++.++|.+..+++.++.+.......++...-++.
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~ 380 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIAS 380 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777778888899999999777754 234445556666677788889999999999999999998999999999998
Q ss_pred ccCCCcchhHHhHHHHHH
Q 019729 166 IAPQNMRGSLGSVNQLSV 183 (336)
Q Consensus 166 ~~~~~~r~~~~~~~~~~~ 183 (336)
....+.-|...|+.+...
T Consensus 381 ~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 381 SLSKELCALVFGINTFVA 398 (511)
T ss_pred HhcccceEEEEecHHHHH
Confidence 888777788888765443
No 278
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.06 E-value=1.8 Score=30.78 Aligned_cols=22 Identities=9% Similarity=0.049 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 019729 91 GSLANVGAMVGAIASGQIAEYI 112 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~g~l~dr~ 112 (336)
.+.-+++..+.....||+.|||
T Consensus 48 lssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3445566667777889999997
No 279
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=86.81 E-value=8.1 Score=34.40 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhH--HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHh
Q 019729 88 SIFGSLANVGAMVGAIASGQIAEYIGRKG--SLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAE 165 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~ 165 (336)
|..-++..+.++++.+..|++.-++.|.. .+.++.+..+...++++.+++.|..+++.++.+.......++...-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 56667778888899999999988877653 4445556666677778888898888888888888777888888888888
Q ss_pred ccCCCcchhHHhHHHHH
Q 019729 166 IAPQNMRGSLGSVNQLS 182 (336)
Q Consensus 166 ~~~~~~r~~~~~~~~~~ 182 (336)
....+.-|...|+....
T Consensus 354 nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV 370 (433)
T ss_pred hhhhhhheeeeehHHHH
Confidence 88877778877775543
No 280
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=85.80 E-value=0.64 Score=42.48 Aligned_cols=78 Identities=6% Similarity=-0.073 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHh
Q 019729 88 SIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAE 165 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~ 165 (336)
.|=..++.+...+.+...-++++|+|-|+.+..+...+.++..+.+..++.......+...|+-.+....+.+..+++
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~ 412 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALAL 412 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHH
Confidence 455677777888999999999999997776666666666777677777777777777777775554444444444443
No 281
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.22 E-value=19 Score=31.03 Aligned_cols=129 Identities=13% Similarity=0.084 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchh--HHHHHHHHHHHHHHHHHHh----hc---chhHHHHHHHHHHHHhhhhhh
Q 019729 87 FSIFGSLANVGAMVGAIASGQIAEYIGRK--GSLMIAAVPNIIGWLIISF----SK---DSSFLFMGRLLEGFGVGVISY 157 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~----~~---~~~~~~~~r~l~G~~~g~~~~ 157 (336)
-|.+.+.+.++..+|+-+...+..|-..| ..+.+...+.++...+... ++ +...-+++.++.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 47788888888889888888777765443 2333443333333322222 22 122335556666778899999
Q ss_pred hHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHH----HhhccchhHHHHHHhHHHHHHHHH
Q 019729 158 TVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAY----LLGLFVNWRVLAVLGVLPCTLLIP 215 (336)
Q Consensus 158 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~----~~~~~~~w~~~~~~~~~~~~~~~~ 215 (336)
....+-+++.|.+.|+..+.++-.-..+-.-++- .-+...+-|..|-++.++..+..+
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHH
Confidence 9999999999999999988876543332222111 111223677888888777665533
No 282
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=84.65 E-value=2.5 Score=41.38 Aligned_cols=60 Identities=17% Similarity=0.227 Sum_probs=41.9
Q ss_pred hhHh-HhhhccCCchhHHHHHHHH-HHHHHHHHHHHHHHHhhh--chhHHHHHHHHHHHHHHHH
Q 019729 72 TQAE-IISDLKLTISEFSIFGSLA-NVGAMVGAIASGQIAEYI--GRKGSLMIAAVPNIIGWLI 131 (336)
Q Consensus 72 ~~~~-~~~~~g~s~~~~~~~~~~~-~~~~~~~~~~~g~l~dr~--Grr~~l~~~~~~~~~~~~~ 131 (336)
.+|. +.++||.+.+.+..+.... ..+.++|.+++|++..|+ +.|....+.++...+..+.
T Consensus 414 FlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 414 FLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLF 477 (735)
T ss_pred hhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHH
Confidence 4444 5678999999998887544 446678999999999987 4566655555555444443
No 283
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=83.90 E-value=28 Score=30.25 Aligned_cols=145 Identities=19% Similarity=0.231 Sum_probs=73.8
Q ss_pred hhHHHHHHHHHhhhhhhccccccchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh---hchhHHHHHHHH
Q 019729 47 SVVFCVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEY---IGRKGSLMIAAV 123 (336)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~Grr~~l~~~~~ 123 (336)
++....+.+.++++..-+..+..+..+..+.+..+...+..++..+.. ...++..-.++ ||.||.=+++.+
T Consensus 22 r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~------A~~~a~r~~~~~~TfGy~R~eiLaa~ 95 (296)
T COG1230 22 RRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALI------AIKLARRPATKRFTFGYKRLEILAAF 95 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHH------HHHHhcCCCCCCCCccHhHHHHHHHH
Confidence 334444444444444444445555555667777776666555544442 22223333333 787777676666
Q ss_pred HHHHHHHHHHhh---------------cchhHHHHHHHHHHHHhhhhhhhHhHHHHhcc--CCCcchhHHhH-HHHHHHH
Q 019729 124 PNIIGWLIISFS---------------KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIA--PQNMRGSLGSV-NQLSVTI 185 (336)
Q Consensus 124 ~~~~~~~~~~~~---------------~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~--~~~~r~~~~~~-~~~~~~~ 185 (336)
..++..+..++. ++..++ .-.+.|+... ..... .+.+-- ..+.|+...-. -...+++
T Consensus 96 ~nav~Li~~s~~I~~EAi~R~~~P~~i~~~~ml--~va~~GL~vN--~~~a~-ll~~~~~~~lN~r~a~LHvl~D~Lgsv 170 (296)
T COG1230 96 LNALLLIVVSLLILWEAIQRLLAPPPIHYSGML--VVAIIGLVVN--LVSAL-LLHKGHEENLNMRGAYLHVLGDALGSV 170 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccchH--HHHHHHHHHH--HHHHH-HhhCCCcccchHHHHHHHHHHHHHHHH
Confidence 666555544431 111222 2223333221 11111 111110 13445554443 5577888
Q ss_pred HHHHHHHhhccchhHHH
Q 019729 186 GIMLAYLLGLFVNWRVL 202 (336)
Q Consensus 186 g~~~~~~~~~~~~w~~~ 202 (336)
|.+++..+..+.+|.|.
T Consensus 171 ~vIia~i~i~~~~w~~~ 187 (296)
T COG1230 171 GVIIAAIVIRFTGWSWL 187 (296)
T ss_pred HHHHHHHHHHHhCCCcc
Confidence 88888888888888874
No 284
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=82.47 E-value=25 Score=28.70 Aligned_cols=25 Identities=28% Similarity=0.161 Sum_probs=16.0
Q ss_pred HHhHHHHHHHHHHHHHHHhhccchh
Q 019729 175 LGSVNQLSVTIGIMLAYLLGLFVNW 199 (336)
Q Consensus 175 ~~~~~~~~~~~g~~~~~~~~~~~~w 199 (336)
.....-.++.+|.+++..+....+.
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4444556666777777777666664
No 285
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=81.85 E-value=2 Score=36.29 Aligned_cols=51 Identities=16% Similarity=0.240 Sum_probs=33.8
Q ss_pred CcchhHHhHHHHHHHHHHHHH--HHhhc-----cc--hhHHHHHHhHHHHHHHHHHhhcc
Q 019729 170 NMRGSLGSVNQLSVTIGIMLA--YLLGL-----FV--NWRVLAVLGVLPCTLLIPGLFFI 220 (336)
Q Consensus 170 ~~r~~~~~~~~~~~~~g~~~~--~~~~~-----~~--~w~~~~~~~~~~~~~~~~~~~~~ 220 (336)
|+|+........+.++|.++. |.+.. .+ +|++.+.+.+++.++.++....+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566777777777778887765 33332 11 79999988887777666655443
No 286
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=81.37 E-value=30 Score=30.95 Aligned_cols=85 Identities=14% Similarity=0.063 Sum_probs=55.5
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHH-----HHHHHhh----cchhHHHHHHHHHHHH
Q 019729 81 KLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIG-----WLIISFS----KDSSFLFMGRLLEGFG 151 (336)
Q Consensus 81 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~-----~~~~~~~----~~~~~~~~~r~l~G~~ 151 (336)
|-..-+.+.+.+.+.....+|+...-++.|.--.-+.+.+-+++..++ .+-..|+ ++-+.+++..+++|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 545567888999999999999988887777543332222222221111 1111222 3556778888999999
Q ss_pred hhhhhhhHhHHHHh
Q 019729 152 VGVISYTVPVYIAE 165 (336)
Q Consensus 152 ~g~~~~~~~~~~~~ 165 (336)
.|.-.|....++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999998888776
No 287
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=81.02 E-value=14 Score=27.02 Aligned_cols=42 Identities=14% Similarity=0.462 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHH
Q 019729 87 FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIG 128 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 128 (336)
.+.......++..++..+.+.+.|..|.+..+.+......++
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 456666777777888888888888877766655544444333
No 288
>PF12832 MFS_1_like: MFS_1 like family
Probab=80.94 E-value=3.8 Score=27.53 Aligned_cols=39 Identities=5% Similarity=0.104 Sum_probs=30.4
Q ss_pred HHHhhchHHHHHhHHHHHHhcCCCCcchhHHHHHHHHhh
Q 019729 293 LQQLSGINGVLFYSSNIFANAGKINISLDVILPIVEALN 331 (336)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~g 331 (336)
+..+.+...+.-|.|.++++.|+++.+.+.+.++..++.
