BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019734
(336 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225470583|ref|XP_002273705.1| PREDICTED: F-box protein At1g70590 [Vitis vinifera]
Length = 335
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/346 (70%), Positives = 275/346 (79%), Gaps = 21/346 (6%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSI---KSTE 57
MKQRTWP +S GSRFTAL+ + S +K + RS+ S +I S E
Sbjct: 1 MKQRTWPVKSEGSRFTALRL-----------YSGSGKKEETRLRSKRYSSITIPFRSSRE 49
Query: 58 GHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG- 116
DF+ LP D+L KIAA+FTLP L+ ASLVC+SW D+LRPLREAM+LL+WGKRFKHG G
Sbjct: 50 ETDFSKLPDDILQKIAATFTLPDLQTASLVCRSWRDSLRPLREAMLLLKWGKRFKHGHGG 109
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLG 176
VR N+ KALDSFLKGAARGSTLAMVDAGL+YWEM KKE +I+LYR+AA LGDP Q NLG
Sbjct: 110 VRPNIQKALDSFLKGAARGSTLAMVDAGLIYWEMGKKEESIALYRKAAELGDPTAQCNLG 169
Query: 177 ISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
ISYL EEA K LY +S AG+VRAQYQLALCLHRGRG+D NL EAARWYL+AAEG
Sbjct: 170 ISYLHSEPPKREEAAKWLYLSSNAGYVRAQYQLALCLHRGRGMDRNLPEAARWYLKAAEG 229
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 290
GYVRAMYN SLCYS+GEGL SHRQAR+WMKRAAD GH KAQ EHGLGLF+EGEMMKAVV
Sbjct: 230 GYVRAMYNVSLCYSYGEGLVHSHRQARRWMKRAADRGHSKAQFEHGLGLFSEGEMMKAVV 289
Query: 291 YLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 336
YLELATRAGETAA HVKNVILQQLS TSRDRAML+ D+WRA+P+ H
Sbjct: 290 YLELATRAGETAAAHVKNVILQQLSVTSRDRAMLLADNWRALPTSH 335
>gi|255574005|ref|XP_002527920.1| conserved hypothetical protein [Ricinus communis]
gi|223532695|gb|EEF34477.1| conserved hypothetical protein [Ricinus communis]
Length = 329
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/343 (70%), Positives = 269/343 (78%), Gaps = 21/343 (6%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHD 60
MKQRTWP RS GS+F +L P T +++ I +S S S +G D
Sbjct: 1 MKQRTWPSRSDGSKFKSLPLPYT-----------ISKREIIPSKSVISFS---VPKDGRD 46
Query: 61 FASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-VRK 119
F++LPFD+L KIAASFTLP L+ ASLVC+SW D LRPLREAMV L+WGKRFKHGRG VR
Sbjct: 47 FSTLPFDILIKIAASFTLPNLQTASLVCRSWRDGLRPLREAMVFLKWGKRFKHGRGGVRP 106
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY 179
NL KALDSFLKG A GS LAMVDAGL+YWEM K+ AI+LY +AA LGDPAGQ NLGI Y
Sbjct: 107 NLQKALDSFLKGVALGSPLAMVDAGLVYWEMGFKDKAIALYLKAAELGDPAGQCNLGIYY 166
Query: 180 LQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+Q +EA+K L QAS AGHVRAQYQLALCLH+GRGVD NLQEAA+WYL+AA GGYV
Sbjct: 167 VQVEPPKPKEAIKWLLQASNAGHVRAQYQLALCLHQGRGVDHNLQEAAKWYLKAAAGGYV 226
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 293
RAMYN +LCYS GEGL S+RQARKWMKRAAD GH KAQ EHGLGLF+EGEMMKAVVYLE
Sbjct: 227 RAMYNVALCYSVGEGLAQSYRQARKWMKRAADRGHSKAQFEHGLGLFSEGEMMKAVVYLE 286
Query: 294 LATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 336
LATRAGETAA HVKNVILQQLS TSRDR ML+ DSWRA+PS H
Sbjct: 287 LATRAGETAAAHVKNVILQQLSTTSRDRVMLLADSWRALPSSH 329
>gi|224110896|ref|XP_002315673.1| predicted protein [Populus trichocarpa]
gi|222864713|gb|EEF01844.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/341 (70%), Positives = 274/341 (80%), Gaps = 16/341 (4%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHD 60
MKQ TWP RS GSRF +L PI + + S K+ K S SR I+S++G D
Sbjct: 1 MKQSTWPGRSDGSRFKSL--PI------KHQFHQSEFKSTSKFWSASLASRQIRSSDG-D 51
Query: 61 FASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-VRK 119
F+ LPFD+L KIAASFTLP L+AASLVCKSW++ LRPLREAM+ L+WGKRFKHGRG VR
Sbjct: 52 FSKLPFDILTKIAASFTLPNLQAASLVCKSWSEGLRPLREAMLFLKWGKRFKHGRGGVRP 111
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY 179
NL KAL+SFLKGAARGSTLAMVDAGL+YWE+ K+ AI+LY +AA LGD +GQ NLG++Y
Sbjct: 112 NLSKALESFLKGAARGSTLAMVDAGLLYWEIGDKDKAIALYEKAAKLGDRSGQCNLGLAY 171
Query: 180 LQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
LQ +EAVK L+QAS +GHVRAQYQ ALCLH+G GV+ NLQEAARWYL+AAEGGYV
Sbjct: 172 LQAEPSKRKEAVKWLFQASKSGHVRAQYQFALCLHQGSGVNCNLQEAARWYLKAAEGGYV 231
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 293
RAMYN +LCYS GEGL SHR ARKWMKRAAD GH KAQ EHGLGLF+EGE +KAVVYLE
Sbjct: 232 RAMYNVALCYSVGEGLAQSHRLARKWMKRAADRGHSKAQFEHGLGLFSEGEQLKAVVYLE 291
Query: 294 LATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334
LATRAGETAA HVKNVILQQLSATSRDR M + D+WRA+PS
Sbjct: 292 LATRAGETAAAHVKNVILQQLSATSRDRVMNLADNWRALPS 332
>gi|224102439|ref|XP_002312677.1| predicted protein [Populus trichocarpa]
gi|222852497|gb|EEE90044.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/342 (65%), Positives = 265/342 (77%), Gaps = 32/342 (9%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHD 60
MKQ+TWP R R + +F ++ + + R ++S++G D
Sbjct: 1 MKQKTWPGRQY--RQSTFKFWLSSEAD----------------------FRQLRSSDG-D 35
Query: 61 FASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGR-GVRK 119
F++LP D+L KIAASFTLP L+ ASLVCKSW++ LRPLREA++ L+WGKRFKHGR GVR
Sbjct: 36 FSTLPSDILTKIAASFTLPHLQTASLVCKSWSEGLRPLREALLFLKWGKRFKHGRGGVRP 95
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY 179
NLDKALDSFLKGA RGSTLAMVDAGL+YWE+ KK+ AI+LY++AAVLGDP+GQ NLG+SY
Sbjct: 96 NLDKALDSFLKGAVRGSTLAMVDAGLLYWEIGKKDKAIALYKKAAVLGDPSGQCNLGLSY 155
Query: 180 LQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
LQ +EAVK L+QAS +GHVRAQYQLALCLH+G G D +L EAARWYL+AAEGGYV
Sbjct: 156 LQAEPSKRKEAVKWLFQASKSGHVRAQYQLALCLHQGCGFDRHLHEAARWYLKAAEGGYV 215
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 293
RAMY +LCYS GEGL SHRQARKWMKRAAD GH AQ EHGLGLF+EGE +KAVVYLE
Sbjct: 216 RAMYRVALCYSVGEGLAQSHRQARKWMKRAADRGHSNAQYEHGLGLFSEGEKLKAVVYLE 275
Query: 294 LATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSL 335
LAT AGETAA HVKNVILQQL ATSRD M + ++WRA+PSL
Sbjct: 276 LATHAGETAAVHVKNVILQQLPATSRDHVMNLANNWRALPSL 317
>gi|449450432|ref|XP_004142966.1| PREDICTED: F-box protein At1g70590-like isoform 1 [Cucumis sativus]
gi|449500305|ref|XP_004161061.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At1g70590-like
[Cucumis sativus]
Length = 368
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/368 (60%), Positives = 261/368 (70%), Gaps = 32/368 (8%)
Query: 1 MKQRTWPDRSTGSRFTALQFP------ITEKDNRRPELTA---SARKARIKRRSRFSCSR 51
M QRTWPDRS S F++ D+ L A S + + F+ +
Sbjct: 1 MWQRTWPDRSDASPFSSFSLSKLKAKSAIHMDDHHHNLDAYHTSRHTLSTSKSTNFTPTV 60
Query: 52 SI----------------KSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDAL 95
S HDF++LP+DVL KIAASF LP LRAAS VCK+W DA
Sbjct: 61 HPSPSTSSSSQTPFWVRPSSLPSHDFSALPYDVLIKIAASFNLPNLRAASFVCKAWFDAF 120
Query: 96 RPLREAMVLLRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE 154
RPLREAM+ LRWGKRFKHGRG VR N DKAL+SFLKGAARGSTLAMVDAGL+YWEM K
Sbjct: 121 RPLREAMLFLRWGKRFKHGRGGVRPNSDKALNSFLKGAARGSTLAMVDAGLLYWEMGNKN 180
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLH 208
AI+LY++AA LGDP+ + NLGIS+L EAVK L QAS+ G++RAQYQLALCL
Sbjct: 181 DAIALYQKAADLGDPSAKCNLGISFLHAKPPNPTEAVKWLRQASVVGNIRAQYQLALCLQ 240
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+G GVD N+QEAARW+++AAEGGYVRAMYN SLCYS GEGL +H+QA+KWMKRAAD GH
Sbjct: 241 QGHGVDRNVQEAARWFIKAAEGGYVRAMYNLSLCYSCGEGLVHNHQQAKKWMKRAADRGH 300
Query: 269 GKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
KAQ EHGL LF+E +MMKAVVYLELATR+GE AA HVKNVILQQLS +SRDR M V D+
Sbjct: 301 CKAQFEHGLHLFSERDMMKAVVYLELATRSGERAAGHVKNVILQQLSQSSRDRVMSVADN 360
Query: 329 WRAMPSLH 336
WR +PS H
Sbjct: 361 WRPLPSSH 368
>gi|297838865|ref|XP_002887314.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333155|gb|EFH63573.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
Length = 345
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/343 (64%), Positives = 262/343 (76%), Gaps = 9/343 (2%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASAR-KARIKRRSRFSCSRSIKSTE-G 58
MKQRTWP RS GSRFT+L F ++ +R ++ R A+ SR S S S S E G
Sbjct: 1 MKQRTWPCRSEGSRFTSLSFLKPQEKEKRTRFSSINRATAKSSTSSRSSSSSSPLSNEIG 60
Query: 59 HDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-V 117
DF+ LPFD+L KIAA F+ P L+AAS VCKSW DAL+PLRE+M+LLRWGK+FKHGRG V
Sbjct: 61 GDFSMLPFDILMKIAAPFSHPNLQAASSVCKSWRDALKPLRESMLLLRWGKKFKHGRGGV 120
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
R NLDKALDSFLKGAARGSTLAMVDAGL+YWE +KE A+SLYR+AA LGD GQ NLGI
Sbjct: 121 RANLDKALDSFLKGAARGSTLAMVDAGLVYWETGEKEKAMSLYRRAAELGDAVGQCNLGI 180
Query: 178 SYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
YLQ +EA+K L Q++ G+VRAQYQLALCLH+GR V NL EA++WYL+AAEGG
Sbjct: 181 CYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHQGRVVKTNLLEASKWYLKAAEGG 240
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVY 291
YVRAMYN SLCYS GEGLP + + ARKWMKRAAD GH KAQ EHGL LF+EG M+K+V+Y
Sbjct: 241 YVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGHSKAQFEHGLALFSEGAMLKSVLY 300
Query: 292 LELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334
LELA R GE+AA H+K VI QQLSATSR + +WR +P+
Sbjct: 301 LELAERGGESAATHIKEVIHQQLSATSRGHVINQASNWRPLPA 343
>gi|356497357|ref|XP_003517527.1| PREDICTED: F-box protein At1g70590-like [Glycine max]
Length = 327
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/342 (62%), Positives = 255/342 (74%), Gaps = 24/342 (7%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHD 60
MK RTWP F++L + + R E +A AR R+ R + G +
Sbjct: 1 MKHRTWP-----RAFSSLPY------SNRSEFSA-ARSTRLCARPPPPSPPGV----GGE 44
Query: 61 FASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGR-GVRK 119
F+SLP+DVL KIAASF P LRAASLVC++W +ALRPLREAMVLLRWGKRFKHGR GVR
Sbjct: 45 FSSLPYDVLAKIAASFDDPNLRAASLVCRAWCEALRPLREAMVLLRWGKRFKHGRRGVRP 104
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY 179
N+DKALDSF K A RGS LAMVDAGL+YWE +K A+ LY +AA LG+P+ Q NLG+SY
Sbjct: 105 NVDKALDSFTKAAVRGSALAMVDAGLIYWERGEKPKAMELYLKAAELGNPSAQCNLGLSY 164
Query: 180 LQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNLQEAARWYLRAAEGGY 232
LQ E+AVK L +AS+ G+VRAQYQLALCLHR G V NL+EAA+WY++AAEGGY
Sbjct: 165 LQAEPPNTEKAVKWLRKASVCGNVRAQYQLALCLHRSGGRVRSNLKEAAKWYMKAAEGGY 224
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYL 292
VRAMYN SLC+SFGEGL +H+ ARKWMKRAAD GH KAQ EHGL LF+EG+MMKAVVYL
Sbjct: 225 VRAMYNISLCFSFGEGLASNHQLARKWMKRAADRGHSKAQFEHGLALFSEGDMMKAVVYL 284
Query: 293 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334
ELATRAGE A HVKN +L +LS+ SRD AM + +SWRA+PS
Sbjct: 285 ELATRAGEKGAAHVKNAVLHRLSSVSRDHAMHLANSWRALPS 326
>gi|18409624|ref|NP_564992.1| F-box protein [Arabidopsis thaliana]
gi|75165183|sp|Q94C27.1|FB84_ARATH RecName: Full=F-box protein At1g70590
gi|14335050|gb|AAK59789.1| At1g70590/F5A18_23 [Arabidopsis thaliana]
gi|27363348|gb|AAO11593.1| At1g70590/F5A18_23 [Arabidopsis thaliana]
gi|332196965|gb|AEE35086.1| F-box protein [Arabidopsis thaliana]
Length = 351
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/348 (61%), Positives = 258/348 (74%), Gaps = 15/348 (4%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELT----ASARKARIKRRSRFSCSRSIKST 56
MKQRTWP RS GSRF++L F ++R ++ A+A+ R S S S S
Sbjct: 1 MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSN 60
Query: 57 EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG 116
E DF+ LP+D+L KIAA F+ P L+AASLVCKSW DAL+PLRE+M+L+RWGK++KHGRG
Sbjct: 61 EFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRG 120
Query: 117 -VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNL 175
VR NLDKALDSFLKGA RGSTLAMVDAGL+YWE +KE A++LYR+A+ LGD GQ NL
Sbjct: 121 GVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNL 180
Query: 176 GISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
GI+YLQ +EA+K L Q++ G+VRAQYQLALCLH GR V NL EA +WYL+AAE
Sbjct: 181 GIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEATKWYLKAAE 240
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GGYVRAMYN SLCYS GEGLP + + ARKWMKRAAD GH KAQ EHGL LF+EGEM+K+V
Sbjct: 241 GGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGHSKAQFEHGLALFSEGEMLKSV 300
Query: 290 VYLELATRAGETAADHVKNVILQQLSAT----SRDRAMLVVDSWRAMP 333
+YLELA R GE AA VK V+ QQLSAT + A+ ++WR +P
Sbjct: 301 LYLELAERGGEAAATPVKEVVHQQLSATFGGQAVHHAIHQANNWRPLP 348
>gi|356501969|ref|XP_003519795.1| PREDICTED: F-box protein At1g70590-like [Glycine max]
Length = 327
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/296 (67%), Positives = 236/296 (79%), Gaps = 10/296 (3%)
Query: 49 CSRS-IKSTEGH-DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLR 106
C+R + S G DF++LP+DVL KIAASF P LRAASLVC++W +ALRPLREAM LL
Sbjct: 31 CARPPLPSPPGAGDFSALPYDVLAKIAASFDDPNLRAASLVCRAWCEALRPLREAMALLL 90
Query: 107 WGKRFKHG-RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
WGKRFKHG RGV N D+ALDSF+K AARGS LAMVDAGL+YWE +K A+ Y +AA
Sbjct: 91 WGKRFKHGHRGVGPNPDRALDSFIKAAARGSALAMVDAGLIYWERGEKPKAMEFYHKAAE 150
Query: 166 LGDPAGQFNLGISYLQEE------AVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNLQ 218
LG+P+ Q NLG+SYLQ E AVK L++AS+ G+VRAQYQLALCLHRG G V NL+
Sbjct: 151 LGNPSAQCNLGLSYLQAEPPNTELAVKWLHKASVCGNVRAQYQLALCLHRGGGRVRSNLK 210
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
EAA+WY++AAEGGYVRAMYN SLC+SFGEGL +H+ ARKWMKRAAD GH KAQ EHGL
Sbjct: 211 EAAKWYMKAAEGGYVRAMYNISLCFSFGEGLTRNHQLARKWMKRAADRGHSKAQFEHGLA 270
Query: 279 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334
LF+EG+MMKAVVYLELATRAGE A HVKN +L +LS+ SRD AM + +SWRA+PS
Sbjct: 271 LFSEGDMMKAVVYLELATRAGEKGAAHVKNAVLHRLSSASRDHAMHLANSWRALPS 326
>gi|147779938|emb|CAN62303.1| hypothetical protein VITISV_023688 [Vitis vinifera]
Length = 943
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/287 (67%), Positives = 212/287 (73%), Gaps = 49/287 (17%)
Query: 71 KIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-VRKNLDKALDSFL 129
KIAA+FTLP L+ ASLVC+SW D+LRPLREAM+LL+WGKRFKHG G VR N+ KALDSFL
Sbjct: 46 KIAATFTLPDLQTASLVCRSWRDSLRPLREAMLLLKWGKRFKHGHGGVRPNIQKALDSFL 105
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ------EE 183
KGAARGSTLAMVDAGL+YWEM KKE +++LYR+AA LGDP Q NLGISYL EE
Sbjct: 106 KGAARGSTLAMVDAGLIYWEMGKKEESVALYRKAAELGDPTAQCNLGISYLHSEPPKREE 165
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA----------------------- 220
A K LY +S AG+VRAQYQLALCLHRGRG+D NL EA
Sbjct: 166 AAKWLYLSSNAGYVRAQYQLALCLHRGRGMDRNLPEAPTIVKGFREWEYEMWGDNHCTKP 225
Query: 221 -------------------ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261
ARWYL+AAEGGYVRAMYN SLCYS+GEGL SHRQAR+WMK
Sbjct: 226 CSPFVDAIHLVLYLSSPRQARWYLKAAEGGYVRAMYNVSLCYSYGEGLVHSHRQARRWMK 285
Query: 262 RAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKN 308
RAAD GH KAQ EHGLGLF+EGEMMKAVVYLELATRAGETAA HVKN
Sbjct: 286 RAADRGHSKAQFEHGLGLFSEGEMMKAVVYLELATRAGETAAAHVKN 332
>gi|12324759|gb|AAG52341.1|AC011663_20 hypothetical protein; 86186-84430 [Arabidopsis thaliana]
gi|12325035|gb|AAG52462.1|AC010796_1 hypothetical protein; 68316-70072 [Arabidopsis thaliana]
Length = 364
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/361 (55%), Positives = 249/361 (68%), Gaps = 28/361 (7%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELT----ASARKARIKRRSRFSCSRSIKST 56
MKQRTWP RS GSRF++L F ++R ++ A+A+ R S S S S
Sbjct: 1 MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSN 60
Query: 57 EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG 116
E DF+ LP+D+L KIAA F+ P L+AASLVCKSW DAL+PLRE+M+L+RWGK++KHGRG
Sbjct: 61 EFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRG 120
Query: 117 -VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNL 175
VR NLDKALDSFLKGA RGSTLAMVDAGL+YWE +KE A++LYR+A+ LGD GQ NL
Sbjct: 121 GVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNL 180
Query: 176 GISYLQ------EEAVKLLYQASIAGHVRAQYQLAL-------------CLHRGRGVDFN 216
GI+YLQ +EA+K L Q++ G+VRAQYQ L + D
Sbjct: 181 GIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQHVLSSFVETDTAMFGWVIGSFVEADNA 240
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ +WYL+AAEGGYVRAMYN SLCYS GEGLP + + ARKWMKRAAD GH KAQ EHG
Sbjct: 241 MFGHTKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGHSKAQFEHG 300
Query: 277 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT----SRDRAMLVVDSWRAM 332
L LF+EGEM+K+V+YLELA R GE AA VK V+ QQLSAT + A+ ++WR +
Sbjct: 301 LALFSEGEMLKSVLYLELAERGGEAAATPVKEVVHQQLSATFGGQAVHHAIHQANNWRPL 360
Query: 333 P 333
P
Sbjct: 361 P 361
>gi|302812267|ref|XP_002987821.1| hypothetical protein SELMODRAFT_46102 [Selaginella moellendorffii]
gi|300144440|gb|EFJ11124.1| hypothetical protein SELMODRAFT_46102 [Selaginella moellendorffii]
Length = 288
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 160/269 (59%), Positives = 196/269 (72%), Gaps = 6/269 (2%)
Query: 54 KSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH 113
+ E DF+ LPFDVL +I+ F+LP L AAS+VCKSW AL LREA+ ++WGK +KH
Sbjct: 20 QGQEDVDFSQLPFDVLRRISGGFSLPNLWAASMVCKSWYQALSSLREAVTFVKWGKMYKH 79
Query: 114 GRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQ 172
GRG V ++ ALDSFLKGAARG AM+DAGL+ WE ++E I YR+AA LGD AGQ
Sbjct: 80 GRGGVPQDTGMALDSFLKGAARGCAAAMIDAGLLLWEQGRREEGIQWYRKAAELGDAAGQ 139
Query: 173 FNLGISYLQE-----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
NLG++ LQE EAVK +AS AGHVRAQY LALCL +GRGV+ N +AARWYLRA
Sbjct: 140 CNLGLALLQEPVDASEAVKWFQRASDAGHVRAQYSLALCLQQGRGVEPNPGKAARWYLRA 199
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
AEGG RAMYNT+LC+ GEG ++ AR WM+RAA GH KAQ EHGL LF EG+
Sbjct: 200 AEGGSSRAMYNTALCFLSGEGFARNYHHARHWMRRAALAGHRKAQFEHGLTLFAEGDGGL 259
Query: 288 AVVYLELATRAGETAADHVKNVILQQLSA 316
A+ +LELATRAGETAA H+++ ++QQL A
Sbjct: 260 ALAFLELATRAGETAAIHIRDALVQQLPA 288
>gi|302821222|ref|XP_002992275.1| hypothetical protein SELMODRAFT_46104 [Selaginella moellendorffii]
gi|300139925|gb|EFJ06656.1| hypothetical protein SELMODRAFT_46104 [Selaginella moellendorffii]
Length = 288
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/269 (59%), Positives = 195/269 (72%), Gaps = 6/269 (2%)
Query: 54 KSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH 113
+ E DF+ LPFDVL +I+ F+LP L AAS+VCKSW AL LREA+ ++WGK +KH
Sbjct: 20 QGQEDVDFSQLPFDVLRRISGGFSLPNLWAASMVCKSWYQALSSLREAVTFVKWGKMYKH 79
Query: 114 GRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQ 172
GRG V ++ ALDSFLKGAARG AM+DAGL+ WE ++E I YR+AA LGD AGQ
Sbjct: 80 GRGGVPQDTGMALDSFLKGAARGCAAAMIDAGLLLWEQGRREEGIQWYRKAAELGDVAGQ 139
Query: 173 FNLGISYLQE-----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
NLG++ LQE EAVK A+ AGHVRAQY LALCL +GRGV+ N +AARWYLRA
Sbjct: 140 CNLGLALLQEPVDASEAVKWFQTAADAGHVRAQYSLALCLQQGRGVEPNPGKAARWYLRA 199
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
AEGG RAMYNT+LC+ GEG ++ AR WM+RAA GH KAQ EHGL LF EG+
Sbjct: 200 AEGGSSRAMYNTALCFLSGEGFARNYHHARHWMRRAALAGHRKAQFEHGLTLFAEGDGGL 259
Query: 288 AVVYLELATRAGETAADHVKNVILQQLSA 316
A+ +LELATRAGETAA H+++ ++QQL A
Sbjct: 260 ALAFLELATRAGETAAIHIRDALVQQLPA 288
>gi|296083414|emb|CBI23367.3| unnamed protein product [Vitis vinifera]
Length = 193
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/193 (77%), Positives = 164/193 (84%), Gaps = 6/193 (3%)
Query: 150 MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQL 203
M KKE +I+LYR+AA LGDP Q NLGISYL EEA K LY +S AG+VRAQYQL
Sbjct: 1 MGKKEESIALYRKAAELGDPTAQCNLGISYLHSEPPKREEAAKWLYLSSNAGYVRAQYQL 60
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
ALCLHRGRG+D NL EAARWYL+AAEGGYVRAMYN SLCYS+GEGL SHRQAR+WMKRA
Sbjct: 61 ALCLHRGRGMDRNLPEAARWYLKAAEGGYVRAMYNVSLCYSYGEGLVHSHRQARRWMKRA 120
Query: 264 ADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
AD GH KAQ EHGLGLF+EGEMMKAVVYLELATRAGETAA HVKNVILQQLS TSRDRAM
Sbjct: 121 ADRGHSKAQFEHGLGLFSEGEMMKAVVYLELATRAGETAAAHVKNVILQQLSVTSRDRAM 180
Query: 324 LVVDSWRAMPSLH 336
L+ D+WRA+P+ H
Sbjct: 181 LLADNWRALPTSH 193
>gi|357485699|ref|XP_003613137.1| F-box protein [Medicago truncatula]
gi|355514472|gb|AES96095.1| F-box protein [Medicago truncatula]
Length = 393
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/405 (45%), Positives = 233/405 (57%), Gaps = 87/405 (21%)
Query: 2 KQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHDF 61
+TWP S+ S FT+L P +R R S S S +T DF
Sbjct: 3 NNQTWPCTSSSSPFTSLPLP---------------SPSRSIRLCSSSSSSSSSTTSSTDF 47
Query: 62 ASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG-RGVRKN 120
+SLP+D+L KI+ASF P L +ASLVC+SW +ALRPLREAMV+L WGKR KHG RGVRKN
Sbjct: 48 SSLPYDILTKISASFDHPNLESASLVCRSWCEALRPLREAMVMLMWGKRLKHGKRGVRKN 107
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL 180
+KAL+ F K AA+GS LAMVDAGL++WE +K+ A+ Y AA LG+ + Q NLGISYL
Sbjct: 108 TEKALEMFTKAAAKGSALAMVDAGLIHWEKGEKDKALDFYLMAAHLGNASAQCNLGISYL 167
Query: 181 Q------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
Q E+A+K LY+AS G++RAQYQLALCLHR G N++EA +WY++AAEGGY+R
Sbjct: 168 QVEPPNTEQALKWLYKASEGGNIRAQYQLALCLHRAGGNRSNIREAVKWYMKAAEGGYMR 227
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA------ 288
AMYN SLCYSFGEG+ +H+ ARKWMKRAAD GH KAQ EHGL L++ K
Sbjct: 228 AMYNISLCYSFGEGMARNHQIARKWMKRAADRGHTKAQFEHGLALYSRCAQRKILESWER 287
Query: 289 -------------VVYLELA------------------------TRAG--ETAADHVKNV 309
VV+L+ A R G E D +K +
Sbjct: 288 RFPLRRFHTFSTWVVHLDPADPEQLPPSQPSFTCFDLEFDPFIIEREGYIELEGDMIKAL 347
Query: 310 ILQQL--------------------SATSRDRAMLVVDSWRAMPS 334
+ +L SA S + AM + DSWRA+PS
Sbjct: 348 VYLELAGRAGEKGAAHVKNVIVHRISAASHNHAMHLADSWRALPS 392
>gi|167999410|ref|XP_001752410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696310|gb|EDQ82649.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 256
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/256 (58%), Positives = 184/256 (71%), Gaps = 5/256 (1%)
Query: 64 LPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDK 123
LPFDVL +IA SF+ L A+ CK+WN AL PLRE M+ L +GK+FKHG V KNLDK
Sbjct: 1 LPFDVLQRIAGSFSWHDLWNATCTCKTWNKALAPLREGMLFLHYGKKFKHGHEVSKNLDK 60
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE- 182
AL F KGA RG AMVDAGL+ WEM +++ I+ Y+QAA L PAG NLG++YLQ+
Sbjct: 61 ALQMFTKGAIRGCAAAMVDAGLLLWEMGRRDEGINWYKQAAELRHPAGMCNLGLAYLQDS 120
Query: 183 ----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
EAVK L A+ AGHVRAQY LALCL +G+GV+ N+Q+AARWYL+AAEGG R MYN
Sbjct: 121 NRLVEAVKWLKIAATAGHVRAQYSLALCLQQGKGVECNMQKAARWYLQAAEGGSTRGMYN 180
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 298
+LC GEG + +A++WM+RAA GH KAQ E GL LF EGE A+V+LELATRA
Sbjct: 181 VALCLRSGEGFSRNLYEAKRWMRRAAVAGHSKAQFEFGLTLFAEGEGGSALVFLELATRA 240
Query: 299 GETAADHVKNVILQQL 314
GET A H+++ +L QL
Sbjct: 241 GETGATHIRDALLVQL 256
>gi|413918654|gb|AFW58586.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 386
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/300 (47%), Positives = 187/300 (62%), Gaps = 24/300 (8%)
Query: 55 STEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG 114
+ +G DF++LP D++++ A+ + AAS C++W DALRPLREA L +G+R KH
Sbjct: 77 TPQGADFSALPPDLVHRALAAACASDVAAASRACRAWWDALRPLREAAALHAYGRRVKHD 136
Query: 115 ------------------RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
V +AL F + A GS AMVDAGLM WE ++E A
Sbjct: 137 PVTGARAVAAAAASRGGGERVETERQRALGLFRRAARLGSAAAMVDAGLMCWEDGRREEA 196
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRG 210
+ YR AA LG P G NLG+SYL+ EEA++ Y ++ AG+ RAQY L LCL G
Sbjct: 197 VGYYRSAADLGHPIGMCNLGVSYLEADPPKAEEAIRWFYPSASAGNARAQYNLGLCLQNG 256
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
+GV N +EAA+WYLRAAEGG VRAMYN SLCYS+GEGL +A++W++ AADCGH K
Sbjct: 257 KGVKRNQKEAAKWYLRAAEGGNVRAMYNISLCYSYGEGLAQDPVRAKRWLQLAADCGHKK 316
Query: 271 AQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
A E G+ L G+ +K ++YLELATR GE AA H+++VIL+ LS + RAM D W+
Sbjct: 317 ALYECGIKLCAAGDKVKCLMYLELATRRGEAAAAHMRDVILESLSVVNAQRAMSDADKWK 376
>gi|195653363|gb|ACG46149.1| sel1-like repeat [Zea mays]
Length = 358
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/300 (47%), Positives = 187/300 (62%), Gaps = 24/300 (8%)
Query: 55 STEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH- 113
+ +G DF++LP D++++ A+ + AAS C++W DALRPLREA L +G+R KH
Sbjct: 49 TPQGADFSALPPDLVHRALAAACASDVAAASRACRAWWDALRPLREAAALHAYGRRVKHD 108
Query: 114 -----------------GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
G V +AL F + A GS AMVDAGLM WE ++E A
Sbjct: 109 PVTGARAVPAAAASRGGGERVETERQRALGLFRRAARLGSAAAMVDAGLMCWEDGRREEA 168
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRG 210
+ YR AA LG P G NLG+SYL+ EEA++ Y ++ AG+ RAQY L LCL G
Sbjct: 169 VGYYRSAADLGHPIGMCNLGVSYLEADPPKAEEAIRWFYPSASAGNARAQYNLGLCLQNG 228
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
+GV N +EAA+WYLRAAEGG VRAMYN SLCYS+GEGL +A++W++ AADCGH K
Sbjct: 229 KGVKRNQKEAAKWYLRAAEGGNVRAMYNISLCYSYGEGLAQDPVRAKRWLQLAADCGHKK 288
Query: 271 AQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
A E G+ L G+ +K ++YLELATR GE AA H+++VIL+ LS + AM D W+
Sbjct: 289 ALYECGIKLCAAGDKVKCLMYLELATRRGEAAAAHMRDVILESLSVVNAQLAMSDADKWK 348
>gi|357164147|ref|XP_003579964.1| PREDICTED: F-box protein At1g70590-like [Brachypodium distachyon]
Length = 352
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 192/293 (65%), Gaps = 14/293 (4%)
Query: 52 SIKSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRF 111
+ S G DF++LP +++++ ++ + AAS C++W +AL+PLREA L G+R
Sbjct: 52 ATTSGSGADFSALPPELVHRALSASAATDVAAASRACRAWRNALQPLREAAALHAHGRRL 111
Query: 112 KHGR------GVRKNLDK--ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
KHG G ++++ + AL F + A GS AMVDAGLM WE ++ A+ Y++A
Sbjct: 112 KHGPTTSGCDGEKRDVSRQSALGLFQRAAQLGSAAAMVDAGLMCWEEGQRGKAVGYYQRA 171
Query: 164 AVLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
A LG P G NLG+SYL+ EEAV+ Y A+ AG+VRAQY L LCL G+G+ N
Sbjct: 172 AELGHPVGMCNLGVSYLEADPPEAEEAVRWFYPAASAGNVRAQYNLGLCLQNGKGIKRNQ 231
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+EAA+WYLRAAEGG VRAMYN SLCYSFGEG +A+KW++ AA+CGH KA E G+
Sbjct: 232 REAAKWYLRAAEGGNVRAMYNVSLCYSFGEGFTHDPVRAKKWLQLAAECGHRKALYECGI 291
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
L G+ +++++YLELATR GET A H+++VIL+ LS + RA+ D WR
Sbjct: 292 KLCAAGDKVRSLMYLELATRRGETDASHMRDVILESLSVVNAQRALSDADKWR 344
>gi|242073446|ref|XP_002446659.1| hypothetical protein SORBIDRAFT_06g019990 [Sorghum bicolor]
gi|241937842|gb|EES10987.1| hypothetical protein SORBIDRAFT_06g019990 [Sorghum bicolor]
Length = 357
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/291 (46%), Positives = 186/291 (63%), Gaps = 20/291 (6%)
Query: 60 DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG----- 114
DF++LP +++++ A+ + AAS C++W DALRPLREA L +G+R KHG
Sbjct: 59 DFSALPPELVHRALAAACASDVAAASRACRAWRDALRPLREAAALHAFGRRVKHGLVAGP 118
Query: 115 ---------RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
+ +AL F + A GS AMVDAGLM WE ++E A+ YR AA
Sbjct: 119 ASSRGGAGGGRLETERQRALGLFRRAARLGSAAAMVDAGLMCWEDGRREEAVGYYRSAAD 178
Query: 166 LGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
LG P G NLG+S+L+ EEA++ Y ++ AG+ RAQY L LCL G+GV + +E
Sbjct: 179 LGHPVGMCNLGVSFLEADPPKAEEAIRWFYPSASAGNARAQYNLGLCLQNGKGVKRSQKE 238
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
AA+WYLRAAEGG VRAMYN SLCYS+GEGL +A++W++ AADCGH KA E G+ L
Sbjct: 239 AAKWYLRAAEGGNVRAMYNISLCYSYGEGLSQDPVRAKRWLQLAADCGHKKALYECGIKL 298
Query: 280 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
G+ +K+++YLELATR GE AA H+++VI + LS ++ RAM D W+
Sbjct: 299 CAAGDKVKSLMYLELATRRGEYAAAHMRDVIFESLSVVNKQRAMSDADKWK 349
>gi|449450434|ref|XP_004142967.1| PREDICTED: F-box protein At1g70590-like isoform 2 [Cucumis sativus]
Length = 314
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 139/264 (52%), Positives = 166/264 (62%), Gaps = 32/264 (12%)
Query: 1 MKQRTWPDRSTGSRFTALQFP------ITEKDNRRPELTA---SARKARIKRRSRFSCSR 51
M QRTWPDRS S F++ D+ L A S + + F+ +
Sbjct: 1 MWQRTWPDRSDASPFSSFSLSKLKAKSAIHMDDHHHNLDAYHTSRHTLSTSKSTNFTPTV 60
Query: 52 SI----------------KSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDAL 95
S HDF++LP+DVL KIAASF LP LRAAS VCK+W DA
Sbjct: 61 HPSPSTSSSSQTPFWVRPSSLPSHDFSALPYDVLIKIAASFNLPNLRAASFVCKAWFDAF 120
Query: 96 RPLREAMVLLRWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE 154
RPLREAM+ LRWGKRFKHGR GVR N DKAL+SFLKGAARGSTLAMVDAGL+YWEM K
Sbjct: 121 RPLREAMLFLRWGKRFKHGRGGVRPNSDKALNSFLKGAARGSTLAMVDAGLLYWEMGNKN 180
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLH 208
AI+LY++AA LGDP+ + NLGIS+L EAVK L QAS+ G++RAQYQLALCL
Sbjct: 181 DAIALYQKAADLGDPSAKCNLGISFLHAKPPNPTEAVKWLRQASVVGNIRAQYQLALCLQ 240
Query: 209 RGRGVDFNLQEAARWYLRAAEGGY 232
+G GVD N+QEA ++L Y
Sbjct: 241 QGHGVDRNVQEAVCYFLLPISFAY 264
>gi|116310297|emb|CAH67315.1| OSIGBa0106G07.11 [Oryza sativa Indica Group]
Length = 385
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 134/286 (46%), Positives = 185/286 (64%), Gaps = 15/286 (5%)
Query: 60 DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG----- 114
DF++LP +++++ A+ + AAS C++W DALRPLREA L G+R KH
Sbjct: 92 DFSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAA 151
Query: 115 ----RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
G + +AL F + A GS AMVDAGLM WE +++ A+ Y++AA LG P
Sbjct: 152 AAGAEGRKAERQRALGLFQRAARLGSAAAMVDAGLMCWEEGRRDEAVGCYQKAAELGHPV 211
Query: 171 GQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
G NLG+SYL+ EEAV+ Y A+ AG+ RAQY L LCL G+G+ N +EAA+WY
Sbjct: 212 GMCNLGVSYLEADPPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREAAKWY 271
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
LRAAEGG VRAMYN SLCY++GEG ++++W++ AADCGH KA E G+ L G+
Sbjct: 272 LRAAEGGNVRAMYNISLCYNYGEGFSQDQVRSKRWLQLAADCGHKKALYECGIKLCAAGD 331
Query: 285 MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
+++++YLELATR GE AA H+++VIL+ LS + RA+ D WR
Sbjct: 332 KVRSLMYLELATRRGEAAASHMRDVILESLSLVNAQRALSDADKWR 377
>gi|218195049|gb|EEC77476.1| hypothetical protein OsI_16304 [Oryza sativa Indica Group]
Length = 313
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 134/286 (46%), Positives = 185/286 (64%), Gaps = 15/286 (5%)
Query: 60 DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG----- 114
DF++LP +++++ A+ + AAS C++W DALRPLREA L G+R KH
Sbjct: 20 DFSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAA 79
Query: 115 ----RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
G + +AL F + A GS AMVDAGLM WE +++ A+ Y++AA LG P
Sbjct: 80 AAGAEGRKAERQRALGLFQRAARLGSAAAMVDAGLMCWEEGRRDEAVGCYQKAAELGHPV 139
Query: 171 GQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
G NLG+SYL+ EEAV+ Y A+ AG+ RAQY L LCL G+G+ N +EAA+WY
Sbjct: 140 GMCNLGVSYLEADPPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREAAKWY 199
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
LRAAEGG VRAMYN SLCY++GEG ++++W++ AADCGH KA E G+ L G+
Sbjct: 200 LRAAEGGNVRAMYNISLCYNYGEGFSQDQVRSKRWLQLAADCGHKKALYECGIKLCAAGD 259
Query: 285 MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
+++++YLELATR GE AA H+++VIL+ LS + RA+ D WR
Sbjct: 260 KVRSLMYLELATRRGEAAASHMRDVILESLSLVNAQRALSDADKWR 305
>gi|297602909|ref|NP_001053077.2| Os04g0476000 [Oryza sativa Japonica Group]
gi|38344482|emb|CAE05497.2| OSJNBa0022H21.17 [Oryza sativa Japonica Group]
gi|255675552|dbj|BAF14991.2| Os04g0476000 [Oryza sativa Japonica Group]
Length = 381
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/286 (46%), Positives = 185/286 (64%), Gaps = 15/286 (5%)
Query: 60 DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG----- 114
DF++LP +++++ A+ + AAS C++W DALRPLREA L G+R KH
Sbjct: 88 DFSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAA 147
Query: 115 ----RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
G + +AL F + A GS AMVDAGLM WE +++ A+ Y++AA LG P
Sbjct: 148 AAGAEGRKAERQRALGLFQRAARLGSAAAMVDAGLMCWEEGRRDEAVGCYQKAAELGHPV 207
Query: 171 GQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
G NLG+SYL+ EEAV+ Y A+ AG+ RAQY L LCL G+G+ N +EAA+WY
Sbjct: 208 GMCNLGVSYLEADPPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREAAKWY 267
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
LRAAEGG VRAMYN SLCY++GEG ++++W++ AADCGH KA E G+ L G+
Sbjct: 268 LRAAEGGNVRAMYNISLCYNYGEGFSQDQVRSKRWLQLAADCGHKKALYECGIKLCAAGD 327
Query: 285 MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
+++++YLELATR GE AA H+++VIL+ LS + RA+ D WR
Sbjct: 328 KVRSLMYLELATRRGEAAASHMRDVILESLSLVNAQRALSDADKWR 373
>gi|224106137|ref|XP_002333720.1| predicted protein [Populus trichocarpa]
gi|222837996|gb|EEE76361.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/155 (75%), Positives = 131/155 (84%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
++E VK L+QAS +GHVRAQYQLALCLH+G G D +L EAARWYL+AAEGGYVRAMY +
Sbjct: 13 RKEVVKWLFQASKSGHVRAQYQLALCLHQGCGFDRHLHEAARWYLKAAEGGYVRAMYRVA 72
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGE 300
LCYS GEGL SHRQARKWMKRAAD GH AQ EHGLGLF+EGE +KAVVYLELAT AGE
Sbjct: 73 LCYSVGEGLAQSHRQARKWMKRAADRGHSNAQYEHGLGLFSEGEKLKAVVYLELATHAGE 132
Query: 301 TAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSL 335
TAA HVKNVILQQL ATSRD M + ++WRA+PSL
Sbjct: 133 TAAVHVKNVILQQLPATSRDHVMNLANNWRALPSL 167
>gi|413948553|gb|AFW81202.1| hypothetical protein ZEAMMB73_789698 [Zea mays]
Length = 199
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 106/149 (71%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EEA++ Y ++ AG+ RAQY L LCL G+GV N +EAA+WYLRAAEGG VRAMYN SL
Sbjct: 41 EEAIRWFYPSASAGNARAQYNLGLCLQNGKGVKQNQKEAAKWYLRAAEGGNVRAMYNISL 100
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGET 301
CYS+GEGL +A++W++ AADCGH KA E G+ L G+ +K +YLELATR GE
Sbjct: 101 CYSYGEGLGQDPVRAKRWLQLAADCGHKKALYECGIKLCAAGDKVKCFMYLELATRRGEA 160
Query: 302 AADHVKNVILQQLSATSRDRAMLVVDSWR 330
AA H+++VIL+ LS + RAM D W+
Sbjct: 161 AAAHMRDVILESLSVVNAQRAMSDADKWK 189
>gi|224165199|ref|XP_002338784.1| predicted protein [Populus trichocarpa]
gi|222873458|gb|EEF10589.1| predicted protein [Populus trichocarpa]
Length = 119
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/107 (71%), Positives = 88/107 (82%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
++E VK L+QAS +GHVRAQYQLALCLH+G G D +L EAARWYL+AAEGGYVRAMY +
Sbjct: 13 RKEVVKWLFQASKSGHVRAQYQLALCLHQGCGFDRHLHEAARWYLKAAEGGYVRAMYRVA 72
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
LCYS GEGL SHRQARKWMKRAAD GH AQ EHGLGLF++ + K
Sbjct: 73 LCYSVGEGLAQSHRQARKWMKRAADRGHSNAQYEHGLGLFSDRQCRK 119
>gi|222629053|gb|EEE61185.1| hypothetical protein OsJ_15178 [Oryza sativa Japonica Group]
Length = 187
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 107/149 (71%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EEAV+ Y A+ AG+ RAQY L LCL G+G+ N +EAA+WYLRAAEGG VRAMYN SL
Sbjct: 31 EEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREAAKWYLRAAEGGNVRAMYNISL 90
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGET 301
CY++GEG ++++W++ AADCGH KA E G+ L G+ +++++YLELATR GE
Sbjct: 91 CYNYGEGFSQDQVRSKRWLQLAADCGHKKALYECGIKLCAAGDKVRSLMYLELATRRGEA 150
Query: 302 AADHVKNVILQQLSATSRDRAMLVVDSWR 330
AA H+++VIL+ LS + RA+ D WR
Sbjct: 151 AASHMRDVILESLSLVNAQRALSDADKWR 179
>gi|413918655|gb|AFW58587.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 108/193 (55%), Gaps = 24/193 (12%)
Query: 54 KSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH 113
+ +G DF++LP D++++ A+ + AAS C++W DALRPLREA L +G+R KH
Sbjct: 76 PTPQGADFSALPPDLVHRALAAACASDVAAASRACRAWWDALRPLREAAALHAYGRRVKH 135
Query: 114 G------------------RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA 155
V +AL F + A GS AMVDAGLM WE ++E
Sbjct: 136 DPVTGARAVAAAAASRGGGERVETERQRALGLFRRAARLGSAAAMVDAGLMCWEDGRREE 195
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHR 209
A+ YR AA LG P G NLG+SYL+ EEA++ Y ++ AG+ RAQY L LCL
Sbjct: 196 AVGYYRSAADLGHPIGMCNLGVSYLEADPPKAEEAIRWFYPSASAGNARAQYNLGLCLQN 255
Query: 210 GRGVDFNLQEAAR 222
G+GV N +EA R
Sbjct: 256 GKGVKRNQKEAVR 268
>gi|293333051|ref|NP_001169731.1| uncharacterized protein LOC100383612 [Zea mays]
gi|224031245|gb|ACN34698.1| unknown [Zea mays]
Length = 122
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 80/110 (72%)
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
A+WYLRAAEGG VRAMYN SLCYS+GEGL +A++W++ AADCGH KA E G+ L
Sbjct: 3 AKWYLRAAEGGNVRAMYNISLCYSYGEGLAQDPVRAKRWLQLAADCGHKKALYECGIKLC 62
Query: 281 TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
G+ +K ++YLELATR GE AA H+++VIL+ LS + RAM D W+
Sbjct: 63 AAGDKVKCLMYLELATRRGEAAAAHMRDVILESLSVVNAQRAMSDADKWK 112
>gi|424845481|ref|ZP_18270092.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
gi|363986919|gb|EHM13749.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
Length = 365
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 112/227 (49%), Gaps = 18/227 (7%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAG 171
GV ++ KA++ F K A G + A LMY E D AI Y +AA+ G+
Sbjct: 51 GVTEDKAKAIEWFTKAAEAGQSDAQYGLALMYDEGDGVPEDNAKAIEWYTKAALAGNTDA 110
Query: 172 QFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
QFNL + Y + + A++ +A++AG+ AQ+ LAL G GV + +A +W
Sbjct: 111 QFNLALMYDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLALMYDEGEGVPVDKAKAVQW 170
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
Y +AAE G V A YN +L Y GEG+P + +W +AA+ G+GKAQ L ++ EG
Sbjct: 171 YTKAAENGNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEAGNGKAQFNLAL-MYDEG 229
Query: 284 EMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
E + KA+ + A AG A V+ D+A V
Sbjct: 230 EGVPQDKAKAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKAQAV 276
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV ++ KA++ + K A G+T A + LMY E D AI Y +AA+
Sbjct: 82 YDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLALMYDEGDGVPEDNAKAIEWYTKAALA 141
Query: 167 GDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ QFNL + Y + E AV+ +A+ G+V AQY LAL G GV +
Sbjct: 142 GNTDAQFNLALMYDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLALMYDEGEGVPQDKA 201
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+ WY +AAE G +A +N +L Y GEG+P +A +W +AA+ G+GKAQ +
Sbjct: 202 KVIEWYTKAAEAGNGKAQFNLALMYDEGEGVPQDKAKAIEWYTKAAEAGNGKAQFNLAV- 260
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
++ +GE + +AV + A +G +A + ++ + T +D A
Sbjct: 261 MYDDGEGVPEDKAQAVKWYTAAAESGLFSAQYNLAIMHKNGEGTDKDLA 309
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 16/197 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV ++ KA++ + K A G+T A + LMY E + K A+ Y +AA
Sbjct: 118 YDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLALMYDEGEGVPVDKAKAVQWYTKAAEN 177
Query: 167 GDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q+NL + Y + E V + +A+ AG+ +AQ+ LAL G GV +
Sbjct: 178 GNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEAGNGKAQFNLALMYDEGEGVPQDKA 237
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LE 274
+A WY +AAE G +A +N ++ Y GEG+P QA KW AA+ G AQ +
Sbjct: 238 KAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKAQAVKWYTAAAESGLFSAQYNLAIM 297
Query: 275 HGLGLFTEGEMMKAVVY 291
H G T+ ++ KA +
Sbjct: 298 HKNGEGTDKDLAKAYYW 314
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 168 DPAGQFNLGISYLQEE---------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
DP QF LG++Y E A++ +A+ AG AQY LAL G GV +
Sbjct: 34 DPESQFLLGLAYYSGEDGVTEDKAKAIEWFTKAAEAGQSDAQYGLALMYDEGDGVPEDNA 93
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AA G A +N +L Y G+G+P + +A +W +AA G+ AQ L
Sbjct: 94 KAIEWYTKAALAGNTDAQFNLALMYDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLAL- 152
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ EGE + KAV + A G A + ++ + +D+A ++
Sbjct: 153 MYDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLALMYDEGEGVPQDKAKVI 204
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV + KA+ + K A G+ A + LMY E + K I Y +AA
Sbjct: 154 YDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEA 213
Query: 167 GDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ QFNL + Y + E A++ +A+ AG+ +AQ+ LA+ G GV +
Sbjct: 214 GNGKAQFNLALMYDEGEGVPQDKAKAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKA 273
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
+A +WY AAE G A YN ++ + GEG +A W RA
Sbjct: 274 QAVKWYTAAAESGLFSAQYNLAIMHKNGEGTDKDLAKAYYWACRA 318
>gi|260654118|ref|ZP_05859608.1| TPR repeat protein [Jonquetella anthropi E3_33 E1]
gi|260631103|gb|EEX49297.1| TPR repeat protein [Jonquetella anthropi E3_33 E1]
Length = 455
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 114/232 (49%), Gaps = 18/232 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV ++ KA++ + K A G+T A + LMY E + K A+ Y +AA
Sbjct: 136 YDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLALMYDEGEGVPVDKAKAVQWYTKAAEN 195
Query: 167 GDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q+NL + Y + E AV+ +A+ G+V AQY LAL G GV +
Sbjct: 196 GNVGAQYNLALMYDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLALMYDEGEGVPEDDA 255
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G V A YN +L Y GEG+P + +W +AA+ G+GKAQ L
Sbjct: 256 KAVMWYTKAAENGNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEAGNGKAQFNLAL- 314
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ EGE + KA+ + A AG A V+ D+A V
Sbjct: 315 MYDEGEGVPQDKAKAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKAQAV 366
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 18/227 (7%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAG 171
GV ++ KA++ F K A G + A LMY E D AI Y +AA+ G+
Sbjct: 69 GVTEDKAKAIEWFTKAAEAGQSDAQYGLALMYDEGDGVPEDNAKAIEWYTKAALAGNTDA 128
Query: 172 QFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
QFNL + Y + + A++ +A++AG+ AQ+ LAL G GV + +A +W
Sbjct: 129 QFNLALMYDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLALMYDEGEGVPVDKAKAVQW 188
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
Y +AAE G V A YN +L Y GEG+P+ +A +W +AA+ G+ AQ L ++ EG
Sbjct: 189 YTKAAENGNVGAQYNLALMYDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLAL-MYDEG 247
Query: 284 EMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
E + KAV++ A G A + ++ + +D+A ++
Sbjct: 248 EGVPEDDAKAVMWYTKAAENGNVGAQYNLALMYDEGEGVPQDKAKVI 294
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 114/232 (49%), Gaps = 18/232 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV ++ KA++ + K A G+T A + LMY E D AI Y +AA+
Sbjct: 100 YDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLALMYDEGDGVPEDNAKAIEWYTKAALA 159
Query: 167 GDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ QFNL + Y + E AV+ +A+ G+V AQY LAL G GV +
Sbjct: 160 GNTDAQFNLALMYDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLALMYDEGEGVPVDKA 219
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A +WY +AAE G V A YN +L Y GEG+P +A W +AA+ G+ AQ L
Sbjct: 220 KAVQWYTKAAENGNVGAQYNLALMYDEGEGVPEDDAKAVMWYTKAAENGNVGAQYNLAL- 278
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ EGE + K + + A AG A ++ + +D+A +
Sbjct: 279 MYDEGEGVPQDKAKVIEWYTKAAEAGNGKAQFNLALMYDEGEGVPQDKAKAI 330
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G GV + KA+ + K A G+ A + LMY E + A+ Y +AA
Sbjct: 208 YDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLALMYDEGEGVPEDDAKAVMWYTKAAEN 267
Query: 167 GDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q+NL + Y + E V + +A+ AG+ +AQ+ LAL G GV +
Sbjct: 268 GNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEAGNGKAQFNLALMYDEGEGVPQDKA 327
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LE 274
+A WY +AAE G +A +N ++ Y GEG+P QA KW AA+ G AQ +
Sbjct: 328 KAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKAQAVKWYTAAAESGLFSAQYNLAIM 387
Query: 275 HGLGLFTEGEMMKAVVY 291
H G T+ ++ KA +
Sbjct: 388 HKNGEGTDKDLAKAYYW 404
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 144 GLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQ 190
GL Y+ + K AI + +AA G Q+ L + Y + + A++ +
Sbjct: 60 GLAYYSGEDGVTEDKAKAIEWFTKAAEAGQSDAQYGLALMYDEGDGVPEDNAKAIEWYTK 119
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A++AG+ AQ+ LAL G GV + +A WY +AA G A +N +L Y GEG+P
Sbjct: 120 AALAGNTDAQFNLALMYDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLALMYDEGEGVP 179
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADH 305
+ +A +W +AA+ G+ AQ L ++ EGE + KAV + A G A +
Sbjct: 180 VDKAKAVQWYTKAAENGNVGAQYNLAL-MYDEGEGVPVDKAKAVQWYTKAAENGNVGAQY 238
Query: 306 VKNVILQQLSATSRDRAMLVV 326
++ + D A V+
Sbjct: 239 NLALMYDEGEGVPEDDAKAVM 259
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 168 DPAGQFNLGISYLQEE---------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
DP QF LG++Y E A++ +A+ AG AQY LAL G GV +
Sbjct: 52 DPESQFLLGLAYYSGEDGVTEDKAKAIEWFTKAAEAGQSDAQYGLALMYDEGDGVPEDNA 111
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AA G A +N +L Y G+G+P + +A +W +AA G+ AQ L
Sbjct: 112 KAIEWYTKAALAGNTDAQFNLALMYDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLAL- 170
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ EGE + KAV + A G A + ++ + D+A V
Sbjct: 171 MYDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLALMYDEGEGVPVDKAKAV 222
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV ++ KA+ + K A G+ A + LMY E + K I Y +AA
Sbjct: 244 YDEGEGVPEDDAKAVMWYTKAAENGNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEA 303
Query: 167 GDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ QFNL + Y + E A++ +A+ AG+ +AQ+ LA+ G GV +
Sbjct: 304 GNGKAQFNLALMYDEGEGVPQDKAKAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKA 363
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
+A +WY AAE G A YN ++ + GEG +A W RA
Sbjct: 364 QAVKWYTAAAESGLFSAQYNLAIMHKNGEGTDKDLAKAYYWACRA 408
>gi|117925293|ref|YP_865910.1| Sel1 domain-containing protein [Magnetococcus marinus MC-1]
gi|117609049|gb|ABK44504.1| Sel1 domain protein repeat-containing protein [Magnetococcus
marinus MC-1]
Length = 831
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 115/232 (49%), Gaps = 22/232 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GV K+ +A+ + K A +G A + G+MY D KEA + YR+
Sbjct: 421 GVMYNNGEGVTKDAKEAVKWYRKAAEQGHARAQNNLGVMYNNGEGVTKDAKEA-VKWYRK 479
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q +LG+ Y + +EAVK +A+ GH RAQ L + + G GV
Sbjct: 480 AAEQGQAEAQNDLGVMYDKGEGVTKDAKEAVKWYRKAAEQGHARAQNNLGVMYNNGEGVT 539
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +EA +WY +AAE G A +N Y GEG+ ++A KW ++AA+ G KAQ
Sbjct: 540 KDAKEAVKWYRKAAEQGQAEAQHNLGFMYDKGEGVTKDAKEAVKWYRKAAEQGQAKAQ-- 597
Query: 275 HGLG-LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
H LG ++ GE + +AV + + GE A H V+ ++D
Sbjct: 598 HNLGVMYNNGEGVTKDAKEAVKWFRKSAEQGEAKAQHNLGVMYNNGEGVTKD 649
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 24/238 (10%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA------- 155
V G + G+GV K+ +A+ F K A +G A + G+MY DK E
Sbjct: 308 VQFNLGVMYDKGQGVTKDAKEAVKWFRKSAEQGYAQAQHNLGVMY---DKGEGVTKDAKE 364
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ +R++A G Q NLG+ Y + +EAVK +++ GH +AQ+ L +
Sbjct: 365 AVKWFRKSAEQGHAQAQHNLGVMYDKGQGVTKDAKEAVKWFRKSAEQGHAQAQHNLGVMY 424
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ G GV + +EA +WY +AAE G+ RA N + Y+ GEG+ ++A KW ++AA+ G
Sbjct: 425 NNGEGVTKDAKEAVKWYRKAAEQGHARAQNNLGVMYNNGEGVTKDAKEAVKWYRKAAEQG 484
Query: 268 HGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+AQ + G+ ++ +GE + +AV + A G A + V+ ++D
Sbjct: 485 QAEAQNDLGV-MYDKGEGVTKDAKEAVKWYRKAAEQGHARAQNNLGVMYNNGEGVTKD 541
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 22/232 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + +G GV K+ +A+ + K A +G A + G MY DK E A+ Y
Sbjct: 529 GVMYNNGEGVTKDAKEAVKWYRKAAEQGQAEAQHNLGFMY---DKGEGVTKDAKEAVKWY 585
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA G Q NLG+ Y +EAVK +++ G +AQ+ L + + G G
Sbjct: 586 RKAAEQGQAKAQHNLGVMYNNGEGVTKDAKEAVKWFRKSAEQGEAKAQHNLGVMYNNGEG 645
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +EA +W+ ++AE G A N Y GEG+ ++A KW+++AA+ GH AQ
Sbjct: 646 VTKDAKEAVKWFRKSAEQGEAEAQNNLGFMYDNGEGVTKDAKEAVKWLRKAAEQGHANAQ 705
Query: 273 L----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ +G + +AV + + G+ A + V+ + ++D
Sbjct: 706 AFLGQSYDVGYGVTKDAKEAVKWYRKSAEQGQAEAQNNLGVMYDKGQGVTKD 757
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 14/182 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GV K+ +A+ F K A +G A + G+MY D KEA + +R+
Sbjct: 601 GVMYNNGEGVTKDAKEAVKWFRKSAEQGEAKAQHNLGVMYNNGEGVTKDAKEA-VKWFRK 659
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G+ Q NLG Y +EAVK L +A+ GH AQ L G GV
Sbjct: 660 SAEQGEAEAQNNLGFMYDNGEGVTKDAKEAVKWLRKAAEQGHANAQAFLGQSYDVGYGVT 719
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +EA +WY ++AE G A N + Y G+G+ ++A KW ++AA+ G +AQ
Sbjct: 720 KDAKEAVKWYRKSAEQGQAEAQNNLGVMYDKGQGVTKDAKEAVKWYRKAAEQGDARAQFN 779
Query: 275 HG 276
G
Sbjct: 780 LG 781
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 16/182 (8%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
K+AA AA L +P+ QFNLG+ Y + +EAVK +++ G+ +AQ+ L
Sbjct: 290 KDAAKIALGDAAKLANPSVQFNLGVMYDKGQGVTKDAKEAVKWFRKSAEQGYAQAQHNLG 349
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ +G GV + +EA +W+ ++AE G+ +A +N + Y G+G+ ++A KW +++A
Sbjct: 350 VMYDKGEGVTKDAKEAVKWFRKSAEQGHAQAQHNLGVMYDKGQGVTKDAKEAVKWFRKSA 409
Query: 265 DCGHGKAQLEHGLG-LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATS 318
+ GH AQ +H LG ++ GE + +AV + A G A + V+ +
Sbjct: 410 EQGH--AQAQHNLGVMYNNGEGVTKDAKEAVKWYRKAAEQGHARAQNNLGVMYNNGEGVT 467
Query: 319 RD 320
+D
Sbjct: 468 KD 469
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 87 VCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K +A++ R EA G + +G GV K+ +A+ F K A +G A
Sbjct: 610 VTKDAKEAVKWFRKSAEQGEAKAQHNLGVMYNNGEGVTKDAKEAVKWFRKSAEQGEAEAQ 669
Query: 141 VDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISY--------LQEEAVKL 187
+ G MY D KE A+ R+AA G Q LG SY +EAVK
Sbjct: 670 NNLGFMYDNGEGVTKDAKE-AVKWLRKAAEQGHANAQAFLGQSYDVGYGVTKDAKEAVKW 728
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+++ G AQ L + +G+GV + +EA +WY +AAE G RA +N Y GE
Sbjct: 729 YRKSAEQGQAEAQNNLGVMYDKGQGVTKDAKEAVKWYRKAAEQGDARAQFNLGDKYDKGE 788
Query: 248 GLPLSHRQARKWMKRAADCG 267
G+ ++A KW ++AA+ G
Sbjct: 789 GVTKDAKEAVKWYRKAAEQG 808
>gi|449108565|ref|ZP_21745207.1| polymorphic outer membrane protein [Treponema denticola ATCC 33520]
gi|448961366|gb|EMB42071.1| polymorphic outer membrane protein [Treponema denticola ATCC 33520]
Length = 793
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVL 166
+ +G+GV KN A+D + K +G+ A + G+MY+ +DK E A LY++AA
Sbjct: 124 YDNGQGVEKNYTIAIDLYKKAIEQGNAKAQNNLGVMYYNGHGVDKSYEKAFELYKKAAEQ 183
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q NLG Y EA+K +A+ GHV AQ L + G GVD N +
Sbjct: 184 GNAYAQNNLGYMYENGEGVEKNTSEAIKWYTKAAKQGHVYAQSNLGDMYYDGNGVDKNYK 243
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+A WY +AAE GY A Y+ YS GEG+ + +A KW +AAD G AQ
Sbjct: 244 QALEWYTKAAEQGYSYAQYSLGFMYSNGEGVEKNTSEAIKWYTKAADQGVANAQ 297
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 108/224 (48%), Gaps = 19/224 (8%)
Query: 77 TLPQLRAASLVCKSWN----DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGA 132
TLPQ ++ DA EA LL GKR+ G GV K+ KA + F KGA
Sbjct: 52 TLPQNEKPEETISEFDKLKLDAEGGNSEAQYLL--GKRYSDGDGVEKDYKKAFEWFKKGA 109
Query: 133 ARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDPAGQFNLGISYLQ------- 181
+G+ A G+ Y E AI LY++A G+ Q NLG+ Y
Sbjct: 110 DQGNANAQNALGVCYDNGQGVEKNYTIAIDLYKKAIEQGNAKAQNNLGVMYYNGHGVDKS 169
Query: 182 -EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
E+A +L +A+ G+ AQ L G GV+ N EA +WY +AA+ G+V A N
Sbjct: 170 YEKAFELYKKAAEQGNAYAQNNLGYMYENGEGVEKNTSEAIKWYTKAAKQGHVYAQSNLG 229
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
Y G G+ +++QA +W +AA+ G+ AQ G +++ GE
Sbjct: 230 DMYYDGNGVDKNYKQALEWYTKAAEQGYSYAQYSLGF-MYSNGE 272
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G GV KN +A+ + K A +G A G + ++ A ++Y AA G
Sbjct: 265 GFMYSNGEGVEKNTSEAIKWYTKAADQGVANAQDSLGWICEVREEYNKAAAMYLMAAQQG 324
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQE 219
GQ NLG Y V Y+ ++ GH AQ L + G GVD N ++
Sbjct: 325 HANGQNNLGRMYYNGYGVDKDYKQALEWYTKSAEQGHAYAQNNLGYMYYNGYGVDKNYKQ 384
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A WY ++AE G+ A Y+ Y G+G ++A +W ++A+ GH AQ G +
Sbjct: 385 ALEWYTKSAEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWYTKSAEQGHAYAQNNLGY-M 443
Query: 280 FTEGEMMK 287
+ G+ +K
Sbjct: 444 YENGKGVK 451
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVLGDPAGQ 172
VR+ +KA +L A +G + G MY+ +DK + A+ Y ++A G Q
Sbjct: 306 VREEYNKAAAMYLMAAQQGHANGQNNLGRMYYNGYGVDKDYKQALEWYTKSAEQGHAYAQ 365
Query: 173 FNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
NLG Y V Y+ ++ GH AQY L G+G + ++A WY
Sbjct: 366 NNLGYMYYNGYGVDKNYKQALEWYTKSAEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWY 425
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
++AE G+ A N Y G+G+ + + A W K+A + H A+
Sbjct: 426 TKSAEQGHAYAQNNLGYMYENGKGVKIDYDTAISWFKKAVENKHPDAE 473
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G+ + +G GV K+ +AL+ + K A +G A + G MY+ +DK + A+ Y ++
Sbjct: 333 GRMYYNGYGVDKDYKQALEWYTKSAEQGHAYAQNNLGYMYYNGYGVDKNYKQALEWYTKS 392
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q++LG Y +++AV+ +++ GH AQ L G+GV
Sbjct: 393 AEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWYTKSAEQGHAYAQNNLGYMYENGKGVKI 452
Query: 216 NLQEAARWYLRAAE 229
+ A W+ +A E
Sbjct: 453 DYDTAISWFKKAVE 466
>gi|84394204|ref|ZP_00992934.1| hypothetical protein V12B01_19651 [Vibrio splendidus 12B01]
gi|84375186|gb|EAP92103.1| hypothetical protein V12B01_19651 [Vibrio splendidus 12B01]
Length = 942
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 120/237 (50%), Gaps = 22/237 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ GRGV ++ ++++ + K A +G A + G MY E D KEA +S Y++AA
Sbjct: 123 YDEGRGVSQDYEESVSWYRKAAEQGYARAQTNLGWMYKEGRGISQDDKEA-VSWYKKAAE 181
Query: 166 LGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G+ + Q NLG +S +EAV +A+ G+ RAQ L GRGV +
Sbjct: 182 QGEASAQNNLGWMYDEGRGVSQDDKEAVSWYRKAAEQGYARAQTNLGWMYENGRGVSQDD 241
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+EA WY +AAE GYVRA N Y G G+ L +++A W ++AA+ GH +AQ G+
Sbjct: 242 KEAVSWYRKAAEQGYVRAQTNLGWMYEKGIGVSLDNKEAVSWYRKAAEQGHARAQNNLGV 301
Query: 278 GLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
++ EG + +AV + A G A + V+ ++ S++ V SW
Sbjct: 302 -MYEEGRGVSQDYKEAVSWYRKAAEQGNATAQNNLGVMYEKGRGVSQNDKEAV--SW 355
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ GRGV ++ +A+ + K A +G+ A + G+MY + + KEA +S YR+
Sbjct: 300 GVMYEEGRGVSQDYKEAVSWYRKAAEQGNATAQNNLGVMYEKGRGVSQNDKEA-VSWYRK 358
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ Q NLG+ Y + +EAV +A+ G AQ L + G GV
Sbjct: 359 AAEQGNATAQNNLGVMYEKGRGVSQNDKEAVSWYRKAAEQGDASAQNNLGIMYDEGTGVS 418
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+EA WY +AAE GY RA N Y+ G G+ +++A W ++AA+ G+ +AQ +
Sbjct: 419 QGDKEAVSWYRQAAEQGYARAQTNLGWMYADGTGVSQDYKEAVSWYQKAAEQGYARAQTK 478
Query: 275 HGLGLFTEG 283
G ++ EG
Sbjct: 479 LGW-MYVEG 486
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 20/248 (8%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
SW EA G + GRGV ++ +A+ + K A +G A + G MY
Sbjct: 174 SWYKKAAEQGEASAQNNLGWMYDEGRGVSQDDKEAVSWYRKAAEQGYARAQTNLGWMYEN 233
Query: 150 -----MDKKEAAISLYRQAAVLGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGH 196
D KEA +S YR+AA G Q NLG +S +EAV +A+ GH
Sbjct: 234 GRGVSQDDKEA-VSWYRKAAEQGYVRAQTNLGWMYEKGIGVSLDNKEAVSWYRKAAEQGH 292
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
RAQ L + GRGV + +EA WY +AAE G A N + Y G G+ + ++A
Sbjct: 293 ARAQNNLGVMYEEGRGVSQDYKEAVSWYRKAAEQGNATAQNNLGVMYEKGRGVSQNDKEA 352
Query: 257 RKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVIL 311
W ++AA+ G+ AQ G+ ++ +G + +AV + A G+ +A + ++
Sbjct: 353 VSWYRKAAEQGNATAQNNLGV-MYEKGRGVSQNDKEAVSWYRKAAEQGDASAQNNLGIMY 411
Query: 312 QQLSATSR 319
+ + S+
Sbjct: 412 DEGTGVSQ 419
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 20/207 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ G GV + +A+ + K A +G A + G+MY E D KEA +S YR+AA
Sbjct: 267 YEKGIGVSLDNKEAVSWYRKAAEQGHARAQNNLGVMYEEGRGVSQDYKEA-VSWYRKAAE 325
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G+ Q NLG+ Y + +EAV +A+ G+ AQ L + +GRGV N
Sbjct: 326 QGNATAQNNLGVMYEKGRGVSQNDKEAVSWYRKAAEQGNATAQNNLGVMYEKGRGVSQND 385
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+EA WY +AAE G A N + Y G G+ ++A W ++AA+ G+ +AQ G
Sbjct: 386 KEAVSWYRKAAEQGDASAQNNLGIMYDEGTGVSQGDKEAVSWYRQAAEQGYARAQTNLGW 445
Query: 278 GLFTEG-----EMMKAVVYLELATRAG 299
++ +G + +AV + + A G
Sbjct: 446 -MYADGTGVSQDYKEAVSWYQKAAEQG 471
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
EA + Y Q A GD GQFNLG+ Y +AV +A+ GH RAQ L
Sbjct: 26 EAKKAAYFQQAEQGDAHGQFNLGVMYEDGKGVSQDDTQAVSWYRKAAEQGHARAQTNLGR 85
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+GRGV + +EA WY +AAE GY RA N Y G G+ + ++ W ++AA+
Sbjct: 86 MYKKGRGVSQDYEEAVSWYRKAAEQGYARAQTNLGWMYDEGRGVSQDYEESVSWYRKAAE 145
Query: 266 CGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ +AQ G ++ EG + +AV + + A GE +A + + + S+D
Sbjct: 146 QGYARAQTNLGW-MYKEGRGISQDDKEAVSWYKKAAEQGEASAQNNLGWMYDEGRGVSQD 204
Query: 321 RAMLVVDSW 329
V SW
Sbjct: 205 DKEAV--SW 211
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 115/247 (46%), Gaps = 26/247 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G GV ++ +A+ + K A +G A G MY E D KEA + +R+AA
Sbjct: 447 YADGTGVSQDYKEAVSWYQKAAEQGYARAQTKLGWMYVEGTGVSQDDKEAVL-WFRKAAE 505
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G Q NLG Y + EEAV +A+ GH AQ L GRGV N
Sbjct: 506 QGHALAQNNLGAMYAEGRGVSQNYEEAVYWYRKAAERGHALAQNNLGAMYAEGRGVSQNY 565
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+EA WY +A E G + A YN L Y G G+ + +A W ++AA+ GH AQ + L
Sbjct: 566 EEAVSWYRKAIEQGAMDAQYNLGLSYERGVGVIQDYEEAVLWFRKAAEQGHALAQ--NNL 623
Query: 278 G-LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW-- 329
G ++ EG + +AV + AT G A + V+ ++ S+D V SW
Sbjct: 624 GSMYVEGRGISQNYEEAVSWYRKATEQGLALAQNNLGVMHEKGLGVSQDYKEAV--SWYK 681
Query: 330 RAMPSLH 336
+A+ H
Sbjct: 682 KAVEQGH 688
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 18/230 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G GV ++ ++A+ F K A +G LA + G MY E E A+S YR+A
Sbjct: 588 GLSYERGVGVIQDYEEAVLWFRKAAEQGHALAQNNLGSMYVEGRGISQNYEEAVSWYRKA 647
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
G Q NLG+ + + +EAV +A GH AQ L + GRGV
Sbjct: 648 TEQGLALAQNNLGVMHEKGLGVSQDYKEAVSWYKKAVEQGHALAQNNLGVMYGEGRGVSR 707
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +EA WY +AAE G V A +N + Y G G+ ++A W ++AA+ GH ++Q
Sbjct: 708 DDKEAVFWYKKAAEQGVVDAQHNLGMSYEQGAGVSQDDKEAVYWYEKAAEQGHARSQNHL 767
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G ++ EG + +AV + A + G A + V+ + S+D
Sbjct: 768 GW-MYDEGIGVSQDDKEAVSWYGKAAKQGLATAQNNLGVMYAEGRGVSQD 816
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 103/226 (45%), Gaps = 16/226 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G GV ++ +A+ F K A +G LA + G MY E E A+ YR+AA
Sbjct: 483 YVEGTGVSQDDKEAVLWFRKAAEQGHALAQNNLGAMYAEGRGVSQNYEEAVYWYRKAAER 542
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q NLG Y + EEAV +A G + AQY L L RG GV + +
Sbjct: 543 GHALAQNNLGAMYAEGRGVSQNYEEAVSWYRKAIEQGAMDAQYNLGLSYERGVGVIQDYE 602
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LE 274
EA W+ +AAE G+ A N Y G G+ ++ +A W ++A + G AQ +
Sbjct: 603 EAVLWFRKAAEQGHALAQNNLGSMYVEGRGISQNYEEAVSWYRKATEQGLALAQNNLGVM 662
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
H GL + +AV + + A G A + V+ + SRD
Sbjct: 663 HEKGLGVSQDYKEAVSWYKKAVEQGHALAQNNLGVMYGEGRGVSRD 708
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 15/183 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
G GV ++ +A+ + K +G LA + G+MY E D KEA + Y++AA G
Sbjct: 666 GLGVSQDYKEAVSWYKKAVEQGHALAQNNLGVMYGEGRGVSRDDKEA-VFWYKKAAEQGV 724
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
Q NLG+SY Q +EAV +A+ GH R+Q L G GV + +EA
Sbjct: 725 VDAQHNLGMSYEQGAGVSQDDKEAVYWYEKAAEQGHARSQNHLGWMYDEGIGVSQDDKEA 784
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
WY +AA+ G A N + Y+ G G+ +++A W ++A + G AQ G+ ++
Sbjct: 785 VSWYGKAAKQGLATAQNNLGVMYAEGRGVSQDYKEAVSWYRKAMEQGDVDAQNNLGV-MY 843
Query: 281 TEG 283
+G
Sbjct: 844 AKG 846
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV + +A+ + + A +G A + G MY + D KE A+S Y++
Sbjct: 408 GIMYDEGTGVSQGDKEAVSWYRQAAEQGYARAQTNLGWMYADGTGVSQDYKE-AVSWYQK 466
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q LG Y++ +EAV +A+ GH AQ L GRGV
Sbjct: 467 AAEQGYARAQTKLGWMYVEGTGVSQDDKEAVLWFRKAAEQGHALAQNNLGAMYAEGRGVS 526
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 272
N +EA WY +AAE G+ A N Y+ G G+ ++ +A W ++A + G AQ
Sbjct: 527 QNYEEAVYWYRKAAERGHALAQNNLGAMYAEGRGVSQNYEEAVSWYRKAIEQGAMDAQYN 586
Query: 273 ----LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 305
E G+G+ + E +AV++ A G A +
Sbjct: 587 LGLSYERGVGVIQDYE--EAVLWFRKAAEQGHALAQN 621
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 20/233 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + GRGV ++ +A+ + K A +G A + G+ Y + D KE A+ Y +
Sbjct: 696 GVMYGEGRGVSRDDKEAVFWYKKAAEQGVVDAQHNLGMSYEQGAGVSQDDKE-AVYWYEK 754
Query: 163 AAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q +L G+S +EAV +A+ G AQ L + GRGV
Sbjct: 755 AAEQGHARSQNHLGWMYDEGIGVSQDDKEAVSWYGKAAKQGLATAQNNLGVMYAEGRGVS 814
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +EA WY +A E G V A N + Y+ G G+ ++A +AA+ G AQ
Sbjct: 815 QDYKEAVSWYRKAMEQGDVDAQNNLGVMYAKGTGVSRDEKKAVSLYTKAAEQGLATAQYN 874
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
G ++ EG+ + + ++L+LA G+ + +++ ++++ ++A
Sbjct: 875 LG-SMYAEGKGVTKNDKTSYMWLKLAQYNGKEGMQNDFDIMTKRMTLIDVNKA 926
>gi|398863568|ref|ZP_10619128.1| TPR repeat-containing protein [Pseudomonas sp. GM78]
gi|398247343|gb|EJN32792.1| TPR repeat-containing protein [Pseudomonas sp. GM78]
Length = 448
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 99/185 (53%), Gaps = 16/185 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV ++ +A + K A +G + + G+MY D+ +AA S +R+
Sbjct: 263 GVMYAKGVGVAQDKQQAAHWYQKAAEQGYATSQNNLGVMYTNGQGVAQDQHQAA-SWFRK 321
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G QFNLG+ Y ++AV L +A+ G+V AQY L + RG G+
Sbjct: 322 AAEQGFAKAQFNLGVLYFNGRGVAQDRQQAVSLYQKAAEQGYVEAQYNLGVLYFRGEGLT 381
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+L++AA WY +AAE GY A YN L Y+ GEGL + AR W ++AA+ GH AQ
Sbjct: 382 RDLKQAAYWYQKAAEQGYANAQYNLGLMYAKGEGLAPDEQLARTWFQKAAEQGHAGAQ-- 439
Query: 275 HGLGL 279
H L +
Sbjct: 440 HALNI 444
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 111/220 (50%), Gaps = 20/220 (9%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVL 166
++G G+ K+L +A + K A +G A D G+MY + DK++AA Y++AA
Sbjct: 231 RYGWGLEKDLQQAAFWYQKAAEQGQAEAANDLGVMYAKGVGVAQDKQQAA-HWYQKAAEQ 289
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q NLG+ Y Q +A +A+ G +AQ+ L + GRGV + Q
Sbjct: 290 GYATSQNNLGVMYTNGQGVAQDQHQAASWFRKAAEQGFAKAQFNLGVLYFNGRGVAQDRQ 349
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A Y +AAE GYV A YN + Y GEGL +QA W ++AA+ G+ AQ GL
Sbjct: 350 QAVSLYQKAAEQGYVEAQYNLGVLYFRGEGLTRDLKQAAYWYQKAAEQGYANAQYNLGL- 408
Query: 279 LFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQ 313
++ +GE + A + + A G A H N+ +++
Sbjct: 409 MYAKGEGLAPDEQLARTWFQKAAEQGHAGAQHALNITMKK 448
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISY------------LQEEAVKLLYQASIAGHVRAQYQ- 202
A+ R AA G+P Q +LG +Y LQ+ A YQ +
Sbjct: 204 ALEGLRLAAEQGNPEAQHDLGFAYYNGRYGWGLEKDLQQAA--FWYQKAAEQGQAEAAND 261
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L + +G GV + Q+AA WY +AAE GY + N + Y+ G+G+ QA W ++
Sbjct: 262 LGVMYAKGVGVAQDKQQAAHWYQKAAEQGYATSQNNLGVMYTNGQGVAQDQHQAASWFRK 321
Query: 263 AADCGHGKAQLEHGLGLFT 281
AA+ G KAQ G+ F
Sbjct: 322 AAEQGFAKAQFNLGVLYFN 340
>gi|345892024|ref|ZP_08842849.1| hypothetical protein HMPREF1022_01509 [Desulfovibrio sp.
6_1_46AFAA]
gi|345047629|gb|EGW51492.1| hypothetical protein HMPREF1022_01509 [Desulfovibrio sp.
