Query 019731
Match_columns 336
No_of_seqs 167 out of 762
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 06:16:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019731.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019731hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1cmca_ a.43.1.5 (A:) Met repr 17.4 26 0.0019 24.6 1.7 14 322-335 52-65 (104)
2 d1cxla3 b.71.1.1 (A:407-496) C 16.6 50 0.0036 23.2 3.1 32 14-45 3-34 (90)
3 d1weya_ d.58.7.1 (A:) Calcipre 13.0 55 0.004 22.9 2.6 27 294-320 21-47 (104)
4 d1va4a_ c.69.1.12 (A:) Arylest 12.3 1.2E+02 0.0087 22.6 4.8 55 259-318 1-57 (271)
5 d1cyga3 b.71.1.1 (A:403-491) C 11.9 81 0.0059 21.9 3.1 32 14-45 3-34 (89)
6 d3bmva3 b.71.1.1 (A:407-495) C 11.3 1.2E+02 0.009 20.9 4.0 31 15-45 4-34 (89)
7 d1or7a2 a.177.1.1 (A:-1-111) S 11.0 13 0.00097 26.5 -1.6 35 300-336 24-61 (113)
8 d1d7ya3 d.87.1.1 (A:309-405) N 10.6 34 0.0025 23.9 0.7 11 267-277 7-17 (97)
9 d2cuqa1 g.39.1.3 (A:43-74) Fou 10.5 24 0.0018 20.0 -0.2 16 226-243 9-24 (32)
10 d1q1ra3 d.87.1.1 (A:320-422) P 9.9 72 0.0052 22.4 2.3 10 267-276 6-15 (103)
No 1
>d1cmca_ a.43.1.5 (A:) Met repressor, MetJ (MetR) {Escherichia coli [TaxId: 562]}
Probab=17.43 E-value=26 Score=24.65 Aligned_cols=14 Identities=43% Similarity=0.785 Sum_probs=11.0
Q ss_pred chhHHHHHHHHhhh
Q 019731 322 SYSSLLCHLLLSAW 335 (336)
Q Consensus 322 e~~~~l~~~~~~~~ 335 (336)
.-+.+||+|||-|.
T Consensus 52 TNSELLCEAFLHAf 65 (104)
T d1cmca_ 52 TNSELLCEAFLHAF 65 (104)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHh
Confidence 34578999999884
No 2
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]}
Probab=16.59 E-value=50 Score=23.16 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=24.7
Q ss_pred eEEEEEECCEEEEEeCCCCCcceEEEECCCCc
Q 019731 14 RMRLWEFPDQFVVEPTDGSSGSALAISRADGS 45 (336)
Q Consensus 14 ~l~L~~t~d~~ii~~~~~~~~~~L~Idr~~g~ 45 (336)
.-++|..+|.|+++..-+.+...+.|||...+
T Consensus 3 ~~~rw~~~DvyvyeR~~g~~~vlVAiNr~~~~ 34 (90)
T d1cxla3 3 TQERWINNDVLIYERKFGSNVAVVAVNRNLNA 34 (90)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEECCSSC
T ss_pred cEEEEECCCEEEEEEEcCCCEEEEEEECCCCC
Confidence 35789999999999865543467899997654
No 3
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=12.98 E-value=55 Score=22.93 Aligned_cols=27 Identities=11% Similarity=0.252 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHhcCCeEEEEcccCCC
Q 019731 294 RVVERHFLDLRKKYGNVLAVDLVNKYQ 320 (336)
Q Consensus 294 ~a~~~HF~~l~~~YG~v~~VNLl~~kg 320 (336)
+..+..|.+|.+.||.+.-+.+++.+|
T Consensus 21 d~~k~~l~~lF~~~G~i~~~~~~k~~~ 47 (104)
T d1weya_ 21 SETRAKFESLFRTYDKDTTFQYFKSFK 47 (104)
T ss_dssp TTHHHHHHHHHHTTCSSCEEEEETTTT
T ss_pred HHHHHHHHHHhcccccceEEEEecCCC
Confidence 446788999999999988788887665
No 4
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]}
Probab=12.29 E-value=1.2e+02 Score=22.63 Aligned_cols=55 Identities=15% Similarity=0.092 Sum_probs=34.7
Q ss_pred EEEEEeecCcceeeEEccCCcccceEEEe-cCCCcHHHHHHHHHHHHHhcC-CeEEEEcccC
Q 019731 259 ASFVQVRGSIPFLWEQTVDLTYKPKFEIL-RAEEAPRVVERHFLDLRKKYG-NVLAVDLVNK 318 (336)
Q Consensus 259 ~SfvQiRGSVPlfW~Q~~~l~~kP~i~i~-~~~~~~~a~~~HF~~l~~~YG-~v~~VNLl~~ 318 (336)
+||+.+.| +.++|++..+ .|++.+. +...+...+..-.+.|.++ | .++++++-..