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~ 48 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIR 48 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHH
Confidence 334444567778899999999999999999988776654
No 289
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=78.63 E-value=28 Score=26.92 Aligned_cols=51 Identities=16% Similarity=0.124 Sum_probs=34.4
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHH
Q 019729 137 DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLA 190 (336)
Q Consensus 137 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 190 (336)
++..+++...+.|+| ...+.+.+++-.+++++-|...|+-.+-.+++-+.-
T Consensus 96 ~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred chHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 444455445554443 345566777778888989999999888777766543
No 290
>PRK10263 DNA translocase FtsK; Provisional
Probab=77.95 E-value=40 Score=35.59 Aligned_cols=22 Identities=27% Similarity=0.394 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhch
Q 019729 93 LANVGAMVGAIASGQIAEYIGR 114 (336)
Q Consensus 93 ~~~~~~~~~~~~~g~l~dr~Gr 114 (336)
+.+.++.+|..+...+..-||-
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhH
Confidence 4556677777777777777774
No 291
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=77.48 E-value=3.2 Score=36.18 Aligned_cols=127 Identities=7% Similarity=0.067 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh--chhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHh
Q 019729 88 SIFGSLANVGAMVGAIASGQIAEYI--GRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAE 165 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~ 165 (336)
|.+.-+-.+=.++..+.+.++.||+ |.|. .+..++.+.+.++.+++++.++-+.+-.+..++.|..-...-.+. .
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ls-s 141 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRI--ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALS-S 141 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHH--HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhh-c
Confidence 4444444556667777888889886 5553 455666777788888899988888888887777765444333332 2
Q ss_pred ccCCCcchhHHhHHHHHHHHHHHHHHH----hhc--cchhHHHHHHhHHH-HHHHHHHhhccc
Q 019729 166 IAPQNMRGSLGSVNQLSVTIGIMLAYL----LGL--FVNWRVLAVLGVLP-CTLLIPGLFFIP 221 (336)
Q Consensus 166 ~~~~~~r~~~~~~~~~~~~~g~~~~~~----~~~--~~~w~~~~~~~~~~-~~~~~~~~~~~~ 221 (336)
.++ ....+.+..+.+.++.+|.. +.. .++.|...++...+ ++.++..++.++
T Consensus 142 ~Y~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 142 RYP----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred cCC----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 333 23333343333333333322 222 12556555555444 444444444443
No 292
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=75.18 E-value=52 Score=28.09 Aligned_cols=101 Identities=18% Similarity=0.192 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-hchhHHHH----HHHHHHHHHHHHH-Hhhc----chhHHHHHHHHHHHHhhhhhh
Q 019729 88 SIFGSLANVGAMVGAIASGQIAEY-IGRKGSLM----IAAVPNIIGWLII-SFSK----DSSFLFMGRLLEGFGVGVISY 157 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~----~~~~~~~~~~~~~-~~~~----~~~~~~~~r~l~G~~~g~~~~ 157 (336)
....-++..|..+|.+..|.+... +-||+.+. .+.++.++..+.. .... +...+++..++.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344445555666666666766653 34555443 2233333333331 1111 345677778888887655555
Q ss_pred hHhHHHHhccCCCcchhHHhHHHHHHHHHHHH
Q 019729 158 TVPVYIAEIAPQNMRGSLGSVNQLSVTIGIML 189 (336)
Q Consensus 158 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 189 (336)
+.-.+=.|. +...+.+..-.+...+++|-++
T Consensus 224 ViL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 VILNLPHEY-KGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHhcChhhh-cCCCcceehhHHHHHHHHHHHH
Confidence 543333332 2222222222344445555443
No 293
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=68.51 E-value=1.1e+02 Score=29.02 Aligned_cols=47 Identities=15% Similarity=0.249 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHH
Q 019729 141 LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGI 187 (336)
Q Consensus 141 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 187 (336)
+++.-++..+..-..+....++-+.+.+|..=|+.+.+.+...++|+
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGG 454 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGG 454 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCC
Confidence 33345666677777888888999999999999999999998888764
No 294
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=68.45 E-value=1.6 Score=38.26 Aligned_cols=74 Identities=22% Similarity=0.257 Sum_probs=0.0
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh---cc----chhH--HHHHHhHHHHHHHHHH
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG---LF----VNWR--VLAVLGVLPCTLLIPG 216 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~---~~----~~w~--~~~~~~~~~~~~~~~~ 216 (336)
++.|++.+........+.+. +|++... .+..+.++++++...+. .. ..+. ..|.+..++.+++++.
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y~~----a~~~Gq~~aGv~~s~l~ii~~~~~~~~~~~a~~yF~~a~~i~i~~~~~ 79 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKYTQ----AVMIGQGLAGVIVSLLRIITKASGSDVKTSAFIYFIIAVLIVILCIIL 79 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHHHH----HHHhhccHHHHHHHHHHHHHHHhhhccchhhhhHHHHHHHHHHHHHHH
Confidence 34566666666666666664 6654433 23333334333332222 11 1222 3344444455555555
Q ss_pred hhcccCch
Q 019729 217 LFFIPESP 224 (336)
Q Consensus 217 ~~~~~e~~ 224 (336)
.+.++..|
T Consensus 80 ~~~l~~~~ 87 (309)
T PF01733_consen 80 YFILPRSP 87 (309)
T ss_dssp --------
T ss_pred HHHhccCh
Confidence 55666555
No 295
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=64.93 E-value=15 Score=31.09 Aligned_cols=24 Identities=21% Similarity=0.026 Sum_probs=13.8
Q ss_pred hHHHHHHhHHHHHHHHHHhhcccC
Q 019729 199 WRVLAVLGVLPCTLLIPGLFFIPE 222 (336)
Q Consensus 199 w~~~~~~~~~~~~~~~~~~~~~~e 222 (336)
..+.-+++.++.++...+..+++.
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeecC
Confidence 335555666666666666656543
No 296
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=61.86 E-value=9.5 Score=31.53 Aligned_cols=96 Identities=16% Similarity=0.145 Sum_probs=58.2
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVI 155 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 155 (336)
+.+.||++..+.-=+.++|.+|..+|.++++.++-- +..+. ...-...-.-.|.|.|.+
T Consensus 130 I~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~-------------------~a~~~--~fhP~ALAMasGvGSgSM 188 (241)
T PF11299_consen 130 ISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASL-------------------LASLG--IFHPYALAMASGVGSGSM 188 (241)
T ss_pred eehhcCCCCccccceEEEeeehhhHHHHHHHHHHHH-------------------HHhcc--CCCHHHHHHHcCCcHHHH
Confidence 566777776666556777777777777776665531 11111 111122334467888888
Q ss_pred hhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHh
Q 019729 156 SYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL 193 (336)
Q Consensus 156 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 193 (336)
.+....-+.+.+| +......++......+....|..+
T Consensus 189 MaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 189 MAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred HHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888887 555666666555555555444433
No 297
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=60.46 E-value=82 Score=29.27 Aligned_cols=99 Identities=13% Similarity=0.066 Sum_probs=64.4
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGV 152 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~ 152 (336)
+....+++.++...+.+...+...++.++.-....++|-|-....+.-...++.+...... .....+.+-+..|+..
T Consensus 40 vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~ 119 (451)
T COG2233 40 VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVY 119 (451)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence 5677999999999999999999999999887755445656555555544444444443332 2555555555555554
Q ss_pred hhhhhhHhH-HHHhccCCCcchhH
Q 019729 153 GVISYTVPV-YIAEIAPQNMRGSL 175 (336)
Q Consensus 153 g~~~~~~~~-~~~~~~~~~~r~~~ 175 (336)
... ..... .+...+||-.-|..