6_1_46AFAA]
Length = 295
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAI 157
M G + G G+ +N +A + K A +G +A + G+MY + D K A
Sbjct: 1 MAQFNLGVMYNQGDGIEQNKAEAAKLYKKAAEQGHAMAQFNLGVMYSQGDGIEQNKAEAT 60
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHR 209
Y++AA G QFNL I Y ++ EA K +A+ G RAQ+ L + +
Sbjct: 61 KWYKKAAEQGLARAQFNLAIMYDEDDGIEQNKAEAAKWYKKAAEQGLARAQFNLGVMYSQ 120
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
G G++ N EA +WY++AAE G+++A +N ++ YS G+G+ +A KW +AA+ G+
Sbjct: 121 GDGIEQNKIEAEKWYIKAAEQGHIKAQFNLAVMYSIGDGIEQDKAEAEKWYIKAAEQGNA 180
Query: 270 KAQL 273
KAQ
Sbjct: 181 KAQF 184
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
AM G + G G+ +N +A + K A +G A + +MY E D K A
Sbjct: 36 AMAQFNLGVMYSQGDGIEQNKAEATKWYKKAAEQGLARAQFNLAIMYDEDDGIEQNKAEA 95
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLH 208
Y++AA G QFNLG+ Y Q EA K +A+ GH++AQ+ LA+
Sbjct: 96 AKWYKKAAEQGLARAQFNLGVMYSQGDGIEQNKIEAEKWYIKAAEQGHIKAQFNLAVMYS 155
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G G++ + EA +WY++AAE G +A +N ++ Y G+G+ R A W ++AA+ H
Sbjct: 156 IGDGIEQDKAEAEKWYIKAAEQGNAKAQFNLAVMYDKGDGVNPDQRTAVSWYQKAAEQRH 215
Query: 269 GKAQLEHGLGLFT----EGEMMKAVVYLEL 294
A LE F +KA V+L L
Sbjct: 216 APAALEMASRYFNGKGVPENYIKAYVFLLL 245
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 9/121 (7%)
Query: 172 QFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
QFNLG+ Y Q EA KL +A+ GH AQ+ L + +G G++ N EA +W
Sbjct: 3 QFNLGVMYNQGDGIEQNKAEAAKLYKKAAEQGHAMAQFNLGVMYSQGDGIEQNKAEATKW 62
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
Y +AAE G RA +N ++ Y +G+ + +A KW K+AA+ G +AQ G+ ++++G
Sbjct: 63 YKKAAEQGLARAQFNLAIMYDEDDGIEQNKAEAAKWYKKAAEQGLARAQFNLGV-MYSQG 121
Query: 284 E 284
+
Sbjct: 122 D 122
>gi|428173028|gb|EKX41933.1| hypothetical protein GUITHDRAFT_158179 [Guillardia theta CCMP2712]
Length = 282
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 18/244 (7%)
Query: 97 PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMD 151
L E L G + G GV ++L KA ++F K A A + G+ Y E+D
Sbjct: 15 ELGEKNALFNLGVCYSQGIGVEEDLVKAFENFKKSADLKDMKAELQVGICYMVGKGTEVD 74
Query: 152 KKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQL 203
+ E A++ +R+AA GD Q+N+G+ + EEA + +A+ G AQ++L
Sbjct: 75 E-EQAVAYFRRAAEQGDATAQYNMGVCNGKGRGVKKSLEEAARWYRKAAEQGDSMAQFRL 133
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
ALCL G+GV + EA RWY +AAE + A++N +CY+ G+G+ H +A + ++A
Sbjct: 134 ALCLATGKGVAKDFPEAIRWYEKAAEQEHGGALFNLGVCYAQGDGVEQDHTKAVSYYRKA 193
Query: 264 ADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 319
AD G AQ GL L T E +A+++ A + G+ A V + +
Sbjct: 194 ADLGVVHAQHNLGLCLLTGQGAEPSPEEALLWYLKAAKQGDAKAQFAAGVCYESGQGVDK 253
Query: 320 DRAM 323
D M
Sbjct: 254 DVDM 257
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 48/198 (24%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ---------------------------------- 181
A++ + +A LG+ FNLG+ Y Q
Sbjct: 6 AVACFFKAGELGEKNALFNLGVCYSQGIGVEEDLVKAFENFKKSADLKDMKAELQVGICY 65
Query: 182 ----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
E+AV +A+ G AQY + +C +GRGV +L+EAARWY +AAE G
Sbjct: 66 MVGKGTEVDEEQAVAYFRRAAEQGDATAQYNMGVCNGKGRGVKKSLEEAARWYRKAAEQG 125
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMK 287
A + +LC + G+G+ +A +W ++AA+ HG A G+ G E + K
Sbjct: 126 DSMAQFRLALCLATGKGVAKDFPEAIRWYEKAAEQEHGGALFNLGVCYAQGDGVEQDHTK 185
Query: 288 AVVYLELATRAGETAADH 305
AV Y A G A H
Sbjct: 186 AVSYYRKAADLGVVHAQH 203
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV+K+L++A + K A +G ++A L D EA I Y +AA
Sbjct: 104 GRGVKKSLEEAARWYRKAAEQGDSMAQFRLALCLATGKGVAKDFPEA-IRWYEKAAEQEH 162
Query: 169 PAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEA 220
FNLG+ Y Q + V+ + +++ G V AQ+ L LCL G+G + + +EA
Sbjct: 163 GGALFNLGVCYAQGDGVEQDHTKAVSYYRKAADLGVVHAQHNLGLCLLTGQGAEPSPEEA 222
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA+ G +A + +CY G+G+ A ++A G+ KA
Sbjct: 223 LLWYLKAAKQGDAKAQFAAGVCYESGQGVDKDVDMAMSLYEQAVKAGNAKA 273
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V KS +A R R+A M R G+GV K+ +A+ + K A + A+
Sbjct: 107 VKKSLEEAARWYRKAAEQGDSMAQFRLALCLATGKGVAKDFPEAIRWYEKAAEQEHGGAL 166
Query: 141 VDAGLMYWEMDKKE----AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLL 188
+ G+ Y + D E A+S YR+AA LG Q NLG+ L EEA+
Sbjct: 167 FNLGVCYAQGDGVEQDHTKAVSYYRKAADLGVVHAQHNLGLCLLTGQGAEPSPEEALLWY 226
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+A+ G +AQ+ +C G+GVD ++ A Y +A + G +AM
Sbjct: 227 LKAAKQGDAKAQFAAGVCYESGQGVDKDVDMAMSLYEQAVKAGNAKAM 274
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+AV ++A G A + L +C +G GV+ +L +A + ++A+ ++A +C
Sbjct: 5 KAVACFFKAGELGEKNALFNLGVCYSQGIGVEEDLVKAFENFKKSADLKDMKAELQVGIC 64
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y G+G + QA + +RAA+ G AQ G+
Sbjct: 65 YMVGKGTEVDEEQAVAYFRRAAEQGDATAQYNMGV 99
>gi|298372182|ref|ZP_06982172.1| TPR repeat protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275086|gb|EFI16637.1| TPR repeat protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 372
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 18/212 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQAAVL 166
+ G+GV ++ KA+ + K A +G+++A + G Y E + E + S + +AA
Sbjct: 84 YNEGKGVEQSYSKAIYWYKKAAEQGNSVAQCNIGFCYNEGEGVEQSYSKAAYWWEKAAEQ 143
Query: 167 GDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q N+G+ Y + E V+ Y +A+ GH AQY + +C G+GV+ +
Sbjct: 144 GNSVAQCNIGVCYSEGEGVEQSYSKAAYWYERAAEQGHSNAQYNIGVCYDEGKGVEQSYS 203
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G A N YS G+G+ S+ +A W K+AA+ GH KAQ G+
Sbjct: 204 KAIYWYKKAAEQGNSDAQCNLGFYYSQGQGVEQSYSKAIYWYKKAAEQGHSKAQFNLGV- 262
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADH 305
+ EG+ + KA+ + + A G + A +
Sbjct: 263 CYDEGKGVEQSYSKAIYWYKKAAEQGHSKAQY 294
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 104/219 (47%), Gaps = 16/219 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + G GV ++ KA + + A +G + A + G+ Y E E AI Y++A
Sbjct: 153 GVCYSEGEGVEQSYSKAAYWYERAAEQGHSNAQYNIGVCYDEGKGVEQSYSKAIYWYKKA 212
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A G+ Q NLG Y Q + V+ Y +I GH +AQ+ L +C G+GV+
Sbjct: 213 AEQGNSDAQCNLGFYYSQGQGVEQSYSKAIYWYKKAAEQGHSKAQFNLGVCYDEGKGVEQ 272
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A WY +AAE G+ +A YN +CY G G+ S+ +A W K+AA+ GH AQ
Sbjct: 273 SYSKAIYWYKKAAEQGHSKAQYNIGVCYYNGNGVEQSYSKAAYWYKKAAEQGHSVAQFNL 332
Query: 276 GLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVI 310
G + E KA+ + A E A N I
Sbjct: 333 GTCYYNGNGVEKSKTKAIYWFRKACNNFEDKACEALNEI 371
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDPA 170
GV ++ KA + A +G + A G Y E E AI Y++AA G+
Sbjct: 52 NGVEQSYSKAAYWLERAAEQGDSDAQCKIGFCYNEGKGVEQSYSKAIYWYKKAAEQGNSV 111
Query: 171 GQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q N+G Y + E V+ Y +A+ G+ AQ + +C G GV+ + +AA
Sbjct: 112 AQCNIGFCYNEGEGVEQSYSKAAYWWEKAAEQGNSVAQCNIGVCYSEGEGVEQSYSKAAY 171
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 278
WY RAAE G+ A YN +CY G+G+ S+ +A W K+AA+ G+ AQ G G
Sbjct: 172 WYERAAEQGHSNAQYNIGVCYDEGKGVEQSYSKAIYWYKKAAEQGNSDAQCNLGFYYSQG 231
Query: 279 LFTEGEMMKAVVYLELATRAGETAA 303
E KA+ + + A G + A
Sbjct: 232 QGVEQSYSKAIYWYKKAAEQGHSKA 256
>gi|189502234|ref|YP_001957951.1| hypothetical protein Aasi_0851 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497675|gb|ACE06222.1| hypothetical protein Aasi_0851 [Candidatus Amoebophilus asiaticus
5a2]
Length = 961
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + GRGV +N KA+ F K A +G A G MY E + AI Y +A
Sbjct: 337 GWMYADGRGVAQNYAKAIKWFQKAANQGHASAQYKLGWMYAEGLGVVKDARKAIEWYERA 396
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD + Q NLG+SY +A+K +A+ GH +QY LA G+GV
Sbjct: 397 AKQGDASAQSNLGVSYANGWGVAKDARKAIKWFQKAADQGHATSQYNLAWMYADGQGVVK 456
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A W+ +AA GYV+A YN Y+ G G+ R+A +W K+AA GH AQL+
Sbjct: 457 DTRKAVEWFQKAANQGYVKAQYNLGWMYAEGRGVDKDARKAIEWYKKAAKQGHADAQLKL 516
Query: 276 GLGLF 280
G F
Sbjct: 517 GARYF 521
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQA 163
G ++ G GV K+ KA++ + K A +G A G+MY E ++K E A+ Y +A
Sbjct: 697 GVIYESGEGVEKDEKKAIEWYEKAANQGHARAQFSLGVMYGEGEGVEKDERKAVEWYEKA 756
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G QF LG Y + V Y +I GH RAQY L +GV
Sbjct: 757 ANQGHARAQFKLGWMYGEGRGVSQDYAKAIEWSEKAANQGHARAQYNLGWIYENWKGVAK 816
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 272
+ +A W+ +AA GY RA YN + Y G+G+ ++++A KW +++ G+ A+
Sbjct: 817 DYAKAVEWFQKAANQGYARAQYNLARMYDHGQGVVQNYQEAVKWYEKSVGQGNNYAKAYL 876
Query: 273 ---LEHGLGLFTEGEMMKAVVYLELA 295
HG G E +++A +E A
Sbjct: 877 GRLYYHGFG--AEKNLLQASKLIEEA 900
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 22/237 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G+GV K++ KA++ + K A +G + Y++ + AI +++
Sbjct: 589 GVIYIEGQGVAKDVRKAIEWYEKAANQGHADVQLKLAARYFKGEGIAKDYAKAIEWFQKT 648
Query: 164 AVLGDPAGQFNLGISYLQEE----------AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
A G Q+NLG Y+ E+ A++ +A+ H ++QY L + G GV
Sbjct: 649 ANQGHANAQYNLG--YVHEKGLGVAKDYVKAIEWYEKAANQEHAKSQYALGVIYESGEGV 706
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ + ++A WY +AA G+ RA ++ + Y GEG+ R+A +W ++AA+ GH +AQ
Sbjct: 707 EKDEKKAIEWYEKAANQGHARAQFSLGVMYGEGEGVEKDERKAVEWYEKAANQGHARAQF 766
Query: 274 EHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ G ++ EG + KA+ + E A G A + I + ++D A V
Sbjct: 767 KLGW-MYGEGRGVSQDYAKAIEWSEKAANQGHARAQYNLGWIYENWKGVAKDYAKAV 822
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 112/266 (42%), Gaps = 18/266 (6%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G ++ G GV K+ KA+ + + A +G + G++Y
Sbjct: 533 AKEWYEKTADQGHAHAQYNLGYMYEKGLGVAKDYVKAIAWYKQAANQGHAKSQYALGVIY 592
Query: 148 WE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------G 195
E AI Y +AA G Q L Y + E + Y +I G
Sbjct: 593 IEGQGVAKDVRKAIEWYEKAANQGHADVQLKLAARYFKGEGIAKDYAKAIEWFQKTANQG 652
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
H AQY L +G GV + +A WY +AA + ++ Y + Y GEG+ ++
Sbjct: 653 HANAQYNLGYVHEKGLGVAKDYVKAIEWYEKAANQEHAKSQYALGVIYESGEGVEKDEKK 712
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVI 310
A +W ++AA+ GH +AQ G+ ++ EGE + KAV + E A G A +
Sbjct: 713 AIEWYEKAANQGHARAQFSLGV-MYGEGEGVEKDERKAVEWYEKAANQGHARAQFKLGWM 771
Query: 311 LQQLSATSRDRAMLVVDSWRAMPSLH 336
+ S+D A + S +A H
Sbjct: 772 YGEGRGVSQDYAKAIEWSEKAANQGH 797
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
L+ G R+ G G+ K+ KA + + K A +G A + G MY + AI+ Y
Sbjct: 514 LKLGARYFKGEGIAKDYAKAKEWYEKTADQGHAHAQYNLGYMYEKGLGVAKDYVKAIAWY 573
Query: 161 RQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+QAA G Q+ LG+ Y++ + A++ +A+ GH Q +LA +G G
Sbjct: 574 KQAANQGHAKSQYALGVIYIEGQGVAKDVRKAIEWYEKAANQGHADVQLKLAARYFKGEG 633
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ + +A W+ + A G+ A YN + G G+ + +A +W ++AA+ H K+Q
Sbjct: 634 IAKDYAKAIEWFQKTANQGHANAQYNLGYVHEKGLGVAKDYVKAIEWYEKAANQEHAKSQ 693
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
G+ G E + KA+ + E A G A V+ + +D
Sbjct: 694 YALGVIYESGEGVEKDEKKAIEWYEKAANQGHARAQFSLGVMYGEGEGVEKDE 746
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + GRGV K+ KA++ + K A +G A + G Y++ + A Y +
Sbjct: 481 GWMYAEGRGVDKDARKAIEWYKKAAKQGHADAQLKLGARYFKGEGIAKDYAKAKEWYEKT 540
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+NLG Y + +A+ QA+ GH ++QY L + G+GV
Sbjct: 541 ADQGHAHAQYNLGYMYEKGLGVAKDYVKAIAWYKQAANQGHAKSQYALGVIYIEGQGVAK 600
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE- 274
++++A WY +AA G+ + Y GEG+ + +A +W ++ A+ GH AQ
Sbjct: 601 DVRKAIEWYEKAANQGHADVQLKLAARYFKGEGIAKDYAKAIEWFQKTANQGHANAQYNL 660
Query: 275 ---HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
H GL + +KA+ + E A + + VI + +D
Sbjct: 661 GYVHEKGLGVAKDYVKAIEWYEKAANQEHAKSQYALGVIYESGEGVEKDE 710
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
HV AQY++ + GRG+ N +A WY +AA+ G+ A N Y+ G G+ ++ +
Sbjct: 293 HVHAQYKVGVMCAEGRGIAKNAAKAVEWYEKAAKQGHAVAQSNLGWMYADGRGVAQNYAK 352
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 303
A KW ++AA+ GH AQ + G ++ EG + KA+ + E A + G+ +A
Sbjct: 353 AIKWFQKAANQGHASAQYKLGW-MYAEGLGVVKDARKAIEWYERAAKQGDASA 404
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 81/214 (37%), Gaps = 55/214 (25%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV K+ KA++ + K A +G A G MY E AI +A
Sbjct: 733 GVMYGEGEGVEKDERKAVEWYEKAANQGHARAQFKLGWMYGEGRGVSQDYAKAIEWSEKA 792
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+NLG Y +AV+ +A+ G+ RAQY LA G+GV
Sbjct: 793 ANQGHARAQYNLGWIYENWKGVAKDYAKAVEWFQKAANQGYARAQYNLARMYDHGQGVVQ 852
Query: 216 NLQEAARWYLRA-------------------------------------------AEGGY 232
N QEA +WY ++ AE G
Sbjct: 853 NYQEAVKWYEKSVGQGNNYAKAYLGRLYYHGFGAEKNLLQASKLIEEAIIHMKSKAEEGC 912
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
+ A Y Y +G G+ H +A W K++A+
Sbjct: 913 IEAQYIVGWMYQYGLGVMQDHVEAAVWYKKSANT 946
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
GI+ +AV+ +A+ GH AQ L GRGV N +A +W+ +AA G+ A
Sbjct: 309 GIAKNAAKAVEWYEKAAKQGHAVAQSNLGWMYADGRGVAQNYAKAIKWFQKAANQGHASA 368
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 291
Y Y+ G G+ R+A +W +RAA G AQ G+ G + KA+ +
Sbjct: 369 QYKLGWMYAEGLGVVKDARKAIEWYERAAKQGDASAQSNLGVSYANGWGVAKDARKAIKW 428
Query: 292 LELATRAGETAADH 305
+ A G + +
Sbjct: 429 FQKAADQGHATSQY 442
>gi|189502236|ref|YP_001957953.1| hypothetical protein Aasi_0854 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497677|gb|ACE06224.1| hypothetical protein Aasi_0854 [Candidatus Amoebophilus asiaticus
5a2]
Length = 684
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 18/210 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEAAISL--YRQAAVL 166
+ G+GV K+ KA++ + K A +G A + GLMY E +K+A L Y +AA
Sbjct: 217 YSKGKGVEKDARKAVEWYEKAAEQGHAGAQFNLGLMYSNGEGVEKDARKELGWYEKAANQ 276
Query: 167 GDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ QFNLG+ Y + E AV+ +A+ G+ RAQ+ L + +G GV+ + +
Sbjct: 277 GNVDAQFNLGVMYAKGEGVEKDARKAVEWYQKAANQGNARAQFNLGVMYAKGEGVEKDAR 336
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AA G RA +N + YS GEG+ R+A +W ++AA+ G+ +AQ G+
Sbjct: 337 KAVEWYQKAANQGNARAQFNLGVMYSKGEGVEKDARKAVEWYEKAANQGNVEAQFNLGV- 395
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAA 303
++ GE + KAV + E A G+ A
Sbjct: 396 MYANGEGVEKDARKAVEWYEKAAEQGDATA 425
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 117/231 (50%), Gaps = 20/231 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV K+ KA++ F K A +G A + GLMY E D ++ A+ Y +
Sbjct: 178 GVMYFNGEGVEKDARKAVEWFQKAAEQGVAGAQFNLGLMYSKGKGVEKDARK-AVEWYEK 236
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G QFNLG+ Y E V+ +A+ G+V AQ+ L + +G GV+
Sbjct: 237 AAEQGHAGAQFNLGLMYSNGEGVEKDARKELGWYEKAANQGNVDAQFNLGVMYAKGEGVE 296
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AA G RA +N + Y+ GEG+ R+A +W ++AA+ G+ +AQ
Sbjct: 297 KDARKAVEWYQKAANQGNARAQFNLGVMYAKGEGVEKDARKAVEWYQKAANQGNARAQFN 356
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ ++++GE + KAV + E A G A V+ +D
Sbjct: 357 LGV-MYSKGEGVEKDARKAVEWYEKAANQGNVEAQFNLGVMYANGEGVEKD 406
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEA--AISLYRQAAVL 166
+ +G GV K+ K L + K A +G+ A + G+MY E +K+A A+ Y++AA
Sbjct: 253 YSNGEGVEKDARKELGWYEKAANQGNVDAQFNLGVMYAKGEGVEKDARKAVEWYQKAANQ 312
Query: 167 GDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ QFNLG+ Y + E AV+ +A+ G+ RAQ+ L + +G GV+ + +
Sbjct: 313 GNARAQFNLGVMYAKGEGVEKDARKAVEWYQKAANQGNARAQFNLGVMYSKGEGVEKDAR 372
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 277
+A WY +AA G V A +N + Y+ GEG+ R+A +W ++AA+ G AQ GL
Sbjct: 373 KAVEWYEKAANQGNVEAQFNLGVMYANGEGVEKDARKAVEWYEKAAEQGDATAQFNLGLM 432
Query: 278 ---GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G E + KAV + + A G A V+ +D
Sbjct: 433 YSKGKGVEKDARKAVEWYQKAANQGNARAQFNLGVMYSNGEGVEKD 478
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 13/199 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEA--AISLYRQA 163
G + G GV K+ KA++ + K A +G+ A + G+MY E +K+A A+ Y +A
Sbjct: 322 GVMYAKGEGVEKDARKAVEWYQKAANQGNARAQFNLGVMYSKGEGVEKDARKAVEWYEKA 381
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QFNLG+ Y E AV+ +A+ G AQ+ L L +G+GV+
Sbjct: 382 ANQGNVEAQFNLGVMYANGEGVEKDARKAVEWYEKAAEQGDATAQFNLGLMYSKGKGVEK 441
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A WY +AA G RA +N + YS GEG+ R+A +W ++AA+ G AQ
Sbjct: 442 DARKAVEWYQKAANQGNARAQFNLGVMYSNGEGVEKDARKAVEWYEKAAEQGDATAQFNL 501
Query: 276 GLGLFTEGEMMKAVVYLEL 294
G+ +++ GE ++ EL
Sbjct: 502 GV-MYSNGEGVEKDAKKEL 519
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV K+ KA++ + K A +G A + GLMY E D ++A + Y++
Sbjct: 394 GVMYANGEGVEKDARKAVEWYEKAAEQGDATAQFNLGLMYSKGKGVEKDARKA-VEWYQK 452
Query: 163 AAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ QFNLG+ Y E AV+ +A+ G AQ+ L + G GV+
Sbjct: 453 AANQGNARAQFNLGVMYSNGEGVEKDARKAVEWYEKAAEQGDATAQFNLGVMYSNGEGVE 512
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++ WY +AAE G A +N + YS G G+ ++ +W K+AA G+ AQ
Sbjct: 513 KDAKKELEWYKKAAEQGDATAQFNLGVMYSKGLGVEKDAKKELEWYKKAAAQGNASAQFN 572
Query: 275 ----HGLGLFTEGEMMKAVVYLELATRAGETAADH 305
+G GL E + K + + E A G A H
Sbjct: 573 LGVRYGEGLGVEKDAKKELEWYEKAAEQGHVKAQH 607
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 118/220 (53%), Gaps = 19/220 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEAAISL--YRQA 163
G + +G GV K+ KA++ + K A +G A + G+MY E +K+A L Y++A
Sbjct: 466 GVMYSNGEGVEKDARKAVEWYEKAAEQGDATAQFNLGVMYSNGEGVEKDAKKELEWYKKA 525
Query: 164 AVLGDPAGQFNLGISY-----LQEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDF 215
A GD QFNLG+ Y ++++A K L +A+ G+ AQ+ L + G GV+
Sbjct: 526 AEQGDATAQFNLGVMYSKGLGVEKDAKKELEWYKKAAAQGNASAQFNLGVRYGEGLGVEK 585
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++ WY +AAE G+V+A +N + Y+ GEG ++ +A +W +AA+ AQ
Sbjct: 586 DAKKELEWYEKAAEQGHVKAQHNLAWMYANGEGTAQNYTKAIEWYGKAAEKEDADAQFNL 645
Query: 276 GLGLFTEGEMM-----KAVVYLELATRAGE-TAADHVKNV 309
G ++ +GE + KA + + A G+ A + +KN+
Sbjct: 646 GQ-MYEKGEGVAKDCAKAAEWYQKAAEKGDLDAQERLKNM 684
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-- 147
W + +A G + G+GV K+ KA++ + K A +G+ A + G+MY
Sbjct: 412 EWYEKAAEQGDATAQFNLGLMYSKGKGVEKDARKAVEWYQKAANQGNARAQFNLGVMYSN 471
Query: 148 WEMDKKEA--AISLYRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHV 197
E +K+A A+ Y +AA GD QFNLG+ Y E V + +A+ G
Sbjct: 472 GEGVEKDARKAVEWYEKAAEQGDATAQFNLGVMYSNGEGVEKDAKKELEWYKKAAEQGDA 531
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQ+ L + +G GV+ + ++ WY +AA G A +N + Y G G+ ++
Sbjct: 532 TAQFNLGVMYSKGLGVEKDAKKELEWYKKAAAQGNASAQFNLGVRYGEGLGVEKDAKKEL 591
Query: 258 KWMKRAADCGHGKAQLEHGLG-LFTEGE 284
+W ++AA+ GH KAQ H L ++ GE
Sbjct: 592 EWYEKAAEQGHVKAQ--HNLAWMYANGE 617
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 162 QAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
Q A GD QFNLG+ Y E AV+ +A+ G AQ+ L L +G+GV
Sbjct: 164 QKAEQGDARAQFNLGVMYFNGEGVEKDARKAVEWFQKAAEQGVAGAQFNLGLMYSKGKGV 223
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ + ++A WY +AAE G+ A +N L YS GEG+ R+ W ++AA+ G+ AQ
Sbjct: 224 EKDARKAVEWYEKAAEQGHAGAQFNLGLMYSNGEGVEKDARKELGWYEKAANQGNVDAQF 283
Query: 274 EHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ ++ +GE + KAV + + A G A V+ + +D
Sbjct: 284 NLGV-MYAKGEGVEKDARKAVEWYQKAANQGNARAQFNLGVMYAKGEGVEKD 334
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
Q E + Q + G RAQ+ L + G GV+ + ++A W+ +AAE G A +N
Sbjct: 155 QTEGLPQQLQKAEQGDARAQFNLGVMYFNGEGVEKDARKAVEWFQKAAEQGVAGAQFNLG 214
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELA 295
L YS G+G+ R+A +W ++AA+ GH AQ GL +++ GE + K + + E A
Sbjct: 215 LMYSKGKGVEKDARKAVEWYEKAAEQGHAGAQFNLGL-MYSNGEGVEKDARKELGWYEKA 273
Query: 296 TRAGETAADHVKNVILQQLSATSRD 320
G A V+ + +D
Sbjct: 274 ANQGNVDAQFNLGVMYAKGEGVEKD 298
>gi|148262856|ref|YP_001229562.1| Sel1 domain-containing protein [Geobacter uraniireducens Rf4]
gi|146396356|gb|ABQ24989.1| Sel1 domain protein repeat-containing protein [Geobacter
uraniireducens Rf4]
Length = 393
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 116/218 (53%), Gaps = 24/218 (11%)
Query: 89 KSWND-----ALRPLR---EAMVLLRWGKRFKHGRGVRK-NLDKALDSFLKGAARGSTLA 139
+++ND A+R R A L G + G+GV K N +A+ + K A +G A
Sbjct: 30 RAYNDGDYATAMREYRIDGSARSLFNLGLMYAEGKGVNKRNSREAMKWYRKAAEQGLAKA 89
Query: 140 MVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNL--------GISYLQEEAVK 186
GLMY DKKEAA YR+AA G A Q+NL G+ + EA K
Sbjct: 90 QFALGLMYALGEDVAADKKEAA-RWYRKAAEQGHAAAQYNLAQMYARGDGVKKDETEADK 148
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
+A+ G+ AQ LA +G GV + +EAARWYL+AAE G VRA ++ ++ Y G
Sbjct: 149 WYRKAAEQGNAAAQLNLAQLYEKGAGVVQDKKEAARWYLKAAEQGNVRAQFSIAMMYDKG 208
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+G+ + ++A +W +RAA+ H KAQ + G L+ +G+
Sbjct: 209 DGVEQNKKEAARWFRRAAEQNHAKAQFKIGF-LYDKGD 245
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 15/190 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G GV+K+ +A + K A +G+ A ++ +Y + DKKEAA Y +AA
Sbjct: 133 YARGDGVKKDETEADKWYRKAAEQGNAAAQLNLAQLYEKGAGVVQDKKEAA-RWYLKAAE 191
Query: 166 LGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G+ QF++ G+ ++EA + +A+ H +AQ+++ +G GV +
Sbjct: 192 QGNVRAQFSIAMMYDKGDGVEQNKKEAARWFRRAAEQNHAKAQFKIGFLYDKGDGVLQDK 251
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+EA +WY +AAE G A +N L Y G G+P + A +W ++AAD G AQ G
Sbjct: 252 KEAVKWYRKAAERGVSEARFNLGLMYYAGSGVPQDKKAAARWFRKAADQGDVDAQFNLGH 311
Query: 278 GLFTEGEMMK 287
++ +G+ +K
Sbjct: 312 -MYDQGDGIK 320
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 112/228 (49%), Gaps = 21/228 (9%)
Query: 73 AASFTLPQLRA-ASLVCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKAL 125
AA + L Q+ A V K +A + R+A L + ++ G GV ++ +A
Sbjct: 124 AAQYNLAQMYARGDGVKKDETEADKWYRKAAEQGNAAAQLNLAQLYEKGAGVVQDKKEAA 183
Query: 126 DSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISY- 179
+LK A +G+ A +MY E +KKEAA +R+AA QF +G Y
Sbjct: 184 RWYLKAAEQGNVRAQFSIAMMYDKGDGVEQNKKEAA-RWFRRAAEQNHAKAQFKIGFLYD 242
Query: 180 -----LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
LQ+ EAVK +A+ G A++ L L + G GV + + AARW+ +AA+ G
Sbjct: 243 KGDGVLQDKKEAVKWYRKAAERGVSEARFNLGLMYYAGSGVPQDKKAAARWFRKAADQGD 302
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
V A +N Y G+G+ ++A KW ++AA+ G +AQ GL F
Sbjct: 303 VDAQFNLGHMYDQGDGIKQDRKEAVKWYRKAAEQGFDQAQFNLGLMYF 350
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 14/174 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G GV +N +A F + A + A G +Y + DKKEA + YR+AA
Sbjct: 205 YDKGDGVEQNKKEAARWFRRAAEQNHAKAQFKIGFLYDKGDGVLQDKKEA-VKWYRKAAE 263
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G +FNLG+ Y ++ A + +A+ G V AQ+ L +G G+ +
Sbjct: 264 RGVSEARFNLGLMYYAGSGVPQDKKAAARWFRKAADQGDVDAQFNLGHMYDQGDGIKQDR 323
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+EA +WY +AAE G+ +A +N L Y G G+ + ++A KW +AA+ G +A
Sbjct: 324 KEAVKWYRKAAEQGFDQAQFNLGLMYFHGYGVKQNRKEAFKWFVKAAEQGSDEA 377
>gi|295112076|emb|CBL28826.1| FOG: TPR repeat, SEL1 subfamily [Synergistetes bacterium SGP1]
Length = 488
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 12/177 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G R++ GRG+ +N +A + + + A +G A + G MY++ E A+ YR+A
Sbjct: 297 GLRYEEGRGIERNNVRAAEWYQRAAEQGLADAQFNLGTMYYDGQGVEQDYSKAVMWYRKA 356
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A GD QFNLG+ Y + ++ Y +A+ G AQ+ L + +G++
Sbjct: 357 AGQGDAEAQFNLGVMYYGGQGIEQDYAKAAMWYRRAAEQGVAAAQFNLGVMYSENQGLER 416
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N +AA W+LRAAE GY A +N L Y GEG+ H +A KW ++AA+ G AQ
Sbjct: 417 NYAKAAEWFLRAAEQGYTAAQFNLGLLYEEGEGVEQDHEEAIKWYRKAAEAGDIDAQ 473
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 18/213 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G ++ GRGV +N +A + + K A++G A + GL Y E +++ A Y++A
Sbjct: 261 GIMYEEGRGVEQNDIEATEWYRKAASQGIPAAQFNLGLRYEEGRGIERNNVRAAEWYQRA 320
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A G QFNLG Y + V+ Y ++ G AQ+ L + + G+G++
Sbjct: 321 AEQGLADAQFNLGTMYYDGQGVEQDYSKAVMWYRKAAGQGDAEAQFNLGVMYYGGQGIEQ 380
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +AA WY RAAE G A +N + YS +GL ++ +A +W RAA+ G+ AQ
Sbjct: 381 DYAKAAMWYRRAAEQGVAAAQFNLGVMYSENQGLERNYAKAAEWFLRAAEQGYTAAQFNL 440
Query: 276 GLGLFTEGEMM-----KAVVYLELATRAGETAA 303
GL L+ EGE + +A+ + A AG+ A
Sbjct: 441 GL-LYEEGEGVEQDHEEAIKWYRKAAEAGDIDA 472
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA- 155
EA + G ++ GRGV + KA + +L+ A +G A G+MY E +++ A
Sbjct: 73 EATAQCKLGIMYEEGRGVEQGDAKAAEWYLRAAEQGEATAQCKLGIMYEEGRGVEQDNAK 132
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ YR+AA+ G+ GQF LG+ Y + ++A K + + G Q+ +
Sbjct: 133 AVMWYRKAAIQGNVEGQFRLGVMYTKGWGIEKDYKKAAKWYRKVAEQGVSGVQFIVGAMY 192
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G GV+ N EAA WY +AAE G A + G+G+ + +A W +++AD
Sbjct: 193 EKGEGVEQNYTEAAEWYRKAAEQGNATAQCKLGIMCEEGQGVEQNDAEAATWYRKSADQN 252
Query: 268 HGKAQLEHGLGLFTEG 283
+AQ G+ ++ EG
Sbjct: 253 VPEAQFNLGI-MYEEG 267
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G ++ GV +N KA + +L+ A +G A G+MY E +++ +A A Y +A
Sbjct: 45 GIMYEDAIGVEQNDHKAAEWYLRAAEQGEATAQCKLGIMYEEGRGVEQGDAKAAEWYLRA 104
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ Q LGI Y + +AV +A+I G+V Q++L + +G G++
Sbjct: 105 AEQGEATAQCKLGIMYEEGRGVEQDNAKAVMWYRKAAIQGNVEGQFRLGVMYTKGWGIEK 164
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++AA+WY + AE G + Y GEG+ ++ +A +W ++AA+ G+ AQ +
Sbjct: 165 DYKKAAKWYRKVAEQGVSGVQFIVGAMYEKGEGVEQNYTEAAEWYRKAAEQGNATAQCKL 224
Query: 276 GL 277
G+
Sbjct: 225 GI 226
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W--EMDKKE 154
EA + G ++ GRGV ++ KA+ + K A +G+ G+MY W E D K+
Sbjct: 109 EATAQCKLGIMYEEGRGVEQDNAKAVMWYRKAAIQGNVEGQFRLGVMYTKGWGIEKDYKK 168
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALC 206
AA YR+ A G QF +G Y + E V+ Y +A+ G+ AQ +L +
Sbjct: 169 AA-KWYRKVAEQGVSGVQFIVGAMYEKGEGVEQNYTEAAEWYRKAAEQGNATAQCKLGIM 227
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G+GV+ N EAA WY ++A+ A +N + Y G G+ + +A +W ++AA
Sbjct: 228 CEEGQGVEQNDAEAATWYRKSADQNVPEAQFNLGIMYEEGRGVEQNDIEATEWYRKAASQ 287
Query: 267 GHGKAQLEHGL 277
G AQ GL
Sbjct: 288 GIPAAQFNLGL 298
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 103/235 (43%), Gaps = 18/235 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISL 159
R G + G G+ K+ KA + K A +G + G MY E + EAA
Sbjct: 150 FRLGVMYTKGWGIEKDYKKAAKWYRKVAEQGVSGVQFIVGAMYEKGEGVEQNYTEAA-EW 208
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVK-------LLYQASIAGHV-RAQYQLALCLHRGR 211
YR+AA G+ Q LGI + + V+ Y+ S +V AQ+ L + GR
Sbjct: 209 YRKAAEQGNATAQCKLGIMCEEGQGVEQNDAEAATWYRKSADQNVPEAQFNLGIMYEEGR 268
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV+ N EA WY +AA G A +N L Y G G+ ++ +A +W +RAA+ G A
Sbjct: 269 GVEQNDIEATEWYRKAASQGIPAAQFNLGLRYEEGRGIERNNVRAAEWYQRAAEQGLADA 328
Query: 272 QLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
Q G G E + KAV++ A G+ A V+ +D A
Sbjct: 329 QFNLGTMYYDGQGVEQDYSKAVMWYRKAAGQGDAEAQFNLGVMYYGGQGIEQDYA 383
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 173 FNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+NLG L EE A + + G AQ L + GV+ N +AA WYLRAA
Sbjct: 10 YNLGGQALSEENYSRAFAYFLECAKRGEADAQSILGIMYEDAIGVEQNDHKAAEWYLRAA 69
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
E G A + Y G G+ +A +W RAA+ G AQ + G+ ++ EG
Sbjct: 70 EQGEATAQCKLGIMYEEGRGVEQGDAKAAEWYLRAAEQGEATAQCKLGI-MYEEG 123
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G+ +N KA + FL+ A +G T A + GL+Y E + E AI YR+A
Sbjct: 405 GVMYSENQGLERNYAKAAEWFLRAAEQGYTAAQFNLGLLYEEGEGVEQDHEEAIKWYRKA 464
Query: 164 AVLGDPAGQFNL 175
A GD Q L
Sbjct: 465 AEAGDIDAQSKL 476
>gi|319639039|ref|ZP_07993797.1| hypothetical protein HMPREF0604_01421 [Neisseria mucosa C102]
gi|317399943|gb|EFV80606.1| hypothetical protein HMPREF0604_01421 [Neisseria mucosa C102]
Length = 339
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 137/280 (48%), Gaps = 29/280 (10%)
Query: 68 VLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRW--GKRFKHGRGVRKNLDKAL 125
+L IA SF+ QL A V ++ + LR + +V ++ G+ +++G+GVRK+ +A+
Sbjct: 9 MLGMIALSFS--QLVWADNV-PNFQETLRAAEQGVVAAQYNLGQMYRNGQGVRKDYAEAV 65
Query: 126 DSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQAAVLGDPAGQFNLGIS 178
+ K A +G A + G+MY D A+ YR+AA G Q+NLG+
Sbjct: 66 KWYRKAAEQGYAQAQYNLGVMY---DNGRGVRQDYIQAVQWYRKAAEQGLADAQYNLGMM 122
Query: 179 YLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y + V+ Y ++ G +AQY L L +G+GV + +A RWY +AAE
Sbjct: 123 YANGQGVRQDYAEAVRWFRKTAEQGLAKAQYNLGLSYAQGQGVSQDYVQAVRWYRKAAEQ 182
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM---- 286
G+ A N + Y G+G+ + A +W ++AA+ GH AQ+ G+ ++ +G+ +
Sbjct: 183 GHADAQNNLGVMYDNGKGVRQDYTNAVQWYRKAAEQGHAGAQINLGM-MYEKGQGVHQNY 241
Query: 287 -KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
KAV + A G A + V+ +D A V
Sbjct: 242 AKAVEWYHKAAEQGHAQAQNNLGVMYDNGQGVRQDYAQAV 281
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + G+GV ++ +A+ + K A +G A + G+MY D + A+ Y
Sbjct: 156 GLSYAQGQGVSQDYVQAVRWYRKAAEQGHADAQNNLGVMY---DNGKGVRQDYTNAVQWY 212
Query: 161 RQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA G Q NLG+ Y + + AV+ ++A+ GH +AQ L + G+G
Sbjct: 213 RKAAEQGHAGAQINLGMMYEKGQGVHQNYAKAVEWYHKAAEQGHAQAQNNLGVMYDNGQG 272
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +A +WYL+AAE GY A YN L Y G+G+ S A++W K+A C +G Q
Sbjct: 273 VRQDYAQAVQWYLKAAEQGYADAQYNLGLMYEKGQGVRQSKIVAKEWFKKA--CANGDKQ 330
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+GVR++ +A+ F K A +G A + GL Y + A+ YR+A
Sbjct: 120 GMMYANGQGVRQDYAEAVRWFRKTAEQGLAKAQYNLGLSYAQGQGVSQDYVQAVRWYRKA 179
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG+ Y + V+ Y +A+ GH AQ L + +G+GV
Sbjct: 180 AEQGHADAQNNLGVMYDNGKGVRQDYTNAVQWYRKAAEQGHAGAQINLGMMYEKGQGVHQ 239
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N +A WY +AAE G+ +A N + Y G+G+ + QA +W +AA+ G+ AQ
Sbjct: 240 NYAKAVEWYHKAAEQGHAQAQNNLGVMYDNGQGVRQDYAQAVQWYLKAAEQGYADAQYNL 299
Query: 276 GLGLFTEGE 284
GL ++ +G+
Sbjct: 300 GL-MYEKGQ 307
>gi|333368363|ref|ZP_08460569.1| hypothetical protein HMPREF9373_0974 [Psychrobacter sp. 1501(2011)]
gi|332977421|gb|EGK14198.1| hypothetical protein HMPREF9373_0974 [Psychrobacter sp. 1501(2011)]
Length = 423
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
+ GRGV ++ +KAL +LK A++ A V+ G++Y++ E A+ + +AA
Sbjct: 203 YDEGRGVPQDYNKALKWYLKAASQDYVDAYVNLGVLYYQGHGVEVDYAKAVQWFLKAAQE 262
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
+ GQ NLGI Y E A +A++ G +AQY L + G GV+++ +
Sbjct: 263 DNAIGQLNLGIMYENGLGVEQDFEMAASWYKKAAVKGDGQAQYSLGMLYDSGYGVEYDPR 322
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+A WY +AA+ G A YN ++ Y GEG+P ++A KW +AAD +GKA G
Sbjct: 323 QAVAWYQKAADQGMAEAQYNLAMSYYLGEGVPKDFKKAIKWYTQAADQDYGKASYNLG 380
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 64 LPFDVLNKIAASFTLPQLRAASL-VCKSWNDALRPLREAM------VLLRWGKRFKHGRG 116
LP + A +T+ L V + +N AL+ +A + G + G G
Sbjct: 185 LPAADKGNVDAQYTMATLYDEGRGVPQDYNKALKWYLKAASQDYVDAYVNLGVLYYQGHG 244
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAG 171
V + KA+ FLK A + + ++ G+MY E D E A S Y++AAV GD
Sbjct: 245 VEVDYAKAVQWFLKAAQEDNAIGQLNLGIMYENGLGVEQDF-EMAASWYKKAAVKGDGQA 303
Query: 172 QFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
Q++LG + Y +AV +A+ G AQY LA+ + G GV + ++A +W
Sbjct: 304 QYSLGMLYDSGYGVEYDPRQAVAWYQKAADQGMAEAQYNLAMSYYLGEGVPKDFKKAIKW 363
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
Y +AA+ Y +A YN Y G+G+ S +A+KW +RA
Sbjct: 364 YTQAADQDYGKASYNLGTMYYNGDGVTQSCSEAKKWFERA 403
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 13/181 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPA 170
GV ++ KA + K A G+ A + G+MY E A+ Y++AA GD
Sbjct: 63 EGVTQDYKKAFQWYQKAAVNGNADAQFNLGVMYHEGRGVAKNITKAMQWYKKAADQGDKD 122
Query: 171 GQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q+NLGI Y +EA+K +A+ G + AQY++ G GVD ++ +A +
Sbjct: 123 AQYNLGILYENGIGIAQDYQEALKWYLKAAQQGDLHAQYKIGWFYESGHGVDPDMSKAIK 182
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
WYL AA+ G V A Y + Y G G+P + +A KW +AA + A + G+ L+ +
Sbjct: 183 WYLPAADKGNVDAQYTMATLYDEGRGVPQDYNKALKWYLKAASQDYVDAYVNLGV-LYYQ 241
Query: 283 G 283
G
Sbjct: 242 G 242
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 125/279 (44%), Gaps = 39/279 (13%)
Query: 45 SRFSCSRSIKSTEGHDFASLPFDVLN----KIAASFTLPQLR---------AASLVCKSW 91
SRF+ + I T SLP L+ ++ A PQ + + V + +
Sbjct: 10 SRFNAASLIALTTALLVTSLPAKALDLLTTEVLAEQDSPQEQFNLGWIYETGSEGVTQDY 69
Query: 92 NDALRPLREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL 145
A + ++A V G + GRGV KN+ KA+ + K A +G A + G+
Sbjct: 70 KKAFQWYQKAAVNGNADAQFNLGVMYHEGRGVAKNITKAMQWYKKAADQGDKDAQYNLGI 129
Query: 146 MYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQAS 192
+Y D +EA + Y +AA GD Q+ +G Y +A+K A+
Sbjct: 130 LYENGIGIAQDYQEA-LKWYLKAAQQGDLHAQYKIGWFYESGHGVDPDMSKAIKWYLPAA 188
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
G+V AQY +A GRGV + +A +WYL+AA YV A N + Y G G+ +
Sbjct: 189 DKGNVDAQYTMATLYDEGRGVPQDYNKALKWYLKAASQDYVDAYVNLGVLYYQGHGVEVD 248
Query: 253 HRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEM 285
+ +A +W +AA + QL E+GLG+ + EM
Sbjct: 249 YAKAVQWFLKAAQEDNAIGQLNLGIMYENGLGVEQDFEM 287
>gi|222086265|ref|YP_002544797.1| hypothetical protein Arad_2749 [Agrobacterium radiobacter K84]
gi|221723713|gb|ACM26869.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 393
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 29/237 (12%)
Query: 93 DALRPLR---EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
D RPL +A L+ G+ +K G G+ K+L +AL + K A +G+ A D G MY
Sbjct: 39 DYWRPLANKGDAAAQLKLGEMYKLGDGIEKDLKQALKWYRKAAEQGNAKAEFDLGAMY-- 96
Query: 150 MDKKEA-------AISLYRQAAVLGDPAGQFNLGISYLQEEAVK-------LLY-QASIA 194
DK E AI YR+AA G Q+NLG+ Y + E V + Y +A+
Sbjct: 97 -DKGEGIAKDHAQAILWYRKAADQGYADAQYNLGVIYDEGEGVPKDRTLAFVWYSKAAEQ 155
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ AQ+ + + G GVD + +A WY +AA+ G V A YN ++ Y GEG+
Sbjct: 156 GNAAAQFNVGVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYNLAIMYDSGEGITKDSG 215
Query: 255 QARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLELATRAGETAADH 305
QA W ++AAD G +AQ G G+ +G +AV + A G+ A +
Sbjct: 216 QALSWYRKAADQGKIEAQYNLAVMYRDGAGVPKDG--ARAVTWFRKAADQGDADAQY 270
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV K+ A + K A +G+ A + G+MY D K AI+ YR+AA
Sbjct: 132 YDEGEGVPKDRTLAFVWYSKAAEQGNAAAQFNVGVMYDNGDGVDQDKSQAIAWYRKAADQ 191
Query: 167 GDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q+NL I Y E A+ +A+ G + AQY LA+ G GV +
Sbjct: 192 GNVDAQYNLAIMYDSGEGITKDSGQALSWYRKAADQGKIEAQYNLAVMYRDGAGVPKDGA 251
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
A W+ +AA+ G A YN Y+ G+G+ +A W ++AAD G + E+ LG
Sbjct: 252 RAVTWFRKAADQGDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAAD--QGDVEAEYNLG 309
Query: 279 -LFTEGE 284
++ +GE
Sbjct: 310 VMYRDGE 316
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLG--------ISYLQEEAVKL 187
S LA D G ++ +AA+ +R A GD A Q LG I ++A+K
Sbjct: 17 SGLAHADTGQNAYDRGDHKAALDYWRPLANKGDAAAQLKLGEMYKLGDGIEKDLKQALKW 76
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+A+ G+ +A++ L +G G+ + +A WY +AA+ GY A YN + Y GE
Sbjct: 77 YRKAAEQGNAKAEFDLGAMYDKGEGIAKDHAQAILWYRKAADQGYADAQYNLGVIYDEGE 136
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETA 302
G+P A W +AA+ G+ AQ G+ ++ G+ + +A+ + A G
Sbjct: 137 GVPKDRTLAFVWYSKAAEQGNAAAQFNVGV-MYDNGDGVDQDKSQAIAWYRKAADQGNVD 195
Query: 303 ADHVKNVILQQLSATSRDRAMLVVDSW 329
A + ++ ++D + SW
Sbjct: 196 AQYNLAIMYDSGEGITKDSGQAL--SW 220
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + +G GV ++ +A+ + K A +G+ A + +MY D E A+S Y
Sbjct: 165 GVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYNLAIMY---DSGEGITKDSGQALSWY 221
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA G Q+NL + Y AV +A+ G AQY L G G
Sbjct: 222 RKAADQGKIEAQYNLAVMYRDGAGVPKDGARAVTWFRKAADQGDADAQYNLGTMYADGDG 281
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ + EA W+ +AA+ G V A YN + Y GEG+ + +A W ++AA + A
Sbjct: 282 IAEDDVEAIAWFRKAADQGDVEAEYNLGVMYRDGEGVAKNGPEAVGWFEKAAAENYADAA 341
Query: 273 LEHGLGLFTEGEMMKA 288
L G+ ++ +G+ + A
Sbjct: 342 LNLGV-MYRDGDGVPA 356
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVL 166
+ G G+ K+ +AL + K A +G A + +MY + + K A A++ +R+AA
Sbjct: 204 YDSGEGITKDSGQALSWYRKAADQGKIEAQYNLAVMYRDGAGVPKDGARAVTWFRKAADQ 263
Query: 167 GDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q+NLG Y EA+ +A+ G V A+Y L + G GV N
Sbjct: 264 GDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAADQGDVEAEYNLGVMYRDGEGVAKNGP 323
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
EA W+ +AA Y A N + Y G+G+P ++ +W RA
Sbjct: 324 EAVGWFEKAAAENYADAALNLGVMYRDGDGVPADRAKSLEWFSRA 368
>gi|398380210|ref|ZP_10538328.1| TPR repeat-containing protein [Rhizobium sp. AP16]
gi|397721526|gb|EJK82074.1| TPR repeat-containing protein [Rhizobium sp. AP16]
Length = 393
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 29/237 (12%)
Query: 93 DALRPLR---EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
D RPL +A L+ G+ +K G G+ K+L +AL + K A +G+ A D G MY
Sbjct: 39 DYWRPLANKGDATAQLKLGEMYKLGDGIEKDLKQALKWYRKAADQGNAKAEFDLGAMY-- 96
Query: 150 MDKKEA-------AISLYRQAAVLGDPAGQFNLGISYLQEEAVK-------LLY-QASIA 194
DK E AI YR+AA G Q+NLG+ Y + E V + Y +A+
Sbjct: 97 -DKGEGMAKNHAQAILWYRKAADQGYADAQYNLGVIYDEGEGVPKDRTLAFVWYSKAAEQ 155
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ AQ+ + + G GVD + +A WY +AA+ G V A YN ++ Y GEG+
Sbjct: 156 GNAAAQFNVGVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYNLAIMYDSGEGITKDSG 215
Query: 255 QARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLELATRAGETAADH 305
QA W ++AAD G +AQ G G+ +G +AV + A G+ A +
Sbjct: 216 QALAWYRKAADQGKIEAQYNLAVMYRDGAGVPKDG--AQAVTWFRKAADQGDADAQY 270
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 15/187 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV K+ A + K A +G+ A + G+MY D K AI+ YR+AA
Sbjct: 132 YDEGEGVPKDRTLAFVWYSKAAEQGNAAAQFNVGVMYDNGDGVDQDKSQAIAWYRKAADQ 191
Query: 167 GDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q+NL I Y E A+ +A+ G + AQY LA+ G GV +
Sbjct: 192 GNVDAQYNLAIMYDSGEGITKDSGQALAWYRKAADQGKIEAQYNLAVMYRDGAGVPKDGA 251
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A W+ +AA+ G A YN Y+ G+G+ +A W ++AAD G + E+ LG
Sbjct: 252 QAVTWFRKAADQGDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAAD--QGDVEAEYNLG 309
Query: 279 -LFTEGE 284
++ +GE
Sbjct: 310 VMYRDGE 316
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLG--------ISYLQEEAVKL 187
S LA D G ++ +AA+ +R A GD Q LG I ++A+K
Sbjct: 17 SGLAHADTGQNAYDQGDHKAALDYWRPLANKGDATAQLKLGEMYKLGDGIEKDLKQALKW 76
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+A+ G+ +A++ L +G G+ N +A WY +AA+ GY A YN + Y GE
Sbjct: 77 YRKAADQGNAKAEFDLGAMYDKGEGMAKNHAQAILWYRKAADQGYADAQYNLGVIYDEGE 136
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETA 302
G+P A W +AA+ G+ AQ G+ ++ G+ + +A+ + A G
Sbjct: 137 GVPKDRTLAFVWYSKAAEQGNAAAQFNVGV-MYDNGDGVDQDKSQAIAWYRKAADQGNVD 195
Query: 303 ADHVKNVILQQLSATSRD 320
A + ++ ++D
Sbjct: 196 AQYNLAIMYDSGEGITKD 213
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + +G GV ++ +A+ + K A +G+ A + +MY D E A++ Y
Sbjct: 165 GVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYNLAIMY---DSGEGITKDSGQALAWY 221
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA G Q+NL + Y +AV +A+ G AQY L G G
Sbjct: 222 RKAADQGKIEAQYNLAVMYRDGAGVPKDGAQAVTWFRKAADQGDADAQYNLGTMYADGDG 281
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ + EA W+ +AA+ G V A YN + Y GEG+ + +A W ++AA + A
Sbjct: 282 IAEDDVEAIAWFRKAADQGDVEAEYNLGVMYRDGEGVAKNGPEAVGWFEKAAAENYADAA 341
Query: 273 LEHGLGLFTEGEMMKA 288
L G+ ++ +G+ + A
Sbjct: 342 LNLGV-MYRDGDGVPA 356
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVL 166
+ G G+ K+ +AL + K A +G A + +MY + + K A A++ +R+AA
Sbjct: 204 YDSGEGITKDSGQALAWYRKAADQGKIEAQYNLAVMYRDGAGVPKDGAQAVTWFRKAADQ 263
Query: 167 GDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q+NLG Y EA+ +A+ G V A+Y L + G GV N
Sbjct: 264 GDADAQYNLGTMYADGDGIAEDDVEAIAWFRKAADQGDVEAEYNLGVMYRDGEGVAKNGP 323
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
EA W+ +AA Y A N + Y G+G+P ++ +W RA
Sbjct: 324 EAVGWFEKAAAENYADAALNLGVMYRDGDGVPADRAKSLEWFSRA 368
>gi|148826779|ref|YP_001291532.1| Sel1 domain-containing protein [Haemophilus influenzae PittGG]
gi|148718021|gb|ABQ99148.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae PittGG]
Length = 398
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 23/247 (9%)
Query: 95 LRPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-- 149
L+PL E A+ G ++ GRGV+++ +A+ + K A +G A + G+MY
Sbjct: 51 LQPLAEQGDAIAQFLLGGMYEEGRGVKQDDFEAVKWYRKAAEQGYADAQFNLGVMYERGR 110
Query: 150 ---MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVR 198
D EA + YR+AA G+ + QFNLG+ Y + EAVK +A+ GH +
Sbjct: 111 GVRQDVFEA-VKWYRKAAEQGNASVQFNLGLMYSKGQGVKQDDFEAVKWYRKAAEQGHAK 169
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQY L GRGV + EA +WY +AAE GY A +N Y G G+ +A K
Sbjct: 170 AQYNLGNMYANGRGVKQDGFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEAVK 229
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQ 313
W ++AA+ GH KAQ G ++ G + + V + A GE A V+ +
Sbjct: 230 WYRKAAEQGHAKAQYNLG-NMYANGRGVKQDYFETVKWYRKAAEQGEAKAQFNLGVMYAK 288
Query: 314 LSATSRD 320
+D
Sbjct: 289 GRGVKQD 295
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 18/220 (8%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEA 155
A V G + G+GV+++ +A+ + K A +G A + G MY + D EA
Sbjct: 132 ASVQFNLGLMYSKGQGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDGFEA 191
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCL 207
+ YR+AA G QFNLG Y EAVK +A+ GH +AQY L
Sbjct: 192 -VKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEAVKWYRKAAEQGHAKAQYNLGNMY 250
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + E +WY +AAE G +A +N + Y+ G G+ + +A KW ++AA+ G
Sbjct: 251 ANGRGVKQDYFETVKWYRKAAEQGEAKAQFNLGVMYAKGRGVKQDYFEAVKWYRKAAEQG 310
Query: 268 HGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 303
+ AQL G GL + + ++AV + A G+ A
Sbjct: 311 YADAQLNLGNMYAKGLGVKQDDVEAVKWYRKAAEQGDADA 350
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +GRGV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 175 GNMYANGRGVKQDGFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEA-VKWYRK 233
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q+NLG Y VK Y +A+ G +AQ+ L + +GRGV
Sbjct: 234 AAEQGHAKAQYNLGNMYANGRGVKQDYFETVKWYRKAAEQGEAKAQFNLGVMYAKGRGVK 293
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ EA +WY +AAE GY A N Y+ G G+ +A KW ++AA+ G AQ
Sbjct: 294 QDYFEAVKWYRKAAEQGYADAQLNLGNMYAKGLGVKQDDVEAVKWYRKAAEQGDADAQ 351
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQA 191
M+ +Y + D K A +++ + A GD QF LG Y + EAVK +A
Sbjct: 32 MIQVEQLYKQKDFK-AMLAILQPLAEQGDAIAQFLLGGMYEEGRGVKQDDFEAVKWYRKA 90
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
+ G+ AQ+ L + RGRGV ++ EA +WY +AAE G +N L YS G+G+
Sbjct: 91 AEQGYADAQFNLGVMYERGRGVRQDVFEAVKWYRKAAEQGNASVQFNLGLMYSKGQGVKQ 150
Query: 252 SHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
+A KW ++AA+ GH KAQ G ++ G +K
Sbjct: 151 DDFEAVKWYRKAAEQGHAKAQYNLG-NMYANGRGVK 185
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 16/191 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV+++ +A+ + K A +G A + G MY + D E + YR+
Sbjct: 211 GNMYYNGHGVKQDDVEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDYFET-VKWYRK 269
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ QFNLG+ Y + EAVK +A+ G+ AQ L +G GV
Sbjct: 270 AAEQGEAKAQFNLGVMYAKGRGVKQDYFEAVKWYRKAAEQGYADAQLNLGNMYAKGLGVK 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA +WY +AAE G A Y G+G+ + A++W+ +A D GH +A E
Sbjct: 330 QDDVEAVKWYRKAAEQGDADAQALLGFAYLLGKGVQFNKSLAKEWLGKACDNGH-QAGCE 388
Query: 275 HGLGLFTEGEM 285
+ G GE+
Sbjct: 389 Y-YGKLNRGEL 398
>gi|39997985|ref|NP_953936.1| SEL1 repeat-containing protein [Geobacter sulfurreducens PCA]
gi|409913341|ref|YP_006891806.1| SEL1 repeat-containing protein [Geobacter sulfurreducens KN400]
gi|39984930|gb|AAR36286.1| SEL1 repeat-containing protein [Geobacter sulfurreducens PCA]
gi|298506926|gb|ADI85649.1| SEL1 repeat-containing protein [Geobacter sulfurreducens KN400]
Length = 245
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 103/200 (51%), Gaps = 15/200 (7%)
Query: 90 SWNDALRPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM 146
+ ALR RE A R G + +G GV +N +AL + K A G A G M
Sbjct: 40 DYETALREYREDGGAQACYRIGTLYDNGFGVPENKQEALKWYHKAADLGLDQAQHRIGEM 99
Query: 147 YWEMDKKE----AAISLYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIA 194
Y E A+S Y +AA G QF +G Y + VK L QA+
Sbjct: 100 YDNGRGVEENPVTALSWYLKAAEQGMAIAQFKVGDMYYTGKGVKQDVALGVKWLQQAAKM 159
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G++RAQY++A GR + ++ EAA+WYLRAAE G+ RA Y +L + GEG+
Sbjct: 160 GNIRAQYEIATMYETGRELKKDISEAAKWYLRAAEQGHSRAQYTIALLFLKGEGVRQDRA 219
Query: 255 QARKWMKRAADCGHGKAQLE 274
+A KW+++AA+ GH KAQ++
Sbjct: 220 EAVKWLRKAAEGGHTKAQMD 239
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 175 LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
G+ ++EA+K ++A+ G +AQ+++ GRGV+ N A WYL+AAE G
Sbjct: 68 FGVPENKQEALKWYHKAADLGLDQAQHRIGEMYDNGRGVEENPVTALSWYLKAAEQGMAI 127
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV---- 290
A + Y G+G+ KW+++AA G+ +AQ E T E+ K +
Sbjct: 128 AQFKVGDMYYTGKGVKQDVALGVKWLQQAAKMGNIRAQYEIATMYETGRELKKDISEAAK 187
Query: 291 -YLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
YL A + G + A + ++ + +DRA V
Sbjct: 188 WYLRAAEQ-GHSRAQYTIALLFLKGEGVRQDRAEAV 222
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +A Y++ G GV N QEA +WY +AA+ G +A + Y G G+ +
Sbjct: 52 GGAQACYRIGTLYDNGFGVPENKQEALKWYHKAADLGLDQAQHRIGEMYDNGRGVEENPV 111
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADH 305
A W +AA+ G AQ + G ++ G+ +K V +L+ A + G A +
Sbjct: 112 TALSWYLKAAEQGMAIAQFKVG-DMYYTGKGVKQDVALGVKWLQQAAKMGNIRAQY 166
>gi|284799409|ref|ZP_05983910.2| TPR repeat protein [Neisseria subflava NJ9703]
gi|284797776|gb|EFC53123.1| TPR repeat protein [Neisseria subflava NJ9703]
Length = 420
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 113/220 (51%), Gaps = 21/220 (9%)
Query: 87 VCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K + AL+ R +A+ G + +G GV ++ +A+ + K A +G+ A
Sbjct: 170 VGKDYEKALKWFRRAAGHGDAIGQYNLGVAYANGEGVHQDYIQAIGWYRKAAEQGNVDAQ 229
Query: 141 VDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKL 187
+ G MY D EA I YR+AA GD QFNLG+ YLQ +AV+
Sbjct: 230 YNLGDMYASGEGVRQDYVEA-IKWYRKAAEQGDAQAQFNLGMMYLQGQGVRQDNAQAVQW 288
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+A+ GH +AQY L + G+G+ + +A RWY +AAE G +A +N + Y G+
Sbjct: 289 FGRAAEQGHAKAQYNLGVMYANGQGIRQDDVQAVRWYHKAAEQGVAQAQFNLGIMYDQGQ 348
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
G+ QA W ++AA+ G+ +AQ G+ ++ GE ++
Sbjct: 349 GVRQDDAQAVHWYRKAAEQGYAEAQYNFGV-MYANGEGVR 387
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 20/236 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A + + K A +G T A + G++Y D +AA YR
Sbjct: 89 GVMYQLGQGVGQDYVQAAEWYRKAAEQGDTGAQNNLGMLYQNGQGVSQDYAQAAEWFYR- 147
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASI------AGHVRA--QYQLALCLHRGRGVD 214
AA + Q NLG+ Y + V Y+ ++ AGH A QY L + G GV
Sbjct: 148 AANQENTDAQLNLGMLYANGQGVGKDYEKALKWFRRAAGHGDAIGQYNLGVAYANGEGVH 207
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY +AAE G V A YN Y+ GEG+ + +A KW ++AA+ G +AQ
Sbjct: 208 QDYIQAIGWYRKAAEQGNVDAQYNLGDMYASGEGVRQDYVEAIKWYRKAAEQGDAQAQFN 267
Query: 275 HGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
G+ ++ +G+ ++ AV + A G A + V+ +D V
Sbjct: 268 LGM-MYLQGQGVRQDNAQAVQWFGRAAEQGHAKAQYNLGVMYANGQGIRQDDVQAV 322
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 23/289 (7%)
Query: 68 VLNKIAASFTLPQLRAASLVCKSWNDALRPLREA--MVLLRWGKRFKHGRGVRKNLDKAL 125
++ + A F L Q A + + + LR + L G + +G+G+ ++ A+
Sbjct: 12 IIMGVMACFGLGQAALAESI-PDFKNMLRAAEQGDPEAQLSIGAMYANGQGISQDNRLAV 70
Query: 126 DSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYL 180
F K A + + A + G+MY D +AA YR+AA GD Q NLG+ Y
Sbjct: 71 QWFRKAAEQENAKAQFNLGVMYQLGQGVGQDYVQAA-EWYRKAAEQGDTGAQNNLGMLYQ 129
Query: 181 QEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
+ V + Y+A+ + AQ L + G+GV + ++A +W+ RAA G
Sbjct: 130 NGQGVSQDYAQAAEWFYRAANQENTDAQLNLGMLYANGQGVGKDYEKALKWFRRAAGHGD 189
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMK 287
YN + Y+ GEG+ + QA W ++AA+ G+ AQ G ++ GE ++
Sbjct: 190 AIGQYNLGVAYANGEGVHQDYIQAIGWYRKAAEQGNVDAQYNLG-DMYASGEGVRQDYVE 248
Query: 288 AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 336
A+ + A G+ A ++ Q +D A V RA H
Sbjct: 249 AIKWYRKAAEQGDAQAQFNLGMMYLQGQGVRQDNAQAVQWFGRAAEQGH 297
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 71 KIAASFTLPQLRAASL-VCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDK 123
+ A + L + A+ V + + +A++ R +A G + G+GVR++ +
Sbjct: 225 NVDAQYNLGDMYASGEGVRQDYVEAIKWYRKAAEQGDAQAQFNLGMMYLQGQGVRQDNAQ 284
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGIS 178
A+ F + A +G A + G+MY D +A + Y +AA G QFNLGI
Sbjct: 285 AVQWFGRAAEQGHAKAQYNLGVMYANGQGIRQDDVQA-VRWYHKAAEQGVAQAQFNLGIM 343
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y Q +AV +A+ G+ AQY + G GV N + A W+ +A +
Sbjct: 344 YDQGQGVRQDDAQAVHWYRKAAEQGYAEAQYNFGVMYANGEGVRQNYKIAKDWFGKACDN 403
Query: 231 GYVRA 235
G R
Sbjct: 404 GLQRG 408
>gi|154498247|ref|ZP_02036625.1| hypothetical protein BACCAP_02235 [Bacteroides capillosus ATCC
29799]
gi|150272794|gb|EDM99962.1| Sel1 repeat protein [Pseudoflavonifractor capillosus ATCC 29799]
Length = 1017
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 16/191 (8%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EM 150
R AM +L G +++G GV K+ +A++ + + A +G +A+ D GL Y E
Sbjct: 516 RNFARAMDIL--GDCYRNGTGVEKDEVRAVELYRQAAEQGYAMAICDLGLCYEMGSGVER 573
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQ 202
D+K+A + YR+AA +G P Q NLG L+ EEAVK A+ G+ RAQ
Sbjct: 574 DEKKA-VEHYRKAAQMGYPGAQCNLGYCCLEGVGTVKRPEEAVKWFRLAAEQGYPRAQSL 632
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L CL G G + +EA +WY +AAE GY A + LCY G+G +A + +R
Sbjct: 633 LGSCLRDGMGTQPDEKEAVKWYTKAAEQGYPPAQCSLGLCYENGDGTQQDPVRAAELYRR 692
Query: 263 AADCGHGKAQL 273
AAD G+ AQ
Sbjct: 693 AADQGYAPAQC 703
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ GRGV K+L+KA + + +GA + A+ D GL Y E D+K+ A LYR+
Sbjct: 310 GCLYQDGRGVEKDLEKAAEYYRRGAEQNYPPALCDLGLCYETGEGVEKDEKKGA-ELYRR 368
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+ L Q NLG L +EEAV L +A+ + RA L CL G GV+
Sbjct: 369 SGELDYAPAQCNLGFCLLNGIGVDKNEEEAVAWLKRAAEQDYPRAISILGDCLGEGTGVE 428
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A Y RAA+ GYV A LCY G G+ +QA W RAA+ G+ AQ
Sbjct: 429 KDEAASAACYQRAADLGYVPAQCALGLCYETGGGVERDEKQAVAWYTRAAEQGYAPAQCN 488
Query: 275 HGL----GLFTEGEMMKAVVYLELATR 297
+ G+ E + +AV++L+ A
Sbjct: 489 LAVCCLNGIGMEPDAAQAVIWLKKAVE 515
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 12/186 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G F+ G GV+++ +A++ + + G A G Y + K A+ Y +
Sbjct: 742 GDCFRRGVGVQQDPQRAVEHYRQAIKAGYVSAFCSLGYCYEVGEGVPEDKVKAVEYYTRG 801
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD Q NLG YL+ V L++A+ G +RA L C G GV
Sbjct: 802 AQGGDETAQCNLGYCYLEGIGAKKDPGRGVSWLHKAAKQGSLRAMCLLGGCYRDGTGVMK 861
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++ + RAAE GY A N LCY G G+ + +A +W RAA+ G AQ
Sbjct: 862 DDKKCVEYLTRAAEQGYAPAQCNLGLCYEQGTGVAVDATRAVEWYTRAAESGDRAAQCNL 921
Query: 276 GLGLFT 281
G L
Sbjct: 922 GYCLLN 927
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 18/232 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G ++ GRGV + KA + F A + A+ D GL Y +D+ E A+ Y Q+
Sbjct: 202 GCCYRDGRGVEPDQAKAAELFRLAAEKRYIPALCDLGLCYESGSGVDEDLEKAVECYTQS 261
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHR-GRGVD 214
A G Q NLG YL +A + L +++ + RA +L CL++ GRGV+
Sbjct: 262 AEEGYAPAQCNLGYCYLAAIGVEQDDAKAAEWLAKSAEQEYPRA-LRLMGCLYQDGRGVE 320
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+L++AA +Y R AE Y A+ + LCY GEG+ ++ + +R+ + + AQ
Sbjct: 321 KDLEKAAEYYRRGAEQNYPPALCDLGLCYETGEGVEKDEKKGAELYRRSGELDYAPAQCN 380
Query: 275 HGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
G G+ + +AV +L+ A A + L + + +D A
Sbjct: 381 LGFCLLNGIGVDKNEEEAVAWLKRAAEQDYPRAISILGDCLGEGTGVEKDEA 432
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + G G + + +A+ + K A +G A GL Y D + A LYR+A
Sbjct: 634 GSCLRDGMGTQPDEKEAVKWYTKAAEQGYPPAQCSLGLCYENGDGTQQDPVRAAELYRRA 693
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NL + YL +AV+ L +A+ RA L C RG GV
Sbjct: 694 ADQGYAPAQCNLAVCYLNGIGVPEDDGQAVEWLKRAAEQDFGRALNILGDCFRRGVGVQQ 753
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ Q A Y +A + GYV A + CY GEG+P +A ++ R A G AQ
Sbjct: 754 DPQRAVEHYRQAIKAGYVSAFCSLGYCYEVGEGVPEDKVKAVEYYTRGAQGGDETAQCNL 813
Query: 276 GL----GLFTEGEMMKAVVYLELATRAG 299
G G+ + + + V +L A + G
Sbjct: 814 GYCYLEGIGAKKDPGRGVSWLHKAAKQG 841
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 95/235 (40%), Gaps = 18/235 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G G GV K+ + + + A G A GL Y E D+K+A ++ Y +
Sbjct: 418 GDCLGEGTGVEKDEAASAACYQRAADLGYVPAQCALGLCYETGGGVERDEKQA-VAWYTR 476
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NL + L +AV L +A RA L C G GV+
Sbjct: 477 AAEQGYAPAQCNLAVCCLNGIGMEPDAAQAVIWLKKAVERNFARAMDILGDCYRNGTGVE 536
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ A Y +AAE GY A+ + LCY G G+ ++A + ++AA G+ AQ
Sbjct: 537 KDEVRAVELYRQAAEQGYAMAICDLGLCYEMGSGVERDEKKAVEHYRKAAQMGYPGAQCN 596
Query: 275 HGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
G G+ T +AV + LA G A + L+ T D V
Sbjct: 597 LGYCCLEGVGTVKRPEEAVKWFRLAAEQGYPRAQSLLGSCLRDGMGTQPDEKEAV 651
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+++G GV + +A + + A +G A + G+ Y E D + A+ L RQ+A
Sbjct: 133 YENGSGVDHDPVRAAELYQLSADQGYAPAQCNLGVCYLNGIGVERDD-DHAVELLRQSAE 191
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
P G LG Y Q +A +L A+ ++ A L LC G GVD +L
Sbjct: 192 QEFPRGISLLGCCYRDGRGVEPDQAKAAELFRLAAEKRYIPALCDLGLCYESGSGVDEDL 251
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
++A Y ++AE GY A N CY G+ +A +W+ ++A+
Sbjct: 252 EKAVECYTQSAEEGYAPAQCNLGYCYLAAIGVEQDDAKAAEWLAKSAE 299
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ +EE LL QA + G + AQY LA+ G GVD ++ +AA W+ +AAE +RA
Sbjct: 31 GLQRSREEFQALLDQAEL-GDLSAQYDLAMKYADGDGVDRDMAQAAHWFAQAAEQDDMRA 89
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ CY GEG+ ++A + +R D + Q GL
Sbjct: 90 VEALGRCYQLGEGVEQDEKRAVELFQRCVDEDYAPGQCSLGL 131
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G +K+ + + K A +GS AM G Y + M + + +A
Sbjct: 814 GYCYLEGIGAKKDPGRGVSWLHKAAKQGSLRAMCLLGGCYRDGTGVMKDDKKCVEYLTRA 873
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG+ Y Q AV+ +A+ +G AQ L CL G G
Sbjct: 874 AEQGYAPAQCNLGLCYEQGTGVAVDATRAVEWYTRAAESGDRAAQCNLGYCLLNGIGTAR 933
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
N A W+ RA + G VRAM + C G G +A + + AA
Sbjct: 934 NPAGAVEWFKRAVKQGSVRAMNLLADCCRDGVGTETDLARAEQLYQEAA 982
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q G+ ++ AV+L + + Q L LC G GVD + AA Y +A+ G
Sbjct: 98 QLGEGVEQDEKRAVELFQRCVDEDYAPGQCSLGLCYENGSGVDHDPVRAAELYQLSADQG 157
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
Y A N +CY G G+ A + ++++A+
Sbjct: 158 YAPAQCNLGVCYLNGIGVERDDDHAVELLRQSAE 191
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Query: 164 AVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A LGD + Q++L + Y + V QA+ +RA L C G GV+
Sbjct: 46 AELGDLSAQYDLAMKYADGDGVDRDMAQAAHWFAQAAEQDDMRAVEALGRCYQLGEGVEQ 105
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ + A + R + Y + LCY G G+ +A + + +AD G+ AQ
Sbjct: 106 DEKRAVELFQRCVDEDYAPGQCSLGLCYENGSGVDHDPVRAAELYQLSADQGYAPAQCNL 165
Query: 276 GL 277
G+
Sbjct: 166 GV 167
>gi|237746262|ref|ZP_04576742.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377613|gb|EEO27704.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 377
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 18/199 (9%)
Query: 91 WNDALRPLREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG 144
+N+AL +++ V G+ + G G+++NL++A+ + K A +G A +
Sbjct: 40 YNEALPLIKKGAVSGDAEAQFNLGRMYSKGHGIKQNLEQAMYWYKKSADQGHLKATYNLA 99
Query: 145 LMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQAS 192
MY + + E A LY ++A G PA QFNL + Y + + VK Y+A+
Sbjct: 100 YMYLQGKGVKENPEKAYKLYLESAEKGLPAAQFNLALMYFKGKGVKKDNQKAFEWFYKAA 159
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
+ G AQ+ +AL G G+ +A WY +AAE GY +AM+ L Y GEG+P +
Sbjct: 160 LQGDKEAQFNVALSYTEGNGIKQGYAKALYWYKKAAEQGYAKAMFALGLVYRQGEGVPAN 219
Query: 253 HRQARKWMKRAADCGHGKA 271
+A +W K+AA G+ A
Sbjct: 220 RDEAIRWYKKAAAQGYAPA 238
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G+GV++N +KA +L+ A +G A + LMY++ + A + +AA+
Sbjct: 102 YLQGKGVKENPEKAYKLYLESAEKGLPAAQFNLALMYFKGKGVKKDNQKAFEWFYKAALQ 161
Query: 167 GDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD QFN+ +SY + +K Y +A+ G+ +A + L L +G GV N
Sbjct: 162 GDKEAQFNVALSYTEGNGIKQGYAKALYWYKKAAEQGYAKAMFALGLVYRQGEGVPANRD 221
Query: 219 EAARWYLRAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
EA RWY +AA GY AM N SL Y G S +A KW A D G K GL
Sbjct: 222 EAIRWYKKAAAQGYAPAMANLGSLYYPEDAGDLESWDEAYKWYSMAIDHGDRK-NAPLGL 280
Query: 278 GL 279
GL
Sbjct: 281 GL 282
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 13/179 (7%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGI 177
++AL KGA G A + G MY + E A+ Y+++A G +NL
Sbjct: 41 NEALPLIKKGAVSGDAEAQFNLGRMYSKGHGIKQNLEQAMYWYKKSADQGHLKATYNLAY 100
Query: 178 SYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
YLQ E+A KL +++ G AQ+ LAL +G+GV + Q+A W+ +AA
Sbjct: 101 MYLQGKGVKENPEKAYKLYLESAEKGLPAAQFNLALMYFKGKGVKKDNQKAFEWFYKAAL 160
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 288
G A +N +L Y+ G G+ + +A W K+AA+ G+ KA GL ++ +GE + A
Sbjct: 161 QGDKEAQFNVALSYTEGNGIKQGYAKALYWYKKAAEQGYAKAMFALGL-VYRQGEGVPA 218
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ------ 181
F+ G + + ++ G +E K A+ L ++ AV GD QFNLG Y +
Sbjct: 15 FIFGILGKAIASDIEKGNQLYEQGKYNEALPLIKKGAVSGDAEAQFNLGRMYSKGHGIKQ 74
Query: 182 --EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
E+A+ +++ GH++A Y LA +G+GV N ++A + YL +AE G A +N
Sbjct: 75 NLEQAMYWYKKSADQGHLKATYNLAYMYLQGKGVKENPEKAYKLYLESAEKGLPAAQFNL 134
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLEL 294
+L Y G+G+ +++A +W +AA G +AQ L +TEG + KA+ + +
Sbjct: 135 ALMYFKGKGVKKDNQKAFEWFYKAALQGDKEAQFNVALS-YTEGNGIKQGYAKALYWYKK 193
Query: 295 ATRAGETAADHVKNVILQQLSAT--SRDRAM 323
A G A ++ +Q +RD A+
Sbjct: 194 AAEQGYAKAMFALGLVYRQGEGVPANRDEAI 224
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 77/183 (42%), Gaps = 17/183 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G G+++ KAL + K A +G AM GL+Y + + ++ AI Y++AA
Sbjct: 174 YTEGNGIKQGYAKALYWYKKAAEQGYAKAMFALGLVYRQGEGVPANRDEAIRWYKKAAAQ 233
Query: 167 GDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHR--GRG-VDF 215
G NLG Y E+A L Y +I R L L L G G
Sbjct: 234 GYAPAMANLGSLYYPEDAGDLESWDEAYKWYSMAIDHGDRKNAPLGLGLIHLFGSGRYPV 293
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA--QL 273
+ +A + AAE G Y + +G G +A + K+AA+ G A +L
Sbjct: 294 DNAKAYSLFTLAAENGRADGWYWLGVMEEYGFGRLQDEERAMELYKKAANAGVEPAINRL 353
Query: 274 EHG 276
EHG
Sbjct: 354 EHG 356
>gi|343511227|ref|ZP_08748403.1| Sel1 domain-containing protein [Vibrio scophthalmi LMG 19158]
gi|342798958|gb|EGU34550.1| Sel1 domain-containing protein [Vibrio scophthalmi LMG 19158]
Length = 443
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 119/246 (48%), Gaps = 18/246 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEMDKKE---AAISLY 160
L G+ + +GV +NL +AL+ + K A +GS A + A ++ + + E AA+ Y
Sbjct: 140 LNVGRMLEFAQGVEENLQQALEWYSKAAEQGSAEAQYNMAAMLAYGISTDEDLGAALYWY 199
Query: 161 RQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
QAA Q+++ GI + EA+K A+ GH AQ+ LA+ L+ G G
Sbjct: 200 YQAAEQNHLEAQYSVALMLELGKGIEKNKSEAIKWYLIAAQQGHAEAQFNLAMMLYFGAG 259
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
++ N +A W+LRAAE G+V A YN + Y FG G + +A W AA+ GH AQ
Sbjct: 260 IEENKPDAFTWFLRAAEQGHVEAQYNVGMMYDFGRGTEPNKTKAFIWYHHAAENGHADAQ 319
Query: 273 LE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
+ LG+ T +A + A + G AA + V+L+ +D M +
Sbjct: 320 FSLASLYELGVGTPVNKKEAYFWYVKAAKQGSVAAQYNLGVMLEAGKGIEQD--MDEAIA 377
Query: 329 WRAMPS 334
W M +
Sbjct: 378 WYTMAA 383
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G G+ +N A FL+ A +G A + G+MY E +K +A I Y AA G
Sbjct: 257 GAGIEENKPDAFTWFLRAAEQGHVEAQYNVGMMYDFGRGTEPNKTKAFI-WYHHAAENGH 315
Query: 169 PAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
QF+L G ++EA +A+ G V AQY L + L G+G++ ++ EA
Sbjct: 316 ADAQFSLASLYELGVGTPVNKKEAYFWYVKAAKQGSVAAQYNLGVMLEAGKGIEQDMDEA 375
Query: 221 ARWYLRAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
WY AAE G + Y +L +S E H A W ++AA GH KAQ
Sbjct: 376 IAWYTMAAEQGDAESQYILGTLYHSNLEDFESKHL-AMMWYQKAAKQGHEKAQ 427
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G+G+ KN +A+ +L A +G A + +M + + K A + + +AA G
Sbjct: 221 GKGIEKNKSEAIKWYLIAAQQGHAEAQFNLAMMLYFGAGIEENKPDAFTWFLRAAEQGHV 280
Query: 170 AGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+N+G+ Y + +A + A+ GH AQ+ LA G G N +EA
Sbjct: 281 EAQYNVGMMYDFGRGTEPNKTKAFIWYHHAAENGHADAQFSLASLYELGVGTPVNKKEAY 340
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
WY++AA+ G V A YN + G+G+ +A W AA+ G ++Q
Sbjct: 341 FWYVKAAKQGSVAAQYNLGVMLEAGKGIEQDMDEAIAWYTMAAEQGDAESQ 391
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F G S +E+A +L QA+ GH AQY L + G + +A RW +AAE G
Sbjct: 40 FGNGGSINKEKAFELFSQAATDGHSEAQYYLGHMYYFGETTPVDKAQATRWMEQAAEQGN 99
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEG---EMMKA 288
+RA Y+ + Y G+G+ + A W +AA+ GH KAQL G L F +G + +A
Sbjct: 100 MRAQYHLATMYYHGDGISENRSMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENLQQA 159
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ + A G A + +L +T D
Sbjct: 160 LEWYSKAAEQGSAEAQYNMAAMLAYGISTDED 191
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAA 164
++ G G N +KA + F + A G + A G MY+ +DK +A + QAA
Sbjct: 37 QYYFGNGGSINKEKAFELFSQAATDGHSEAQYYLGHMYYFGETTPVDKAQATRWM-EQAA 95
Query: 165 VLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
G+ Q++L GIS + A +A+ GH +AQ + L +GV+ N
Sbjct: 96 EQGNMRAQYHLATMYYHGDGISENRSMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEEN 155
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ---- 272
LQ+A WY +AAE G A YN + ++G A W +AA+ H +AQ
Sbjct: 156 LQQALEWYSKAAEQGSAEAQYNMAAMLAYGISTDEDLGAALYWYYQAAEQNHLEAQYSVA 215
Query: 273 --LEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
LE G G+ E +A+ + +A + G A
Sbjct: 216 LMLELGKGI--EKNKSEAIKWYLIAAQQGHAEA 246
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y LA+ + G G N ++A + +AA G+ A Y Y FGE P+ QA +WM
Sbjct: 32 YDLAVQYYFGNGGSINKEKAFELFSQAATDGHSEAQYYLGHMYYFGETTPVDKAQATRWM 91
Query: 261 KRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLELATR 297
++AA+ G+ +AQ HG G+ +E M YL+ A +
Sbjct: 92 EQAAEQGNMRAQYHLATMYYHGDGI-SENRSMAFHWYLKAAEQ 133
>gi|342217685|ref|ZP_08710324.1| Sel1 repeat protein [Megasphaera sp. UPII 135-E]
gi|341593348|gb|EGS36198.1| Sel1 repeat protein [Megasphaera sp. UPII 135-E]
Length = 1112
Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 33/229 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ +G+GV +N KA++ + K A+G+TLA + GL Y + E A++ Y++AA
Sbjct: 860 YHYGKGVVRNYTKAVEWYKKAVAQGNTLAQNNLGLCYEDGKGVAQDYEQAVAWYQKAAAQ 919
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD NLG Y E+A++L +A+ G A L C G+GV +
Sbjct: 920 GDSIALNNLGRCYEAGKGVVQNYEKAIELYKKAAEQGDATAYDNLGWCYQHGKGVIQDYA 979
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G A N +CY +G+G+ + +A +W ++AAD G+ AQ+ G+
Sbjct: 980 KAIEWYKKAAEQGDATAQNNLGICYQYGKGVAKDYAKAVEWYQKAADQGNATAQIHLGM- 1038
Query: 279 LFTEGEMM--------------------KAVVYLELATRAGETAADHVK 307
+ EG+ + A +Y++LA + E A+ V+
Sbjct: 1039 RYDEGKGVVQNYEKAIEWYKKAAIQGDPDAQIYIQLAKKRKEERAERVR 1087
Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+++G+GV +N +KA++ + K A +G A G Y E + E AI Y++A
Sbjct: 752 YEYGKGVVQNYEKAIEWYKKAAEQGDATAQSHLGGCYQEGKGVVQDYEKAIEWYKKAIAQ 811
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q NLG+ Y E+AV +A+ G AQ L +C H G+GV N