T Consensus 1 s~f~~~dG-~~l~y~~~G~---g~~vv~lHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~ 57 (271)
T d1va4a_ 1 STFVAKDG-TQIYFKDWGS---GKPVLFSHGWLLDADMWEYQMEYLSSR-GYRTIAFDRRGF 57 (271)
T ss_dssp CEEECTTS-CEEEEEEESS---SSEEEEECCTTCCGGGGHHHHHHHHTT-TCEEEEECCTTS
T ss_pred CEEEeECC-eEEEEEEEcC---CCeEEEECCCCCCHHHHHHHHHHHHhC-CCEEEEEecccc
Confidence 47888888 8999998753 3666654 3333444454445555554 3 5788888754
No 5
>d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=11.86 E-value=81 Score=21.92 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=24.6
Q ss_pred eEEEEEECCEEEEEeCCCCCcceEEEECCCCc
Q 019731 14 RMRLWEFPDQFVVEPTDGSSGSALAISRADGS 45 (336)
Q Consensus 14 ~l~L~~t~d~~ii~~~~~~~~~~L~Idr~~g~ 45 (336)
.-+.|..+|.|+++...+.+...+.|||...+
T Consensus 3 ~~~rwi~~DvyvyeR~fg~~~vlVAiNr~~~~ 34 (89)
T d1cyga3 3 TEQRWINGDVYVYERQFGKDVVLVAVNRSSSS 34 (89)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEECCSSC
T ss_pred eeEEEECCCEEEEEEecCCcEEEEEEECCCCC
Confidence 34789999999999865543467899998654
No 6
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]}
Probab=11.30 E-value=1.2e+02 Score=20.87 Aligned_cols=31 Identities=23% Similarity=0.333 Sum_probs=24.3
Q ss_pred EEEEEECCEEEEEeCCCCCcceEEEECCCCc
Q 019731 15 MRLWEFPDQFVVEPTDGSSGSALAISRADGS 45 (336)
Q Consensus 15 l~L~~t~d~~ii~~~~~~~~~~L~Idr~~g~ 45 (336)
-++|..+|-|+++...+.+...+.|||...+
T Consensus 4 ~~~~in~DvyvyeR~~~~~~vlVAiNr~~~~ 34 (89)
T d3bmva3 4 QQRWINNDVYIYERKFGNNVALVAINRNLST 34 (89)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEECCSSC
T ss_pred eEEEECCCEEEEEEecCCcEEEEEEECCCCC
Confidence 4689999999999876554457899998654
No 7
>d1or7a2 a.177.1.1 (A:-1-111) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=11.04 E-value=13 Score=26.48 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=23.8
Q ss_pred HHHHHHhcCCe---EEEEcccCCCCchhHHHHHHHHhhhC
Q 019731 300 FLDLRKKYGNV---LAVDLVNKYQLSYSSLLCHLLLSAWR 336 (336)
Q Consensus 300 F~~l~~~YG~v---~~VNLl~~kg~e~~~~l~~~~~~~~~ 336 (336)
|+.|..+|.+. +|..+++. .+.+.++++.||.+|+
T Consensus 24 f~~l~~~y~~~l~~~~~~~~~~--~daeDl~Qe~~l~~~~ 61 (113)
T d1or7a2 24 FNLLVVRYQHKVASLVSRYVPS--GDVPDVVQEAFIKAYR 61 (113)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCG--GGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHH
Confidence 55666666542 24455654 4689999999999984
No 8
>d1d7ya3 d.87.1.1 (A:309-405) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=10.64 E-value=34 Score=23.92 Aligned_cols=11 Identities=18% Similarity=0.785 Sum_probs=8.8
Q ss_pred CcceeeEEccC
Q 019731 267 SIPFLWEQTVD 277 (336)
Q Consensus 267 SVPlfW~Q~~~ 277 (336)
.||-|||.+-+
T Consensus 7 ~vP~FWSdQ~d 17 (97)
T d1d7ya3 7 ELPWYWSDQGA 17 (97)
T ss_dssp CCCEEEEEETT
T ss_pred CCCcEEeccCC
Confidence 58999998743
No 9
>d2cuqa1 g.39.1.3 (A:43-74) Four and a half LIM domains 3, FHL3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.53 E-value=24 Score=19.98 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=10.9
Q ss_pred CCCcccccccCCCCCcee
Q 019731 226 RNGTRMWRRGADSDGYVA 243 (336)
Q Consensus 226 raGtRy~~RGiD~~G~vA 243 (336)
-||.||.+| |+.-+++
T Consensus 9 LaGqrFTSr--de~pYC~ 24 (32)
T d2cuqa1 9 LAGQQFTSR--DEDPYCV 24 (32)
T ss_dssp CTTCCEEEC--SSSEEEH
T ss_pred ccCCccccC--CCCccHH
Confidence 489999998 4544443
No 10
>d1q1ra3 d.87.1.1 (A:320-422) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}
Probab=9.89 E-value=72 Score=22.37 Aligned_cols=10 Identities=20% Similarity=0.923 Sum_probs=8.3
Q ss_pred CcceeeEEcc
Q 019731 267 SIPFLWEQTV 276 (336)
Q Consensus 267 SVPlfW~Q~~ 276 (336)
.||-|||.+-
T Consensus 6 ~vP~FWSdQ~ 15 (103)
T d1q1ra3 6 AAPWFWSDQY 15 (103)
T ss_dssp CCCEEEEEET
T ss_pred CCCcEeeecC
Confidence 4899999864
Done!