T Consensus 120 ~li-~~~~~~~l~rlfPPvVtG~V 142 (451)
T COG2233 120 FLI-SPIVKIRLARLFPPVVTGPV 142 (451)
T ss_pred HHH-HHHHHHHHHHhCCCceEEeE
Confidence 332 22333 77788888776653
No 298
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=57.75 E-value=73 Score=31.38 Aligned_cols=79 Identities=18% Similarity=0.166 Sum_probs=56.3
Q ss_pred hhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc--hhH--HHHHHhHHHHHHH
Q 019729 138 SSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV--NWR--VLAVLGVLPCTLL 213 (336)
Q Consensus 138 ~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~w~--~~~~~~~~~~~~~ 213 (336)
.++.+.--++.+.+.........-+--+-.|+..|....+++....++|.++...+...- .++ -.+.+.++..++.
T Consensus 565 ~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (654)
T TIGR00926 565 ILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFENFSVQAAEFFLFASLMLVVM 644 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHH
Confidence 445566667778888777777777777888999999999999999999999998887543 344 3344444444444
Q ss_pred HHH
Q 019729 214 IPG 216 (336)
Q Consensus 214 ~~~ 216 (336)
+++
T Consensus 645 ~~f 647 (654)
T TIGR00926 645 AIF 647 (654)
T ss_pred HHH
Confidence 443
No 299
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=56.92 E-value=62 Score=29.08 Aligned_cols=80 Identities=13% Similarity=0.049 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcc------hhHHHHHHHHHHHHhhhhhhhHh
Q 019729 87 FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKD------SSFLFMGRLLEGFGVGVISYTVP 160 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~G~~~g~~~~~~~ 160 (336)
..++.+...+..++-+.+.+ .||+...|++.+.. ...|.++.....+ .+.=....-+.++..+..+++..
T Consensus 188 ~TilSStSs~FtL~la~if~--~e~ft~sKllav~~--si~GViiVt~~~s~~~~~~~a~~~llG~llaL~sA~~YavY~ 263 (416)
T KOG2765|consen 188 TTILSSTSSFFTLFLAAIFP--VERFTLSKLLAVFV--SIAGVIIVTMGDSKQNSDLPASRPLLGNLLALLSALLYAVYT 263 (416)
T ss_pred hhhhhhcchHHHHHHHHHcC--cchhhHHHHHHHHH--hhccEEEEEeccccccccCCccchhHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555 89999888655433 3333333222211 11111122333344455566666
Q ss_pred HHHHhccCCC
Q 019729 161 VYIAEIAPQN 170 (336)
Q Consensus 161 ~~~~~~~~~~ 170 (336)
.++..-.+.+
T Consensus 264 vllk~~~~~e 273 (416)
T KOG2765|consen 264 VLLKRKIGDE 273 (416)
T ss_pred HHHHhhcccc
Confidence 6666555544
No 300
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=56.86 E-value=1.8e+02 Score=27.46 Aligned_cols=68 Identities=16% Similarity=0.123 Sum_probs=45.1
Q ss_pred HHHHHHHhhhhhhhHhHHHHhccCC-CcchhHHhHHHHHHHHHHHHHHHhhccc----hhHHHHHHhHHHHHH
Q 019729 145 RLLEGFGVGVISYTVPVYIAEIAPQ-NMRGSLGSVNQLSVTIGIMLAYLLGLFV----NWRVLAVLGVLPCTL 212 (336)
Q Consensus 145 r~l~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~ 212 (336)
-++.|+.........-..+.+.+|. ++|...+|-++...++..++...+++.+ ||.....+.-++.++
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4456666667777777888888864 5677888888777777665555554333 888766665444443
No 301
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=56.31 E-value=1.2e+02 Score=27.85 Aligned_cols=100 Identities=10% Similarity=0.049 Sum_probs=54.7
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVI 155 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 155 (336)
+.... +++++...+.+...+...++.++-+....+.-|-+...-..+.+....+......++......-++.|+.....
T Consensus 29 v~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll 107 (415)
T TIGR00801 29 VGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTLL 107 (415)
T ss_pred Hhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 34456 88889999999999999999999988776541112222222122212222222223444444444445443322
Q ss_pred hh----hHhHHHHhccCCCcchhHH
Q 019729 156 SY----TVPVYIAEIAPQNMRGSLG 176 (336)
Q Consensus 156 ~~----~~~~~~~~~~~~~~r~~~~ 176 (336)
.. .....+.+.+|+...+...
T Consensus 108 ~~~~~~~~~~~i~~~~Pp~v~g~iv 132 (415)
T TIGR00801 108 SLLIKKLGPRWLMKLFPPVVTGPVV 132 (415)
T ss_pred HHHHHHhhHHHHHhcCCchhHHHhH
Confidence 22 1234557788888777633
No 302
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=53.86 E-value=1.4e+02 Score=27.45 Aligned_cols=97 Identities=11% Similarity=0.061 Sum_probs=57.8
Q ss_pred hhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHhhhh
Q 019729 77 ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF-SKDSSFLFMGRLLEGFGVGVI 155 (336)
Q Consensus 77 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~g~~ 155 (336)
.+..|++.++...+.+...+...++.++-.+-.-++|.|..+..+.....+....... ...+...+..-++.|+..-..
T Consensus 20 ~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~ill 99 (406)
T TIGR03173 20 GGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVILL 99 (406)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3456999888888888888888888887753333577777776665443333322222 223444444555555543222
Q ss_pred hhhHhHHHHhccCCCcchh
Q 019729 156 SYTVPVYIAEIAPQNMRGS 174 (336)
Q Consensus 156 ~~~~~~~~~~~~~~~~r~~ 174 (336)
. .....+.+.+|+...|.
T Consensus 100 g-~~~~~l~~~iPp~v~G~ 117 (406)
T TIGR03173 100 A-PFFSKLVRFFPPVVTGT 117 (406)
T ss_pred H-HHHHHHHHHCCcHHHHH
Confidence 2 34556778888766554
No 303
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=51.67 E-value=26 Score=25.73 Aligned_cols=13 Identities=23% Similarity=0.092 Sum_probs=8.5
Q ss_pred HHHhhcccCchhH
Q 019729 214 IPGLFFIPESPRW 226 (336)
Q Consensus 214 ~~~~~~~~e~~~~ 226 (336)
+++++.+|+.|..
T Consensus 57 i~l~~~lp~~P~~ 69 (118)
T PRK10697 57 IILSFALDPMPDN 69 (118)
T ss_pred HHHHHhccCCccc
Confidence 5566678877753
No 304
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=50.89 E-value=2.6e+02 Score=27.89 Aligned_cols=45 Identities=18% Similarity=0.146 Sum_probs=29.5
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHhhhhh
Q 019729 112 IGRKGSLMIAAVPNIIGWLIISFSKDS-SFLFMGRLLEGFGVGVIS 156 (336)
Q Consensus 112 ~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~r~l~G~~~g~~~ 156 (336)
-||.+-++++..+++++.+...+...+ +.+...-++.+++.++..
T Consensus 54 ~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlg 99 (701)
T TIGR01667 54 TGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLG 99 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 367788888888888888877765544 444445555555554433
No 305
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=49.49 E-value=1e+02 Score=23.69 Aligned_cols=25 Identities=24% Similarity=0.226 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchh
Q 019729 91 GSLANVGAMVGAIASGQIAEYIGRK 115 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~g~l~dr~Grr 115 (336)
+.-+.++..+.+.+.|++.+|..++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~ 83 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRS 83 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhcccc
Confidence 3456678889999999999998876
No 306
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=47.61 E-value=1.1e+02 Score=22.19 Aligned_cols=25 Identities=12% Similarity=-0.106 Sum_probs=15.7
Q ss_pred HHHHHHHhhhhhhhHhHHHHhccCC
Q 019729 145 RLLEGFGVGVISYTVPVYIAEIAPQ 169 (336)
Q Consensus 145 r~l~G~~~g~~~~~~~~~~~~~~~~ 169 (336)
|.+.+.|..+.++...++..|...-
T Consensus 56 ~~~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 56 YAILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHHHhhHccccccHHHHHHHHHHH
Confidence 4444555556667777777777753
No 307
>COG1288 Predicted membrane protein [Function unknown]
Probab=47.06 E-value=1.9e+02 Score=26.77 Aligned_cols=23 Identities=4% Similarity=-0.071 Sum_probs=15.2
Q ss_pred ccchhHHHHHHhHHHHHHHHHHh
Q 019729 195 LFVNWRVLAVLGVLPCTLLIPGL 217 (336)
Q Consensus 195 ~~~~w~~~~~~~~~~~~~~~~~~ 217 (336)
..++||...|+......+..+.+
T Consensus 214 sG~~~Riv~~v~~~~~~i~y~~~ 236 (481)
T COG1288 214 SGMGLRIVVWVVFTLISIIYVYW 236 (481)
T ss_pred ccchHHHHHHHHHHHHHHHHHHH
Confidence 44589999888776655554443
No 308
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=47.03 E-value=1.9e+02 Score=25.09 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHHhhhhhhh-HhHHHHhccCCCc
Q 019729 139 SFLFMGRLLEGFGVGVISYT-VPVYIAEIAPQNM 171 (336)
Q Consensus 139 ~~~~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~~ 171 (336)
..-.+...+.+++.|...-+ ..-++.|....++
T Consensus 261 ~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~ 294 (317)
T PF02535_consen 261 SSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKH 294 (317)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 33444556677766654333 3345555554443
No 309
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=46.61 E-value=1e+02 Score=21.89 Aligned_cols=21 Identities=10% Similarity=-0.062 Sum_probs=9.5
Q ss_pred HHHHHHHHHhhhchhHHHHHH
Q 019729 101 GAIASGQIAEYIGRKGSLMIA 121 (336)
Q Consensus 101 ~~~~~g~l~dr~Grr~~l~~~ 121 (336)
|.+++-||=.++|-++.+.+.