Sbjct: 812 GDATAQNNLGMCYQYGEGVVQDYEKAVGWFKKAAAQGDATAQNNLGICYHYGKGVVRNYT 871
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------ 272
+A WY +A G A N LCY G+G+ + QA W ++AA G A
Sbjct: 872 KAVEWYKKAVAQGNTLAQNNLGLCYEDGKGVAQDYEQAVAWYQKAAAQGDSIALNNLGRC 931
Query: 273 LEHGLGLFTEGEMMKAV-VYLELATRAGETAADHV 306
E G G+ E KA+ +Y + A + TA D++
Sbjct: 932 YEAGKGVVQNYE--KAIELYKKAAEQGDATAYDNL 964
Score = 84.3 bits (207), Expect = 8e-14, Method: Composition-based stats.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 23/212 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---AISLYRQAAVLG 167
++ G GV ++ KA++ + K A +G+ VDA E+ KK+ AI Y++AA G
Sbjct: 649 YEKGNGVAQDDAKAVEWYQKAATQGN----VDAQNSMDELQKKQKEQKAIEEYQKAAAQG 704
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+ Q NLG+ Y ++AV+ +A+ G+ AQ L +C G+GV N ++
Sbjct: 705 NTTAQNNLGVCYEYGKGVAQDYKKAVEWYQKAAAQGNATAQNNLGVCYEYGKGVVQNYEK 764
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------L 273
A WY +AAE G A + CY G+G+ + +A +W K+A G AQ
Sbjct: 765 AIEWYKKAAEQGDATAQSHLGGCYQEGKGVVQDYEKAIEWYKKAIAQGDATAQNNLGMCY 824
Query: 274 EHGLGLFTEGEMMKAVVYLELATRAGETAADH 305
++G G+ + E KAV + + A G+ A +
Sbjct: 825 QYGEGVVQDYE--KAVGWFKKAAAQGDATAQN 854
Score = 83.2 bits (204), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 13/207 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ G+GV ++ +KA + + K A +G A G+ Y + A+ Y++AA
Sbjct: 613 YEEGKGVVQDDEKAGEWYQKAAVKGHIAAQYQLGVCYEKGNGVAQDDAKAVEWYQKAATQ 672
Query: 167 GDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
G+ Q + L +++A++ +A+ G+ AQ L +C G+GV + ++A W
Sbjct: 673 GNVDAQNSMDELQKKQKEQKAIEEYQKAAAQGNTTAQNNLGVCYEYGKGVAQDYKKAVEW 732
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
Y +AA G A N +CY +G+G+ ++ +A +W K+AA+ G AQ G G + EG
Sbjct: 733 YQKAAAQGNATAQNNLGVCYEYGKGVVQNYEKAIEWYKKAAEQGDATAQSHLG-GCYQEG 791
Query: 284 EMM-----KAVVYLELATRAGETAADH 305
+ + KA+ + + A G+ A +
Sbjct: 792 KGVVQDYEKAIEWYKKAIAQGDATAQN 818
Score = 78.6 bits (192), Expect = 4e-12, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 40/202 (19%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-AISLYRQAAVLGDP 169
++ G+GV ++ KA++ + K A +G+ A G+ Y + + + A+ Y++AA G+
Sbjct: 477 YEKGKGVAQDYAKAVEWYQKAAIQGNVDAQYHLGVFYEVVVQDDTKAVDWYQKAATQGNV 536
Query: 170 AGQFNLGISY----------------------------------LQEE-----AVKLLYQ 190
Q+ LG Y LQ+E A++ +
Sbjct: 537 DAQYQLGWCYEYGTGIVQDDAKAVEWYQKAATQGNVDAQNSMDKLQKEQKEQKAIEEYQK 596
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G+ AQYQL +C G+GV + ++A WY +AA G++ A Y +CY G G+
Sbjct: 597 AAAQGNAEAQYQLGVCYEEGKGVVQDDEKAGEWYQKAAVKGHIAAQYQLGVCYEKGNGVA 656
Query: 251 LSHRQARKWMKRAADCGHGKAQ 272
+A +W ++AA G+ AQ
Sbjct: 657 QDDAKAVEWYQKAATQGNVDAQ 678
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
+ +A++ Q + G+ QY L +C G+GV N ++A WY +AA G V A Y
Sbjct: 415 EAKAIEWYQQVATQGNAEVQYYLGVCYRTGKGVAQNYKKAVEWYQKAATQGNVDAQYQLG 474
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE---GEMMKAVVYLELATR 297
CY G+G+ + +A +W ++AA G+ AQ + LG+F E + KAV + + A
Sbjct: 475 WCYEKGKGVAQDYAKAVEWYQKAAIQGNVDAQ--YHLGVFYEVVVQDDTKAVDWYQKAAT 532
Query: 298 AGETAADH 305
G A +
Sbjct: 533 QGNVDAQY 540
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
AI Y+Q A G+ Q+ LG+ Y ++AV+ +A+ G+V AQYQL C
Sbjct: 418 AIEWYQQVATQGNAEVQYYLGVCYRTGKGVAQNYKKAVEWYQKAATQGNVDAQYQLGWCY 477
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G+GV + +A WY +AA G V A Y+ + Y E + +A W ++AA G
Sbjct: 478 EKGKGVAQDYAKAVEWYQKAAIQGNVDAQYHLGVFY---EVVVQDDTKAVDWYQKAATQG 534
Query: 268 HGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 305
+ AQ E+G G+ + KAV + + A G A +
Sbjct: 535 NVDAQYQLGWCYEYGTGIVQDDA--KAVEWYQKAATQGNVDAQN 576
>gi|359298722|ref|ZP_09184561.1| Sel1 domain-containing protein [Haemophilus [parainfluenzae] CCUG
13788]
gi|402306033|ref|ZP_10825085.1| Sel1 repeat protein [Haemophilus sputorum HK 2154]
gi|400375448|gb|EJP28347.1| Sel1 repeat protein [Haemophilus sputorum HK 2154]
Length = 321
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 16/207 (7%)
Query: 96 RPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEM 150
+PL E A G + H +GV ++ +A + K A +G A G+MY E
Sbjct: 52 KPLAEQGYASAQFNLGVIYDHEQGVEQDYIEAAKWYRKAAEQGHRDAQFYLGVMYSRGEG 111
Query: 151 DKKE--AAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQ 200
K++ I YR+AA G QFNLG+ Y + E AVK +A+ GH AQ
Sbjct: 112 VKQDYLEEIKWYRKAAEQGHIDAQFNLGVMYSKGEGVKQDDIEAVKWYRKAAEQGHKNAQ 171
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y L + + GRGV + EAA+WY +AA+ G++ A++N + Y G G+ + + KW
Sbjct: 172 YNLGVMYYDGRGVKQDYLEAAKWYRKAADQGHINALFNLGVIYYDGRGVKQDYLETAKWY 231
Query: 261 KRAADCGHGKAQLEHGLGLFTEGEMMK 287
++AA+ GH AQ G+ ++++GE +K
Sbjct: 232 RKAAEQGHRDAQFNLGV-MYSKGEGVK 257
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 16/192 (8%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK 153
R+A L G + G GV+++ + + + K A +G A + G+MY + D
Sbjct: 96 RDAQFYL--GVMYSRGEGVKQDYLEEIKWYRKAAEQGHIDAQFNLGVMYSKGEGVKQDDI 153
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLAL 205
EA + YR+AA G Q+NLG+ Y VK Y +A+ GH+ A + L +
Sbjct: 154 EA-VKWYRKAAEQGHKNAQYNLGVMYYDGRGVKQDYLEAAKWYRKAADQGHINALFNLGV 212
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ GRGV + E A+WY +AAE G+ A +N + YS GEG+ + +A KW ++AA+
Sbjct: 213 IYYDGRGVKQDYLETAKWYRKAAEQGHRDAQFNLGVMYSKGEGVKQDYFEAAKWYRKAAE 272
Query: 266 CGHGKAQLEHGL 277
G+ AQ G+
Sbjct: 273 QGYASAQYNLGV 284
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV+++ +A+ + K A +G A + G+MY++ D EAA YR+
Sbjct: 139 GVMYSKGEGVKQDDIEAVKWYRKAAEQGHKNAQYNLGVMYYDGRGVKQDYLEAA-KWYRK 197
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G FNLG+ Y VK Y +A+ GH AQ+ L + +G GV
Sbjct: 198 AADQGHINALFNLGVIYYDGRGVKQDYLETAKWYRKAAEQGHRDAQFNLGVMYSKGEGVK 257
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
+ EAA+WY +AAE GY A YN + Y+ G G+P A++W+ +A
Sbjct: 258 QDYFEAAKWYRKAAEQGYASAQYNLGVMYANGYGVPQDKNLAKEWILKA 306
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 10/160 (6%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAG 195
GL E + A ++ A G + QFNLG+ Y E+ V+ Y +A+ G
Sbjct: 35 GLAAAEKGNHQTAFQFWKPLAEQGYASAQFNLGVIYDHEQGVEQDYIEAAKWYRKAAEQG 94
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
H AQ+ L + RG GV + E +WY +AAE G++ A +N + YS GEG+ +
Sbjct: 95 HRDAQFYLGVMYSRGEGVKQDYLEEIKWYRKAAEQGHIDAQFNLGVMYSKGEGVKQDDIE 154
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELA 295
A KW ++AA+ GH AQ G+ ++ +G +K YLE A
Sbjct: 155 AVKWYRKAAEQGHKNAQYNLGV-MYYDGRGVKQ-DYLEAA 192
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 191 ASIAGHVRAQYQLALCL-HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
A+ A V Q+Q L +G N Q A +++ AE GY A +N + Y +G+
Sbjct: 22 ATWANTVEEQFQQGLAAAEKG-----NHQTAFQFWKPLAEQGYASAQFNLGVIYDHEQGV 76
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
+ +A KW ++AA+ GH AQ G+ +++ GE +K
Sbjct: 77 EQDYIEAAKWYRKAAEQGHRDAQFYLGV-MYSRGEGVK 113
>gi|385327769|ref|YP_005882072.1| hypothetical protein NMBB_0460 [Neisseria meningitidis alpha710]
gi|416168389|ref|ZP_11607944.1| sel1 repeat protein [Neisseria meningitidis OX99.30304]
gi|421547941|ref|ZP_15993972.1| TPR repeat protein, SEL1 subfamily [Neisseria meningitidis NM2781]
gi|308388621|gb|ADO30941.1| hypothetical protein NMBB_0460 [Neisseria meningitidis alpha710]
gi|325130845|gb|EGC53578.1| sel1 repeat protein [Neisseria meningitidis OX99.30304]
gi|402327283|gb|EJU62674.1| TPR repeat protein, SEL1 subfamily [Neisseria meningitidis NM2781]
Length = 342
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 26/237 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + G+GVR++ +A+ + + A +G A V G+MY DK E A+ +
Sbjct: 84 GSMYAIGQGVRQDDAEAVKWYRQAAEQGDAQAQVLLGVMY---DKGEGVRQDDAQAMQRF 140
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRG 212
R+AA GD A Q NLG+ YL E V+ Y +A+ G AQY L + H+G G
Sbjct: 141 RKAAEQGDAAAQHNLGLMYLTGEGVRQDYAEAMQWFRKAAEQGIAEAQYNLGVMYHKGAG 200
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +A +W+ +AAE G A +N L Y GEG+ +QA +W ++AA+ G Q
Sbjct: 201 VRQDYAQAVQWFRKAAERGKAEAQHNLGLMYLTGEGVRRDSKQAAQWFRKAAE--QGIVQ 258
Query: 273 LEHGLGL-FTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
+H LG+ + +GE ++ A + A G+ A H ++ + +DRA+
Sbjct: 259 AQHNLGIRYYKGEGVRRDYKQAAQWYRRAAEQGDAVAQHNLGLMYLKGEGVRQDRAL 315
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 19/202 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKE 154
+A VLL G + G GVR++ +A+ F K A +G A + GLMY D E
Sbjct: 114 QAQVLL--GVMYDKGEGVRQDDAQAMQRFRKAAEQGDAAAQHNLGLMYLTGEGVRQDYAE 171
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALC 206
A+ +R+AA G Q+NLG+ Y + +AV+ +A+ G AQ+ L L
Sbjct: 172 -AMQWFRKAAEQGIAEAQYNLGVMYHKGAGVRQDYAQAVQWFRKAAERGKAEAQHNLGLM 230
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G GV + ++AA+W+ +AAE G V+A +N + Y GEG+ ++QA +W +RAA+
Sbjct: 231 YLTGEGVRRDSKQAAQWFRKAAEQGIVQAQHNLGIRYYKGEGVRRDYKQAAQWYRRAAEQ 290
Query: 267 GHGKAQLEHGLGL-FTEGEMMK 287
G AQ H LGL + +GE ++
Sbjct: 291 GDAVAQ--HNLGLMYLKGEGVR 310
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G GVR++ +A+ F K A +G A + G+MY + A+ +R+AA G
Sbjct: 162 GEGVRQDYAEAMQWFRKAAEQGIAEAQYNLGVMYHKGAGVRQDYAQAVQWFRKAAERGKA 221
Query: 170 AGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q NLG+ YL E V+ +A+ G V+AQ+ L + ++G GV + ++AA
Sbjct: 222 EAQHNLGLMYLTGEGVRRDSKQAAQWFRKAAEQGIVQAQHNLGIRYYKGEGVRRDYKQAA 281
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+WY RAAE G A +N L Y GEG+ A++W+ +A G+
Sbjct: 282 QWYRRAAEQGDAVAQHNLGLMYLKGEGVRQDRALAQEWLGKACQNGN 328
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 129 LKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYL--- 180
L+ A +G A + G MY++ D EA + YRQAA G Q LG Y
Sbjct: 33 LQAAEQGDAAAQYNLGAMYYKGRGVRQDDTEA-VRWYRQAAAQGFAPAQALLGSMYAIGQ 91
Query: 181 -----QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
EAVK QA+ G +AQ L + +G GV + +A + + +AAE G A
Sbjct: 92 GVRQDDAEAVKWYRQAAEQGDAQAQVLLGVMYDKGEGVRQDDAQAMQRFRKAAEQGDAAA 151
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 291
+N L Y GEG+ + +A +W ++AA+ G +AQ G+ G + +AV +
Sbjct: 152 QHNLGLMYLTGEGVRQDYAEAMQWFRKAAEQGIAEAQYNLGVMYHKGAGVRQDYAQAVQW 211
Query: 292 LELATRAGETAADH 305
A G+ A H
Sbjct: 212 FRKAAERGKAEAQH 225
>gi|386266002|ref|YP_005829494.1| Putative TPR repeat protein [Haemophilus influenzae R2846]
gi|309973238|gb|ADO96439.1| Putative TPR repeat protein [Haemophilus influenzae R2846]
Length = 348
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 119/275 (43%), Gaps = 19/275 (6%)
Query: 18 LQFPITEKDNRRPELTAS--ARKARIKRRSRFSCSRSIKSTEGHDFASLPFDVLNKIAAS 75
L P+ E+ N + +K + ++ F + + A ++ N A
Sbjct: 36 LWLPLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWYRKAAEQGVADAQLNLGNMYAKG 95
Query: 76 FTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
+ Q ++ W A G + +GRGV+++ +A+ F K A +G
Sbjct: 96 LGVKQDDVEAV---KWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYFEAVKWFRKAAEQG 152
Query: 136 STLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE-------- 182
A + G MY+ + D EA + YR+AA G QFNLG Y
Sbjct: 153 YADAQFNLGNMYYNGHGVKQDDFEA-VKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDF 211
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
EAVK +A+ GH +AQY L GRGV + EA +WY +AAE GY A N
Sbjct: 212 EAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQANLGSA 271
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
YS G G+ + +A KW K+AA+ G Q + GL
Sbjct: 272 YSAGHGVRQDYIEAVKWFKKAAENGSADGQFKLGL 306
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQ 172
R + A +L A +G+ + GLMY + D EA + YR+AA G Q
Sbjct: 27 RGDYQTAFKLWLPLAEQGNASIQFNLGLMYKKGQGIKQDDFEA-VKWYRKAAEQGVADAQ 85
Query: 173 FNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
NLG Y + EAVK QA+ G+ +AQ+ L L GRGV + EA +W+
Sbjct: 86 LNLGNMYAKGLGVKQDDVEAVKWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYFEAVKWF 145
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+AAE GY A +N Y G G+ +A KW ++AA+ G+ AQ G ++ G
Sbjct: 146 RKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLG-NMYYNGH 204
Query: 285 MMK 287
+K
Sbjct: 205 GVK 207
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 161 GNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEA-VKWYRK 219
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q+NLG Y EAVK +A+ G+ AQ L G GV
Sbjct: 220 AAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVR 279
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ EA +W+ +AAE G + L Y G+G+ A++W+ +A D G+
Sbjct: 280 QDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTLAKEWLGKACDNGN 333
>gi|392545490|ref|ZP_10292627.1| Sel1 domain-containing protein [Pseudoalteromonas rubra ATCC 29570]
Length = 555
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVL 166
+ G V +N ++A+ F K A +G A G MY + EAA+ LY+QAA
Sbjct: 34 YYFGETVEQNYERAVYWFGKAAEQGEAHAQYSLGYMYRMGQYFEQSDEAAVKLYQQAAEQ 93
Query: 167 GDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G + Q+NLG+ ++ E AVKL +A+ G+ AQY+L RG G+ N
Sbjct: 94 GHASAQYNLGVLCVRGEGITQSDTKAVKLYRKAAQQGNALAQYELGFMYARGNGIKKNDT 153
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
EA +WY A++ G RA+ N Y FG G+ S ++A K+ + AA G+ +AQL
Sbjct: 154 EAVKWYRLASDQGNTRALCNLGYMYDFGRGVKQSSKEANKYYRLAAKKGNNRAQLNLAFS 213
Query: 279 LF 280
F
Sbjct: 214 YF 215
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
++ L + + +G AQ LA + G V+ N + A W+ +AAE G A Y+ Y
Sbjct: 12 IEALIEQAQSGDAVAQNTLADAYYFGETVEQNYERAVYWFGKAAEQGEAHAQYSLGYMYR 71
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
G+ S A K ++AA+ GH AQ G+
Sbjct: 72 MGQYFEQSDEAAVKLYQQAAEQGHASAQYNLGV 104
>gi|148264042|ref|YP_001230748.1| Sel1 domain-containing protein [Geobacter uraniireducens Rf4]
gi|146397542|gb|ABQ26175.1| Sel1 domain protein repeat-containing protein [Geobacter
uraniireducens Rf4]
Length = 557
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 18/229 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDP 169
G+GV ++ +A +LK A +G++ A + GLMY++ D A + YR+AA G+
Sbjct: 160 GQGVSRDYVEAAKWYLKAAEQGNSGAQFNLGLMYYKGDGVARNFAEAFTWYRKAAEQGNA 219
Query: 170 AGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAA 221
QF+LG+ Y + + V + + A GHV AQ+ L +G EAA
Sbjct: 220 GAQFSLGLMYYKGQGVPKNFAEAAAWYRKSAEQGHVGAQFNLGYMYEMEQGAVGGNAEAA 279
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
+WY +AAE G+ A N Y GEG+P H +A KW ++AA+ G+ AQL G+ ++
Sbjct: 280 KWYRKAAEQGHAGAQSNLGYIYDIGEGVPQDHAEAAKWYRKAAEQGNAAAQLNLGI-MYD 338
Query: 282 EGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
G + +AV + A G+ A + V R+ A V
Sbjct: 339 NGHGISQDNAEAVKWYRKAAEQGDMTAQYNMGVKYANGIGVPRNNAEAV 387
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 98/182 (53%), Gaps = 14/182 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQ 162
G ++ G+GV ++ +A+ +LK A +G A ++ G+MY++ D EAA YR+
Sbjct: 82 GFMYEKGQGVLQDYAEAVKWYLKAAEQGHAGAQINVGIMYFKGQGVLPDYAEAA-KWYRK 140
Query: 163 AAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA+ G+ QFNL G+S EA K +A+ G+ AQ+ L L ++G GV
Sbjct: 141 AALQGNANAQFNLGLMCNKGQGVSRDYVEAAKWYLKAAEQGNSGAQFNLGLMYYKGDGVA 200
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N EA WY +AAE G A ++ L Y G+G+P + +A W +++A+ GH AQ
Sbjct: 201 RNFAEAFTWYRKAAEQGNAGAQFSLGLMYYKGQGVPKNFAEAAAWYRKSAEQGHVGAQFN 260
Query: 275 HG 276
G
Sbjct: 261 LG 262
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + G GV +N +A + K A +G+ A GLMY++ + K A A + YR++
Sbjct: 190 GLMYYKGDGVARNFAEAFTWYRKAAEQGNAGAQFSLGLMYYKGQGVPKNFAEAAAWYRKS 249
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G QFNLG Y E EA K +A+ GH AQ L G GV
Sbjct: 250 AEQGHVGAQFNLGYMYEMEQGAVGGNAEAAKWYRKAAEQGHAGAQSNLGYIYDIGEGVPQ 309
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EAA+WY +AAE G A N + Y G G+ + +A KW ++AA+ G AQ
Sbjct: 310 DHAEAAKWYRKAAEQGNAAAQLNLGIMYDNGHGISQDNAEAVKWYRKAAEQGDMTAQYNM 369
Query: 276 GL 277
G+
Sbjct: 370 GV 371
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 90/182 (49%), Gaps = 14/182 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G + G+GV KN +A + K A +G A + G MY EM++ A YR+
Sbjct: 226 GLMYYKGQGVPKNFAEAAAWYRKSAEQGHVGAQFNLGYMY-EMEQGAVGGNAEAAKWYRK 284
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y EA K +A+ G+ AQ L + G G+
Sbjct: 285 AAEQGHAGAQSNLGYIYDIGEGVPQDHAEAAKWYRKAAEQGNAAAQLNLGIMYDNGHGIS 344
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA +WY +AAE G + A YN + Y+ G G+P ++ +A +W ++AAD GH +Q+
Sbjct: 345 QDNAEAVKWYRKAAEQGDMTAQYNMGVKYANGIGVPRNNAEAVEWYRKAADQGHEISQVN 404
Query: 275 HG 276
G
Sbjct: 405 LG 406
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV ++ +A + K A +G+ A ++ G+MY D EA + YR+
Sbjct: 298 GYIYDIGEGVPQDHAEAAKWYRKAAEQGNAAAQLNLGIMYDNGHGISQDNAEA-VKWYRK 356
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD Q+N+G+ Y EAV+ +A+ GH +Q L GV
Sbjct: 357 AAEQGDMTAQYNMGVKYANGIGVPRNNAEAVEWYRKAADQGHEISQVNLGHLYENSDGVP 416
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ +A +WY +AAE A ++ L Y+ G+G P ++ +A KW +RAAD G+
Sbjct: 417 QDYAQALKWYGKAAEQENSDAQFSLGLMYAKGQGTPQNYAEAAKWYRRAADLGN 470
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 128 FLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ- 181
+ K A +G A + G +Y D EAA YR+AA G+ A Q NLGI Y
Sbjct: 282 YRKAAEQGHAGAQSNLGYIYDIGEGVPQDHAEAA-KWYRKAAEQGNAAAQLNLGIMYDNG 340
Query: 182 -------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
EAVK +A+ G + AQY + + G GV N EA WY +AA+ G+
Sbjct: 341 HGISQDNAEAVKWYRKAAEQGDMTAQYNMGVKYANGIGVPRNNAEAVEWYRKAADQGHEI 400
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+ N Y +G+P + QA KW +AA+ + AQ GL ++ +G+
Sbjct: 401 SQVNLGHLYENSDGVPQDYAQALKWYGKAAEQENSDAQFSLGL-MYAKGQ 449
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-A 156
A L G + +G G+ ++ +A+ + K A +G A + G+ Y + + A A
Sbjct: 327 AAAQLNLGIMYDNGHGISQDNAEAVKWYRKAAEQGDMTAQYNMGVKYANGIGVPRNNAEA 386
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLH 208
+ YR+AA G Q NLG Y + V Y ++ + +A Q+ L L
Sbjct: 387 VEWYRKAADQGHEISQVNLGHLYENSDGVPQDYAQALKWYGKAAEQENSDAQFSLGLMYA 446
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+G+G N EAA+WY RAA+ G A YN ++ Y G G+ + + + +K AD
Sbjct: 447 KGQGTPQNYAEAAKWYRRAADLGNEIAYYNLAILYYKGLGVDRDYAETVRLLKEVAD 503
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G ++ +G GV +N +A++ + K A +G ++ V+ G +Y D A+ Y +A
Sbjct: 370 GVKYANGIGVPRNNAEAVEWYRKAADQGHEISQVNLGHLYENSDGVPQDYAQALKWYGKA 429
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A + QF+LG+ Y + EA K +A+ G+ A Y LA+ ++G GVD
Sbjct: 430 AEQENSDAQFSLGLMYAKGQGTPQNYAEAAKWYRRAADLGNEIAYYNLAILYYKGLGVDR 489
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ E R A+ ++ Y G+G+ H +A KW ++A D G
Sbjct: 490 DYAETVRLLKEVADQEDANVHFSLGYMYYKGQGVIEDHAEALKWFRKAGDEG 541
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +++ GV ++ +AL + K A + ++ A GLMY + + EAA YR+
Sbjct: 406 GHLYENSDGVPQDYAQALKWYGKAAEQENSDAQFSLGLMYAKGQGTPQNYAEAA-KWYRR 464
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA LG+ +NL I Y + E V+LL + + + L ++G+GV
Sbjct: 465 AADLGNEIAYYNLAILYYKGLGVDRDYAETVRLLKEVADQEDANVHFSLGYMYYKGQGVI 524
Query: 215 FNLQEAARWYLRAAEGGYVRAM 236
+ EA +W+ +A + G AM
Sbjct: 525 EDHAEALKWFRKAGDEGLKEAM 546
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
G+V A + T Y G+G+ + +A KW +AA+ GH AQ+ G+ F
Sbjct: 73 GHVDAQFYTGFMYEKGQGVLQDYAEAVKWYLKAAEQGHAGAQINVGIMYF 122
>gi|189502556|ref|YP_001958273.1| hypothetical protein Aasi_1217 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497997|gb|ACE06544.1| hypothetical protein Aasi_1217 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1402
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 20/216 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R++ GRGV ++ KA++ + K A +G A G+MY E D K+A Y++
Sbjct: 601 GNRYRDGRGVAQDDKKAVEWYQKAAEQGQVDAQNSLGVMYDDGEGLEKDDKKA-FEWYQK 659
Query: 163 AAVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q+NLG+ Y + +A + +A+ G+ AQY L G G++
Sbjct: 660 AAEQGHVTAQYNLGVRYGNGRGVAKDERKAAEWFQKAAGQGNASAQYNLGRMYDDGEGLE 719
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY +AAE G++ A YN + Y GEG+ +AR+W ++AAD G AQ +
Sbjct: 720 KDHAKAVVWYTKAAEQGHINAQYNLGISYEDGEGVEKDDNKAREWYQKAADQGDTDAQYK 779
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAGETAADH 305
G+ ++ G + KAV + + A G +A +
Sbjct: 780 LGI-IYRNGRDVAQDDRKAVEWFQKAAEQGLASAQY 814
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 20/237 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAISLYR 161
G+ +++GRG ++ KA++ F K A +G+ A + G MY + DKK A+ Y+
Sbjct: 493 GRMYRNGRGTAQDDAKAVEWFQKAADQGNASAQYNLGRMYRDGRGVAQDDKK--AVEWYQ 550
Query: 162 QAAVLGDPAGQFNLGISY------LQEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA G+ + Q NLG Y Q++A V+ +A+ G AQ L GRGV
Sbjct: 551 KAADQGNASAQANLGWMYKNGLGVAQDDAKAVEWYQKAADQGDTIAQNNLGNRYRDGRGV 610
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ- 272
+ ++A WY +AAE G V A + + Y GEGL ++A +W ++AA+ GH AQ
Sbjct: 611 AQDDKKAVEWYQKAAEQGQVDAQNSLGVMYDDGEGLEKDDKKAFEWYQKAAEQGHVTAQY 670
Query: 273 ---LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 326
+ +G G + KA + + A G +A + + +D A VV
Sbjct: 671 NLGVRYGNGRGVAKDERKAAEWFQKAAGQGNASAQYNLGRMYDDGEGLEKDHAKAVV 727
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM------DKKEAAISLYRQAA 164
++ GRGV ++ KA++ F K A +G+ LA G MY E D+K A+ +++AA
Sbjct: 1108 YREGRGVAQDGKKAVEWFQKAAEQGNVLAQNSLGWMYREGRGVAQDDRK--AVEWHQKAA 1165
Query: 165 VLGDPAGQFNLGISY------LQEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
G + Q +LG Y +Q++A V+ +A+ G+ AQ L GRGV +
Sbjct: 1166 EQGHASAQNSLGFMYREGRGVVQDDAKAVEWYQKAADQGNASAQNSLGFMYREGRGVVQD 1225
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ---- 272
++A WY +AAE G A Y+ Y G + R+A +W ++AA+ GH AQ
Sbjct: 1226 DKKAVEWYQKAAEQGNASAQYSLGFMYREGRSVVQDDRKAVEWYQKAAEQGHASAQNSLG 1285
Query: 273 --LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 305
E+G G+ + +KAV + + A G A +
Sbjct: 1286 WMYENGRGVAQDD--IKAVEWYQKAAEQGNIDAQN 1318
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 22/214 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM------DKKEAAISLYRQAA 164
+K+G GV ++ KA++ F K A +G+ A G MY E D+K A+ Y++AA
Sbjct: 1000 YKNGWGVAQDDRKAVEWFQKAAEKGNASAQYSLGCMYREGRGIAQDDRK--AVEWYQKAA 1057
Query: 165 VLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
GD Q NLG Y +Q+ +AV+ +A+ G+V AQ L GRGV +
Sbjct: 1058 EKGDVLAQNNLGWMYENGRGVVQDGAKAVEWYQKAAEQGNVLAQNSLGCMYREGRGVAQD 1117
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
++A W+ +AAE G V A + Y G G+ R+A +W ++AA+ GH AQ G
Sbjct: 1118 GKKAVEWFQKAAEQGNVLAQNSLGWMYREGRGVAQDDRKAVEWHQKAAEQGHASAQNSLG 1177
Query: 277 LGLFTEG-----EMMKAVVYLELATRAGETAADH 305
++ EG + KAV + + A G +A +
Sbjct: 1178 F-MYREGRGVVQDDAKAVEWYQKAADQGNASAQN 1210
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G G+ K+ KA + + K A +G A + G+ Y D+++AA +++
Sbjct: 637 GVMYDDGEGLEKDDKKAFEWYQKAAEQGHVTAQYNLGVRYGNGRGVAKDERKAA-EWFQK 695
Query: 163 AAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ + Q+NLG Y E AV +A+ GH+ AQY L + G GV+
Sbjct: 696 AAGQGNASAQYNLGRMYDDGEGLEKDHAKAVVWYTKAAEQGHINAQYNLGISYEDGEGVE 755
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY +AA+ G A Y + Y G + R+A +W ++AA+ G AQ
Sbjct: 756 KDDNKAREWYQKAADQGDTDAQYKLGIIYRNGRDVAQDDRKAVEWFQKAAEQGLASAQYS 815
Query: 275 HGLGLFT 281
G +
Sbjct: 816 LGFMYYN 822
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ GRGV ++ KA++ K A +G A G MY E + A+ Y++AA
Sbjct: 1144 YREGRGVAQDDRKAVEWHQKAAEQGHASAQNSLGFMYREGRGVVQDDAKAVEWYQKAADQ 1203
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ + Q +LG Y + ++AV+ +A+ G+ AQY L GR V + +
Sbjct: 1204 GNASAQNSLGFMYREGRGVVQDDKKAVEWYQKAAEQGNASAQYSLGFMYREGRSVVQDDR 1263
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G+ A + Y G G+ +A +W ++AA+ G+ AQ G
Sbjct: 1264 KAVEWYQKAAEQGHASAQNSLGWMYENGRGVAQDDIKAVEWYQKAAEQGNIDAQNNLGFM 1323
Query: 279 LFTEGEM-------MKAVVYLELATRAGETAADH 305
+ +G KAV + E A G +A +
Sbjct: 1324 YYRDGRCRGVALVDRKAVEWFEKAAEQGNASAQY 1357
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAISLYR 161
G ++ G GV K+ +KA + + K A +G T A G++Y + D+K A+ ++
Sbjct: 745 GISYEDGEGVEKDDNKAREWYQKAADQGDTDAQYKLGIIYRNGRDVAQDDRK--AVEWFQ 802
Query: 162 QAAVLGDPAGQFNLGISY------LQEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA G + Q++LG Y +Q++A + +A+ G+ AQY L GRGV
Sbjct: 803 KAAEQGLASAQYSLGFMYYNGYGVVQDDAKAAEWFQKAAGQGNASAQYNLGRMYREGRGV 862
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ ++A WY +AAE G V A + Y G G+ R+A +W ++AA+ G+ AQ
Sbjct: 863 AQDDKKAVEWYGKAAEQGQVDAQNSLGAMYYNGHGVAQDDRKAVEWFQKAAEKGNVLAQ 921
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKE-AAISLYRQAAVL 166
+K+G GV ++ KA++ + K A +G A G MY W + + + A+ +++AA
Sbjct: 928 YKNGWGVAQDDKKAVEWYGKAAEQGQVDAQNSLGCMYKNGWGVAQDDRKAVEWFQKAAEK 987
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q +LG Y +AV+ +A+ G+ AQY L GRG+ + +
Sbjct: 988 GNVLAQNSLGCMYKNGWGVAQDDRKAVEWFQKAAEKGNASAQYSLGCMYREGRGIAQDDR 1047
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G V A N Y G G+ +A +W ++AA+ G+ AQ G
Sbjct: 1048 KAVEWYQKAAEKGDVLAQNNLGWMYENGRGVVQDGAKAVEWYQKAAEQGNVLAQNSLGC- 1106
Query: 279 LFTEG-----EMMKAVVYLELATRAGETAADH 305
++ EG + KAV + + A G A +
Sbjct: 1107 MYREGRGVAQDGKKAVEWFQKAAEQGNVLAQN 1138
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM------DKKEAAISLYRQAA 164
+ +G GV ++ KA + F K A +G+ A + G MY E DKK A+ Y +AA
Sbjct: 820 YYNGYGVVQDDAKAAEWFQKAAGQGNASAQYNLGRMYREGRGVAQDDKK--AVEWYGKAA 877
Query: 165 VLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
G Q +LG Y +AV+ +A+ G+V AQ L G GV +
Sbjct: 878 EQGQVDAQNSLGAMYYNGHGVAQDDRKAVEWFQKAAEKGNVLAQNSLGCMYKNGWGVAQD 937
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
++A WY +AAE G V A + Y G G+ R+A +W ++AA+ G+ AQ G
Sbjct: 938 DKKAVEWYGKAAEQGQVDAQNSLGCMYKNGWGVAQDDRKAVEWFQKAAEKGNVLAQNSLG 997
Query: 277 LGLFTEG-----EMMKAVVYLELATRAGETAADH 305
++ G + KAV + + A G +A +
Sbjct: 998 C-MYKNGWGVAQDDRKAVEWFQKAAEKGNASAQY 1030
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 15/177 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ GRGV ++ KA++ + K A +G+ A G MY E + A+ Y++AA
Sbjct: 1216 YREGRGVVQDDKKAVEWYQKAAEQGNASAQYSLGFMYREGRSVVQDDRKAVEWYQKAAEQ 1275
Query: 167 GDPAGQFNLGISY------LQEE--AVKLLYQASIAGHVRAQYQLALCLHRG---RGVDF 215
G + Q +LG Y Q++ AV+ +A+ G++ AQ L +R RGV
Sbjct: 1276 GHASAQNSLGWMYENGRGVAQDDIKAVEWYQKAAEQGNIDAQNNLGFMYYRDGRCRGVAL 1335
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
++A W+ +AAE G A Y+ Y G G+ + +A +W ++AA+ G AQ
Sbjct: 1336 VDRKAVEWFEKAAEQGNASAQYSLGWMYYNGYGVAQDYAKALEWFQKAAEQGQVDAQ 1392
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISY------LQEE--AVKLLYQASIAGHVRAQYQLAL 205
E A L A GD Q+N+G Y Q++ AV+ +A+ G+ AQY L
Sbjct: 471 EVAKLLIESGAGQGDAETQYNIGRMYRNGRGTAQDDAKAVEWFQKAADQGNASAQYNLGR 530
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
GRGV + ++A WY +AA+ G A N Y G G+ +A +W ++AAD
Sbjct: 531 MYRDGRGVAQDDKKAVEWYQKAADQGNASAQANLGWMYKNGLGVAQDDAKAVEWYQKAAD 590
Query: 266 CGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G AQ G G + KAV + + A G+ A + V+ +D
Sbjct: 591 QGDTIAQNNLGNRYRDGRGVAQDDKKAVEWYQKAAEQGQVDAQNSLGVMYDDGEGLEKD 649
>gi|345869667|ref|ZP_08821624.1| serine/threonine protein kinase [Thiorhodococcus drewsii AZ1]
gi|343923050|gb|EGV33747.1| serine/threonine protein kinase [Thiorhodococcus drewsii AZ1]
Length = 981
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G GRG+ + +A F K A +G A G+ ++ + A+ + +A
Sbjct: 725 GVMHSEGRGIELDQHQASHWFRKAAEQGHAAAQNSLGIAFFYGRGVIQSDHQALKWFHKA 784
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+NLG+ +++ + ++A+ GH AQY L + GRGV
Sbjct: 785 AEQGYIEAQYNLGLINTFGRGTKKDDQQSAEWFHKAASQGHTEAQYNLGIMYSEGRGVKK 844
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N +AARWY +AAE G+ A YN + YS G G+ QA W ++AA+ GH +AQ +
Sbjct: 845 NQSQAARWYRKAAEQGFANAQYNLGIMYSEGRGVNKDQSQADHWYRKAAEQGHAQAQNNY 904
Query: 276 GLGLFT-EG---EMMKAVVYLELATRAGETAA 303
G+ EG + +A ++ E A++ G A
Sbjct: 905 GVKFMVGEGVGPDYYQAFLWFEKASKQGHADA 936
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 105/189 (55%), Gaps = 15/189 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G G+ K+ +A++ + K A +GS A + G+M+ E+D+ +A+ +R+
Sbjct: 689 GVMYANGLGITKDDQQAVEWYRKAAEQGSADAQNNLGVMHSEGRGIELDQHQAS-HWFRK 747
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G A Q +LGI++ +A+K ++A+ G++ AQY L L GRG
Sbjct: 748 AAEQGHAAAQNSLGIAFFYGRGVIQSDHQALKWFHKAAEQGYIEAQYNLGLINTFGRGTK 807
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q++A W+ +AA G+ A YN + YS G G+ + QA +W ++AA+ G AQ
Sbjct: 808 KDDQQSAEWFHKAASQGHTEAQYNLGIMYSEGRGVKKNQSQAARWYRKAAEQGFANAQYN 867
Query: 275 HGLGLFTEG 283
G+ +++EG
Sbjct: 868 LGI-MYSEG 875
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
GRG +K+ ++ + F K A++G T A + G+MY E + A YR+AA G
Sbjct: 803 GRGTKKDDQQSAEWFHKAASQGHTEAQYNLGIMYSEGRGVKKNQSQAARWYRKAAEQGFA 862
Query: 170 AGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NLGI Y Q +A +A+ GH +AQ + G GV + +A
Sbjct: 863 NAQYNLGIMYSEGRGVNKDQSQADHWYRKAAEQGHAQAQNNYGVKFMVGEGVGPDYYQAF 922
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
W+ +A++ G+ A N + Y FG G+P H QA W +AA+ GH
Sbjct: 923 LWFEKASKQGHADAQNNLGMLYEFGLGVPADHHQAAYWFHQAANQGH 969
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM--YWEMDKKEAAISL--YRQA 163
G F +GRGV ++ +AL F K A +G A + GL+ + KK+ S + +A
Sbjct: 761 GIAFFYGRGVIQSDHQALKWFHKAAEQGYIEAQYNLGLINTFGRGTKKDDQQSAEWFHKA 820
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+NLGI Y Q +A + +A+ G AQY L + GRGV+
Sbjct: 821 ASQGHTEAQYNLGIMYSEGRGVKKNQSQAARWYRKAAEQGFANAQYNLGIMYSEGRGVNK 880
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A WY +AAE G+ +A N + + GEG+ + QA W ++A+ GH AQ
Sbjct: 881 DQSQADHWYRKAAEQGHAQAQNNYGVKFMVGEGVGPDYYQAFLWFEKASKQGHADAQNNL 940
Query: 276 GL----GLFTEGEMMKAVVYLELATRAGETAA 303
G+ GL + +A + A G A
Sbjct: 941 GMLYEFGLGVPADHHQAAYWFHQAANQGHKGA 972
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGIS 178
KAL F K A G +A + G+MY A+ YR+AA G+ Q NLG+
Sbjct: 632 KALRLFNKAAINGHAMAQYNLGVMYANGLGTTKDDRQAVEWYRKAAEQGNADAQNNLGVM 691
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y ++AV+ +A+ G AQ L + GRG++ + +A+ W+ +AAE
Sbjct: 692 YANGLGITKDDQQAVEWYRKAAEQGSADAQNNLGVMHSEGRGIELDQHQASHWFRKAAEQ 751
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMM 286
G+ A + + + +G G+ S QA KW +AA+ G+ +AQ GL G T+ +
Sbjct: 752 GHAAAQNSLGIAFFYGRGVIQSDHQALKWFHKAAEQGYIEAQYNLGLINTFGRGTKKDDQ 811
Query: 287 KAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
++ + A G T A + ++ + ++++
Sbjct: 812 QSAEWFHKAASQGHTEAQYNLGIMYSEGRGVKKNQS 847
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 144 GLMYWEMDKKE---AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQAS 192
G +Y E + + A+ L+ +AA+ G Q+NLG+ Y +AV+ +A+
Sbjct: 618 GFIYLETNTDQDNRKALRLFNKAAINGHAMAQYNLGVMYANGLGTTKDDRQAVEWYRKAA 677
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
G+ AQ L + G G+ + Q+A WY +AAE G A N + +S G G+ L
Sbjct: 678 EQGNADAQNNLGVMYANGLGITKDDQQAVEWYRKAAEQGSADAQNNLGVMHSEGRGIELD 737
Query: 253 HRQARKWMKRAADCGHGKAQLEHGLGLF 280
QA W ++AA+ GH AQ G+ F
Sbjct: 738 QHQASHWFRKAAEQGHAAAQNSLGIAFF 765
>gi|163794175|ref|ZP_02188147.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
gi|159180343|gb|EDP64864.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
Length = 380
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 122/255 (47%), Gaps = 24/255 (9%)
Query: 87 VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V + + +AL+ R+A G +K G GV ++ +AL + K A +G A
Sbjct: 107 VTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQ 166
Query: 141 VDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLL 188
+ GLMY D A+ YR+AA G QFN+G+ Y + EA+K
Sbjct: 167 FNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWY 226
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
+A+ GH +QY L G GV + EA +WY +AAE G+ + +N Y GEG
Sbjct: 227 RKAAEQGHASSQYNLGEMYVNGDGVTQDYAEAVKWYRKAAEQGHAGSQFNIGYMYKRGEG 286
Query: 249 LPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 303
+ + +A KW ++AA+ GH AQ GL ++ G + + A ++ +A G AA
Sbjct: 287 VTQDYAEAVKWYRKAAEQGHAGAQNNLGL-MYYNGKGVLQDTIAAHMWFNIAVVNGSKAA 345
Query: 304 DHVKNVILQQLSATS 318
+++ +LS++
Sbjct: 346 VKNRDIAAGKLSSSD 360
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Query: 96 RPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD- 151
+PL E A G +K G GV ++ +AL + K A +G A + GLMY D
Sbjct: 47 KPLAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDG 106
Query: 152 ---KKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
A+ YR+AA G QFN+G+ Y + EA+K +A+ G AQ
Sbjct: 107 VTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQ 166
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ + L RG GV + EA +WY +AAE G A +N L Y G+G+ + +A KW
Sbjct: 167 FNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWY 226
Query: 261 KRAADCGHGKAQLEHG 276
++AA+ GH +Q G
Sbjct: 227 RKAAEQGHASSQYNLG 242
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 107 WGKRFKHGRGVRKNLD--KALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLY 160
W + F G ++ D AL + A +G A + GLMY D A+ Y
Sbjct: 23 WAQDFNKGLKAAQSGDFATALKEWKPLAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWY 82
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA G QFN+G+ Y + EA+K +A+ G AQ+ + L RG G
Sbjct: 83 RKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDG 142
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + EA +WY +AAE G A +N L Y G+G+ + +A KW ++AA+ G AQ
Sbjct: 143 VTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQ 202
Query: 273 LEHGLGLFTEGE 284
GL ++ G+
Sbjct: 203 FNIGL-MYKRGD 213
>gi|340363634|ref|ZP_08685957.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|339885313|gb|EGQ75042.1| TPR repeat protein [Neisseria macacae ATCC 33926]
Length = 420
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G R++ G+GVR+N ++A+ + K A +G A G+MY E A+ YR+A
Sbjct: 161 GLRYEQGQGVRQNDEEAVRWYRKAAEQGLATAQYHLGVMYANGRGVRQNDEEAVRWYRKA 220
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q++LG+ Y EEA + +A+ G V AQ L G+GV
Sbjct: 221 AEQGLATAQYHLGVMYANRRGVRQNYEEAAQWYRKAAEQGDVDAQNNLGALYDEGQGVRQ 280
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA RWY +AAE GYV A N + YS G+G+ + +A +W ++AA+ HG A +H
Sbjct: 281 DSAEAVRWYRKAAERGYVVAQNNLGVAYSEGQGVRQDYPEALRWYRKAAE--HGFAAAQH 338
Query: 276 GLG-LFTEG 283
LG ++ EG
Sbjct: 339 NLGEMYYEG 347
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQF 173
G+GV ++ ++A++ A +G A + G+MY + A ++AA G Q+
Sbjct: 99 GQGVNQDHEQAMEWCRSAADKGYLPAQNNLGMMYGVLQNYVEATKWLQKAAEQGSVNAQY 158
Query: 174 NLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
NLG+ Y Q EEAV+ +A+ G AQY L + GRGV N +EA RWY
Sbjct: 159 NLGLRYEQGQGVRQNDEEAVRWYRKAAEQGLATAQYHLGVMYANGRGVRQNDEEAVRWYR 218
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 285
+AAE G A Y+ + Y+ G+ ++ +A +W ++AA+ G AQ G L+ EG+
Sbjct: 219 KAAEQGLATAQYHLGVMYANRRGVRQNYEEAAQWYRKAAEQGDVDAQNNLG-ALYDEGQG 277
Query: 286 MK 287
++
Sbjct: 278 VR 279
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + + RGVR+N ++A + K A +G A + G +Y E D EA + YR+
Sbjct: 233 GVMYANRRGVRQNYEEAAQWYRKAAEQGDVDAQNNLGALYDEGQGVRQDSAEA-VRWYRK 291
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG++Y + + V+ Y +A+ G AQ+ L + G+GV
Sbjct: 292 AAERGYVVAQNNLGVAYSEGQGVRQDYPEALRWYRKAAEHGFAAAQHNLGEMYYEGKGVH 351
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N EA +WYL+AAE G+ A Y G+G+P + + A++W K+A D G
Sbjct: 352 QNYPEALQWYLKAAEQGFSPAQNRLGEMYEEGQGVPKNRKVAKEWHKKACDNG 404
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + +GRGVR+N ++A+ + K A +G A G+MY E A YR+A
Sbjct: 197 GVMYANGRGVRQNDEEAVRWYRKAAEQGLATAQYHLGVMYANRRGVRQNYEEAAQWYRKA 256
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD Q NLG Y + EAV+ +A+ G+V AQ L + G+GV
Sbjct: 257 AEQGDVDAQNNLGALYDEGQGVRQDSAEAVRWYRKAAERGYVVAQNNLGVAYSEGQGVRQ 316
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA RWY +AAE G+ A +N Y G+G+ ++ +A +W +AA+ G AQ
Sbjct: 317 DYPEALRWYRKAAEHGFAAAQHNLGEMYYEGKGVHQNYPEALQWYLKAAEQGFSPAQNRL 376
Query: 276 GLGLFTEGE 284
G ++ EG+
Sbjct: 377 GE-MYEEGQ 384
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
E+ V + G + G GVR++ +A+ + K A +G A + +MY+ E
Sbjct: 49 ESDVQVILGSMYLRGIGVRQSDQEAVRWYRKAAEQGQAEAQYNLCMMYYVGQGVNQDHEQ 108
Query: 156 AISLYRQAAVLGDPAGQFNLGISY--LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGR 211
A+ R AA G Q NLG+ Y LQ EA K L +A+ G V AQY L L +G+
Sbjct: 109 AMEWCRSAADKGYLPAQNNLGMMYGVLQNYVEATKWLQKAAEQGSVNAQYNLGLRYEQGQ 168
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV N +EA RWY +AAE G A Y+ + Y+ G G+ + +A +W ++AA+ G A
Sbjct: 169 GVRQNDEEAVRWYRKAAEQGLATAQYHLGVMYANGRGVRQNDEEAVRWYRKAAEQGLATA 228
Query: 272 QLEHGL 277
Q G+
Sbjct: 229 QYHLGV 234
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 59/121 (48%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+K + Q + AG Q L RG GV + QEA RWY +AAE G A YN + Y
Sbjct: 38 LKKIVQRAEAGESDVQVILGSMYLRGIGVRQSDQEAVRWYRKAAEQGQAEAQYNLCMMYY 97
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 304
G+G+ H QA +W + AAD G+ AQ G+ ++A +L+ A G A
Sbjct: 98 VGQGVNQDHEQAMEWCRSAADKGYLPAQNNLGMMYGVLQNYVEATKWLQKAAEQGSVNAQ 157
Query: 305 H 305
+
Sbjct: 158 Y 158
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GVR++ +A+ + K A RG +A + G+ Y E D EA + YR+
Sbjct: 269 GALYDEGQGVRQDSAEAVRWYRKAAERGYVVAQNNLGVAYSEGQGVRQDYPEA-LRWYRK 327
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G A Q NLG Y + EA++ +A+ G AQ +L G+GV
Sbjct: 328 AAEHGFAAAQHNLGEMYYEGKGVHQNYPEALQWYLKAAEQGFSPAQNRLGEMYEEGQGVP 387
Query: 215 FNLQEAARWYLRAAEGGY 232
N + A W+ +A + G+
Sbjct: 388 KNRKVAKEWHKKACDNGF 405
>gi|197283922|ref|YP_002149794.1| hypothetical protein PMI0007 [Proteus mirabilis HI4320]
gi|227358210|ref|ZP_03842551.1| Sel1 domain protein [Proteus mirabilis ATCC 29906]
gi|425069375|ref|ZP_18472490.1| hypothetical protein HMPREF1311_02560 [Proteus mirabilis WGLW6]
gi|425073747|ref|ZP_18476853.1| hypothetical protein HMPREF1310_03204 [Proteus mirabilis WGLW4]
gi|194681409|emb|CAR40247.1| putative exported protein [Proteus mirabilis HI4320]
gi|227161546|gb|EEI46583.1| Sel1 domain protein [Proteus mirabilis ATCC 29906]
gi|404595018|gb|EKA95573.1| hypothetical protein HMPREF1310_03204 [Proteus mirabilis WGLW4]
gi|404597314|gb|EKA97813.1| hypothetical protein HMPREF1311_02560 [Proteus mirabilis WGLW6]
Length = 327
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G +++ G GV +N KAL+ + K A +G A ++ LMY +M+ E A+ Y +
Sbjct: 48 GVKYEGGEGVEQNTQKALEWYTKAAEQGHAEAQLNLALMY-DMNDDIERDAEKAVYWYNK 106
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AAV G Q+NL +S+ + E+AV +A G AQY LA+ G G++
Sbjct: 107 AAVQGLSLAQYNLAVSFDEGDGVEQDHEKAVYWYTKAGEQGDSDAQYNLAISYDEGIGIE 166
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AAE G+ A YN ++ Y GEG+ +A W +AA+ G+ AQ
Sbjct: 167 QDHEKAVTWYTKAAEQGHADAQYNLAVSYDEGEGVERDGSKAVFWYTKAANQGNRDAQNN 226
Query: 275 HGLGLFTEGE 284
G+ ++ EG+
Sbjct: 227 LGV-MYDEGD 235
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 12/187 (6%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQ 202
DK ++ ++A G+ A Q+ LG+ Y E V+ Q A+ GH AQ
Sbjct: 23 DKTAFSLPAIEKSAEEGNAASQYQLGVKYEGGEGVEQNTQKALEWYTKAAEQGHAEAQLN 82
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
LAL ++ + ++A WY +AA G A YN ++ + G+G+ H +A W +
Sbjct: 83 LALMYDMNDDIERDAEKAVYWYNKAAVQGLSLAQYNLAVSFDEGDGVEQDHEKAVYWYTK 142
Query: 263 AADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATS 318
A + G AQ + + G+ E + KAV + A G A + V +
Sbjct: 143 AGEQGDSDAQYNLAISYDEGIGIEQDHEKAVTWYTKAAEQGHADAQYNLAVSYDEGEGVE 202
Query: 319 RDRAMLV 325
RD + V
Sbjct: 203 RDGSKAV 209
>gi|325267697|ref|ZP_08134348.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
gi|324980821|gb|EGC16482.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
Length = 702
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 91 WNDALRPLREAMVLLRWGKR---------FKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
W D + R+ + L G + +G+GVR++ +A+ + + A +G A
Sbjct: 22 WADDVSDFRQTLQLAEQGDAEAQFNLGLMYYNGQGVRQDYAEAVKWYRQAAEQGDASAQN 81
Query: 142 DAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLL 188
+ GLMY D EA + YRQAA GD Q NLG+ Y + EAVK
Sbjct: 82 NLGLMYDNGYGVRQDYAEA-VKWYRQAAEQGDAEAQSNLGVMYDKGYGVRQNYAEAVKWY 140
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
QA+ G +AQY L + GRGV + EA +WY +AAE G A N Y G+G
Sbjct: 141 RQAAEQGFAQAQYNLGVMYETGRGVRQDYAEAVKWYRQAAEQGDAEAQNNLGAMYDSGQG 200
Query: 249 LPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ ++ +A +W ++AA+ GH +AQ G
Sbjct: 201 VRQNYAEALRWYRQAAEQGHAEAQFNLG 228
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+++GRGVR++ +AL + K A +G T A + G MY D EA + YRQAA
Sbjct: 267 YENGRGVRQDYAEALRWYRKAAEQGHTEAQNNLGAMYGNGHGVHQDDAEA-VKWYRQAAE 325
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
G+ Q NLG Y + V+ Y +A+ GH AQ+ L GRGV +
Sbjct: 326 QGNAEAQNNLGAMYDSGDGVRQDYAEALRWYRKAAEQGHAAAQFNLGAMYDSGRGVRQDY 385
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
EA RWY +AAE G+ A +N Y G+G+ + +A +W +AA+ G+ +AQ G+
Sbjct: 386 AEAFRWYRQAAEQGHAEAQFNLGAMYDNGDGVRQDYAEAFRWFHKAAEQGYAEAQNNLGV 445
Query: 278 GLFT 281
+
Sbjct: 446 MYYN 449
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G GVR+N +A+ + + A +G A + G+MY D EA + YRQ
Sbjct: 120 GVMYDKGYGVRQNYAEAVKWYRQAAEQGFAQAQYNLGVMYETGRGVRQDYAEA-VKWYRQ 178
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA GD Q NLG Y + V+ Y QA+ GH AQ+ L + G+ V
Sbjct: 179 AAEQGDAEAQNNLGAMYDSGQGVRQNYAEALRWYRQAAEQGHAEAQFNLGSMYYNGQDVQ 238
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ EA +WY +AA+ G A N L Y G G+ + +A +W ++AA+ GH +AQ
Sbjct: 239 QDYAEAVKWYRQAADQGNAEAQNNLGLLYENGRGVRQDYAEALRWYRKAAEQGHTEAQ 296
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 14/187 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GVR++ +AL + K A +G A + G MY D EA YRQ
Sbjct: 336 GAMYDSGDGVRQDYAEALRWYRKAAEQGHAAAQFNLGAMYDSGRGVRQDYAEA-FRWYRQ 394
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G QFNLG Y EA + ++A+ G+ AQ L + + G GV
Sbjct: 395 AAEQGHAEAQFNLGAMYDNGDGVRQDYAEAFRWFHKAAEQGYAEAQNNLGVMYYNGYGVR 454
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ E+ RW+ +AAE G A YN Y G+G+ + +A +W ++AA+ + +AQ +
Sbjct: 455 QDYAESFRWFRKAAEQGVAVAQYNLGAMYDNGDGVRQDYAEALRWYRQAAEQEYAEAQND 514
Query: 275 HGLGLFT 281
G+ +
Sbjct: 515 LGVMYYN 521
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 87 VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V +++ +ALR R+A G + +G+ V+++ +A+ + + A +G+ A
Sbjct: 201 VRQNYAEALRWYRQAAEQGHAEAQFNLGSMYYNGQDVQQDYAEAVKWYRQAADQGNAEAQ 260
Query: 141 VDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKL 187
+ GL+Y D EA + YR+AA G Q NLG Y EAVK
Sbjct: 261 NNLGLLYENGRGVRQDYAEA-LRWYRKAAEQGHTEAQNNLGAMYGNGHGVHQDDAEAVKW 319
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
QA+ G+ AQ L G GV + EA RWY +AAE G+ A +N Y G
Sbjct: 320 YRQAAEQGNAEAQNNLGAMYDSGDGVRQDYAEALRWYRKAAEQGHAAAQFNLGAMYDSGR 379
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
G+ + +A +W ++AA+ GH +AQ G ++ G+ ++
Sbjct: 380 GVRQDYAEAFRWYRQAAEQGHAEAQFNLGA-MYDNGDGVR 418
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 18/233 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQA 163
G + +G GVR++ ++ F K A +G +A + G MY D +++ A +L YRQA
Sbjct: 444 GVMYYNGYGVRQDYAESFRWFRKAAEQGVAVAQYNLGAMYDNGDGVRQDYAEALRWYRQA 503
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A Q +LG+ Y V+ Y +A+ G+V AQ L + G GV
Sbjct: 504 AEQEYAEAQNDLGVMYYNGSGVRQDYAEALRWYRKAAEQGNVEAQNNLGVMYDNGHGVRQ 563
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA RW+ +AAE GY A YN Y++G G+ +A KW ++AA+ +AQ
Sbjct: 564 DYAEALRWFRKAAEQGYAEAQYNLGAMYAYGRGVRQDDTEAVKWFRQAAEKRFPQAQYNL 623
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
G+ ++ G + +AV + A G T A + ++ +DR +
Sbjct: 624 GV-MYAYGRGVRQDDTEAVKWFRQAAAQGLTQAQYNLGIMYYSGRGVRQDRTL 675
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQA 163
G + +G GV ++ +A+ + + A +G+ A + G MY D +++ A +L YR+A
Sbjct: 300 GAMYGNGHGVHQDDAEAVKWYRQAAEQGNAEAQNNLGAMYDSGDGVRQDYAEALRWYRKA 359
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G A QFNLG Y V+ Y QA+ GH AQ+ L G GV
Sbjct: 360 AEQGHAAAQFNLGAMYDSGRGVRQDYAEAFRWYRQAAEQGHAEAQFNLGAMYDNGDGVRQ 419
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA RW+ +AAE GY A N + Y G G+ + ++ +W ++AA+ G AQ
Sbjct: 420 DYAEAFRWFHKAAEQGYAEAQNNLGVMYYNGYGVRQDYAESFRWFRKAAEQGVAVAQYNL 479
Query: 276 GLGLFTEGEMMK 287
G ++ G+ ++
Sbjct: 480 GA-MYDNGDGVR 490
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GVR++ +AL + K A +G+ A + G+MY D EA + +R+
Sbjct: 516 GVMYYNGSGVRQDYAEALRWYRKAAEQGNVEAQNNLGVMYDNGHGVRQDYAEA-LRWFRK 574
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q+NLG Y EAVK QA+ +AQY L + GRGV
Sbjct: 575 AAEQGYAEAQYNLGAMYAYGRGVRQDDTEAVKWFRQAAEKRFPQAQYNLGVMYAYGRGVR 634
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
+ EA +W+ +AA G +A YN + Y G G+ A++W +A G+ K
Sbjct: 635 QDDTEAVKWFRQAAAQGLTQAQYNLGIMYYSGRGVRQDRTLAQEWFGKACQNGYQK 690
>gi|397664659|ref|YP_006506197.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395128070|emb|CCD06275.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
Length = 375
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 117/220 (53%), Gaps = 19/220 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 130 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 188
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA LG+ + Q+NLG+ Y Q + V YQ A+ GH ++Q +L G+
Sbjct: 189 AADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLGK 248
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 249 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 308
Query: 275 HGL----GLFTEGEMMKAVVYLELATRAG-ETAADHVKNV 309
G+ G+ + +KA + A G E AA +V ++
Sbjct: 309 LGIYYRDGIGVAADPVKAYAWFTAAKNNGFEKAASNVSDL 348
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 76/200 (38%), Gaps = 37/200 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---AISLYRQAA 164
GK + + +GV N +K L A +G+ A V YW ++ E A Y++AA
Sbjct: 59 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGYYWYLNTPEGYKKAFEWYQKAA 118
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+ GQ+ LG Y G GV N A WY
Sbjct: 119 DQNNADGQYGLGYMY----------------------------DTGTGVPQNSDTAMVWY 150
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 283
+AAE G A Y G G+ QA W +AAD G+ AQ GL ++ +G
Sbjct: 151 KKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGD 209
Query: 284 ----EMMKAVVYLELATRAG 299
+ KA Y E A G
Sbjct: 210 GVPKDYQKAAEYFEKAANQG 229
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 39/178 (21%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN------------------------- 216
E+A LL + G +AQY L + +GV +N
Sbjct: 37 EKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAG 96
Query: 217 ----------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++A WY +AA+ Y Y G G+P + A W K+AA+
Sbjct: 97 YYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQ 156
Query: 267 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ A L G G + + +A+ + A G +A + ++ +Q +D
Sbjct: 157 GNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKD 214
>gi|340363638|ref|ZP_08685961.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|419798040|ref|ZP_14323483.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|339885317|gb|EGQ75046.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|385696381|gb|EIG26870.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 271
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 93/175 (53%), Gaps = 18/175 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + +G+GVR++ +A+ F K A +G A + G+MY DK E A+ Y
Sbjct: 84 GVAYINGQGVRQDDAQAVQWFGKAAEQGYAKAQYNLGVMY---DKGEGVRQDHAQAVQWY 140
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA GD Q+NLG+ Y +AV+ +A+ GH +AQY L G+G
Sbjct: 141 RKAAEQGDAPAQYNLGVMYANGQGVRQDDAQAVQWYRKAAGQGHAKAQYNLGGMYANGKG 200
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
V NL +A +WY +AAE G A YN + Y G+G+ +++ A++W +A D G
Sbjct: 201 VLQNLVQAEQWYRKAAEQGIAEAQYNLGVMYDNGQGVRQNYKIAKEWFGKACDNG 255
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 19/171 (11%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQAAVLGDPAGQFNLGISYLQ 181
L+ A +G A + G+MY D + A+ YR+AA G Q+NLG++Y+
Sbjct: 33 LQAAEQGFAAAQYNLGVMY---DNGQGVRQDDAQAVQWYRKAAEQGHAKAQYNLGVAYIN 89
Query: 182 --------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+AV+ +A+ G+ +AQY L + +G GV + +A +WY +AAE G
Sbjct: 90 GQGVRQDDAQAVQWFGKAAEQGYAKAQYNLGVMYDKGEGVRQDHAQAVQWYRKAAEQGDA 149
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
A YN + Y+ G+G+ QA +W ++AA GH KAQ G G++ G+
Sbjct: 150 PAQYNLGVMYANGQGVRQDDAQAVQWYRKAAGQGHAKAQYNLG-GMYANGK 199
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
QAA G A Q+NLG+ Y +AV+ +A+ GH +AQY L + G+GV
Sbjct: 34 QAAEQGFAAAQYNLGVMYDNGQGVRQDDAQAVQWYRKAAEQGHAKAQYNLGVAYINGQGV 93
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +A +W+ +AAE GY +A YN + Y GEG+ H QA +W ++AA+ G AQ
Sbjct: 94 RQDDAQAVQWFGKAAEQGYAKAQYNLGVMYDKGEGVRQDHAQAVQWYRKAAEQGDAPAQY 153
Query: 274 EHGLGLFTEGEMMK 287
G+ ++ G+ ++
Sbjct: 154 NLGV-MYANGQGVR 166
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 15/193 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+GVR++ +A+ + K A +G A + G+ Y D +A + + +
Sbjct: 48 GVMYDNGQGVRQDDAQAVQWYRKAAEQGHAKAQYNLGVAYINGQGVRQDDAQA-VQWFGK 106
Query: 163 AAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q+NLG+ Y + E AV+ +A+ G AQY L + G+GV
Sbjct: 107 AAEQGYAKAQYNLGVMYDKGEGVRQDHAQAVQWYRKAAEQGDAPAQYNLGVMYANGQGVR 166
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A +WY +AA G+ +A YN Y+ G+G+ + QA +W ++AA+ G +AQ
Sbjct: 167 QDDAQAVQWYRKAAGQGHAKAQYNLGGMYANGKGVLQNLVQAEQWYRKAAEQGIAEAQYN 226
Query: 275 HGLGLFTEGEMMK 287
G+ ++ G+ ++
Sbjct: 227 LGV-MYDNGQGVR 238
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
QA+ G AQY L + G+GV + +A +WY +AAE G+ +A YN + Y G+G+
Sbjct: 34 QAAEQGFAAAQYNLGVMYDNGQGVRQDDAQAVQWYRKAAEQGHAKAQYNLGVAYINGQGV 93
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAAD 304
QA +W +AA+ G+ KAQ G+ ++ +GE ++ AV + A G+ A
Sbjct: 94 RQDDAQAVQWFGKAAEQGYAKAQYNLGV-MYDKGEGVRQDHAQAVQWYRKAAEQGDAPAQ 152
Query: 305 HVKNVILQQLSATSRDRAMLV 325
+ V+ +D A V
Sbjct: 153 YNLGVMYANGQGVRQDDAQAV 173
>gi|319639040|ref|ZP_07993798.1| Sel1 domain-containing protein repeat-containing protein [Neisseria
mucosa C102]
gi|317399944|gb|EFV80607.1| Sel1 domain-containing protein repeat-containing protein [Neisseria
mucosa C102]
Length = 299
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GVR++ +A+ + K A +G T A + GLMY D E A+ +R+
Sbjct: 41 GVMYADGQGVRQDYAEAVKWYRKAAKQGDTRAQSNLGLMYVNGKGVRQDYAE-AVRWFRK 99
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD A Q NLG+ Y+ EA K ++A+ G AQ L + G+G+
Sbjct: 100 AAEQGDAAAQSNLGVMYVNGQGVHQDYAEAAKWFHKAAEQGSAEAQLNLGVMYANGQGMI 159
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EAA+WY +AAE G +A YN + Y+ G+G+ + +A KW ++A G KAQ
Sbjct: 160 QDYVEAAKWYRKAAEQGDAQAQYNLGVMYTDGQGVRQDYVEAVKWYRKATKQGDVKAQYN 219
Query: 275 HGLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
G+ ++ G+ ++AV ++E A G A + NV + + + V +W
Sbjct: 220 LGV-MYANGQGVRQNYVQAVKWIEKAAMQGHVKAQY--NVGAMYANGQGVRQNLRVAKAW 276
Query: 330 RAMP 333
M
Sbjct: 277 LGMA 280
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 14/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+GV ++ +A F K A +GS A ++ G+MY D EAA YR+
Sbjct: 113 GVMYVNGQGVHQDYAEAAKWFHKAAEQGSAEAQLNLGVMYANGQGMIQDYVEAA-KWYRK 171
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD Q+NLG+ Y EAVK +A+ G V+AQY L + G+GV
Sbjct: 172 AAEQGDAQAQYNLGVMYTDGQGVRQDYVEAVKWYRKATKQGDVKAQYNLGVMYANGQGVR 231
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
N +A +W +AA G+V+A YN Y+ G+G+ + R A+ W+ A + G+
Sbjct: 232 QNYVQAVKWIEKAAMQGHVKAQYNVGAMYANGQGVRQNLRVAKAWLGMACNNGN 285
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
PA Q+ LG+ Y EAVK +A+ G RAQ L L G+GV + EA
Sbjct: 35 PA-QYILGVMYADGQGVRQDYAEAVKWYRKAAKQGDTRAQSNLGLMYVNGKGVRQDYAEA 93
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
RW+ +AAE G A N + Y G+G+ + +A KW +AA+ G +AQL G+ ++
Sbjct: 94 VRWFRKAAEQGDAAAQSNLGVMYVNGQGVHQDYAEAAKWFHKAAEQGSAEAQLNLGV-MY 152
Query: 281 TEGEMM 286
G+ M
Sbjct: 153 ANGQGM 158
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISL 159
L G + +G+G+ ++ +A + K A +G A + G+MY + D E A+
Sbjct: 146 LNLGVMYANGQGMIQDYVEAAKWYRKAAEQGDAQAQYNLGVMYTDGQGVRQDYVE-AVKW 204
Query: 160 YRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGR 211
YR+A GD Q+NLG+ Y +AVK + +A++ GHV+AQY + G+
Sbjct: 205 YRKATKQGDVKAQYNLGVMYANGQGVRQNYVQAVKWIEKAAMQGHVKAQYNVGAMYANGQ 264
Query: 212 GVDFNLQEAARW 223
GV NL+ A W
Sbjct: 265 GVRQNLRVAKAW 276
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 173 FNLGISYLQEEA---VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
F +G + EE K+L+ A G+V AQY L + G+GV + EA +WY +AA+
Sbjct: 8 FGIGQTVYAEEVPDVQKILWVAE-QGYVPAQYILGVMYADGQGVRQDYAEAVKWYRKAAK 66
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
G RA N L Y G+G+ + +A +W ++AA+ G AQ G+ ++ G+
Sbjct: 67 QGDTRAQSNLGLMYVNGKGVRQDYAEAVRWFRKAAEQGDAAAQSNLGV-MYVNGQ 120
>gi|422341261|ref|ZP_16422202.1| hypothetical protein HMPREF9353_00865 [Treponema denticola F0402]
gi|325474832|gb|EGC78018.1| hypothetical protein HMPREF9353_00865 [Treponema denticola F0402]
Length = 784
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G GV KN +A+ + K A +G A + G +Y + ++ A ++Y AA G
Sbjct: 193 GYMYENGEGVEKNTSEAIKWYTKAADQGVANAQNNLGWIYEDREEYNRAAAMYLMAAQQG 252
Query: 168 DPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+GQ NLG Y V Y+ A+ G+V AQ L + G GVD N ++
Sbjct: 253 HASGQNNLGRMYYNGYGVDKDYKQAFEWYTKAAEQGNVYAQSNLGGMYYDGYGVDKNYEK 312
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL-- 277
A WY +AAE G V A Y+ Y+ G+G ++A +W +AA+ GH AQ G
Sbjct: 313 AFEWYTKAAEQGNVYAQYSLGFMYNNGQGTKKDEKKAVEWYTKAAEQGHSSAQYFLGFMY 372
Query: 278 --GLFTEGEMMKAVVYLELATRAGETAADH 305
G T+ + KAV + A G ++A +
Sbjct: 373 DNGQGTKKDEKKAVEWYTKAAEQGHSSAQN 402
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G+ + +G GV K+ +A + + K A +G+ A + G MY++ +DK E A Y +A
Sbjct: 261 GRMYYNGYGVDKDYKQAFEWYTKAAEQGNVYAQSNLGGMYYDGYGVDKNYEKAFEWYTKA 320
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ Q++LG Y +++AV+ +A+ GH AQY L G+G
Sbjct: 321 AEQGNVYAQYSLGFMYNNGQGTKKDEKKAVEWYTKAAEQGHSSAQYFLGFMYDNGQGTKK 380
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A WY +AAE G+ A N Y+ G G+ +++++A + RAA+ G+ AQ
Sbjct: 381 DEKKAVEWYTKAAEQGHSSAQNNLGTIYANGTGVEINYKKAFELYTRAAEQGNAYAQNNL 440
Query: 276 GLGLFTEGEMMK 287
G ++ G+ +K
Sbjct: 441 GY-MYENGKGVK 451
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 120/302 (39%), Gaps = 56/302 (18%)
Query: 77 TLPQLRAASLVCKSWN----DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGA 132
TLPQ ++ DA EA LL GKR+ G GV K+ KA + F KGA
Sbjct: 52 TLPQNEKPEETISEFDKLKLDAESGNSEAQYLL--GKRYSDGDGVEKDYKKAFEWFKKGA 109
Query: 133 ARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDPAGQFNLGISYLQ------- 181
+G+ A G+ Y E AI LY++A G+ Q NLG Y
Sbjct: 110 DQGNANAQNALGVCYANGQGVEKNYTIAIDLYKKAIEQGNAKAQNNLGNMYYDGNGVDKN 169
Query: 182 -EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG--------- 231
E+A +L +A+ G+ AQ L G GV+ N EA +WY +AA+ G
Sbjct: 170 YEKAFELYKKAAEQGNAYAQDNLGYMYENGEGVEKNTSEAIKWYTKAADQGVANAQNNLG 229
Query: 232 --------YVR--AMY-------------NTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
Y R AMY N Y G G+ ++QA +W +AA+ G+
Sbjct: 230 WIYEDREEYNRAAAMYLMAAQQGHASGQNNLGRMYYNGYGVDKDYKQAFEWYTKAAEQGN 289
Query: 269 GKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
AQ G G++ +G KA + A G A + + T +D
Sbjct: 290 VYAQSNLG-GMYYDGYGVDKNYEKAFEWYTKAAEQGNVYAQYSLGFMYNNGQGTKKDEKK 348
Query: 324 LV 325
V
Sbjct: 349 AV 350
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV KN +KA + + K A +G+ A G MY + D+K+A + Y +
Sbjct: 297 GGMYYDGYGVDKNYEKAFEWYTKAAEQGNVYAQYSLGFMYNNGQGTKKDEKKA-VEWYTK 355
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G + Q+ LG Y +++AV+ +A+ GH AQ L G GV+
Sbjct: 356 AAEQGHSSAQYFLGFMYDNGQGTKKDEKKAVEWYTKAAEQGHSSAQNNLGTIYANGTGVE 415
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N ++A Y RAAE G A N Y G+G+ + + A W K+AA+ H A+
Sbjct: 416 INYKKAFELYTRAAEQGNAYAQNNLGYMYENGKGVKIDYDTAISWFKKAAENKHPDAE 473
>gi|397667881|ref|YP_006509418.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395131292|emb|CCD09555.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
Length = 375
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 127/246 (51%), Gaps = 24/246 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 130 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 188
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA LG+ + Q+NLG+ Y Q + V YQ A+ GH ++Q +L G+
Sbjct: 189 AADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLGK 248
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 249 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 308
Query: 275 HGL----GLFTEGEMMKAVVYLELA-----TRAGETAADHVKNVILQQLSATSRDRAMLV 325
G+ G+ + +KA + A +A A+D K++ + LS +R
Sbjct: 309 LGIYYRDGIGVAADPVKAYAWFTAAKNNGFEKAASNASDLEKSMNPEDLS-KARTLGQQY 367
Query: 326 VDSWRA 331
D+++A
Sbjct: 368 TDNYKA 373
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 76/200 (38%), Gaps = 37/200 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---AISLYRQAA 164
GK + + +GV N +K L A +G+ A V YW ++ E A Y++AA
Sbjct: 59 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAA 118
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+ GQ+ LG Y G GV N A WY
Sbjct: 119 DQNNADGQYGLGYMY----------------------------DTGTGVPQNSDTAMVWY 150
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 283
+AAE G A Y G G+ QA W +AAD G+ AQ GL ++ +G
Sbjct: 151 KKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGD 209
Query: 284 ----EMMKAVVYLELATRAG 299
+ KA Y E A G
Sbjct: 210 GVPKDYQKAAEYFEKAANQG 229
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 39/178 (21%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN------------------------- 216
E+A LL + G +AQY L + +GV +N
Sbjct: 37 EKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAG 96
Query: 217 ----------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++A WY +AA+ Y Y G G+P + A W K+AA+
Sbjct: 97 FYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQ 156
Query: 267 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ A L G G + + +A+ + A G +A + ++ +Q +D
Sbjct: 157 GNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKD 214
>gi|325267696|ref|ZP_08134347.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
gi|324980820|gb|EGC16481.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
Length = 344
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 21/227 (9%)
Query: 85 SLVCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
S V + + +ALR +R+A + G +++G GVR++ +A+ + K A +G+
Sbjct: 91 SGVHQDYAEALRWIRQAAEQGHAEAQINLGAMYENGLGVRQDDAEAVRWYRKAAEQGNAA 150
Query: 139 AMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAV 185
+ GL+Y D EA + YR+AA GD Q++LG Y EAV
Sbjct: 151 IQYNLGLLYENGRNVRQDYAEA-VRWYRKAAEQGDAEAQYHLGEMYHNGQGVRQDYAEAV 209
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
K QA+ G AQ+ L G+GV + EA +WY +AA+ G +A YN L Y
Sbjct: 210 KWYRQAAAQGFAEAQFNLGAMYDNGQGVHQDYAEAVKWYRQAADQGNAKAQYNLGLLYDN 269
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYL 292
G G+ + +A KW ++AAD G+ AQ G G++ G+ + ++L
Sbjct: 270 GRGVHQDYAEAVKWYRQAADQGNADAQYHLG-GMYHNGQGVHQDLHL 315
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 87 VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V + + +ALR +R+A G + G GV ++ +AL + A +G A
Sbjct: 57 VRQDYAEALRWIRQAAEQGVAAAQNNLGMLYYTGSGVHQDYAEALRWIRQAAEQGHAEAQ 116
Query: 141 VDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKL 187
++ G MY D EA + YR+AA G+ A Q+NLG+ Y EAV+
Sbjct: 117 INLGAMYENGLGVRQDDAEA-VRWYRKAAEQGNAAIQYNLGLLYENGRNVRQDYAEAVRW 175
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+A+ G AQY L H G+GV + EA +WY +AA G+ A +N Y G+
Sbjct: 176 YRKAAEQGDAEAQYHLGEMYHNGQGVRQDYAEAVKWYRQAAAQGFAEAQFNLGAMYDNGQ 235
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
G+ + +A KW ++AAD G+ KAQ GL L+ G
Sbjct: 236 GVHQDYAEAVKWYRQAADQGNAKAQYNLGL-LYDNG 270
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA 155
A + G +++GR VR++ +A+ + K A +G A G MY D EA
Sbjct: 149 AAIQYNLGLLYENGRNVRQDYAEAVRWYRKAAEQGDAEAQYHLGEMYHNGQGVRQDYAEA 208
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
+ YRQAA G QFNLG Y EAVK QA+ G+ +AQY L L
Sbjct: 209 -VKWYRQAAAQGFAEAQFNLGAMYDNGQGVHQDYAEAVKWYRQAADQGNAKAQYNLGLLY 267
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + EA +WY +AA+ G A Y+ Y G+G+ +++W A + G
Sbjct: 268 DNGRGVHQDYAEAVKWYRQAADQGNADAQYHLGGMYHNGQGVHQDLHLSKEWFGTACNRG 327
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRG 212
RQ A G QFNLG+ Y + V+ Y QA+ G AQ L + + G G
Sbjct: 33 RQLAQQGVADAQFNLGLMYYNGQGVRQDYAEALRWIRQAAEQGVAAAQNNLGMLYYTGSG 92
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + EA RW +AAE G+ A N Y G G+ +A +W ++AA+ G A
Sbjct: 93 VHQDYAEALRWIRQAAEQGHAEAQINLGAMYENGLGVRQDDAEAVRWYRKAAE--QGNAA 150
Query: 273 LEHGLGLFTE 282
+++ LGL E
Sbjct: 151 IQYNLGLLYE 160
>gi|54298117|ref|YP_124486.1| hypothetical protein lpp2174 [Legionella pneumophila str. Paris]
gi|53751902|emb|CAH13326.1| hypothetical protein lpp2174 [Legionella pneumophila str. Paris]
Length = 373
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 126/246 (51%), Gaps = 24/246 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 128 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 186
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA LG+ + Q+NLG+ Y Q + V YQ A+ GH ++Q +L G+
Sbjct: 187 AADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLGK 246
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 247 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 306
Query: 275 HGL----GLFTEGEMMKAVVYLELATRAG-----ETAADHVKNVILQQLSATSRDRAMLV 325
G+ G+ + +KA + A G A+D K++ + LS +R
Sbjct: 307 LGIYYRDGIGVAADPVKAYAWFTAAKNNGFEKATSNASDLEKSMNPEDLS-KARTLGQQY 365
Query: 326 VDSWRA 331
D+++A
Sbjct: 366 TDNYKA 371
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 76/200 (38%), Gaps = 37/200 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---AISLYRQAA 164
GK + + +GV N +K L A +G+ A V YW ++ E A Y++AA
Sbjct: 57 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAA 116
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+ GQ+ LG Y G GV N A WY
Sbjct: 117 DQNNADGQYGLGYMY----------------------------DTGTGVPQNSDTAMVWY 148
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 283
+AAE G A Y G G+ QA W +AAD G+ AQ GL ++ +G
Sbjct: 149 KKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGD 207
Query: 284 ----EMMKAVVYLELATRAG 299
+ KA Y E A G
Sbjct: 208 GVPKDYQKAAEYFEKAANQG 227
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 39/178 (21%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN------------------------- 216
E+A LL + G +AQY L + +GV +N
Sbjct: 35 EKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAG 94
Query: 217 ----------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++A WY +AA+ Y Y G G+P + A W K+AA+
Sbjct: 95 FYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQ 154
Query: 267 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ A L G G + + +A+ + A G +A + ++ +Q +D
Sbjct: 155 GNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKD 212
>gi|221068721|ref|ZP_03544826.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220713744|gb|EED69112.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 288
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 18/253 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEA 155
+A L G+ + GRGV ++ ++A F AA+G+ L+ + GLMY +
Sbjct: 36 DAQAQLDLGQIYVEGRGVAQSDERAAHWFGLAAAQGNALSQSNLGLMYDRGRGVKQSDQE 95
Query: 156 AISLYRQAAVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCL 207
A+ YR +A G+ GQFNLG+ Y +EAVK A+ + AQY L L
Sbjct: 96 AVRWYRLSAAQGEANGQFNLGVMYEDGRGVEQSDQEAVKWYRLAAAQNLLDAQYNLGLMY 155
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV+ + QEAARW+ A G+ N ++ Y+ G G+P ++A + + AA+ G
Sbjct: 156 VSGRGVEQSDQEAARWFGITAARGHDSGQANLAVMYATGRGVPRDEKEAARLLGLAAEQG 215
Query: 268 HGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
+ AQ+ G +F EG + +A + LA G +++ + ++L R
Sbjct: 216 NATAQVNLGT-MFEEGRGVRRSLSQAYFWYALAAAQGLEDTVSLRDAVARKLKPAERAAQ 274
Query: 323 MLVVDSWRAMPSL 335
+ W+ P +
Sbjct: 275 DSRISRWKPKPQI 287
>gi|349610788|ref|ZP_08890114.1| hypothetical protein HMPREF1028_02089, partial [Neisseria sp.
GT4A_CT1]
gi|348615607|gb|EGY65119.1| hypothetical protein HMPREF1028_02089 [Neisseria sp. GT4A_CT1]
Length = 454
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 26/236 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQA 163
+ +G+GVR++ +A+ + K A +G+ A + G+MY D + A+ YR+A
Sbjct: 18 YNNGQGVRQDYMQAVHWYRKAAEQGNVNAQFNLGVMY---DTGQGVRQDYAQAVQWYRKA 74
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+NLG+ Y +AV+ +A+ G +AQY+L + GRGV
Sbjct: 75 AEQGLADAQYNLGVMYANGQGVRQDDAQAVQWYRKAAEQGIAKAQYKLGVAYTNGRGVRQ 134
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+L +A +W+ +AAE G+ +A YN + Y+ G+G+ + QA +W ++AA+ G KAQ +
Sbjct: 135 DLVQAVQWFGKAAEQGHAKAQYNLGVMYANGQGVRQGYTQAVQWYRKAAEQGDAKAQ--Y 192
Query: 276 GLGLFTEGE------MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
LG+ + E +AV + A G A + V+ ++ +D A V
Sbjct: 193 NLGVMYDNERGVRQDYAQAVHWYRKAAEQGIAQAQYNLGVMYEKGLGVRQDDAQAV 248
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 24/238 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + +G+GVR+ +A+ + K A +G A + G+MY D + A+ Y
Sbjct: 159 GVMYANGQGVRQGYTQAVQWYRKAAEQGDAKAQYNLGVMY---DNERGVRQDYAQAVHWY 215
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA G Q+NLG+ Y + +AV+ +A+ G AQY L + GRG
Sbjct: 216 RKAAEQGIAQAQYNLGVMYEKGLGVRQDDAQAVQWYRKAAEQGIAEAQYNLGVMYKEGRG 275
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +A +WY +AAE G A N + Y+ G+G+ + QA +W ++AA+ G AQ
Sbjct: 276 VRQDDAQAVQWYRKAAEQGLANAQSNLGVAYTNGQGVRQDYAQAVQWYRKAAEQGLADAQ 335
Query: 273 LEHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
G+ ++ EG ++ AV + A + G+ A + + Q +D A V
Sbjct: 336 SNLGV-MYKEGRGVRQDDAQAVQWYRKAAKQGDAEAQYNLGGMYVQGRGVRQDDAQAV 392
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + + EA L G +K GRGVR++ +A+ + K A +G A + G+ Y
Sbjct: 255 AEQGIAEAQYNL--GVMYKEGRGVRQDDAQAVQWYRKAAEQGLANAQSNLGVAYTNGQGV 312
Query: 150 -MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
D +A + YR+AA G Q NLG+ Y + +AV+ +A+ G AQ
Sbjct: 313 RQDYAQA-VQWYRKAAEQGLADAQSNLGVMYKEGRGVRQDDAQAVQWYRKAAKQGDAEAQ 371
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y L +GRGV + +A +WY +AAE G A YN + Y+ GEG+ +++ A++W
Sbjct: 372 YNLGGMYVQGRGVRQDDAQAVQWYRKAAEQGLAEAQYNLGVMYAKGEGVRQNYKIAKEWF 431
Query: 261 KRAADCG 267
+A D G
Sbjct: 432 GKACDNG 438
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G GVR++ +A+ + K A +G A + G+MY E D +A + YR+
Sbjct: 231 GVMYEKGLGVRQDDAQAVQWYRKAAEQGIAEAQYNLGVMYKEGRGVRQDDAQA-VQWYRK 289
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG++Y + V+ Y +A+ G AQ L + GRGV
Sbjct: 290 AAEQGLANAQSNLGVAYTNGQGVRQDYAQAVQWYRKAAEQGLADAQSNLGVMYKEGRGVR 349
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A +WY +AA+ G A YN Y G G+ QA +W ++AA+ G +AQ
Sbjct: 350 QDDAQAVQWYRKAAKQGDAEAQYNLGGMYVQGRGVRQDDAQAVQWYRKAAEQGLAEAQYN 409
Query: 275 HGLGLFTEGEMMK 287
G+ ++ +GE ++
Sbjct: 410 LGV-MYAKGEGVR 421
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G QFNLG Y + V+ Y +A+ G+V AQ+ L + G+GV
Sbjct: 2 AAEQGIAKAQFNLGFMYNNGQGVRQDYMQAVHWYRKAAEQGNVNAQFNLGVMYDTGQGVR 61
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A +WY +AAE G A YN + Y+ G+G+ QA +W ++AA+ G KAQ +
Sbjct: 62 QDYAQAVQWYRKAAEQGLADAQYNLGVMYANGQGVRQDDAQAVQWYRKAAEQGIAKAQYK 121
Query: 275 HGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVIL 311
G+ +T G ++++AV + A G A + V+
Sbjct: 122 LGV-AYTNGRGVRQDLVQAVQWFGKAAEQGHAKAQYNLGVMY 162
>gi|410634931|ref|ZP_11345556.1| hypothetical protein GLIP_0106 [Glaciecola lipolytica E3]
gi|410145505|dbj|GAC12761.1| hypothetical protein GLIP_0106 [Glaciecola lipolytica E3]
Length = 853
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G ++ G GV ++ +A+ F K + + A+V+ GL Y D K A LY A
Sbjct: 667 GILYRDGDGVTQSHSEAVKWFRKSVEQDNADALVNLGLQYSRGDGVPQNKAEAARLYLAA 726
Query: 164 AVLGDPAGQFNLGISY-----LQE---EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD GQ NLG Y +Q+ EA+K +++ GH AQ L L RG GV
Sbjct: 727 AEKGDEWGQNNLGALYRNGEGVQQSHTEAIKWFRKSADQGHASAQVNLGLQYERGHGVTQ 786
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ EA +WY +AAE G V Y+ LCY +G G+ S A +W K+AA GH +Q
Sbjct: 787 SNTEAVKWYRKAAEQGNVWGQYDLGLCYEYGRGVNKSLSTAIEWYKKAARGGHKSSQ 843
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 93 DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----- 147
+ L P +A+ R G +++G+ V K+ +A+ + + +A+G + + G M+
Sbjct: 581 EGLNP-SDAVEQFRLGNDYRNGKDVEKSYPQAIYWYTRSSAQGHGGSSNNLGFMHEYGYG 639
Query: 148 WEMDKKEAAISLYRQAAVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRA 199
+ KEAA Y + A GD Q N+GI Y EAVK ++ + A
Sbjct: 640 LKKSSKEAA-KWYMKGAEQGDDYAQNNIGILYRDGDGVTQSHSEAVKWFRKSVEQDNADA 698
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
L L RG GV N EAAR YL AAE G N Y GEG+ SH +A KW
Sbjct: 699 LVNLGLQYSRGDGVPQNKAEAARLYLAAAEKGDEWGQNNLGALYRNGEGVQQSHTEAIKW 758
Query: 260 MKRAADCGHGKAQLEHGL 277
+++AD GH AQ+ GL
Sbjct: 759 FRKSADQGHASAQVNLGL 776
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLG 167
++G G++K+ +A ++KGA +G A + G++Y + D A+ +R++
Sbjct: 635 EYGYGLKKSSKEAAKWYMKGAEQGDDYAQNNIGILYRDGDGVTQSHSEAVKWFRKSVEQD 694
Query: 168 DPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+ NLG+ Y + EA +L A+ G Q L G GV + E
Sbjct: 695 NADALVNLGLQYSRGDGVPQNKAEAARLYLAAAEKGDEWGQNNLGALYRNGEGVQQSHTE 754
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL-- 277
A +W+ ++A+ G+ A N L Y G G+ S+ +A KW ++AA+ G+ Q + GL
Sbjct: 755 AIKWFRKSADQGHASAQVNLGLQYERGHGVTQSNTEAVKWYRKAAEQGNVWGQYDLGLCY 814
Query: 278 --GLFTEGEMMKAVVYLELATRAGETAA 303
G + A+ + + A R G ++
Sbjct: 815 EYGRGVNKSLSTAIEWYKKAARGGHKSS 842
>gi|148826087|ref|YP_001290840.1| Sel1 domain-containing protein [Haemophilus influenzae PittEE]
gi|148716247|gb|ABQ98457.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae PittEE]
Length = 384
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 161 GNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEA-VKWYRK 219
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G QFNLG Y EAVK +A+ GH +AQY L GRGV
Sbjct: 220 AAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVK 279
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA +WY +AAE GY A N YS G G+ + +A KW K+AA+ G Q +
Sbjct: 280 QDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVRQDYIEAVKWFKKAAENGSADGQFK 339
Query: 275 HGL 277
GL
Sbjct: 340 LGL 342
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
Query: 97 PLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----W 148
PL E A + G +K G+G++++ +A+ F K A +G A ++ G MY
Sbjct: 39 PLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWFRKAAEQGVADAQLNWGNMYAKGLGV 98
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQ 200
+ D EA + YRQAA G+ QFNLG+ Y EAVK +A+ G+ AQ
Sbjct: 99 KQDDVEA-VKWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYFEAVKWFRKAAEQGYADAQ 157
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ L + G GV + EA +WY +AAE GY A +N Y G G+ +A KW
Sbjct: 158 FNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWY 217
Query: 261 KRAADCGHGKAQLEHGLGLFTEGEMMK 287
++AA+ G+ AQ G ++ G +K
Sbjct: 218 RKAAEQGYADAQFNLG-NMYYNGHGVK 243
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 197 GNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEA-VKWYRK 255
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q+NLG Y EAVK +A+ G+ AQ L G GV
Sbjct: 256 AAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVR 315
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ EA +W+ +AAE G + L Y G+G+ A++W+ +A D G+
Sbjct: 316 QDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTLAKEWLGKACDNGN 369
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+ A KL + G+ Q+ L L +G+G+ + EA +W+ +AAE G A N
Sbjct: 31 QTAFKLWLPLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWFRKAAEQGVADAQLNWGN 90
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
Y+ G G+ +A KW ++AA+ G+ KAQ GL ++ G +K
Sbjct: 91 MYAKGLGVKQDDVEAVKWYRQAAEQGNAKAQFNLGL-MYDNGRGVK 135
>gi|52842435|ref|YP_096234.1| hypothetical protein lpg2222 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378778123|ref|YP_005186561.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52629546|gb|AAU28287.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|364508938|gb|AEW52462.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 375
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 116/220 (52%), Gaps = 19/220 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 130 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 188
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA LG+ + Q+NLG+ Y Q + V YQ A+ GH ++Q +L G+
Sbjct: 189 AADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLGK 248
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 249 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 308
Query: 275 HGL----GLFTEGEMMKAVVYLELATRAG-ETAADHVKNV 309
G+ G+ + +KA + A G E AA + ++
Sbjct: 309 LGIYYRDGIGVAADPVKAYAWFTAAKNNGFEKAASNASDL 348
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 76/200 (38%), Gaps = 37/200 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---AISLYRQAA 164
GK + + +GV N +K L A +G+ A V YW ++ E A Y++AA
Sbjct: 59 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAA 118
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+ GQ+ LG Y G GV N A WY
Sbjct: 119 DQNNADGQYGLGYMY----------------------------DTGTGVPQNSDTAMVWY 150
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 283
+AAE G A Y G G+ QA W +AAD G+ AQ GL ++ +G
Sbjct: 151 KKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGD 209
Query: 284 ----EMMKAVVYLELATRAG 299
+ KA Y E A G
Sbjct: 210 GVPKDYQKAAEYFEKAANQG 229
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 39/178 (21%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN------------------------- 216
E+A LL + G +AQY L + +GV +N
Sbjct: 37 EKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAG 96
Query: 217 ----------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++A WY +AA+ Y Y G G+P + A W K+AA+
Sbjct: 97 FYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQ 156
Query: 267 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ A L G G + + +A+ + A G +A + ++ +Q +D
Sbjct: 157 GNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKD 214
>gi|189219667|ref|YP_001940308.1| TPR repeat protein, SEL1 subfamily [Methylacidiphilum infernorum
V4]
gi|189186525|gb|ACD83710.1| TPR repeat protein, SEL1 subfamily [Methylacidiphilum infernorum
V4]
Length = 526
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 18/188 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + G+GV +N +A+ + K A +G +A + GL+Y DK A+ +
Sbjct: 305 GTAYLDGKGVPQNYVQAIYWYQKAAKQGDIVAQFNLGLLY---DKGRGVSQDYAQAVYWW 361
Query: 161 RQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
RQAA GD Q NLG +Y +AV +A+ G+ AQ L + ++G G
Sbjct: 362 RQAAEKGDAGSQLNLGYAYDYGQGVPQDHAQAVYWYQKAAEQGNAMAQSNLGVAYYKGLG 421
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +A W+ +AAE GY A N Y +G+G+P H QA W ++AA+ G+ AQ
Sbjct: 422 VRQDYIQAVYWFKKAAEQGYPIAQLNLGYAYDYGQGVPQDHAQAVYWYQKAAEQGNAMAQ 481
Query: 273 LEHGLGLF 280
GL F
Sbjct: 482 FNLGLAYF 489
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPA 170
GV K+ DKA+ F K A +G +L+ G Y D +AA + YR+AA GDP
Sbjct: 133 GVPKDFDKAVYWFRKAAEQGHSLSQFVMGRAYTVGVGVPKDLSQAA-NWYRKAAEQGDPR 191
Query: 171 GQFNLGISY-----LQEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NLG +Y + ++ V+ +Y +A+ + +AQ+ L + ++G GV + +A
Sbjct: 192 AQLNLGYAYDYGQGVPQDYVQAVYWYQKAAEQDNAKAQFCLGVAYYKGLGVHQDSIQAVY 251
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 278
W+ +AAE G V A + L Y G G+P + QA W ++AA+ G+ +AQ E G G
Sbjct: 252 WFRKAAEQGLVEAQFELGLAYYEGRGVPQDYIQAVYWYEKAAEQGNAQAQCELGTAYLDG 311
Query: 279 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
++A+ + + A + G+ A ++ + S+D A V WR
Sbjct: 312 KGVPQNYVQAIYWYQKAAKQGDIVAQFNLGLLYDKGRGVSQDYAQAVY-WWR 362
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALC 206
A+ YR+AA G+ Q+ LG +Y ++AV +A+ GH +Q+ +
Sbjct: 104 AVYWYRKAAEQGNVQAQYKLGFAYYWGVGGVPKDFDKAVYWFRKAAEQGHSLSQFVMGRA 163
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G GV +L +AA WY +AAE G RA N Y +G+G+P + QA W ++AA+
Sbjct: 164 YTVGVGVPKDLSQAANWYRKAAEQGDPRAQLNLGYAYDYGQGVPQDYVQAVYWYQKAAEQ 223
Query: 267 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG 299
+ KAQ G+ GL + ++AV + A G
Sbjct: 224 DNAKAQFCLGVAYYKGLGVHQDSIQAVYWFRKAAEQG 260
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
L G + +G+GV ++ +A+ + K A + + A G+ Y++ A+ +
Sbjct: 194 LNLGYAYDYGQGVPQDYVQAVYWYQKAAEQDNAKAQFCLGVAYYKGLGVHQDSIQAVYWF 253
Query: 161 RQAAVLGDPAGQFNLGISYLQ-----EEAVKLLY---QASIAGHVRAQYQLALCLHRGRG 212
R+AA G QF LG++Y + ++ ++ +Y +A+ G+ +AQ +L G+G
Sbjct: 254 RKAAEQGLVEAQFELGLAYYEGRGVPQDYIQAVYWYEKAAEQGNAQAQCELGTAYLDGKG 313
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V N +A WY +AA+ G + A +N L Y G G+ + QA W ++AA+ G +Q
Sbjct: 314 VPQNYVQAIYWYQKAAKQGDIVAQFNLGLLYDKGRGVSQDYAQAVYWWRQAAEKGDAGSQ 373
Query: 273 LEHGLGL-FTEG---EMMKAVVYLELATRAGETAA 303
L G + +G + +AV + + A G A
Sbjct: 374 LNLGYAYDYGQGVPQDHAQAVYWYQKAAEQGNAMA 408
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + GRGV ++ +A+ + + A +G + ++ G Y D + A+ Y
Sbjct: 341 GLLYDKGRGVSQDYAQAVYWWRQAAEKGDAGSQLNLGYAY---DYGQGVPQDHAQAVYWY 397
Query: 161 RQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA G+ Q NLG++Y + +AV +A+ G+ AQ L G+G
Sbjct: 398 QKAAEQGNAMAQSNLGVAYYKGLGVRQDYIQAVYWFKKAAEQGYPIAQLNLGYAYDYGQG 457
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA---DCGHG 269
V + +A WY +AAE G A +N L Y G G+ + +A W +RAA D
Sbjct: 458 VPQDHAQAVYWYQKAAEQGNAMAQFNLGLAYFEGLGITQNSIEAVHWFRRAAENNDVAVK 517
Query: 270 KAQLEH 275
K+ LE+
Sbjct: 518 KSDLEN 523
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
++ L Q + G+ +AQ L RG+GV +L +A WY +AAE G V+A Y Y
Sbjct: 68 SITQLEQRARGGNAQAQLDLGDAYSRGQGVTKDLAQAVYWYRKAAEQGNVQAQYKLGFAY 127
Query: 244 SFG-EGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+G G+P +A W ++AA+ GH +Q G
Sbjct: 128 YWGVGGVPKDFDKAVYWFRKAAEQGHSLSQFVMG 161
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISL 159
L G + +G+GV ++ +A+ + K A +G+ +A + G+ Y++ D +A +
Sbjct: 374 LNLGYAYDYGQGVPQDHAQAVYWYQKAAEQGNAMAQSNLGVAYYKGLGVRQDYIQA-VYW 432
Query: 160 YRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+++AA G P Q NLG +Y +AV +A+ G+ AQ+ L L G
Sbjct: 433 FKKAAEQGYPIAQLNLGYAYDYGQGVPQDHAQAVYWYQKAAEQGNAMAQFNLGLAYFEGL 492
Query: 212 GVDFNLQEAARWYLRAAE 229
G+ N EA W+ RAAE
Sbjct: 493 GITQNSIEAVHWFRRAAE 510
>gi|429750134|ref|ZP_19283195.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429165816|gb|EKY07845.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 262
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G G+ ++L+KA++ F K A +G + V GL Y E K+AA + +
Sbjct: 78 GVCYHKGEGIEESLEKAVEWFEKSAKQGDSEGQVLLGLSYCMGTGVEQSFKKAA-EWFEK 136
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA GD GQ LG Y E V+ ++ A+ G+ AQY LA C H G GV+
Sbjct: 137 AAKQGDAEGQCALGECYSNGEGVEQSFEKAAEWFEKAAEQGYAGAQYSLAYCYHNGEGVE 196
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ +AA W +++A+ GY +A Y LCY GEG+ +S +A W ++ D
Sbjct: 197 QSDSKAAEWLMKSAQQGYAKAQYFLGLCYDKGEGVEISKEKALYWFIKSCD 247
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 13/188 (6%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAA 164
K + G V ++ +KA+ + K A +G A G+ Y + + E A+ + ++A
Sbjct: 43 KCYYDGEEVEQSFEKAVKWYEKAAKQGYAKAQNALGVCYHKGEGIEESLEKAVEWFEKSA 102
Query: 165 VLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
GD GQ LG+SY ++A + +A+ G Q L C G GV+ +
Sbjct: 103 KQGDSEGQVLLGLSYCMGTGVEQSFKKAAEWFEKAAKQGDAEGQCALGECYSNGEGVEQS 162
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
++AA W+ +AAE GY A Y+ + CY GEG+ S +A +W+ ++A G+ KAQ G
Sbjct: 163 FEKAAEWFEKAAEQGYAGAQYSLAYCYHNGEGVEQSDSKAAEWLMKSAQQGYAKAQYFLG 222
Query: 277 LGLFTEGE 284
L + +GE
Sbjct: 223 L-CYDKGE 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q+NL Y E+AVK +A+ G+ +AQ L +C H+G G++ +L+
Sbjct: 33 GDAEAQYNLAKCYYDGEEVEQSFEKAVKWYEKAAKQGYAKAQNALGVCYHKGEGIEESLE 92
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A W+ ++A+ G L Y G G+ S ++A +W ++AA G + Q G
Sbjct: 93 KAVEWFEKSAKQGDSEGQVLLGLSYCMGTGVEQSFKKAAEWFEKAAKQGDAEGQCALGE- 151
Query: 279 LFTEGE-----MMKAVVYLELATRAGETAADH 305
++ GE KA + E A G A +
Sbjct: 152 CYSNGEGVEQSFEKAAEWFEKAAEQGYAGAQY 183
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
I Q + ++ L + G AQY LA C + G V+ + ++A +WY +AA+ GY +A
Sbjct: 15 IGCKQTDNIETLTAKAEKGDAEAQYNLAKCYYDGEEVEQSFEKAVKWYEKAAKQGYAKAQ 74
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYL 292
+CY GEG+ S +A +W +++A G + Q L + +G E KA +
Sbjct: 75 NALGVCYHKGEGIEESLEKAVEWFEKSAKQGDSEGQVLLGLSYCMGTGVEQSFKKAAEWF 134
Query: 293 ELATRAGET 301
E A + G+
Sbjct: 135 EKAAKQGDA 143
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 14/145 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
E VLL G + G GV ++ KA + F K A +G G Y + E
Sbjct: 108 EGQVLL--GLSYCMGTGVEQSFKKAAEWFEKAAKQGDAEGQCALGECYSNGEGVEQSFEK 165
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCL 207
A + +AA G Q++L Y E V+ L +++ G+ +AQY L LC
Sbjct: 166 AAEWFEKAAEQGYAGAQYSLAYCYHNGEGVEQSDSKAAEWLMKSAQQGYAKAQYFLGLCY 225
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGY 232
+G GV+ + ++A W++++ + Y
Sbjct: 226 DKGEGVEISKEKALYWFIKSCDNSY 250
>gi|325981066|ref|YP_004293468.1| Sel1 domain-containing protein repeat-containing protein
[Nitrosomonas sp. AL212]
gi|325530585|gb|ADZ25306.1| Sel1 domain protein repeat-containing protein [Nitrosomonas sp.
AL212]
Length = 1145
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 116/230 (50%), Gaps = 19/230 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-MDKK---EA 155
+AM L G + G GV ++L+KAL + + GST A+V+ G+ + E D K E
Sbjct: 659 DAMNFL--GLFYLKGIGVVRDLEKALYWYQQAVKHGSTAAIVNLGVCFTEGKDIKQNWEK 716
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKL-------LYQASIA-GHVRAQYQLALCL 207
AI L++ AA LG+ NLG+ Y + E V+ LYQ +I G A LA C
Sbjct: 717 AIDLFQWAADLGNNIAMLNLGVRYEKGEGVEQNWDKAVDLYQQAIKHGSSEAMVNLAQCY 776
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G GV+ N EA Y +AAE G A+ N CY GEG+ + +A + +RAA G
Sbjct: 777 AKGTGVEQNWNEAFHLYRQAAEQGISLALNNLGSCYEKGEGVEQNWEKAIIYYQRAALQG 836
Query: 268 HGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA-DHVKNVILQ 312
+ A + G G + KAV + A + GET A D+++ +L+
Sbjct: 837 NPSAMVNLGAYYQYGPINQQNWNKAVDLYQKAFKGGETKALDNIRYTLLE 886
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AI 157
+ +L G R++ G GV +N DKA+D + + GS+ AMV+ Y + E A
Sbjct: 731 IAMLNLGVRYEKGEGVEQNWDKAVDLYQQAIKHGSSEAMVNLAQCYAKGTGVEQNWNEAF 790
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCLHR 209
LYRQAA G NLG Y + E V+ + YQ A++ G+ A L
Sbjct: 791 HLYRQAAEQGISLALNNLGSCYEKGEGVEQNWEKAIIYYQRAALQGNPSAMVNLGAYYQY 850
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYN---TSLCYSFGEGLPLSHRQARK 258
G N +A Y +A +GG +A+ N T L G+G +++R ++
Sbjct: 851 GPINQQNWNKAVDLYQKAFKGGETKALDNIRYTLLEIFLGKGNYITNRSYQR 902
Score = 39.3 bits (90), Expect = 2.9, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V ++WN+A R+A + L G ++ G GV +N +KA+ + + A +G+ AM
Sbjct: 782 VEQNWNEAFHLYRQAAEQGISLALNNLGSCYEKGEGVEQNWEKAIIYYQRAALQGNPSAM 841
Query: 141 VDAGLMYW----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ 181
V+ G Y A+ LY++A G+ N+ + L+
Sbjct: 842 VNLGAYYQYGPINQQNWNKAVDLYQKAFKGGETKALDNIRYTLLE 886
>gi|46446345|ref|YP_007710.1| hypothetical protein pc0711 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399986|emb|CAF23435.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 412
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYR 161
+ G + G GV ++ + F A +G +A G MY E K+ A ++
Sbjct: 115 KLGLMYDEGCGVTQSKQETFKYFKLAADQGHVMAEYSLGAMYDEGCGVTQSKQEAFKYFK 174
Query: 162 QAAVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA GD Q+ LG Y ++EA K A+ GH AQY+L + GR V
Sbjct: 175 FAADQGDATAQYKLGAMYDEGSGVTRSEQEAFKYFKLAADQGHATAQYKLGIIYGYGRCV 234
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ QEA ++Y AA+ G+V A Y+ L Y++G G+ S ++A K+ K AAD GH KAQ
Sbjct: 235 TNSEQEAFKYYKLAADQGHVMAQYSLGLTYAYGWGVKQSKQEAFKYFKLAADQGHAKAQY 294
Query: 274 EHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVI 310
+ G + G +K A+ Y +LA G A + +I
Sbjct: 295 QLG-DTYKNGRGVKRSKQEAIKYYKLAADQGYADAQYYLGII 335
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 25/251 (9%)
Query: 87 VCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V +S +A + + +A + G + G GV ++ +A F A +G A
Sbjct: 162 VTQSKQEAFKYFKFAADQGDATAQYKLGAMYDEGSGVTRSEQEAFKYFKLAADQGHATAQ 221
Query: 141 VDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLL 188
G++Y + ++ A Y+ AA G Q++LG++Y ++EA K
Sbjct: 222 YKLGIIYGYGRCVTNSEQEAFKYYKLAADQGHVMAQYSLGLTYAYGWGVKQSKQEAFKYF 281
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
A+ GH +AQYQL GRGV + QEA ++Y AA+ GY A Y + Y
Sbjct: 282 KLAADQGHAKAQYQLGDTYKNGRGVKRSKQEAIKYYKLAADQGYADAQYYLGIIYDKKRD 341
Query: 249 LPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGET-A 302
S ++A K+ K AAD GH AQ G+ ++ +G + A+ Y +LA + G+T A
Sbjct: 342 AIQSKQEAFKYFKLAADQGHADAQYFVGM-MYQKGRGVSPSEEGAIKYYKLAAKQGDTMA 400
Query: 303 ADHVKNVILQQ 313
A + ++I +Q
Sbjct: 401 ASKINSIISRQ 411
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +AQY+L L G GV + QE +++ AA+ G+V A Y+ Y G G+ S +
Sbjct: 108 GDTKAQYKLGLMYDEGCGVTQSKQETFKYFKLAADQGHVMAEYSLGAMYDEGCGVTQSKQ 167
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNV 309
+A K+ K AAD G AQ + G ++ EG + +A Y +LA G A + +
Sbjct: 168 EAFKYFKFAADQGDATAQYKLG-AMYDEGSGVTRSEQEAFKYFKLAADQGHATAQYKLGI 226
Query: 310 I 310
I
Sbjct: 227 I 227
>gi|299530688|ref|ZP_07044103.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
gi|298721204|gb|EFI62146.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
Length = 427
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 114/214 (53%), Gaps = 20/214 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R++ G+GV ++L +A+ + + A +G A D G++Y +D+ +A ++ YR+
Sbjct: 150 GSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYANGRGVTLDEAQA-VNWYRK 208
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD Q NLG+ Y + +AV+ +++ +G QY L + L GRGV
Sbjct: 209 AAEQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 268
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ + A +W+ +AAE G+ A YNT + Y+ G +P +A +W++++A G+ AQ
Sbjct: 269 EDGRAALQWFEQAAEKGHADAQYNTGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSS 328
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAGETAA 303
G L+ G+ + +A + + A + G T A
Sbjct: 329 LGF-LYANGQGVPQDAGQAARWFDRAAKQGYTLA 361
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
QY L G+GV+ +L +A WY ++A+ GY A + + Y+ G G+ L QA W
Sbjct: 146 QYLLGSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYANGRGVTLDEAQAVNW 205
Query: 260 MKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVIL 311
++AA+ G G AQ GL ++ EG + +AV + E + ++GE A + V+L
Sbjct: 206 YRKAAEQGDGIAQNNLGL-MYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVML 261
>gi|229847119|ref|ZP_04467224.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae 7P49H1]
gi|229809948|gb|EEP45669.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae 7P49H1]
Length = 384
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 97 PLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----W 148
PL E A + G +K G+G++++ +A+ F K A +G A ++ G MY
Sbjct: 39 PLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWFRKAAEQGVADAQLNLGNMYAKGLGV 98
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQ 200
+ D EA + YRQAA G+ QFNLG+ Y EAVK +A+ G+ AQ
Sbjct: 99 KQDDVEA-VKWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYFEAVKWFRKAAEQGYADAQ 157
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ L ++G GV + EA +WY +AAE GY A +N Y G G+ +A KW
Sbjct: 158 FNLGNMYYKGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWY 217
Query: 261 KRAADCGHGKAQLEHGLGLFTEGEMMK 287
++AA+ G+ AQ G ++ G +K
Sbjct: 218 RKAAEQGYADAQFNLG-NMYYNGHGVK 243
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G GV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 161 GNMYYKGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEA-VKWYRK 219
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G QFNLG Y EAVK +A+ GH +AQY L GRGV
Sbjct: 220 AAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVK 279
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA +WY +AAE GY A N YS G G+ + +A KW K+AA+ G Q +
Sbjct: 280 QDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVRQDYIEAVKWFKKAAENGSADGQFK 339
Query: 275 HGL 277
GL
Sbjct: 340 LGL 342
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 197 GNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEA-VKWYRK 255
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q+NLG Y EAVK +A+ G+ AQ L G GV
Sbjct: 256 AAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVR 315
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ EA +W+ +AAE G + L Y G+G+ A++W+ +A D G+
Sbjct: 316 QDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTLAKEWLGKACDNGN 369
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+ A KL + G+ Q+ L L +G+G+ + EA +W+ +AAE G A N
Sbjct: 31 QTAFKLWLPLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWFRKAAEQGVADAQLNLGN 90
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
Y+ G G+ +A KW ++AA+ G+ KAQ GL ++ G +K
Sbjct: 91 MYAKGLGVKQDDVEAVKWYRQAAEQGNAKAQFNLGL-MYDNGRGVK 135
>gi|343515268|ref|ZP_08752327.1| Sel1 domain-containing protein [Vibrio sp. N418]
gi|342798800|gb|EGU34398.1| Sel1 domain-containing protein [Vibrio sp. N418]
Length = 443
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 118/246 (47%), Gaps = 18/246 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEMDKKE---AAISLY 160
L G+ + +GV +NL +AL+ + K A +G+ A + A ++ + + E AA+ Y
Sbjct: 140 LNVGRMLEFAQGVEENLQQALEWYHKAAEQGNAEAQYNMATMLAYGIGTDEDLGAALYWY 199
Query: 161 RQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
QAA Q+++ G+ + EA+K A+ GH AQ+ LA+ L+ G
Sbjct: 200 YQAAEQNHLEAQYSVALMLELGKGVEKNKSEAIKWYLIAAQQGHAEAQFNLAMMLYFGAD 259
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
++ N +A W+LRAAE G+V A YN + Y FG G + +A W AA+ GH AQ
Sbjct: 260 IEENKPDAFTWFLRAAEQGHVEAQYNVGMMYDFGLGTEPNKTKAFIWYHHAAENGHADAQ 319
Query: 273 LE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
+ LG+ T +A + A + G AA + V+L+ +D M +
Sbjct: 320 FSLASLYELGVGTPVNKKEAYFWYVKAAKQGSVAAQYNLGVMLEAGKGIEQD--MNEAIA 377
Query: 329 WRAMPS 334
W M +
Sbjct: 378 WYTMAA 383
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM-YWEMDKKEA---AISLYRQAAVLGDP 169
G+GV KN +A+ +L A +G A + +M Y+ D +E A + + +AA G
Sbjct: 221 GKGVEKNKSEAIKWYLIAAQQGHAEAQFNLAMMLYFGADIEENKPDAFTWFLRAAEQGHV 280
Query: 170 AGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+N+G+ Y + +A + A+ GH AQ+ LA G G N +EA
Sbjct: 281 EAQYNVGMMYDFGLGTEPNKTKAFIWYHHAAENGHADAQFSLASLYELGVGTPVNKKEAY 340
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
WY++AA+ G V A YN + G+G+ +A W AA+ G ++Q
Sbjct: 341 FWYVKAAKQGSVAAQYNLGVMLEAGKGIEQDMNEAIAWYTMAAEQGDAESQ 391
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G G N +KA + F + A G + A MY+ +DK +A + Q
Sbjct: 35 GVQYYFGNGASINKEKAFELFSQAATDGHSEAQYYLSHMYYFGETTPVDKAQATRWM-EQ 93
Query: 163 AAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ Q++L GIS + A +A+ GH +AQ + L +GV+
Sbjct: 94 AAEQGNGRAQYHLATMYYHGDGISENRSMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVE 153
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
NLQ+A WY +AAE G A YN + ++G G A W +AA+ H +AQ
Sbjct: 154 ENLQQALEWYHKAAEQGNAEAQYNMATMLAYGIGTDEDLGAALYWYYQAAEQNHLEAQ 211
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G + +N A FL+ A +G A + G+MY E +K +A I Y AA G
Sbjct: 257 GADIEENKPDAFTWFLRAAEQGHVEAQYNVGMMYDFGLGTEPNKTKAFI-WYHHAAENGH 315
Query: 169 PAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
QF+L G ++EA +A+ G V AQY L + L G+G++ ++ EA
Sbjct: 316 ADAQFSLASLYELGVGTPVNKKEAYFWYVKAAKQGSVAAQYNLGVMLEAGKGIEQDMNEA 375
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
WY AAE G + Y Y S + A W ++AA GH KAQ
Sbjct: 376 IAWYTMAAEQGDAESQYILGTLYHSNLEDFESKQLAMMWYQKAAKQGHEKAQ 427
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F G S +E+A +L QA+ GH AQY L+ + G + +A RW +AAE G
Sbjct: 40 FGNGASINKEKAFELFSQAATDGHSEAQYYLSHMYYFGETTPVDKAQATRWMEQAAEQGN 99
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEG---EMMKA 288
RA Y+ + Y G+G+ + A W +AA+ GH KAQL G L F +G + +A
Sbjct: 100 GRAQYHLATMYYHGDGISENRSMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENLQQA 159
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ + A G A + +L T D
Sbjct: 160 LEWYHKAAEQGNAEAQYNMATMLAYGIGTDED 191
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y L + + G G N ++A + +AA G+ A Y S Y FGE P+ QA +WM
Sbjct: 32 YDLGVQYYFGNGASINKEKAFELFSQAATDGHSEAQYYLSHMYYFGETTPVDKAQATRWM 91
Query: 261 KRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLELATR 297
++AA+ G+G+AQ HG G+ +E M YL+ A +
Sbjct: 92 EQAAEQGNGRAQYHLATMYYHGDGI-SENRSMAFHWYLKAAEQ 133
>gi|418530668|ref|ZP_13096591.1| hypothetical protein CTATCC11996_13280 [Comamonas testosteroni ATCC
11996]
gi|371452387|gb|EHN65416.1| hypothetical protein CTATCC11996_13280 [Comamonas testosteroni ATCC
11996]
Length = 267
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEA 155
+A L G+ + GRGV ++ +KA F AA+G+ L+ + GLMY +
Sbjct: 15 DAQAQLDLGQIYVEGRGVAQSDEKAAHWFGLAAAQGNALSQSNLGLMYDRGRGVKQSDQE 74
Query: 156 AISLYRQAAVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCL 207
A+ YR +A G+ GQFNLG+ Y +EAVK A+ + AQY L L
Sbjct: 75 AVKWYRLSAAQGEANGQFNLGVMYEDGRGVEQSDQEAVKWYRLAAAQNLLDAQYNLGLMY 134
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV+ + QEAA+W+ A G+ N ++ Y+ G G+P ++A + + AA+ G
Sbjct: 135 VSGRGVEQSDQEAAKWFGITAAKGHDSGQANLAVMYATGRGVPRDEKEAARLLGLAAEQG 194
Query: 268 HGKAQLEHGLGLFTEGEMMK 287
+ AQ+ G +F EG +K
Sbjct: 195 NATAQVNLGT-MFEEGRGVK 213
>gi|264677145|ref|YP_003277051.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
gi|262207657|gb|ACY31755.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
Length = 430
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 114/214 (53%), Gaps = 20/214 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R++ G+GV ++L +A+ + + A +G A D G++Y +D+ +A ++ YR+
Sbjct: 153 GSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYANGRGVTLDEVQA-VNWYRK 211
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD Q NLG+ Y + +AV+ +++ +G QY L + L GRGV
Sbjct: 212 AAEQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 271
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ + A +W+ +AAE G+ A YNT + Y+ G +P +A +W++++A G+ AQ
Sbjct: 272 EDGRAALQWFEQAAEKGHADAQYNTGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSS 331
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAGETAA 303
G L+ G+ + +A + + A + G T A
Sbjct: 332 LGF-LYANGQGVSQDAGQAARWFDRAAKQGYTLA 364
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G +AQY L G+GV+ +L +A WY ++A+ GY A + + Y+ G G+
Sbjct: 140 AAQTGDAKAQYLLGSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYANGRGVT 199
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADH 305
L QA W ++AA+ G G AQ GL ++ EG + +AV + E + ++GE A +
Sbjct: 200 LDEVQAVNWYRKAAEQGDGIAQNNLGL-MYAEGRGVAADDAQAVQWFERSAKSGEAAGQY 258
Query: 306 VKNVIL 311
V+L
Sbjct: 259 SLGVML 264
>gi|440226926|ref|YP_007334017.1| Sel1 repeat family [Rhizobium tropici CIAT 899]
gi|440038437|gb|AGB71471.1| Sel1 repeat family [Rhizobium tropici CIAT 899]
Length = 356
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 88 CKSWNDALRPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG 144
KS D RPL A L+ G+ ++ G GV+KNL AL + K A +G+ +A + G
Sbjct: 34 IKSGLDYWRPLANKGNAAAQLKLGQMYEEGNGVKKNLTLALGWYKKAADQGNAVAQFNVG 93
Query: 145 LMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQAS 192
MY + + K AI+ Y+++A G Q+NLG+ Y + +A +A+
Sbjct: 94 TMYDQGEGVTADKGQAIAWYKKSAAQGYLNAQYNLGVVYDTGQGVAQDKPQAFAWYSKAA 153
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
G AQ+ + +G G + A WY +AAE G V A YN + Y GEG+
Sbjct: 154 EQGDTDAQFNVGTMYDQGDGTGKDKTMAVIWYRKAAEQGKVEAQYNLGIMYRDGEGVAKD 213
Query: 253 HRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
A W K+AAD G AQ G ++ +G+ +K
Sbjct: 214 SAAAFSWFKKAADQGDVSAQFNIGA-MYADGDGIK 247
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G G K+ A+ + K A +G A + G+MY + + AA S +++A
Sbjct: 165 GTMYDQGDGTGKDKTMAVIWYRKAAEQGKVEAQYNLGIMYRDGEGVAKDSAAAFSWFKKA 224
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD + QFN+G Y Q EA+ +A+ V A+Y L + G GV
Sbjct: 225 ADQGDVSAQFNIGAMYADGDGIKQDQAEAIAWFLKAAAQNDVEAEYNLGVMFRDGEGVAK 284
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
N A W+ RAAE Y A YN ++ Y G+G+ +A +W ++A G+
Sbjct: 285 NGHRAVYWFERAAEHRYAGAAYNLAMMYRDGDGVTADAGKAAEWFRKAKHLGY 337
>gi|237745488|ref|ZP_04575968.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229376839|gb|EEO26930.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 350
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 117/227 (51%), Gaps = 20/227 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G +++G V+K++++ L + A RG A G+MY+E + E A Y +A
Sbjct: 128 GILYQNGLVVKKDVERGLQLITRSANRGFARAQNYLGVMYYEGNGVEPNSDRAFEWYGKA 187
Query: 164 AVLGDPAGQFNLGISYL------QE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
AV P ++NLG+ Y Q+ EA+K L +A++ AQY L + RG GV+
Sbjct: 188 AVQNYPDAEYNLGVMYALGKGTRQDFGEALKWLRKAAMHQLPEAQYGLGVMYARGLGVEK 247
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N +++A W+ +AA+ GY++A + Y+ G G+P +A +W RAA+ G+ KAQ
Sbjct: 248 NPEQSAYWFGKAAKQGYLKAQNKMGVLYTEGTGVPRDEAKAFRWFTRAAEKGYAKAQYNL 307
Query: 276 GL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATS 318
G+ G T + KA+ + A G AD K L+ L ATS
Sbjct: 308 GILYENGKGTNADKTKAIGWFRKAAAQGN--ADAQKR--LKTLKATS 350
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAG 195
G+ ++ + + A+S + Q A DP ++ LGI Y E ++L+ +++ G
Sbjct: 96 GVQSYKNGQYQQALSSFEQGASRQDPRSEYALGILYQNGLVVKKDVERGLQLITRSANRG 155
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
RAQ L + + G GV+ N A WY +AA Y A YN + Y+ G+G +
Sbjct: 156 FARAQNYLGVMYYEGNGVEPNSDRAFEWYGKAAVQNYPDAEYNLGVMYALGKGTRQDFGE 215
Query: 256 ARKWMKRAADCGHGKAQLEHGL------GLFTEGEMMKAVVYLELATRAGETAADHVKNV 309
A KW+++AA H + ++GL GL E ++ + A + G A + V
Sbjct: 216 ALKWLRKAAM--HQLPEAQYGLGVMYARGLGVEKNPEQSAYWFGKAAKQGYLKAQNKMGV 273
Query: 310 ILQQLSATSRDRA 322
+ + + RD A
Sbjct: 274 LYTEGTGVPRDEA 286
>gi|189502274|ref|YP_001957991.1| hypothetical protein Aasi_0895 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497715|gb|ACE06262.1| hypothetical protein Aasi_0895 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1493
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G G+ +N +A+ F K A +G A G MY + AI Y++A
Sbjct: 690 GFMYQNGYGLSQNYQEAIKWFQKAADQGLAAAQNSLGFMYQNGYGLSQNYQEAIKWYQKA 749
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG +Y +EA+K +A+ G++ AQ L G+GV+
Sbjct: 750 AEQGHADAQNNLGFTYQNGYGLSQNYQEAIKWYQKAAEQGNMYAQNWLGFMYENGQGVEK 809
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N ++A WY +AA+ GY A YN Y G+G+ ++++A KW ++AA+ G+ AQ
Sbjct: 810 NYRKAIEWYQKAADQGYAYAQYNLGDMYDNGKGVSQNYQEAIKWYQKAAEKGNAAAQC-- 867
Query: 276 GLGLFTEGEMMKAVVY 291
GLG E + A Y
Sbjct: 868 GLGFMYENGLGVAQSY 883
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++HG+G +N +A+ F K A +G A + G MY + AI +++A
Sbjct: 654 GFMYQHGQGGPQNYQEAIKWFQKAADQGLADAQNNLGFMYQNGYGLSQNYQEAIKWFQKA 713
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G A Q +LG Y +EA+K +A+ GH AQ L G G+
Sbjct: 714 ADQGLAAAQNSLGFMYQNGYGLSQNYQEAIKWYQKAAEQGHADAQNNLGFTYQNGYGLSQ 773
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N QEA +WY +AAE G + A Y G+G+ ++R+A +W ++AAD G+ AQ
Sbjct: 774 NYQEAIKWYQKAAEQGNMYAQNWLGFMYENGQGVEKNYRKAIEWYQKAADQGYAYAQYNL 833
Query: 276 GLGLFTEGE-----MMKAVVYLELATRAGETAA 303
G ++ G+ +A+ + + A G AA
Sbjct: 834 G-DMYDNGKGVSQNYQEAIKWYQKAAEKGNAAA 865
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+GV+++ KA + F K A +G+ A G MY + AI +++A
Sbjct: 618 GVAYYNGQGVQQDYVKAKECFAKAADQGNMHAQNWLGFMYQHGQGGPQNYQEAIKWFQKA 677
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG Y +EA+K +A+ G AQ L G G+
Sbjct: 678 ADQGLADAQNNLGFMYQNGYGLSQNYQEAIKWFQKAADQGLAAAQNSLGFMYQNGYGLSQ 737
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 272
N QEA +WY +AAE G+ A N Y G GL ++++A KW ++AA+ G+ AQ
Sbjct: 738 NYQEAIKWYQKAAEQGHADAQNNLGFTYQNGYGLSQNYQEAIKWYQKAAEQGNMYAQNWL 797
Query: 273 ---LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 305
E+G G+ E KA+ + + A G A +
Sbjct: 798 GFMYENGQGV--EKNYRKAIEWYQKAADQGYAYAQY 831
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G G+ +N +A+ + K A +G A + G Y + AI Y++A
Sbjct: 726 GFMYQNGYGLSQNYQEAIKWYQKAAEQGHADAQNNLGFTYQNGYGLSQNYQEAIKWYQKA 785
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G+ Q LG Y + V+ Y+ +I G+ AQY L G+GV
Sbjct: 786 AEQGNMYAQNWLGFMYENGQGVEKNYRKAIEWYQKAADQGYAYAQYNLGDMYDNGKGVSQ 845
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH--GKAQL 273
N QEA +WY +AAE G A Y G G+ S+ A KW ++ A+ + GKA L
Sbjct: 846 NYQEAIKWYQKAAEKGNAAAQCGLGFMYENGLGVAQSYEGAVKWYQKGAEQENMSGKANL 905
Query: 274 EHGLGLFTEGE-MMKAVVYLELATRAGETAADHVKN 308
++ EG+ +MK +V A + + A +KN
Sbjct: 906 GR---MYYEGKGIMKDIVK---ANKLFQEAVSTIKN 935
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 19/177 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+GV +N +A+ + K A +G+ A G MY E A+ Y++
Sbjct: 834 GDMYDNGKGVSQNYQEAIKWYQKAAEKGNAAAQCGLGFMYENGLGVAQSYEGAVKWYQKG 893
Query: 164 AVLGDPAGQFNLGISYLQ---------------EEAVKLLYQASIAGHVRAQYQLALCLH 208
A + +G+ NLG Y + +EAV + + G + Q L
Sbjct: 894 AEQENMSGKANLGRMYYEGKGIMKDIVKANKLFQEAVSTIKNWAEKGDIGPQNLLGWMYQ 953
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G+GV N QEA WY +AA+ ++ A + + Y G+G+ ++A KW ++AAD
Sbjct: 954 YGQGVGQNDQEAVLWYQKAAKQEHIVAQFRLASMYEHGQGVTKDLQEATKWYQKAAD 1010
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 56/224 (25%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGST--------LAMVDAGLMYWEMDKKEAAI 157
+ G ++ GRG+ K+ ++AL + K A +G++ LA+ D G W + K++ +
Sbjct: 544 KLGMMYELGRGIAKDENQALHWYQKAAGQGNSIAQRKVKELAVNDKG---W-VKGKDSNL 599
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQ------------------------------------ 181
Y+++ D + Q NLG++Y
Sbjct: 600 KGYKKSGEQIDASEQVNLGVAYYNGQGVQQDYVKAKECFAKAADQGNMHAQNWLGFMYQH 659
Query: 182 --------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+EA+K +A+ G AQ L G G+ N QEA +W+ +AA+ G
Sbjct: 660 GQGGPQNYQEAIKWFQKAADQGLADAQNNLGFMYQNGYGLSQNYQEAIKWFQKAADQGLA 719
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
A + Y G GL ++++A KW ++AA+ GH AQ G
Sbjct: 720 AAQNSLGFMYQNGYGLSQNYQEAIKWYQKAAEQGHADAQNNLGF 763
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQ 202
++KE +L R+A GD Q LG+ Y ++AV+ +A++ GHV AQ
Sbjct: 450 NEKEDVPTLTRKAQ-QGDVKAQQALGVMYESGNGVTKDVKKAVEWYQKAAMQGHVEAQCN 508
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L GRG+ + +A WY +AA+ GY +A Y + Y G G+ QA W ++
Sbjct: 509 LGGMYELGRGIGKDEHQATYWYQKAADQGYAKAQYKLGMMYELGRGIAKDENQALHWYQK 568
Query: 263 AADCGHGKAQ 272
AA G+ AQ
Sbjct: 569 AAGQGNSIAQ 578
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 54/226 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---------------WEM-- 150
G ++ GRG+ K+ +A + K A +G A G+MY W
Sbjct: 510 GGMYELGRGIGKDEHQATYWYQKAADQGYAKAQYKLGMMYELGRGIAKDENQALHWYQKA 569
Query: 151 ------------------DK-----KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKL 187
DK K++ + Y+++ D + Q NLG++Y + V+
Sbjct: 570 AGQGNSIAQRKVKELAVNDKGWVKGKDSNLKGYKKSGEQIDASEQVNLGVAYYNGQGVQQ 629
Query: 188 LY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
Y +A+ G++ AQ L G+G N QEA +W+ +AA+ G A N
Sbjct: 630 DYVKAKECFAKAADQGNMHAQNWLGFMYQHGQGGPQNYQEAIKWFQKAADQGLADAQNNL 689
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 279
Y G GL ++++A KW ++AAD G AQ ++G GL
Sbjct: 690 GFMYQNGYGLSQNYQEAIKWFQKAADQGLAAAQNSLGFMYQNGYGL 735
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
++E V L + + G V+AQ L + G GV ++++A WY +AA G+V A N
Sbjct: 451 EKEDVPTLTRKAQQGDVKAQQALGVMYESGNGVTKDVKKAVEWYQKAAMQGHVEAQCNLG 510
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y G G+ QA W ++AAD G+ KAQ + G+
Sbjct: 511 GMYELGRGIGKDEHQATYWYQKAADQGYAKAQYKLGM 547
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 102 MVLLRW-GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAA 156
M W G +++G+GV KN KA++ + K A +G A + G MY + A
Sbjct: 791 MYAQNWLGFMYENGQGVEKNYRKAIEWYQKAADQGYAYAQYNLGDMYDNGKGVSQNYQEA 850
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLH 208
I Y++AA G+ A Q LG Y E AVK + + ++ + L +
Sbjct: 851 IKWYQKAAEKGNAAAQCGLGFMYENGLGVAQSYEGAVKWYQKGAEQENMSGKANLGRMYY 910
Query: 209 RGRGVDFNLQEAARWYLRA-------AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261
G+G+ ++ +A + + A AE G + Y +G+G+ + ++A W +
Sbjct: 911 EGKGIMKDIVKANKLFQEAVSTIKNWAEKGDIGPQNLLGWMYQYGQGVGQNDQEAVLWYQ 970
Query: 262 RAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAADH 305
+AA H AQ EHG G+ + L+ AT+ + AAD
Sbjct: 971 KAAKQEHIVAQFRLASMYEHGQGVTKD---------LQEATKWYQKAADQ 1011
>gi|221068658|ref|ZP_03544763.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220713681|gb|EED69049.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 425
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 20/214 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R++ G+GV ++L +A+ + + A +G A D G++Y +D+ +A +S YR+
Sbjct: 148 GSRYRFGKGVNQDLAQAVHWYRQSAEQGYAPAQSDLGVLYANGRGVTLDEAQA-VSWYRK 206
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD Q NLG+ Y + +AV+ +++ +G QY L + L GRGV
Sbjct: 207 AADQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 266
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ + A +W+ +AAE G+ A YN + Y+ G +P +A +W++++A G+ AQ
Sbjct: 267 EDGRAALQWFEQAAEKGHADAQYNAGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSS 326
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAGETAA 303
G L+ G+ + +A + + A + G T A
Sbjct: 327 LGF-LYANGQGVAQDAGQAARWFDRAAKQGYTLA 359
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +AQY L G+GV+ +L +A WY ++AE GY A + + Y+ G G+ L
Sbjct: 139 GDAKAQYLLGSRYRFGKGVNQDLAQAVHWYRQSAEQGYAPAQSDLGVLYANGRGVTLDEA 198
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNV 309
QA W ++AAD G G AQ GL ++ EG + +AV + E + ++GE A + V
Sbjct: 199 QAVSWYRKAADQGDGIAQNNLGL-MYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGV 257
Query: 310 IL 311
+L
Sbjct: 258 ML 259
>gi|418530603|ref|ZP_13096526.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
gi|371452322|gb|EHN65351.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
Length = 416
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 114/214 (53%), Gaps = 20/214 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R++ G+GV ++L +A+ + + A +G A D G++Y +D+ +A ++ YR+
Sbjct: 139 GSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYANGRGVTLDEAQA-VNWYRK 197
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD Q NLG+ Y + +AV+ +++ +G QY L + L GRGV
Sbjct: 198 AAEQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 257
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ + A +W+ +AAE G+ A YNT + Y+ G +P +A +W++++A G+ AQ
Sbjct: 258 EDGRAALQWFEQAAEKGHADAQYNTGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSS 317
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAGETAA 303
G L+ G+ + +A + + A + G T A
Sbjct: 318 LGF-LYANGQGVPQDAGQAARWFDRAAKQGYTLA 350
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
QY L G+GV+ +L +A WY ++A+ GY A + + Y+ G G+ L QA W
Sbjct: 135 QYLLGSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYANGRGVTLDEAQAVNW 194
Query: 260 MKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQL 314
++AA+ G G AQ GL ++ EG + +AV + E + ++GE A + V+L
Sbjct: 195 YRKAAEQGDGIAQNNLGL-MYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSG 253
Query: 315 SATSRD-RAML 324
D RA L
Sbjct: 254 RGVKEDGRAAL 264
>gi|153873300|ref|ZP_02001926.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
gi|152070234|gb|EDN68074.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
Length = 566
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 125 LDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISY 179
++S + A G A G +Y+ D KEAA YR+ A G Q NLGI Y
Sbjct: 27 IESLQQAAEEGDIAAQFQLGTIYYTGQDVPHDLKEAA-KWYRKVAEQGFATAQHNLGIMY 85
Query: 180 LQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
+ E V ++ A+ G R+Q L +G+G+ N +EA +WY +AAE G
Sbjct: 86 SRGEGVPQDHEIAFGWYRKAAEQGDSRSQNNLGNLYRKGQGIPKNDKEAVKWYRKAAEQG 145
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 288
Y A YN + Y+ GEG+ QA KW ++AAD G+ +AQ E LG F E + A
Sbjct: 146 YAVAQYNLGVAYNRGEGIFKDKNQAIKWYRKAADQGYVEAQRE--LGYFQETPVTVA 200
>gi|90416741|ref|ZP_01224671.1| hypothetical protein GB2207_03799 [gamma proteobacterium HTCC2207]
gi|90331494|gb|EAS46730.1| hypothetical protein GB2207_03799 [marine gamma proteobacterium
HTCC2207]
Length = 322
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + G GV ++ +A+ F K A +G A G MY + + A+ +++A
Sbjct: 76 GYMYADGLGVPESGTEAVKWFKKAADQGDADAQYTLGYMYADGLGVPESGTEAVKWFKKA 135
Query: 164 AVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G A Q+NLG Y EAVK +A+ G VRAQY L L G GV
Sbjct: 136 ADQGYAAAQYNLGNMYRTGEGVPESAAEAVKWYRKAAGQGDVRAQYNLGLMYADGDGVPE 195
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 272
N EA +WY +AAE G A YN Y+ G G+P + +A KW ++AA G AQ
Sbjct: 196 NGAEAVKWYRKAAEQGDADAQYNLGYMYADGLGVPENDAEAVKWFRKAAAQGRADAQSKL 255
Query: 273 -LEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
+G G ++A V+ +A G+T A
Sbjct: 256 GFMYGTGKGVPENSIRAYVWFSMAKTQGDTGA 287
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + G GV +N +A+ F K A +G A G MY + + A+ +++A
Sbjct: 40 GVMYADGDGVPENGTEAVKWFKKAADQGDADAQYTLGYMYADGLGVPESGTEAVKWFKKA 99
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD Q+ LG Y EAVK +A+ G+ AQY L G GV
Sbjct: 100 ADQGDADAQYTLGYMYADGLGVPESGTEAVKWFKKAADQGYAAAQYNLGNMYRTGEGVPE 159
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA +WY +AA G VRA YN L Y+ G+G+P + +A KW ++AA+ G AQ
Sbjct: 160 SAAEAVKWYRKAAGQGDVRAQYNLGLMYADGDGVPENGAEAVKWYRKAAEQGDADAQYNL 219
Query: 276 GLGLFTEG 283
G ++ +G
Sbjct: 220 GY-MYADG 226
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQY L + G GV N EA +W+ +AA+ G A Y Y+ G G+P S
Sbjct: 31 GVATAQYNLGVMYADGDGVPENGTEAVKWFKKAADQGDADAQYTLGYMYADGLGVPESGT 90
Query: 255 QARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLELATRAGETAADH 305
+A KW K+AAD G AQ GLG+ G +AV + + A G AA +
Sbjct: 91 EAVKWFKKAADQGDADAQYTLGYMYADGLGVPESG--TEAVKWFKKAADQGYAAAQY 145
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 82/190 (43%), Gaps = 19/190 (10%)
Query: 74 ASFTLPQLRAASL-VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALD 126
A +TL + A L V +S +A++ ++A G ++ G GV ++ +A+
Sbjct: 107 AQYTLGYMYADGLGVPESGTEAVKWFKKAADQGYAAAQYNLGNMYRTGEGVPESAAEAVK 166
Query: 127 SFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQ- 181
+ K A +G A + GLMY + D A+ YR+AA GD Q+NLG Y
Sbjct: 167 WYRKAAGQGDVRAQYNLGLMYADGDGVPENGAEAVKWYRKAAEQGDADAQYNLGYMYADG 226
Query: 182 -------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
EAVK +A+ G AQ +L G+GV N A W+ A G
Sbjct: 227 LGVPENDAEAVKWFRKAAAQGRADAQSKLGFMYGTGKGVPENSIRAYVWFSMAKTQGDTG 286
Query: 235 AMYNTSLCYS 244
A N + S
Sbjct: 287 AATNIDILKS 296
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFT 281
AE G A YN + Y+ G+G+P + +A KW K+AAD G AQ GLG+
Sbjct: 28 AEQGVATAQYNLGVMYADGDGVPENGTEAVKWFKKAADQGDADAQYTLGYMYADGLGVPE 87
Query: 282 EGEMMKAVVYLELATRAGETAADHV 306
G +AV + + A G+ A +
Sbjct: 88 SG--TEAVKWFKKAADQGDADAQYT 110
>gi|152997375|ref|YP_001342210.1| Sel1 domain-containing protein [Marinomonas sp. MWYL1]
gi|150838299|gb|ABR72275.1| Sel1 domain protein repeat-containing protein [Marinomonas sp.
MWYL1]
Length = 685
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
F+ G GV+++ +KA +LK A G++ A V+ G +Y+ D EA Y +AA
Sbjct: 168 FEEGLGVQQDYEKAAYWYLKAALNGNSYAQVNLGDLYYSGLGVAQDFTEAE-KWYLKAAE 226
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNL 217
+ ++NLG Y E V Y+ A+ + AQ LA + G+G++ +
Sbjct: 227 DDNGEAEYNLGYMYEMGEGVAQDYEVAANWYRKAAEQDYTNAQNALAYLYYSGQGIEKSY 286
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
QE+ WYLR+AE G A YN Y G G+P + +A W ++AAD GH KAQ L
Sbjct: 287 QESVNWYLRSAELGNNSAQYNLGYFYEEGIGIPQNFPEAANWYRKAADQGHIKAQTN--L 344
Query: 278 GLFTEGEMMKAVVYLELAT 296
G F + + YLE A
Sbjct: 345 GYFFDAGLGVKQSYLEAAN 363
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 118/240 (49%), Gaps = 25/240 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G+G+ K+ ++++ +L+ A G+ A + G Y E + EAA + YR+AA
Sbjct: 276 YYSGQGIEKSYQESVNWYLRSAELGNNSAQYNLGYFYEEGIGIPQNFPEAA-NWYRKAAD 334
Query: 166 LGDPAGQFNLGI----------SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
G Q NLG SYL EA +A+ G+ RAQ L G GV+
Sbjct: 335 QGHIKAQTNLGYFFDAGLGVKQSYL--EAANWYRKAADQGYPRAQTNLGYLFDEGLGVEQ 392
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL--SHRQARKWMKRAADCGHGKAQL 273
N EAA WY +AA+ GY RA T+L Y F EGL + S+ +A W ++A+D G+ +AQ
Sbjct: 393 NYLEAANWYRKAADQGYPRAQ--TNLGYLFDEGLGVEQSYLEAANWYRKASDQGYSRAQT 450
Query: 274 EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 333
G LF EG ++ YLE A AAD ++ L A + + DS RA+
Sbjct: 451 NLGY-LFDEGLGVEQ-NYLEAANWY-RKAADQGYSIAQNNLGALYQAGYGVKQDSQRAIE 507
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 15/189 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV ++ +A +LK A + A + G MY EM + E A + YR+
Sbjct: 201 GDLYYSGLGVAQDFTEAEKWYLKAAEDDNGEAEYNLGYMY-EMGEGVAQDYEVAANWYRK 259
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVR--------AQYQLALCLHRGRGVD 214
AA Q L Y + ++ YQ S+ ++R AQY L G G+
Sbjct: 260 AAEQDYTNAQNALAYLYYSGQGIEKSYQESVNWYLRSAELGNNSAQYNLGYFYEEGIGIP 319
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N EAA WY +AA+ G+++A N + G G+ S+ +A W ++AAD G+ +AQ
Sbjct: 320 QNFPEAANWYRKAADQGHIKAQTNLGYFFDAGLGVKQSYLEAANWYRKAADQGYPRAQTN 379
Query: 275 HGLGLFTEG 283
G LF EG
Sbjct: 380 LGY-LFDEG 387
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G F G GV +N +A + + K A +G ++A + G +Y + AI LY+ A
Sbjct: 453 GYLFDEGLGVEQNYLEAANWYRKAADQGYSIAQNNLGALYQAGYGVKQDSQRAIELYKMA 512
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G GQ+NL G+ EA K +++ G + AQ +L L +RG GVD
Sbjct: 513 AEQGLSDGQYNLAYLLNEGIGVDKNPVEAEKWFRKSAEQGDIDAQVELGLLFYRGSGVDK 572
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N QEA +W+ +AA+ G A N Y G G+ + A +W ++A + AQ
Sbjct: 573 NYQEAWKWFHQAAKQGSAAAQNNIGAMYQNGYGVTQDYSLAAEWYQKAVNQDFAGAQ 629
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G F G GV ++ +A + + K + +G + A + G ++ E + EAA + YR+
Sbjct: 417 GYLFDEGLGVEQSYLEAANWYRKASDQGYSRAQTNLGYLFDEGLGVEQNYLEAA-NWYRK 475
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y + A++L A+ G QY LA L+ G GVD
Sbjct: 476 AADQGYSIAQNNLGALYQAGYGVKQDSQRAIELYKMAAEQGLSDGQYNLAYLLNEGIGVD 535
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N EA +W+ ++AE G + A L + G G+ ++++A KW +AA G AQ
Sbjct: 536 KNPVEAEKWFRKSAEQGDIDAQVELGLLFYRGSGVDKNYQEAWKWFHQAAKQGSAAAQ 593
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
F +G KN+DKA ++ AA+ S LA L +W D E A + Y A+V
Sbjct: 96 FYQAKGGDKNVDKAF-HYMTLAAK-SGLAKAQNYLGWWYEDGTEVAQN-YATASVW---- 148
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
YL+ A+ + AQ LA G GV + ++AA WYL+AA
Sbjct: 149 --------YLK---------AANQDYDYAQNNLAYLFEEGLGVQQDYEKAAYWYLKAALN 191
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
G A N Y G G+ +A KW +AA+ +G+A E+ LG E
Sbjct: 192 GNSYAQVNLGDLYYSGLGVAQDFTEAEKWYLKAAEDDNGEA--EYNLGYMYE 241
>gi|82701239|ref|YP_410805.1| Sel1 repeat-containing protein [Nitrosospira multiformis ATCC
25196]
gi|82409304|gb|ABB73413.1| Sel1-like repeat [Nitrosospira multiformis ATCC 25196]
Length = 489
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGST-----LAMVDAGLMYWEMDKKEAAISLYRQ 162
G F G GV ++ +A + + A +G L + +A + D EAA + YR+
Sbjct: 246 GMMFATGEGVTQDYRQAASLYRQAADQGYARAQFKLGVANAKGLGIPEDAYEAA-AWYRK 304
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G QFNLG+ Y + +AV QA+ G AQY L + GRG++
Sbjct: 305 AAEQGYAPAQFNLGVMYATGKGVIRDERQAVSWYRQAAEQGDPDAQYNLGVRYDTGRGIE 364
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AAE GY RA Y+ + Y G+G+P + QA W +AA+ GH AQ
Sbjct: 365 KDPQQAVAWYRKAAEQGYARAQYSVGVKYDSGQGVPQDYAQALAWYLKAAEQGHAGAQTN 424
Query: 275 HGLGLFTEGEMMK 287
G+ L+ G +K
Sbjct: 425 LGV-LYYNGNGVK 436
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 111/238 (46%), Gaps = 18/238 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + G+GV ++ +A+ + + A G +A + G+MY + E A+S Y +A
Sbjct: 102 GYMYLKGQGVPQDYQQAMFWYFRAADSGYAVAQYNLGVMYAKGQGVEKDYRHALSWYLKA 161
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q +G YL+ +AV +A+ G+ AQY L + +GRGV
Sbjct: 162 AEQGHAPAQAIMGFMYLKGQGVEQDDHQAVSWYRKAAEQGYGEAQYALGVLYAKGRGVAQ 221
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ QEAA WY +AAE G A +N + ++ GEG+ +RQA ++AAD G+ +AQ +
Sbjct: 222 SNQEAASWYRKAAEQGNTDAQFNLGMMFATGEGVTQDYRQAASLYRQAADQGYARAQFKL 281
Query: 276 GL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
G+ GL + +A + A G A V+ RD V SW
Sbjct: 282 GVANAKGLGIPEDAYEAAAWYRKAAEQGYAPAQFNLGVMYATGKGVIRDERQAV--SW 337
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 13/179 (7%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQ 172
+ K+ KA+ SF K A G+ A + G++Y E A YR+AA GD Q
Sbjct: 39 LSKDYTKAMQSFRKAANAGNADAQFNLGVLYSRGRGVPQDHEQAAKWYRRAAEQGDAPAQ 98
Query: 173 FNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
LG YL+ + V YQ A+ +G+ AQY L + +G+GV+ + + A WY
Sbjct: 99 SMLGYMYLKGQGVPQDYQQAMFWYFRAADSGYAVAQYNLGVMYAKGQGVEKDYRHALSWY 158
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
L+AAE G+ A Y G+G+ QA W ++AA+ G+G+AQ G+ L+ +G
Sbjct: 159 LKAAEQGHAPAQAIMGFMYLKGQGVEQDDHQAVSWYRKAAEQGYGEAQYALGV-LYAKG 216
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 86 LVCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA 139
++ K + A++ R+A G + GRGV ++ ++A + + A +G A
Sbjct: 38 VLSKDYTKAMQSFRKAANAGNADAQFNLGVLYSRGRGVPQDHEQAAKWYRRAAEQGDAPA 97
Query: 140 MVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY----- 189
G MY + D ++A +R AA G Q+NLG+ Y + + V+ Y
Sbjct: 98 QSMLGYMYLKGQGVPQDYQQAMFWYFR-AADSGYAVAQYNLGVMYAKGQGVEKDYRHALS 156
Query: 190 ---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
+A+ GH AQ + +G+GV+ + +A WY +AAE GY A Y + Y+ G
Sbjct: 157 WYLKAAEQGHAPAQAIMGFMYLKGQGVEQDDHQAVSWYRKAAEQGYGEAQYALGVLYAKG 216
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
G+ S+++A W ++AA+ G+ AQ G+ +F GE
Sbjct: 217 RGVAQSNQEAASWYRKAAEQGNTDAQFNLGM-MFATGE 253
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCL 207
A+ +R+AA G+ QFNLG+ Y E+A K +A+ G AQ L
Sbjct: 46 AMQSFRKAANAGNADAQFNLGVLYSRGRGVPQDHEQAAKWYRRAAEQGDAPAQSMLGYMY 105
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G+GV + Q+A WY RAA+ GY A YN + Y+ G+G+ +R A W +AA+ G
Sbjct: 106 LKGQGVPQDYQQAMFWYFRAADSGYAVAQYNLGVMYAKGQGVEKDYRHALSWYLKAAEQG 165
Query: 268 HGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
H AQ G G E + +AV + A G A + V+
Sbjct: 166 HAPAQAIMGFMYLKGQGVEQDDHQAVSWYRKAAEQGYGEAQYALGVL 212
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 170 AGQFNLGISYL----QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
AG F G+ ++ +A++ +A+ AG+ AQ+ L + RGRGV + ++AA+WY
Sbjct: 28 AGDFEDGMKFVLSKDYTKAMQSFRKAANAGNADAQFNLGVLYSRGRGVPQDHEQAAKWYR 87
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
RAAE G A Y G+G+P ++QA W RAAD G+ AQ G+ ++ +G+
Sbjct: 88 RAAEQGDAPAQSMLGYMYLKGQGVPQDYQQAMFWYFRAADSGYAVAQYNLGV-MYAKGQ 145
>gi|189501781|ref|YP_001957498.1| hypothetical protein Aasi_0340 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497222|gb|ACE05769.1| hypothetical protein Aasi_0340 [Candidatus Amoebophilus asiaticus
5a2]
Length = 2413
Score = 91.3 bits (225), Expect = 6e-16, Method: Composition-based stats.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 17/226 (7%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-EAAI 157
R A + G + +G GV K+ ++A+ F K A +G+ A + G+MY +++ + AI
Sbjct: 2193 RHADAQFKLGVMYHNGEGVAKDDNQAIKWFQKAAEQGNADAQFNLGVMYEKVEGNYKKAI 2252
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAV------KLLYQASIAG--HVRAQYQLALCLHR 209
+++AA G QF LG+ Y E V + + AG +V+AQ++L + +
Sbjct: 2253 KWFQKAAEQGHADAQFKLGVMYHNGEGVAKDDNQAVFWYRKAAGQRNVKAQFKLGVMYYH 2312
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
G+GV + ++A +WY AAE G A +N + Y EG ++++A +W + AA+ G+
Sbjct: 2313 GQGVGQDYKKAIKWYQIAAEQGNADAQFNLGVMYEKVEG---NYKKAIEWYRIAAEQGNA 2369
Query: 270 KAQLEHGLGLF---TEGEMMKAVVYLELATRAGETAADHVKNVILQ 312
AQ LG+ EG KA+ + + A G A N +++
Sbjct: 2370 DAQFN--LGVIYEKVEGNYKKAIEWFQKAAEQGNLKAQDNLNRLIK 2413
Score = 84.7 bits (208), Expect = 6e-14, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEE-----AVKLLYQASIAGHVRAQYQLALCLHRG 210
AI +++AA G+ QFNLG+ Y + E A+K +A+ GH AQ++L + H G
Sbjct: 2218 AIKWFQKAAEQGNADAQFNLGVMYEKVEGNYKKAIKWFQKAAEQGHADAQFKLGVMYHNG 2277
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GV + +A WY +AA V+A + + Y G+G+ +++A KW + AA+ G+
Sbjct: 2278 EGVAKDDNQAVFWYRKAAGQRNVKAQFKLGVMYYHGQGVGQDYKKAIKWYQIAAEQGNAD 2337
Query: 271 AQLEHGLGL-FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 319
AQ G+ EG KA+ + +A G A VI +++ +
Sbjct: 2338 AQFNLGVMYEKVEGNYKKAIEWYRIAAEQGNADAQFNLGVIYEKVEGNYK 2387
>gi|425744134|ref|ZP_18862195.1| Sel1 repeat protein [Acinetobacter baumannii WC-323]
gi|425491935|gb|EKU58212.1| Sel1 repeat protein [Acinetobacter baumannii WC-323]
Length = 301
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 24/229 (10%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--- 148
NDA EA+ +L + G G + + KAL+ F K A GS+ AM+ GL+Y
Sbjct: 52 NDA-----EAIFVL--ASMYATGEGEKFDQKKALELFEKSAQLGSSNAMLQLGLIYQYGN 104
Query: 149 EMDKKE--AAISLYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVR 198
E KK+ A+ + + A G+P+ N+G++Y + +VK +++ +G ++
Sbjct: 105 EAVKKDDQKALMWFEEGAKKGNPSAIHNVGLAYYKGLSVKQDRAKAFTYFIRSAESGLIQ 164
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
+Q +A L+ G GV+ +++ + +W L+AAE G + + N L Y GEG+ QA
Sbjct: 165 SQTVVAAQLYGGDGVEKDIKASFKWILKAAEQGDLESQNNVGLAYERGEGVEQDPLQALV 224
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAA 303
W KRAAD GH AQ L + M + ++ Y E+A R G +A
Sbjct: 225 WFKRAADHGHSLAQYNTALKYYNGAGMKQNLDESIRYAEMAVRNGNPSA 273
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 84/214 (39%), Gaps = 49/214 (22%)
Query: 98 LREAMVLLRWGKRFKHG-RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MD 151
L + +L+ G +++G V+K+ KAL F +GA +G+ A+ + GL Y++ D
Sbjct: 87 LGSSNAMLQLGLIYQYGNEAVKKDDQKALMWFEEGAKKGNPSAIHNVGLAYYKGLSVKQD 146
Query: 152 KKEAAISLYR-----------------------------------QAAVLGDPAGQFNLG 176
+ +A R +AA GD Q N+G
Sbjct: 147 RAKAFTYFIRSAESGLIQSQTVVAAQLYGGDGVEKDIKASFKWILKAAEQGDLESQNNVG 206
Query: 177 ISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
++Y + E V+ +A+ GH AQY AL + G G+ NL E+ R+ A
Sbjct: 207 LAYERGEGVEQDPLQALVWFKRAADHGHSLAQYNTALKYYNGAGMKQNLDESIRYAEMAV 266
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
G A Y+ L S +A W +
Sbjct: 267 RNGNPSAKALLYDIYAESSSLKYSPEKANYWKSK 300
>gi|297621489|ref|YP_003709626.1| hypothetical protein wcw_1268 [Waddlia chondrophila WSU 86-1044]
gi|297376790|gb|ADI38620.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
gi|337293689|emb|CCB91676.1| uncharacterized protein ybeQ [Waddlia chondrophila 2032/99]
Length = 625
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 92/181 (50%), Gaps = 12/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G + HG G+ KN KA + F + A +LA + GLMY W ++K +A Y ++
Sbjct: 82 GNMYLHGIGLEKNDTKAFEHFSQAAKEKDSLAEYNLGLMYENGWGVEKNLSSAFEYYERS 141
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+P GQ NLG Y ++A + +A+ G V AQ L G+GVD
Sbjct: 142 ANAGNPYGQINLGRFYENGISVPNNDQKAFQWYKKAADQGMVSAQNSLGRMYQLGKGVDQ 201
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A WYL+AAE G A +N L Y G+G+ +A+KW ++AA+ + AQ
Sbjct: 202 DYGKAKEWYLKAAEEGNAFAQFNLGLLYEEGKGVQKDDLEAKKWYEKAAEQENPLAQFRL 261
Query: 276 G 276
G
Sbjct: 262 G 262
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 18/194 (9%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISL 159
L G+ ++ G+GV K+ KA + + A G A ++ GL+Y + ++A
Sbjct: 366 LYNLGRVYEFGKGVPKDPSKAYTYYRRAAELGYAPAQLNLGLLYIKGVGVSQSFKSAADW 425
Query: 160 YRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+++AA G+ + Q NLG+ Y Q +EAV +A+ + A Y +A G+
Sbjct: 426 FQKAAEKGNSSAQVNLGLLYSQGKGVLQSDDEAVYWYKKAAEKDNPEAFYLMAAMYESGK 485
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
G++ +L++A +Y +AAEGG A L Y G GLP + +A W +++A+ G
Sbjct: 486 GLEKDLKKAIEYYQKAAEGGSGIAQNKLGLLYEIGSGLPQNIGEAVNWYRKSAESGFADG 545
Query: 272 Q------LEHGLGL 279
Q E G+G+
Sbjct: 546 QNNLGRMYEQGIGM 559
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 95/227 (41%), Gaps = 55/227 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ ++ G+GV ++ KA + +LK A G+ A + GL+Y E D EA Y +
Sbjct: 190 GRMYQLGKGVDQDYGKAKEWYLKAAEEGNAFAQFNLGLLYEEGKGVQKDDLEAK-KWYEK 248
Query: 163 AAVLGDPAGQFNLGISYLQE---------------------------------------- 182
AA +P QF LG +L E
Sbjct: 249 AAEQENPLAQFRLG--WLNEKPEGFSPNDSAAYEWYLKAARQGVLQAQNNVGRMLKKGLG 306
Query: 183 ------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
EA K A+ G+ AQ L + G GV + + A WY +AAE R +
Sbjct: 307 VEENDLEAAKWFRAAAEKGNSAAQNNLGVLYEEGEGVPKDFKLALFWYSQAAENNDSRGL 366
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
YN Y FG+G+P +A + +RAA+ G+ AQL GL L+ +G
Sbjct: 367 YNLGRVYEFGKGVPKDPSKAYTYYRRAAELGYAPAQLNLGL-LYIKG 412
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 103/243 (42%), Gaps = 22/243 (9%)
Query: 55 STEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG 114
+ EG+ FA +L + L A K W + + R G +
Sbjct: 214 AEEGNAFAQFNLGLLYEEGKGVQKDDLEA-----KKWYEKAAEQENPLAQFRLGWLNEKP 268
Query: 115 RGVRKNLDKALDSFLKGAARGSTLA------MVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
G N A + +LK A +G A M+ GL E D + A +R AA G+
Sbjct: 269 EGFSPNDSAAYEWYLKAARQGVLQAQNNVGRMLKKGLGVEENDLE--AAKWFRAAAEKGN 326
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
A Q NLG+ Y + E V + QA+ R Y L G+GV + +A
Sbjct: 327 SAAQNNLGVLYEEGEGVPKDFKLALFWYSQAAENNDSRGLYNLGRVYEFGKGVPKDPSKA 386
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+Y RAAE GY A N L Y G G+ S + A W ++AA+ G+ AQ+ GL L+
Sbjct: 387 YTYYRRAAELGYAPAQLNLGLLYIKGVGVSQSFKSAADWFQKAAEKGNSSAQVNLGL-LY 445
Query: 281 TEG 283
++G
Sbjct: 446 SQG 448
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
L G + G GV ++ A D F K A +G++ A V+ GL+Y + + + A+ Y
Sbjct: 403 LNLGLLYIKGVGVSQSFKSAADWFQKAAEKGNSSAQVNLGLLYSQGKGVLQSDDEAVYWY 462
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA +P + + Y ++A++ +A+ G AQ +L L G G
Sbjct: 463 KKAAEKDNPEAFYLMAAMYESGKGLEKDLKKAIEYYQKAAEGGSGIAQNKLGLLYEIGSG 522
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA- 271
+ N+ EA WY ++AE G+ N Y G G+ ++ A W ++AA G +
Sbjct: 523 LPQNIGEAVNWYRKSAESGFADGQNNLGRMYEQGIGMKVNFEAAAFWYRQAAGLGSAEGM 582
Query: 272 -----QLEHGLGLFTEGEMMKAV-VYLELATRAGETA 302
E GLG+ ++ +AV +Y + A + E A
Sbjct: 583 YNLGRMYEDGLGVGK--DIREAVNLYRQAAEKGNEDA 617
>gi|169826234|ref|YP_001696392.1| suppressor of lin-12-like protein (Sel-1L) [Lysinibacillus
sphaericus C3-41]
gi|168990722|gb|ACA38262.1| Suppressor of lin-12-like protein (Sel-1L) [Lysinibacillus
sphaericus C3-41]
Length = 619
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK--EAAISLYRQ 162
G F G+G+ +N +A + A G+ A + G++Y + M + EAA Y
Sbjct: 202 GVLFHLGQGIEQNYTEAAHHYQIAADLGNADAQYNLGVLYNQGLGMSQNFLEAA-KWYTL 260
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ + Q NLG Y V+ Y A++AG AQY L +GRG+
Sbjct: 261 AADQGNTSAQNNLGFLYHNGTGVEQSYVEASTYFEMAALAGDASAQYNLGYMHLKGRGIP 320
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N EAA+W+ AA ++ A + ++ Y+ G+G+P+ H +A KW K AA GH AQ
Sbjct: 321 QNFTEAAKWFHMAALQDHMNAEFQIAMLYNTGQGIPMDHLEALKWFKLAAHKGHLHAQFY 380
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAA 303
GL E +M+ A +L LA G +A
Sbjct: 381 LGLLYEKEQDMVLAEKWLLLAAEKGHISA 409
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQ 202
D + A + AA GD + Q+NLG Y Q VK Y +A+ A Y
Sbjct: 141 DAYKHAAEWFEIAAQNGDASAQYNLGALYNQGRGVKKDYALAKMWYERAADQNDPNAHYS 200
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L + H G+G++ N EAA Y AA+ G A YN + Y+ G G+ + +A KW
Sbjct: 201 LGVLFHLGQGIEQNYTEAAHHYQIAADLGNADAQYNLGVLYNQGLGMSQNFLEAAKWYTL 260
Query: 263 AADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 305
AAD G+ AQ G G E ++A Y E+A AG+ +A +
Sbjct: 261 AADQGNTSAQNNLGFLYHNGTGVEQSYVEASTYFEMAALAGDASAQY 307
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 13/175 (7%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGI 177
DKAL A +G A + GL+ D A+ +R A ++ LG+
Sbjct: 425 DKALPYLKAAAEKGYVDAQYELGLLLTAGDGVPVNYPEAVQWWRAATDQSHIQAEYQLGL 484
Query: 178 SYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y Q EEA + A+I GH AQYQL +G+GV + EAA+W +AA
Sbjct: 485 VYEQGLGVSIDLEEARRCYRLAAIQGHAGAQYQLGNLFDKGKGVTQDYTEAAKWIEQAAA 544
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+++A Y + + G+G+P +A + + AA+ GH KAQ + GL L+ +G+
Sbjct: 545 QEHIKAQYQLAQMHIHGQGVPKDFAKAAQLYRLAANQGHQKAQFQLGL-LYKKGQ 598
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----AAVL 166
+ G+G+ + +AL F A +G A GL+Y +KE + L + AA
Sbjct: 349 YNTGQGIPMDHLEALKWFKLAAHKGHLHAQFYLGLLY----EKEQDMVLAEKWLLLAAEK 404
Query: 167 GDPAGQFNLGISYLQE-----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
G + F LG Y+ + +A+ L A+ G+V AQY+L L L G GV N EA
Sbjct: 405 GHISAGFELGRLYVYQLHQPDKALPYLKAAAEKGYVDAQYELGLLLTAGDGVPVNYPEAV 464
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
+W+ A + +++A Y L Y G G+ + +AR+ + AA GH AQ + G LF
Sbjct: 465 QWWRAATDQSHIQAEYQLGLVYEQGLGVSIDLEEARRCYRLAAIQGHAGAQYQLG-NLFD 523
Query: 282 EGEMMKAVV--YLELATRAGETAA-DHVK 307
+G K V Y E A + AA +H+K
Sbjct: 524 KG---KGVTQDYTEAAKWIEQAAAQEHIK 549
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 25/199 (12%)
Query: 78 LPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST 137
LP L+AA+ K + DA L G G GV N +A+ + +
Sbjct: 428 LPYLKAAA--EKGYVDAQYEL---------GLLLTAGDGVPVNYPEAVQWWRAATDQSHI 476
Query: 138 LAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLG--------ISYLQEEA 184
A GL+Y + +D +EA YR AA+ G Q+ LG ++ EA
Sbjct: 477 QAEYQLGLVYEQGLGVSIDLEEAR-RCYRLAAIQGHAGAQYQLGNLFDKGKGVTQDYTEA 535
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
K + QA+ H++AQYQLA G+GV + +AA+ Y AA G+ +A + L Y
Sbjct: 536 AKWIEQAAAQEHIKAQYQLAQMHIHGQGVPKDFAKAAQLYRLAANQGHQKAQFQLGLLYK 595
Query: 245 FGEGLPLSHRQARKWMKRA 263
G+G+ +++A KW+K++
Sbjct: 596 KGQGVAQDYQEATKWLKKS 614
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG- 276
+ AA W+ AA+ G A YN Y+ G G+ + A+ W +RAAD A G
Sbjct: 144 KHAAEWFEIAAQNGDASAQYNLGALYNQGRGVKKDYALAKMWYERAADQNDPNAHYSLGV 203
Query: 277 ---LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
LG E +A + ++A G A + V+ Q
Sbjct: 204 LFHLGQGIEQNYTEAAHHYQIAADLGNADAQYNLGVLYNQ 243
>gi|384500587|gb|EIE91078.1| hypothetical protein RO3G_15789 [Rhizopus delemar RA 99-880]
Length = 623
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 109/243 (44%), Gaps = 18/243 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
E++ G ++ G GV KN KA+ + A +G+ A G Y + DK
Sbjct: 210 ESVAAYNIGYCYEDGIGVVKNPGKAVSWYKLAADQGNAFAQNSLGYCYEDGIGIKQDKAM 269
Query: 155 AAISLYRQAAVLGDPAGQFNLGISY-----LQEEAVKLLY---QASIAGHVRAQYQLALC 206
AA YR++A G Q NLG Y + ++ V+ Y QA+ GH RAQ+ L C
Sbjct: 270 AAF-WYRRSAEQGYIWAQCNLGYCYQNGIGIDKDVVQGAYWYSQAATQGHARAQHNLGFC 328
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G GV +L+ A WY +AAE G + A ++ CY G G+ R++ W KR+A+
Sbjct: 329 YQNGIGVTKDLKMAIFWYKKAAEQGNIFAYHSLGYCYQNGLGVTADQRESFFWYKRSAES 388
Query: 267 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
H AQL G G+ E +AV + L+ A + ++ +D
Sbjct: 389 NHAPAQLSLGFCYRNGIGVEKNEKEAVKWFRLSATQDNALAQNSLGFCYEEGIGIDKDPK 448
Query: 323 MLV 325
M V
Sbjct: 449 MAV 451
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +++G GV K+L A+ + K A +G+ A G Y D++E+ R
Sbjct: 326 GFCYQNGIGVTKDLKMAIFWYKKAAEQGNIFAYHSLGYCYQNGLGVTADQRESFFWYKRS 385
Query: 163 AAVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A PA Q +LG Y ++EAVK ++ + AQ L C G G+D
Sbjct: 386 AESNHAPA-QLSLGFCYRNGIGVEKNEKEAVKWFRLSATQDNALAQNSLGFCYEEGIGID 444
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ + A WY+RAA+ A N CY+ G G+P + +A W +AA H +AQ +
Sbjct: 445 KDPKMAVYWYMRAAKQNNPWAQCNLGFCYANGIGVPGNQAKAVYWYHKAAQQNHARAQDK 504
Query: 275 HGLGL 279
G+ L
Sbjct: 505 LGVHL 509
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLY 160
L G +++G GV KN +A+ F A + + LA G Y E +DK + A+ Y
Sbjct: 395 LSLGFCYRNGIGVEKNEKEAVKWFRLSATQDNALAQNSLGFCYEEGIGIDKDPKMAVYWY 454
Query: 161 RQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+AA +P Q NLG Y Q +AV ++A+ H RAQ +L + L G G
Sbjct: 455 MRAAKQNNPWAQCNLGFCYANGIGVPGNQAKAVYWYHKAAQQNHARAQDKLGVHLQAGTG 514
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
NL A R++ AA+ G V A Y+ ++CY G G+ + +A KW + A+
Sbjct: 515 CRQNLALAVRYFRLAAQQGQVAAQYHLAMCYEKGLGVERNLHEALKWFESAS 566
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 147 YWEMD---KKEAAISLYRQAAVLGD-PAGQFNLGISYL--------QEEAVKLLYQASIA 194
YWE + AI+ R+AA + +GQ+ LG Y + EA + +++
Sbjct: 113 YWESKLNARGCDAINWIRRAAEENNCSSGQYCLGTCYYDGIGVSKNEHEAFRWYKRSAKQ 172
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ R Q L C G GV+ N A WY AA G A YN CY G G+ +
Sbjct: 173 GNCRGQSILGYCYGEGYGVEKNETVAVEWYRLAATQGESVAAYNIGYCYEDGIGVVKNPG 232
Query: 255 QARKWMKRAADCGHGKAQ------LEHGLGL 279
+A W K AAD G+ AQ E G+G+
Sbjct: 233 KAVSWYKLAADQGNAFAQNSLGYCYEDGIGI 263
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 84/226 (37%), Gaps = 36/226 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQA 163
G + G GV KN +A + + A +G+ G Y E ++K E A+ YR A
Sbjct: 146 GTCYYDGIGVSKNEHEAFRWYKRSAKQGNCRGQSILGYCYGEGYGVEKNETVAVEWYRLA 205
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
A G+ +N+G C G GV N +A W
Sbjct: 206 ATQGESVAAYNIG----------------------------YCYEDGIGVVKNPGKAVSW 237
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GL 279
Y AA+ G A + CY G G+ A W +R+A+ G+ AQ G G+
Sbjct: 238 YKLAADQGNAFAQNSLGYCYEDGIGIKQDKAMAAFWYRRSAEQGYIWAQCNLGYCYQNGI 297
Query: 280 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ ++++ + A G A H Q ++D M +
Sbjct: 298 GIDKDVVQGAYWYSQAATQGHARAQHNLGFCYQNGIGVTKDLKMAI 343
>gi|148359764|ref|YP_001250971.1| TPR repeat-containing protein [Legionella pneumophila str. Corby]
gi|296107809|ref|YP_003619510.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila 2300/99 Alcoy]
gi|148281537|gb|ABQ55625.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila str. Corby]
gi|295649711|gb|ADG25558.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila 2300/99 Alcoy]
Length = 375
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 19/220 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 130 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 188
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA LG+ + Q+NLG+ Y Q + V YQ A+ H ++Q +L G+
Sbjct: 189 AADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYFEKAANQDHAKSQLELGYLYDSGKLGK 248
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 249 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 308
Query: 275 HGL----GLFTEGEMMKAVVYLELATRAG-ETAADHVKNV 309
G+ G+ + +KA + A G E AA + ++
Sbjct: 309 LGVYYRDGIGVAADPIKAYAWFTAAKNNGFEKAASNASDL 348
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 80/211 (37%), Gaps = 42/211 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM---DKKEAAISLYRQAA 164
GK + + +GV N +K L A +G+ A V YW + D + A Y++AA
Sbjct: 59 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPDGYKKAFEWYQKAA 118
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+ GQ+ LG Y G GV N A WY
Sbjct: 119 DQNNADGQYGLGYMY----------------------------DTGTGVPQNSDTAMVWY 150
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 283
+AAE G A Y G G+ QA W +AAD G+ AQ GL ++ +G
Sbjct: 151 KKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGD 209
Query: 284 ----EMMKAVVYLELATRAGETAADHVKNVI 310
+ KA Y E A DH K+ +
Sbjct: 210 GVPKDYQKAAEYFEKAAN-----QDHAKSQL 235
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 39/178 (21%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN------------------------- 216
E+A LL + G +AQY L + +GV +N
Sbjct: 37 EKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAG 96
Query: 217 ----------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++A WY +AA+ Y Y G G+P + A W K+AA+
Sbjct: 97 FYWYLNTPDGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQ 156
Query: 267 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ A L G G + + +A+ + A G +A + ++ +Q +D
Sbjct: 157 GNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKD 214
>gi|423113617|ref|ZP_17101308.1| hypothetical protein HMPREF9689_01365 [Klebsiella oxytoca 10-5245]
gi|376387888|gb|EHT00590.1| hypothetical protein HMPREF9689_01365 [Klebsiella oxytoca 10-5245]
Length = 375
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 19/212 (8%)
Query: 88 CKSWND--ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL 145
KSW + +++ +A LL G+ + G GV ++ +A + K AA+ A V+ +
Sbjct: 101 AKSWYEKASVQNDVDAQFLL--GEMYNDGLGVGQDYQQAKMWYEKAAAQNDERAQVNLAV 158
Query: 146 MY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------AS 192
+Y E D ++A S Y +AA P QF LGI Y V+ YQ A+
Sbjct: 159 LYAKGNGVEQDYRQAK-SWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAA 217
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
AQ+ L + ++G GV+ N Q+ W+ +AA + A YN Y +G+G+ S
Sbjct: 218 EQNFANAQFNLGMLYYKGEGVNQNFQQTREWFEKAASQNQLNAQYNLGQIYYYGQGVTQS 277
Query: 253 HRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+R+A++W ++AA GH AQ G+ ++ GE
Sbjct: 278 YRKAKEWFEKAAGEGHVDAQYNLGV-IYENGE 308
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 68 VLNKIAASFTLPQLRAASL-------VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKN 120
V N + A F L ++ L K W + + + + G GV ++
Sbjct: 110 VQNDVDAQFLLGEMYNDGLGVGQDYQQAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQD 169
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNL 175
+A + K AA+ S A G++Y E D ++A Y +AA QFNL
Sbjct: 170 YRQAKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAK-DWYEKAAEQNFANAQFNL 228
Query: 176 GISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ Y + E V +Q A+ + AQY L + G+GV + ++A W+ +A
Sbjct: 229 GMLYYKGEGVNQNFQQTREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRKAKEWFEKA 288
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
A G+V A YN + Y GEG+ QAR W K+
Sbjct: 289 AGEGHVDAQYNLGVIYENGEGVRQDFHQARAWYKK 323
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLG 176
D L G A GLMY ++D ++A I Y +AA DP Q LG
Sbjct: 27 DSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAAAQNDPRAQVKLG 85
Query: 177 ISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+ Y V YQ AS+ V AQ+ L + G GV + Q+A WY +AA
Sbjct: 86 LMYANGLGVNQDYQQAKSWYEKASVQNDVDAQFLLGEMYNDGLGVGQDYQQAKMWYEKAA 145
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
RA N ++ Y+ G G+ +RQA+ W ++AA AQ G+
Sbjct: 146 AQNDERAQVNLAVLYAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGI 194
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 12/193 (6%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 173 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 232
Query: 148 WEMDKKEAAI----SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAG 195
++ + + +AA Q+NLG Y + V Y +A+ G
Sbjct: 233 YKGEGVNQNFQQTREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRKAKEWFEKAAGEG 292
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
HV AQY L + G GV + +A WY +AA +A ++ + G+G ++ +Q
Sbjct: 293 HVDAQYNLGVIYENGEGVRQDFHQARAWYKKAAAQNDAQAQFDLGVMNELGQGGSINLKQ 352
Query: 256 ARKWMKRAADCGH 268
AR W A GH
Sbjct: 353 ARTWFGLACKNGH 365
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 145 LMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGH 196
++Y + +++ +S + A GD Q+ LG+ YL E + + YQ A+
Sbjct: 18 IVYAAISDRDSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAAAQND 77
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
RAQ +L L G GV+ + Q+A WY +A+ V A + Y+ G G+ ++QA
Sbjct: 78 PRAQVKLGLMYANGLGVNQDYQQAKSWYEKASVQNDVDAQFLLGEMYNDGLGVGQDYQQA 137
Query: 257 RKWMKRAADCGHGKAQL 273
+ W ++AA +AQ+
Sbjct: 138 KMWYEKAAAQNDERAQV 154
>gi|46446348|ref|YP_007713.1| hypothetical protein pc0714 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399989|emb|CAF23438.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 445
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 91/179 (50%), Gaps = 12/179 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G R+ +GRGV ++ +A + A +G A + G+ Y M ++ A Y+ A
Sbjct: 261 GVRYSNGRGVTQSDQEAFKYYKLAADQGHADAQYNLGVRYVNGQGVMRSEQEAAKYYKLA 320
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+NLG+ Y +EA+K A+ GH +AQY L + GRGV
Sbjct: 321 ADQGYVDAQYNLGVRYSNGRGVMQSDQEAIKYYKLAADQGHAKAQYNLGVRYSNGRGVTQ 380
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ QEA ++Y AA+ G +A YN Y+ G G+ S ++A K+ K AAD GH AQ E
Sbjct: 381 SEQEATKYYKLAADQGDAKAQYNLGARYANGRGVTQSEQEAAKYYKLAADQGHADAQYE 439
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKE-AAISLYRQA 163
G R+ +GRGV ++ +A+ + A +G A G MY W + + E AI Y+ A
Sbjct: 153 GVRYANGRGVTQSDQEAIKYYKLAAEQGHADAQYALGFMYANRWGIAQSEQEAIKYYKLA 212
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+ LG Y EA K A+ GH AQY L + GRGV
Sbjct: 213 AEQGHADAQYALGFIYANGLGVTQSDAEAFKYFKLAAEQGHANAQYNLGVRYSNGRGVTQ 272
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ QEA ++Y AA+ G+ A YN + Y G+G+ S ++A K+ K AAD G+ AQ
Sbjct: 273 SDQEAFKYYKLAADQGHADAQYNLGVRYVNGQGVMRSEQEAAKYYKLAADQGYVDAQYNL 332
Query: 276 GLGLFTEGEMM-----KAVVYLELATRAGETAADH 305
G+ ++ G + +A+ Y +LA G A +
Sbjct: 333 GV-RYSNGRGVMQSDQEAIKYYKLAADQGHAKAQY 366
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ +G GV ++ +A F A +G A + G+ Y + A Y+ AA
Sbjct: 228 YANGLGVTQSDAEAFKYFKLAAEQGHANAQYNLGVRYSNGRGVTQSDQEAFKYYKLAADQ 287
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q+NLG+ Y+ ++EA K A+ G+V AQY L + GRGV + Q
Sbjct: 288 GHADAQYNLGVRYVNGQGVMRSEQEAAKYYKLAADQGYVDAQYNLGVRYSNGRGVMQSDQ 347
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 274
EA ++Y AA+ G+ +A YN + YS G G+ S ++A K+ K AAD G KAQ
Sbjct: 348 EAIKYYKLAADQGHAKAQYNLGVRYSNGRGVTQSEQEATKYYKLAADQGDAKAQYNLGAR 407
Query: 275 --HGLGLFTEGEMMKAVVYLELATRAGETAADH 305
+G G+ T+ E +A Y +LA G A +
Sbjct: 408 YANGRGV-TQSE-QEAAKYYKLAADQGHADAQY 438
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 132 AARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQ------ 181
A +G A GLMY E + + +A AI ++ AA G Q+NLG+ Y
Sbjct: 105 ADQGDAKAQYKLGLMYDESCGVTQSDAEAIKYFKLAAKQGHADAQYNLGVRYANGRGVTQ 164
Query: 182 --EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+EA+K A+ GH AQY L G+ + QEA ++Y AAE G+ A Y
Sbjct: 165 SDQEAIKYYKLAAEQGHADAQYALGFMYANRWGIAQSEQEAIKYYKLAAEQGHADAQYAL 224
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y+ G G+ S +A K+ K AA+ GH AQ G+
Sbjct: 225 GFIYANGLGVTQSDAEAFKYFKLAAEQGHANAQYNLGV 262
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 167 GDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q+ LG+ Y + EA+K A+ GH AQY L + GRGV + Q
Sbjct: 108 GDAKAQYKLGLMYDESCGVTQSDAEAIKYFKLAAKQGHADAQYNLGVRYANGRGVTQSDQ 167
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 277
EA ++Y AAE G+ A Y Y+ G+ S ++A K+ K AA+ GH AQ G
Sbjct: 168 EAIKYYKLAAEQGHADAQYALGFMYANRWGIAQSEQEAIKYYKLAAEQGHADAQYALGFI 227
Query: 278 ---GLFTEGEMMKAVVYLELATRAGETAADH 305
GL +A Y +LA G A +
Sbjct: 228 YANGLGVTQSDAEAFKYFKLAAEQGHANAQY 258
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G R+ +GRGV ++ +A+ + A +G A + G+ Y ++ A Y+ A
Sbjct: 333 GVRYSNGRGVMQSDQEAIKYYKLAADQGHAKAQYNLGVRYSNGRGVTQSEQEATKYYKLA 392
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQL 203
A GD Q+NLG Y ++EA K A+ GH AQY+L
Sbjct: 393 ADQGDAKAQYNLGARYANGRGVTQSEQEAAKYYKLAADQGHADAQYEL 440
>gi|424043622|ref|ZP_17781245.1| cobalamin biosynthesis CobT VWA domain protein [Vibrio cholerae
HENC-03]
gi|408888151|gb|EKM26612.1| cobalamin biosynthesis CobT VWA domain protein [Vibrio cholerae
HENC-03]
Length = 936
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 13/188 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G+GV ++ +A+ + K A +G A + G MY E E A+S YR+A
Sbjct: 351 GWMYRNGKGVPQDDAQAVYWYRKAADQGYARAESNLGWMYEEGKGVPQDDEQAVSWYRKA 410
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD GQ NLG Y + E+AV +A+ G+ AQ L + G+GV
Sbjct: 411 AEQGDERGQANLGWMYKEGKGVPQDYEQAVSWYRKAAGQGYALAQNNLGIMYEEGKGVPQ 470
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A WY +AAE GY A N L Y G+G+ +QA W ++AA+ G+ + Q
Sbjct: 471 DDIQAVSWYKKAAEQGYALAQNNLGLMYEEGKGVLQDDKQAVSWYRKAAEQGYARGQTNL 530
Query: 276 GLGLFTEG 283
G ++ EG
Sbjct: 531 GW-MYEEG 537
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV ++ ++A+ + K A +G + G MY E E A+S YR+A
Sbjct: 387 GWMYEEGKGVPQDDEQAVSWYRKAAEQGDERGQANLGWMYKEGKGVPQDYEQAVSWYRKA 446
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLGI Y + +AV +A+ G+ AQ L L G+GV
Sbjct: 447 AGQGYALAQNNLGIMYEEGKGVPQDDIQAVSWYKKAAEQGYALAQNNLGLMYEEGKGVLQ 506
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A WY +AAE GY R N Y G G+P ++QA W ++AA+ Q+
Sbjct: 507 DDKQAVSWYRKAAEQGYARGQTNLGWMYEEGRGVPQDNKQAVSWYRKAAEKDDATGQVYL 566
Query: 276 GLGLFTEGE 284
G ++ EG+
Sbjct: 567 GW-MYEEGK 574
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 20/221 (9%)
Query: 78 LPQLRAASLVCKSW--NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
+PQ A +L SW A + V L W +++G+GV ++ +A+ + K A +G
Sbjct: 288 VPQDDAQAL---SWYRKAAEQGYANGQVNLGW--MYRNGKGVPQDDAQAVSWYRKAALQG 342
Query: 136 STLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQ--------EE 183
S + G MY + + +A A+ YR+AA G + NLG Y + E+
Sbjct: 343 SARGQTNLGWMYRNGKGVPQDDAQAVYWYRKAADQGYARAESNLGWMYEEGKGVPQDDEQ 402
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
AV +A+ G R Q L G+GV + ++A WY +AA GY A N + Y
Sbjct: 403 AVSWYRKAAEQGDERGQANLGWMYKEGKGVPQDYEQAVSWYRKAAGQGYALAQNNLGIMY 462
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
G+G+P QA W K+AA+ G+ AQ GL ++ EG+
Sbjct: 463 EEGKGVPQDDIQAVSWYKKAAEQGYALAQNNLGL-MYEEGK 502
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 20/190 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + G+G+ + KA+ + K + +G LA + G MY +K E A+ Y
Sbjct: 99 GSMYDGGKGIPLDDTKAVYWYGKASEQGDALAQSNLGAMY---EKGEGVPQDDTRAVYWY 155
Query: 161 RQAAVLGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+++A G GQ NLG +S +AV +A+ G+ +AQ L GRG
Sbjct: 156 KKSAGQGHSRGQNNLGWMYEDGKGVSQDDTQAVYWYRKAAEQGYAKAQTNLGWMYKVGRG 215
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + ++A WY +AAE + RA N Y G G P QA W ++AAD G+ +A
Sbjct: 216 VPQDDKQAVSWYRKAAEQEFARAQTNLGWMYEMGRGAPQDDTQAVFWYRKAADQGYARA- 274
Query: 273 LEHGLGLFTE 282
E+ LG+ E
Sbjct: 275 -ENNLGVMYE 283
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 13/189 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV ++ +A+ + K A +G LA + GLMY E + + A+S YR+A
Sbjct: 459 GIMYEEGKGVPQDDIQAVSWYKKAAEQGYALAQNNLGLMYEEGKGVLQDDKQAVSWYRKA 518
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G GQ NLG Y + ++AV +A+ Q L G+GV
Sbjct: 519 AEQGYARGQTNLGWMYEEGRGVPQDNKQAVSWYRKAAEKDDATGQVYLGWMYEEGKGVPR 578
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A WY ++AE G A + Y G+G+ ++QA W ++AA+ G Q
Sbjct: 579 DNKQAVSWYRKSAEQGDADAQNSLGFMYEEGKGVLQDYKQAVSWYRKAAEQGSALGQSNL 638
Query: 276 GLGLFTEGE 284
G ++ EG+
Sbjct: 639 GR-MYKEGK 646
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G GV ++ +A+ + K A +G + + G MY + A+ YR+A
Sbjct: 135 GAMYEKGEGVPQDDTRAVYWYKKSAGQGHSRGQNNLGWMYEDGKGVSQDDTQAVYWYRKA 194
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG Y ++AV +A+ RAQ L GRG
Sbjct: 195 AEQGYAKAQTNLGWMYKVGRGVPQDDKQAVSWYRKAAEQEFARAQTNLGWMYEMGRGAPQ 254
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A WY +AA+ GY RA N + Y G+G+P QA W ++AA+ G+ Q+
Sbjct: 255 DDTQAVFWYRKAADQGYARAENNLGVMYEEGKGVPQDDAQALSWYRKAAEQGYANGQVNL 314
Query: 276 G 276
G
Sbjct: 315 G 315
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++ G+GV ++ +A+ + K A +G A + G MY D K+A +S YR+
Sbjct: 171 GWMYEDGKGVSQDDTQAVYWYRKAAEQGYAKAQTNLGWMYKVGRGVPQDDKQA-VSWYRK 229
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA Q NLG Y +AV +A+ G+ RA+ L + G+GV
Sbjct: 230 AAEQEFARAQTNLGWMYEMGRGAPQDDTQAVFWYRKAADQGYARAENNLGVMYEEGKGVP 289
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY +AAE GY N Y G+G+P QA W ++AA G + Q
Sbjct: 290 QDDAQALSWYRKAAEQGYANGQVNLGWMYRNGKGVPQDDAQAVSWYRKAALQGSARGQTN 349
Query: 275 HG 276
G
Sbjct: 350 LG 351
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 17/191 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G +K GRGV ++ +A+ + K A + A + G MY EM + A+ YR+
Sbjct: 207 GWMYKVGRGVPQDDKQAVSWYRKAAEQEFARAQTNLGWMY-EMGRGAPQDDTQAVFWYRK 265
Query: 163 AAVLGDPAGQFNLGISYL------QEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
AA G + NLG+ Y Q++A L + +A+ G+ Q L G+GV
Sbjct: 266 AADQGYARAENNLGVMYEEGKGVPQDDAQALSWYRKAAEQGYANGQVNLGWMYRNGKGVP 325
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY +AA G R N Y G+G+P QA W ++AAD G+ +A E
Sbjct: 326 QDDAQAVSWYRKAALQGSARGQTNLGWMYRNGKGVPQDDAQAVYWYRKAADQGYARA--E 383
Query: 275 HGLG-LFTEGE 284
LG ++ EG+
Sbjct: 384 SNLGWMYEEGK 394
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A+ + K A +G + G MY E D K+A +S YR+
Sbjct: 495 GLMYEEGKGVLQDDKQAVSWYRKAAEQGYARGQTNLGWMYEEGRGVPQDNKQA-VSWYRK 553
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA D GQ LG Y + ++AV +++ G AQ L G+GV
Sbjct: 554 AAEKDDATGQVYLGWMYEEGKGVPRDNKQAVSWYRKSAEQGDADAQNSLGFMYEEGKGVL 613
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ ++A WY +AAE G N Y G+G+P Q+ W ++A+ G Q
Sbjct: 614 QDYKQAVSWYRKAAEQGSALGQSNLGRMYKEGKGVPRDDTQSIYWYQKASKHEDGYTQ 671
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 150 MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-----EEAVKLLY---QASIAGHVRAQY 201
M + A+ Y +AA G Q NLG + ++ K +Y +A+ G+ RAQ
Sbjct: 1 MQDDKKAVYWYAKAAEQGYARAQTNLGWMHKSGRGGPQDDTKAVYWYRKAAEQGYARAQV 60
Query: 202 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261
L G+GV + +A WY +AAE Y R N Y G+G+PL +A W
Sbjct: 61 NLGWMYEGGKGVPQDDTQAVYWYRKAAEQEYARGQNNLGSMYDGGKGIPLDDTKAVYWYG 120
Query: 262 RAADCGHGKAQLEHGLGLFTEGE 284
+A++ G AQ G ++ +GE
Sbjct: 121 KASEQGDALAQSNLG-AMYEKGE 142
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLYRQAAVLGDPAGQFNLG 176
KA+ + K A +G A + G M+ + D K A+ YR+AA G Q NLG
Sbjct: 6 KAVYWYAKAAEQGYARAQTNLGWMHKSGRGGPQDDTK--AVYWYRKAAEQGYARAQVNLG 63
Query: 177 ISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
Y +AV +A+ + R Q L G+G+ + +A WY +A+
Sbjct: 64 WMYEGGKGVPQDDTQAVYWYRKAAEQEYARGQNNLGSMYDGGKGIPLDDTKAVYWYGKAS 123
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
E G A N Y GEG+P +A W K++A GH + Q + LG E
Sbjct: 124 EQGDALAQSNLGAMYEKGEGVPQDDTRAVYWYKKSAGQGHSRGQ--NNLGWMYE 175
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
++AV +A+ G+ RAQ L GRG + +A WY +AAE GY RA N
Sbjct: 5 KKAVYWYAKAAEQGYARAQTNLGWMHKSGRGGPQDDTKAVYWYRKAAEQGYARAQVNLGW 64
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG------EMMKAVVYLELA 295
Y G+G+P QA W ++AA+ + + Q + LG +G + KAV + A
Sbjct: 65 MYEGGKGVPQDDTQAVYWYRKAAEQEYARGQ--NNLGSMYDGGKGIPLDDTKAVYWYGKA 122
Query: 296 TRAGETAA 303
+ G+ A
Sbjct: 123 SEQGDALA 130
>gi|345892243|ref|ZP_08843066.1| hypothetical protein HMPREF1022_01726 [Desulfovibrio sp.