T Consensus 59 G~~lG~WLD~~~~t~~~~tl~ 79 (100)
T TIGR02230 59 GVAVGIWLDRHYPSPFSWTLT 79 (100)
T ss_pred HHHHHHHHHhhcCCCcHHHHH
Confidence 333333444456655544433
No 310
>COG1422 Predicted membrane protein [Function unknown]
Probab=46.35 E-value=1.6e+02 Score=23.92 Aligned_cols=22 Identities=9% Similarity=0.265 Sum_probs=10.0
Q ss_pred HHHHHHHHHhhccchhHHHHHHh
Q 019729 184 TIGIMLAYLLGLFVNWRVLAVLG 206 (336)
Q Consensus 184 ~~g~~~~~~~~~~~~w~~~~~~~ 206 (336)
.+...++|.+.. .+..+..++.
T Consensus 32 ~ln~~f~P~i~~-~~p~lvilV~ 53 (201)
T COG1422 32 ALNVVFGPLLSP-LPPHLVILVA 53 (201)
T ss_pred HHHHHHhhhccc-cccHHHHHHH
Confidence 344555555554 3333333333
No 311
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=46.23 E-value=1.4e+02 Score=23.94 Aligned_cols=23 Identities=26% Similarity=0.322 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhch
Q 019729 92 SLANVGAMVGAIASGQIAEYIGR 114 (336)
Q Consensus 92 ~~~~~~~~~~~~~~g~l~dr~Gr 114 (336)
.-+.+++.+++.+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 44667888999999999999875
No 312
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=45.46 E-value=2.1e+02 Score=25.05 Aligned_cols=55 Identities=15% Similarity=-0.022 Sum_probs=26.5
Q ss_pred hHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccchhHHHHHHhHHHHHH
Q 019729 158 TVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTL 212 (336)
Q Consensus 158 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~w~~~~~~~~~~~~~ 212 (336)
+...|..-=+|-.+.+.+--......+...+.+....+.-.+.+..+..++++.+
T Consensus 133 ~g~~YTgGp~PlgY~gLGEi~~~vffG~l~v~g~~yiqt~~~~~~~ll~slp~gi 187 (303)
T COG1575 133 AGILYTGGPFPLGYMGLGEIFVGVFFGPLIVLGAYYIQTGRLSWAILLPSLPVGI 187 (303)
T ss_pred heeeeccCCcCcccCCHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 3344444456666666655555555555455554444333333444444444333
No 313
>PLN02601 beta-carotene hydroxylase
Probab=43.79 E-value=2.1e+02 Score=24.52 Aligned_cols=19 Identities=32% Similarity=0.226 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 019729 94 ANVGAMVGAIASGQIAEYI 112 (336)
Q Consensus 94 ~~~~~~~~~~~~g~l~dr~ 112 (336)
..++..++.=++.+++.|+
T Consensus 139 l~lgtfvgMEf~Aw~aHKY 157 (303)
T PLN02601 139 LSVGAAVGMEFWARWAHRA 157 (303)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4466777777777777665
No 314
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=43.76 E-value=18 Score=30.92 Aligned_cols=43 Identities=19% Similarity=0.291 Sum_probs=34.3
Q ss_pred HhhhccCCchhHHHHHHHHHHHHHHHHHHHH---------HHHhhhchhHHH
Q 019729 76 IISDLKLTISEFSIFGSLANVGAMVGAIASG---------QIAEYIGRKGSL 118 (336)
Q Consensus 76 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g---------~l~dr~Grr~~l 118 (336)
+.++.|.++.+.+.++-+..+.-.+..++.| +-.||+|||+..
T Consensus 43 fltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 43 FLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 5667788888888888888888888888876 456899999864
No 315
>COG3619 Predicted membrane protein [Function unknown]
Probab=43.65 E-value=1.9e+02 Score=24.09 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 019729 86 EFSIFGSLANVGAMVGAIASGQIAEYIGR 114 (336)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr 114 (336)
..........+...+|......+..|..|
T Consensus 56 ~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 56 ALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34555566666777776666666655554
No 316
>PRK10692 hypothetical protein; Provisional
Probab=43.17 E-value=1e+02 Score=21.11 Aligned_cols=16 Identities=25% Similarity=0.339 Sum_probs=7.1
Q ss_pred hhHHHHHHHHHHHHHH
Q 019729 114 RKGSLMIAAVPNIIGW 129 (336)
Q Consensus 114 rr~~l~~~~~~~~~~~ 129 (336)
||...+++.++++++.
T Consensus 3 Rk~a~~~GN~lMglGm 18 (92)
T PRK10692 3 RKNASLLGNVLMGLGL 18 (92)
T ss_pred chhhHHHhhHHHHHHH
Confidence 3444444444444443
No 317
>KOG3312 consensus Predicted membrane protein [Function unknown]
Probab=43.07 E-value=1.2e+02 Score=23.25 Aligned_cols=34 Identities=3% Similarity=-0.031 Sum_probs=18.5
Q ss_pred HHHhhcccCchhHHHHcCChHHHHHHHHHHhCCC
Q 019729 214 IPGLFFIPESPRWLAKMGMTEDFESSLQVLRGFD 247 (336)
Q Consensus 214 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (336)
.+.|..+..+..|..-+...++..+.+++-..++
T Consensus 24 gitWvlvYRt~~Yk~LKa~vdK~sKKLE~~K~~~ 57 (186)
T KOG3312|consen 24 GITWVLVYRTDKYKRLKAEVDKQSKKLEKKKEEN 57 (186)
T ss_pred CceEEEEEehhHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3445556666555555555566655555554433
No 318
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=42.67 E-value=2.7e+02 Score=25.57 Aligned_cols=49 Identities=14% Similarity=0.163 Sum_probs=30.8
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
++.|+..|........++.+...-+.---+.++...+..+|.++.++++
T Consensus 283 ~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 283 IIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 3445544444444445566666656655677777788888888777765
No 319
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=42.64 E-value=2.3e+02 Score=24.61 Aligned_cols=56 Identities=23% Similarity=0.243 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc
Q 019729 141 LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 197 (336)
Q Consensus 141 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 197 (336)
.-..|.+.|+-. ..+..++++++-.||.+++--..-=...+.+++.++.|+++-.+
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888876 56677889999999965554333334445555555666666443
No 320
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=41.59 E-value=1.6e+02 Score=23.19 Aligned_cols=47 Identities=11% Similarity=0.065 Sum_probs=25.1
Q ss_pred cchhhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 019729 69 SSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAA 122 (336)
Q Consensus 69 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 122 (336)
..|.+|.+. .+....+.. ..+...+.-++.|++.-|++.++...-+.
T Consensus 104 liPllp~~~-----~~~~~a~~~--s~~~~~~~L~ilG~~~a~~s~~~~~~s~l 150 (169)
T TIGR00267 104 FVPVLPFLV-----FDRMTATIV--TVLLTLIALLVLGVYLGRISRENILISSL 150 (169)
T ss_pred HHHHHHHHH-----cchhHHHHH--HHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 456667653 222223332 23345566666777777777666554443
No 321
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=41.03 E-value=1.6e+02 Score=27.10 Aligned_cols=44 Identities=11% Similarity=0.047 Sum_probs=36.0
Q ss_pred HHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHH
Q 019729 145 RLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIM 188 (336)
Q Consensus 145 r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 188 (336)
..+.+...-..+....++.+++.++..-|+.+.+.+...++|+-
T Consensus 376 y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~ 419 (510)
T KOG3574|consen 376 YAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGN 419 (510)
T ss_pred HHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCC
Confidence 55666666677777889999999999999999999988887754
No 322
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=39.35 E-value=61 Score=23.27 Aligned_cols=48 Identities=17% Similarity=0.102 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 019729 85 SEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLII 132 (336)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 132 (336)
+..|-..+++.-.+.+.++.+++..|+.-+.+.=.++..+..++..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 456777888888899999999999999877665556655555554443
No 323
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=38.87 E-value=3.5e+02 Score=25.68 Aligned_cols=65 Identities=12% Similarity=0.191 Sum_probs=39.3
Q ss_pred HHHHHHHhhhhhhhHhHHHHhccCC-CcchhHHhHHHHHHHHHHHHHHHhhc----cchhHHHHHHhHHH
Q 019729 145 RLLEGFGVGVISYTVPVYIAEIAPQ-NMRGSLGSVNQLSVTIGIMLAYLLGL----FVNWRVLAVLGVLP 209 (336)
Q Consensus 145 r~l~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~----~~~w~~~~~~~~~~ 209 (336)
-+..|+.........-..+.+.+|. +.+...+|-++...++-.++...+++ ..||+....+.-++
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv 358 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIV 358 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHH
Confidence 4556666666777777778888875 44455666665555554444444443 34898776664333
No 324
>PTZ00101 rhomboid-1 protease; Provisional
Probab=38.74 E-value=2.6e+02 Score=24.19 Aligned_cols=39 Identities=15% Similarity=0.085 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHhh-hchhHHHHHHHHHHHHHHHHHHh
Q 019729 96 VGAMVGAIASGQIAEY-IGRKGSLMIAAVPNIIGWLIISF 134 (336)
Q Consensus 96 ~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~ 134 (336)
+...+.....|...+| +|+++.+++-.+....+.++...