6_1_46AFAA]
gi|345047382|gb|EGW51247.1| hypothetical protein HMPREF1022_01726 [Desulfovibrio sp.
6_1_46AFAA]
Length = 353
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKKE-AAISLYRQ 162
WG G+GVR+N +A F K A +G +A + G +Y + K E AAI Y +
Sbjct: 111 WGTAQASGQGVRRNYREAARWFRKAAEQGLAMAQYNLGYLYAYGRGVPKDENAAIDWYSR 170
Query: 163 AAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q++LG +YL + AV +A+ +++AQ LA GRG
Sbjct: 171 AANQGLADAQYSLGWTYLNSKGENQSDTKAVHWFEKAAEQDNLKAQNNLAYMYAEGRGYA 230
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A +WY RAAE GY A YN Y G G+P + +A +W ++AA+ AQ
Sbjct: 231 QDPVKAVQWYNRAAERGYAEAQYNLGFMYEQGRGVPQDYNKAVEWYRKAAEQNEPAAQYS 290
Query: 275 HGLGLFTEG-----EMMKAVVYLELATRAGETAADHV 306
GL ++ +G + +A + LA + G+ A V
Sbjct: 291 LGL-MYDQGTGVPRNLSEATRWYRLAAKNGDPDAKAV 326
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ ++ A +L QA+ G + AQ G+GV N +EAARW+ +AAE G A
Sbjct: 84 GVKKSEQRAAQLFRQAAEKGDISAQNAWGTAQASGQGVRRNYREAARWFRKAAEQGLAMA 143
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMM---KAVVY 291
YN Y++G G+P A W RAA+ G AQ G L ++GE KAV +
Sbjct: 144 QYNLGYLYAYGRGVPKDENAAIDWYSRAANQGLADAQYSLGWTYLNSKGENQSDTKAVHW 203
Query: 292 LELAT 296
E A
Sbjct: 204 FEKAA 208
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 164 AVLGDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
A L D AG + +++ +AV LL + G+ A Y L G+GV + Q
Sbjct: 32 AALADEAGDLRNAQAAIEKADYGKAVALLKPLADKGNAEALYVLGRLTLDGKGVKKSEQR 91
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
AA+ + +AAE G + A + G+G+ ++R+A +W ++AA+ G AQ G
Sbjct: 92 AAQLFRQAAEKGDISAQNAWGTAQASGQGVRRNYREAARWFRKAAEQGLAMAQYNLG 148
>gi|54295067|ref|YP_127482.1| hypothetical protein lpl2147 [Legionella pneumophila str. Lens]
gi|53754899|emb|CAH16387.1| hypothetical protein lpl2147 [Legionella pneumophila str. Lens]
Length = 373
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 126/246 (51%), Gaps = 24/246 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 128 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 186
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA LG+ + Q+NLG+ Y Q + V +Q A+ H ++Q +L G+
Sbjct: 187 AADLGNASAQYNLGLMYEQGDGVPKDFQKAAEYFEKAANQDHAKSQLELGYLYDSGKLGK 246
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 247 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 306
Query: 275 HGL----GLFTEGEMMKAVVYLELA-----TRAGETAADHVKNVILQQLSATSRDRAMLV 325
G+ G+ + +KA + A +A A+D K++ + LS +R
Sbjct: 307 LGIYYRDGIGVAADPVKAYAWFTAAKSNGFEKAASNASDLEKSMNPEDLS-KARTLGQQY 365
Query: 326 VDSWRA 331
D+++A
Sbjct: 366 TDNYKA 371
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 80/211 (37%), Gaps = 42/211 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---AISLYRQAA 164
GK + + +GV N +K L A +G+ A V YW ++ E A Y++AA
Sbjct: 57 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAA 116
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+ GQ+ LG Y G GV N A WY
Sbjct: 117 DQNNADGQYGLGYMY----------------------------DTGTGVPQNSDTAMVWY 148
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 283
+AAE G A Y G G+ QA W +AAD G+ AQ GL ++ +G
Sbjct: 149 KKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGD 207
Query: 284 ----EMMKAVVYLELATRAGETAADHVKNVI 310
+ KA Y E A DH K+ +
Sbjct: 208 GVPKDFQKAAEYFEKAAN-----QDHAKSQL 233
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 39/178 (21%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN------------------------- 216
E+A LL + G +AQY L + +GV +N
Sbjct: 35 EKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAG 94
Query: 217 ----------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++A WY +AA+ Y Y G G+P + A W K+AA+
Sbjct: 95 FYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQ 154
Query: 267 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ A L G G + + +A+ + A G +A + ++ +Q +D
Sbjct: 155 GNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKD 212
>gi|417666054|ref|ZP_12315615.1| tetratricopeptide repeat family protein [Escherichia coli STEC_O31]
gi|397786390|gb|EJK97227.1| tetratricopeptide repeat family protein [Escherichia coli STEC_O31]
Length = 328
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 17/198 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 65 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 122
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALC 206
A S Y +AA P QF LGI Y V+ YQ A+ AQ+ L +
Sbjct: 123 AK-SWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGML 181
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++G GV N ++A W+ +AA + A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 182 YYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEK 241
Query: 267 GHGKAQLEHGLGLFTEGE 284
GH AQ G+ ++ GE
Sbjct: 242 GHVDAQYNLGV-IYENGE 258
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G GV ++ +A + K AA+ S A G++Y E D ++A Y +AA
Sbjct: 110 YAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAK-DWYEKAAE 168
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
QFNLG+ Y + E VK + +A+ + AQY L + G+GV +
Sbjct: 169 QNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSY 228
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA +AQ E L
Sbjct: 229 RQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE--L 286
Query: 278 GLFTE 282
G+ E
Sbjct: 287 GVMNE 291
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 18/195 (9%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 123 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 182
Query: 148 WEMDKKEAAISLYRQA-------AVLGDPAGQFNLGISYLQEEAVKLLY--------QAS 192
+ K E +RQA A Q+NLG Y + V Y +A+
Sbjct: 183 Y---KGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAA 239
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
GHV AQY L + G GV N Q+A WY +AA +A + + G+G +
Sbjct: 240 EKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESID 299
Query: 253 HRQARKWMKRAADCG 267
+QAR + +R+ + G
Sbjct: 300 LKQARHYYERSCNNG 314
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQ 200
++D ++A I Y +AA DP Q LG+ Y V YQ A+ V AQ
Sbjct: 9 DVDYQQAKI-WYEKAADQNDPRAQAKLGVMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQ 67
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ L G GV + Q A WY +AA RA N ++ Y+ G G+ +RQA+ W
Sbjct: 68 FLLGEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQAKSWY 127
Query: 261 KRAADCGHGKAQLEHGL 277
++AA AQ G+
Sbjct: 128 EKAAAQNSPDAQFALGI 144
>gi|307611062|emb|CBX00703.1| Dot/Icm T4SS effector [Legionella pneumophila 130b]
Length = 375
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 126/246 (51%), Gaps = 24/246 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 130 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 188
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA LG+ + Q+NLG+ Y Q + V +Q A+ H ++Q +L G+
Sbjct: 189 AADLGNASAQYNLGLMYEQGDGVPKDFQKAAEYFEKAANQDHAKSQLELGYLYDSGKLGK 248
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 249 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 308
Query: 275 HGL----GLFTEGEMMKAVVYLELA-----TRAGETAADHVKNVILQQLSATSRDRAMLV 325
G+ G+ + +KA + A +A A+D K++ + LS +R
Sbjct: 309 LGIYYRDGIGVAADPVKAYAWFTAAKSNGFEKAASNASDLEKSMNPEDLS-KARTLGQQY 367
Query: 326 VDSWRA 331
D+++A
Sbjct: 368 TDNYKA 373
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 80/211 (37%), Gaps = 42/211 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---AISLYRQAA 164
GK + + +GV N +K L A +G+ A V YW ++ E A Y++AA
Sbjct: 59 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAA 118
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+ GQ+ LG Y G GV N A WY
Sbjct: 119 DQNNADGQYGLGYMY----------------------------DTGTGVPQNSDTAMVWY 150
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 283
+AAE G A Y G G+ QA W +AAD G+ AQ GL ++ +G
Sbjct: 151 KKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGD 209
Query: 284 ----EMMKAVVYLELATRAGETAADHVKNVI 310
+ KA Y E A DH K+ +
Sbjct: 210 GVPKDFQKAAEYFEKAAN-----QDHAKSQL 235
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 39/178 (21%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN------------------------- 216
E+A LL + G +AQY L + +GV +N
Sbjct: 37 EKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAG 96
Query: 217 ----------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++A WY +AA+ Y Y G G+P + A W K+AA+
Sbjct: 97 FYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQ 156
Query: 267 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ A L G G + + +A+ + A G +A + ++ +Q +D
Sbjct: 157 GNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKD 214
>gi|257063145|ref|YP_003142817.1| hypothetical protein Shel_04070 [Slackia heliotrinireducens DSM
20476]
gi|256790798|gb|ACV21468.1| TPR repeat-containing protein [Slackia heliotrinireducens DSM 20476]
Length = 1032
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
E + G+ +G+G KN +A F + A G LAM G+MY +
Sbjct: 839 ETESMYNLGRMLANGQGTGKNPLEAAQWFRRAAEDGHELAMYHLGVMYANGEGVARNPHE 898
Query: 156 AISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCL 207
A++ YR+AA LG+ +NLG+ ++A + +A GHV A LAL
Sbjct: 899 ALTWYRKAADLGNANAMYNLGVMLAGGIGVERNPQQAARWYRKAIGKGHVAAMNNLALMY 958
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
RG GV+ NL+EA W+ AA+ G AMYN + Y G+G+ ++A+ W ++AA G
Sbjct: 959 ERGEGVEKNLKEAVSWWKIAAKKGSPNAMYNLARMYESGQGVAKDKKEAQNWYRKAASYG 1018
Query: 268 HGKAQL 273
AQL
Sbjct: 1019 QAGAQL 1024
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 12/182 (6%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEA-AISLYRQAAV 165
R +G GV+KN +A + + K A G AM GLMY + + K A A+ +R+AA
Sbjct: 741 RLANGGGVKKNAKQAANWYRKAADAGHAPAMNSLGLMYEQGEGVAKNHAEAMRWFRKAAD 800
Query: 166 LGDPAGQFNLG--ISYLQE------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G+ N+G +S +E EA + +A+ G + Y L L G+G N
Sbjct: 801 AGNVMAMCNMGRMLSTGKEASKNLMEAAQWYRKAAEFGETESMYNLGRMLANGQGTGKNP 860
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
EAA+W+ RAAE G+ AMY+ + Y+ GEG+ + +A W ++AAD G+ A G+
Sbjct: 861 LEAAQWFRRAAEDGHELAMYHLGVMYANGEGVARNPHEALTWYRKAADLGNANAMYNLGV 920
Query: 278 GL 279
L
Sbjct: 921 ML 922
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 106/220 (48%), Gaps = 22/220 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-----MYWEMDKKE 154
EAM +L G G + AL + K A G+ AM + G+ + E D+++
Sbjct: 625 EAMGIL--ADMLSQGEGTGADRQTALLWYCKAADAGNAEAMYNLGVKCANGIDVEKDQQK 682
Query: 155 AAISLYRQAAV---------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLAL 205
A I YR+AA LG ++ G++ +AVK A+ G+ A Y LA+
Sbjct: 683 A-IGWYRKAADAGHAAAMCSLGTIC-EYGNGVTKNLAQAVKWYRDAANLGNPNAMYNLAV 740
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
L G GV N ++AA WY +AA+ G+ AM + L Y GEG+ +H +A +W ++AAD
Sbjct: 741 RLANGGGVKKNAKQAANWYRKAADAGHAPAMNSLGLMYEQGEGVAKNHAEAMRWFRKAAD 800
Query: 266 CGHGKAQLEHGLGLFTEGE----MMKAVVYLELATRAGET 301
G+ A G L T E +M+A + A GET
Sbjct: 801 AGNVMAMCNMGRMLSTGKEASKNLMEAAQWYRKAAEFGET 840
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEA--AISLYRQAAVLGD 168
HG G +K+L +A D F + A G AM + G+MY D KK+A A S YR+AA G
Sbjct: 389 HGNGAKKDLAEAFDLFKRAAEAGHPQAMFNTGVMYAHGDGVKKDATEAASWYRKAADAGV 448
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
NLGI + + +EA L +AS + Y L + L G GV N QEA
Sbjct: 449 TGAMCNLGIMHERGDGVAKDPQEAASLYRKASDLDNALGAYNLGIMLLNGSGVAKNPQEA 508
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
A RAA G AM Y GEG+ + + A K+ + AA G+ +A + G L+
Sbjct: 509 ALHLRRAAALGNTEAMIKMGEAYESGEGVRKNKKSAVKFYRDAASQGNTEAMCKLG-ALY 567
Query: 281 TEG 283
EG
Sbjct: 568 EEG 570
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 87/215 (40%), Gaps = 49/215 (22%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKG------------------------------------ 131
G R + G GV +N+ AL +LKG
Sbjct: 167 GLRAEIGEGVERNIGTALSHYLKGADLGDPDCQYRAAYLLDTEESLAFQRGRCAALYESA 226
Query: 132 AARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEE---- 183
A+ G+ A+ + L Y D A L AA LG+ A Q+NL I Y E
Sbjct: 227 ASSGNADALSNLALFYLSGDLVGRNPVRAAELMESAAKLGNAAAQYNLAIIYRDGEDGVP 286
Query: 184 -----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
A+ L A+ G A +A +G G N +EAARWY +AAE G + AMY
Sbjct: 287 ADLNRAIPLFKAAAEQGDADAALAVADACAQGEGAVKNPKEAARWYRKAAEAGRMDAMYE 346
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
L Y G G+ + R+A W ++AAD G+ A
Sbjct: 347 LGLLYERGNGVTENRREAVSWYRKAADAGNADAMF 381
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGD 168
G G KN +A + K A G AM + GL+Y + + A+S YR+AA G+
Sbjct: 317 QGEGAVKNPKEAARWYRKAAEAGRMDAMYELGLLYERGNGVTENRREAVSWYRKAADAGN 376
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
F L L EA L +A+ AGH +A + + G GV + EA
Sbjct: 377 ADAMFRLASIRLHGNGAKKDLAEAFDLFKRAAEAGHPQAMFNTGVMYAHGDGVKKDATEA 436
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
A WY +AA+ G AM N + + G+G+ ++A ++A+D L++ LG +
Sbjct: 437 ASWYRKAADAGVTGAMCNLGIMHERGDGVAKDPQEAASLYRKASD-------LDNALGAY 489
Query: 281 TEGEMM 286
G M+
Sbjct: 490 NLGIML 495
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 7/169 (4%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDK-KEAAIS 158
+++ G+ ++ G GVRKN A+ + A++G+T AM G +Y E +D+ ++ A
Sbjct: 523 AMIKMGEAYESGEGVRKNKKSAVKFYRDAASQGNTEAMCKLGALYEEGSGVDRNRQEAAE 582
Query: 159 LYRQAAVLGDPAGQFNLGI---SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
YR+AA LG LG + A L A+ G+ A LA L +G G
Sbjct: 583 WYRKAAKLGSTEATCALGKLCRKHDASTAFGLFESAAKEGNAEAMGILADMLSQGEGTGA 642
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ Q A WY +AA+ G AMYN + + G + ++A W ++AA
Sbjct: 643 DRQTALLWYCKAADAGNAEAMYNLGVKCANGIDVEKDQQKAIGWYRKAA 691
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 100/270 (37%), Gaps = 83/270 (30%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAIS 158
+ G + HG GV+K+ +A + K A G T AM + G+M+ D + A S
Sbjct: 415 AMFNTGVMYAHGDGVKKDATEAASWYRKAADAGVTGAMCNLGIMHERGDGVAKDPQEAAS 474
Query: 159 LYRQAAVLGDPAGQFNLGISYL-------------------------------------- 180
LYR+A+ L + G +NLGI L
Sbjct: 475 LYRKASDLDNALGAYNLGIMLLNGSGVAKNPQEAALHLRRAAALGNTEAMIKMGEAYESG 534
Query: 181 ------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
++ AVK A+ G+ A +L G GVD N QEAA WY +AA+ G
Sbjct: 535 EGVRKNKKSAVKFYRDAASQGNTEAMCKLGALYEEGSGVDRNRQEAAEWYRKAAKLGSTE 594
Query: 235 AM---------YNTSLCY----------------------SFGEGLPLSHRQARKWMKRA 263
A ++ S + S GEG + A W +A
Sbjct: 595 ATCALGKLCRKHDASTAFGLFESAAKEGNAEAMGILADMLSQGEGTGADRQTALLWYCKA 654
Query: 264 ADCGHGKAQLEHGL----GLFTEGEMMKAV 289
AD G+ +A G+ G+ E + KA+
Sbjct: 655 ADAGNAEAMYNLGVKCANGIDVEKDQQKAI 684
>gi|348506557|ref|XP_003440825.1| PREDICTED: protein sel-1 homolog 1 [Oreochromis niloticus]
Length = 805
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 110/214 (51%), Gaps = 14/214 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAVLGD 168
GRGV +N +A D F + A G+T AM G MY E + E A+ +++A+ LG+
Sbjct: 379 GRGVEQNHQRAYDYFNQAANAGNTHAMAFLGKMYSEGSEFLPQNNETALQYFKKASDLGN 438
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 439 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGTMYYNGIGVKRDYKQA 498
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++ G++ A YN + ++ G G+ S A + K + G +L G F
Sbjct: 499 LKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYGSF 558
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 313
EG++ A+V YL LA + E A +V ++ Q+
Sbjct: 559 KEGDLDAALVQYLLLAEQGYEVAQSNVAFILDQK 592
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW E+A++ YR
Sbjct: 254 GFLYAAGLGVNSSQAKALVYYTFGALGGNLVAHMILGYRYWGGVGVPQSCESALTHYRLV 313
Query: 164 A--------VLGDPAGQ--------FNLGIS--YLQEEAVKLLYQASIAGHVRAQYQLA- 204
A + G A Q N G + L+E+ ++ + G V+AQ L
Sbjct: 314 ANQVASDVSLTGGSAVQRIRLLDEVENPGSTSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 373
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G E LP ++ A ++ K+A
Sbjct: 374 LHLHGGRGVEQNHQRAYDYFNQAANAGNTHAMAFLGKMYSEGSEFLPQNNETALQYFKKA 433
Query: 264 ADCGHGKAQLEHGLGL 279
+D G+ Q GLG+
Sbjct: 434 SDLGNPVGQ--SGLGM 447
>gi|365834905|ref|ZP_09376343.1| Sel1 repeat protein [Hafnia alvei ATCC 51873]
gi|364567745|gb|EHM45398.1| Sel1 repeat protein [Hafnia alvei ATCC 51873]
Length = 717
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 127 SFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNL--------GIS 178
S LK A +G A G Y+E ++ + A+ Y++AA G Q NL G+
Sbjct: 29 SLLKEAQQGDASAQNKIGDSYFEEEEYQQALIWYQKAADQGFITAQINLAYMYDDGDGVP 88
Query: 179 YLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
++AV +A+ G+ AQ+ LAL G+GV + ++A WY +AAE GY A +N
Sbjct: 89 KNDQQAVVWYRKAAEQGNANAQFNLALKYDEGKGVPLDNKQAVAWYQKAAEQGYAFAQFN 148
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELA 295
+L Y G+G+PL RQA W ++AA+ G+ AQ G + GE + ++L ++
Sbjct: 149 LALKYGEGQGIPLDDRQAVVWYQKAAEQGYADAQNNLG-AAYQNGEGVPRNIHLAIS 204
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGIS 178
+AL + K A +G A ++ MY + D + A+ YR+AA G+ QFNL +
Sbjct: 57 QALIWYQKAADQGFITAQINLAYMYDDGDGVPKNDQQAVVWYRKAAEQGNANAQFNLALK 116
Query: 179 YLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y + + V L + ++A G+ AQ+ LAL G+G+ + ++A WY +AAE
Sbjct: 117 YDEGKGVPLDNKQAVAWYQKAAEQGYAFAQFNLALKYGEGQGIPLDDRQAVVWYQKAAEQ 176
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
GY A N Y GEG+P + A W +++A+
Sbjct: 177 GYADAQNNLGAAYQNGEGVPRNIHLAISWYEKSAE 211
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 94/240 (39%), Gaps = 49/240 (20%)
Query: 82 RAASLVCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
R + K +ND++ ++ + K++ HG G K+ KAL
Sbjct: 370 RIINFFVKDFNDSIAWIKNEKTVDDIAEEFTLSKKYDHGNGTIKDYQKAL---------- 419
Query: 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLG--------ISYLQEEAVKL 187
+S Y+Q A D Q+NLG + +AV
Sbjct: 420 ---------------------LSWYQQTADRDDAEAQYNLGRMLEDGTGVPQNPRQAVVW 458
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+++ +V AQY LAL G + N +A WY +AAE GY A N + Y +
Sbjct: 459 YKKSAEQDYVVAQYSLALMYDLGNKIPQNYPQALIWYTKAAEQGYAVAQNNLAAMYGNAK 518
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
G+P + +A W ++A+ G AQ G G T + KA+++ A G + A
Sbjct: 519 GIPRDNNKALIWYTKSAEQGFCIAQYNVGQVYENGSGTPIDYHKALMWYTKAAEKGASVA 578
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 85/213 (39%), Gaps = 51/213 (23%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ G+GV + +A+ + K A +G A + L Y E +D ++A + Y++AA
Sbjct: 116 KYDEGKGVPLDNKQAVAWYQKAAEQGYAFAQFNLALKYGEGQGIPLDDRQAVV-WYQKAA 174
Query: 165 VLGDPAGQFNLGISYLQEEAV--------------------------------------- 185
G Q NLG +Y E V
Sbjct: 175 EQGYADAQNNLGAAYQNGEGVPRNIHLAISWYEKSAEQENYTAESNLEKIYRSGDGVPKD 234
Query: 186 ----KLLYQASIAGHVRAQYQ--LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
Q S A +A+YQ LA + G GV + Q+AA W+ ++A GY A YN
Sbjct: 235 TQKANFWMQRSYAEQGKAKYQNSLATLYYNGTGVSQDYQKAAIWFQKSANQGYAMAQYNL 294
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
L Y +G+G+ A W +AA+ KAQ
Sbjct: 295 GLIYEYGKGVTPDFPLALSWYTKAAEKDDIKAQ 327
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 28/239 (11%)
Query: 68 VLNKIAASFTLPQ--------LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRK 119
++ IA FTL + ++ SW +A G+ + G GV +
Sbjct: 391 TVDDIAEEFTLSKKYDHGNGTIKDYQKALLSWYQQTADRDDAEAQYNLGRMLEDGTGVPQ 450
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAVLGDPAGQFN 174
N +A+ + K A + +A LMY ++ K A+ Y +AA G Q N
Sbjct: 451 NPRQAVVWYKKSAEQDYVVAQYSLALMY-DLGNKIPQNYPQALIWYTKAAEQGYAVAQNN 509
Query: 175 L--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
L GI +A+ +++ G AQY + G G + +A WY +
Sbjct: 510 LAAMYGNAKGIPRDNNKALIWYTKSAEQGFCIAQYNVGQVYENGSGTPIDYHKALMWYTK 569
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGL 279
AAE G A Y G G+ ++ A +W ++ G+ +A+ +GLG+
Sbjct: 570 AAEKGASVAYVKIGHIYRDGRGVAQNYTTAIEWYQKGIASGNIEAKTSLAEMSYYGLGV 628
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 23/221 (10%)
Query: 63 SLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLD 122
+L +D+ NKI PQ +L+ W A+ + + +G+ ++ +
Sbjct: 475 ALMYDLGNKI------PQNYPQALI---WYTKAAEQGYAVAQNNLAAMYGNAKGIPRDNN 525
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGI 177
KAL + K A +G +A + G +Y +D +A + Y +AA G +G
Sbjct: 526 KALIWYTKSAEQGFCIAQYNVGQVYENGSGTPIDYHKA-LMWYTKAAEKGASVAYVKIGH 584
Query: 178 SYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y V Y +I +G++ A+ LA + G GV N Q+A Y A+
Sbjct: 585 IYRDGRGVAQNYTTAIEWYQKGIASGNIEAKTSLAEMSYYGLGVAQNYQKAFSQYEELAK 644
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GY Y GEG+ + QA W A G K
Sbjct: 645 QGYASPQSTLGYLYENGEGVAKDYIQAWAWYAVAVYNGEQK 685
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 20/205 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAVLGD 168
G + +N +AL + K A +G +A + MY D +A I Y ++A G
Sbjct: 481 GNKIPQNYPQALIWYTKAAEQGYAVAQNNLAAMYGNAKGIPRDNNKALI-WYTKSAEQGF 539
Query: 169 PAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLHRGRGVDFNLQEA 220
Q+N+G Y + Y ++ + +A ++ GRGV N A
Sbjct: 540 CIAQYNVGQVYENGSGTPIDYHKALMWYTKAAEKGASVAYVKIGHIYRDGRGVAQNYTTA 599
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
WY + G + A + + +G G+ ++++A + A G+ Q G L+
Sbjct: 600 IEWYQKGIASGNIEAKTSLAEMSYYGLGVAQNYQKAFSQYEELAKQGYASPQSTLGY-LY 658
Query: 281 TEGE-----MMKAVVYLELATRAGE 300
GE ++A + +A GE
Sbjct: 659 ENGEGVAKDYIQAWAWYAVAVYNGE 683
>gi|255261700|ref|ZP_05341042.1| Sel1 repeat family protein [Thalassiobium sp. R2A62]
gi|255104035|gb|EET46709.1| Sel1 repeat family protein [Thalassiobium sp. R2A62]
Length = 348
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 95 LRPLRE------------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD 142
LRP E A LL G ++ G+GV ++ +A+ + K A +G A +
Sbjct: 42 LRPFAEQENPFAEQKNAAAQALL--GVMYEFGQGVPQDYTEAVSWYRKAAEQGVDFAQKN 99
Query: 143 AGLMY---WEMDKKEA-AISLYRQAAVLGDPAGQFNLGISY------LQE--EAVKLLYQ 190
G MY W + + +A A+S YR+AA G Q NLG Y +Q+ EAV +
Sbjct: 100 LGNMYANGWGVPQDDAEAVSWYRKAAEQGFADAQHNLGFMYENGRGVIQDYTEAVSWYRR 159
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G AQ L G+GV + EA WY +AAE G RA +N Y G G+P
Sbjct: 160 AAEQGFADAQTNLGFMYENGQGVLQDYTEAVNWYRKAAEQGLARAQFNLGNMYKNGRGVP 219
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+ +A W ++AA+ G KAQ GL ++ G+
Sbjct: 220 QDYAEAVSWYRKAAEQGEAKAQTNLGL-MYKNGQ 252
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 16/224 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G GV ++ +A+ + K A +G A + G MY + A+S YR+A
Sbjct: 101 GNMYANGWGVPQDDAEAVSWYRKAAEQGFADAQHNLGFMYENGRGVIQDYTEAVSWYRRA 160
Query: 164 AVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG Y LQ+ EAV +A+ G RAQ+ L GRGV
Sbjct: 161 AEQGFADAQTNLGFMYENGQGVLQDYTEAVNWYRKAAEQGLARAQFNLGNMYKNGRGVPQ 220
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA WY +AAE G +A N L Y G+G+ + +A W ++AA+ G+ AQ
Sbjct: 221 DYAEAVSWYRKAAEQGEAKAQTNLGLMYKNGQGVLQDYAEAVSWYRKAAEQGNAVAQANL 280
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 315
G LG + + A ++ + G +++I ++++
Sbjct: 281 GNMYALGRGVIQDNILAHMWFNIGGANGNEIGSENRDIIAEEMT 324
>gi|303325650|ref|ZP_07356093.1| TPR repeat protein [Desulfovibrio sp. 3_1_syn3]
gi|302863566|gb|EFL86497.1| TPR repeat protein [Desulfovibrio sp. 3_1_syn3]
Length = 345
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKKE-AAISLYRQ 162
WG G+GVR+N +A F K A +G +A + G +Y + K E AAI Y +
Sbjct: 103 WGTAQASGQGVRRNYREAARWFRKAAEQGLAMAQYNLGYLYAYGRGVPKDENAAIDWYSR 162
Query: 163 AAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q++LG +YL + AV +A+ +++AQ LA GRG
Sbjct: 163 AANQGLADAQYSLGWTYLNSKGENQSDTKAVHWFEKAAEQDNLKAQNNLAYMYAEGRGYA 222
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A +WY RAAE GY A YN Y G G+P + +A +W ++AA+ AQ
Sbjct: 223 QDPVKAVQWYNRAAERGYAEAQYNLGFMYEQGRGVPQDYNKAVEWYRKAAEQNEPAAQYS 282
Query: 275 HGLGLFTEG-----EMMKAVVYLELATRAGETAADHV 306
GL ++ +G + +A + LA + G+ A V
Sbjct: 283 LGL-MYDQGTGVPRNLSEATRWYRLAAKNGDPDAKAV 318
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ ++ A +L QA+ G + AQ G+GV N +EAARW+ +AAE G A
Sbjct: 76 GVKKSEQRAAQLFRQAAEKGDISAQNAWGTAQASGQGVRRNYREAARWFRKAAEQGLAMA 135
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMM---KAVVY 291
YN Y++G G+P A W RAA+ G AQ G L ++GE KAV +
Sbjct: 136 QYNLGYLYAYGRGVPKDENAAIDWYSRAANQGLADAQYSLGWTYLNSKGENQSDTKAVHW 195
Query: 292 LELAT 296
E A
Sbjct: 196 FEKAA 200
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 164 AVLGDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
A L D AG + +++ +AV LL + G+ A Y L G+GV + Q
Sbjct: 24 AALADEAGDLRNAQAAIEKADYGKAVALLKPLADKGNAEALYVLGRLTLDGKGVKKSEQR 83
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
AA+ + +AAE G + A + G+G+ ++R+A +W ++AA+ G AQ G
Sbjct: 84 AAQLFRQAAEKGDISAQNAWGTAQASGQGVRRNYREAARWFRKAAEQGLAMAQYNLG 140
>gi|306814141|ref|ZP_07448309.1| hypothetical protein ECNC101_18901 [Escherichia coli NC101]
gi|432513295|ref|ZP_19750530.1| hypothetical protein A17M_01152 [Escherichia coli KTE224]
gi|432698408|ref|ZP_19933573.1| hypothetical protein A31M_01154 [Escherichia coli KTE169]
gi|432745027|ref|ZP_19979725.1| hypothetical protein WGG_01152 [Escherichia coli KTE43]
gi|432971215|ref|ZP_20160090.1| hypothetical protein A15O_01786 [Escherichia coli KTE207]
gi|433082886|ref|ZP_20269350.1| hypothetical protein WIW_02035 [Escherichia coli KTE133]
gi|433144595|ref|ZP_20329741.1| hypothetical protein WKO_02130 [Escherichia coli KTE168]
gi|305852506|gb|EFM52956.1| hypothetical protein ECNC101_18901 [Escherichia coli NC101]
gi|431044334|gb|ELD54614.1| hypothetical protein A17M_01152 [Escherichia coli KTE224]
gi|431245732|gb|ELF40011.1| hypothetical protein A31M_01154 [Escherichia coli KTE169]
gi|431294003|gb|ELF84285.1| hypothetical protein WGG_01152 [Escherichia coli KTE43]
gi|431485471|gb|ELH65133.1| hypothetical protein A15O_01786 [Escherichia coli KTE207]
gi|431602493|gb|ELI71925.1| hypothetical protein WIW_02035 [Escherichia coli KTE133]
gi|431662072|gb|ELJ28881.1| hypothetical protein WKO_02130 [Escherichia coli KTE168]
Length = 378
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 17/198 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 115 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 172
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALC 206
A S Y +AA P QF LGI Y V+ YQ A+ AQ+ L +
Sbjct: 173 AK-SWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGML 231
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++G GV N ++A W+ +AA + A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 232 YYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAAEK 291
Query: 267 GHGKAQLEHGLGLFTEGE 284
GH AQ G+ ++ GE
Sbjct: 292 GHVDAQYNLGV-IYENGE 308
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G GV ++ +A + K AA+ S A G++Y E D ++A Y +AA
Sbjct: 160 YAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAK-DWYEKAAE 218
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
QFNLG+ Y + E VK + +A+ + AQY L + G+GV +
Sbjct: 219 QNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSY 278
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA +AQ E L
Sbjct: 279 RQAKYWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE--L 336
Query: 278 GLFTE 282
G+ E
Sbjct: 337 GVMNE 341
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 18/195 (9%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 173 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 232
Query: 148 WEMDKKEAAISLYRQA-------AVLGDPAGQFNLGISYLQEEAVKLLY--------QAS 192
+ K E +RQA A Q+NLG Y + V Y +A+
Sbjct: 233 Y---KGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAA 289
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
GHV AQY L + G GV N Q+A WY +AA +A + + G+G +
Sbjct: 290 EKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESID 349
Query: 253 HRQARKWMKRAADCG 267
+QAR + +R+ + G
Sbjct: 350 LKQARHYYERSCNNG 364
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLG 176
D L S G A GLMY ++D ++A I Y +AA DP Q LG
Sbjct: 27 DSTLSSLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAADQNDPRAQAKLG 85
Query: 177 ISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+ Y V YQ A+ V AQ+ L G GV + Q A WY +AA
Sbjct: 86 VMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQFLLGEMYDDGLGVSQDYQHAKMWYEKAA 145
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
RA N ++ Y+ G G+ +RQA+ W ++AA AQ G+
Sbjct: 146 AQNDERAQVNLAVLYAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGI 194
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 145 LMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGH 196
+ Y + +++ +S + A GD Q+ LG+ YL E + + YQ A+
Sbjct: 18 IFYIAISDRDSTLSSLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAADQND 77
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
RAQ +L + G GV+ + Q++ WY +AA V A + Y G G+ ++ A
Sbjct: 78 PRAQAKLGVMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQFLLGEMYDDGLGVSQDYQHA 137
Query: 257 RKWMKRAADCGHGKAQL 273
+ W ++AA +AQ+
Sbjct: 138 KMWYEKAAAQNDERAQV 154
>gi|343504481|ref|ZP_08742194.1| Sel1 domain-containing protein [Vibrio ichthyoenteri ATCC 700023]
gi|342811471|gb|EGU46509.1| Sel1 domain-containing protein [Vibrio ichthyoenteri ATCC 700023]
Length = 443
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 16/224 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEMDKKE---AAISLY 160
L G+ + +GV +N +AL+ + K A + + A + A ++ + + E AA+ Y
Sbjct: 140 LNVGRMLEFAQGVEENPQQALEWYHKAAEQDNAEAQYNMATMLAYGIGTDEDLGAALYWY 199
Query: 161 RQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
QAA Q+++ GI + EA+K A+ GHV AQY LA+ L+ G G
Sbjct: 200 YQAAEQNHLEAQYSVALMLELGKGIEKDKSEAIKWYLIAAQQGHVEAQYNLAMMLYFGIG 259
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N Q+A W+L+AAE G++ A YN + Y FG G+ + +A W AA+ GH AQ
Sbjct: 260 TSENKQDAFIWHLKAAEQGHIEAQYNVGMMYDFGLGVEPNKTKALIWYHNAAENGHADAQ 319
Query: 273 LE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 312
+ LG+ T +A + A + G AA + V+L+
Sbjct: 320 FSLASLYELGVGTPVNKKEAYRWYVKAAKQGSVAAQYNLGVMLE 363
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAV 165
+ HG G+ +N A +LK A +G A ++ G M E + + A+ Y +AA
Sbjct: 110 YYHGDGIAENRAMAFHWYLKAAEQGHAKAQLNVGRML-EFAQGVEENPQQALEWYHKAAE 168
Query: 166 LGDPAGQFNL------GISYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+ Q+N+ GI ++ A+ YQA+ H+ AQY +AL L G+G++ +
Sbjct: 169 QDNAEAQYNMATMLAYGIGTDEDLGAALYWYYQAAEQNHLEAQYSVALMLELGKGIEKDK 228
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
EA +WYL AA+ G+V A YN ++ FG G + + A W +AA+ GH +AQ G+
Sbjct: 229 SEAIKWYLIAAQQGHVEAQYNLAMMLYFGIGTSENKQDAFIWHLKAAEQGHIEAQYNVGM 288
Query: 278 ----GLFTEGEMMKAVVYLELATRAGETAA 303
GL E KA+++ A G A
Sbjct: 289 MYDFGLGVEPNKTKALIWYHNAAENGHADA 318
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G G +N A LK A +G A + G+MY E +K +A I Y AA G
Sbjct: 257 GIGTSENKQDAFIWHLKAAEQGHIEAQYNVGMMYDFGLGVEPNKTKALI-WYHNAAENGH 315
Query: 169 PAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
QF+L G ++EA + +A+ G V AQY L + L G+G++ N+ EA
Sbjct: 316 ADAQFSLASLYELGVGTPVNKKEAYRWYVKAAKQGSVAAQYNLGVMLEAGKGIEQNIDEA 375
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
WY AAE G V + Y Y + A W ++AA GH KAQ
Sbjct: 376 IAWYTMAAEQGDVESQYILGTLYGAENDEFENQHLAMMWYQKAAKQGHEKAQ 427
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 16/185 (8%)
Query: 152 KKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQL 203
K A L+ QAA G Q+ LG Y + +A + + +A+ G+VRAQY L
Sbjct: 47 NKNKAFELFSQAAKDGHSEAQYYLGHMYYFGETTPVDKAQATRWMEKAAEQGNVRAQYHL 106
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
A + G G+ N A WYL+AAE G+ +A N F +G+ + +QA +W +A
Sbjct: 107 ATMYYHGDGIAENRAMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENPQQALEWYHKA 166
Query: 264 ADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 317
A+ + +AQ L +G+G T+ ++ A+ + A A + ++L+
Sbjct: 167 AEQDNAEAQYNMATMLAYGIG--TDEDLGAALYWYYQAAEQNHLEAQYSVALMLELGKGI 224
Query: 318 SRDRA 322
+D++
Sbjct: 225 EKDKS 229
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEAAISLYRQAAVLGDP 169
G+G+ K+ +A+ +L A +G A + +M + + K+ A + +AA G
Sbjct: 221 GKGIEKDKSEAIKWYLIAAQQGHVEAQYNLAMMLYFGIGTSENKQDAFIWHLKAAEQGHI 280
Query: 170 AGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+N+G+ Y + +A+ + A+ GH AQ+ LA G G N +EA
Sbjct: 281 EAQYNVGMMYDFGLGVEPNKTKALIWYHNAAENGHADAQFSLASLYELGVGTPVNKKEAY 340
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
RWY++AA+ G V A YN + G+G+ + +A W AA+ G ++Q
Sbjct: 341 RWYVKAAKQGSVAAQYNLGVMLEAGKGIEQNIDEAIAWYTMAAEQGDVESQ 391
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F G S + +A +L QA+ GH AQY L + G + +A RW +AAE G
Sbjct: 40 FGNGASINKNKAFELFSQAAKDGHSEAQYYLGHMYYFGETTPVDKAQATRWMEKAAEQGN 99
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
VRA Y+ + Y G+G+ + A W +AA+ GH KAQL G
Sbjct: 100 VRAQYHLATMYYHGDGIAENRAMAFHWYLKAAEQGHAKAQLNVG 143
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y L + + G G N +A + +AA+ G+ A Y Y FGE P+ QA +WM
Sbjct: 32 YDLGVQYYFGNGASINKNKAFELFSQAAKDGHSEAQYYLGHMYYFGETTPVDKAQATRWM 91
Query: 261 KRAADCGHGKAQLE------HGLGL 279
++AA+ G+ +AQ HG G+
Sbjct: 92 EKAAEQGNVRAQYHLATMYYHGDGI 116
>gi|91210161|ref|YP_540147.1| hypothetical protein UTI89_C1133 [Escherichia coli UTI89]
gi|386605031|ref|YP_006111331.1| hypothetical protein UM146_12250 [Escherichia coli UM146]
gi|432553054|ref|ZP_19789783.1| hypothetical protein A1S3_01445 [Escherichia coli KTE47]
gi|432573037|ref|ZP_19809527.1| hypothetical protein A1SI_01731 [Escherichia coli KTE55]
gi|91071735|gb|ABE06616.1| hypothetical protein UTI89_C1133 [Escherichia coli UTI89]
gi|307627515|gb|ADN71819.1| hypothetical protein UM146_12250 [Escherichia coli UM146]
gi|431085771|gb|ELD91875.1| hypothetical protein A1S3_01445 [Escherichia coli KTE47]
gi|431110245|gb|ELE14172.1| hypothetical protein A1SI_01731 [Escherichia coli KTE55]
Length = 378
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 17/198 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 115 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 172
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALC 206
A S Y +AA P QF LGI Y V+ YQ A+ AQ+ L +
Sbjct: 173 AK-SWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGML 231
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++G GV N ++A W+ +AA + A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 232 YYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAAEK 291
Query: 267 GHGKAQLEHGLGLFTEGE 284
GH AQ G+ ++ GE
Sbjct: 292 GHVDAQYNLGV-IYENGE 308
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G GV ++ +A + K AA+ S A G++Y E D ++A Y +AA
Sbjct: 160 YAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAK-DWYEKAAE 218
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
QFNLG+ Y + E VK + +A+ + AQY L + G+GV +
Sbjct: 219 QNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSY 278
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA +AQ E L
Sbjct: 279 RQAKYWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE--L 336
Query: 278 GLFTE 282
G+ E
Sbjct: 337 GVMNE 341
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 18/195 (9%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 173 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 232
Query: 148 WEMDKKEAAISLYRQA-------AVLGDPAGQFNLGISYLQEEAVKLLY--------QAS 192
+ K E +RQA A Q+NLG Y + V Y +A+
Sbjct: 233 Y---KGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAA 289
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
GHV AQY L + G GV N Q+A WY +AA +A + + G+G +
Sbjct: 290 EKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESID 349
Query: 253 HRQARKWMKRAADCG 267
+QAR + +R+ + G
Sbjct: 350 LKQARHYYERSCNNG 364
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 71/169 (42%), Gaps = 14/169 (8%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLG 176
D L G A GLMY ++D ++A I Y +AA DP Q LG
Sbjct: 27 DSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAADQNDPRAQAKLG 85
Query: 177 ISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+ Y V YQ A+ V AQ+ L G GV + Q A WY +AA
Sbjct: 86 VMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQFLLGEMYDDGLGVSQDYQHAKMWYEKAA 145
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
RA N ++ Y+ G G+ +RQA+ W ++AA AQ G+
Sbjct: 146 AQNDERAQVNLAVLYAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGI 194
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 145 LMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGH 196
+ Y + +++ +S + A GD Q+ LG+ YL E + + YQ A+
Sbjct: 18 IFYIAISDRDSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAADQND 77
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
RAQ +L + G GV+ + Q++ WY +AA V A + Y G G+ ++ A
Sbjct: 78 PRAQAKLGVMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQFLLGEMYDDGLGVSQDYQHA 137
Query: 257 RKWMKRAADCGHGKAQL 273
+ W ++AA +AQ+
Sbjct: 138 KMWYEKAAAQNDERAQV 154
>gi|294661289|ref|YP_003573165.1| hypothetical protein Aasi_1767 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336440|gb|ACP21037.1| hypothetical protein Aasi_1767 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1037
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+ V N AL + K A +G A MY E +K E A+ Y +A
Sbjct: 392 GDIYYFGKIVSCNYQNALKWYKKAAGKGYAKAQNALAYMYEEGLGIQNKSERAVEWYTKA 451
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A+ G+ Q+NLG Y + V+ Y +A+ G+++AQ +L +G G++
Sbjct: 452 AMQGNITAQYNLGRIYYNGKGVRRAYNKAFKWYHKAANQGNIKAQTKLGYMYAKGLGIEQ 511
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 272
NL + +WY +AA G + A + L Y GEG+ + +A +W +AA+ G KAQ
Sbjct: 512 NLGNSVKWYNKAANKGNITAQFKLGLLYKKGEGVAQDYHKASEWFTKAANQGLVKAQYSL 571
Query: 273 --LEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
L + LG E +A +L A G A
Sbjct: 572 GCLYYNLGESIEHNYQQAFKWLSKAANEGHAEA 604
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYR 161
+ G + G G+ +NL ++ + K A +G+ A GL+Y + + A +
Sbjct: 498 KLGYMYAKGLGIEQNLGNSVKWYNKAANKGNITAQFKLGLLYKKGEGVAQDYHKASEWFT 557
Query: 162 QAAVLGDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+AA G Q++LG Y ++A K L +A+ GH AQ+ LA G G
Sbjct: 558 KAANQGLVKAQYSLGCLYYNLGESIEHNYQQAFKWLSKAANEGHAEAQFSLARLFEDGLG 617
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V+ + QEA W+ +AA G V+A Y+ L Y E + + +A +W +AA+ AQ
Sbjct: 618 VEQDKQEAIEWFTKAANQGLVKAQYSLGLLYETDEDIGHDYHKAFEWYSKAANQNDAVAQ 677
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
GL E + +A+ + A + G A + +I ++ R+
Sbjct: 678 SSLAFLFIDGLGVERNVQQAIEWFTKAAQQGVVEAQYNLGIIYKRGEDIERN 729
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 53/240 (22%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISL 159
+ G +K G GV ++ KA + F K A +G A G +Y+ + + + A
Sbjct: 533 FKLGLLYKKGEGVAQDYHKASEWFTKAANQGLVKAQYSLGCLYYNLGESIEHNYQQAFKW 592
Query: 160 YRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCL---- 207
+AA G QF+L G+ ++EA++ +A+ G V+AQY L L
Sbjct: 593 LSKAANEGHAEAQFSLARLFEDGLGVEQDKQEAIEWFTKAANQGLVKAQYSLGLLYETDE 652
Query: 208 ------HR--------------------------GRGVDFNLQEAARWYLRAAEGGYVRA 235
H+ G GV+ N+Q+A W+ +AA+ G V A
Sbjct: 653 DIGHDYHKAFEWYSKAANQNDAVAQSSLAFLFIDGLGVERNVQQAIEWFTKAAQQGVVEA 712
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVY 291
YN + Y GE + +++++ +W +AA G AQ + G GL E ++ +A+ +
Sbjct: 713 QYNLGIIYKRGEDIERNYQKSFEWFTKAASQGSVAAQNKLGSIYKKGLGREKDLSQAIFW 772
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ---LALCL-----HRGRG 212
++ A GDP Q NLG Y + + + +I + +A +Q +A CL + G+
Sbjct: 341 KEQAQAGDPLAQTNLGYMYSEGLGFPVDARKAIEWYTKAAHQEFAIAQCLLGDIYYFGKI 400
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR--KWMKRAADCGHGK 270
V N Q A +WY +AA GY +A +L Y + EGL + ++ R +W +AA G+
Sbjct: 401 VSCNYQNALKWYKKAAGKGYAKA--QNALAYMYEEGLGIQNKSERAVEWYTKAAMQGNIT 458
Query: 271 AQLEHG 276
AQ G
Sbjct: 459 AQYNLG 464
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
AG AQ L G G + ++A WY +AA + A Y FG+ + ++
Sbjct: 346 AGDPLAQTNLGYMYSEGLGFPVDARKAIEWYTKAAHQEFAIAQCLLGDIYYFGKIVSCNY 405
Query: 254 RQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 305
+ A KW K+AA G+ KAQ E GLG+ + E +AV + A G A +
Sbjct: 406 QNALKWYKKAAGKGYAKAQNALAYMYEEGLGIQNKSE--RAVEWYTKAAMQGNITAQY 461
>gi|242278361|ref|YP_002990490.1| Sel1 domain-containing protein repeat-containing protein
[Desulfovibrio salexigens DSM 2638]
gi|242121255|gb|ACS78951.1| Sel1 domain protein repeat-containing protein [Desulfovibrio
salexigens DSM 2638]
Length = 487
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 12/175 (6%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAV 165
++ HG+GV++NL +A+ + K A +G ++A MY E +DK A A+ YR+AA
Sbjct: 53 KYSHGKGVKQNLTEAVKWYRKSAKQGDSIAQWSLAFMYEEGTGVDKNLAKAVKWYRKAAE 112
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD GQ+ LG Y+ EAV+ +++ G+ Q++L + GV+ N
Sbjct: 113 QGDSDGQWLLGTMYMYGKGVGKKLSEAVRWFRKSAEQGNYGGQWRLGVMYEYQMGVERNF 172
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
EAA+WY +AAE G + + Y FG G+ + +A W ++AA+ G AQ
Sbjct: 173 AEAAKWYRKAAEQGASDGQWRLARMYEFGNGVDKNLSEAVSWYRKAAEQGDPDAQ 227
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 14/180 (7%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLY 160
R G +++ GV KNL +A++ + K A +G++ G MY + D EAA L+
Sbjct: 301 RLGVMYEYSEGVEKNLFEAVEWYKKSAEQGNSGGQWRLGNMYKFGRGVDEDINEAA-KLF 359
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R++A GD GQ LGI Y EAVK ++A+ G +Q++L +G G
Sbjct: 360 RKSAEQGDSGGQLRLGIVYEYGEGVEKNFAEAVKWYHRAADQGESESQWRLGKMYKQGLG 419
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
VD NL EA +W+ ++AE G + ++ Y FGEG+ +A KW ++AA G+G A+
Sbjct: 420 VDKNLFEAVKWFKKSAELGDFEGQWRLAIAYEFGEGVEEDITEAVKWYRKAAAQGYGPAK 479
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM------DKKEAAISLYRQAA 164
++ G GV KNL KA+ + K A +G + G MY M K A+ +R++A
Sbjct: 90 YEEGTGVDKNLAKAVKWYRKAAEQGDSDGQWLLGTMY--MYGKGVGKKLSEAVRWFRKSA 147
Query: 165 VLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
G+ GQ+ LG+ Y + EA K +A+ G Q++LA G GVD N
Sbjct: 148 EQGNYGGQWRLGVMYEYQMGVERNFAEAAKWYRKAAEQGASDGQWRLARMYEFGNGVDKN 207
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ---- 272
L EA WY +AAE G A + Y++G G+ + +A KW K++A G Q
Sbjct: 208 LSEAVSWYRKAAEQGDPDAQWLLGKMYAYGFGVDQNFFEAVKWYKKSAVQGASVGQWIIS 267
Query: 273 --LEHGLGLFTEGEMMKAVVYLELATRAGET 301
++G G TE ++A+ + ++ G++
Sbjct: 268 DMYKYGKG--TEKNFVEAIKWARMSAEQGDS 296
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
GK + +G GV +N +A+ + K A +G+++ MY E AI R +
Sbjct: 231 GKMYAYGFGVDQNFFEAVKWYKKSAVQGASVGQWIISDMYKYGKGTEKNFVEAIKWARMS 290
Query: 164 AVLGDPAGQFNLGISYLQEEAV-KLLYQA-------SIAGHVRAQYQLALCLHRGRGVDF 215
A GD GQ+ LG+ Y E V K L++A + G+ Q++L GRGVD
Sbjct: 291 AEQGDSNGQWRLGVMYEYSEGVEKNLFEAVEWYKKSAEQGNSGGQWRLGNMYKFGRGVDE 350
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
++ EAA+ + ++AE G + Y +GEG+ + +A KW RAAD G ++Q
Sbjct: 351 DINEAAKLFRKSAEQGDSGGQLRLGIVYEYGEGVEKNFAEAVKWYHRAADQGESESQWRL 410
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGE 300
G GL + + +AV + + + G+
Sbjct: 411 GKMYKQGLGVDKNLFEAVKWFKKSAELGD 439
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G+GV K L +A+ F K A +G+ G+MY E + EAA YR+
Sbjct: 123 GTMYMYGKGVGKKLSEAVRWFRKSAEQGNYGGQWRLGVMYEYQMGVERNFAEAA-KWYRK 181
Query: 163 AAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G GQ+ L G+ EAV +A+ G AQ+ L G GVD
Sbjct: 182 AAEQGASDGQWRLARMYEFGNGVDKNLSEAVSWYRKAAEQGDPDAQWLLGKMYAYGFGVD 241
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N EA +WY ++A G + S Y +G+G + +A KW + +A+ G Q
Sbjct: 242 QNFFEAVKWYKKSAVQGASVGQWIISDMYKYGKGTEKNFVEAIKWARMSAEQGDSNGQWR 301
Query: 275 HGLGL-FTEG---EMMKAVVYLELATRAGETAA 303
G+ ++EG + +AV + + + G +
Sbjct: 302 LGVMYEYSEGVEKNLFEAVEWYKKSAEQGNSGG 334
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
EAVK +++ G AQ+ LA G GVD NL +A +WY +AAE G +
Sbjct: 66 EAVKWYRKSAKQGDSIAQWSLAFMYEEGTGVDKNLAKAVKWYRKAAEQGDSDGQWLLGTM 125
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 285
Y +G+G+ +A +W +++A+ G+ Q LG+ E +M
Sbjct: 126 YMYGKGVGKKLSEAVRWFRKSAEQGNYGGQWR--LGVMYEYQM 166
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
GH AQ +LA G+GV NL EA +WY ++A+ G A ++ + Y G G+ +
Sbjct: 42 GHSIAQRRLAYKYSHGKGVKQNLTEAVKWYRKSAKQGDSIAQWSLAFMYEEGTGVDKNLA 101
Query: 255 QARKWMKRAADCGHGKAQ 272
+A KW ++AA+ G Q
Sbjct: 102 KAVKWYRKAAEQGDSDGQ 119
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 32/132 (24%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLY 160
LR G +++G GV KN +A+ + + A +G + + G MY + +DK A+ +
Sbjct: 372 LRLGIVYEYGEGVEKNFAEAVKWYHRAADQGESESQWRLGKMYKQGLGVDKNLFEAVKWF 431
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
+++A LGD GQ+ L I+Y G GV+ ++ EA
Sbjct: 432 KKSAELGDFEGQWRLAIAY----------------------------EFGEGVEEDITEA 463
Query: 221 ARWYLRAAEGGY 232
+WY +AA GY
Sbjct: 464 VKWYRKAAAQGY 475
>gi|329118664|ref|ZP_08247367.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465222|gb|EGF11504.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 328
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL- 166
G + G+GV KN +A + K A +G A ++ GLMY YRQAA
Sbjct: 96 GLMYDKGQGVAKNDRQAAAWYQKAANQGDADAQLNLGLMY---ANGRGVAKNYRQAAAWW 152
Query: 167 ------GDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRG 212
GD Q+NLG+ Y V Y+ + A G+ AQY L L + G+G
Sbjct: 153 QKAADQGDAEAQYNLGLMYDNGRGVAKNYRQAAAWYQKAADQGNADAQYNLGLMYYNGQG 212
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V N ++AA WY +AA G A +N L Y G+G+ + RQA W ++AA+ GH KAQ
Sbjct: 213 VAQNYRQAAAWYQKAANQGDAAAQFNLGLMYDNGQGVAQNDRQAAAWYQKAANQGHAKAQ 272
Query: 273 LEHGLGLFTEGEMM 286
G+ ++ G+ M
Sbjct: 273 YNLGV-MYYNGQGM 285
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A L G + +GRGV KN +A + K A +G A + GLMY D
Sbjct: 124 DADAQLNLGLMYANGRGVAKNYRQAAAWWQKAADQGDAEAQYNLGLMY---DNGRGVAKN 180
Query: 160 YRQAAVL-------GDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLA 204
YRQAA G+ Q+NLG+ Y + V Y+ + A G AQ+ L
Sbjct: 181 YRQAAAWYQKAADQGNADAQYNLGLMYYNGQGVAQNYRQAAAWYQKAANQGDAAAQFNLG 240
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L G+GV N ++AA WY +AA G+ +A YN + Y G+G+ ++RQA W K+
Sbjct: 241 LMYDNGQGVAQNDRQAAAWYQKAANQGHAKAQYNLGVMYYNGQGMARNYRQAAAWYKK 298
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 50/214 (23%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVK--------------------------LLY 189
A+ L++ A G+ QF LG+ Y + + V L+Y
Sbjct: 76 ALRLWQPLAQKGNAEAQFALGLMYDKGQGVAKNDRQAAAWYQKAANQGDADAQLNLGLMY 135
Query: 190 ------------------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
+A+ G AQY L L GRGV N ++AA WY +AA+ G
Sbjct: 136 ANGRGVAKNYRQAAAWWQKAADQGDAEAQYNLGLMYDNGRGVAKNYRQAAAWYQKAADQG 195
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM----- 286
A YN L Y G+G+ ++RQA W ++AA+ G AQ GL ++ G+ +
Sbjct: 196 NADAQYNLGLMYYNGQGVAQNYRQAAAWYQKAANQGDAAAQFNLGL-MYDNGQGVAQNDR 254
Query: 287 KAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+A + + A G A + V+ +R+
Sbjct: 255 QAAAWYQKAANQGHAKAQYNLGVMYYNGQGMARN 288
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 46/181 (25%)
Query: 168 DPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
D QF G + Q +A++L + G+ AQ+ L L +G+GV N ++AA W
Sbjct: 56 DDHAQFQQGYTAYQAGNYAQALRLWQPLAQKGNAEAQFALGLMYDKGQGVAKNDRQAAAW 115
Query: 224 YLRAA------------------------------------EGGYVRAMYNTSLCYSFGE 247
Y +AA + G A YN L Y G
Sbjct: 116 YQKAANQGDADAQLNLGLMYANGRGVAKNYRQAAAWWQKAADQGDAEAQYNLGLMYDNGR 175
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETA 302
G+ ++RQA W ++AAD G+ AQ GL ++ G+ + +A + + A G+ A
Sbjct: 176 GVAKNYRQAAAWYQKAADQGNADAQYNLGL-MYYNGQGVAQNYRQAAAWYQKAANQGDAA 234
Query: 303 A 303
A
Sbjct: 235 A 235
>gi|333030530|ref|ZP_08458591.1| Sel1 domain protein repeat-containing protein [Bacteroides
coprosuis DSM 18011]
gi|332741127|gb|EGJ71609.1| Sel1 domain protein repeat-containing protein [Bacteroides
coprosuis DSM 18011]
Length = 209
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 93/178 (52%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R+ +G+GV KN +A + F+K A +G+ +A G++Y E++ K AA Y++
Sbjct: 23 GLRYSYGKGVTKNYKEAFNWFVKSAKQGNVMAQNGLGVLYSSGKGVELNYKNAA-RWYKK 81
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA LGDP QFNL + Y EEA+ +A++ G AQ L + +G GV+
Sbjct: 82 AAELGDPYAQFNLAVLYKNGLGVPLNLEEALDWFREAAMQGDSAAQNNLGIMYKKGEGVE 141
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N ++A W+ +AAE G V+A N Y G G+ +A + AA G KA+
Sbjct: 142 VNYEKAFHWFKKAAEQGDVKAEANLGEMYEDGLGVKCDLEKAYACYQNAAAKGSPKAK 199
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
+ G++ +EA +++ G+V AQ L + G+GV+ N + AARWY +AAE G
Sbjct: 28 YGKGVTKNYKEAFNWFVKSAKQGNVMAQNGLGVLYSSGKGVELNYKNAARWYKKAAELGD 87
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----K 287
A +N ++ Y G G+PL+ +A W + AA G AQ G+ ++ +GE + K
Sbjct: 88 PYAQFNLAVLYKNGLGVPLNLEEALDWFREAAMQGDSAAQNNLGI-MYKKGEGVEVNYEK 146
Query: 288 AVVYLELATRAGETAAD 304
A + + A G+ A+
Sbjct: 147 AFHWFKKAAEQGDVKAE 163
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
AG AQY+L L G+GV N +EA W++++A+ G V A + YS G+G+ L++
Sbjct: 13 AGCADAQYELGLRYSYGKGVTKNYKEAFNWFVKSAKQGNVMAQNGLGVLYSSGKGVELNY 72
Query: 254 RQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAADHVK 307
+ A +W K+AA+ G AQ ++GLG+ + +A+ + A G++AA +
Sbjct: 73 KNAARWYKKAAELGDPYAQFNLAVLYKNGLGVPL--NLEEALDWFREAAMQGDSAAQNNL 130
Query: 308 NVILQQ 313
++ ++
Sbjct: 131 GIMYKK 136
>gi|386638523|ref|YP_006105321.1| hypothetical protein ECABU_c12240 [Escherichia coli ABU 83972]
gi|442603690|ref|ZP_21018559.1| FIG00639943: hypothetical protein [Escherichia coli Nissle 1917]
gi|307553015|gb|ADN45790.1| conserved hypothetical protein [Escherichia coli ABU 83972]
gi|441715593|emb|CCQ04536.1| FIG00639943: hypothetical protein [Escherichia coli Nissle 1917]
Length = 328
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 65 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 122
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALC 206
A S Y +AA P QF LGI Y V+ YQ A+ AQ+ L +
Sbjct: 123 AK-SWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGML 181
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++G GV N ++A W+ +AA A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 182 YYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEK 241
Query: 267 GHGKAQLEHGLGLFTEGE 284
GH AQ G+ ++ GE
Sbjct: 242 GHVDAQYNLGV-IYENGE 258
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G GV ++ +A + K AA+ S A G++Y E D ++A Y +AA
Sbjct: 110 YAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAK-DWYEKAAE 168
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
QFNLG+ Y + E VK + +A+ AQY L + G+GV +
Sbjct: 169 QNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSY 228
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA +AQ E L
Sbjct: 229 RQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE--L 286
Query: 278 GLFTE 282
G+ E
Sbjct: 287 GVMNE 291
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 18/195 (9%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 123 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 182
Query: 148 WEMDKKEAAISLYRQA-------AVLGDPAGQFNLGISYLQEEAVKLLY--------QAS 192
+ K E +RQA A P Q+NLG Y + V Y +A+
Sbjct: 183 Y---KGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAA 239
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
GHV AQY L + G GV N Q+A WY +AA +A + + G+G +
Sbjct: 240 EKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESID 299
Query: 253 HRQARKWMKRAADCG 267
+QAR + +R+ + G
Sbjct: 300 LKQARHYYERSCNNG 314
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQ 200
++D ++A I Y +AA DP Q LG+ Y V YQ A+ V AQ
Sbjct: 9 DVDYQQAKI-WYEKAADQNDPRAQAKLGVMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQ 67
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ L G GV + Q A WY +AA RA N ++ Y+ G G+ +RQA+ W
Sbjct: 68 FLLGEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQAKSWY 127
Query: 261 KRAADCGHGKAQLEHGL 277
++AA AQ G+
Sbjct: 128 EKAAAQNSPDAQFALGI 144
>gi|428165092|gb|EKX34096.1| hypothetical protein GUITHDRAFT_98165 [Guillardia theta CCMP2712]
Length = 347
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ GRGV+K+L K++ + A G A G ++ + + A SL+ +
Sbjct: 159 GVCYEKGRGVQKDLVKSIKYYTNAANAGDASAQYKLGECFYYGRSGLKENFQEAASLFSK 218
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A G Q+ LG+ + + +A L +A+ GH +A+YQ+A C + GRGV+
Sbjct: 219 ACEQGLAKAQYMLGLCHYYGQGVENSESKAADLFLKAAEQGHPQAEYQIAACYYSGRGVE 278
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
NL++A W+ +AA+ + A Y+ CY +G G+P S +A ++ AA+ GH +A+
Sbjct: 279 KNLEKAVEWFEKAAKQSHPVAQYSLGQCYYYGRGVPKSEEKALEYYTMAANQGHAQAKYW 338
Query: 275 HGLGL 279
G+ L
Sbjct: 339 IGIIL 343
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 21/219 (9%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQAAVLGD 168
+GRGV +N+++A+ +LK A +G A G+ Y + + +I Y AA GD
Sbjct: 128 YGRGVDRNIEQAVAWYLKAADQGHVAAEYALGVCYEKGRGVQKDLVKSIKYYTNAANAGD 187
Query: 169 PAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+ Q+ LG + +EA L +A G +AQY L LC + G+GV+ + +
Sbjct: 188 ASAQYKLGECFYYGRSGLKENFQEAASLFSKACEQGLAKAQYMLGLCHYYGQGVENSESK 247
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----- 274
AA +L+AAE G+ +A Y + CY G G+ + +A +W ++AA H AQ
Sbjct: 248 AADLFLKAAEQGHPQAEYQIAACYYSGRGVEKNLEKAVEWFEKAAKQSHPVAQYSLGQCY 307
Query: 275 -HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 312
+G G+ E KA+ Y +A G A + +IL+
Sbjct: 308 YYGRGVPKSEE--KALEYYTMAANQGHAQAKYWIGIILK 344
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 8/118 (6%)
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD F G+S L + EAVK +A+ GH+ AQY L +C++ GRGVD N++
Sbjct: 78 GDVKAMFETGMSLLAGRGCEANESEAVKWYTKAAEKGHLDAQYNLGVCMYYGRGVDRNIE 137
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+A WYL+AA+ G+V A Y +CY G G+ ++ K+ AA+ G AQ + G
Sbjct: 138 QAVAWYLKAADQGHVAAEYALGVCYEKGRGVQKDLVKSIKYYTNAANAGDASAQYKLG 195
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G V+A ++ + L GRG + N EA +WY +AAE G++ A YN +C +G G+ +
Sbjct: 78 GDVKAMFETGMSLLAGRGCEANESEAVKWYTKAAEKGHLDAQYNLGVCMYYGRGVDRNIE 137
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 305
QA W +AAD GH A+ G+ G + +++K++ Y A AG+ +A +
Sbjct: 138 QAVAWYLKAADQGHVAAEYALGVCYEKGRGVQKDLVKSIKYYTNAANAGDASAQY 192
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
++ D A +G AM + G+ E ++ EA + Y +AA G Q+NLG+
Sbjct: 66 ESFDKLKFDAEKGDVKAMFETGMSLLAGRGCEANESEA-VKWYTKAAEKGHLDAQYNLGV 124
Query: 178 SYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
E+AV +A+ GHV A+Y L +C +GRGV +L ++ ++Y AA
Sbjct: 125 CMYYGRGVDRNIEQAVAWYLKAADQGHVAAEYALGVCYEKGRGVQKDLVKSIKYYTNAAN 184
Query: 230 GGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
G A Y C+ +G GL + ++A +A + G KAQ GL
Sbjct: 185 AGDASAQYKLGECFYYGRSGLKENFQEAASLFSKACEQGLAKAQYMLGL 233
>gi|386598823|ref|YP_006100329.1| hypothetical protein ECOK1_1122 [Escherichia coli IHE3034]
gi|294491583|gb|ADE90339.1| conserved hypothetical protein [Escherichia coli IHE3034]
Length = 346
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 17/198 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 83 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 140
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALC 206
A S Y +AA P QF LGI Y V+ YQ A+ AQ+ L +
Sbjct: 141 AK-SWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGML 199
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++G GV N ++A W+ +AA + A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 200 YYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAAEK 259
Query: 267 GHGKAQLEHGLGLFTEGE 284
GH AQ G+ ++ GE
Sbjct: 260 GHVDAQYNLGV-IYENGE 276
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G GV ++ +A + K AA+ S A G++Y E D ++A Y +AA
Sbjct: 128 YAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAK-DWYEKAAE 186
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
QFNLG+ Y + E VK + +A+ + AQY L + G+GV +
Sbjct: 187 QNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSY 246
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA +AQ E L
Sbjct: 247 RQAKYWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE--L 304
Query: 278 GLFTE 282
G+ E
Sbjct: 305 GVMNE 309
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 18/195 (9%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 141 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 200
Query: 148 WEMDKKEAAISLYRQA-------AVLGDPAGQFNLGISYLQEEAVKLLY--------QAS 192
+ K E +RQA A Q+NLG Y + V Y +A+
Sbjct: 201 Y---KGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAA 257
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
GHV AQY L + G GV N Q+A WY +AA +A + + G+G +
Sbjct: 258 EKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESID 317
Query: 253 HRQARKWMKRAADCG 267
+QAR + +R+ + G
Sbjct: 318 LKQARHYYERSCNNG 332
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 134 RGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLL 188
G A GLMY ++D ++A I Y +AA DP Q LG+ Y V
Sbjct: 7 NGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAADQNDPRAQAKLGVMYANGLGVNQD 65
Query: 189 YQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
YQ A+ V AQ+ L G GV + Q A WY +AA RA N +
Sbjct: 66 YQQSKLWYEKAAAQNDVDAQFLLGEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLA 125
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ Y+ G G+ +RQA+ W ++AA AQ G+
Sbjct: 126 VLYAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGI 162
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
A E G V A Y L Y +GE L + ++QA+ W ++AAD +AQ + G+
Sbjct: 4 AGENGDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAADQNDPRAQAKLGV 54
>gi|26247143|ref|NP_753183.1| hypothetical protein c1269 [Escherichia coli CFT073]
gi|227888009|ref|ZP_04005814.1| Sel1 family repeat-containing serine/threonine protein kinase
[Escherichia coli 83972]
gi|300982506|ref|ZP_07176160.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
gi|386628648|ref|YP_006148368.1| hypothetical protein i02_1162 [Escherichia coli str. 'clone D i2']
gi|386633568|ref|YP_006153287.1| hypothetical protein i14_1162 [Escherichia coli str. 'clone D i14']
gi|419915803|ref|ZP_14434149.1| hypothetical protein ECKD1_21452 [Escherichia coli KD1]
gi|432380724|ref|ZP_19623674.1| hypothetical protein WCU_00866 [Escherichia coli KTE15]
gi|432411103|ref|ZP_19653782.1| hypothetical protein WG9_01588 [Escherichia coli KTE39]
gi|432431147|ref|ZP_19673588.1| hypothetical protein A13K_01437 [Escherichia coli KTE187]
gi|432435678|ref|ZP_19678073.1| hypothetical protein A13M_01384 [Escherichia coli KTE188]
gi|432440478|ref|ZP_19682827.1| hypothetical protein A13O_01303 [Escherichia coli KTE189]
gi|432445592|ref|ZP_19687896.1| hypothetical protein A13S_01628 [Escherichia coli KTE191]
gi|432455974|ref|ZP_19698170.1| hypothetical protein A15C_01763 [Escherichia coli KTE201]
gi|432494902|ref|ZP_19736718.1| hypothetical protein A173_02070 [Escherichia coli KTE214]
gi|432503743|ref|ZP_19745477.1| hypothetical protein A17E_00797 [Escherichia coli KTE220]
gi|432526741|ref|ZP_19763843.1| hypothetical protein A17Y_04881 [Escherichia coli KTE230]
gi|432567826|ref|ZP_19804349.1| hypothetical protein A1SE_01403 [Escherichia coli KTE53]
gi|432592153|ref|ZP_19828480.1| hypothetical protein A1SS_01577 [Escherichia coli KTE60]
gi|432606864|ref|ZP_19843055.1| hypothetical protein A1U7_01861 [Escherichia coli KTE67]
gi|432610779|ref|ZP_19846947.1| hypothetical protein A1UG_01133 [Escherichia coli KTE72]
gi|432645537|ref|ZP_19881335.1| hypothetical protein A1W5_01286 [Escherichia coli KTE86]
gi|432654635|ref|ZP_19890352.1| hypothetical protein A1WE_00742 [Escherichia coli KTE93]
gi|432843551|ref|ZP_20076734.1| hypothetical protein A1YS_01468 [Escherichia coli KTE141]
gi|432936923|ref|ZP_20135615.1| hypothetical protein A13C_00030 [Escherichia coli KTE183]
gi|432999249|ref|ZP_20187786.1| hypothetical protein A17K_01587 [Escherichia coli KTE223]
gi|433014192|ref|ZP_20202549.1| hypothetical protein WI5_02023 [Escherichia coli KTE104]
gi|433026251|ref|ZP_20214206.1| hypothetical protein WI9_04421 [Escherichia coli KTE106]
gi|433058438|ref|ZP_20245495.1| hypothetical protein WIM_02214 [Escherichia coli KTE124]
gi|433127978|ref|ZP_20313504.1| hypothetical protein WKE_04481 [Escherichia coli KTE160]
gi|433139626|ref|ZP_20324894.1| hypothetical protein WKM_01913 [Escherichia coli KTE167]
gi|433148496|ref|ZP_20333550.1| hypothetical protein WKQ_01160 [Escherichia coli KTE174]
gi|433191172|ref|ZP_20375242.1| hypothetical protein WGS_04268 [Escherichia coli KTE88]
gi|433201237|ref|ZP_20385085.1| hypothetical protein WGW_04769 [Escherichia coli KTE94]
gi|433210544|ref|ZP_20394194.1| hypothetical protein WI1_04331 [Escherichia coli KTE97]
gi|433212868|ref|ZP_20396468.1| hypothetical protein WI3_02054 [Escherichia coli KTE99]
gi|433327623|ref|ZP_20403903.1| hypothetical protein B185_024045 [Escherichia coli J96]
gi|26107544|gb|AAN79743.1|AE016759_17 Hypothetical protein c1269 [Escherichia coli CFT073]
gi|47600612|emb|CAE55733.1| hypothetical protein [Escherichia coli Nissle 1917]
gi|227835005|gb|EEJ45471.1| Sel1 family repeat-containing serine/threonine protein kinase
[Escherichia coli 83972]
gi|300408738|gb|EFJ92276.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
gi|355419547|gb|AER83744.1| hypothetical protein i02_1162 [Escherichia coli str. 'clone D i2']
gi|355424467|gb|AER88663.1| hypothetical protein i14_1162 [Escherichia coli str. 'clone D i14']
gi|388383034|gb|EIL44845.1| hypothetical protein ECKD1_21452 [Escherichia coli KD1]
gi|430910211|gb|ELC31565.1| hypothetical protein WCU_00866 [Escherichia coli KTE15]
gi|430937025|gb|ELC57288.1| hypothetical protein WG9_01588 [Escherichia coli KTE39]