T Consensus 119 l~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~l~s~~ 158 (278)
T PTZ00101 119 FFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGNILSSS 158 (278)
T ss_pred HHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHH
Confidence 4445566666665554 79988876666555556555443
No 325
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=38.14 E-value=1.8e+02 Score=22.24 Aligned_cols=40 Identities=15% Similarity=0.166 Sum_probs=27.0
Q ss_pred hccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHH
Q 019729 79 DLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSL 118 (336)
Q Consensus 79 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l 118 (336)
+.|++....-....+.++.-+++.++..+++|+.+.-..+
T Consensus 66 eiGi~EkslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~ 105 (150)
T COG3086 66 ELGIEEKSLLKSALLVYIFPLVGLFLGAILAQYLFFSELI 105 (150)
T ss_pred EEccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 4567665555555666677777788888888887765443
No 326
>PRK11715 inner membrane protein; Provisional
Probab=37.63 E-value=2.9e+02 Score=25.72 Aligned_cols=20 Identities=20% Similarity=0.159 Sum_probs=8.7
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 019729 114 RKGSLMIAAVPNIIGWLIIS 133 (336)
Q Consensus 114 rr~~l~~~~~~~~~~~~~~~ 133 (336)
+|+.+.++..+.++=.++..
T Consensus 383 ~k~g~~~~~~L~~LYg~Ly~ 402 (436)
T PRK11715 383 WKRGLLFAAALAALYGVLYG 402 (436)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 44444444444444333333
No 327
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=37.60 E-value=62 Score=17.07 Aligned_cols=13 Identities=31% Similarity=0.508 Sum_probs=5.0
Q ss_pred HHHHhhcccCchh
Q 019729 213 LIPGLFFIPESPR 225 (336)
Q Consensus 213 ~~~~~~~~~e~~~ 225 (336)
.+....+++|+|+
T Consensus 16 ilffAI~FRePPr 28 (29)
T PF01405_consen 16 ILFFAIFFREPPR 28 (29)
T ss_dssp HHHHHHHSS----
T ss_pred HHHhhhhccCCCC
Confidence 3444556788775
No 328
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=37.57 E-value=1.4e+02 Score=20.61 Aligned_cols=40 Identities=13% Similarity=0.226 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhhhch-------hHHHHHHHHHHHHHHHHHHhhcch
Q 019729 99 MVGAIASGQIAEYIGR-------KGSLMIAAVPNIIGWLIISFSKDS 138 (336)
Q Consensus 99 ~~~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 138 (336)
..+.+..+++.+|..+ ++.+.++.++...+.+++++.++.
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 4556666777777654 778888888888888888776543
No 329
>PRK07419 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional
Probab=37.47 E-value=2.9e+02 Score=24.29 Aligned_cols=30 Identities=13% Similarity=-0.017 Sum_probs=13.8
Q ss_pred HHHHhccCCCcchhHHhHHHHHHHHHHHHH
Q 019729 161 VYIAEIAPQNMRGSLGSVNQLSVTIGIMLA 190 (336)
Q Consensus 161 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 190 (336)
.|...=+|-++||.+--.....++.....+
T Consensus 134 ~YT~gP~~l~y~gLGE~~v~l~~G~l~v~g 163 (304)
T PRK07419 134 LYQGPPFRLGYQGLGEPLCFLAFGPLAVAA 163 (304)
T ss_pred eccCCCcccCCCCchHHHHHHHHHHHHHHH
Confidence 343444566777764333333333333333
No 330
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=36.98 E-value=1.2e+02 Score=20.61 Aligned_cols=16 Identities=25% Similarity=0.418 Sum_probs=7.0
Q ss_pred hhHHHHHHHHHHHHHH
Q 019729 114 RKGSLMIAAVPNIIGW 129 (336)
Q Consensus 114 rr~~l~~~~~~~~~~~ 129 (336)
||...+++.++++++.
T Consensus 3 Rk~a~~~GN~lMglGm 18 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGM 18 (89)
T ss_pred chhhHHHhhHHHHHhH
Confidence 3444444444444443
No 331
>COG5547 Small integral membrane protein [Function unknown]
Probab=36.97 E-value=1.1e+02 Score=19.19 Aligned_cols=39 Identities=26% Similarity=0.293 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhh
Q 019729 115 KGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVG 153 (336)
Q Consensus 115 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 153 (336)
|+.++-+++...++++.+.+.---..+++...+.|++.|
T Consensus 8 kypIIgglvglliAili~t~GfwKtilviil~~lGv~iG 46 (62)
T COG5547 8 KYPIIGGLVGLLIAILILTFGFWKTILVIILILLGVYIG 46 (62)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555544443222344444555566554
No 332
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=36.46 E-value=2.8e+02 Score=23.90 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhhh
Q 019729 119 MIAAVPNIIGWLIISFS-KDSSFLFMGRLLEGFGVGV 154 (336)
Q Consensus 119 ~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~ 154 (336)
++++++++++.++..+. ++.+.+.+.-++.+++.++
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 34455554555544444 4444555555555555543
No 333
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=36.27 E-value=4.6e+02 Score=26.28 Aligned_cols=108 Identities=17% Similarity=0.233 Sum_probs=54.8
Q ss_pred HHHHHhh----hchhHHHHHHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHH
Q 019729 105 SGQIAEY----IGRKGSLMIAAVPNIIGWLIISFSKD-SSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVN 179 (336)
Q Consensus 105 ~g~l~dr----~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~ 179 (336)
.+-++|. -||.+-++++.+++.++.+...+... .+.+..+-++.+++.++....+ .|....+..
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlga~G-----------~Rya~Iaf~ 111 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLGAVG-----------QRYATIAFG 111 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhh-----------hhHHHHHHH
Confidence 3445553 46777788888888888777776544 4455555555555554333322 233333433
Q ss_pred HHHHHHHHHHHHHhhccchhH-H--HHHHhHHH-HHHHHHHhhcccCchh
Q 019729 180 QLSVTIGIMLAYLLGLFVNWR-V--LAVLGVLP-CTLLIPGLFFIPESPR 225 (336)
Q Consensus 180 ~~~~~~g~~~~~~~~~~~~w~-~--~~~~~~~~-~~~~~~~~~~~~e~~~ 225 (336)
.....+-.++++.... .|. . .+..+++. .++.++...+.|..|.
T Consensus 112 tLliaiytmlg~~~~~--~w~~~pllll~GalwY~llsl~~~~l~p~rp~ 159 (704)
T TIGR01666 112 SLLVALYTMLGYIEVN--VWFIQPVMLLCGTLWYSVVTLIVHLFFPNRPV 159 (704)
T ss_pred HHHHHHHHHhcccccc--hHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 3333444444432111 232 2 23334444 3334555566787664
No 334
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=36.10 E-value=3.3e+02 Score=25.26 Aligned_cols=11 Identities=9% Similarity=0.377 Sum_probs=4.5
Q ss_pred ccCCchhHHHH
Q 019729 80 LKLTISEFSIF 90 (336)
Q Consensus 80 ~g~s~~~~~~~ 90 (336)
..+.+-|..++
T Consensus 321 ~~iHpiQY~LV 331 (430)
T PF06123_consen 321 LRIHPIQYLLV 331 (430)
T ss_pred CcccHHHHHHH
Confidence 33444444333
No 335
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=35.97 E-value=96 Score=29.98 Aligned_cols=59 Identities=20% Similarity=0.180 Sum_probs=51.6
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhc
Q 019729 137 DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 195 (336)
Q Consensus 137 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 195 (336)
+..+++---++.|++.........-+.-+-+|++-|+.+.+++....++|..+...+..
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~ 515 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVS 515 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777899999998888888889899999999999999999999999999888773
No 336
>PRK03612 spermidine synthase; Provisional
Probab=35.95 E-value=2.3e+02 Score=27.05 Aligned_cols=48 Identities=13% Similarity=0.162 Sum_probs=32.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHH-hhhchhHH-HHHHHHHHHHHHHH
Q 019729 84 ISEFSIFGSLANVGAMVGAIASGQIA-EYIGRKGS-LMIAAVPNIIGWLI 131 (336)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~g~l~-dr~Grr~~-l~~~~~~~~~~~~~ 131 (336)
....|.+..+..+|.++|++..+++. ..+|-... ++++.+..+++.+.