gi|430954942|gb|ELC73735.1| hypothetical protein A13K_01437 [Escherichia coli KTE187]
gi|430965352|gb|ELC82777.1| hypothetical protein A13M_01384 [Escherichia coli KTE188]
gi|430968543|gb|ELC85769.1| hypothetical protein A13O_01303 [Escherichia coli KTE189]
gi|430974828|gb|ELC91742.1| hypothetical protein A13S_01628 [Escherichia coli KTE191]
gi|430984203|gb|ELD00844.1| hypothetical protein A15C_01763 [Escherichia coli KTE201]
gi|431027507|gb|ELD40570.1| hypothetical protein A173_02070 [Escherichia coli KTE214]
gi|431041058|gb|ELD51590.1| hypothetical protein A17E_00797 [Escherichia coli KTE220]
gi|431046255|gb|ELD56373.1| hypothetical protein A17Y_04881 [Escherichia coli KTE230]
gi|431102351|gb|ELE07175.1| hypothetical protein A1SE_01403 [Escherichia coli KTE53]
gi|431132069|gb|ELE34085.1| hypothetical protein A1SS_01577 [Escherichia coli KTE60]
gi|431139210|gb|ELE41006.1| hypothetical protein A1U7_01861 [Escherichia coli KTE67]
gi|431150324|gb|ELE51379.1| hypothetical protein A1UG_01133 [Escherichia coli KTE72]
gi|431182255|gb|ELE82076.1| hypothetical protein A1W5_01286 [Escherichia coli KTE86]
gi|431195176|gb|ELE94384.1| hypothetical protein A1WE_00742 [Escherichia coli KTE93]
gi|431396431|gb|ELG79909.1| hypothetical protein A1YS_01468 [Escherichia coli KTE141]
gi|431465878|gb|ELH45958.1| hypothetical protein A13C_00030 [Escherichia coli KTE183]
gi|431513018|gb|ELH91105.1| hypothetical protein A17K_01587 [Escherichia coli KTE223]
gi|431528041|gb|ELI04753.1| hypothetical protein WI9_04421 [Escherichia coli KTE106]
gi|431531485|gb|ELI08148.1| hypothetical protein WI5_02023 [Escherichia coli KTE104]
gi|431570354|gb|ELI43269.1| hypothetical protein WIM_02214 [Escherichia coli KTE124]
gi|431638271|gb|ELJ06311.1| hypothetical protein WKE_04481 [Escherichia coli KTE160]
gi|431660843|gb|ELJ27702.1| hypothetical protein WKM_01913 [Escherichia coli KTE167]
gi|431674795|gb|ELJ40946.1| hypothetical protein WKQ_01160 [Escherichia coli KTE174]
gi|431699777|gb|ELJ64772.1| hypothetical protein WGS_04268 [Escherichia coli KTE88]
gi|431713658|gb|ELJ77882.1| hypothetical protein WGW_04769 [Escherichia coli KTE94]
gi|431726866|gb|ELJ90633.1| hypothetical protein WI1_04331 [Escherichia coli KTE97]
gi|431734656|gb|ELJ98035.1| hypothetical protein WI3_02054 [Escherichia coli KTE99]
gi|432344820|gb|ELL39374.1| hypothetical protein B185_024045 [Escherichia coli J96]
Length = 378
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 115 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 172
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALC 206
A S Y +AA P QF LGI Y V+ YQ A+ AQ+ L +
Sbjct: 173 AK-SWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGML 231
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++G GV N ++A W+ +AA A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 232 YYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEK 291
Query: 267 GHGKAQLEHGLGLFTEGE 284
GH AQ G+ ++ GE
Sbjct: 292 GHVDAQYNLGV-IYENGE 308
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G GV ++ +A + K AA+ S A G++Y E D ++A Y +AA
Sbjct: 160 YAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAK-DWYEKAAE 218
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
QFNLG+ Y + E VK + +A+ AQY L + G+GV +
Sbjct: 219 QNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSY 278
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA +AQ E L
Sbjct: 279 RQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE--L 336
Query: 278 GLFTE 282
G+ E
Sbjct: 337 GVMNE 341
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 18/195 (9%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 173 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 232
Query: 148 WEMDKKEAAISLYRQA-------AVLGDPAGQFNLGISYLQEEAVKLLY--------QAS 192
+ K E +RQA A P Q+NLG Y + V Y +A+
Sbjct: 233 Y---KGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAA 289
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
GHV AQY L + G GV N Q+A WY +AA +A + + G+G +
Sbjct: 290 EKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESID 349
Query: 253 HRQARKWMKRAADCG 267
+QAR + +R+ + G
Sbjct: 350 LKQARHYYERSCNNG 364
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 71/169 (42%), Gaps = 14/169 (8%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLG 176
D L G A GLMY ++D ++A I Y +AA DP Q LG
Sbjct: 27 DSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAADQNDPRAQAKLG 85
Query: 177 ISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+ Y V YQ A+ V AQ+ L G GV + Q A WY +AA
Sbjct: 86 VMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQFLLGEMYDDGLGVSQDYQHAKMWYEKAA 145
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
RA N ++ Y+ G G+ +RQA+ W ++AA AQ G+
Sbjct: 146 AQNDERAQVNLAVLYAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGI 194
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 145 LMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGH 196
+ Y + +++ +S + A GD Q+ LG+ YL E + + YQ A+
Sbjct: 18 IFYIAISDRDSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAADQND 77
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
RAQ +L + G GV+ + Q++ WY +AA V A + Y G G+ ++ A
Sbjct: 78 PRAQAKLGVMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQFLLGEMYDDGLGVSQDYQHA 137
Query: 257 RKWMKRAADCGHGKAQL 273
+ W ++AA +AQ+
Sbjct: 138 KMWYEKAAAQNDERAQV 154
>gi|365919644|ref|ZP_09444017.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
gi|364578945|gb|EHM56126.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
Length = 451
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGD 168
+G GV ++ +ALD + K AA+G A + G MY E E A Y +AA+ GD
Sbjct: 4 NGHGVAQDDRRALDWYQKSAAQGFAAAQCNLGWMYGEGRGVEKNDEQAAYWYEKAAIQGD 63
Query: 169 PAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
Q+NLG Y+ + A QA+ V AQY L RG GV + + A
Sbjct: 64 KQAQYNLGNLYIAGIGVDKDERRAAFWFVQAAQQDDVEAQYNLGNLYFRGEGVTQDDRRA 123
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
ARWY +AA+ GY +A N ++ Y G G+ + A +W AA+ G KAQ L L+
Sbjct: 124 ARWYEKAAQQGYAKAQCNLAMMYERGRGVAQNPEIAAEWYGCAAEQGDSKAQYRLAL-LY 182
Query: 281 TEGE 284
+GE
Sbjct: 183 EKGE 186
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + GRGV KN ++A + K A +G A + G +Y + D++ AA + Q
Sbjct: 35 GWMYGEGRGVEKNDEQAAYWYEKAAIQGDKQAQYNLGNLYIAGIGVDKDERRAAF-WFVQ 93
Query: 163 AAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA D Q+NLG Y + E V + +A+ G+ +AQ LA+ RGRGV
Sbjct: 94 AAQQDDVEAQYNLGNLYFRGEGVTQDDRRAARWYEKAAQQGYAKAQCNLAMMYERGRGVA 153
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
N + AA WY AAE G +A Y +L Y GEG+P A W++ AA
Sbjct: 154 QNPEIAAEWYGCAAEQGDSKAQYRLALLYEKGEGVPQDDNMAYYWLESAA 203
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
QA+ G+ AQY L + G+G++ + AA WY AAE G+ RA Y Y G G+
Sbjct: 354 QAARQGNSDAQYNLGVMYENGQGIEQDYARAAYWYELAAEQGHARAQYQLGNLYREGLGV 413
Query: 250 PLSHRQARKWMKRAADCG 267
+ + W +RAA+ G
Sbjct: 414 KEDPKIMQAWWQRAAEQG 431
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGR 211
+ QAA G+ Q+NLG+ Y + ++ Y A+ GH RAQYQL G
Sbjct: 352 FEQAARQGNSDAQYNLGVMYENGQGIEQDYARAAYWYELAAEQGHARAQYQLGNLYREGL 411
Query: 212 GVDFNLQEAARWYLRAAEGG 231
GV + + W+ RAAE G
Sbjct: 412 GVKEDPKIMQAWWQRAAEQG 431
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 211 RGVD-FN--LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
R +D FN + AA + +AA G A YN + Y G+G+ + +A W + AA+ G
Sbjct: 336 RAIDSFNRAARHAAHSFEQAARQGNSDAQYNLGVMYENGQGIEQDYARAAYWYELAAEQG 395
Query: 268 HGKAQLE------HGLGLFTEGEMMKA 288
H +AQ + GLG+ + ++M+A
Sbjct: 396 HARAQYQLGNLYREGLGVKEDPKIMQA 422
>gi|237747685|ref|ZP_04578165.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379047|gb|EEO29138.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 295
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G +K+G VRK++ + L+ +K A +G A G+ Y+ E D KEA Y +
Sbjct: 75 GLLYKNGVIVRKDIGRGLNLIMKSANQGFARAQNYLGVTYYDGNEVEQDYKEA-FDWYGK 133
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AAV G P ++NL + Y E +K L +A++ AQY L + RG GV
Sbjct: 134 AAVQGYPDAEYNLAVMYGLGKGTRQDFSETIKWLRKAAMHQLPEAQYGLGVMYSRGLGVV 193
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N +++A W+ +AA GY++A + YS G+GL ++A W + AA+ G+ KAQ
Sbjct: 194 KNDEQSAYWFSKAARAGYLKAQNKLGILYSEGKGLEKDEKKAFHWFEAAAEKGYAKAQFN 253
Query: 275 ----HGLGLFTEGEMMKAVVYLELATRAGETAA 303
+ G+ ++ KA+++ A G AA
Sbjct: 254 LAVMYDKGIGVAKDVSKAIMWYRKAATQGNVAA 286
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
R +L+ KS N + + G + G V ++ +A D + K A +G A
Sbjct: 90 RGLNLIMKSANQGFARAQNYL-----GVTYYDGNEVEQDYKEAFDWYGKAAVQGYPDAEY 144
Query: 142 DAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLL 188
+ +MY D E I R+AA+ P Q+ LG+ Y + E++
Sbjct: 145 NLAVMYGLGKGTRQDFSET-IKWLRKAAMHQLPEAQYGLGVMYSRGLGVVKNDEQSAYWF 203
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
+A+ AG+++AQ +L + G+G++ + ++A W+ AAE GY +A +N ++ Y G G
Sbjct: 204 SKAARAGYLKAQNKLGILYSEGKGLEKDEKKAFHWFEAAAEKGYAKAQFNLAVMYDKGIG 263
Query: 249 LPLSHRQARKWMKRAADCGHGKAQ 272
+ +A W ++AA G+ AQ
Sbjct: 264 VAKDVSKAIMWYRKAATQGNVAAQ 287
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLAL 205
+ A+SL+ A DP + LG+ Y V+ L+ +++ G RAQ L +
Sbjct: 53 QQALSLFEAGAKKDDPKSTYALGLLYKNGVIVRKDIGRGLNLIMKSANQGFARAQNYLGV 112
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ G V+ + +EA WY +AA GY A YN ++ Y G+G + KW+++AA
Sbjct: 113 TYYDGNEVEQDYKEAFDWYGKAAVQGYPDAEYNLAVMYGLGKGTRQDFSETIKWLRKAAM 172
Query: 266 CGHGKAQLEHGLGL 279
H + ++GLG+
Sbjct: 173 --HQLPEAQYGLGV 184
>gi|338708080|ref|YP_004662281.1| Sel1 domain-containing protein [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336294884|gb|AEI37991.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
Length = 368
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 16/243 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G+GV K+ AL + A +G +A + G MY++ + AI+ Y+++
Sbjct: 120 GSMYQYGQGVTKDYSAALTWLQRAAGQGDKVAQNNLGDMYYQGAGVAQDYKTAIAWYQKS 179
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLHRGRGVDF 215
A G +++LG+ Y Q + V Y + + +A +Y LA +G+GV
Sbjct: 180 AAQGYAPAEYDLGVMYSQGQGVAQDYATAAIWYQKAADQRLAAAEYNLAYLYEQGQGVTQ 239
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ Q+A WY +AA+ G+ +A N + Y G+G+ +++ A W ++AAD G AQ
Sbjct: 240 DYQKALSWYQKAADRGFAKAQSNLASLYYHGQGVTQNYKTALSWYQKAADQGDAVAQFVL 299
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 331
G LG + + A ++ LA + G A++ V+ + L+ + A + W A
Sbjct: 300 GKIYHLGQSVQKSDVMAYMWFNLAAQRGLKNAENNCLVLSKILTPAQLNDAKKLTQDWMA 359
Query: 332 MPS 334
S
Sbjct: 360 KHS 362
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV +N A + K A +G A + G MY AA++ ++A
Sbjct: 84 GSLYEQGKGVSQNYKTAFSWYQKAADQGFVKAENNVGSMYQYGQGVTKDYSAALTWLQRA 143
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A GD Q NLG Y Q V Y+ +IA G+ A+Y L + +G+GV
Sbjct: 144 AGQGDKVAQNNLGDMYYQGAGVAQDYKTAIAWYQKSAAQGYAPAEYDLGVMYSQGQGVAQ 203
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 272
+ AA WY +AA+ A YN + Y G+G+ +++A W ++AAD G KAQ
Sbjct: 204 DYATAAIWYQKAADQRLAAAEYNLAYLYEQGQGVTQDYQKALSWYQKAADRGFAKAQSNL 263
Query: 273 ---LEHGLGL 279
HG G+
Sbjct: 264 ASLYYHGQGV 273
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
GH AQ+ L +G+GV N + A WY +AA+ G+V+A N Y +G+G+ +
Sbjct: 75 GHAEAQFYLGSLYEQGKGVSQNYKTAFSWYQKAADQGFVKAENNVGSMYQYGQGVTKDYS 134
Query: 255 QARKWMKRAADCGHGKAQLEHGLG-LFTEG-----EMMKAVVYLELATRAGETAADHVKN 308
A W++RAA G G ++ LG ++ +G + A+ + + + G A++
Sbjct: 135 AALTWLQRAA--GQGDKVAQNNLGDMYYQGAGVAQDYKTAIAWYQKSAAQGYAPAEYDLG 192
Query: 309 VILQQLSATSRDRAMLVV 326
V+ Q ++D A +
Sbjct: 193 VMYSQGQGVAQDYATAAI 210
>gi|384490648|gb|EIE81870.1| hypothetical protein RO3G_06575 [Rhizopus delemar RA 99-880]
Length = 484
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 112/237 (47%), Gaps = 16/237 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
E++ + G ++ G G+ KN+ +A+ + A +G+ L G Y + E
Sbjct: 120 ESVAMYNLGYCYEEGFGLEKNMGEAIRWYRLSAEQGNALGQNSLGYCYEDGIGVAANFEE 179
Query: 156 AISLYRQAAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCL 207
A+ Y+ +A G P + NLG Y +++E + +A++ GH RAQ+ L CL
Sbjct: 180 AVKWYKLSAEQGYPWAECNLGYCYQNGIGLIKDETQGAYWYKKAALQGHARAQHNLGFCL 239
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G + + +EA +WY RAA+ G + A ++ CY G G+ ++ +++ W +A+
Sbjct: 240 QNGIGTERDEKEAVKWYRRAADRGNIFAYHSLGYCYQNGVGVEVNKQESFFWYYLSAEEN 299
Query: 268 HGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
H AQL G G+ E +A+++ + G A + ++ T +D
Sbjct: 300 HPPAQLSLGYCYRNGIGVEKNEARAIIWFRKSAELGNALAQNSLGFCFEEGIGTEKD 356
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 78/171 (45%), Gaps = 9/171 (5%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
R ++LG GQ LG+ Q EA+K ++ G A Y L C G G++ N+ EA
Sbjct: 86 RGQSILGYCYGQ-GLGVERDQVEAIKWYRLSADQGESVAMYNLGYCYEEGFGLEKNMGEA 144
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------E 274
RWY +AE G + CY G G+ + +A KW K +A+ G+ A+ +
Sbjct: 145 IRWYRLSAEQGNALGQNSLGYCYEDGIGVAANFEEAVKWYKLSAEQGYPWAECNLGYCYQ 204
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+G+GL + E A Y + A + G A H LQ T RD V
Sbjct: 205 NGIGLIKD-ETQGAYWYKKAALQ-GHARAQHNLGFCLQNGIGTERDEKEAV 253
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G +++G GV KN +A+ F K A G+ LA G + E D K AA Y +
Sbjct: 308 GYCYRNGIGVEKNEARAIIWFRKSAELGNALAQNSLGFCFEEGIGTEKDPKSAAY-WYHK 366
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A +P Q NLG Y +++V +A+ H RA +L L L G GV+
Sbjct: 367 SAQQNNPWAQCNLGFCYANGFGVEKDNKKSVAWYRKAAAQNHGRALDKLGLHLLNGLGVE 426
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
NL+EA + + +AAE Y A+Y+ CY G G + +A W +RA+
Sbjct: 427 RNLEEAFKMFTKAAEQKYTPALYHLGNCYEKGLGCNIDLAKAMSWFERAS 476
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++G G ++ +A+ + + A RG+ A G Y E++K+E+ Y +A
Sbjct: 239 LQNGIGTERDEKEAVKWYRRAADRGNIFAYHSLGYCYQNGVGVEVNKQES-FFWYYLSAE 297
Query: 166 LGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNL 217
P Q +LG Y + EA +++ +++ G+ AQ L C G G + +
Sbjct: 298 ENHPPAQLSLGYCYRNGIGVEKNEARAIIWFRKSAELGNALAQNSLGFCFEEGIGTEKDP 357
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+ AA WY ++A+ A N CY+ G G+ ++++ W ++AA HG+A
Sbjct: 358 KSAAYWYHKSAQQNNPWAQCNLGFCYANGFGVEKDNKKSVAWYRKAAAQNHGRA 411
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
++ A+I H AQY L +C H G + + + A +WY +AE G+ R CY G
Sbjct: 39 IMEAATIYRHPAAQYVLGICYHDGIALQKDAEVAFQWYKLSAEQGHARGQSILGYCYGQG 98
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAG 299
G+ +A KW + +AD G A E G GL E M +A+ + L+ G
Sbjct: 99 LGVERDQVEAIKWYRLSADQGESVAMYNLGYCYEEGFGL--EKNMGEAIRWYRLSAEQG 155
>gi|384411624|ref|YP_005620989.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931998|gb|AEH62538.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 274
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 15/166 (9%)
Query: 135 GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-------- 181
G+ A D G Y+ D K+A IS Y++AA G P Q+ LG + LQ
Sbjct: 45 GNPKAQTDLGTAYYNGQGMAQDYKQA-ISWYQKAANQGYPLAQYYLGNACLQGIGLTQSD 103
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E+AV +A+ G AQY LA+ + GRGV N +A+ W+ R+A G+V A + +
Sbjct: 104 EQAVSWYQKAANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGV 163
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
Y G G+P H +A W +AAD G+ AQ GL ++ EG+++K
Sbjct: 164 MYRNGAGIPEDHDRALFWFHKAADKGYADAQYNLGL-IYHEGKVVK 208
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+G+ ++ +A+ + K A +G LA G + E A+S Y++A
Sbjct: 54 GTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGIGLTQSDEQAVSWYQKA 113
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY-QASI-------AGHVRAQYQLALCLHRGRGVDF 215
A G Q++L I+Y V Y QAS G V AQ+ L + G G+
Sbjct: 114 ANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPE 173
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ A W+ +AA+ GY A YN L Y G+ + +QA W ++AA+ G +A+
Sbjct: 174 DHDRALFWFHKAADKGYADAQYNLGLIYHEGKVVKKDEKQATFWYQQAANQGLVEAEFNL 233
Query: 276 GL----GLFTEGEMMKAVVYLELATRAGETAADHV 306
G+ G + + KA +LE A G++ A V
Sbjct: 234 GIAYLKGQGVQKDKDKATFWLEKAADKGDSHAQDV 268
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L Q + AG+ +AQ L + G+G+ + ++A WY +AA GY A Y G
Sbjct: 38 LEQKARAGNPKAQTDLGTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGI 97
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
GL S QA W ++AA+ G +AQ + +T
Sbjct: 98 GLTQSDEQAVSWYQKAANQGLAEAQYSLAIAYYT 131
>gi|405952396|gb|EKC20213.1| sel-1-like protein 1 [Crassostrea gigas]
Length = 1087
Score = 88.6 bits (218), Expect = 4e-15, Method: Composition-based stats.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 14/216 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
F+ GRGV N ++AL FL A G+ A G MY E E A S +++AA
Sbjct: 704 FQGGRGVGINHERALHYFLMAAESGNANAFAFLGKMYSEGSPAVKQSNETAFSYFKKAAD 763
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G+P GQ LG+ Y+ +A+K A+ G V Q QLAL + GRG +
Sbjct: 764 KGNPVGQTGLGMLYMYGKGVDKDYTKAIKYFSLAADQGWVDGQLQLALMYYGGRGTRRDY 823
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A +++ A++GG+V A YN + ++ G G+ + A + K A+ G +
Sbjct: 824 KLAVKYFNLASQGGHVLAFYNLAQMHATGTGVLRNCHTAVELFKNVAERGRWAEMMPEAY 883
Query: 278 GLFTEGEMMKAVV-YLELATRAGETAADHVKNVILQ 312
++ EG + +A++ Y+ LA E A +V ++ Q
Sbjct: 884 NMYKEGHLDQALMKYVFLAELGYEVAQSNVAYMLDQ 919
>gi|222054048|ref|YP_002536410.1| Sel1 domain-containing protein repeat-containing protein [Geobacter
daltonii FRC-32]
gi|221563337|gb|ACM19309.1| Sel1 domain protein repeat-containing protein [Geobacter daltonii
FRC-32]
Length = 394
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 103/210 (49%), Gaps = 21/210 (10%)
Query: 89 KSWND-----ALRPLR---EAMVLLRWGKRFKHGRGVRK-NLDKALDSFLKGAARGSTLA 139
+++ND A+R R L + G + G+GVRK N + + + K A +G A
Sbjct: 31 RAYNDGDFATAMREFRTDGSPKALYQIGLMYAEGKGVRKPNPTEGMKWYRKAADQGFVKA 90
Query: 140 MVDAGLMY----WEMDKKEAAISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKL 187
GL+Y + ++ A YR+AA G Q+NL G+ + EA K
Sbjct: 91 QYALGLLYALGEGTLTNRKEAARWYRKAADQGHVTAQYNLAQMYSRGDGVKQDEAEAFKW 150
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+A+ GH AQ +A +G GV + +EAARWYL+AAE G A + + Y GE
Sbjct: 151 YRKAAEQGHGTAQLTIAQLYDKGLGVAPDKKEAARWYLKAAEQGKPAAQFAVATMYEKGE 210
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
G+ ++A KW +RAA+ H KAQ + G
Sbjct: 211 GVEADKKEALKWFRRAAEQKHAKAQFKVGF 240
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+ G GV + +A +LK A +G A MY E DKKEA + +R+AA
Sbjct: 170 YDKGLGVAPDKKEAARWYLKAAEQGKPAAQFAVATMYEKGEGVEADKKEA-LKWFRRAAE 228
Query: 166 LGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
QF +G Y ++ EAVK +A+ +G AQ+ L + + GRG++ N
Sbjct: 229 QKHAKAQFKVGFYYDRDDSGAEGKKEAVKWYRRAAESGVSEAQFNLGILYYYGRGIERNK 288
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+EA +W+ +AA G A +N Y G+G+ ++A KW +++AD G +AQ GL
Sbjct: 289 KEAVKWFRKAAGQGDSDAQFNLGHMYDQGDGIKQDWKEAVKWYRKSADQGFDQAQFSLGL 348
Query: 278 GLF 280
F
Sbjct: 349 MYF 351
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVL 166
++ G GV + +AL F + A + A G Y D K+ A+ YR+AA
Sbjct: 206 YEKGEGVEADKKEALKWFRRAAEQKHAKAQFKVGFYYDRDDSGAEGKKEAVKWYRRAAES 265
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G QFNLGI Y ++EAVK +A+ G AQ+ L +G G+ + +
Sbjct: 266 GVSEAQFNLGILYYYGRGIERNKKEAVKWFRKAAGQGDSDAQFNLGHMYDQGDGIKQDWK 325
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
EA +WY ++A+ G+ +A ++ L Y G G+ + R+A KW +AA+ G
Sbjct: 326 EAVKWYRKSADQGFDQAQFSLGLMYFHGHGVKQNRREAIKWFVKAAEQG 374
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 15/128 (11%)
Query: 167 GDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G P + +G+ Y + E +K +A+ G V+AQY L L G G N
Sbjct: 49 GSPKALYQIGLMYAEGKGVRKPNPTEGMKWYRKAADQGFVKAQYALGLLYALGEGTLTNR 108
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL---- 273
+EAARWY +AA+ G+V A YN + YS G+G+ +A KW ++AA+ GHG AQL
Sbjct: 109 KEAARWYRKAADQGHVTAQYNLAQMYSRGDGVKQDEAEAFKWYRKAAEQGHGTAQLTIAQ 168
Query: 274 --EHGLGL 279
+ GLG+
Sbjct: 169 LYDKGLGV 176
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 14/127 (11%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
+A+ + + A G + A + G++Y+ E +KKEA + +R+AA GD QFNLG
Sbjct: 254 EAVKWYRRAAESGVSEAQFNLGILYYYGRGIERNKKEA-VKWFRKAAGQGDSDAQFNLGH 312
Query: 178 SYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y Q +EAVK +++ G +AQ+ L L G GV N +EA +W+++AAE
Sbjct: 313 MYDQGDGIKQDWKEAVKWYRKSADQGFDQAQFSLGLMYFHGHGVKQNRREAIKWFVKAAE 372
Query: 230 GGYVRAM 236
G A+
Sbjct: 373 QGSEEAI 379
>gi|432903884|ref|ZP_20113155.1| hypothetical protein A13Y_01518 [Escherichia coli KTE194]
gi|433038951|ref|ZP_20226554.1| hypothetical protein WIE_02303 [Escherichia coli KTE113]
gi|431434318|gb|ELH15968.1| hypothetical protein A13Y_01518 [Escherichia coli KTE194]
gi|431551858|gb|ELI25824.1| hypothetical protein WIE_02303 [Escherichia coli KTE113]
Length = 378
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G+ + G GV ++ A + K AA+ A V+ ++Y E D ++A S Y +
Sbjct: 121 GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQAK-SWYEK 179
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA P QF LGI Y V+ YQ A+ AQ+ L + ++G GV
Sbjct: 180 AAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLYYKGEGVK 239
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N ++A W+ +AA A YN Y +G+G+ S+RQA+ W ++AA+ GH AQ
Sbjct: 240 QNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEKGHVDAQYN 299
Query: 275 HGLGLFTEGE 284
G+ ++ GE
Sbjct: 300 LGV-IYENGE 308
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G GV ++ +A + K AA+ S A G++Y E D ++A Y +AA
Sbjct: 160 YAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAK-DWYEKAAE 218
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
QFNLG+ Y + E VK + +A+ AQY L + G+GV +
Sbjct: 219 QNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSY 278
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA +AQ E L
Sbjct: 279 RQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE--L 336
Query: 278 GLFTE 282
G+ E
Sbjct: 337 GVMNE 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 18/195 (9%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 173 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 232
Query: 148 WEMDKKEAAISLYRQA-------AVLGDPAGQFNLGISYLQEEAVKLLY--------QAS 192
+ K E +RQA A P Q+NLG Y + V Y +A+
Sbjct: 233 Y---KGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAA 289
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
GHV AQY L + G GV N Q+A WY +AA +A + + G+G +
Sbjct: 290 EKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESID 349
Query: 253 HRQARKWMKRAADCG 267
+QAR + +R+ + G
Sbjct: 350 LKQARHYYERSCNNG 364
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 70/169 (41%), Gaps = 14/169 (8%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLG 176
D L G A GLMY ++D ++A I Y +AA DP Q LG
Sbjct: 27 DSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAADQNDPRAQAKLG 85
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQ--------YQLALCLHRGRGVDFNLQEAARWYLRAA 228
+ Y V YQ S + +A + L G GV + Q A WY +AA
Sbjct: 86 VMYANGLGVNQDYQQSKLWYEKAAAQNDADAQFLLGEMYDDGLGVSQDYQHAKMWYEKAA 145
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
RA N ++ Y+ G G+ +RQA+ W ++AA AQ G+
Sbjct: 146 AQNDERAQVNLAVLYAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGI 194
>gi|237746260|ref|ZP_04576740.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377611|gb|EEO27702.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 376
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
GK ++ G GV+++ +A+ + K +G+ A + +MY E D K+A LY Q
Sbjct: 63 GKMYRKGEGVQQDNRQAVYWYTKSVEQGNRKAQNNLAVMYDNGFGVEKDLKKA-FELYSQ 121
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G A QFNLG+ Y + VK L A+ G++RAQ LA+ +G+G+
Sbjct: 122 SAAQGTTAAQFNLGMMYRDGQGVKKDYVKAFELFSLAADRGNIRAQNALAVLYTQGKGIQ 181
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY ++AE GY A + + Y GEG+P + +A KW K+AA G+ ++
Sbjct: 182 RDYAKALYWYRKSAEKGYDEAQHAMGVVYQKGEGVPANRDEAIKWYKKAAAQGYARSMAN 241
Query: 275 HGLGLFTE 282
G + E
Sbjct: 242 LGSLYYPE 249
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKE--AAISLYRQAAVL 166
+ +G GV K+L KA + + + AA+G+T A + G+MY + KK+ A L+ AA
Sbjct: 102 YDNGFGVEKDLKKAFELYSQSAAQGTTAAQFNLGMMYRDGQGVKKDYVKAFELFSLAADR 161
Query: 167 GDPAGQFNLGISY-----LQEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q L + Y +Q + K LY +++ G+ AQ+ + + +G GV N
Sbjct: 162 GNIRAQNALAVLYTQGKGIQRDYAKALYWYRKSAEKGYDEAQHAMGVVYQKGEGVPANRD 221
Query: 219 EAARWYLRAAEGGYVRAMYN-TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
EA +WY +AA GY R+M N SL Y G S +A KW A D G K GL
Sbjct: 222 EAIKWYKKAAAQGYARSMANLGSLYYPEDAGDLESWDEAYKWYSMAIDHGDRK-NAPLGL 280
Query: 278 GLF 280
GL
Sbjct: 281 GLI 283
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G+G++++ KAL + K A +G A G++Y + + ++ AI Y++AA
Sbjct: 174 YTQGKGIQRDYAKALYWYRKSAEKGYDEAQHAMGVVYQKGEGVPANRDEAIKWYKKAAAQ 233
Query: 167 GDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHR--GRG-VDF 215
G NLG Y E+A L Y +I R L L L G G
Sbjct: 234 GYARSMANLGSLYYPEDAGDLESWDEAYKWYSMAIDHGDRKNAPLGLGLIHLFGSGRYPV 293
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--L 273
+ +A + AAE G Y + +G G P + +A + KRAA+ G A L
Sbjct: 294 DNAKAYSLFTLAAENGRADGWYWLGVMEEYGFGRPQNEERAMELYKRAANAGVEPAINCL 353
Query: 274 EHG 276
EHG
Sbjct: 354 EHG 356
>gi|189502324|ref|YP_001958041.1| hypothetical protein Aasi_0954 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497765|gb|ACE06312.1| hypothetical protein Aasi_0954 [Candidatus Amoebophilus asiaticus
5a2]
Length = 838
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 13/189 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G +K G GV+++ KA++ + K A +G+ A G +Y E +D E AI Y +A
Sbjct: 359 GLMYKKGLGVKRDYKKAIEWYTKAANQGNIAAQNSLGYIYKEGKGVDPNYEKAIEWYTKA 418
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G+ Q+NLGI Y QEE YQ SI + AQ L + G+GV
Sbjct: 419 ADQGNTVAQYNLGIIYKQEEGTVCDYQESIKWLTKAANQKNSYAQTSLGHMYYHGKGVRQ 478
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ Q+A WY++AA G A + Y +G+ + +ARKW ++AA G +Q
Sbjct: 479 DYQKAIEWYIKAANQGNRDAQDSLGYIYYNAKGVERDYEKARKWYEKAAKQGDRNSQTYL 538
Query: 276 GLGLFTEGE 284
G+ ++ +G+
Sbjct: 539 GI-MYKKGQ 546
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 74 ASFTLPQLRAASLVCKSWNDALRPLRE----AMVLLRWGKRFKHGRGVRKNLDKALDSFL 129
+ +P L + + SW L+E LL + K+ K R+ + S +
Sbjct: 289 SKIKIPPLMQSLVDPFSWQGIQAKLQEDERYVYFLLHFSKQAKDHTIYRE-----IVSSV 343
Query: 130 KGAAR-GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLL 188
K AR G+TLA + GLMY KK LG+ ++A++
Sbjct: 344 KAYARAGNTLAQTNLGLMY----KK--------------------GLGVKRDYKKAIEWY 379
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
+A+ G++ AQ L G+GVD N ++A WY +AA+ G A YN + Y EG
Sbjct: 380 TKAANQGNIAAQNSLGYIYKEGKGVDPNYEKAIEWYTKAADQGNTVAQYNLGIIYKQEEG 439
Query: 249 LPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVV-YLELATRAGET 301
++++ KW+ +AA+ + AQ HG G+ + KA+ Y++ A +
Sbjct: 440 TVCDYQESIKWLTKAANQKNSYAQTSLGHMYYHGKGV--RQDYQKAIEWYIKAANQGNRD 497
Query: 302 AAD 304
A D
Sbjct: 498 AQD 500
>gi|386815241|ref|ZP_10102459.1| Sel1 domain protein repeat-containing protein [Thiothrix nivea DSM
5205]
gi|386419817|gb|EIJ33652.1| Sel1 domain protein repeat-containing protein [Thiothrix nivea DSM
5205]
Length = 464
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 113/234 (48%), Gaps = 26/234 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G R+ G+ KNL +A F K A +G A + LMY D E AI Y
Sbjct: 213 GVRYLQGKAQNKNLTQAAYWFRKAAQQGDPAAAFNLALMY---DNGEGVGKNLPEAIRWY 269
Query: 161 RQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
RQAA G+ Q+NLG+ YL E+ + + +A+ G+ AQY LA L +G+
Sbjct: 270 RQAAQQGENGAQYNLGVKYLLGESLPQDHEKGINWIRKAAEGGNPAAQYTLAYMLDQGKD 329
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ + +A WY ++A GY A ++ ++ G+G+ +A +W ++AAD G+ AQ
Sbjct: 330 LPKDDTQALYWYRQSAAQGYTNAQTGLAIMFANGQGVQADPEEAIRWFQKAADAGNAAAQ 389
Query: 273 LE------HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
HG+G T ++ A +L A G A ++ +L+QLS + D
Sbjct: 390 FNLGTCMAHGVG--TAKDLPSAAYWLSRAAAQGHEHAADNRDYVLKQLSDSEHD 441
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-KLLYQASI-------AGHVRAQ 200
+ D +EAA Y +AA G QF+LG+ YLQ +A K L QA+ G A
Sbjct: 187 QADSEEAAY-WYTRAAQNGHSDAQFDLGVRYLQGKAQNKNLTQAAYWFRKAAQQGDPAAA 245
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ LAL G GV NL EA RWY +AA+ G A YN + Y GE LP H + W+
Sbjct: 246 FNLALMYDNGEGVGKNLPEAIRWYRQAAQQGENGAQYNLGVKYLLGESLPQDHEKGINWI 305
Query: 261 KRAADCGHGKAQ 272
++AA+ G+ AQ
Sbjct: 306 RKAAEGGNPAAQ 317
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 13/223 (5%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-MDKKEAAISLYRQAAVLGDP 169
++ G V+++ KA + + A +G + + G++ + E A QAA D
Sbjct: 111 YETGSYVKQDNTKAASLYERAAKQGHVDSQYNLGVLSLQAFHDVEKARYWLEQAAQQQDV 170
Query: 170 AGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NL + Y EEA +A+ GH AQ+ L + +G+ + NL +AA
Sbjct: 171 EAQYNLALLYDFSIDPQADSEEAAYWYTRAAQNGHSDAQFDLGVRYLQGKAQNKNLTQAA 230
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----L 277
W+ +AA+ G A +N +L Y GEG+ + +A +W ++AA G AQ G L
Sbjct: 231 YWFRKAAQQGDPAAAFNLALMYDNGEGVGKNLPEAIRWYRQAAQQGENGAQYNLGVKYLL 290
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G + K + ++ A G AA + +L Q +D
Sbjct: 291 GESLPQDHEKGINWIRKAAEGGNPAAQYTLAYMLDQGKDLPKD 333
>gi|258545692|ref|ZP_05705926.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258519062|gb|EEV87921.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 499
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKE 154
+A R G +GRG +N +A++ + K A +G A + G MY E+D ++
Sbjct: 37 DAAAQFRLGWMHANGRGTAQNDRRAVEWYSKAAEQGHAAAQCNLGWMYGQGRGVEIDDEQ 96
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYL------QEE--AVKLLYQASIAGHVRAQYQLALC 206
AA R AA GD QFNLG Y+ Q+E A QA+ G V AQ+ L
Sbjct: 97 AAYWFER-AATQGDKQAQFNLGNLYIAGQGVPQDERRAAFWFVQAAQQGDVEAQFNLGNL 155
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G GV + + A RW+ +AA+ GY +A N ++ Y G G+ QA +W AA+
Sbjct: 156 YFHGNGVTQDDRRAVRWFEKAAQQGYAKAQCNLAMMYERGRGVAQDAEQAAEWYGCAAEQ 215
Query: 267 GHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
G KAQ + G+G+ + M A +L +A G +A
Sbjct: 216 GDSKAQYRLGLLYDKGIGVAQDDNM--ARYWLAVAAEQGNDSA 256
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 16/158 (10%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A +L +Q A GD A QF LG + AV+ +A+ GH AQ L
Sbjct: 25 AYTLAQQEAQQGDAAAQFRLGWMHANGRGTAQNDRRAVEWYSKAAEQGHAAAQCNLGWMY 84
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+GRGV+ + ++AA W+ RAA G +A +N Y G+G+P R+A W +AA G
Sbjct: 85 GQGRGVEIDDEQAAYWFERAATQGDKQAQFNLGNLYIAGQGVPQDERRAAFWFVQAAQQG 144
Query: 268 HGKAQLE------HGLGLFTEGEMMKAVVYLELATRAG 299
+AQ HG G+ + +AV + E A + G
Sbjct: 145 DVEAQFNLGNLYFHGNGVTQDD--RRAVRWFEKAAQQG 180
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
EA L Q + G AQ++L GRG N + A WY +AAE G+ A N
Sbjct: 24 EAYTLAQQEAQQGDAAAQFRLGWMHANGRGTAQNDRRAVEWYSKAAEQGHAAAQCNLGWM 83
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATR 297
Y G G+ + QA W +RAA G +AQ G L+ G+ + +A + A +
Sbjct: 84 YGQGRGVEIDDEQAAYWFERAATQGDKQAQFNLG-NLYIAGQGVPQDERRAAFWFVQAAQ 142
Query: 298 AGETAAD-HVKNVILQQLSATSRDR 321
G+ A ++ N+ T DR
Sbjct: 143 QGDVEAQFNLGNLYFHGNGVTQDDR 167
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+Y ++A QA+ G+ AQYQL G+GV+ + + AA+WY +AA G+ +A
Sbjct: 386 FTYAAQQAAASFEQAAKQGNADAQYQLGFMYETGQGVEQDYRRAAQWYEKAAAQGHAQAQ 445
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA--QLE 274
Y Y G G+ + +A KW +RAA G +A QLE
Sbjct: 446 YQLGSLYREGLGVEENDEEAEKWWQRAAAQGVAQAHRQLE 485
>gi|432947310|ref|XP_004083982.1| PREDICTED: protein sel-1 homolog 1-like [Oryzias latipes]
Length = 796
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F + A G+T AM G MY E E A+ +++A+ LG+
Sbjct: 368 GRGVEQNHQRAFDYFTQAANAGNTHAMAFLGKMYSEGSAFLPQNNETALQYFKKASDLGN 427
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 428 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGTMYYNGIGVKRDYKQA 487
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++ G++ A YN + ++ G G+ S A + K + G +L F
Sbjct: 488 LKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYSSF 547
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 313
EG+ A+V YL LA + E A +V ++ Q+
Sbjct: 548 KEGDAESALVQYLLLAEQGYEVAQSNVAFLLEQK 581
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ LA + G YW E+A++ YR
Sbjct: 243 GFLYAAGLGVNSSQAKALVYYTFGALGGNLLAHMILGYRYWAGVGVPQSCESALTHYRLV 302
Query: 164 A--------VLGDPAGQ--------FNLGIS--YLQEEAVKLLYQASIAGHVRAQYQLA- 204
A + G A Q N G + L+E+ ++ + G V+AQ L
Sbjct: 303 ANQVANDVSLTGGSAVQRIRLLDEVENPGSTSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 362
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G LP ++ A ++ K+A
Sbjct: 363 LHLHGGRGVEQNHQRAFDYFTQAANAGNTHAMAFLGKMYSEGSAFLPQNNETALQYFKKA 422
Query: 264 ADCGHGKAQLEHGLGL 279
+D G+ Q GLG+
Sbjct: 423 SDLGNPVGQ--SGLGM 436
>gi|340363635|ref|ZP_08685958.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|339885314|gb|EGQ75043.1| TPR repeat protein [Neisseria macacae ATCC 33926]
Length = 348
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 18/238 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A + L G ++ G+GVR++ +A F K A G A + +MY E E
Sbjct: 45 DAELQLALGVMYEQGKGVRQDYAEAAGWFRKAAELGLAAAQYNLAVMYTEGRGVRQDYEE 104
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ YR+AA G Q NLG Y +AV+ +A G AQY L L
Sbjct: 105 AVRWYRKAADQGFAEAQNNLGAMYKDGKGIRQDDNQAVQWYRKAVEQGVAAAQYNLGLMY 164
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ GRGV + ++A +WY +AA GY A N + Y G+G+ + QA KW ++AA+ G
Sbjct: 165 YEGRGVRQDYKQALQWYRKAAGQGYKDAQNNLGVMYKDGKGVRKDYVQAVKWYRKAAEQG 224
Query: 268 HGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ +AQ G+ ++TEG+ ++ AV + A G+ A + V+ + +D
Sbjct: 225 NAEAQYNLGV-MYTEGQGVRQDDAQAVQWFRRAVEQGDANAQYNLGVMYAKGRGVRQD 281
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +K G+G+R++ ++A+ + K +G A + GLMY+E D K+A + YR+
Sbjct: 125 GAMYKDGKGIRQDDNQAVQWYRKAVEQGVAAAQYNLGLMYYEGRGVRQDYKQA-LQWYRK 183
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG+ Y +AVK +A+ G+ AQY L + G+GV
Sbjct: 184 AAGQGYKDAQNNLGVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYNLGVMYTEGQGVR 243
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A +W+ RA E G A YN + Y+ G G+ + Q + +AA HG A+ +
Sbjct: 244 QDDAQAVQWFRRAVEQGDANAQYNLGVMYAKGRGVRQDYVQTLQLWHKAAR--HGVAEAQ 301
Query: 275 HGLG 278
GLG
Sbjct: 302 SGLG 305
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVR---------AQYQLALCLHRGRG 212
Q A GD Q LG+ Y Q + V+ Y A AG R AQY LA+ GRG
Sbjct: 39 QLAEAGDAELQLALGVMYEQGKGVRQDY-AEAAGWFRKAAELGLAAAQYNLAVMYTEGRG 97
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +EA RWY +AA+ G+ A N Y G+G+ QA +W ++A + G AQ
Sbjct: 98 VRQDYEEAVRWYRKAADQGFAEAQNNLGAMYKDGKGIRQDDNQAVQWYRKAVEQGVAAAQ 157
Query: 273 LEHGLGLFTEG 283
GL ++ EG
Sbjct: 158 YNLGL-MYYEG 167
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G +K G+GVRK+ +A+ + K A +G+ A + G+MY E + + +A A+ +R+A
Sbjct: 197 GVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYNLGVMYTEGQGVRQDDAQAVQWFRRA 256
Query: 164 AVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDF 215
GD Q+NLG+ Y + V+ L ++A+ G AQ L + GRGV
Sbjct: 257 VEQGDANAQYNLGVMYAKGRGVRQDYVQTLQLWHKAARHGVAEAQSGLGWMYYTGRGVRQ 316
Query: 216 NLQEAARWYLRAAEGGY 232
N A WY +A + G+
Sbjct: 317 NSVIAKEWYKKACDNGF 333
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A K + Q + AG Q L + +G+GV + EAA W+ +AAE G A YN ++ Y
Sbjct: 33 AQKEMLQLAEAGDAELQLALGVMYEQGKGVRQDYAEAAGWFRKAAELGLAAAQYNLAVMY 92
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRA 298
+ G G+ + +A +W ++AAD G +AQ G ++ +G+ ++ AV + A
Sbjct: 93 TEGRGVRQDYEEAVRWYRKAADQGFAEAQNNLG-AMYKDGKGIRQDDNQAVQWYRKAVEQ 151
Query: 299 GETAADH 305
G AA +
Sbjct: 152 GVAAAQY 158
>gi|255068262|ref|ZP_05320117.1| TPR repeat protein [Neisseria sicca ATCC 29256]
gi|255047454|gb|EET42918.1| TPR repeat protein [Neisseria sicca ATCC 29256]
Length = 384
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +GRGVR+N ++A + K A +G A + G +Y E D EA + YR+
Sbjct: 197 GVMYANGRGVRQNYEEAAQWYRKAAEQGDVDAQNNLGALYDEGQGVRQDSAEA-VRWYRK 255
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG++Y + + V+ Y +A+ G AQ+ L + G+GV
Sbjct: 256 AAERGYVVAQNNLGVAYSEGQGVRQDYPEALRWYRKAAEQGFAAAQHNLGEMYYEGKGVH 315
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N EA +WYL+AAE G+ A Y G+G+P + + A++W K+A D G
Sbjct: 316 QNYTEALQWYLKAAEQGFSPAQNRLGEMYEEGQGVPKNRKVAKEWHKKACDNG 368
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 14/205 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQF 173
G+GV ++ +KA++ A +G A + G+MY + A ++AA G Q
Sbjct: 99 GQGVNQDHEKAMEWCRSAADKGYLPAQNNLGMMYGVLKNYVEATKWLQKAAEQGSVNAQK 158
Query: 174 NLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
NLG+ Y Q EEA + +A++ G AQY L + GRGV N +EAA+WY
Sbjct: 159 NLGLMYEQGQGVRQNYEEAARWYSKAAVQGDANAQYHLGVMYANGRGVRQNYEEAAQWYR 218
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 285
+AAE G V A N Y G+G+ +A +W ++AA+ G+ AQ G+ ++EG+
Sbjct: 219 KAAEQGDVDAQNNLGALYDEGQGVRQDSAEAVRWYRKAAERGYVVAQNNLGVA-YSEGQG 277
Query: 286 MK-----AVVYLELATRAGETAADH 305
++ A+ + A G AA H
Sbjct: 278 VRQDYPEALRWYRKAAEQGFAAAQH 302
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 13/189 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GVR+N ++A + K A +G A G+MY E A YR+A
Sbjct: 161 GLMYEQGQGVRQNYEEAARWYSKAAVQGDANAQYHLGVMYANGRGVRQNYEEAAQWYRKA 220
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD Q NLG Y + EAV+ +A+ G+V AQ L + G+GV
Sbjct: 221 AEQGDVDAQNNLGALYDEGQGVRQDSAEAVRWYRKAAERGYVVAQNNLGVAYSEGQGVRQ 280
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA RWY +AAE G+ A +N Y G+G+ ++ +A +W +AA+ G AQ
Sbjct: 281 DYPEALRWYRKAAEQGFAAAQHNLGEMYYEGKGVHQNYTEALQWYLKAAEQGFSPAQNRL 340
Query: 276 GLGLFTEGE 284
G ++ EG+
Sbjct: 341 GE-MYEEGQ 348
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEA 155
EA V + G + G GVR++ +A+ + K A +G A + +MY+ E
Sbjct: 49 EADVQVVLGSMYLRGIGVRQSDQEAVRWYRKAAEQGRAEAQYNLCMMYYVGQGVNQDHEK 108
Query: 156 AISLYRQAAVLGDPAGQFNLGISY--LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGR 211
A+ R AA G Q NLG+ Y L+ EA K L +A+ G V AQ L L +G+
Sbjct: 109 AMEWCRSAADKGYLPAQNNLGMMYGVLKNYVEATKWLQKAAEQGSVNAQKNLGLMYEQGQ 168
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV N +EAARWY +AA G A Y+ + Y+ G G+ ++ +A +W ++AA+ G A
Sbjct: 169 GVRQNYEEAARWYSKAAVQGDANAQYHLGVMYANGRGVRQNYEEAAQWYRKAAEQGDVDA 228
Query: 272 QLEHGLGLFTEGEMMK 287
Q G L+ EG+ ++
Sbjct: 229 QNNLG-ALYDEGQGVR 243
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+K + Q + AG Q L RG GV + QEA RWY +AAE G A YN + Y
Sbjct: 38 LKKIVQRAEAGEADVQVVLGSMYLRGIGVRQSDQEAVRWYRKAAEQGRAEAQYNLCMMYY 97
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 304
G+G+ H +A +W + AAD G+ AQ G+ ++A +L+ A G A
Sbjct: 98 VGQGVNQDHEKAMEWCRSAADKGYLPAQNNLGMMYGVLKNYVEATKWLQKAAEQGSVNAQ 157
Query: 305 HVKNVILQQ 313
++ +Q
Sbjct: 158 KNLGLMYEQ 166
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GVR++ +A+ + K A RG +A + G+ Y E D EA + YR+
Sbjct: 233 GALYDEGQGVRQDSAEAVRWYRKAAERGYVVAQNNLGVAYSEGQGVRQDYPEA-LRWYRK 291
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G A Q NLG Y + EA++ +A+ G AQ +L G+GV
Sbjct: 292 AAEQGFAAAQHNLGEMYYEGKGVHQNYTEALQWYLKAAEQGFSPAQNRLGEMYEEGQGVP 351
Query: 215 FNLQEAARWYLRAAEGGY 232
N + A W+ +A + G+
Sbjct: 352 KNRKVAKEWHKKACDNGF 369
>gi|327259288|ref|XP_003214470.1| PREDICTED: protein sel-1 homolog 1-like [Anolis carolinensis]
Length = 860
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +++AA +G+
Sbjct: 455 GRGVEQNHQRAFEYFSQAAGAGNSHAMAFLGKMYSEGSDIVPQNNETALQYFKKAADMGN 514
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 515 PVGQSGLGMAYLYGKGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 574
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L + +
Sbjct: 575 YKYFNMASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMNAYNSY 634
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 313
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 635 KDGDTNSAVVQYLLLAEQGYEVAQSNAAFILDQK 668
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 330 GFLYASGLGVDSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 389
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 390 ANHVASDISLTGGTVVQRIRLPDEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 449
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G + P ++ A ++ K+A
Sbjct: 450 LHLHGGRGVEQNHQRAFEYFSQAAGAGNSHAMAFLGKMYSEGSDIVPQNNETALQYFKKA 509
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 510 ADMGNPVGQ--SGLGM 523
>gi|168335202|ref|ZP_02693307.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 376
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV+ +L+++ + K A +GS A G+ Y+ + E AI + +A
Sbjct: 195 GYLYATGMGVKLDLEESAKWYTKAAEKGSPRAQNSIGICYFYGRGVVKNLEKAIEWFAKA 254
Query: 164 AVLGDPAGQFNLGISYLQEE-------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
A Q NLGI Y E AVK +A+ ++ AQ+ L +C G G + +
Sbjct: 255 AEKEYVPAQNNLGICYGTESECRDLSAAVKWYTKAAEKDYMEAQFSLGMCYKYGEGTEVD 314
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
L EA +W +AA+ G+ A +N CY FGEG+ + +A W +AA+ GH +AQ+
Sbjct: 315 LLEAFKWLKKAADKGHGDAQFNLGWCYEFGEGVTKNIAEAANWYAKAAEQGHERAQINLN 374
Query: 277 L 277
L
Sbjct: 375 L 375
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 18/205 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLYRQA 163
++ G GV ++ +KA + K A +G LA + + Y +MD+ AI L +A
Sbjct: 90 YEQGVGVERSPEKAFQLYNKAAEQGYLLAQNNLAMCYERGTGIIADMDQ---AIKLLTEA 146
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ Q NLG+ Y + + AVK A+ G V AQ L G GV
Sbjct: 147 AEKGNSTAQSNLGLHYEKGKGVRQDCDIAVKWYKLAAEQGDVFAQTNLGYLYATGMGVKL 206
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+L+E+A+WY +AAE G RA + +CY +G G+ + +A +W +AA+ + AQ
Sbjct: 207 DLEESAKWYTKAAEKGSPRAQNSIGICYFYGRGVVKNLEKAIEWFAKAAEKEYVPAQNNL 266
Query: 276 GLGLFTEGEMMKAVVYLELATRAGE 300
G+ TE E ++ T+A E
Sbjct: 267 GICYGTESECRDLSAAVKWYTKAAE 291
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A R G +K G+GV KN+ +A+ + A + +A Y + E
Sbjct: 43 DAEAQYRIGVCYKLGKGVEKNIKEAVKWYTMSANQEHAMAQNSLAACYEQGVGVERSPEK 102
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A LY +AA G Q NL + Y + ++A+KLL +A+ G+ AQ L L
Sbjct: 103 AFQLYNKAAEQGYLLAQNNLAMCYERGTGIIADMDQAIKLLTEAAEKGNSTAQSNLGLHY 162
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G+GV + A +WY AAE G V A N Y+ G G+ L ++ KW +AA+ G
Sbjct: 163 EKGKGVRQDCDIAVKWYKLAAEQGDVFAQTNLGYLYATGMGVKLDLEESAKWYTKAAEKG 222
Query: 268 HGKAQLEHGLGLF 280
+AQ G+ F
Sbjct: 223 SPRAQNSIGICYF 235
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
AV GD Q+ +G+ Y +EAVK ++ H AQ LA C +G GV+
Sbjct: 39 AVEGDAEAQYRIGVCYKLGKGVEKNIKEAVKWYTMSANQEHAMAQNSLAACYEQGVGVER 98
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A + Y +AAE GY+ A N ++CY G G+ QA K + AA+ G+ AQ
Sbjct: 99 SPEKAFQLYNKAAEQGYLLAQNNLAMCYERGTGIIADMDQAIKLLTEAAEKGNSTAQSNL 158
Query: 276 GL 277
GL
Sbjct: 159 GL 160
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
++ ++ G AQY++ +C G+GV+ N++EA +WY +A + A + + CY G G
Sbjct: 36 FELAVEGDAEAQYRIGVCYKLGKGVEKNIKEAVKWYTMSANQEHAMAQNSLAACYEQGVG 95
Query: 249 LPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETA 302
+ S +A + +AA+ G+ AQ E G G+ +M +A+ L A G +
Sbjct: 96 VERSPEKAFQLYNKAAEQGYLLAQNNLAMCYERGTGIIA--DMDQAIKLLTEAAEKGNST 153
Query: 303 A 303
A
Sbjct: 154 A 154
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 272
F +E RW+ A EG A Y +CY G+G+ + ++A KW +A+ H AQ
Sbjct: 27 FMNEEERRWFELAVEGD-AEAQYRIGVCYKLGKGVEKNIKEAVKWYTMSANQEHAMAQNS 85
Query: 273 ----LEHGLGL 279
E G+G+
Sbjct: 86 LAACYEQGVGV 96
>gi|237748063|ref|ZP_04578543.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379425|gb|EEO29516.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 1238
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G+ + G+ VR++L K++ + KGA G T + D M E D+K AA ++Y +
Sbjct: 832 GRIYYDGKIVRQDLKKSVFWYRKGAQSGDTRSQNDLAYMMEYGKGLEKDEK-AACTMYEK 890
Query: 163 AAVLGDPAGQFNLGISYL---------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
A + GQF LG+ YL Q EAV+L A+ AQY L + G+GV
Sbjct: 891 TAGEKNAYGQFRLGLCYLNGKGGKAKDQREAVRLFESAAGQNLASAQYFLGIYHKEGKGV 950
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
N+ EA +WYL AA+ G+V +M+ ++ G G ++A W ++AA+ G A
Sbjct: 951 VKNMNEAFKWYLTAADNGHVSSMFEVGKMFANGRGTERDDKKAFHWFEKAAENGSDSALT 1010
Query: 274 EHGL----GLFTEGEMMKAVVYLELATRAGETAADH 305
+ G+ GL + KA + A + A H
Sbjct: 1011 QLGIMYYKGLGISADKSKAASFFLKAAEKNNSYAQH 1046
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------WEMDKKEAAISLY 160
G + G G +++ KA F K A G T A GL+Y + DK +S+
Sbjct: 35 GAWYAIGAGGKRDWIKARIWFEKAATEGDTRAAYPLGLLYSAGLGTPIDYDKAFYWLSI- 93
Query: 161 RQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
AA P Q+ L G + + E + +A+ GH+ AQ + + LH G G
Sbjct: 94 --AARQNIPDAQYRLAGLYQEGKGTAKSEREFAYWVKKAAGNGHIDAQRAMGMILHYGLG 151
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V NL E+ +W+ +AA G A Y + Y G GL + R+ KW+ RAA H +AQ
Sbjct: 152 VHKNLPESVKWFEKAANAGNATAQYYLGMDYMNGNGLAKNEREGEKWLYRAAMQDHLEAQ 211
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 19/233 (8%)
Query: 62 ASLPFDVLNKIAASFTLPQLRAASLVCKSWND--ALRPLREAMVLLRWGKRFKHGRGVRK 119
AS FD+ + P R ++V W + A + R A L G + +G V
Sbjct: 283 ASAQFDLGRTLFQDKNSPAKRKEAVV---WLEKAAQQDERRAQAFL--GNMYYYGEFVPV 337
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNL 175
+ KAL ++ A +G + A GL Y + + + A S ++A + Q+ L
Sbjct: 338 DYVKALPLLMRAADKGDSFAQYTLGLAYIDGNGIAKDERKAFSWLEKSASQNRASAQYFL 397
Query: 176 GISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ YL +E+ ++LL + + G+V AQY+L H G + +L EA +WY A
Sbjct: 398 GLMYLDGTGTPVNEEKGIRLLKELAKTGYVYAQYKLGTYAHSGLHMAKDLAEARKWYQLA 457
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
A +++A Y + G ++ W AA AQLE G L
Sbjct: 458 ASQDHIKAKYWLGMSLFQGPDSEQDRKKGVYWFTEAAKQDDPDAQLELGKSLL 510
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 13/149 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+ V++++ KAL+ F KG G + G M KE A +Y +
Sbjct: 651 GNIYYDGKIVKQDMAKALNYFQKGTGLGHLPSQNFVGFMIENGSGVKKDKEKACKIYDET 710
Query: 164 AVLGDPAGQFNLGISYL---------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
G G + G+ L Q++A L QA+ AQY LALC G+G
Sbjct: 711 GRRGSAYGLYRYGLCQLSDPDPSPENQKKAFILFEQAARKNLADAQYFLALCYEYGKGTP 770
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
N EA WY RA+E A+Y + Y
Sbjct: 771 KNPGEAIEWYRRASENDKPEALYQLGMLY 799
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 42/214 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G K G+GV KN+++A +L A G +M + G M+ E D K+A + +
Sbjct: 941 GIYHKEGKGVVKNMNEAFKWYLTAADNGHVSSMFEVGKMFANGRGTERDDKKA-FHWFEK 999
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
AA G + LGI Y ++G G+ + +AA
Sbjct: 1000 AAENGSDSALTQLGIMY----------------------------YKGLGISADKSKAAS 1031
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HG 276
++L+AAE A + Y +G+GL + A +W+ +AAD A E +G
Sbjct: 1032 FFLKAAEKNNSYAQHWLGYMYLYGKGLEKNGELANQWLSKAADQNETGAIFELGKQYWYG 1091
Query: 277 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
+G+ E KA+V L+ A G A + I
Sbjct: 1092 MGVPVNPE--KAIVLLQKAGNDGHVIAQRILGYI 1123
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+A+ G RA Y L L G G + +A W AA A Y + Y G+G
Sbjct: 57 KAATEGDTRAAYPLGLLYSAGLGTPIDYDKAFYWLSIAARQNIPDAQYRLAGLYQEGKGT 116
Query: 250 PLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
S R+ W+K+AA GH AQ L +GLG+ + ++V + E A AG A
Sbjct: 117 AKSEREFAYWVKKAAGNGHIDAQRAMGMILHYGLGVHK--NLPESVKWFEKAANAGNATA 174
Query: 304 DH 305
+
Sbjct: 175 QY 176
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCL 207
A+ L +AA GD Q+ LG++Y+ + +A L +++ AQY L L
Sbjct: 342 ALPLLMRAADKGDSFAQYTLGLAYIDGNGIAKDERKAFSWLEKSASQNRASAQYFLGLMY 401
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G N ++ R A+ GYV A Y G + +ARKW + AA
Sbjct: 402 LDGTGTPVNEEKGIRLLKELAKTGYVYAQYKLGTYAHSGLHMAKDLAEARKWYQLAASQD 461
Query: 268 HGKAQLEHGLGLF----TEGEMMKAVVYLELATRAGETAA 303
H KA+ G+ LF +E + K V + A + + A
Sbjct: 462 HIKAKYWLGMSLFQGPDSEQDRKKGVYWFTEAAKQDDPDA 501
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 85/220 (38%), Gaps = 53/220 (24%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAIS 158
+ GK F +GRG ++ KA F K A GS A+ G+MY++ DK +AA S
Sbjct: 973 MFEVGKMFANGRGTERDDKKAFHWFEKAAENGSDSALTQLGIMYYKGLGISADKSKAA-S 1031
Query: 159 LYRQAAVLGDPAGQFNLGISYL-------------------------------------- 180
+ +AA + Q LG YL
Sbjct: 1032 FFLKAAEKNNSYAQHWLGYMYLYGKGLEKNGELANQWLSKAADQNETGAIFELGKQYWYG 1091
Query: 181 ------QEEAVKLLYQASIAGHVRAQYQLALCLHRG---RGVDFNLQEAARWYLRAAEGG 231
E+A+ LL +A GHV AQ L G +G+ + ++A +W+ +AA
Sbjct: 1092 MGVPVNPEKAIVLLQKAGNDGHVIAQRILGYIYADGGPEKGIPLDFEKAVQWFEKAARQD 1151
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+L G+G P + + + + ++A+ + A
Sbjct: 1152 DAAGKMGLALLTLTGKGTPKNEEKGIRLLTQSANMNYPSA 1191
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE--MDKKE--AA 156
A R GK + KN+ L+ K A++ T A+ D G +Y++ + K++ A
Sbjct: 608 ATAQYRLGKLYLKADTPLKNIPLGLEFLEKSASQNITSAIFDLGNIYYDGKIVKQDMAKA 667
Query: 157 ISLYRQAAVLGD-PAGQF-------NLGISYLQEEAVKLLYQASIAGHVRAQYQLALC-L 207
++ +++ LG P+ F G+ +E+A K+ + G Y+ LC L
Sbjct: 668 LNYFQKGTGLGHLPSQNFVGFMIENGSGVKKDKEKACKIYDETGRRGSAYGLYRYGLCQL 727
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N ++A + +AA A Y +LCY +G+G P + +A +W +RA++
Sbjct: 728 SDPDPSPENQKKAFILFEQAARKNLADAQYFLALCYEYGKGTPKNPGEAIEWYRRASEND 787
Query: 268 HGKAQLEHGLGLFT 281
+A + G+ T
Sbjct: 788 KPEALYQLGMLYIT 801
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 18/148 (12%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----- 153
E + GK++ +G GV N +KA+ K G +A G +Y + +
Sbjct: 1076 NETGAIFELGKQYWYGMGVPVNPEKAIVLLQKAGNDGHVIAQRILGYIYADGGPEKGIPL 1135
Query: 154 --EAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQL 203
E A+ + +AA D AG+ L + L +E+ ++LL Q++ + A L
Sbjct: 1136 DFEKAVQWFEKAARQDDAAGKMGLALLTLTGKGTPKNEEKGIRLLTQSANMNYPSAMELL 1195
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGG 231
+G + +EA +WY RAAE G
Sbjct: 1196 GDFYREEKG---DKKEAEKWYRRAAETG 1220
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 18/175 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+G+ KN + A K A + T A+ + G YW E AI L ++A
Sbjct: 1049 GYMYLYGKGLEKNGELANQWLSKAADQNETGAIFELGKQYWYGMGVPVNPEKAIVLLQKA 1108
Query: 164 AVLGDPAGQFNLGISYLQ-----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
G Q LG Y E+AV+ +A+ + LAL G+G
Sbjct: 1109 GNDGHVIAQRILGYIYADGGPEKGIPLDFEKAVQWFEKAARQDDAAGKMGLALLTLTGKG 1168
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N ++ R ++A Y AM Y +G ++A KW +RAA+ G
Sbjct: 1169 TPKNEEKGIRLLTQSANMNYPSAMELLGDFYREEKG---DKKEAEKWYRRAAETG 1220
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISY-----LQEEAVKLLY--QASIAGHVRAQYQLALCLH 208
AI AA DP L + Y LQ A +L+ +++ G+ AQ+ L L
Sbjct: 235 AIQWMENAATRNDPYAIRLLSMVYRHIPELQNNAKGMLHLRRSAEMGNASAQFDLGRTLF 294
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ + +EA W +AA+ RA Y +GE +P+ + +A + RAAD G
Sbjct: 295 QDKNSPAKRKEAVVWLEKAAQQDERRAQAFLGNMYYYGEFVPVDYVKALPLLMRAADKGD 354
Query: 269 GKAQLEHGL 277
AQ GL
Sbjct: 355 SFAQYTLGL 363
>gi|163800487|ref|ZP_02194388.1| Sel1 domain protein repeat-containing protein [Vibrio sp. AND4]
gi|159175930|gb|EDP60724.1| Sel1 domain protein repeat-containing protein [Vibrio sp. AND4]
Length = 993
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----- 152
L +A + G +K+G GV ++ +A+ + K A +G T+A + G MY E K
Sbjct: 38 LGDAKAQNKLGNIYKNGDGVVQDHSQAVYWYTKAAEQGHTIAQTNLGWMY-EAGKGVSQD 96
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-----KLLY---QASIAGHVRAQYQLA 204
A+ YR+AA G P Q NLG Y E V + LY +A+ + RAQ +L
Sbjct: 97 DAQAVYWYRKAAEQGYPKAQTNLGWMYEYGEGVPKDDTQALYWYRKAAEQEYARAQNRLG 156
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
G+GV + +A WY +AAE GY RA N Y GEG+P +A W K++A
Sbjct: 157 RMYDMGKGVPLDDTQAVYWYGKAAEQGYERAQNNLGTMYEEGEGVPQDMTRAVYWYKKSA 216
Query: 265 DCGHGKAQLEHG 276
D G+ Q G
Sbjct: 217 DQGYVTGQTNLG 228
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 13/189 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV ++ +A+ F K A +G + G MY E A+S YR+A
Sbjct: 300 GWMYEEGKGVPQDDIQAVFLFRKAAEQGYARGQTNLGWMYEEGKGVPQDDVQAVSWYRKA 359
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A LG GQ NLG Y + ++AV +A+ G+ R Q L +G+GV
Sbjct: 360 AELGFATGQANLGWMYREGRGVPQDNKQAVSWYRKAAEQGYARGQTNLGWMYEKGKGVPQ 419
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A WY +AAE G A N Y G+G+P ++QA W ++AA+ G+ + Q
Sbjct: 420 DDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVPQDYKQAVYWYRKAAEQGYARGQTNL 479
Query: 276 GLGLFTEGE 284
G ++ EG+
Sbjct: 480 GW-MYEEGK 487
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 22/240 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ GRGV ++ +A+ + K A +G + G MY + D K+A +S YR+
Sbjct: 372 GWMYREGRGVPQDNKQAVSWYRKAAEQGYARGQTNLGWMYEKGKGVPQDDKQA-VSWYRK 430
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVD 214
AA GD Q NLG Y + + V Y+ ++ G+ R Q L G+GV
Sbjct: 431 AAEQGDDTAQNNLGWMYEEGKGVPQDYKQAVYWYRKAAEQGYARGQTNLGWMYEEGKGVP 490
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY +AAE G N Y G+G+P +QA W ++AA+ G+ + Q
Sbjct: 491 QDDVQAVSWYRKAAEQGLATGQANLGWMYREGKGVPQDDKQAVSWYRKAAEQGYARGQTN 550
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
G ++ +G+ + +AV + A G+ A + + ++ +D V SW
Sbjct: 551 LGW-MYEKGKGVPQDDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVPQDNKQAV--SW 607
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A+ + K A +G + G MY E D K+A +S YR+
Sbjct: 480 GWMYEEGKGVPQDDVQAVSWYRKAAEQGLATGQANLGWMYREGKGVPQDDKQA-VSWYRK 538
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G GQ NLG Y + ++AV +A+ G AQ L G+GV
Sbjct: 539 AAEQGYARGQTNLGWMYEKGKGVPQDDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVP 598
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AAE G V N Y G+G+P ++QA W ++AAD G AQ
Sbjct: 599 QDNKQAVSWYRKAAEQGSVIGQVNLGWMYEQGKGVPQDNKQAVSWYQKAADQGDADAQNS 658
Query: 275 HGLGLFTEGE 284
G ++ EG+
Sbjct: 659 LG-SMYEEGK 667
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A+ + K A G + G MY E D K+A +S YR+
Sbjct: 336 GWMYEEGKGVPQDDVQAVSWYRKAAELGFATGQANLGWMYREGRGVPQDNKQA-VSWYRK 394
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G GQ NLG Y + ++AV +A+ G AQ L G+GV
Sbjct: 395 AAEQGYARGQTNLGWMYEKGKGVPQDDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVP 454
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AAE GY R N Y G+G+P QA W ++AA+ G Q
Sbjct: 455 QDYKQAVYWYRKAAEQGYARGQTNLGWMYEEGKGVPQDDVQAVSWYRKAAEQGLATGQAN 514
Query: 275 HGLGLFTEGE 284
G ++ EG+
Sbjct: 515 LGW-MYREGK 523
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A+ + K A +G + G MY + D K+A +S YR+
Sbjct: 516 GWMYREGKGVPQDDKQAVSWYRKAAEQGYARGQTNLGWMYEKGKGVPQDDKQA-VSWYRK 574
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD Q NLG Y + ++AV +A+ G V Q L +G+GV
Sbjct: 575 AAEQGDDTAQNNLGWMYEEGKGVPQDNKQAVSWYRKAAEQGSVIGQVNLGWMYEQGKGVP 634
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AA+ G A + Y G+G+ ++QA W ++AA+ GH Q
Sbjct: 635 QDNKQAVSWYQKAADQGDADAQNSLGSMYEEGKGVLQDYKQAVSWYRKAAEQGHELGQSN 694
Query: 275 HGLGLFTEG-----EMMKAVVYLELATR--AGETAADHVKNVILQQL 314
G ++TEG + +A+ + + A++ T +D + + ++ +L
Sbjct: 695 LGK-MYTEGKGVPRDATQAIYWYQKASKLEHSHTQSDAIYDNVINEL 740
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G +++G GV K+ +AL + K A + A G MY +M K A+ Y +
Sbjct: 120 GWMYEYGEGVPKDDTQALYWYRKAAEQEYARAQNRLGRMY-DMGKGVPLDDTQAVYWYGK 178
Query: 163 AAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y + E AV +++ G+V Q L +G+GV
Sbjct: 179 AAEQGYERAQNNLGTMYEEGEGVPQDMTRAVYWYKKSADQGYVTGQTNLGWMYEKGKGVP 238
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY +AA+ GY RA N Y G+G+P + QA W ++A + +AQ
Sbjct: 239 KDDTQAVSWYRKAAKQGYARAQTNLGWMYEKGKGVPQDNMQAVDWYRKAVKQDYARAQSY 298
Query: 275 HGLGLFTEGE 284
G ++ EG+
Sbjct: 299 LGW-MYEEGK 307
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G ++ G GV +++ +A+ + K A +G + G MY E K A+S YR+
Sbjct: 192 GTMYEEGEGVPQDMTRAVYWYKKSADQGYVTGQTNLGWMY-EKGKGVPKDDTQAVSWYRK 250
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y + +AV +A + RAQ L G+GV
Sbjct: 251 AAKQGYARAQTNLGWMYEKGKGVPQDNMQAVDWYRKAVKQDYARAQSYLGWMYEEGKGVP 310
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A + +AAE GY R N Y G+G+P QA W ++AA+ G Q
Sbjct: 311 QDDIQAVFLFRKAAEQGYARGQTNLGWMYEEGKGVPQDDVQAVSWYRKAAELGFATGQAN 370
Query: 275 HGLGLFTEG 283
G ++ EG
Sbjct: 371 LGW-MYREG 378
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLAL 205
E S Y Q A LGD Q LG Y +Q+ +AV +A+ GH AQ L
Sbjct: 26 EVKNSNYFQNAELGDAKAQNKLGNIYKNGDGVVQDHSQAVYWYTKAAEQGHTIAQTNLGW 85
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G+GV + +A WY +AAE GY +A N Y +GEG+P QA W ++AA+
Sbjct: 86 MYEAGKGVSQDDAQAVYWYRKAAEQGYPKAQTNLGWMYEYGEGVPKDDTQALYWYRKAAE 145
Query: 266 CGHGKAQ 272
+ +AQ
Sbjct: 146 QEYARAQ 152
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 13/191 (6%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYR 161
R G+ + G+GV + +A+ + K A +G A + G MY E + A+ Y+
Sbjct: 154 RLGRMYDMGKGVPLDDTQAVYWYGKAAEQGYERAQNNLGTMYEEGEGVPQDMTRAVYWYK 213
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
++A G GQ NLG Y + +AV +A+ G+ RAQ L +G+GV
Sbjct: 214 KSADQGYVTGQTNLGWMYEKGKGVPKDDTQAVSWYRKAAKQGYARAQTNLGWMYEKGKGV 273
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +A WY +A + Y RA Y G+G+P QA ++AA+ G+ + Q
Sbjct: 274 PQDNMQAVDWYRKAVKQDYARAQSYLGWMYEEGKGVPQDDIQAVFLFRKAAEQGYARGQT 333
Query: 274 EHGLGLFTEGE 284
G ++ EG+
Sbjct: 334 NLGW-MYEEGK 343
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
+Q + G +AQ +L G GV + +A WY +AAE G+ A N Y G+G
Sbjct: 33 FQNAELGDAKAQNKLGNIYKNGDGVVQDHSQAVYWYTKAAEQGHTIAQTNLGWMYEAGKG 92
Query: 249 LPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+ QA W ++AA+ G+ KAQ G ++ GE
Sbjct: 93 VSQDDAQAVYWYRKAAEQGYPKAQTNLGW-MYEYGE 127
>gi|391230754|ref|ZP_10266960.1| TPR repeat-containing protein [Opitutaceae bacterium TAV1]
gi|391220415|gb|EIP98835.1| TPR repeat-containing protein [Opitutaceae bacterium TAV1]
Length = 376
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQAAVLGDP 169
GRG+R++ +A+ K A +G + GL E ++K E A+ +R+AA P
Sbjct: 126 GRGIRQDPAEAVSWLRKAAEQGHANSQYFLGLALDEGVGVEKDETGAVEWWRKAAEQDHP 185
Query: 170 --------AGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
A Q +G++ + E +K Y+A+ GH AQ L L GRG + N EA
Sbjct: 186 DAQERLGYALQKGIGVTKDEAEGLKWYYKAAARGHASAQNSLGYALENGRGTEKNAAEAV 245
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
+WY AA+ G V A N +L + G G+ +A +W +++++ GH KAQ GL L T
Sbjct: 246 KWYRVAADQGQVNAQNNLALALTNGRGIAEDKIKAVEWWRKSSELGHPKAQYNLGLALIT 305
Query: 282 ----EGEMMKAVVYLELATRAGETAADH 305
E M +A ++ A G A +
Sbjct: 306 GNGVEKNMTEAAIWWRKAAEQGHAEAQN 333
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 12/175 (6%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG--LMYWEMDKKEAA--ISLYR 161
R G + G GV K+ + L + K AARG A G L +K AA + YR
Sbjct: 190 RLGYALQKGIGVTKDEAEGLKWYYKAAARGHASAQNSLGYALENGRGTEKNAAEAVKWYR 249
Query: 162 QAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA G Q NL GI+ + +AV+ ++S GH +AQY L L L G GV
Sbjct: 250 VAADQGQVNAQNNLALALTNGRGIAEDKIKAVEWWRKSSELGHPKAQYNLGLALITGNGV 309
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ N+ EAA W+ +AAE G+ A N G+G+ + +A +W+++AA+ G+
Sbjct: 310 EKNMTEAAIWWRKAAEQGHAEAQNNLGFALWTGDGIAKNQEEATRWLRKAAEQGN 364
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
Q E +A+ G+V AQ L + L GRG+ + EA W +AAE G+ + Y
Sbjct: 97 QAEVAGSYRKAAEQGNVDAQCMLGVLLMTGRGIRQDPAEAVSWLRKAAEQGHANSQYFLG 156
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLEL 294
L G G+ A +W ++AA+ H AQ L+ G+G+ T+ E Y +
Sbjct: 157 LALDEGVGVEKDETGAVEWWRKAAEQDHPDAQERLGYALQKGIGV-TKDEAEGLKWYYKA 215
Query: 295 ATRAGETAADHVKNVILQQLSATSRDRAMLV 325
A R G +A + L+ T ++ A V
Sbjct: 216 AAR-GHASAQNSLGYALENGRGTEKNAAEAV 245
>gi|295104276|emb|CBL01820.1| FOG: TPR repeat, SEL1 subfamily [Faecalibacterium prausnitzii
SL3/3]
Length = 734
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY- 147
+++ A A LR G + G+G KN+ +A + K A +G+ A G+ Y
Sbjct: 126 QAYKAAAEKYDSAEAQLRLGLCYAEGKGNEKNMVEAAKWYRKAAEQGNADAQNRLGVRYD 185
Query: 148 ----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAG 195
D KEAA Y ++A G P Q NL + Y ++AV+L Y ++I G
Sbjct: 186 RGEGVSKDVKEAA-KWYAKSAAQGHPKAQCNLALDYKTGKGVEKDLKKAVELFYNSAIQG 244
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ AQ L C + G GV+ + EA +W +AAE G A YS G+G+ +
Sbjct: 245 YANAQSNLGECYYNGEGVEQDHAEAFKWMKKAAEQGDADAQSVVGDMYSDGDGVQQDEEE 304
Query: 256 ARKWMKRAADCGHGKAQLEHGLGL 279
A+KW AA G+ AQ+++GL L
Sbjct: 305 AKKWFYLAAKQGNADAQVKYGLTL 328
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAISLYR 161
G + G GV+++ ++A F A +G+ A V GL W ++ I +R
Sbjct: 289 GDMYSDGDGVQQDEEEAKKWFYLAAKQGNADAQVKYGLTLANDDADWNDPAQQEGIKWFR 348
Query: 162 QAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA G PAGQ+ L YL +++A++ +++ AQY L C G GV
Sbjct: 349 KAAEQGHPAGQYVLAGIYLNGYGVEKDEKKAIEWYKKSAEQDFAAAQYDLGACYLNGLGV 408
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ + + A W +AAE Y A YS G G R+A +W K+AA+ G +AQ
Sbjct: 409 EEDEKRALYWVQKAAEQDYADAQVVLGNFYSEGIGAEKDERKAFEWFKKAAEQGKAEAQF 468
Query: 274 EHGLGLF----TEGEMMKAVVYLELATRAGETAADH 305
G F E + KA+ +LE A G A +
Sbjct: 469 FLGCSYFAGIGVEEDKSKAMEWLEKAAEQGNADAQN 504
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 136 STLAMVDAGLMYWEMDKKE----AAISLYRQAAVLGDPAGQFNLGISYLQ--------EE 183
S A + GL Y E E A YR+AA G+ Q LG+ Y + +E