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 34578899999999999999988654 47896544 44444444444333
No 337
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=35.62 E-value=1.1e+02 Score=19.11 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=22.6
Q ss_pred HHHHHHHhhccchhHHHHHHhHHHHHHHHHHhhcccCc
Q 019729 186 GIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPES 223 (336)
Q Consensus 186 g~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~ 223 (336)
|-+.+++.+...++....+++.+++++..++...+|++
T Consensus 18 gyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 18 GYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 33444444455567777777777777766665556554
No 338
>TIGR00930 2a30 K-Cl cotransporter.
Probab=35.27 E-value=5.4e+02 Score=26.86 Aligned_cols=21 Identities=19% Similarity=0.474 Sum_probs=9.6
Q ss_pred HHHHHHHHhhccchhHHHHHH
Q 019729 185 IGIMLAYLLGLFVNWRVLAVL 205 (336)
Q Consensus 185 ~g~~~~~~~~~~~~w~~~~~~ 205 (336)
+|.++...+...++|....+.
T Consensus 505 lG~l~c~~lmf~i~w~~ali~ 525 (953)
T TIGR00930 505 LGASLCCAIMFLISWWAALVA 525 (953)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444577544433
No 339
>PRK02237 hypothetical protein; Provisional
Probab=35.02 E-value=1.2e+02 Score=21.97 Aligned_cols=47 Identities=13% Similarity=0.040 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 019729 86 EFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLII 132 (336)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 132 (336)
..|-..+++.-.+.+.++.+++..|+.-+-+.=.+|..+..++..+.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 46778888888999999999999999876555555555555554433
No 340
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=34.71 E-value=1.4e+02 Score=19.95 Aligned_cols=13 Identities=15% Similarity=0.194 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHhh
Q 019729 99 MVGAIASGQIAEY 111 (336)
Q Consensus 99 ~~~~~~~g~l~dr 111 (336)
.+.+++.|++.+.
T Consensus 21 ~iisfi~Gy~~q~ 33 (76)
T PF06645_consen 21 AIISFIVGYITQS 33 (76)
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444444
No 341
>COG4769 Predicted membrane protein [Function unknown]
Probab=33.75 E-value=1.3e+02 Score=23.62 Aligned_cols=51 Identities=10% Similarity=-0.008 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 019729 94 ANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF 150 (336)
Q Consensus 94 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 150 (336)
+.+.+.+.+...-++..++|+|..-.++.-. +-++.+|..++.+.+++.+-
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhc
Confidence 3444555556666777788877653333222 23456777777777777654
No 342
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=33.50 E-value=1.3e+02 Score=27.08 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=44.4
Q ss_pred HhhhccCC-chh----HHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHhh
Q 019729 76 IISDLKLT-ISE----FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS 135 (336)
Q Consensus 76 ~~~~~g~s-~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 135 (336)
..++++-+ +.+ ..|.....++|..++..+.+++.|++|.-..+.++.+...++.+.+...
T Consensus 58 ~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 58 GADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 45555533 222 3577777788888888888999999999998888888888887776665
No 343
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=33.11 E-value=78 Score=16.92 Aligned_cols=12 Identities=8% Similarity=0.135 Sum_probs=7.6
Q ss_pred HHHhhcccCchh
Q 019729 214 IPGLFFIPESPR 225 (336)
Q Consensus 214 ~~~~~~~~e~~~ 225 (336)
+....+++|+|+
T Consensus 17 iFFAIfFRepPr 28 (31)
T PRK11875 17 LFFAIAFRDPPK 28 (31)
T ss_pred HHHhhhccCCCC
Confidence 344556788875
No 344
>PF08570 DUF1761: Protein of unknown function (DUF1761); InterPro: IPR013879 This entry shows conserved fungal proteins with unknown function.
Probab=33.10 E-value=2e+02 Score=21.21 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=18.3
Q ss_pred HHHHHHHhhhhhhccccccchhhHhHhhhccCCchh
Q 019729 51 CVLVVALGPIQFGFTCGYSSPTQAEIISDLKLTISE 86 (336)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 86 (336)
.+++..+..+..|....... .-....++.|.++++
T Consensus 3 avlvaa~~~~~~G~lWY~pl-Fg~~W~~~~g~~~~~ 37 (126)
T PF08570_consen 3 AVLVAAIAAFVLGFLWYGPL-FGKAWMRAMGITPED 37 (126)
T ss_pred HHHHHHHHHHHHHHHHHhHH-HHHHHHHHcCCCccc
Confidence 44455555555554432222 445566777776554
No 345
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=32.62 E-value=79 Score=28.78 Aligned_cols=94 Identities=13% Similarity=0.093 Sum_probs=39.6
Q ss_pred hccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHh------hcchhHHHHHHHHHHHHh
Q 019729 79 DLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF------SKDSSFLFMGRLLEGFGV 152 (336)
Q Consensus 79 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~r~l~G~~~ 152 (336)
..|. ..+...+.+...+...+++++-+. +.|.|..+.-+.....+....... ...+.....+-++.|+..
T Consensus 28 ~~g~-~~~~~~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~i~gi~~ 103 (389)
T PF00860_consen 28 AFGL-DADTAALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVLISGILF 103 (389)
T ss_dssp ------------HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHHHHHHHH
T ss_pred cccc-cchhhHHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHHHHHHHH
Confidence 3476 555557778888888888888888 778887776555444443222221 123344444445555543
Q ss_pred hhhhhhH-hHHHHhccCCCcchhHH
Q 019729 153 GVISYTV-PVYIAEIAPQNMRGSLG 176 (336)
Q Consensus 153 g~~~~~~-~~~~~~~~~~~~r~~~~ 176 (336)
-...... ...+.+++|+..++...
T Consensus 104 ~~l~~~g~~~~l~~~~pp~v~g~v~ 128 (389)
T PF00860_consen 104 ILLGLTGLRKRLRRLFPPVVKGAVV 128 (389)
T ss_dssp HHHHTT-SH-HHHHH--HHHHHHHH
T ss_pred HHHHHhchHHHHHHHhChhheEeeE
Confidence 2222211 22666777766655533
No 346
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=32.33 E-value=5.5e+02 Score=26.09 Aligned_cols=12 Identities=17% Similarity=0.293 Sum_probs=6.5
Q ss_pred hhHHHHHHhHHH
Q 019729 198 NWRVLAVLGVLP 209 (336)
Q Consensus 198 ~w~~~~~~~~~~ 209 (336)
+|...+++++++
T Consensus 129 ~~~~ALLLGAIL 140 (810)
T TIGR00844 129 NFPASLLMGACI 140 (810)
T ss_pred CHHHHHHHHhhh
Confidence 555555555544
No 347
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=32.17 E-value=2.1e+02 Score=21.11 Aligned_cols=24 Identities=21% Similarity=0.018 Sum_probs=14.4
Q ss_pred HHHHHHHhhhhhhhHhHHHHhccC
Q 019729 145 RLLEGFGVGVISYTVPVYIAEIAP 168 (336)
Q Consensus 145 r~l~G~~~g~~~~~~~~~~~~~~~ 168 (336)
|.+.+.|..+.++...++..|...
T Consensus 60 ~~~l~tGflGgfTTFSTf~~e~~~ 83 (119)
T PRK14230 60 KLLLITGFLGSLTTLSGFSLETVT 83 (119)
T ss_pred HHHHHHHHhchHhhHHHHHHHHHH
Confidence 444455555556666677777664
No 348
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=30.86 E-value=1.4e+02 Score=22.69 Aligned_cols=25 Identities=16% Similarity=0.220 Sum_probs=19.0
Q ss_pred HHhccCCCcchhHHhHHHHHHHHHH
Q 019729 163 IAEIAPQNMRGSLGSVNQLSVTIGI 187 (336)
Q Consensus 163 ~~~~~~~~~r~~~~~~~~~~~~~g~ 187 (336)
+.|++|+..|....+.++.......
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k 84 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVK 84 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 5799999999998887775554433
No 349
>COG3162 Predicted membrane protein [Function unknown]
Probab=30.83 E-value=2e+02 Score=20.42 Aligned_cols=62 Identities=18% Similarity=0.182 Sum_probs=30.9
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHhhchHHHHHhHHHHHHhcCCC-CcchhHHHHHHHHhhhh
Q 019729 270 IRFAELKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSSNIFANAGKI-NISLDVILPIVEALNST 333 (336)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s-~~~~~~~~~~~~~~g~~ 333 (336)
..++++.+.+. +..+.+.+.++....++..+..|.|.++..-=.+ ..+-++.+++..++.+.