Sbjct: 137 SAEAQLRLGLCYAEGKGNEKNMVEAAKWYRKAAEQGNADAQNRLGVRYDRGEGVSKDVKE 196
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A K +++ GH +AQ LAL G+GV+ +L++A + +A GY A N CY
Sbjct: 197 AAKWYAKSAAQGHPKAQCNLALDYKTGKGVEKDLKKAVELFYNSAIQGYANAQSNLGECY 256
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
GEG+ H +A KWMK+AA+ G AQ G ++++G+
Sbjct: 257 YNGEGVEQDHAEAFKWMKKAAEQGDADAQSVVG-DMYSDGD 296
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-KKEAAIS 158
EA L G + G GV ++ KA++ K A +G+ A G Y + + A
Sbjct: 465 EAQFFL--GCSYFAGIGVEEDKSKAMEWLEKAAEQGNADAQNKLGEYYIGVGVETRKAFE 522
Query: 159 LYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRG 210
L+++AA G Q NLG Y++ EAVK +A+ G AQY A CL G
Sbjct: 523 LFQKAAENGSKEAQRNLGKCYMKGLGVNKLPAEAVKYYKKAAEQGDAEAQYLFATCLFIG 582
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
V N+++A +Y ++A+ Y++A+ + +CY+ G G+P ++A A++ HG
Sbjct: 583 NAVTQNVKQAVEYYQKSAQQEYMKAINDLGVCYARGIGVPKDGKEALAHFGAASEGDHG 641
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM 150
+N A++ A L G+ + +G GV ++ +A K A +G A G MY +
Sbjct: 238 YNSAIQGYANAQSNL--GECYYNGEGVEQDHAEAFKWMKKAAEQGDADAQSVVGDMYSDG 295
Query: 151 D----KKEAAISLYRQAAVLGDPAGQFNLGISYL----------QEEAVKLLYQASIAGH 196
D +E A + AA G+ Q G++ Q+E +K +A+ GH
Sbjct: 296 DGVQQDEEEAKKWFYLAAKQGNADAQVKYGLTLANDDADWNDPAQQEGIKWFRKAAEQGH 355
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
QY LA G GV+ + ++A WY ++AE + A Y+ CY G G+ ++A
Sbjct: 356 PAGQYVLAGIYLNGYGVEKDEKKAIEWYKKSAEQDFAAAQYDLGACYLNGLGVEEDEKRA 415
Query: 257 RKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 303
W+++AA+ + AQ+ G G+ E + KA + + A G+ A
Sbjct: 416 LYWVQKAAEQDYADAQVVLGNFYSEGIGAEKDERKAFEWFKKAAEQGKAEA 466
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 121/289 (41%), Gaps = 40/289 (13%)
Query: 54 KSTEGHDFASLPFDV----LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGK 109
KS E DFA+ +D+ LN + + RA V K+ A + +A V+L G
Sbjct: 385 KSAE-QDFAAAQYDLGACYLNGLGVE--EDEKRALYWVQKA---AEQDYADAQVVL--GN 436
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAA 164
+ G G K+ KA + F K A +G A G Y+ E DK +A + +AA
Sbjct: 437 FYSEGIGAEKDERKAFEWFKKAAEQGKAEAQFFLGCSYFAGIGVEEDKSKA-MEWLEKAA 495
Query: 165 VLGDPAGQFNLGISYL-----QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
G+ Q LG Y+ +A +L +A+ G AQ L C +G GV+ E
Sbjct: 496 EQGNADAQNKLGEYYIGVGVETRKAFELFQKAAENGSKEAQRNLGKCYMKGLGVNKLPAE 555
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A ++Y +AAE G A Y + C G + + +QA ++ +++A
Sbjct: 556 AVKYYKKAAEQGDAEAQYLFATCLFIGNAVTQNVKQAVEYYQKSA--------------- 600
Query: 280 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
+ E MKA+ L + G K + +A+ D V DS
Sbjct: 601 --QQEYMKAINDLGVCYARGIGVPKDGKEALAHFGAASEGDHGFYVADS 647
>gi|71281812|ref|YP_269127.1| hypothetical protein CPS_2411 [Colwellia psychrerythraea 34H]
gi|71147552|gb|AAZ28025.1| conserved domain protein [Colwellia psychrerythraea 34H]
Length = 235
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 111 FKHGRGVRKNLD--KALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAA 164
F G+ KN + +A+ F K A +GS A G MY + A+ YR+AA
Sbjct: 22 FDKGKEAYKNNNYPQAITLFNKAAGQGSAKAQSYLGYMYTKGKGVKQDYTKAVDWYRKAA 81
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHV--------RAQYQLALCLHRGRGVDFN 216
G+ Q++L I Y + V Y +I H R+QY LAL + G+GV +
Sbjct: 82 EQGNARDQYSLAIIYEKGRGVAQDYNQAIEWHTKAAEQGNPRSQYHLALIYYNGKGVTQD 141
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
++A +WY +AAE G Y+ + Y G+G+ ++QA W +AA+ G KAQ G
Sbjct: 142 YKQALKWYSKAAEDGNAGVQYSLGVMYENGQGVAQDYKQAFDWYSKAAEQGDAKAQYNLG 201
Query: 277 LGLFTEGEMMKA 288
L L+ +G+ + A
Sbjct: 202 L-LYADGKGITA 212
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+GV+++ KA+D + K A +G+ ++Y + AI + +A
Sbjct: 57 GYMYTKGKGVKQDYTKAVDWYRKAAEQGNARDQYSLAIIYEKGRGVAQDYNQAIEWHTKA 116
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+P Q++L + Y ++A+K +A+ G+ QY L + G+GV
Sbjct: 117 AEQGNPRSQYHLALIYYNGKGVTQDYKQALKWYSKAAEDGNAGVQYSLGVMYENGQGVAQ 176
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ ++A WY +AAE G +A YN L Y+ G+G+ +A W K+A + G+
Sbjct: 177 DYKQAFDWYSKAAEQGDAKAQYNLGLLYADGKGITADKEKAILWSKKAEEQGY 229
>gi|228471789|ref|ZP_04056562.1| sell protein, repeat-containing domain [Capnocytophaga gingivalis
ATCC 33624]
gi|228276942|gb|EEK15637.1| sell protein, repeat-containing domain [Capnocytophaga gingivalis
ATCC 33624]
Length = 368
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 72 IAASFTLPQL-RAASLVCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKA 124
I A F+L QL V K + +A++ R+A M + +K+G GV K+ +A
Sbjct: 137 IEAQFSLGQLYEEGKDVSKDYAEAVKWYRKAAEQGNPMAQSSLAEMYKNGIGVSKDYTEA 196
Query: 125 LDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLYRQAAVLGDPAGQFNLGIS 178
+ + K A +G A G +Y+ ++ EA + YR+AA G GQFNLG
Sbjct: 197 VKWYRKAAEQGYAKAQNHLGDLYYLGYGIVSVNYTEA-VKWYRKAAEQGQEQGQFNLGKM 255
Query: 179 YLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAE 229
Y++ E +K +A+ G+V + + + G G + EA +WY +AAE
Sbjct: 256 YIEGKGVKKDFLEGIKWYKKAAEQGNVNTLIHIGMMYYEGLDGAKRDYTEAIKWYQKAAE 315
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
GY RA Y Y GEG+ +A KW ++AA GH
Sbjct: 316 QGYARAQYKVGDMYEKGEGVSKDVAEAIKWYRKAAKQGH 354
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 20/234 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVL 166
++ +GV K++ +A+ + A +G A G +Y E + K A A+ YR+AA
Sbjct: 111 YEGAKGVPKDIAEAIKWCRRLAEQGHIEAQFSLGQLYEEGKDVSKDYAEAVKWYRKAAEQ 170
Query: 167 GDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNL 217
G+P Q +L G+S EAVK +A+ G+ +AQ L + G G V N
Sbjct: 171 GNPMAQSSLAEMYKNGIGVSKDYTEAVKWYRKAAEQGYAKAQNHLGDLYYLGYGIVSVNY 230
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
EA +WY +AAE G + +N Y G+G+ + KW K+AA+ G+ + G+
Sbjct: 231 TEAVKWYRKAAEQGQEQGQFNLGKMYIEGKGVKKDFLEGIKWYKKAAEQGNVNTLIHIGM 290
Query: 278 GLFTEG------EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ EG + +A+ + + A G A + + ++ S+D A +
Sbjct: 291 -MYYEGLDGAKRDYTEAIKWYQKAAEQGYARAQYKVGDMYEKGEGVSKDVAEAI 343
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNL---------GISYLQEEAVKLLYQ 190
M G Y + A+ Y++AA G Q L G+ EA+K +
Sbjct: 71 MFKKGEEYEDTSDYAKAVKWYQKAAEKGHIEAQSALIEIYYEGAKGVPKDIAEAIKWCRR 130
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
+ GH+ AQ+ L G+ V + EA +WY +AAE G A + + Y G G+
Sbjct: 131 LAEQGHIEAQFSLGQLYEEGKDVSKDYAEAVKWYRKAAEQGNPMAQSSLAEMYKNGIGVS 190
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 293
+ +A KW ++AA+ G+ KAQ H L+ G + +V Y E
Sbjct: 191 KDYTEAVKWYRKAAEQGYAKAQ-NHLGDLYYLGYGIVSVNYTE 232
>gi|433006100|ref|ZP_20194527.1| hypothetical protein A17S_03681 [Escherichia coli KTE227]
gi|433154718|ref|ZP_20339655.1| hypothetical protein WKS_02648 [Escherichia coli KTE176]
gi|431513158|gb|ELH91243.1| hypothetical protein A17S_03681 [Escherichia coli KTE227]
gi|431672978|gb|ELJ39210.1| hypothetical protein WKS_02648 [Escherichia coli KTE176]
Length = 375
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 19/212 (8%)
Query: 88 CKSWND--ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL 145
KSW + +++ +A LL G+ + G GV ++ +A + K AA+ A V+ +
Sbjct: 101 AKSWYEKASVQNDVDAQFLL--GEMYDDGLGVGQDYQQAKMWYEKAAAQNDERAQVNLAV 158
Query: 146 MY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------AS 192
+Y E D ++A S Y +AA QF LGI Y V+ YQ A+
Sbjct: 159 LYAKGNGVEQDYRQAK-SWYEKAAAQNSSDAQFALGILYANANGVEQDYQQAKGWYEKAA 217
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
AQ+ L + ++G GV N Q+A W+ +AA + A YN Y +G+G+ S
Sbjct: 218 EQNFANAQFNLGMLYYKGEGVSQNFQQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQS 277
Query: 253 HRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+R+A++W ++AA GH AQ G+ ++ GE
Sbjct: 278 YRKAKEWFEKAAGEGHVDAQYNLGV-IYENGE 308
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 104/235 (44%), Gaps = 23/235 (9%)
Query: 68 VLNKIAASFTLPQLRAASL-------VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKN 120
V N + A F L ++ L K W + + + + G GV ++
Sbjct: 110 VQNDVDAQFLLGEMYDDGLGVGQDYQQAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQD 169
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNL 175
+A + K AA+ S+ A G++Y E D ++A Y +AA QFNL
Sbjct: 170 YRQAKSWYEKAAAQNSSDAQFALGILYANANGVEQDYQQAK-GWYEKAAEQNFANAQFNL 228
Query: 176 GISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ Y + E V +Q A+ + AQY L + G+GV + ++A W+ +A
Sbjct: 229 GMLYYKGEGVSQNFQQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRKAKEWFEKA 288
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
A G+V A YN + Y GEG+ QAR W ++AA +AQ + LG+ E
Sbjct: 289 AGEGHVDAQYNLGVIYENGEGVGQDFHQARAWYEKAAARNDAQAQFD--LGVMNE 341
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLG 176
D L G A GLMY ++D ++A I Y +AA DP Q LG
Sbjct: 27 DSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAAAQNDPRAQVKLG 85
Query: 177 ISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+ Y V YQ AS+ V AQ+ L G GV + Q+A WY +AA
Sbjct: 86 LMYANGLGVNQDYQQAKSWYEKASVQNDVDAQFLLGEMYDDGLGVGQDYQQAKMWYEKAA 145
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
RA N ++ Y+ G G+ +RQA+ W ++AA AQ G+
Sbjct: 146 AQNDERAQVNLAVLYAKGNGVEQDYRQAKSWYEKAAAQNSSDAQFALGI 194
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 12/193 (6%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + + G + + GV ++ +A + K A + A + G++Y
Sbjct: 173 AKSWYEKAAAQNSSDAQFALGILYANANGVEQDYQQAKGWYEKAAEQNFANAQFNLGMLY 232
Query: 148 WEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAG 195
++ + + A + +AA Q+NLG Y + V Y +A+ G
Sbjct: 233 YKGEGVSQNFQQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRKAKEWFEKAAGEG 292
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
HV AQY L + G GV + +A WY +AA +A ++ + G+G ++ +Q
Sbjct: 293 HVDAQYNLGVIYENGEGVGQDFHQARAWYEKAAARNDAQAQFDLGVMNELGQGGSINLKQ 352
Query: 256 ARKWMKRAADCGH 268
AR W A G+
Sbjct: 353 ARTWFGLACKNGN 365
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 145 LMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGH 196
++Y + +++ +S + A GD Q+ LG+ YL E + + YQ A+
Sbjct: 18 IVYAAISDRDSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAAAQND 77
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
RAQ +L L G GV+ + Q+A WY +A+ V A + Y G G+ ++QA
Sbjct: 78 PRAQVKLGLMYANGLGVNQDYQQAKSWYEKASVQNDVDAQFLLGEMYDDGLGVGQDYQQA 137
Query: 257 RKWMKRAADCGHGKAQL 273
+ W ++AA +AQ+
Sbjct: 138 KMWYEKAAAQNDERAQV 154
>gi|187735941|ref|YP_001878053.1| Sel1 domain-containing protein repeat-containing protein
[Akkermansia muciniphila ATCC BAA-835]
gi|187425993|gb|ACD05272.1| Sel1 domain protein repeat-containing protein [Akkermansia
muciniphila ATCC BAA-835]
Length = 380
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE 154
L L G + +G G ++ DKA + K A +G A D G Y ++K E
Sbjct: 67 LGHVTAQLNLGWAYSNGIGAPQDNDKAFYWYRKAAEQGHPTAQFDLGFCYVNGLGVEKDE 126
Query: 155 -AAISLYRQAAVLGDPAGQFNLGISYLQ-------EEAVKLLYQASIAGHVRAQYQLALC 206
AI Y++AA G Q NLG Y E+AV QA+ G RAQY LA C
Sbjct: 127 HQAIGWYKKAAEQGHAVAQLNLGWIYANSPSRKNWEQAVYWYKQAAEQGDPRAQYNLAWC 186
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G G N ++AA WY AA + A YN CY G G+ +A W ++A
Sbjct: 187 YGNGSGTPKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVEPDLDKALVWYHKSALQ 246
Query: 267 GHGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETAA 303
G AQ +G G E +M KAV + A G T A
Sbjct: 247 GQITAQYTLGWCYGNGRGMEVDMAKAVHWYTKAAEQGHTTA 287
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 55/246 (22%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK---EAAISLYRQAAVLG 167
+ +G GV K+ +A+ + K A +G +A ++ G +Y + E A+ Y+QAA G
Sbjct: 116 YVNGLGVEKDEHQAIGWYKKAAEQGHAVAQLNLGWIYANSPSRKNWEQAVYWYKQAAEQG 175
Query: 168 DPAGQFNLG---------------ISYLQEEA---------------------------- 184
DP Q+NL +Y EEA
Sbjct: 176 DPRAQYNLAWCYGNGSGTPKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVEPDLDK 235
Query: 185 -VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
+ +++++ G + AQY L C GRG++ ++ +A WY +AAE G+ A N C+
Sbjct: 236 ALVWYHKSALQGQITAQYTLGWCYGNGRGMEVDMAKAVHWYTKAAEQGHTTAQLNLGWCH 295
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLELATR 297
G+G P++ +A KW +AA+ G+ A HG G+ E + +A + + A R
Sbjct: 296 LNGKGTPVNREKALKWYLKAAEQGNATAMFNVGNCYAHGYGI--EQDDKQAEEWYQKAVR 353
Query: 298 AGETAA 303
G A
Sbjct: 354 HGNKKA 359
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 82/203 (40%), Gaps = 47/203 (23%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-----EEAVKLLY---QASIAGHVRAQYQ 202
+ ++ A Y+QAA LG Q NLG +Y ++ K Y +A+ GH AQ+
Sbjct: 52 ENQQEAFYCYQQAAELGHVTAQLNLGWAYSNGIGAPQDNDKAFYWYRKAAEQGHPTAQFD 111
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYV----------------------------- 233
L C G GV+ + +A WY +AAE G+
Sbjct: 112 LGFCYVNGLGVEKDEHQAIGWYKKAAEQGHAVAQLNLGWIYANSPSRKNWEQAVYWYKQA 171
Query: 234 ------RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEG 283
RA YN + CY G G P + R+A W + AA H AQ G G E
Sbjct: 172 AEQGDPRAQYNLAWCYGNGSGTPKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVEP 231
Query: 284 EMMKAVVYLELATRAGETAADHV 306
++ KA+V+ + G+ A +
Sbjct: 232 DLDKALVWYHKSALQGQITAQYT 254
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 152 KKEAAISLY-------RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGH 196
++E +S Y +Q A+ GD F L I+Y Q +EA QA+ GH
Sbjct: 10 EQENTVSTYSVDVETLQQIALKGDAQALFQLAINYEQGRGVAENQQEAFYCYQQAAELGH 69
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
V AQ L G G + +A WY +AAE G+ A ++ CY G G+ QA
Sbjct: 70 VTAQLNLGWAYSNGIGAPQDNDKAFYWYRKAAEQGHPTAQFDLGFCYVNGLGVEKDEHQA 129
Query: 257 RKWMKRAADCGHGKAQLEHG 276
W K+AA+ GH AQL G
Sbjct: 130 IGWYKKAAEQGHAVAQLNLG 149
>gi|416242044|ref|ZP_11633178.1| tetratricopeptide repeat family protein [Moraxella catarrhalis BC7]
gi|326571605|gb|EGE21620.1| tetratricopeptide repeat family protein [Moraxella catarrhalis BC7]
Length = 302
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G+GVR++ K+++ + K A +G A + LMY + D A + +A
Sbjct: 79 GVMYYEGQGVRQDYYKSVEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKA 138
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G QF+LG+ Y + + V+ Y +A+ G+ AQ+ LAL + G+GV
Sbjct: 139 ANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLALMYYEGQGVRQ 198
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ QEA WY +AA G+ A YN + Y G+G+ + +A +W +AA+ G +AQ
Sbjct: 199 DDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYHKAVEWFTKAANQGFAQAQNNL 258
Query: 276 GLGLFTEGEMMK 287
G+ ++ EG+ ++
Sbjct: 259 GV-MYDEGQGVR 269
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNL 175
N KA + + K A +G A + G+MY+E ++ Y +AA G QFNL
Sbjct: 55 NHAKAFEWYTKAANQGEAEAQHNLGVMYYEGQGVRQDYYKSVEWYTKAAKQGYADAQFNL 114
Query: 176 GISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ Y Q + V+ Y +A+ G AQ+ L + G+GV + +A WY +A
Sbjct: 115 ALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKA 174
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
A GY A +N +L Y G+G+ ++A +W +AA GH +AQ G+ ++ EG+ ++
Sbjct: 175 ANQGYAGAQFNLALMYYEGQGVRQDDQEAVEWYTKAAGQGHAEAQYNLGV-MYYEGQGVR 233
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G GVR++ KA + F K A +G A G+MY E A+ Y +AA
Sbjct: 118 YAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQ 177
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G QFNL + Y + +EAV+ +A+ GH AQY L + + G+GV +
Sbjct: 178 GYAGAQFNLALMYYEGQGVRQDDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYH 237
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+A W+ +AA G+ +A N + Y G+G+ + A+ + +A D G
Sbjct: 238 KAVEWFTKAANQGFAQAQNNLGVMYDEGQGVRQNIATAKIYYGQACDHG 286
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQA 191
A G +A D Y++ A Y +AA G+ Q NLG+ Y + + V+ Y
Sbjct: 35 AQSGGAVAQSDLADEYYQQGNHAKAFEWYTKAANQGEAEAQHNLGVMYYEGQGVRQDYYK 94
Query: 192 SIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
S+ G+ AQ+ LAL +G GV + +A W+ +AA G A ++ + Y
Sbjct: 95 SVEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMY 154
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
G+G+ + +A +W +AA+ G+ AQ L ++ EG+ ++
Sbjct: 155 DEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLAL-MYYEGQGVR 197
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 167 GDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
G Q +L Y Q+ +A + +A+ G AQ+ L + + G+GV + ++
Sbjct: 38 GGAVAQSDLADEYYQQGNHAKAFEWYTKAANQGEAEAQHNLGVMYYEGQGVRQDYYKSVE 97
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
WY +AA+ GY A +N +L Y+ G+G+ + +A +W +AA+ G +AQ G+ ++ E
Sbjct: 98 WYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGV-MYDE 156
Query: 283 GEMMKAVVY--LELATRA 298
G+ ++ Y +E T+A
Sbjct: 157 GQGVRQDYYKAVEWYTKA 174
>gi|296112632|ref|YP_003626570.1| hypothetical protein MCR_0405 [Moraxella catarrhalis RH4]
gi|295920326|gb|ADG60677.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
BBH18]
Length = 302
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G+GVR++ K+++ + K A +G A + LMY + D A + +A
Sbjct: 79 GVMYYEGQGVRQDYYKSVEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKA 138
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G QF+LG+ Y + + V+ Y +A+ G+ AQ+ LAL + G+GV
Sbjct: 139 ANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLALMYYEGQGVRQ 198
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ QEA WY +AA G+ A YN + Y G+G+ + +A +W +AA+ G +AQ
Sbjct: 199 DDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYHKAVEWFTKAANQGFAQAQNNL 258
Query: 276 GLGLFTEGEMMK 287
G+ ++ EG+ ++
Sbjct: 259 GV-MYDEGQGVR 269
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNL 175
N KA + + K A +G A + G+MY+E ++ Y +AA G QFNL
Sbjct: 55 NHAKAFEWYTKAANQGEAEAQHNLGVMYYEGQGVRQDYYKSVEWYTKAAKQGYADAQFNL 114
Query: 176 GISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ Y Q + V+ Y +A+ G AQ+ L + G+GV + +A WY +A
Sbjct: 115 ALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKA 174
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
A GY A +N +L Y G+G+ ++A +W +AA GH +AQ G+ ++ EG+ ++
Sbjct: 175 ANQGYAGAQFNLALMYYEGQGVRQDDQEAVEWYTKAAGQGHAEAQYNLGV-MYYEGQGVR 233
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G GVR++ KA + F K A +G A G+MY E A+ Y +AA
Sbjct: 118 YAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQ 177
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G QFNL + Y + +EAV+ +A+ GH AQY L + + G+GV +
Sbjct: 178 GYAGAQFNLALMYYEGQGVRQDDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYH 237
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+A W+ +AA G+ +A N + Y G+G+ + A+ + +A D G
Sbjct: 238 KAVEWFTKAANQGFAQAQNNLGVMYDEGQGVRQNIATAKIYYGQACDHG 286
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQA 191
A G +A D Y++ A Y +AA G+ Q NLG+ Y + + V+ Y
Sbjct: 35 AQSGGAVAQSDLADEYYQQGNHAKAFEWYTKAANQGEAEAQHNLGVMYYEGQGVRQDYYK 94
Query: 192 SIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
S+ G+ AQ+ LAL +G GV + +A W+ +AA G A ++ + Y
Sbjct: 95 SVEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMY 154
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
G+G+ + +A +W +AA+ G+ AQ L ++ EG+ ++
Sbjct: 155 DEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLAL-MYYEGQGVR 197
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 167 GDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
G Q +L Y Q+ +A + +A+ G AQ+ L + + G+GV + ++
Sbjct: 38 GGAVAQSDLADEYYQQGNHAKAFEWYTKAANQGEAEAQHNLGVMYYEGQGVRQDYYKSVE 97
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
WY +AA+ GY A +N +L Y+ G+G+ + +A +W +AA+ G +AQ G+ ++ E
Sbjct: 98 WYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGV-MYDE 156
Query: 283 GEMMKAVVY--LELATRA 298
G+ ++ Y +E T+A
Sbjct: 157 GQGVRQDYYKAVEWYTKA 174
>gi|339481796|ref|YP_004693582.1| Sel1 domain-containing protein [Nitrosomonas sp. Is79A3]
gi|338803941|gb|AEJ00183.1| Sel1 domain protein repeat-containing protein [Nitrosomonas sp.
Is79A3]
Length = 200
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A S YR+AA G QFNLG +Y + E V Y +++ G AQY L
Sbjct: 20 AASWYRKAAEQGHTGAQFNLGNAYYKGEGVSKDYAQAVSWYRKAAEQGLAVAQYSLGNEY 79
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+RG+ V + +AA W+ +AAE GY RA Y+ + Y GEG+P +A W + AA+ G
Sbjct: 80 YRGKAVPKDYVQAASWFRKAAEQGYDRAQYDLGMLYVSGEGVPQDDAKAASWFREAAEQG 139
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVI--LQQLSATSR 319
H AQ + LGLF E ++++A + A G A + ++ L++LS ++
Sbjct: 140 HAGAQYD--LGLFYESGKGVPYDLVQAKSWYRKAADQGHVKAKGILEILGRLEKLSRETK 197
Query: 320 DR 321
+
Sbjct: 198 GK 199
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
G+FN G+S +A +A+ GH AQ+ L ++G GV + +A WY +AAE
Sbjct: 8 GRFN-GVSKDYAQAASWYRKAAEQGHTGAQFNLGNAYYKGEGVSKDYAQAVSWYRKAAEQ 66
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM---- 286
G A Y+ Y G+ +P + QA W ++AA+ G+ +AQ + G+ L+ GE +
Sbjct: 67 GLAVAQYSLGNEYYRGKAVPKDYVQAASWFRKAAEQGYDRAQYDLGM-LYVSGEGVPQDD 125
Query: 287 -KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
KA + A G A + + + D ++ SW
Sbjct: 126 AKAASWFREAAEQGHAGAQYDLGLFYESGKGVPYD--LVQAKSW 167
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 24/128 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+ V K+ +A F K A +G A D G++Y V G
Sbjct: 76 GNEYYRGKAVPKDYVQAASWFRKAAEQGYDRAQYDLGMLY-----------------VSG 118
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ G+ +A +A+ GH AQY L L G+GV ++L +A WY +A
Sbjct: 119 E-------GVPQDDAKAASWFREAAEQGHAGAQYDLGLFYESGKGVPYDLVQAKSWYRKA 171
Query: 228 AEGGYVRA 235
A+ G+V+A
Sbjct: 172 ADQGHVKA 179
>gi|348590324|ref|YP_004874786.1| hypothetical protein TASI_1004 [Taylorella asinigenitalis MCE3]
gi|347974228|gb|AEP36763.1| hypothetical protein TASI_1004 [Taylorella asinigenitalis MCE3]
Length = 342
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 95 LRPLRE------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
L P+ E A G + G GV KN +++ + K AA+G A+ + G MY
Sbjct: 76 LGPIEERANKGDAHYQFELGYMYFKGEGVTKNYTQSVQWYEKSAAQGFVHALNNLGYMYL 135
Query: 149 ---EMDKK-EAAISLYRQAAVLGDPAGQFNLGISY-----LQEEAVK---LLYQASIAGH 196
+DK + A + +A+ G P +NLG Y ++ A K L A+ AG+
Sbjct: 136 MGLGVDKDYKKAFENFEKASTKGFPEAIYNLGYMYQKGWGVEPNATKARDLFETAATAGN 195
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
V A + L LC GRG D + ++A +WY +AA G+V A N Y G+G+ + +A
Sbjct: 196 VSAMFNLGLCYQFGRGTDKDAKKAKQWYEKAANAGHVLAQRNLGYLYEKGDGIDHDYDEA 255
Query: 257 RKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELA 295
+W K+AA AQ G G T A + +LA
Sbjct: 256 MEWYKKAAQKNEPIAQYNVGALYENGKGTTKNFKNATTWYQLA 298
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AIS 158
L G + G GV K+ KA ++F K + +G A+ + G MY W ++ A
Sbjct: 126 ALNNLGYMYLMGLGVDKDYKKAFENFEKASTKGFPEAIYNLGYMYQKGWGVEPNATKARD 185
Query: 159 LYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRG 210
L+ AA G+ + FNLG+ Y ++A + +A+ AGHV AQ L +G
Sbjct: 186 LFETAATAGNVSAMFNLGLCYQFGRGTDKDAKKAKQWYEKAANAGHVLAQRNLGYLYEKG 245
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G+D + EA WY +AA+ A YN Y G+G + + A W + A D
Sbjct: 246 DGIDHDYDEAMEWYKKAAQKNEPIAQYNVGALYENGKGTTKNFKNATTWYQLACD 300
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 50/203 (24%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLY------------------------------------- 189
GD QF LG Y + E V Y
Sbjct: 86 GDAHYQFELGYMYFKGEGVTKNYTQSVQWYEKSAAQGFVHALNNLGYMYLMGLGVDKDYK 145
Query: 190 -------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+AS G A Y L +G GV+ N +A + AA G V AM+N LC
Sbjct: 146 KAFENFEKASTKGFPEAIYNLGYMYQKGWGVEPNATKARDLFETAATAGNVSAMFNLGLC 205
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATR 297
Y FG G ++A++W ++AA+ GH AQ G L+ +G+ + +A+ + + A +
Sbjct: 206 YQFGRGTDKDAKKAKQWYEKAANAGHVLAQRNLGY-LYEKGDGIDHDYDEAMEWYKKAAQ 264
Query: 298 AGETAADHVKNVILQQLSATSRD 320
E A + + + T+++
Sbjct: 265 KNEPIAQYNVGALYENGKGTTKN 287
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 14/146 (9%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAI 157
+ G ++ G GV N KA D F A G+ AM + GL Y + D K+A
Sbjct: 162 AIYNLGYMYQKGWGVEPNATKARDLFETAATAGNVSAMFNLGLCYQFGRGTDKDAKKAK- 220
Query: 158 SLYRQAAVLGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHR 209
Y +AA G Q NLG I + +EA++ +A+ AQY +
Sbjct: 221 QWYEKAANAGHVLAQRNLGYLYEKGDGIDHDYDEAMEWYKKAAQKNEPIAQYNVGALYEN 280
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRA 235
G+G N + A WY A + + A
Sbjct: 281 GKGTTKNFKNATTWYQLACDNKFESA 306
>gi|189502235|ref|YP_001957952.1| hypothetical protein Aasi_0852 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497676|gb|ACE06223.1| hypothetical protein Aasi_0852 [Candidatus Amoebophilus asiaticus
5a2]
Length = 789
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 58/256 (22%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISL 159
L+ G ++ +G GV ++ KA++ F K A +G+ A + G+MY E D ++ +
Sbjct: 378 LKVGAKYFNGEGVAQDYIKAVEWFQKAANQGNLDAQYNLGVMYGNGKGVEKDARKE-LEW 436
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGR 211
Y +AA GD + Q+NLG Y + V Y +A+ G AQ+ L + +GR
Sbjct: 437 YERAARKGDASAQYNLGQIYANGQGVAKDYVKAIEWYEKAANQGDASAQFNLGVMYGKGR 496
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMY---------------------------------- 237
GV+ + ++A WY +AA+ GY A Y
Sbjct: 497 GVEKDEKKAVEWYKKAADQGYAPAQYSLGCMYANVQRVVKNDKKAIEWYKKAANQRHAEA 556
Query: 238 --NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAV 289
N + Y+ G G+ ++A KW K+AAD G+ KAQ E+G G+ + + KAV
Sbjct: 557 QSNLGIMYANGRGIAKDEKKAVKWYKKAADQGNAKAQFYLGVRYENGRGVAKDEK--KAV 614
Query: 290 VYLELATRAGETAADH 305
+ E A G T A +
Sbjct: 615 EWYEKAAEQGHTGAQN 630
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ + +G+GV K+ KA++ + K A +G A + G+MY E D+K+ A+ Y++
Sbjct: 453 GQIYANGQGVAKDYVKAIEWYEKAANQGDASAQFNLGVMYGKGRGVEKDEKK-AVEWYKK 511
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q++LG Y ++A++ +A+ H AQ L + GRG+
Sbjct: 512 AADQGYAPAQYSLGCMYANVQRVVKNDKKAIEWYKKAANQRHAEAQSNLGIMYANGRGIA 571
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 272
+ ++A +WY +AA+ G +A + + Y G G+ ++A +W ++AA+ GH AQ
Sbjct: 572 KDEKKAVKWYKKAADQGNAKAQFYLGVRYENGRGVAKDEKKAVEWYEKAAEQGHTGAQNN 631
Query: 273 ----LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 305
E+G G+ + +KAV + E G A +
Sbjct: 632 LGDMYENGKGVAK--DYVKAVEWFEKVANQGHALAQY 666
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 95/196 (48%), Gaps = 16/196 (8%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM 150
W + +A G + GRGV K+ KA++ + K A +G A G MY +
Sbjct: 472 WYEKAANQGDASAQFNLGVMYGKGRGVEKDEKKAVEWYKKAADQGYAPAQYSLGCMYANV 531
Query: 151 ------DKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGH 196
DKK AI Y++AA Q NLGI Y +++AVK +A+ G+
Sbjct: 532 QRVVKNDKK--AIEWYKKAANQRHAEAQSNLGIMYANGRGIAKDEKKAVKWYKKAADQGN 589
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+AQ+ L + GRGV + ++A WY +AAE G+ A N Y G+G+ + +A
Sbjct: 590 AKAQFYLGVRYENGRGVAKDEKKAVEWYEKAAEQGHTGAQNNLGDMYENGKGVAKDYVKA 649
Query: 257 RKWMKRAADCGHGKAQ 272
+W ++ A+ GH AQ
Sbjct: 650 VEWFEKVANQGHALAQ 665
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++ G+GV K+ A++ + K A +G A + G+MY E D +A I Y +
Sbjct: 309 GVMYEKGQGVAKDARNAVEWYQKAANQGHARAQFELGMMYDYGKGVEKDTSKA-IEWYEK 367
Query: 163 AAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q +G Y E AV+ +A+ G++ AQY L + G+GV+
Sbjct: 368 AANQGHADAQLKVGAKYFNGEGVAQDYIKAVEWFQKAANQGNLDAQYNLGVMYGNGKGVE 427
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++ WY RAA G A YN Y+ G+G+ + +A +W ++AA+ G AQ
Sbjct: 428 KDARKELEWYERAARKGDASAQYNLGQIYANGQGVAKDYVKAIEWYEKAANQGDASAQFN 487
Query: 275 ----HGLGLFTEGEMMKAVVYLELATRAGETAADH 305
+G G E + KAV + + A G A +
Sbjct: 488 LGVMYGKGRGVEKDEKKAVEWYKKAADQGYAPAQY 522
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
H AQY++ + +G+GV + + A WY +AA G+ RA + + Y +G+G+ +
Sbjct: 301 HAHAQYKVGVMYEKGQGVAKDARNAVEWYQKAANQGHARAQFELGMMYDYGKGVEKDTSK 360
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFT-EG---EMMKAVVYLELATRAGETAADHVKNVIL 311
A +W ++AA+ GH AQL+ G F EG + +KAV + + A G A + V+
Sbjct: 361 AIEWYEKAANQGHADAQLKVGAKYFNGEGVAQDYIKAVEWFQKAANQGNLDAQYNLGVMY 420
Query: 312 QQLSATSRD 320
+D
Sbjct: 421 GNGKGVEKD 429
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE- 149
W R A G + +GRG+ K+ KA+ + K A +G+ A G+ Y
Sbjct: 544 WYKKAANQRHAEAQSNLGIMYANGRGIAKDEKKAVKWYKKAADQGNAKAQFYLGVRYENG 603
Query: 150 ----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHV 197
D+K+A + Y +AA G Q NLG Y + V Y ++ GH
Sbjct: 604 RGVAKDEKKA-VEWYEKAAEQGHTGAQNNLGDMYENGKGVAKDYVKAVEWFEKVANQGHA 662
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQY LA G+GV N QEA +WY ++A G A Y G G+ + QA
Sbjct: 663 LAQYNLARMYDYGQGVVQNYQEAVKWYEKSAGQGNNYAKAYLGRMYYHGFGVEKNLLQAS 722
Query: 258 KWMKRAADCGHGKAQLEHG 276
K ++ A H K++ E G
Sbjct: 723 KLIQEA--ISHMKSKAEEG 739
>gi|384491727|gb|EIE82923.1| hypothetical protein RO3G_07628 [Rhizopus delemar RA 99-880]
Length = 644
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
E + + G ++ G GV KN+++A+ + A +G+ G Y E+D +E
Sbjct: 234 ETVAIYNIGYCYEEGIGVEKNVNEAIRWYRLSAEQGNAFGQNSLGYCYEDGIGVEVDFQE 293
Query: 155 AAISLYRQAAVLGDPAGQFNLGISY-----LQEEAVKLLY---QASIAGHVRAQYQLALC 206
A + Y+ +A G P + NLG Y ++++ V Y +A++ GH RAQ+ L C
Sbjct: 294 A-VKWYKLSAEQGYPWAECNLGYCYQNGIGVEKDDVLGSYWYKKAALQGHARAQHNLGFC 352
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G G++ N +EA +WY R+AE G + A ++ CY G G+ ++ +++ W +A+
Sbjct: 353 YQNGIGIERNEKEAVKWYRRSAERGNIFAYHSLGYCYQNGIGVDVNEQESFFWYCLSAEE 412
Query: 267 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
H AQL G G+ + +AV + + + G A + ++ +D
Sbjct: 413 NHPPAQLSLGYCYRNGIGVAKDESEAVKWFKKSAEHGNALAQNSLGFCYEEGIGLKKDPV 472
Query: 323 MLV 325
+ V
Sbjct: 473 LAV 475
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 12/175 (6%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEA--AISLY 160
L G +++G GV K+ +A+ F K A G+ LA G Y E KK+ A+ Y
Sbjct: 419 LSLGYCYRNGIGVAKDESEAVKWFKKSAEHGNALAQNSLGFCYEEGIGLKKDPVLAVYWY 478
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++A +P Q NLG Y ++AVK +A+ H RA +L + L G G
Sbjct: 479 HKSAQQNNPWAQCNLGYCYANGMGVQKDDKKAVKWYRRAAEQNHSRALDKLGIHLQNGLG 538
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
V+ NL+EA + +AAE G+V A Y+ C+ G G + R+A W +RAA G
Sbjct: 539 VERNLEEAFEMFKKAAEQGHVSAQYHLGSCFEKGLGCTIDLRKAIDWFERAALAG 593
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+++G G+ +N +A+ + + A RG+ A G Y +++++E+ Y +A
Sbjct: 353 YQNGIGIERNEKEAVKWYRRSAERGNIFAYHSLGYCYQNGIGVDVNEQESFF-WYCLSAE 411
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
P Q +LG Y + EAVK +++ G+ AQ L C G G+ +
Sbjct: 412 ENHPPAQLSLGYCYRNGIGVAKDESEAVKWFKKSAEHGNALAQNSLGFCYEEGIGLKKDP 471
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA------ 271
A WY ++A+ A N CY+ G G+ ++A KW +RAA+ H +A
Sbjct: 472 VLAVYWYHKSAQQNNPWAQCNLGYCYANGMGVQKDDKKAVKWYRRAAEQNHSRALDKLGI 531
Query: 272 QLEHGLGLFTEGEMMKAVVYLELATRAGETAAD-HVKNVILQQLSAT 317
L++GLG+ E + +A + A G +A H+ + + L T
Sbjct: 532 HLQNGLGV--ERNLEEAFEMFKKAAEQGHVSAQYHLGSCFEKGLGCT 576
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQ 202
D+K+A Y+ +A G GQ LG Y + EA++ ++ G A Y
Sbjct: 182 DEKQA-FRWYKASAEQGHARGQSILGYCYGEGLGVKKDVVEAMRWYKLSANQGETVAIYN 240
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ C G GV+ N+ EA RWY +AE G + CY G G+ + ++A KW K
Sbjct: 241 IGYCYEEGIGVEKNVNEAIRWYRLSAEQGNAFGQNSLGYCYEDGIGVEVDFQEAVKWYKL 300
Query: 263 AADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATS 318
+A+ G+ A+ G G+ E + + + + A G A H Q
Sbjct: 301 SAEQGYPWAECNLGYCYQNGIGVEKDDVLGSYWYKKAALQGHARAQHNLGFCYQNGIGIE 360
Query: 319 RDRAMLV 325
R+ V
Sbjct: 361 RNEKEAV 367
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A++ H AQY L +C H G + + ++A RWY +AE G+ R CY G G+
Sbjct: 157 ATLHQHPAAQYALGVCYHDGIALQRDEKQAFRWYKASAEQGHARGQSILGYCYGEGLGVK 216
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG 299
+A +W K +A+ G A G G+ E + +A+ + L+ G
Sbjct: 217 KDVVEAMRWYKLSANQGETVAIYNIGYCYEEGIGVEKNVNEAIRWYRLSAEQG 269
>gi|445499600|ref|ZP_21466455.1| Sel-1-like protein [Janthinobacterium sp. HH01]
gi|444789595|gb|ELX11143.1| Sel-1-like protein [Janthinobacterium sp. HH01]
Length = 531
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 89/179 (49%), Gaps = 12/179 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ +G+GV ++ KALD + K A +G A + GL Y E A YR+AA
Sbjct: 259 YDNGQGVPRDEQKALDWYRKAAEQGHAAAQNNLGLRYDHGQGVAQDYEQAQFWYRKAAEQ 318
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G P Q++LG+ Y +EA+ +A+ GH+RAQ+ L L GRGV + +
Sbjct: 319 GFPGAQYHLGMLYDAGHGVVQDHQEAIFWYRKAADQGHLRAQFDLGLRYETGRGVPRDDR 378
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A WY RAAE Y A YN L + +G QA W +AA+ GH AQ GL
Sbjct: 379 KAMAWYRRAAEQDYAAAQYNLGLLFDKDDGPQPDCAQANGWYAKAAEQGHALAQFTLGL 437
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 97/182 (53%), Gaps = 12/182 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G R+ +G+GV +++ +A+ + K A +G A + L + + D + AI YR+A
Sbjct: 184 GLRYDNGQGVPQDVGQAMSWYRKAADQGYAPAQFNLALRFDKGDGIAQDSQKAILWYRRA 243
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A + QFNLG+ Y +++A+ +A+ GH AQ L L G+GV
Sbjct: 244 AEQDHASSQFNLGLIYDNGQGVPRDEQKALDWYRKAAEQGHAAAQNNLGLRYDHGQGVAQ 303
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A WY +AAE G+ A Y+ + Y G G+ H++A W ++AAD GH +AQ +
Sbjct: 304 DYEQAQFWYRKAAEQGFPGAQYHLGMLYDAGHGVVQDHQEAIFWYRKAADQGHLRAQFDL 363
Query: 276 GL 277
GL
Sbjct: 364 GL 365
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 20/231 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G+GV ++ + A+ + + A G A + G+MY E + +EAA + Y+
Sbjct: 40 GFMYFNGQGVAQSYELAVVWYRQAAQSGLEHAQYNLGVMYQKGQGVEQNYQEAA-AWYQL 98
Query: 163 AAVLGDPAGQFNLGISY-----LQEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVD 214
AA G A Q+NLG Y L + K +Y +A+ G AQ L + G+GV
Sbjct: 99 AAEQGYAAAQYNLGWLYAKGQGLDADTQKAMYWFSKAADQGDAGAQNNLGMMYDTGKGVP 158
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AAE GY RA +N L Y G+G+P QA W ++AAD G+ AQ
Sbjct: 159 QDFKQAIAWYRKAAEQGYPRAQFNLGLRYDNGQGVPQDVGQAMSWYRKAADQGYAPAQFN 218
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
L F +G+ + KA+++ A ++ +I RD
Sbjct: 219 LAL-RFDKGDGIAQDSQKAILWYRRAAEQDHASSQFNLGLIYDNGQGVPRD 268
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQ+ L G+GV + + A WY +AA+ G A YN + Y G+G+ +++
Sbjct: 31 GVANAQHSLGFMYFNGQGVAQSYELAVVWYRQAAQSGLEHAQYNLGVMYQKGQGVEQNYQ 90
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAA 303
+A W + AA+ G+ AQ G L+ +G+ + KA+ + A G+ A
Sbjct: 91 EAAAWYQLAAEQGYAAAQYNLGW-LYAKGQGLDADTQKAMYWFSKAADQGDAGA 143
>gi|300940986|ref|ZP_07155510.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
gi|300454310|gb|EFK17803.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
Length = 375
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 19/212 (8%)
Query: 88 CKSWND--ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL 145
KSW + +++ +A LL G+ + G GV ++ +A + K AA+ A V+ +
Sbjct: 101 AKSWYEKASVQNDVDAQFLL--GEMYDDGLGVGQDYQQAKMWYEKAAAQNDERAQVNLAV 158
Query: 146 MY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------AS 192
+Y E D ++A S Y +AA QF LGI Y V+ YQ A+
Sbjct: 159 LYAKGNGVEQDYRQAK-SWYEKAAAQNSSDAQFALGILYANANGVEQDYQQAKDWYEKAA 217
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
AQ+ L + ++G GV N Q+A W+ +AA + A YN Y +G+G+ S
Sbjct: 218 EQNFANAQFNLGMLYYKGDGVSQNFQQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQS 277
Query: 253 HRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+R+A++W ++AA GH AQ G+ ++ GE
Sbjct: 278 YRKAKEWFEKAAGEGHVDAQYNLGV-IYENGE 308
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 23/235 (9%)
Query: 68 VLNKIAASFTLPQLRAASL-------VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKN 120
V N + A F L ++ L K W + + + + G GV ++
Sbjct: 110 VQNDVDAQFLLGEMYDDGLGVGQDYQQAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQD 169
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNL 175
+A + K AA+ S+ A G++Y E D ++A Y +AA QFNL
Sbjct: 170 YRQAKSWYEKAAAQNSSDAQFALGILYANANGVEQDYQQAK-DWYEKAAEQNFANAQFNL 228
Query: 176 GISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ Y + + V +Q A+ + AQY L + G+GV + ++A W+ +A
Sbjct: 229 GMLYYKGDGVSQNFQQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRKAKEWFEKA 288
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
A G+V A YN + Y GEG+ QAR W ++AA +AQ + LG+ E
Sbjct: 289 AGEGHVDAQYNLGVIYENGEGVGQDFHQARAWYEKAAARNDAQAQFD--LGVMNE 341
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 12/193 (6%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 173 AKSWYEKAAAQNSSDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 232
Query: 148 WEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAG 195
++ D + A + +AA Q+NLG Y + V Y +A+ G
Sbjct: 233 YKGDGVSQNFQQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRKAKEWFEKAAGEG 292
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
HV AQY L + G GV + +A WY +AA +A ++ + G+G ++ +Q
Sbjct: 293 HVDAQYNLGVIYENGEGVGQDFHQARAWYEKAAARNDAQAQFDLGVMNELGQGGSINLKQ 352
Query: 256 ARKWMKRAADCGH 268
AR W A GH
Sbjct: 353 ARTWFGLACKNGH 365
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLG 176
D L G A GLMY ++D ++A I Y +AA DP Q LG
Sbjct: 27 DSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAAAQNDPRAQVKLG 85
Query: 177 ISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+ Y V YQ AS+ V AQ+ L G GV + Q+A WY +AA
Sbjct: 86 LMYANGLGVNQDYQQAKSWYEKASVQNDVDAQFLLGEMYDDGLGVGQDYQQAKMWYEKAA 145
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
RA N ++ Y+ G G+ +RQA+ W ++AA AQ G+
Sbjct: 146 AQNDERAQVNLAVLYAKGNGVEQDYRQAKSWYEKAAAQNSSDAQFALGI 194
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 145 LMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGH 196
++Y + +++ +S + A GD Q+ LG+ YL E + + YQ A+
Sbjct: 18 IVYAAISDRDSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAAAQND 77
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
RAQ +L L G GV+ + Q+A WY +A+ V A + Y G G+ ++QA
Sbjct: 78 PRAQVKLGLMYANGLGVNQDYQQAKSWYEKASVQNDVDAQFLLGEMYDDGLGVGQDYQQA 137
Query: 257 RKWMKRAADCGHGKAQL 273
+ W ++AA +AQ+
Sbjct: 138 KMWYEKAAAQNDERAQV 154
>gi|149178612|ref|ZP_01857198.1| hypothetical protein PM8797T_07352 [Planctomyces maris DSM 8797]
gi|148842538|gb|EDL56915.1| hypothetical protein PM8797T_07352 [Planctomyces maris DSM 8797]
Length = 265
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 12/185 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
+AM G + +G GV ++ KA++ + K A +G+ + G MY +
Sbjct: 71 DAMEQSNLGVLYANGVGVEQDPFKAMEWYQKAAKQGNRVGQYHIGTMYLNGEGVKQDHNQ 130
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCL 207
AI +R++A G A QFN+G Y E VK Y +A+ + AQY L
Sbjct: 131 AIEWFRKSAEQGFDAAQFNIGAMYRDGEGVKQDYRQALEWFRKAAEQQNADAQYNLGFMY 190
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
++G GV +L+++ W+ ++AE G A YN + Y+ G+G+ + QA W ++AA G
Sbjct: 191 YKGEGVKQDLKQSLEWFRKSAEQGETDAQYNLGIMYANGKGVKQDYNQAVAWFRKAASQG 250
Query: 268 HGKAQ 272
H AQ
Sbjct: 251 HELAQ 255
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAG 171
+++ + + + LK A G + + G++Y E D +A + Y++AA G+ G
Sbjct: 52 LKQEMRQEFERCLKAAESGDAMEQSNLGVLYANGVGVEQDPFKA-MEWYQKAAKQGNRVG 110
Query: 172 QFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARW 223
Q+++G YL E VK + +I G AQ+ + G GV + ++A W
Sbjct: 111 QYHIGTMYLNGEGVKQDHNQAIEWFRKSAEQGFDAAQFNIGAMYRDGEGVKQDYRQALEW 170
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
+ +AAE A YN Y GEG+ +Q+ +W +++A+ G AQ G+ ++ G
Sbjct: 171 FRKAAEQQNADAQYNLGFMYYKGEGVKQDLKQSLEWFRKSAEQGETDAQYNLGI-MYANG 229
Query: 284 EMMK 287
+ +K
Sbjct: 230 KGVK 233
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 162 QAAVLGDPAGQFNLGISY-----LQEEAVKLL--YQ-ASIAGHVRAQYQLALCLHRGRGV 213
+AA GD Q NLG+ Y ++++ K + YQ A+ G+ QY + G GV
Sbjct: 65 KAAESGDAMEQSNLGVLYANGVGVEQDPFKAMEWYQKAAKQGNRVGQYHIGTMYLNGEGV 124
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +A W+ ++AE G+ A +N Y GEG+ +RQA +W ++AA+ + AQ
Sbjct: 125 KQDHNQAIEWFRKSAEQGFDAAQFNIGAMYRDGEGVKQDYRQALEWFRKAAEQQNADAQY 184
Query: 274 EHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
G ++ +GE +K ++ + + GET A + ++ +D V
Sbjct: 185 NLGF-MYYKGEGVKQDLKQSLEWFRKSAEQGETDAQYNLGIMYANGKGVKQDYNQAV 240
>gi|403388971|ref|ZP_10931028.1| hypothetical protein CJC12_14289 [Clostridium sp. JC122]
Length = 280
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLYR 161
G+ + +G GV K+ +KA++ F K A G A G +YW + D K++ Y
Sbjct: 2 GQLYANGLGVSKDYEKAVEYFHKAAELGYEEAYEMLGSIYWVGLDNIDRDYKKSRY-WYE 60
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA LG+P + NLG+ Y + E+A A+ G + AQ+ +A G+GV
Sbjct: 61 KAAALGNPKAKLNLGVIYSKGLSVKKDYEKAFNFYLSAAKDGKMEAQFNVACNFQDGKGV 120
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ N +EA +W+L+AAE G A Y LCY +G+G+ + A + + + G
Sbjct: 121 EKNDKEAVKWFLKAAESGDKDAKYELGLCYKYGKGVEKNLNMATNYFIDSFENG 174
>gi|325267702|ref|ZP_08134353.1| Sel1 repeat protein [Kingella denitrificans ATCC 33394]
gi|324980826|gb|EGC16487.1| Sel1 repeat protein [Kingella denitrificans ATCC 33394]
Length = 321
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 94/192 (48%), Gaps = 20/192 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---- 155
EA L W + +G+GVR++ +A+ + + A +G A GLMY D +
Sbjct: 56 EAQYNLGW--MYYNGQGVRQDYAEAVKWYRQAAEQGVAEAQFSLGLMY---DNGQGVRQD 110
Query: 156 ---AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
A YRQAA G Q+NLG+ Y EA+K QA G +A+ L
Sbjct: 111 YAEAFRWYRQAAEQGHAEAQYNLGVMYDNGDGVRQDYAEALKWYRQAVEQGVAQAKNNLG 170
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ +GRGV + EA RWY +AAE GY A +N Y+ G G+ + +A KW ++AA
Sbjct: 171 VMYAKGRGVRKDDAEALRWYRQAAEQGYAEAQFNLGAMYATGRGVRQDYTEAGKWFRQAA 230
Query: 265 DCGHGKAQLEHG 276
+ G+ AQ G
Sbjct: 231 EQGYAAAQYNLG 242
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G+GVR++ +A + + A +G A + G+MY D A+ YRQA
Sbjct: 98 GLMYDNGQGVRQDYAEAFRWYRQAAEQGHAEAQYNLGVMYDNGDGVRQDYAEALKWYRQA 157
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
G + NLG+ Y + EA++ QA+ G+ AQ+ L GRGV
Sbjct: 158 VEQGVAQAKNNLGVMYAKGRGVRKDDAEALRWYRQAAEQGYAEAQFNLGAMYATGRGVRQ 217
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA +W+ +AAE GY A YN Y+ G G+ + +A +W ++AA+ G+ AQ
Sbjct: 218 DYTEAGKWFRQAAEQGYAAAQYNLGAMYATGYGVSQNDAEAIRWYRQAAEQGYAAAQYNL 277
Query: 276 GLGLFT 281
G FT
Sbjct: 278 GAMYFT 283
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + +G GVR++ +AL + + +G A + G+MY + + K +A A+ YRQA
Sbjct: 134 GVMYDNGDGVRQDYAEALKWYRQAVEQGVAQAKNNLGVMYAKGRGVRKDDAEALRWYRQA 193
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G QFNLG Y EA K QA+ G+ AQY L G GV
Sbjct: 194 AEQGYAEAQFNLGAMYATGRGVRQDYTEAGKWFRQAAEQGYAAAQYNLGAMYATGYGVSQ 253
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N EA RWY +AAE GY A YN Y G G+ +++W +A D G
Sbjct: 254 NDAEAIRWYRQAAEQGYAAAQYNLGAMYFTGRGVRQDLHLSKEWFGKACDGG 305
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
Q A G+ Q+NLG Y EAVK QA+ G AQ+ L L G+GV
Sbjct: 48 QLAEQGNAEAQYNLGWMYYNGQGVRQDYAEAVKWYRQAAEQGVAEAQFSLGLMYDNGQGV 107
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ EA RWY +AAE G+ A YN + Y G+G+ + +A KW ++A + G AQ
Sbjct: 108 RQDYAEAFRWYRQAAEQGHAEAQYNLGVMYDNGDGVRQDYAEALKWYRQAVE--QGVAQA 165
Query: 274 EHGLGL 279
++ LG+
Sbjct: 166 KNNLGV 171
>gi|238022527|ref|ZP_04602953.1| hypothetical protein GCWU000324_02435 [Kingella oralis ATCC 51147]
gi|237867141|gb|EEP68183.1| hypothetical protein GCWU000324_02435 [Kingella oralis ATCC 51147]
Length = 363
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 24/251 (9%)
Query: 83 AASLVCKSWNDALR---PLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGS 136
AA+ ++ A R PL + A G ++ G+GV ++ +A+ + K A +G
Sbjct: 28 AAAYQAGNYKQAFRLWQPLAQQGDAEAQFNLGVMYEKGQGVAQDYQQAIAWYQKAANQGD 87
Query: 137 TLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQAS 192
A + G+MY + + AI+ Y++AA G QFNLG Y + V YQ +
Sbjct: 88 AEAQFNLGVMYEKGQGVAQDYQQAIAWYQKAANQGVAEAQFNLGGMYYNGQGVAQDYQQA 147
Query: 193 IAGHVR--------AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+ + + AQ+ L + +G+GV + Q A WY +AA G A YN S Y
Sbjct: 148 LVWYQKAANQEYAAAQFNLGVMYSKGQGVAQSYQRALAWYQKAAHQGLAAAQYNLSRMYE 207
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAG 299
G G+ ++QA W ++AA+ G+ AQ G+ ++ EG + +A+ + + A G
Sbjct: 208 DGRGVAQDYQQALAWYQKAANQGYSDAQFNLGV-MYDEGRGVAQDYQQALAWYQKAANQG 266
Query: 300 ETAADHVKNVI 310
+ A + V+
Sbjct: 267 DAMAQYNLGVM 277
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 13/188 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV ++ +A+ + K A +G A + G MY+ + A+ Y++A
Sbjct: 95 GVMYEKGQGVAQDYQQAIAWYQKAANQGVAEAQFNLGGMYYNGQGVAQDYQQALVWYQKA 154
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A A QFNLG+ Y + + V YQ ++A G AQY L+ GRGV
Sbjct: 155 ANQEYAAAQFNLGVMYSKGQGVAQSYQRALAWYQKAAHQGLAAAQYNLSRMYEDGRGVAQ 214
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ Q+A WY +AA GY A +N + Y G G+ ++QA W ++AA+ G AQ
Sbjct: 215 DYQQALAWYQKAANQGYSDAQFNLGVMYDEGRGVAQDYQQALAWYQKAANQGDAMAQYNL 274
Query: 276 GLGLFTEG 283
G+ ++ EG
Sbjct: 275 GV-MYYEG 281
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+GV ++ +AL + K A +G A + MY + + A++ Y++A
Sbjct: 167 GVMYSKGQGVAQSYQRALAWYQKAAHQGLAAAQYNLSRMYEDGRGVAQDYQQALAWYQKA 226
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G QFNLG+ Y + V YQ ++A G AQY L + + GRGV
Sbjct: 227 ANQGYSDAQFNLGVMYDEGRGVAQDYQQALAWYQKAANQGDAMAQYNLGVMYYEGRGVAQ 286
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
N Q+A WY +AA G A YN L Y+ G+G+ +QA+ W ++
Sbjct: 287 NYQQALSWYQKAANQGVAGAQYNLGLIYATGQGVAQDFQQAKAWWQK 333
>gi|291000098|ref|XP_002682616.1| hypothetical protein NAEGRDRAFT_37337 [Naegleria gruberi]
gi|284096244|gb|EFC49872.1| hypothetical protein NAEGRDRAFT_37337 [Naegleria gruberi]
Length = 292
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 15/187 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G G+ ++ KA + +LK A +G + A + LMY E D +A + ++A
Sbjct: 74 YDNGIGILQDYSKAFEWYLKSAKQGDSRAQFNLALMYENGKGVEQDYSKA-FEWFLKSAK 132
Query: 166 LGDPAGQFNL------GISYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD QFNL GI LQ+ +A + +++ G+ RAQ+ LAL G G+ +
Sbjct: 133 QGDSNAQFNLALMYENGIGILQDYSKAFEWYLKSAGQGYSRAQFNLALMYENGIGILQDY 192
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A WYL++AE GY A +N +L Y GEG+ + +A +W ++A+ G +AQ + +
Sbjct: 193 SKAFEWYLKSAEQGYSNAQFNLALMYENGEGILQDYSKAFEWYLKSAEQGDSRAQFKLAV 252
Query: 278 GLFTEGE 284
++ GE
Sbjct: 253 -MYYNGE 258
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+++G G+ ++ KA + FLK A +G + A + LMY + A Y ++A
Sbjct: 38 YENGEGIVQDYSKAFEWFLKSAEQGYSNAQFNLALMYDNGIGILQDYSKAFEWYLKSAKQ 97
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQ 218
GD QFNL + Y + V+ Y + G AQ+ LAL G G+ +
Sbjct: 98 GDSRAQFNLALMYENGKGVEQDYSKAFEWFLKSAKQGDSNAQFNLALMYENGIGILQDYS 157
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WYL++A GY RA +N +L Y G G+ + +A +W ++A+ G+ AQ L
Sbjct: 158 KAFEWYLKSAGQGYSRAQFNLALMYENGIGILQDYSKAFEWYLKSAEQGYSNAQFNLAL- 216
Query: 279 LFTEGE 284
++ GE
Sbjct: 217 MYENGE 222
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+++G+GV ++ KA + FLK A +G + A + LMY + A Y ++A
Sbjct: 110 YENGKGVEQDYSKAFEWFLKSAKQGDSNAQFNLALMYENGIGILQDYSKAFEWYLKSAGQ 169
Query: 167 GDPAGQFNL------GISYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G QFNL GI LQ+ +A + +++ G+ AQ+ LAL G G+ +
Sbjct: 170 GYSRAQFNLALMYENGIGILQDYSKAFEWYLKSAEQGYSNAQFNLALMYENGEGILQDYS 229
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+A WYL++AE G RA + ++ Y GEG+ + +A +W ++A+ G+ AQ
Sbjct: 230 KAFEWYLKSAEQGDSRAQFKLAVMYYNGEGILQDYSKAFEWFLKSAEQGNSSAQF 284
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 24/193 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA------- 163
+++G G+ ++ KA + FLK A +G + A + +MY + E + Y +A
Sbjct: 2 YENGEGILQDYSKAFEWFLKSAEQGDSNAQFNLAVMY---ENGEGIVQDYSKAFEWFLKS 58
Query: 164 AVLGDPAGQFNL------GISYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G QFNL GI LQ+ +A + +++ G RAQ+ LAL G+GV+
Sbjct: 59 AEQGYSNAQFNLALMYDNGIGILQDYSKAFEWYLKSAKQGDSRAQFNLALMYENGKGVEQ 118
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ +A W+L++A+ G A +N +L Y G G+ + +A +W ++A G+ +AQ
Sbjct: 119 DYSKAFEWFLKSAKQGDSNAQFNLALMYENGIGILQDYSKAFEWYLKSAGQGYSRAQFNL 178
Query: 274 ----EHGLGLFTE 282
E+G+G+ +
Sbjct: 179 ALMYENGIGILQD 191
>gi|375273604|gb|AFA43701.1| SEL1L [Danio rerio]
Length = 776
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 14/216 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G+T AM G MY E + E A+ +++AA LG+
Sbjct: 370 GRGVEQNHQRAYEYFNQAANAGNTHAMAFLGKMYSEGSEYVPQNNETALHYFKKAADLGN 429
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V + Y +A+ G V Q QL + G GV + ++A
Sbjct: 430 PVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGTMYYNGIGVKRDYKQA 489
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++ G++ A YN + ++ G G+ S A + K + G +L F
Sbjct: 490 LKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMAAYRSF 549
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLS 315
EG+M A++ YL LA + E A +V V+ Q+ S
Sbjct: 550 KEGDMDSALIQYLLLAEQGYEVAQSNVAFVLDQKGS 585
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 88/196 (44%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW E A++ YR
Sbjct: 245 GFLYAAGLGVNSSHAKALVYYTFGALGGNLVAHIILGYRYWGGVGVPQSCEPALTHYRLV 304
Query: 164 A--------VLGDPAGQ--------FNLGIS--YLQEEAVKLLYQASIAGHVRAQYQLA- 204
A + G A Q N G S L+E+ ++ + G V+AQ L
Sbjct: 305 ANHVASDVSLTGGSAVQRIRLLDEVENPGSSSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 364
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G E +P ++ A + K+A
Sbjct: 365 LHLHGGRGVEQNHQRAYEYFNQAANAGNTHAMAFLGKMYSEGSEYVPQNNETALHYFKKA 424
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 425 ADLGNPVGQ--SGLGM 438
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 47/124 (37%), Gaps = 24/124 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV N D AL F K A +G + G MY+
Sbjct: 437 GMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGTMYYN------------------ 478
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+G+ ++A+K AS AGH+ A Y LA G GV + A +
Sbjct: 479 ------GIGVKRDYKQALKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNV 532
Query: 228 AEGG 231
E G
Sbjct: 533 CERG 536
>gi|416155954|ref|ZP_11604247.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
101P30B1]
gi|416220293|ref|ZP_11625385.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
103P14B1]
gi|416249994|ref|ZP_11637003.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
CO72]
gi|326566881|gb|EGE17020.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
103P14B1]
gi|326575117|gb|EGE25045.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
CO72]
gi|326576797|gb|EGE26704.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
101P30B1]
Length = 302
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 13/186 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDP 169
G GVR++ KA + + K A +G A + LMY + D A + +AA G
Sbjct: 85 GLGVRQDYHKAFEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLA 144
Query: 170 AGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
QF+LG+ Y + + V+ Y +A+ G+ AQ+ LAL + G+GV + QEA
Sbjct: 145 EAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLALMYYEGQGVRQDDQEAV 204
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
WY +AA G+ A YN + Y G+G+ + +A +W +AA+ G +AQ G+ ++
Sbjct: 205 EWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYHKAVEWFTKAANQGFAQAQNNLGV-MYD 263
Query: 282 EGEMMK 287
EG+ ++
Sbjct: 264 EGQGVR 269
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G GVR++ KA + F K A +G A G+MY E A+ Y +AA
Sbjct: 118 YAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQ 177
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G QFNL + Y + +EAV+ +A+ GH AQY L + + G+GV +
Sbjct: 178 GYAGAQFNLALMYYEGQGVRQDDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYH 237
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+A W+ +AA G+ +A N + Y G+G+ + A+ + +A D G
Sbjct: 238 KAVEWFTKAANQGFAQAQNNLGVMYDEGQGVRQNIATAKIYYGQACDHG 286
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Query: 167 GDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
GD QF+L Y Q+ +A + +A+ G +AQY L + +G GV + +A
Sbjct: 38 GDAVAQFDLAREYYQQGNHAKAFEWFTKAAHQGDAQAQYNLGVMHAQGLGVRQDYHKAFE 97
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
WY +AA+ GY A +N +L Y+ G+G+ + +A +W +AA+ G +AQ G+ ++ E
Sbjct: 98 WYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGV-MYDE 156
Query: 283 GEMMKAVVY--LELATRA 298
G+ ++ Y +E T+A
Sbjct: 157 GQGVRQDYYKAVEWYTKA 174
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY-- 189
A G +A D Y++ A + +AA GD Q+NLG+ + Q V+ Y
Sbjct: 35 AQSGDAVAQFDLAREYYQQGNHAKAFEWFTKAAHQGDAQAQYNLGVMHAQGLGVRQDYHK 94
Query: 190 ------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
+A+ G+ AQ+ LAL +G GV + +A W+ +AA G A ++ + Y
Sbjct: 95 AFEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMY 154
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
G+G+ + +A +W +AA+ G+ AQ L ++ EG+ ++
Sbjct: 155 DEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLAL-MYYEGQGVR 197
>gi|299770689|ref|YP_003732715.1| hypothetical protein AOLE_12275 [Acinetobacter oleivorans DR1]
gi|375134255|ref|YP_004994905.1| hypothetical protein BDGL_000637 [Acinetobacter calcoaceticus
PHEA-2]
gi|298700777|gb|ADI91342.1| hypothetical protein AOLE_12275 [Acinetobacter oleivorans DR1]
gi|325121700|gb|ADY81223.1| hypothetical protein BDGL_000637 [Acinetobacter calcoaceticus
PHEA-2]
Length = 301
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 115/225 (51%), Gaps = 24/225 (10%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W 148
NDA EA+ +L + G G + + KAL+ F K A GS+ AM+ GL+Y
Sbjct: 52 NDA-----EAIFVL--ASMYATGEGEKFDQKKALELFEKSAQLGSSNAMLQLGLIYRNGN 104
Query: 149 EMDKKE--AAISLYRQAAVLGDPAGQFNLGISYL------QEEAVKLLY--QASIAGHVR 198
E+ KK+ A+ + + A G+P+ N+G++Y Q+ A Y +++ G ++
Sbjct: 105 EVVKKDDQKALIWFEEGAKKGNPSAIHNVGLAYYKGLNVKQDRAKAFTYFIRSAELGLIQ 164
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
+Q +A L+ G GV+ +++ + +W L+AAE G + + N L Y G+G+ Q+
Sbjct: 165 SQTVVAAQLYVGDGVEKDIKTSFKWLLKAAEQGDLESQNNVGLAYERGDGVEQDPLQSLV 224
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAG 299
W KRAAD GH AQ L + M + ++ Y E+A R G
Sbjct: 225 WFKRAADHGHALAQYNTALKYYNGAGMKQNLDESIRYAEMAVRNG 269
>gi|365844596|ref|ZP_09385432.1| Sel1 repeat protein [Flavonifractor plautii ATCC 29863]
gi|364564074|gb|EHM41849.1| Sel1 repeat protein [Flavonifractor plautii ATCC 29863]
Length = 1056
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 103/232 (44%), Gaps = 18/232 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G GV ++ A+ K AA+G+ A G + EMD A LY QAA
Sbjct: 709 YLNGNGVERDAAAAVRWLEKAAAQGNARAQSILGDLCRDGEGTEMDAARA-FQLYTQAAE 767
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G P Q LG Y + +AV+ +A+ GH AQ LA C +G GV +
Sbjct: 768 QGYPPAQCALGYCYEVGSGTAEDKTKAVEWYEKAAQRGHATAQCNLAYCYEQGIGVAEDK 827
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A WY RAAE + RAM N LCY +GEG+ +A +W ++AA G+ AQ G
Sbjct: 828 TKAVEWYARAAEQEHPRAMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGF 887
Query: 278 ----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
G+ + KAV + E A G A + D+A V
Sbjct: 888 FYDRGVGVAEDAAKAVEWYERAAEQGYPRAQCNLGYCYESGKGVKEDKARAV 939
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 16/234 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + GRGV ++ +KAL + + AA G A+ GL Y D K A+ Y +A
Sbjct: 418 GDFYLDGRGVEQDKEKALSLYRESAADGYLPAICSLGLCYETGDGVAEDKAQAVEWYTRA 477
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NL +L E+A+ L +A+ G RAQ L C G GV+
Sbjct: 478 AEGGYAPAQTNLAYCFLTGIGMEAAPEKAIPWLEKAAEQGQARAQSLLGGCYRDGDGVEA 537
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +AA WY +AA+ Y AM + L + GEGL +A W +AA G+ A
Sbjct: 538 DAAQAAEWYGKAAKQNYPPAMCSLGLAFELGEGLTEDPAKAVYWYTKAAGEGYAPAMTNL 597
Query: 276 GLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ L E +AV +LE A A + +L + D+A V
Sbjct: 598 AVCLLNGTGAERSAEEAVGWLEKAVEQEFPRAQGILGDLLLTGNGVPEDKARAV 651
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAIS 158
+ G +++G GV ++ KA + + K A RG A + G Y + A+
Sbjct: 845 AMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGFFYDRGVGVAEDAAKAVE 904
Query: 159 LYRQAAVLGDPAGQFNLGISY-----LQEE---AVKLLYQASIAGHVRAQYQLALCLHRG 210
Y +AA G P Q NLG Y ++E+ AVKL QA+ G Q L C+ +G
Sbjct: 905 WYERAAEQGYPRAQCNLGYCYESGKGVKEDKARAVKLYRQAAEQGSSVGQCNLGYCMLKG 964
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-HG 269
G+ + +A W+ +AAEGG RAM CY G+G+ QAR ++A D G
Sbjct: 965 IGIRPDPAQAVYWFRKAAEGGSGRAMCLLGDCYREGQGVEADAAQARTCYQKAIDLGFDA 1024
Query: 270 KAQLEH 275
K +LE
Sbjct: 1025 KEELEE 1030
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAAI 157
A L G +++ GV ++ +A + + K A + AM + + Y +++ A
Sbjct: 339 APALCDLGLCYENANGVAEDKVQAAECYRKAAEQDYAPAMCNLAVCYLNGIGVEEDMAQA 398
Query: 158 SLYRQAAVLGDPA------GQFNL---GISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
+ Q AV G A G F L G+ +E+A+ L +++ G++ A L LC
Sbjct: 399 VAWFQKAVEGGSARAKSILGDFYLDGRGVEQDKEKALSLYRESAADGYLPAICSLGLCYE 458
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GV + +A WY RAAEGGY A N + C+ G G+ + +A W+++AA+ G
Sbjct: 459 TGDGVAEDKAQAVEWYTRAAEGGYAPAQTNLAYCFLTGIGMEAAPEKAIPWLEKAAEQGQ 518
Query: 269 GKAQLEHGLGLFTEGEMMKA 288
+AQ G G + +G+ ++A
Sbjct: 519 ARAQSLLG-GCYRDGDGVEA 537
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAA- 156
+ G F+ G G+ ++ KA+ + K A G AM + + E +EA
Sbjct: 557 AMCSLGLAFELGEGLTEDPAKAVYWYTKAAGEGYAPAMTNLAVCLLNGTGAERSAEEAVG 616
Query: 157 -------ISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHR 209
R +LGD N G+ + AV+L A+ G+V A L LC
Sbjct: 617 WLEKAVEQEFPRAQGILGDLLLTGN-GVPEDKARAVELYRAAAKGGYVPAMCDLGLCYEN 675
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
G GV+ +L+ A WY ++AE GY N ++CY G G+ A +W+++AA G+
Sbjct: 676 GDGVEEDLRHAVLWYRKSAEEGYAPGQCNLAVCYLNGNGVERDAAAAVRWLEKAAAQGNA 735
Query: 270 KAQLEHG-LGLFTEGEMMKAVVYLELATRAGE 300
+AQ G L EG M A +L T+A E
Sbjct: 736 RAQSILGDLCRDGEGTEMDAARAFQLYTQAAE 767
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G G ++ KA++ + K A RG A + Y + + K A+ Y +A
Sbjct: 778 GYCYEVGSGTAEDKTKAVEWYEKAAQRGHATAQCNLAYCYEQGIGVAEDKTKAVEWYARA 837
Query: 164 AVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P NLG+ Y E V + +A+ G+ AQ L RG GV
Sbjct: 838 AEQEHPRAMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGFFYDRGVGVAE 897
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A WY RAAE GY RA N CY G+G+ +A K ++AA+ G Q
Sbjct: 898 DAAKAVEWYERAAEQGYPRAQCNLGYCYESGKGVKEDKARAVKLYRQAAEQGSSVGQCNL 957
Query: 276 GL----GLFTEGEMMKAVVYLELATRAG 299
G G+ + +AV + A G
Sbjct: 958 GYCMLKGIGIRPDPAQAVYWFRKAAEGG 985
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G+ ++ G GV K+ +A + F + A + A D GL Y ++K EA A Y QA
Sbjct: 94 GRCYQSGAGVEKDEARAAELFQQAAEQDYAPAQCDLGLSYENGSGVEKDEARAAECYLQA 153
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A Q NL + Y E A + L +A+ RA L C G GV+
Sbjct: 154 AEQDYAPAQTNLAVCYFNGIGVDKDVECAHQWLEKAAEQKFPRALNILGDCHWDGTGVEQ 213
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EAAR Y +AAE Y A+ N LCY G+G+ +A + ++AA+ + AQ
Sbjct: 214 DRGEAARLYRQAAEQDYPPALCNLGLCYEHGDGVEQDKAKAVECYRKAAEQDYAPAQCNL 273
Query: 276 GL----GLFTEGEMMKAVVYL 292
G+ G+ TE + A +
Sbjct: 274 GVLTLHGVGTEADPAAAAEWF 294
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AIS 158
L G ++HG GV ++ KA++ + K A + A + G++ EA A
Sbjct: 233 ALCNLGLCYEHGDGVEQDKAKAVECYRKAAEQDYAPAQCNLGVLTLHGVGTEADPAAAAE 292
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRG 210
+R+AA Q LG YL + V+ L QA+ G+ A L LC
Sbjct: 293 WFRRAAEQSFARAQDLLGDCYLDGKGVEADPARAAELYRQAADQGYAPALCDLGLCYENA 352
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GV + +AA Y +AAE Y AM N ++CY G G+ QA W ++A + G +
Sbjct: 353 NGVAEDKVQAAECYRKAAEQDYAPAMCNLAVCYLNGIGVEEDMAQAVAWFQKAVEGGSAR 412
Query: 271 AQ 272
A+
Sbjct: 413 AK 414
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+ +G GV K+++ A K A + A+ G +W E D+ EAA LYRQAA
Sbjct: 169 YFNGIGVDKDVECAHQWLEKAAEQKFPRALNILGDCHWDGTGVEQDRGEAA-RLYRQAAE 227
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
P NLG+ Y + +AV+ +A+ + AQ L + G G + +
Sbjct: 228 QDYPPALCNLGLCYEHGDGVEQDKAKAVECYRKAAEQDYAPAQCNLGVLTLHGVGTEADP 287
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
AA W+ RAAE + RA CY G+G+ +A + ++AAD G+ A + GL
Sbjct: 288 AAAAEWFRRAAEQSFARAQDLLGDCYLDGKGVEADPARAAELYRQAADQGYAPALCDLGL 347
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ +EE LL QA G Y L + G G D + +AARW+ A+E G +RA
Sbjct: 31 GLQRAREEFQTLLEQAE-GGDASVYYDLGVRYTEGDGTDKDPAQAARWFALASEDGDLRA 89
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
CY G G+ +A + ++AA+ + AQ + GL
Sbjct: 90 TDLLGRCYQSGAGVEKDEARAAELFQQAAEQDYAPAQCDLGL 131
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD + ++LG+ Y + +A + AS G +RA L C G GV+ +
Sbjct: 49 GDASVYYDLGVRYTEGDGTDKDPAQAARWFALASEDGDLRATDLLGRCYQSGAGVEKDEA 108
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
AA + +AAE Y A + L Y G G+ +A + +AA+ + AQ +
Sbjct: 109 RAAELFQQAAEQDYAPAQCDLGLSYENGSGVEKDEARAAECYLQAAEQDYAPAQTNLAVC 168
Query: 279 LFT 281
F
Sbjct: 169 YFN 171
>gi|261821024|ref|YP_003259130.1| Sel1 domain-containing protein repeat-containing protein
[Pectobacterium wasabiae WPP163]
gi|261605037|gb|ACX87523.1| Sel1 domain protein repeat-containing protein [Pectobacterium
wasabiae WPP163]
Length = 318
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 16/208 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + HG G+ ++ KAL+ ++K + +G A + G++Y++ + A Y +A
Sbjct: 104 GVLYSHGNGILQDHQKALEWYVKASEQGYAKAQFNLGMVYFDGLGVKQNYQKAFMWYTKA 163
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG+ Y + ++A +A+ G+ +AQ+ L + G+GV