T Consensus 13 p~f~eLv~kr~--~Fa~~ltl~flv~Y~~filLiaf~~~~l~tp~~~~~Vt~Gip~gvg~fv~tf 75 (102)
T COG3162 13 PRFRELVRKRR--RFAVPLTLIFLVVYFGFILLIAFAPGWLATPLFGASVTRGIPFGVGVFVMTF 75 (102)
T ss_pred HhHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhHHHhcCcccCCceehhHhHHHHHHHHHH
Confidence 34555554432 2333333333333334556666777666433112 35567777776665544
No 350
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=30.63 E-value=1.6e+02 Score=20.41 Aligned_cols=48 Identities=10% Similarity=0.123 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhhchHHHHHhHHHHHHhc-CCCCcchhHHHHHHHHhhhh
Q 019729 286 IGIGLLVLQQLSGINGVLFYSSNIFANA-GKINISLDVILPIVEALNST 333 (336)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~g~~ 333 (336)
+.+.+.++..+.++.....|.|..+... .-+..+.++++++..++.++
T Consensus 19 ~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~~~~~ 67 (91)
T PF04341_consen 19 WPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQIVFAW 67 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHHHHHH
Confidence 3333334444445567788888888655 22356777777776665443
No 351
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=30.01 E-value=1.6e+02 Score=22.48 Aligned_cols=26 Identities=15% Similarity=0.185 Sum_probs=19.4
Q ss_pred HHHhccCCCcchhHHhHHHHHHHHHH
Q 019729 162 YIAEIAPQNMRGSLGSVNQLSVTIGI 187 (336)
Q Consensus 162 ~~~~~~~~~~r~~~~~~~~~~~~~g~ 187 (336)
-+.|++|+..|....+.+........
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~~k 82 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNFVK 82 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 35799999999998887766555433
No 352
>CHL00031 psbT photosystem II protein T
Probab=29.43 E-value=91 Score=16.97 Aligned_cols=12 Identities=33% Similarity=0.451 Sum_probs=7.8
Q ss_pred HHHhhcccCchh
Q 019729 214 IPGLFFIPESPR 225 (336)
Q Consensus 214 ~~~~~~~~e~~~ 225 (336)
+....+++|+|+
T Consensus 17 lFFAI~FRePPr 28 (33)
T CHL00031 17 IFFAIFFREPPK 28 (33)
T ss_pred HHHhheecCCCC
Confidence 444556788876
No 353
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.32 E-value=83 Score=29.10 Aligned_cols=43 Identities=16% Similarity=0.079 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----hh-chhHH--HHHHHHHHHHHH
Q 019729 87 FSIFGSLANVGAMVGAIASGQIAE----YI-GRKGS--LMIAAVPNIIGW 129 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~g~l~d----r~-Grr~~--l~~~~~~~~~~~ 129 (336)
-|.+.+...+.+++.+++.|+.+- |. |||++ ++++..+.....
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~Wik~m~lta~Lfp~~~ 374 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSGSFYARLGGRRWIKNMLLTASLFPVPV 374 (593)
T ss_pred chHHHHHHHHHHHhcccccccccceeeehhccHHHHHHHHHHhhhhhHHH
Confidence 455666666777777777776554 45 45554 344444443333
No 354
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=28.02 E-value=2.9e+02 Score=23.57 Aligned_cols=18 Identities=6% Similarity=0.351 Sum_probs=9.3
Q ss_pred hHHHHHHHHHhhhhhhcc
Q 019729 48 VVFCVLVVALGPIQFGFT 65 (336)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~ 65 (336)
++.-+.++.+...++|..
T Consensus 181 RivG~~LAv~aGvlyGs~ 198 (254)
T PF07857_consen 181 RIVGIILAVFAGVLYGSN 198 (254)
T ss_pred hhHhHHHHHHHHHHHhcc
Confidence 444555555555555543
No 355
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=27.05 E-value=4.9e+02 Score=23.81 Aligned_cols=51 Identities=22% Similarity=0.154 Sum_probs=34.3
Q ss_pred HHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhc
Q 019729 145 RLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 195 (336)
Q Consensus 145 r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 195 (336)
-++.|+..|.........+.+...-++---+.++...+...|.+..++++.
T Consensus 277 A~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa~ 327 (399)
T PF00909_consen 277 ALLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLFAS 327 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHHCC
T ss_pred HHHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHHhc
Confidence 345555554444444445667777777777888888888899888888773
No 356
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=26.56 E-value=2.1e+02 Score=19.82 Aligned_cols=32 Identities=25% Similarity=0.472 Sum_probs=18.7
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHhHHHHhccC
Q 019729 137 DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAP 168 (336)
Q Consensus 137 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~ 168 (336)
-.+=++++|.+.|-+.+..-.+......|.-|
T Consensus 30 it~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~p 61 (89)
T PF04550_consen 30 ITLRLFIGRVILGSAVSVVAGAALIQFPDLPP 61 (89)
T ss_pred CchhHHhHHHHHhhHHHHHHHHHHhcCCCCCH
Confidence 34557778888877766554444444444433
No 357
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=26.46 E-value=2.2e+02 Score=23.69 Aligned_cols=48 Identities=13% Similarity=0.025 Sum_probs=24.9
Q ss_pred hhHHHHHHhHHHHHHHHHHhhcc--cCchhHHHHcCChHHHHHHHHHHhC
Q 019729 198 NWRVLAVLGVLPCTLLIPGLFFI--PESPRWLAKMGMTEDFESSLQVLRG 245 (336)
Q Consensus 198 ~w~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~ 245 (336)
++.|.+.+.+++..+.+..+.+- -|...|-..+++...+...++.+++
T Consensus 50 ~~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~lr~ 99 (224)
T PF13829_consen 50 GSWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLRR 99 (224)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhhcC
Confidence 44466666665544433333332 2333344455666677777776654
No 358
>COG2119 Predicted membrane protein [Function unknown]
Probab=26.28 E-value=3.3e+02 Score=21.90 Aligned_cols=36 Identities=17% Similarity=0.068 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHH
Q 019729 94 ANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGW 129 (336)
Q Consensus 94 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 129 (336)
..+...++.+.+.++++|+..|++-.++.+++.+..
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 345667788888899999999998887776665544
No 359
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=26.17 E-value=5.4e+02 Score=23.96 Aligned_cols=68 Identities=13% Similarity=0.170 Sum_probs=38.1
Q ss_pred HHHHhhhchhHH-----HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHhHHHHhccCCCcchhHHh
Q 019729 106 GQIAEYIGRKGS-----LMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGS 177 (336)
Q Consensus 106 g~l~dr~Grr~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~ 177 (336)
=++.+...++++ +++|+.+...-.++.+++.+.. +..+.++ +...+......|+......++|+..++
T Consensus 312 fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEhi~-F~~AYli---Aa~a~i~Li~~Y~~~vl~~~k~~~~~~ 384 (430)
T PF06123_consen 312 FFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEHIG-FNLAYLI---AALACIGLISLYLSSVLKSWKRGLIFA 384 (430)
T ss_pred HHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHH---HHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 345566665554 4566666666667777776543 2222222 233344455567777777677766553
No 360
>COG2610 GntT H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]
Probab=24.56 E-value=5.8e+02 Score=23.82 Aligned_cols=43 Identities=19% Similarity=0.421 Sum_probs=27.7
Q ss_pred HhHhhhccCCchhHHHHHHHHHHHHHHHHHHH---------HHHHhhhchhHHHH
Q 019729 74 AEIISDLKLTISEFSIFGSLANVGAMVGAIAS---------GQIAEYIGRKGSLM 119 (336)
Q Consensus 74 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~---------g~l~dr~Grr~~l~ 119 (336)
..+.+.+| ...+.+.-+..+|..+|.++- -.+.+|+|.||...
T Consensus 49 ~~i~~G~g---gtlg~i~~Vi~lGam~GkLle~sGaA~~IA~tii~~~G~kr~~~ 100 (442)
T COG2610 49 GTIMKGFG---GTLGSLALVIGLGAMLGKLLEDSGAAESIADTLIRKFGEKRALL 100 (442)
T ss_pred HHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhCcchHHH
Confidence 34555555 345566666777777776653 37788999988644
No 361
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=23.91 E-value=69 Score=20.15 Aligned_cols=20 Identities=15% Similarity=0.192 Sum_probs=16.6
Q ss_pred hhHHHHHHhHHHHHHHHHHh
Q 019729 198 NWRVLAVLGVLPCTLLIPGL 217 (336)
Q Consensus 198 ~w~~~~~~~~~~~~~~~~~~ 217 (336)
|||...+++++++++++.+.
T Consensus 4 g~r~~~~~ggfVg~iG~a~Y 23 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALY 23 (58)
T ss_pred cccchhhHHHHHHHHHHHHh
Confidence 79999999999988886654
No 362
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=22.88 E-value=4.9e+02 Score=22.34 Aligned_cols=16 Identities=19% Similarity=0.225 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHhh
Q 019729 96 VGAMVGAIASGQIAEY 111 (336)
Q Consensus 96 ~~~~~~~~~~g~l~dr 111 (336)
+...++.++..-+.||
T Consensus 69 f~~SiSmI~vsEiGDK 84 (294)
T KOG2881|consen 69 FTASISMIFVSEIGDK 84 (294)
T ss_pred HHHhhheeeeeeccch
Confidence 3334444444444444
No 363
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=22.70 E-value=3.3e+02 Score=20.32 Aligned_cols=25 Identities=16% Similarity=0.013 Sum_probs=14.6
Q ss_pred HHHHHHHhhhhhhhHhHHHHhccCC
Q 019729 145 RLLEGFGVGVISYTVPVYIAEIAPQ 169 (336)
Q Consensus 145 r~l~G~~~g~~~~~~~~~~~~~~~~ 169 (336)
|.+.+.|..+.++...++..|...-
T Consensus 69 ~~~l~tGf~GgfTTFSTf~~E~~~l 93 (128)
T PRK14199 69 KLFLTTGIMGGLTTFSTFSYETINL 93 (128)
T ss_pred HHHHHhHHhcccccHHHHHHHHHHH
Confidence 3444444445566666777777643
No 364
>PRK04201 zinc transporter ZupT; Provisional
Probab=22.66 E-value=4.9e+02 Score=22.21 Aligned_cols=16 Identities=6% Similarity=-0.031 Sum_probs=9.3
Q ss_pred HHHhhhchhHHHHHHH
Q 019729 107 QIAEYIGRKGSLMIAA 122 (336)
Q Consensus 107 ~l~dr~Grr~~l~~~~ 122 (336)
....+..||+.+.++.
T Consensus 173 l~~~~~s~~~~~~~~~ 188 (265)
T PRK04201 173 VYYATGSKKKAFLYSF 188 (265)
T ss_pred HHHccCcHHHHHHHHH
Confidence 3445566777666543
No 365
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=22.33 E-value=2.1e+02 Score=18.53 Aligned_cols=44 Identities=14% Similarity=-0.026 Sum_probs=34.9
Q ss_pred hhHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchh
Q 019729 72 TQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRK 115 (336)
Q Consensus 72 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 115 (336)
..|.+.--+|.+..+.+.+.....+...+-..+.-++-||+=+|
T Consensus 21 ~~P~~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 21 SVPLIAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34545556788888888888888888999999999999997544
No 366
>PRK10666 ammonium transporter; Provisional
Probab=22.32 E-value=6.4e+02 Score=23.46 Aligned_cols=49 Identities=12% Similarity=0.115 Sum_probs=27.9
Q ss_pred HHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhh
Q 019729 146 LLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 194 (336)
Q Consensus 146 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 194 (336)
++.|+..|........++.+.+.-+.---+.++...+...|.+...+++
T Consensus 307 ~iiG~vag~v~~~~~~~l~~~~~iDD~~~a~~vHgv~Gi~G~l~~glfa 355 (428)
T PRK10666 307 LIIGVVAGLAGLWGVTMLKRWLRVDDPCDVFGVHGVCGIVGCILTGIFA 355 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcCccHhhhHhHHHHHHHHHHhh
Confidence 3444444444444444555445555555566777777777777666665
No 367
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=22.22 E-value=1.8e+02 Score=29.91 Aligned_cols=43 Identities=7% Similarity=0.069 Sum_probs=22.8
Q ss_pred hHhHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhchhHH
Q 019729 73 QAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGS 117 (336)
Q Consensus 73 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~ 117 (336)
...+...+|++..-.|+.. .++|..+.=++....+-|-|.-.+
T Consensus 956 at~IG~vlGIse~VmGlTf--LA~GTSIPDlisSvivArkG~gdM 998 (1096)
T TIGR00927 956 AHQVGETIGISEEIMGLTI--LAAGTSIPDLITSVIVARKGLGDM 998 (1096)
T ss_pred HHHhhhhcCCChhhhhhhh--hhhhcccHHHHHHHHHHHccCCcc
Confidence 3345556777766555432 233555555555555555554443
No 368
>KOG1287 consensus Amino acid transporters [Amino acid transport and metabolism]
Probab=21.87 E-value=6.9e+02 Score=23.65 Aligned_cols=109 Identities=16% Similarity=0.095 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHH-HHHHHHHhhhhhhhHhHHHHhccCCCcchhHHhHHHHHHHHHHHHHHHhhccc-
Q 019729 120 IAAVPNIIGWLIISFSKDSSFLFMG-RLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV- 197 (336)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~-r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~- 197 (336)
.+.+..++..++..+..++..++-. .+..-++. ....++..++.---|+..|..-..+..-...+-..+.-.+...+
T Consensus 338 ~allf~~~~~i~~~~~~d~~~LIny~sf~~~l~~-~l~~~gll~lR~k~p~~~rPiKvpl~~p~~~~~~~i~lvvip~~~ 416 (479)
T KOG1287|consen 338 PALLFSGLLSIVLSLIGDFDQLINYVSFAYWLFR-GLSMAGLLWLRWKHPPLPRPIKVPLFIPILFLLICIFLVVIPIIS 416 (479)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCCCEeeeeehHHHHHHHHHHHhheeeee
Confidence 4555555555555655555444332 22222222 22222334444445667776655543333322222222222222
Q ss_pred hhHHHHHHhHHHHHHHHHHhh-c--ccCchhHHHH
Q 019729 198 NWRVLAVLGVLPCTLLIPGLF-F--IPESPRWLAK 229 (336)
Q Consensus 198 ~w~~~~~~~~~~~~~~~~~~~-~--~~e~~~~~~~ 229 (336)
....-..++..+.+.++.+.+ + .++.|+|+.+
T Consensus 417 ~~~~~~~ig~~i~l~G~~~Y~~~i~~~~~p~~~~~ 451 (479)
T KOG1287|consen 417 DFPVETLIGIGIILSGVPFYFLFIHWKKKPKWLRK 451 (479)
T ss_pred cCCccchhHHHHHHHhhhhheEEEEecCCcHHHHH
Confidence 212224444444444444333 2 2455777643
No 369
>PF08997 UCR_6-4kD: Ubiquinol-cytochrome C reductase complex, 6.4kD protein; InterPro: IPR015089 The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4 kDa protein, which may be closely linked to the iron-sulphur protein in the complex and function as an iron-sulphur protein-binding factor []. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0009055 electron carrier activity; PDB: 1NTM_K 1SQV_K 1SQB_K 1NU1_K 1SQQ_K 1BE3_K 1BGY_W 2YBB_k 2FYU_K 1L0N_K ....
Probab=21.62 E-value=1.6e+02 Score=18.40 Aligned_cols=36 Identities=11% Similarity=0.141 Sum_probs=17.7
Q ss_pred ccCCCcchhHHhHHHHHHHHHHHHHHHhhccchhHH
Q 019729 166 IAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRV 201 (336)
Q Consensus 166 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~w~~ 201 (336)
...+++...+-.+.-....-|..-+..+..+..||.
T Consensus 5 ~~G~k~~~lak~w~ps~~~~G~~~~l~lvy~TDWkl 40 (56)
T PF08997_consen 5 LIGPKYIELAKNWIPSAAAWGAAGGLALVYFTDWKL 40 (56)
T ss_dssp G-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred hhcHHHHHHHHHhchhHHHHhhhhhhheeeecchHh
Confidence 344455555555555555555544444444446654
No 370
>COG1380 Putative effector of murein hydrolase LrgA [General function prediction only]
Probab=20.81 E-value=1.9e+02 Score=21.74 Aligned_cols=40 Identities=8% Similarity=0.130 Sum_probs=27.6
Q ss_pred hHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 019729 75 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGR 114 (336)
Q Consensus 75 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr 114 (336)
.+.+.++.-..+.-.+..+..++..+.....|++.|+.=|
T Consensus 77 gVm~y~~~l~~~~~~Il~~~iiST~lv~~vtg~~~~~l~~ 116 (128)
T COG1380 77 GVMNYFDLLAADGLPILVVIIISTLLVLLVTGWVVQLLIR 116 (128)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556555666667777777888888888888887633
No 371
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=20.65 E-value=3.7e+02 Score=20.07 Aligned_cols=25 Identities=16% Similarity=0.105 Sum_probs=15.8
Q ss_pred HHHHHHHhhhhhhhHhHHHHhccCC
Q 019729 145 RLLEGFGVGVISYTVPVYIAEIAPQ 169 (336)
Q Consensus 145 r~l~G~~~g~~~~~~~~~~~~~~~~ 169 (336)
|.+.+.|..+.++...++..|...-
T Consensus 69 ~~~l~tGf~GgfTTFSTf~~E~~~l 93 (127)
T PRK14200 69 RQIIGLGFLGALTTFSTFSMDNVLL 93 (127)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHH
Confidence 4455555556667777777777653
No 372
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.31 E-value=35 Score=25.52 Aligned_cols=16 Identities=19% Similarity=0.164 Sum_probs=7.0
Q ss_pred HHHHHHhHHHHHHHHH
Q 019729 200 RVLAVLGVLPCTLLIP 215 (336)
Q Consensus 200 ~~~~~~~~~~~~~~~~ 215 (336)
||++++..++.+++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 3455544444443333
Done!