Sbjct: 164 AEQGLAIAQTNLGLMYDKGIGAKKDNQKAFDWYMKAAQQGYDKAQFNLGMMYFDGQGVKQ 223
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ QEA WY +AAE G A +N + + G+G+ ++++A +W+ +A++ G +AQ
Sbjct: 224 DYQEAFMWYKKAAEQGLAIAQFNLGVLFINGQGVQQNYQKASEWLMKASEQGDARAQFNL 283
Query: 276 GL----GLFTEGEMMKAVVYLELATRAG 299
L GL E +M KA Y + G
Sbjct: 284 ALLYSNGLGVEKDMEKAKYYFVKSCNGG 311
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 93 DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD- 151
+ + ++ ++ W F V + DK L + A +G + V G++Y + +
Sbjct: 20 NNVSNMKNIILSFVWSISFSAMANVCEIKDKQL---CESAYKGIADSQVSLGVIYSKGNG 76
Query: 152 ---KKEAAISLYRQAAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQ 200
A Y +AA G+ QFNLG+ Y LQ+ +A++ +AS G+ +AQ
Sbjct: 77 VKQDYHKAFEWYMKAAKQGNMKAQFNLGVLYSHGNGILQDHQKALEWYVKASEQGYAKAQ 136
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ L + G GV N Q+A WY +AAE G A N L Y G G +++A W
Sbjct: 137 FNLGMVYFDGLGVKQNYQKAFMWYTKAAEQGLAIAQTNLGLMYDKGIGAKKDNQKAFDWY 196
Query: 261 KRAADCGHGKAQLEHGLGLFTEGEMMK 287
+AA G+ KAQ G+ ++ +G+ +K
Sbjct: 197 MKAAQQGYDKAQFNLGM-MYFDGQGVK 222
>gi|427400391|ref|ZP_18891629.1| hypothetical protein HMPREF9710_01225 [Massilia timonae CCUG 45783]
gi|425720665|gb|EKU83584.1| hypothetical protein HMPREF9710_01225 [Massilia timonae CCUG 45783]
Length = 527
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 20/187 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAV 165
+ G GV ++ +AL F + A +G A + G+M+ E K +EAA+ YR+AA
Sbjct: 116 YAKGHGVASDVGRALHWFSQAADQGEPGAQHNLGMMF-ETGKGVAQDQEAALRWYRRAAE 174
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G Q+NLG+ Y EA+ + +A+ GH AQ+ L L +G+ V+ +
Sbjct: 175 QGYVRSQYNLGLRYEAGQGVARDVREALAWMRKAAEQGHAPAQFNLGLRYDKGQDVEQDS 234
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----- 272
++A WY RA E G+ + +N +L Y G G+P A W +RAA+ GH AQ
Sbjct: 235 RQAILWYGRAGEQGHASSQFNLALIYDTGHGVPRDEALALTWYRRAAEQGHAGAQNSLGM 294
Query: 273 -LEHGLG 278
EHG G
Sbjct: 295 RHEHGQG 301
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 113/246 (45%), Gaps = 18/246 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G+GV K+ + A+ + AA G A + G+M+ E D +AA Y +
Sbjct: 41 GFMYVSGQGVPKSDELAVAWYRMAAAAGLAQAQYNLGVMFQKGQGVEQDFGQAA-HWYGR 99
Query: 163 AAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q+NLG Y + V QA+ G AQ+ L + G+GV
Sbjct: 100 AADQGYAPAQYNLGWLYAKGHGVASDVGRALHWFSQAADQGEPGAQHNLGMMFETGKGVA 159
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ + A RWY RAAE GYVR+ YN L Y G+G+ R+A WM++AA+ GH AQ
Sbjct: 160 QDQEAALRWYRRAAEQGYVRSQYNLGLRYEAGQGVARDVREALAWMRKAAEQGHAPAQFN 219
Query: 275 HGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
GL G E + +A+++ A G ++ +I RD A+ + R
Sbjct: 220 LGLRYDKGQDVEQDSRQAILWYGRAGEQGHASSQFNLALIYDTGHGVPRDEALALTWYRR 279
Query: 331 AMPSLH 336
A H
Sbjct: 280 AAEQGH 285
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R++ G+GV +++ +AL K A +G A + GL Y E D ++A I Y +
Sbjct: 185 GLRYEAGQGVARDVREALAWMRKAAEQGHAPAQFNLGLRYDKGQDVEQDSRQA-ILWYGR 243
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A G + QFNL + Y ++EA+ L + +A+ GH AQ L + G+GV
Sbjct: 244 AGEQGHASSQFNLALIYDTGHGVPRDEALALTWYRRAAEQGHAGAQNSLGMRHEHGQGVA 303
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +AA WY RAAE G A Y+ G G+ QA W +RAA+ GH +AQ +
Sbjct: 304 VDAAQAAAWYRRAAEQGLPAAQYHLGQLLDAGNGVEQDPAQATDWYRRAAEQGHLRAQFD 363
Query: 275 HGL 277
GL
Sbjct: 364 LGL 366
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ G GV ++ +A D + + A +G A D GL + E D +A ++ YR+
Sbjct: 329 GQLLDAGNGVEQDPAQATDWYRRAAEQGHLRAQFDLGLRFEAGNGVEQDSAQA-LAWYRR 387
Query: 163 AAVLGDPAGQFNLG--ISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
AA Q+ +G + ++ EA ++A+ H AQ++L L G+GV+ +
Sbjct: 388 AAGQDYAPAQYMVGALLDRIETGDPVEATDWFHKAADQKHALAQFELGLRYDCGKGVERD 447
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ A WYL AA G+ RA +N + Y+ G+G +A W+ R
Sbjct: 448 YEAAHFWYLCAARQGHARAQFNLGVMYAAGQGAQRDLVEAYAWLHR 493
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +AQ+ L G+GV + + A WY AA G +A YN + + G+G+
Sbjct: 32 GVAQAQHSLGFMYVSGQGVPKSDELAVAWYRMAAAAGLAQAQYNLGVMFQKGQGVEQDFG 91
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNV 309
QA W RAAD G+ AQ G L+ +G ++ +A+ + A GE A H +
Sbjct: 92 QAAHWYGRAADQGYAPAQYNLGW-LYAKGHGVASDVGRALHWFSQAADQGEPGAQHNLGM 150
Query: 310 ILQQLSATSRDR 321
+ + ++D+
Sbjct: 151 MFETGKGVAQDQ 162
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLA------MVDAGLMYWEMDKKEAAISLYR 161
G R +HG+GV + +A + + A +G A ++DAG E D +A YR
Sbjct: 293 GMRHEHGQGVAVDAAQAAAWYRRAAEQGLPAAQYHLGQLLDAGNGV-EQDPAQA-TDWYR 350
Query: 162 QAAVLGDPAGQFNLGISYL------QEEAVKLLYQASIAG--HVRAQYQLALCLHRGRGV 213
+AA G QF+LG+ + Q+ A L + AG + AQY + L R
Sbjct: 351 RAAEQGHLRAQFDLGLRFEAGNGVEQDSAQALAWYRRAAGQDYAPAQYMVGALLDRIETG 410
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
D EA W+ +AA+ + A + L Y G+G+ + A W AA GH +AQ
Sbjct: 411 D--PVEATDWFHKAADQKHALAQFELGLRYDCGKGVERDYEAAHFWYLCAARQGHARAQF 468
Query: 274 EHGLGLFTEGE 284
G+ ++ G+
Sbjct: 469 NLGV-MYAAGQ 478
>gi|373116045|ref|ZP_09530205.1| hypothetical protein HMPREF0995_01041 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371669736|gb|EHO34831.1| hypothetical protein HMPREF0995_01041 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 852
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G GV ++ A+ K AA+G+ A G + EMD A LY QAA
Sbjct: 505 YLNGNGVERDAAAAVRWLEKAAAQGNARAQSILGDLCRDGEGTEMDAARA-FQLYTQAAE 563
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G P Q LG Y + +AV+ +A+ GH AQ LA C +G GV +
Sbjct: 564 QGYPPAQCALGYCYEVGSGTAEDKTKAVEWYEKAAQRGHATAQCNLAYCYEQGIGVAEDK 623
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A WY RAAE + RAM N LCY +GEG+ +A +W ++AA G+ AQ G
Sbjct: 624 TKAVEWYARAAEQEHPRAMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGF 683
Query: 278 ----GLFTEGEMMKAVVYLELATRAG 299
G+ + KAV + E A G
Sbjct: 684 FYDRGVGVAEDAAKAVEWYERAAEQG 709
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 16/234 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + GRGV ++ +KAL + + AA G A+ GL Y D K A+ Y +A
Sbjct: 214 GDFYLDGRGVEQDKEKALSLYRESAADGYLPAICSLGLCYETGDGVAEDKAQAVEWYTRA 273
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NL +L E+A+ L +A+ G RAQ L C G GV+
Sbjct: 274 AEGGYAPAQTNLAYCFLTGIGMEAAPEKAIPWLEKAAEQGQARAQSLLGSCYRDGDGVEA 333
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +AA WY +AA+ Y AM + L + GEGL +A W +AA G+ A
Sbjct: 334 DAAQAAEWYGKAAKQNYPPAMCSLGLAFELGEGLTEDPAKAVYWYTKAAGEGYAPAMTNL 393
Query: 276 GLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ L E +AV +LE A A + +L + D+A V
Sbjct: 394 AVCLLNGTGAERSAEEAVGWLEKAAEQEFPRAQGILGDLLLTGNGAPEDKARAV 447
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAIS 158
+ G +++G GV ++ KA + + K A RG A + G Y + A+
Sbjct: 641 AMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGFFYDRGVGVAEDAAKAVE 700
Query: 159 LYRQAAVLGDPAGQFNLGISY-----LQEE---AVKLLYQASIAGHVRAQYQLALCLHRG 210
Y +AA G P Q NLG Y ++E+ AVKL QA+ G Q L C+ +G
Sbjct: 701 WYERAAEQGYPRAQCNLGYCYESGKGVKEDKTRAVKLYRQAAEQGSSVGQCNLGYCMLKG 760
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-HG 269
G+ + +A W+ +AAEGG RAM CY G+G+ QAR ++A D G
Sbjct: 761 IGIRPDPAQAVYWFRKAAEGGSGRAMCLLGDCYREGQGVEADAAQARTCYQKAIDLGFDA 820
Query: 270 KAQLEH 275
K +LE
Sbjct: 821 KEELEE 826
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 12/184 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAAI 157
A L G +++ GV ++ +A + + K A + AM + + Y +++ A
Sbjct: 135 APALCDLGLCYENANGVAEDKVQAAECYRKAAEQDYAPAMCNLAVCYLNGIGVEEDMAQA 194
Query: 158 SLYRQAAVLGDPA------GQFNL---GISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
+ Q AV G A G F L G+ +E+A+ L +++ G++ A L LC
Sbjct: 195 VAWFQKAVEGGSARAKSILGDFYLDGRGVEQDKEKALSLYRESAADGYLPAICSLGLCYE 254
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GV + +A WY RAAEGGY A N + C+ G G+ + +A W+++AA+ G
Sbjct: 255 TGDGVAEDKAQAVEWYTRAAEGGYAPAQTNLAYCFLTGIGMEAAPEKAIPWLEKAAEQGQ 314
Query: 269 GKAQ 272
+AQ
Sbjct: 315 ARAQ 318
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 101/234 (43%), Gaps = 16/234 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G F+ G G+ ++ KA+ + K A G AM + + E A+ +A
Sbjct: 358 GLAFELGEGLTEDPAKAVYWYTKAAGEGYAPAMTNLAVCLLNGTGAERSAEEAVGWLEKA 417
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P Q LG L + AV+L A+ G+V A L LC G GV+
Sbjct: 418 AEQEFPRAQGILGDLLLTGNGAPEDKARAVELYRAAAKGGYVPAMCDLGLCYENGDGVEE 477
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+L+ A WY ++AE GY N ++CY G G+ A +W+++AA G+ +AQ
Sbjct: 478 DLRHAVLWYRKSAEEGYAPGQCNLAVCYLNGNGVERDAAAAVRWLEKAAAQGNARAQSIL 537
Query: 276 G-LGLFTEGEMMKAVVYLELATRAGETA---ADHVKNVILQQLSATSRDRAMLV 325
G L EG M A +L T+A E A + S T+ D+ V
Sbjct: 538 GDLCRDGEGTEMDAARAFQLYTQAAEQGYPPAQCALGYCYEVGSGTAEDKTKAV 591
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G G ++ KA++ + K A RG A + Y + + K A+ Y +A
Sbjct: 574 GYCYEVGSGTAEDKTKAVEWYEKAAQRGHATAQCNLAYCYEQGIGVAEDKTKAVEWYARA 633
Query: 164 AVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P NLG+ Y E V + +A+ G+ AQ L RG GV
Sbjct: 634 AEQEHPRAMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGFFYDRGVGVAE 693
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A WY RAAE GY RA N CY G+G+ +A K ++AA+ G Q
Sbjct: 694 DAAKAVEWYERAAEQGYPRAQCNLGYCYESGKGVKEDKTRAVKLYRQAAEQGSSVGQCNL 753
Query: 276 GL----GLFTEGEMMKAVVYLELATRAG 299
G G+ + +AV + A G
Sbjct: 754 GYCMLKGIGIRPDPAQAVYWFRKAAEGG 781
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 13/192 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G + G G + +A + + A +G A G Y + K A+ Y +A
Sbjct: 538 GDLCRDGEGTEMDAARAFQLYTQAAEQGYPPAQCALGYCYEVGSGTAEDKTKAVEWYEKA 597
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NL Y Q +AV+ +A+ H RA L LC G GV
Sbjct: 598 AQRGHATAQCNLAYCYEQGIGVAEDKTKAVEWYARAAEQEHPRAMCNLGLCYEYGEGVAE 657
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +AA WY +AA GY A N Y G G+ +A +W +RAA+ G+ +AQ
Sbjct: 658 DKTKAAEWYEKAARRGYAPAQCNLGFFYDRGVGVAEDAAKAVEWYERAAEQGYPRAQCNL 717
Query: 276 GLGLFTEGEMMK 287
G + G+ +K
Sbjct: 718 GY-CYESGKGVK 728
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AIS 158
L G ++HG GV ++ KA++ + K A + A + G++ EA A
Sbjct: 29 ALCNLGLCYEHGDGVEQDKAKAVECYRKAAEQDYAPAQCNLGVLTLHGVGTEADPAAAAE 88
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRG 210
+R+AA Q LG YL + V+ L QA+ G+ A L LC
Sbjct: 89 WFRRAAEQSFARAQDLLGDCYLDGKGVEADPARAAELYRQAADQGYAPALCDLGLCYENA 148
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GV + +AA Y +AAE Y AM N ++CY G G+ QA W ++A + G +
Sbjct: 149 NGVAEDKVQAAECYRKAAEQDYAPAMCNLAVCYLNGIGVEEDMAQAVAWFQKAVEGGSAR 208
Query: 271 AQ 272
A+
Sbjct: 209 AK 210
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 92/241 (38%), Gaps = 52/241 (21%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGD 168
HG G + A + F + A + A G Y + EA A LYRQAA G
Sbjct: 75 HGVGTEADPAAAAEWFRRAAEQSFARAQDLLGDCYLDGKGVEADPARAAELYRQAADQGY 134
Query: 169 PAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
+LG+ Y +A + +A+ + A LA+C G GV+ ++ +A
Sbjct: 135 APALCDLGLCYENANGVAEDKVQAAECYRKAAEQDYAPAMCNLAVCYLNGIGVEEDMAQA 194
Query: 221 ARWYLRAAEG------------------------------------GYVRAMYNTSLCYS 244
W+ +A EG GY+ A+ + LCY
Sbjct: 195 VAWFQKAVEGGSARAKSILGDFYLDGRGVEQDKEKALSLYRESAADGYLPAICSLGLCYE 254
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGE 300
G+G+ QA +W RAA+ G+ AQ G+ E KA+ +LE A G+
Sbjct: 255 TGDGVAEDKAQAVEWYTRAAEGGYAPAQTNLAYCFLTGIGMEAAPEKAIPWLEKAAEQGQ 314
Query: 301 T 301
Sbjct: 315 A 315
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 148 WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRA 199
W EAA LYRQAA P NLG+ Y + +AV+ +A+ + A
Sbjct: 7 WRRGPGEAA-RLYRQAAEQDYPPALCNLGLCYEHGDGVEQDKAKAVECYRKAAEQDYAPA 65
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
Q L + G G + + AA W+ RAAE + RA CY G+G+ +A +
Sbjct: 66 QCNLGVLTLHGVGTEADPAAAAEWFRRAAEQSFARAQDLLGDCYLDGKGVEADPARAAEL 125
Query: 260 MKRAADCGHGKAQLEHGL 277
++AAD G+ A + GL
Sbjct: 126 YRQAADQGYAPALCDLGL 143
>gi|398850377|ref|ZP_10607083.1| TPR repeat-containing protein [Pseudomonas sp. GM80]
gi|398248914|gb|EJN34310.1| TPR repeat-containing protein [Pseudomonas sp. GM80]
Length = 443
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 22/247 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G + +G GV ++ KA+ + K A +G A G Y + E A++ Y +A
Sbjct: 197 GNSYHNGTGVDQDQQKAIFWYNKAADQGFAAAQNALGNSYANGEGVEKNAKQAVAWYYKA 256
Query: 164 AVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDF 215
AV + Q +LG Y Q+ +V + + +A+ G+ +AQY LA +G GVD
Sbjct: 257 AVQDNVYAQTSLGFCYDNGYGIAQDNSVAVYWYRKAAEEGYAQAQYNLAFNYAQGTGVDQ 316
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++AA WY +AAE G+ A N Y GEG+ + +QA W ++AA+ G AQL
Sbjct: 317 DFEQAAGWYRKAAEQGHAEAQNNLGASYERGEGVVQNIKQAVLWYRKAAEQGLATAQLNL 376
Query: 276 GLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLS----ATSRDRAMLVV 326
G+ L+ GE + +A ++ +A GE+ A ++ I +LS A +R A L
Sbjct: 377 GI-LYYNGEGVMEDKSQAYTWIAVAAANGESKAIKPRSEIADELSMSELAAARKLAELYY 435
Query: 327 DSWRAMP 333
+ ++ +
Sbjct: 436 EKYQPIA 442
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDK-KEA 155
+A G+ F +G G+ KN +A+ + A + A G Y +D+ ++
Sbjct: 153 DAYAQFSLGEHFDNGMGLVKNQQQAVALYHMAAGKDLAAAQNSLGNSYHNGTGVDQDQQK 212
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCL 207
AI Y +AA G A Q LG SY E AV Y+A++ +V AQ L C
Sbjct: 213 AIFWYNKAADQGFAAAQNALGNSYANGEGVEKNAKQAVAWYYKAAVQDNVYAQTSLGFCY 272
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G+ + A WY +AAE GY +A YN + Y+ G G+ QA W ++AA+ G
Sbjct: 273 DNGYGIAQDNSVAVYWYRKAAEEGYAQAQYNLAFNYAQGTGVDQDFEQAAGWYRKAAEQG 332
Query: 268 HGKAQ 272
H +AQ
Sbjct: 333 HAEAQ 337
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+ A GDP+ Q +LG Y ++AV Y+A+I G +AQ L L G G
Sbjct: 38 RKLADEGDPSAQNHLGDIYADGLGVAEDAKQAVAWYYKAAIQGFAQAQSNLGYHLENGIG 97
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
++ N ++AA WY ++A G + + Y G G+ +A W +AA+ G AQ
Sbjct: 98 IEQNAEQAAGWYYKSAVQGLATGQMHLAYLYDQGVGVEKDVNKALTWYYKAAEQGDAYAQ 157
Query: 273 ------LEHGLGLFTEGEMMKAVVYL 292
++G+GL + A+ ++
Sbjct: 158 FSLGEHFDNGMGLVKNQQQAVALYHM 183
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-----MYWEMDKKEAAISLYRQ 162
G + G GV ++ +A+ + K A +G A + G + E + ++AA Y +
Sbjct: 53 GDIYADGLGVAEDAKQAVAWYYKAAIQGFAQAQSNLGYHLENGIGIEQNAEQAA-GWYYK 111
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+AV G GQ +L Y Q +A+ Y+A+ G AQ+ L G G+
Sbjct: 112 SAVQGLATGQMHLAYLYDQGVGVEKDVNKALTWYYKAAEQGDAYAQFSLGEHFDNGMGLV 171
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N Q+A Y AA A + Y G G+ ++A W +AAD G AQ
Sbjct: 172 KNQQQAVALYHMAAGKDLAAAQNSLGNSYHNGTGVDQDQQKAIFWYNKAADQGFAAAQ 229
>gi|340622035|ref|YP_004740487.1| hypothetical protein Ccan_12640 [Capnocytophaga canimorsus Cc5]
gi|339902301|gb|AEK23380.1| Uncharacterized protein ybeQ [Capnocytophaga canimorsus Cc5]
Length = 760
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 20/201 (9%)
Query: 87 VCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K +N+A++ ++A G+ + +G GV K+ D+A+ F K A +G+ +
Sbjct: 547 VSKDYNEAVKWYKKATEQGDASGQSNLGEMYYYGYGVPKDYDEAVKWFRKAAEQGNAVGQ 606
Query: 141 VDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKL 187
+ G+MY D EA + +R+AA G+ +GQ NLG+ Y EAVK
Sbjct: 607 NNLGVMYRNGFGVSKDYNEA-VKWFRKAAEQGNASGQNNLGLMYRNGLGVSKDYNEAVKW 665
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+A+ G+ Q L + G+GV + EA +WY +AAE G N Y +G
Sbjct: 666 YRKAAEQGYALGQNNLGTMYYNGQGVSKDYNEAVKWYRKAAEQGNAFGQNNLGDMYYYGY 725
Query: 248 GLPLSHRQARKWMKRAADCGH 268
G+P +A KW +++A G+
Sbjct: 726 GVPKDKAEAVKWYQKSARQGN 746
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ + +G GV K+ ++A+ + K +G + G MY+ D EA + +R+
Sbjct: 538 GEMYYYGYGVSKDYNEAVKWYKKATEQGDASGQSNLGEMYYYGYGVPKDYDEA-VKWFRK 596
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ GQ NLG+ Y EAVK +A+ G+ Q L L G GV
Sbjct: 597 AAEQGNAVGQNNLGVMYRNGFGVSKDYNEAVKWFRKAAEQGNASGQNNLGLMYRNGLGVS 656
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ EA +WY +AAE GY N Y G+G+ + +A KW ++AA+ G+ Q
Sbjct: 657 KDYNEAVKWYRKAAEQGYALGQNNLGTMYYNGQGVSKDYNEAVKWYRKAAEQGNAFGQ 714
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 18/230 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + G G+ K+ ++A + + K A +G+T + G MY D EA + YR+
Sbjct: 394 GQAYYSGIGISKDYEQAANWYRKSAEQGNTSGQNNLGWMYQNGFGVSKDYYEA-VKWYRK 452
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ +GQ NLG Y +EAVK +A+ G+ Q L G GV
Sbjct: 453 AAEQGNTSGQNNLGEMYYYGYGVPKDYDEAVKWFRKAAEQGNASGQNNLGNMYRNGFGVS 512
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA WY +AAE G N Y +G G+ + +A KW K+A + G Q
Sbjct: 513 KDYYEAVEWYRKAAEQGKASGQSNLGEMYYYGYGVSKDYNEAVKWYKKATEQGDASGQSN 572
Query: 275 HG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G G + +AV + A G + V+ + S+D
Sbjct: 573 LGEMYYYGYGVPKDYDEAVKWFRKAAEQGNAVGQNNLGVMYRNGFGVSKD 622
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGI 177
+KA + FL+ A +G + A D G Y+ E A + YR++A G+ +GQ NLG
Sbjct: 372 EKAFELFLESANKGHSGAQYDLGQAYYSGIGISKDYEQAANWYRKSAEQGNTSGQNNLGW 431
Query: 178 SYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y EAVK +A+ G+ Q L + G GV + EA +W+ +AAE
Sbjct: 432 MYQNGFGVSKDYYEAVKWYRKAAEQGNTSGQNNLGEMYYYGYGVPKDYDEAVKWFRKAAE 491
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEM 285
G N Y G G+ + +A +W ++AA+ G Q G G +
Sbjct: 492 QGNASGQNNLGNMYRNGFGVSKDYYEAVEWYRKAAEQGKASGQSNLGEMYYYGYGVSKDY 551
Query: 286 MKAVVYLELATRAGETAA 303
+AV + + AT G+ +
Sbjct: 552 NEAVKWYKKATEQGDASG 569
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQ 190
A+ + +++ ++ E A L+ ++A G Q++LG +Y E+A +
Sbjct: 357 ALYEQAVLHSHKNEHEKAFELFLESANKGHSGAQYDLGQAYYSGIGISKDYEQAANWYRK 416
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
++ G+ Q L G GV + EA +WY +AAE G N Y +G G+P
Sbjct: 417 SAEQGNTSGQNNLGWMYQNGFGVSKDYYEAVKWYRKAAEQGNTSGQNNLGEMYYYGYGVP 476
Query: 251 LSHRQARKWMKRAADCGHGKAQ 272
+ +A KW ++AA+ G+ Q
Sbjct: 477 KDYDEAVKWFRKAAEQGNASGQ 498
>gi|290977798|ref|XP_002671624.1| predicted protein [Naegleria gruberi]
gi|284085194|gb|EFC38880.1| predicted protein [Naegleria gruberi]
Length = 565
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G GV K+ +KA + F KGA +G ++ G Y E D K+A + Y +
Sbjct: 62 GCKYMDGSGVEKDSEKAFEWFSKGAEQGCLESIHKVGYFYHHGLGVEQDYKKA-MEWYLK 120
Query: 163 AAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA Q N+G+ Y E V + +A+ G+ AQ+ + +G GV+
Sbjct: 121 AADRNLAKSQNNIGVLYRSGEGVAKDLSKSMEWYLKAAENGNEIAQFNIGASYDKGVGVE 180
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL- 273
+ ++ WYL++A+ GY +A +N + Y + EG+ +A +W RAA GH AQ
Sbjct: 181 QDKPKSFEWYLKSAKNGYAKAQFNVACAYDYAEGVEKDLSKAVEWYLRAAKNGHADAQFN 240
Query: 274 -----EHGLGLFTEGEMMKAVVYLELATRAGET 301
E+G G+ E + KA+ + A+ G T
Sbjct: 241 VGWSYENGEGI--EKDYAKAMTWYLTASENGNT 271
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++ G GV K+L K+++ +LK A G+ +A + G Y E DK ++ Y +
Sbjct: 134 GVLYRSGEGVAKDLSKSMEWYLKAAENGNEIAQFNIGASYDKGVGVEQDKPKS-FEWYLK 192
Query: 163 AAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G QFN+ +Y E AV+ +A+ GH AQ+ + G G++
Sbjct: 193 SAKNGYAKAQFNVACAYDYAEGVEKDLSKAVEWYLRAAKNGHADAQFNVGWSYENGEGIE 252
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ +A WYL A+E G + N Y G G+ + +A +W + A+
Sbjct: 253 KDYAKAMTWYLTASENGNTDSYTNIGFLYRNGRGVEKNLEKAFEWYMKGAE 303
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 12/175 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + G GV ++ K+ + +LK A G A + Y + E A+ Y +A
Sbjct: 170 GASYDKGVGVEQDKPKSFEWYLKSAKNGYAKAQFNVACAYDYAEGVEKDLSKAVEWYLRA 229
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G QFN+G SY E ++ Y AS G+ + + GRGV+
Sbjct: 230 AKNGHADAQFNVGWSYENGEGIEKDYAKAMTWYLTASENGNTDSYTNIGFLYRNGRGVEK 289
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
NL++A WY++ AE ++ N + YS G G+ ++A W ++ + + K
Sbjct: 290 NLEKAFEWYMKGAEKDVKQSQNNVANAYSNGYGVEKDLKKALFWRLKSVNTNNFK 344
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Y L G GV+ + ++A W+ + AE G + +++ Y G G+ +++A
Sbjct: 55 TESYYTLGCKYMDGSGVEKDSEKAFEWFSKGAEQGCLESIHKVGYFYHHGLGVEQDYKKA 114
Query: 257 RKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+W +AAD K+Q G+ L+ GE
Sbjct: 115 MEWYLKAADRNLAKSQNNIGV-LYRSGE 141
>gi|410916375|ref|XP_003971662.1| PREDICTED: protein sel-1 homolog 1-like [Takifugu rubripes]
Length = 787
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAVLGD 168
GRGV +N +A D F + A G+T AM G MY + + E A+ +++A+ LG+
Sbjct: 351 GRGVEQNHQRAFDYFTQAANAGNTHAMAFLGKMYSDGSEFLPQNNETALKYFKKASELGN 410
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 411 PVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGLVDGQLQLGTMYYNGIGVKRDYKQA 470
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++ G+V A Y + ++ G G+ S A + K + G +L G F
Sbjct: 471 LKFFNLASQAGHVLAFYYLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYGSF 530
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 313
EGE A+V YL LA + E A +V ++ Q+
Sbjct: 531 REGETDAALVQYLLLAEQGYEVAQSNVAFILDQK 564
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 86/196 (43%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYR-- 161
G + G GV + KAL + GA G+ +A + G YW E+A++ YR
Sbjct: 226 GFLYAAGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWGGVGVPQSCESALTHYRLV 285
Query: 162 ----------------QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
Q L D A L+E+ ++ + G V+AQ L
Sbjct: 286 ANQVASEVTLTGGTAVQKIRLLDEAENPGSTSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 345
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G E LP ++ A K+ K+A
Sbjct: 346 LHLHGGRGVEQNHQRAFDYFTQAANAGNTHAMAFLGKMYSDGSEFLPQNNETALKYFKKA 405
Query: 264 ADCGHGKAQLEHGLGL 279
++ G+ Q GLG+
Sbjct: 406 SELGNPVGQ--SGLGM 419
>gi|113680603|ref|NP_001038629.1| protein sel-1 homolog 1 precursor [Danio rerio]
Length = 776
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 14/216 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G+T AM G MY E + E A+ +++AA LG+
Sbjct: 370 GRGVEQNHQRAYEYFNQAANAGNTHAMAFLGKMYSEGSEYVPQNNETALHYFKKAADLGN 429
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V + Y +A+ G V Q QL + G GV + ++A
Sbjct: 430 PVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGTMYYNGIGVKRDYKQA 489
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++ G++ A YN + ++ G G+ S A + K + G +L F
Sbjct: 490 LKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMAAYRSF 549
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLS 315
EG+M A++ YL LA + E A +V V+ Q+ S
Sbjct: 550 KEGDMDSALIQYLLLAEQGYEVAQSNVAFVLDQKGS 585
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 89/196 (45%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW E+A++ YR
Sbjct: 245 GFLYAAGLGVNSSQAKALVYYTFGALGGNLVAHMILGYRYWGGVGVPQSCESALTHYRLV 304
Query: 164 A--------VLGDPAGQ--------FNLGIS--YLQEEAVKLLYQASIAGHVRAQYQLA- 204
A + G A Q N G S L+E+ ++ + G V+AQ L
Sbjct: 305 ANHVASDVSLTGGSAVQRIRLLDEVENPGSSSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 364
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G E +P ++ A + K+A
Sbjct: 365 LHLHGGRGVEQNHQRAYEYFNQAANAGNTHAMAFLGKMYSEGSEYVPQNNETALHYFKKA 424
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 425 ADLGNPVGQ--SGLGM 438
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 47/124 (37%), Gaps = 24/124 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV N D AL F K A +G + G MY+
Sbjct: 437 GMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGTMYYN------------------ 478
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+G+ ++A+K AS AGH+ A Y LA G GV + A +
Sbjct: 479 ------GIGVKRDYKQALKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNV 532
Query: 228 AEGG 231
E G
Sbjct: 533 CERG 536
>gi|197117496|ref|YP_002137923.1| SEL1 repeat-containing lipoprotein [Geobacter bemidjiensis Bem]
gi|197086856|gb|ACH38127.1| SEL1 repeat-containing protein [Geobacter bemidjiensis Bem]
Length = 270
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 13/214 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV +N+ +AL F + A GS A + G +Y MD EA + Y +
Sbjct: 56 GVLYYNGLGVGRNVSEALHWFRRAADLGSAEAQANLGQLYETGDGVTMDLAEA-MKWYGK 114
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
AA GDP Q + + E ++ + + ++ GHV AQY LA + G V + +EA
Sbjct: 115 AAAGGDPDAQHDFDRLRAESEPRRIRWYRRDALLGHVTAQYNLADAYYHGEEVPQDKREA 174
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG---- 276
A+WYL+AAE G V A Y L G+G+ + + W+++AA GH +AQ + G
Sbjct: 175 AKWYLKAAEQGNVPAQYMLGLMLLQGDGVQNASAEGVAWLRKAASSGHREAQYQMGRCLL 234
Query: 277 LGLFTEGEMMKAVVYLELATRAGE-TAADHVKNV 309
G+ + +AV++L A GE TA +K V
Sbjct: 235 QGIGVRRDSEEAVLWLRKAAAQGEPTAVAALKEV 268
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 202 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261
+L + + G GV N+ EA W+ RAA+ G A N Y G+G+ + +A KW
Sbjct: 54 KLGVLYYNGLGVGRNVSEALHWFRRAADLGSAEAQANLGQLYETGDGVTMDLAEAMKWYG 113
Query: 262 RAADCGHGKAQ 272
+AA G AQ
Sbjct: 114 KAAAGGDPDAQ 124
>gi|340363637|ref|ZP_08685960.1| Sel1 repeat superfamily protein [Neisseria macacae ATCC 33926]
gi|339885316|gb|EGQ75045.1| Sel1 repeat superfamily protein [Neisseria macacae ATCC 33926]
Length = 267
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 15/187 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ GRGVR++ KA+ + K A +G A + G+ Y E D +A + YR+ A
Sbjct: 51 YDSGRGVRQDYTKAVQWYRKAAEQGVAEAQFNLGVAYAEGKGVRQDYAQA-VQWYRKVAE 109
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
G Q NLG+ Y + + V+ + +A+ GH AQY L + +G GV +
Sbjct: 110 QGYSEAQLNLGMMYDKGQGVRQDHAQAAQWYRKAAEQGHAVAQYNLGVAYKKGEGVRQDD 169
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A +WY +AAE G +A N + Y G+G+ + +A W ++AA+ G +AQ G+
Sbjct: 170 KQAVQWYRKAAEQGLAQAQSNLGVMYGKGQGVRQDYAKAVSWYRKAAEQGQAEAQYNLGV 229
Query: 278 GLFTEGE 284
++ EG+
Sbjct: 230 -MYEEGQ 235
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 18/175 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + G+GVR++ +A+ + K A +G + A ++ G+MY DK + A Y
Sbjct: 84 GVAYAEGKGVRQDYAQAVQWYRKVAEQGYSEAQLNLGMMY---DKGQGVRQDHAQAAQWY 140
Query: 161 RQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA G Q+NLG++Y + E AV+ +A+ G +AQ L + +G+G
Sbjct: 141 RKAAEQGHAVAQYNLGVAYKKGEGVRQDDKQAVQWYRKAAEQGLAQAQSNLGVMYGKGQG 200
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
V + +A WY +AAE G A YN + Y G+G+ + + A++W K+A D G
Sbjct: 201 VRQDYAKAVSWYRKAAEQGQAEAQYNLGVMYEEGQGVSKNRKVAKEWYKKACDNG 255
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGV 213
Q+A G+ QFNLG+ Y V+ Y +A+ G AQ+ L + G+GV
Sbjct: 34 QSAKQGNADAQFNLGLMYDSGRGVRQDYTKAVQWYRKAAEQGVAEAQFNLGVAYAEGKGV 93
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +A +WY + AE GY A N + Y G+G+ H QA +W ++AA+ GH AQ
Sbjct: 94 RQDYAQAVQWYRKVAEQGYSEAQLNLGMMYDKGQGVRQDHAQAAQWYRKAAEQGHAVAQY 153
Query: 274 EHGLGLFTEGE 284
G+ + +GE
Sbjct: 154 NLGVA-YKKGE 163
>gi|261364815|ref|ZP_05977698.1| Sel1 repeat protein [Neisseria mucosa ATCC 25996]
gi|288566849|gb|EFC88409.1| Sel1 repeat protein [Neisseria mucosa ATCC 25996]
Length = 263
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G ++ GRGVR++ +A+ + K A +G A + G MY++ + A+ YR+A
Sbjct: 84 GVAYERGRGVRQDDAQAVQWYRKAAEQGYATAQFNLGWMYYKGEGVRQDYAQAVQWYRKA 143
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG+ Y + E+AV+ +A+ GH +AQ L G GV
Sbjct: 144 AEQGVAEAQSNLGVMYERGRGVRQDDEQAVQWYRKAAEQGHAQAQDNLGEAYEEGLGVHQ 203
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ +A +WY +AAE G A YN + Y G G+ QA +W + AA+ GH
Sbjct: 204 DDAQAVQWYRKAAEQGLANAQYNLGVMYERGRGVRQDDEQAVQWYREAAEQGH 256
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 29/226 (12%)
Query: 81 LRAASLVCKSWNDALRPLRE-----------AMVLLRWGKRFKHGRGVRKNLDKALDSFL 129
L A L +W D + RE A LL G + +G+GVR++ +A+ +
Sbjct: 12 LIALGLKQAAWADDVPDFRENLQAAERGDAHAQALL--GNMYANGQGVRQDDAEAVRWYR 69
Query: 130 KGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEA 184
+ AA+G A + G+ Y D + A+ YR+AA G QFNLG Y + E
Sbjct: 70 QAAAQGFAEAQYNLGVAYERGRGVRQDDAQ-AVQWYRKAAEQGYATAQFNLGWMYYKGEG 128
Query: 185 VKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
V+ Y +A+ G AQ L + RGRGV + ++A +WY +AAE G+ +A
Sbjct: 129 VRQDYAQAVQWYRKAAEQGVAEAQSNLGVMYERGRGVRQDDEQAVQWYRKAAEQGHAQAQ 188
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
N Y G G+ QA +W ++AA+ G AQ + LG+ E
Sbjct: 189 DNLGEAYEEGLGVHQDDAQAVQWYRKAAEQGLANAQ--YNLGVMYE 232
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 129 LKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-- 181
L+ A RG A G MY D EA + YRQAA G Q+NLG++Y +
Sbjct: 33 LQAAERGDAHAQALLGNMYANGQGVRQDDAEA-VRWYRQAAAQGFAEAQYNLGVAYERGR 91
Query: 182 ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
+AV+ +A+ G+ AQ+ L ++G GV + +A +WY +AAE G A
Sbjct: 92 GVRQDDAQAVQWYRKAAEQGYATAQFNLGWMYYKGEGVRQDYAQAVQWYRKAAEQGVAEA 151
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAV 289
N + Y G G+ QA +W ++AA+ GH +AQ E GLG+ + +AV
Sbjct: 152 QSNLGVMYERGRGVRQDDEQAVQWYRKAAEQGHAQAQDNLGEAYEEGLGVHQDD--AQAV 209
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ A G A + V+ ++ +D V
Sbjct: 210 QWYRKAAEQGLANAQYNLGVMYERGRGVRQDDEQAV 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GVR++ +A+ + K A +G A + G+MY E A+ YR+A
Sbjct: 120 GWMYYKGEGVRQDYAQAVQWYRKAAEQGVAEAQSNLGVMYERGRGVRQDDEQAVQWYRKA 179
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG +Y + +AV+ +A+ G AQY L + RGRGV
Sbjct: 180 AEQGHAQAQDNLGEAYEEGLGVHQDDAQAVQWYRKAAEQGLANAQYNLGVMYERGRGVRQ 239
Query: 216 NLQEAARWYLRAAEGGYVRAMY 237
+ ++A +WY AAE G++ A++
Sbjct: 240 DDEQAVQWYREAAEQGHLWALF 261
>gi|237748455|ref|ZP_04578935.1| Sel1 domain-containing protein [Oxalobacter formigenes OXCC13]
gi|229379817|gb|EEO29908.1| Sel1 domain-containing protein [Oxalobacter formigenes OXCC13]
Length = 399
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 132 AARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK 186
A R + + + + G+ Y E D+K+A S +RQAA +G P Q+NLG +Y + ++
Sbjct: 40 AKRETAIKLYNLGVEYAKGSRVEKDRKKAN-SYFRQAAEIGLPEAQYNLGRAYFDGDGLE 98
Query: 187 LLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+ +A+I G +AQY L + G G+ + A +WY RAA G+V A YN
Sbjct: 99 VDRKAAIEWYKKAAEQGFAQAQYNLGVIYQNGLGIKQDFDSAVQWYERAANQGFVLAQYN 158
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG 283
+ Y G G+ + ++ W+++AA+ G+G+AQ H LG ++ EG
Sbjct: 159 LGMLYITGAGVGKNPKRGILWLRKAAEGGYGQAQ--HNLGTVYYEG 202
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 94/199 (47%), Gaps = 13/199 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A+ L G + G V K+ KA F + A G A + G Y++ D ++AA
Sbjct: 45 AIKLYNLGVEYAKGSRVEKDRKKANSYFRQAAEIGLPEAQYNLGRAYFDGDGLEVDRKAA 104
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLH 208
I Y++AA G Q+NLG+ Y + AV+ +A+ G V AQY L +
Sbjct: 105 IEWYKKAAEQGFAQAQYNLGVIYQNGLGIKQDFDSAVQWYERAANQGFVLAQYNLGMLYI 164
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GV N + W +AAEGGY +A +N Y G G+ ++ +A +W +AA
Sbjct: 165 TGAGVGKNPKRGILWLRKAAEGGYGQAQHNLGTVYYEGIGVRKNYPEAVQWFAKAAKQEL 224
Query: 269 GKAQLEHGLGLFTEGEMMK 287
G AQ G+ + GE +K
Sbjct: 225 GMAQYNLGMAYY-HGEGVK 242
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 55/239 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G +++G G++++ D A+ + + A +G LA + G++Y + I R+A
Sbjct: 124 GVIYQNGLGIKQDFDSAVQWYERAANQGFVLAQYNLGMLYITGAGVGKNPKRGILWLRKA 183
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG Y + EAV+ +A+ AQY L + + G GV
Sbjct: 184 AEGGYGQAQHNLGTVYYEGIGVRKNYPEAVQWFAKAAKQELGMAQYNLGMAYYHGEGVKK 243
Query: 216 NLQEAARWYLRAAEG---------GYV---------------------------RAMYNT 239
N Q+A W +AA+ GY+ RA
Sbjct: 244 NPQKAVSWLKKAAKQNLLIAQASLGYIYVTDRNFKNNLAEGIFWTKKASAYGNARAQATL 303
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYL 292
+ Y G+G+ + + W+K+AA G+ AQ E+G+G+ + +++ +YL
Sbjct: 304 GIAYLIGKGVEKNIPEGVSWIKKAARQGNYPAQSMLASCYENGIGV-KQNKVLAYALYL 361
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE------ 154
M G + HG GV+KN KA+ S+LK AA+ L + A L Y + +
Sbjct: 225 GMAQYNLGMAYYHGEGVKKNPQKAV-SWLKKAAK-QNLLIAQASLGYIYVTDRNFKNNLA 282
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALC 206
I ++A+ G+ Q LGI+YL E V + +A+ G+ AQ LA C
Sbjct: 283 EGIFWTKKASAYGNARAQATLGIAYLIGKGVEKNIPEGVSWIKKAARQGNYPAQSMLASC 342
Query: 207 LHRGRGVDFNLQEAARWYLRAA 228
G GV N A YL ++
Sbjct: 343 YENGIGVKQNKVLAYALYLHSS 364
>gi|254472523|ref|ZP_05085923.1| Sel1 domain protein repeat-containing protein [Pseudovibrio sp.
JE062]
gi|211958806|gb|EEA94006.1| Sel1 domain protein repeat-containing protein [Pseudovibrio sp.
JE062]
Length = 601
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 18/232 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G+ ++ G GV ++ ++AL +++ A +G A + +MY D EAA + Y
Sbjct: 337 GRIYEIGLGVDQDYNEALKWYIRAAEQGVVDAQYNLAVMYANGTGISQDLAEAA-AWYHF 395
Query: 163 AAVLGDPAGQFNLGISYL------QEEAV--KLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G P Q+NLG Y Q+EA + + A+ GH AQY++ G GV+
Sbjct: 396 AAKQGHPDAQYNLGFLYATGQGVEQDEATAARWVRLAANQGHAEAQYRIGRAYEDGVGVE 455
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N EAA WY AA + +A + Y+ G G+P +A KW+ AA+ G+ +AQ
Sbjct: 456 QNHTEAANWYYLAATQNHAKAQFALGRVYAIGLGVPQDEVEAAKWVLHAAERGYLEAQYR 515
Query: 275 HGLGLF----TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
GL + + + +A ++ +A G A V+ L+A ++A
Sbjct: 516 IGLAFYKGSGVKQNIERAYIWFYIAAENGSKPALKVQKEAADHLNANEIEQA 567
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 30/178 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ F +G G +N KA + F A +G A + G +Y
Sbjct: 301 GRTFTNGIGTSQNYPKAAEKFRLAAEQGHANAQFNLGRIY-------------------- 340
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ LG+ EA+K +A+ G V AQY LA+ G G+ +L EAA WY A
Sbjct: 341 ----EIGLGVDQDYNEALKWYIRAAEQGVVDAQYNLAVMYANGTGISQDLAEAAAWYHFA 396
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 279
A+ G+ A YN Y+ G+G+ A +W++ AA+ GH +AQ E G+G+
Sbjct: 397 AKQGHPDAQYNLGFLYATGQGVEQDEATAARWVRLAANQGHAEAQYRIGRAYEDGVGV 454
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA---MVDAGLMYWEMDKKEAAISL-Y 160
L G + GRGV ++ +KA + ++ A++G+ A + + ++ + A I+ Y
Sbjct: 226 LELGHIYADGRGVSRDYEKAKEWYVLAASQGNMGAHRSLDQISNLGEDLKQHYADIAKDY 285
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA ++LG ++ +A + A+ GH AQ+ L G G
Sbjct: 286 RKAAEKHLAGFHYSLGRTFTNGIGTSQNYPKAAEKFRLAAEQGHANAQFNLGRIYEIGLG 345
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
VD + EA +WY+RAAE G V A YN ++ Y+ G G+ +A W AA GH AQ
Sbjct: 346 VDQDYNEALKWYIRAAEQGVVDAQYNLAVMYANGTGISQDLAEAAAWYHFAAKQGHPDAQ 405
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 305
G G E + A ++ LA G A +
Sbjct: 406 YNLGFLYATGQGVEQDEATAARWVRLAANQGHAEAQY 442
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ AQY+LAL H G+GV + EA +WY RAA G+ A Y+ G+G+ ++
Sbjct: 148 GYASAQYRLALLFHDGKGVPKDYSEAEKWYRRAASNGHSGAQLELGYMYANGQGVQQDYQ 207
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA----DH 305
+A KW +AA G+ AQLE G ++ +G + KA + LA G A D
Sbjct: 208 EAEKWYLKAAKQGNADAQLELGH-IYADGRGVSRDYEKAKEWYVLAASQGNMGAHRSLDQ 266
Query: 306 VKNV 309
+ N+
Sbjct: 267 ISNL 270
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
E K + ++ G +QY+L + +GV + +AA W+ AAE G+V A Y +
Sbjct: 28 EDFKTISASAEQGDFHSQYKLGILYEEAQGVPQDYTKAANWFRLAAEQGHVSAQYRLADL 87
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKA--QLEHGLGLFTEG 283
Y G G+P S ++A KW + AAD GH KA +LE+ LF +G
Sbjct: 88 YHKGRGVPQSFKEAEKWYQLAADKGHPKALSELEY---LFNKG 127
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
F G+GV K+ +A + + A+ G + A ++ G MY
Sbjct: 160 FHDGKGVPKDYSEAEKWYRRAASNGHSGAQLELGYMY---------------------AN 198
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
GQ G+ +EA K +A+ G+ AQ +L GRGV + ++A WY+ AA
Sbjct: 199 GQ---GVQQDYQEAEKWYLKAAKQGNADAQLELGHIYADGRGVSRDYEKAKEWYVLAASQ 255
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G + A + + GE L + K ++AA+
Sbjct: 256 GNMGAHRSLDQISNLGEDLKQHYADIAKDYRKAAE 290
>gi|260753303|ref|YP_003226196.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552666|gb|ACV75612.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 274
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 15/166 (9%)
Query: 135 GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-------- 181
G+ A D G Y+ D K+A IS Y++AA G P Q+ LG + LQ
Sbjct: 45 GNPKAQTDLGTAYYNGQGMAQDYKQA-ISWYQKAANQGYPLAQYYLGNACLQGIGVTQSD 103
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E+AV +A+ G AQY LA+ + GRGV N +A+ W+ R+A G+V A + +
Sbjct: 104 EQAVSWYQKAANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGV 163
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
Y G G+P +A W +AAD G+ AQ GL ++ EG+++K
Sbjct: 164 MYRNGAGIPEDDDRALFWFHKAADKGYADAQYNLGL-IYHEGKVVK 208
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+G+ ++ +A+ + K A +G LA G + E A+S Y++A
Sbjct: 54 GTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGIGVTQSDEQAVSWYQKA 113
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY-QASI-------AGHVRAQYQLALCLHRGRGVDF 215
A G Q++L I+Y V Y QAS G V AQ+ L + G G+
Sbjct: 114 ANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPE 173
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ A W+ +AA+ GY A YN L Y G+ + +QA W ++AA+ G +A+
Sbjct: 174 DDDRALFWFHKAADKGYADAQYNLGLIYHEGKVVKKDEKQATFWYQQAANQGLVEAEFNL 233
Query: 276 GL----GLFTEGEMMKAVVYLELATRAGETAADHV 306
G+ G + + KA +LE A G++ A V
Sbjct: 234 GIAYLKGQGVQKDKDKATFWLEKAADKGDSHAQDV 268
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L Q + AG+ +AQ L + G+G+ + ++A WY +AA GY A Y G
Sbjct: 38 LEQKARAGNPKAQTDLGTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGI 97
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
G+ S QA W ++AA+ G +AQ + +T
Sbjct: 98 GVTQSDEQAVSWYQKAANQGLAEAQYSLAIAYYT 131
>gi|254454439|ref|ZP_05067876.1| Sel1 repeat family [Octadecabacter arcticus 238]
gi|198268845|gb|EDY93115.1| Sel1 repeat family [Octadecabacter arcticus 238]
Length = 327
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAG 195
GL + A++ ++ A G+ + Q+NLG+ Y E V L Y A+ G
Sbjct: 49 GLAAYNAKNYANALTEWKTIAEQGNASAQYNLGLMYDTGEVVPLDYAEAMNWYRLAAQQG 108
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
H +AQ L H+G+GV + EA +WY RAAE G +A+YN L Y GE + + +
Sbjct: 109 HAKAQSNFGLMYHKGKGVLQDFSEAMKWYRRAAEHGGSKALYNLGLMYDNGEAVSQDYVK 168
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVI 310
A KW + AA+ GH AQ G ++ GE + + V + LA G++ A + +
Sbjct: 169 AVKWYRLAAEKGHALAQYNLGY-MYKNGEGVPQDYAETVKWFRLAAEQGDSDAQNNLGAM 227
Query: 311 LQQLSATSRDRA 322
+D A
Sbjct: 228 YDTGEGVPQDYA 239
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 106/246 (43%), Gaps = 18/246 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G V + +A++ + A +G A + GLMY + + A+ YR+A
Sbjct: 81 GLMYDTGEVVPLDYAEAMNWYRLAAQQGHAKAQSNFGLMYHKGKGVLQDFSEAMKWYRRA 140
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G +NLG+ Y EAV Y ++ GH AQY L G GV
Sbjct: 141 AEHGGSKALYNLGLMYDNGEAVSQDYVKAVKWYRLAAEKGHALAQYNLGYMYKNGEGVPQ 200
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ E +W+ AAE G A N Y GEG+P + +A KW + AA+ G AQL
Sbjct: 201 DYAETVKWFRLAAEQGDSDAQNNLGAMYDTGEGVPQDYAEAAKWYQLAAEQGDADAQLNL 260
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 331
G LG ++A ++ +A GE ++ +Q+++ +A W
Sbjct: 261 GTIYALGHGIPQNFIRAHMWFNVAAIKGEPDGVKGRDAAAKQMTSVDISKAQTKAREWTL 320
Query: 332 M--PSL 335
+ PSL
Sbjct: 321 LHGPSL 326
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 78/177 (44%), Gaps = 18/177 (10%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AIS 158
+G + G+GV ++ +A+ + + A G + A+ + GLMY D EA A+
Sbjct: 115 NFGLMYHKGKGVLQDFSEAMKWYRRAAEHGGSKALYNLGLMY---DNGEAVSQDYVKAVK 171
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRG 210
YR AA G Q+NLG Y E V Y ++ G AQ L G
Sbjct: 172 WYRLAAEKGHALAQYNLGYMYKNGEGVPQDYAETVKWFRLAAEQGDSDAQNNLGAMYDTG 231
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GV + EAA+WY AAE G A N Y+ G G+P + +A W AA G
Sbjct: 232 EGVPQDYAEAAKWYQLAAEQGDADAQLNLGTIYALGHGIPQNFIRAHMWFNVAAIKG 288
>gi|290982386|ref|XP_002673911.1| predicted protein [Naegleria gruberi]
gi|284087498|gb|EFC41167.1| predicted protein [Naegleria gruberi]
Length = 360
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 14/226 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+G+GV+KN KA + FLK A +G+ A + +Y++M + Y + A G
Sbjct: 72 GALYKNGQGVKKNYSKAEEWFLKAAEKGNESAHRNLPPLYYKMKDYSKSFEWYLKLAEKG 131
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQE 219
D Q+++G +Y + E ++ Y + G+ AQ+ + +G G++ ++ +
Sbjct: 132 DAKAQYSIGKAYKKGEGIEKDYSKAFEWFLKSAEIGNADAQFNVGNAYKKGEGIEKDIVK 191
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
+ W+L+AAE G A T+ Y GEG+ +A +W +AA+ G +AQ G +
Sbjct: 192 SYEWFLKAAENGNRLAQCCTAKRYFIGEGVEKDSSKAFEWFLKAAENGETEAQFTVG-SM 250
Query: 280 FTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
F GE + KA + A G+ A + T +D
Sbjct: 251 FYNGEGIEKDISKAFEWYVKAAEKGQIEAQFYVGLAYHDGDGTDQD 296
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G +K G G+ K++ K+ + FLK A G+ LA Y+ E D +A + +
Sbjct: 176 GNAYKKGEGIEKDIVKSYEWFLKAAENGNRLAQCCTAKRYFIGEGVEKDSSKA-FEWFLK 234
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ QF +G + E ++ +A+ G + AQ+ + L H G G D
Sbjct: 235 AAENGETEAQFTVGSMFYNGEGIEKDISKAFEWYVKAAEKGQIEAQFYVGLAYHDGDGTD 294
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ ++ W+L+AAE GY A Y L Y G G+ +A +W +AA G+ KAQ
Sbjct: 295 QDYSKSFEWFLKAAESGYTEAQYFVGLAYELGTGVEKDSSKAFEWYLKAATNGNEKAQ 352
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI----SLYRQA 163
GK +K G G+ K+ KA + FLK A G+ A + G Y + + E I + +A
Sbjct: 140 GKAYKKGEGIEKDYSKAFEWFLKSAEIGNADAQFNVGNAYKKGEGIEKDIVKSYEWFLKA 199
Query: 164 AVLGDPAGQ--------FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ Q G+ +A + +A+ G AQ+ + + G G++
Sbjct: 200 AENGNRLAQCCTAKRYFIGEGVEKDSSKAFEWFLKAAENGETEAQFTVGSMFYNGEGIEK 259
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 272
++ +A WY++AAE G + A + L Y G+G + ++ +W +AA+ G+ +AQ
Sbjct: 260 DISKAFEWYVKAAEKGQIEAQFYVGLAYHDGDGTDQDYSKSFEWFLKAAESGYTEAQYFV 319
Query: 273 -LEHGLGLFTEGEMMKAVV-YLELATRAGETAADHV 306
L + LG E + KA YL+ AT E A +++
Sbjct: 320 GLAYELGTGVEKDSSKAFEWYLKAATNGNEKAQNNI 355
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 99/259 (38%), Gaps = 48/259 (18%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAV 165
++ G V K+ KA + F+KGA +G + GL+Y + + Y +AA
Sbjct: 2 KYLDGVEVEKDEVKAFEWFMKGAEQGCIESQNRVGLLYHKGMGVQKDYSKSFEWYSKAAE 61
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY------------------------------------ 189
GD QFN+G Y + VK Y
Sbjct: 62 KGDAKAQFNIGALYKNGQGVKKNYSKAEEWFLKAAEKGNESAHRNLPPLYYKMKDYSKSF 121
Query: 190 ----QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
+ + G +AQY + +G G++ + +A W+L++AE G A +N Y
Sbjct: 122 EWYLKLAEKGDAKAQYSIGKAYKKGEGIEKDYSKAFEWFLKSAEIGNADAQFNVGNAYKK 181
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQL----EHGLGLFTEGEMMKAVVYLELATRAGET 301
GEG+ ++ +W +AA+ G+ AQ + +G E + KA + A GET
Sbjct: 182 GEGIEKDIVKSYEWFLKAAENGNRLAQCCTAKRYFIGEGVEKDSSKAFEWFLKAAENGET 241
Query: 302 AADHVKNVILQQLSATSRD 320
A + +D
Sbjct: 242 EAQFTVGSMFYNGEGIEKD 260
>gi|237748162|ref|ZP_04578642.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379524|gb|EEO29615.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 489
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 101/221 (45%), Gaps = 23/221 (10%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--------WEMDKKEAAI 157
RW GRGV KN +AL F K A G A + G+M + D EAA
Sbjct: 169 RWALMLASGRGVAKNEGEALKWFKKAAVAGDVEAQRNLGIMLSTGKGVTGGKPDFAEAA- 227
Query: 158 SLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHR 209
Y AA GD Q+ LGI Y QE+A+ L A+ G A+Y + L
Sbjct: 228 RWYGLAAKKGDAKAQYGLGILYAKGQGVAPDQEKALILYRMAATQGLATAEYAVGLAYAY 287
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
GRG N +AA W+ AA+ G VRA YN +L G G P+ A KW AA+ G
Sbjct: 288 GRGTAQNDVKAADWFEAAAQQGVVRAQYNLALMLEAGRGRPVDTVAASKWFLMAAEKGLR 347
Query: 270 KAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADH 305
+AQ G + EG+ + KAV + E A AG+ A +
Sbjct: 348 EAQYNMGY-HYAEGKGVPRDQGKAVFWYEKAAAAGDVKAQY 387
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G + +GRG +N KA D F A +G A + LM + AA + A
Sbjct: 282 GLAYAYGRGTAQNDVKAADWFEAAAQQGVVRAQYNLALMLEAGRGRPVDTVAASKWFLMA 341
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+N+G Y Q +AV +A+ AG V+AQY L + G
Sbjct: 342 AEKGLREAQYNMGYHYAEGKGVPRDQGKAVFWYEKAAAAGDVKAQYNLGMLYLNGVNGKA 401
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
+ ++AA +Y AA GY AMY ++ Y G G+ S++ A +W +RA
Sbjct: 402 DDEKAAFFYRMAAGAGYGPAMYRLAVLYEEGRGVKQSYQLAGEWYERA 449
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 7/155 (4%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+G+ + A+ L +A+ G RA+ L + + + ++AARW+ RAA G
Sbjct: 105 GIGLPKDSQVALTWLSKAAAQGDARAKTALGILMQSAGPGSQHTEQAARWFERAAASGEP 164
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-------EGEMM 286
A +L + G G+ + +A KW K+AA G +AQ G+ L T + +
Sbjct: 165 EAQRRWALMLASGRGVAKNEGEALKWFKKAAVAGDVEAQRNLGIMLSTGKGVTGGKPDFA 224
Query: 287 KAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
+A + LA + G+ A + ++ + + D+
Sbjct: 225 EAARWYGLAAKKGDAKAQYGLGILYAKGQGVAPDQ 259
>gi|417404664|gb|JAA49074.1| Putative extracellular protein sel-1 [Desmodus rotundus]
Length = 794
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHNAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
EG+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KEGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|399116439|emb|CCG19245.1| conserved hypothetical Sel1 repeat protein [Taylorella
asinigenitalis 14/45]
Length = 339
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK-EA 155
+A G + G GV KN +++ + K AA+G A+ + G MY +DK +
Sbjct: 87 DAHYQFELGYMYFKGEGVTKNYTQSVQWYEKSAAQGFVHALNNLGYMYLMGLGVDKDYKK 146
Query: 156 AISLYRQAAVLGDPAGQFNLGISY-----LQEEAVK---LLYQASIAGHVRAQYQLALCL 207
A + +A+ G P +NLG Y ++ A K L A+ AG+V A + L LC
Sbjct: 147 AFENFEKASTKGFPEAIYNLGYLYQKGWGVEPNAAKARDLFETAATAGNVSAMFNLGLCY 206
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRG D + ++A WY +AA G+V A N Y G+G+ + +A +W K+AA
Sbjct: 207 QYGRGTDKDAKKAKEWYEKAANAGHVLAQRNLGYLYEKGDGIDHDYDEAMEWYKKAAQKN 266
Query: 268 HGKAQLEHGLGLFTEGE 284
AQ G L+ G+
Sbjct: 267 EPIAQYNVG-ALYENGK 282
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AIS 158
L G + G GV K+ KA ++F K + +G A+ + G +Y W ++ A A
Sbjct: 126 ALNNLGYMYLMGLGVDKDYKKAFENFEKASTKGFPEAIYNLGYLYQKGWGVEPNAAKARD 185
Query: 159 LYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRG 210
L+ AA G+ + FNLG+ Y ++A + +A+ AGHV AQ L +G
Sbjct: 186 LFETAATAGNVSAMFNLGLCYQYGRGTDKDAKKAKEWYEKAANAGHVLAQRNLGYLYEKG 245
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G+D + EA WY +AA+ A YN Y G+G + + A W + A D
Sbjct: 246 DGIDHDYDEAMEWYKKAAQKNEPIAQYNVGALYENGKGTTKNFKNATTWYQLACD 300
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 50/203 (24%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLY------------------------------------- 189
GD QF LG Y + E V Y
Sbjct: 86 GDAHYQFELGYMYFKGEGVTKNYTQSVQWYEKSAAQGFVHALNNLGYMYLMGLGVDKDYK 145
Query: 190 -------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+AS G A Y L +G GV+ N +A + AA G V AM+N LC
Sbjct: 146 KAFENFEKASTKGFPEAIYNLGYLYQKGWGVEPNAAKARDLFETAATAGNVSAMFNLGLC 205
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATR 297
Y +G G ++A++W ++AA+ GH AQ G L+ +G+ + +A+ + + A +
Sbjct: 206 YQYGRGTDKDAKKAKEWYEKAANAGHVLAQRNLGY-LYEKGDGIDHDYDEAMEWYKKAAQ 264
Query: 298 AGETAADHVKNVILQQLSATSRD 320
E A + + + T+++
Sbjct: 265 KNEPIAQYNVGALYENGKGTTKN 287
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 14/146 (9%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAI 157
+ G ++ G GV N KA D F A G+ AM + GL Y + D K+A
Sbjct: 162 AIYNLGYLYQKGWGVEPNAAKARDLFETAATAGNVSAMFNLGLCYQYGRGTDKDAKKAK- 220
Query: 158 SLYRQAAVLGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHR 209
Y +AA G Q NLG I + +EA++ +A+ AQY +
Sbjct: 221 EWYEKAANAGHVLAQRNLGYLYEKGDGIDHDYDEAMEWYKKAAQKNEPIAQYNVGALYEN 280
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRA 235
G+G N + A WY A + + A
Sbjct: 281 GKGTTKNFKNATTWYQLACDNKFESA 306
>gi|381157692|ref|ZP_09866926.1| Sel1 repeat protein [Thiorhodovibrio sp. 970]
gi|380881555|gb|EIC23645.1| Sel1 repeat protein [Thiorhodovibrio sp. 970]
Length = 241
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 97/189 (51%), Gaps = 24/189 (12%)
Query: 136 STLAMVDAGL-----MYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ 190
STLA + L ++ + D EA + L+ +AA+ G P QFNLG+ Y ++ V L
Sbjct: 26 STLADESSNLRQAIELFQKGDIAEAEV-LFERAALAGSPQAQFNLGVMY--DQGVGLPED 82
Query: 191 ASIA----------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
S A G AQ+ LAL +G GV + +AARWY +AA+ G RA +N +
Sbjct: 83 DSAAARWYALAAEQGDAEAQFNLALLYDKGNGVPQDRAQAARWYRQAAQQGMARAQFNLA 142
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM-----MKAVVYLELA 295
L + GEG+ S A W RAA G+ KAQ+ GL L+ EGE +KA +L L+
Sbjct: 143 LMHETGEGVEESIDDALDWYLRAARQGYLKAQVNLGL-LYFEGERVPRDDIKAYTWLGLS 201
Query: 296 TRAGETAAD 304
G AD
Sbjct: 202 AAQGYAEAD 210
>gi|163795919|ref|ZP_02189883.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
gi|159178952|gb|EDP63488.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
Length = 481
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +K G GV ++ +AL F K A +G A + G MY+ D EA + +R+
Sbjct: 62 GAAYKLGLGVTQDNAEALKWFRKSAEQGFAKAQNNLGWMYYNGEGVTQDYAEA-LKWHRK 120
Query: 163 AAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G QF +G+ Y Q+ EAVK +A+ G+ AQY+L RG GV
Sbjct: 121 AAEQGRADAQFIIGLMYNIGKGVTQDYAEAVKWYRKAAEQGYADAQYKLGWMYARGDGVT 180
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA +WY +AAE G A +N + Y G G+ + +A KW ++AA+ G+ AQ
Sbjct: 181 QDYAEAVKWYRKAAEQGDAVAQHNLGVSYDNGNGVTQDNAEAVKWYRKAAEQGYAAAQYN 240
Query: 275 HGLGLFTEGEMMKAVV 290
G+ + +++ +
Sbjct: 241 LGVSYYNGDGVLQDTI 256
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQ L G GV + EA +W+ ++AE G+ +A N Y GEG+ +
Sbjct: 53 GVAWAQNILGAAYKLGLGVTQDNAEALKWFRKSAEQGFAKAQNNLGWMYYNGEGVTQDYA 112
Query: 255 QARKWMKRAADCGHGKAQLEHGL 277
+A KW ++AA+ G AQ GL
Sbjct: 113 EALKWHRKAAEQGRADAQFIIGL 135
>gi|54294116|ref|YP_126531.1| hypothetical protein lpl1180 [Legionella pneumophila str. Lens]
gi|53753948|emb|CAH15419.1| hypothetical protein lpl1180 [Legionella pneumophila str. Lens]
Length = 490
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 113/230 (49%), Gaps = 18/230 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++ G GV+K+L KA+ + K A +G A + G++Y + + + A+ +++A
Sbjct: 52 GLQYEKGDGVKKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVSQNSQQAMHWFKKA 111
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
+ G GQ N+GI Y VK + YQ A+ G+ QY LA+ G G+
Sbjct: 112 SEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPK 171
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
++++A WY++AAE G + A N + Y GE +P + A W RAA+ G AQ
Sbjct: 172 DIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 231
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ L+ G + KA+ + E A G A + I +Q T +D
Sbjct: 232 GV-LYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGVGTEKD 280
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 117/232 (50%), Gaps = 19/232 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISLYRQAAVL 166
+ +G G+ K++ KA+ ++K A +G A + G++Y ++ +AAIS Y +AA
Sbjct: 163 YMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANE 222
Query: 167 GDPAGQFNLGISYLQ-----EEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q NLG+ Y+ ++ K +Y +A+ G +AQ L +G G + +++
Sbjct: 223 GSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGVGTEKDMK 282
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G+ A N + YS +G +++A W K+AAD G +AQ GL
Sbjct: 283 KAIYWYEKAAENGFTLAQNNLGVLYS-NDGELQDYKKAYLWFKKAADQGFAEAQNNLGL- 340
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ +G + +AV++ + A G A H ++ + +D + +
Sbjct: 341 MYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKDNKLAI 392
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 15/216 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 268 GYIYEQGVGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 327
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLHRGRGVDFN 216
G Q NLG+ Y++ + + Y ++ + RA Q+ LA+ +G G+ +
Sbjct: 328 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 387
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A +WY +AAE G A N ++ Y GEG+ + ++A W ++AA+ G AQ+ G
Sbjct: 388 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKIDFKKAMYWYQKAAEQGLDLAQINLG 447
Query: 277 L----GLFTEGEMMKAVVYLELATRAGETAADHVKN 308
+ G+ + + KA ++ A +G A + N
Sbjct: 448 IMYLDGMGVDKDFAKAKYWIGKAKDSGSQDALTIWN 483
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 132 AARGSTLAMVDAGLMYWEMD--KKE--AAISLYRQAAVLGDPAGQFNLGISYLQEEAVK- 186
A +G A + GL Y + D KK+ AI Y++AA G Q NLG+ YL+ E V
Sbjct: 40 AEQGDAQAQFELGLQYEKGDGVKKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVSQ 99
Query: 187 -------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+AS G Q + + G GV +L +A WY +AAEGG YN
Sbjct: 100 NSQQAMHWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNL 159
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
++ Y +G G+P ++A W +AA+ G AQ G+ L+ GE
Sbjct: 160 AVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGV-LYERGE 203
>gi|397676941|ref|YP_006518479.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397630|gb|AFN56957.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 274
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 15/166 (9%)
Query: 135 GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-------- 181
G+ A D G Y+ D K+A IS Y++AA G P Q+ LG + LQ
Sbjct: 45 GNPKAQTDLGTAYYNGQGMAQDYKQA-ISWYQKAANQGYPLAQYYLGNACLQGIGLTQSD 103
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E+AV +A+ G AQY LA+ + GRGV N +A+ W+ R+A G+V A + +
Sbjct: 104 EQAVSWYQKAANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGV 163
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
Y G G+P +A W +AAD G+ AQ GL ++ EG+++K
Sbjct: 164 MYRNGAGIPEDDDRALFWFHKAADKGYADAQYNLGL-IYHEGKVVK 208
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+G+ ++ +A+ + K A +G LA G + E A+S Y++A
Sbjct: 54 GTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGIGLTQSDEQAVSWYQKA 113
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY-QASI-------AGHVRAQYQLALCLHRGRGVDF 215
A G Q++L I+Y V Y QAS G V AQ+ L + G G+
Sbjct: 114 ANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPE 173
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ A W+ +AA+ GY A YN L Y G+ + +QA W ++AA+ G +A+
Sbjct: 174 DDDRALFWFHKAADKGYADAQYNLGLIYHEGKVVKKDEKQAAFWYQQAANQGLVEAEFNL 233
Query: 276 GL----GLFTEGEMMKAVVYLELATRAGETAADHV 306
G+ G + + KA +LE A G++ A V
Sbjct: 234 GIAYLKGQGVQKDKDKATFWLEKAADKGDSHAQDV 268
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 29/191 (15%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
+A S K+ N L + ++ + + GRGV +N +A F + A +G A
Sbjct: 105 QAVSWYQKAANQGLAEAQYSLAI-----AYYTGRGVTQNYGQASFWFQRSANQGFVPAQF 159
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQY 201
G+MY R A GI + A+ ++A+ G+ AQY
Sbjct: 160 YLGVMY-------------RNGA-----------GIPEDDDRALFWFHKAADKGYADAQY 195
Query: 202 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261
L L H G+ V + ++AA WY +AA G V A +N + Y G+G+ +A W++
Sbjct: 196 NLGLIYHEGKVVKKDEKQAAFWYQQAANQGLVEAEFNLGIAYLKGQGVQKDKDKATFWLE 255
Query: 262 RAADCGHGKAQ 272
+AAD G AQ
Sbjct: 256 KAADKGDSHAQ 266
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L Q + AG+ +AQ L + G+G+ + ++A WY +AA GY A Y G
Sbjct: 38 LEQKARAGNPKAQTDLGTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGI 97
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
GL S QA W ++AA+ G +AQ + +T
Sbjct: 98 GLTQSDEQAVSWYQKAANQGLAEAQYSLAIAYYT 131
>gi|257094316|ref|YP_003167957.1| peptidase C14 caspase catalytic subunit p20 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046840|gb|ACV36028.1| peptidase C14 caspase catalytic subunit p20 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 878
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGD 168
G+GV K+ +A+ F K A G ++ G Y+ D+ EA + YR+AA G+
Sbjct: 664 GKGVAKDEVEAVKWFRKSAEEGDAGGQLNLGHAYFIGTGVAKDEVEA-VKWYRKAAEQGN 722
Query: 169 PAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
GQFNLG++Y + EAVK + + G+ R Q L +G GV N EA
Sbjct: 723 ATGQFNLGVAYETGIGVAKDEVEAVKWYRKTAEQGNARGQLNLGYAYFKGIGVAKNEVEA 782
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LE 274
+WY +AAE G + Y G G+ + +A KW ++AA+ G+ Q
Sbjct: 783 VKWYRKAAEQGDATGQLKLGVAYKTGTGVAKNEVEAVKWSRKAAEQGNADGQWFLGYAYF 842
Query: 275 HGLGLFTEGEMMKAVVYLELATRAG-ETAADHVKNV 309
HG+GL + ++AV + A G +TA D ++ +
Sbjct: 843 HGIGLAK--DEVEAVKWFRKAAEQGHQTAIDRLRAI 876
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 14/187 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV K+ +A+ + K A +G+ + G Y+ D+ EA + +R+
Sbjct: 622 GYAYFNGIGVAKDEVEAVKWYRKAAEQGNARGQSNLGHAYFIGKGVAKDEVEA-VKWFRK 680
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A GD GQ NLG +Y + EAVK +A+ G+ Q+ L + G GV
Sbjct: 681 SAEEGDAGGQLNLGHAYFIGTGVAKDEVEAVKWYRKAAEQGNATGQFNLGVAYETGIGVA 740
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA +WY + AE G R N Y G G+ + +A KW ++AA+ G QL+
Sbjct: 741 KDEVEAVKWYRKTAEQGNARGQLNLGYAYFKGIGVAKNEVEAVKWYRKAAEQGDATGQLK 800
Query: 275 HGLGLFT 281
G+ T
Sbjct: 801 LGVAYKT 807
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 68/172 (39%), Gaps = 35/172 (20%)
Query: 116 GVRKNLDK---ALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQAAVLGD 168
GVR LDK +D A RG+ A D MY W + K ++ + R AA G+
Sbjct: 555 GVRSYLDKHPTKIDELKTLARRGNADAQADLARMYVEGWGVPKDDSDGLRWARSAADQGN 614
Query: 169 PAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
GQ LG +Y G GV + EA +WY +AA
Sbjct: 615 SRGQNTLGYAYFN----------------------------GIGVAKDEVEAVKWYRKAA 646
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
E G R N Y G+G+ +A KW +++A+ G QL G F
Sbjct: 647 EQGNARGQSNLGHAYFIGKGVAKDEVEAVKWFRKSAEEGDAGGQLNLGHAYF 698
>gi|344925543|ref|ZP_08779004.1| Sel1 domain-containing protein [Candidatus Odyssella
thessalonicensis L13]
Length = 856
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQF 173
++ D+A+ + A +GS A G+ Y + + KEA + LYR AA G Q
Sbjct: 642 RDADQAVKWYKCAAKQGSVEAQFWLGVCYDLGVGIKQNYKEA-VKLYRLAAEKGHEGAQL 700
Query: 174 NLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
NL Y + +EAVK A+ G++ Q+ L G+GV NL++A +WY+
Sbjct: 701 NLSTCYHEGTGVERNYKEAVKWCKLAAKQGNIACQHDLGHYYDVGQGVTKNLRKAFKWYM 760
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
RAAE G+ + YN +C+ G+G+ H +A KW +RAA+ G A E G
Sbjct: 761 RAAEQGHSESQYNVGICFYEGQGVTRDHHEAVKWYRRAAEQGDSDAYCELG 811
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 119 KNLD--KALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVLGDPAGQ 172
+NLD +AL+ A RG A G Y++ M + + A+ Y+ AA G Q
Sbjct: 604 RNLDLGEALEWLKGNAERGLMNAQSSLGDWYYQNILMPRDADQAVKWYKCAAKQGSVEAQ 663
Query: 173 FNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
F LG+ Y +EAVKL A+ GH AQ L+ C H G GV+ N +EA +W
Sbjct: 664 FWLGVCYDLGVGIKQNYKEAVKLYRLAAEKGHEGAQLNLSTCYHEGTGVERNYKEAVKWC 723
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
AA+ G + ++ Y G+G+ + R+A KW RAA+ GH ++Q G+ F EG+
Sbjct: 724 KLAAKQGNIACQHDLGHYYDVGQGVTKNLRKAFKWYMRAAEQGHSESQYNVGI-CFYEGQ 782
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
+ G+ + ++ +A + A G A G+MY E E AI+ ++ AA
Sbjct: 419 YYQGKFIARDYSEARKWYQLAAVSGDAEAQFWLGIMYKEGQGGEVNHLEAINWFKSAANN 478
Query: 167 GDPAGQFNLGISYLQEEA-------VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
G LG Y +E A VK A+ G QY A + G+GV + E
Sbjct: 479 GCAPAFVKLGNYYSEEGAFQDLNVAVKYYKLAAEHGEKWGQYNFANLYYLGKGVKQDYTE 538
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
AA+WY RAA G A +N +CY G+G+ + ++A KW +RAAD
Sbjct: 539 AAKWYKRAALQGIASAQFNMGVCYEQGQGVAQNIKKAEKWYRRAAD 584
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G + G G+++N +A+ + A +G A ++ Y E E A+ + A
Sbjct: 667 GVCYDLGVGIKQNYKEAVKLYRLAAEKGHEGAQLNLSTCYHEGTGVERNYKEAVKWCKLA 726
Query: 164 AVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ A Q +LG Y + V K +A+ GH +QY + +C + G+GV
Sbjct: 727 AKQGNIACQHDLGHYYDVGQGVTKNLRKAFKWYMRAAEQGHSESQYNVGICFYEGQGVTR 786
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ EA +WY RAAE G A CY +G G+P +A K+ + AA
Sbjct: 787 DHHEAVKWYRRAAEQGDSDAYCELGHCYIYGHGVPRDLAEALKYYRMAA 835
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAAISLYRQAA 164
G +K G+G N +A++ F A G A V G Y E A+ Y+ AA
Sbjct: 452 GIMYKEGQGGEVNHLEAINWFKSAANNGCAPAFVKLGNYYSEEGAFQDLNVAVKYYKLAA 511
Query: 165 VLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
G+ GQ+N G+ EA K +A++ G AQ+ + +C +G+GV N
Sbjct: 512 EHGEKWGQYNFANLYYLGKGVKQDYTEAAKWYKRAALQGIASAQFNMGVCYEQGQGVAQN 571
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+++A +WY RAA+ A N Y G L +A +W+K A+ G AQ
Sbjct: 572 IKKAEKWYRRAADQNDKSAYGNLLALYQKDGGRNLDLGEALEWLKGNAERGLMNAQ 627
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEA-----VKLLYQASIA---GHVRAQYQLALCLHRGRG 212
R AA G Q NL I Y A K++ S+A G +AQ LA ++G+
Sbjct: 365 RAAAKQGFAPAQRNLAILYRDSLASIASSTKMIKWCSLAAEQGDTQAQTMLASFYYQGKF 424
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ + EA +WY AA G A + + Y G+G ++H +A W K AA+ G A
Sbjct: 425 IARDYSEARKWYQLAAVSGDAEAQFWLGIMYKEGQGGEVNHLEAINWFKSAANNGCAPAF 484
Query: 273 LEHGLGLFTEG---EMMKAVVYLELATRAGE 300
++ G EG ++ AV Y +LA GE
Sbjct: 485 VKLGNYYSEEGAFQDLNVAVKYYKLAAEHGE 515
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 180 LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
L +AV+ A+ + AQ L C +G GV +L +A +W AA+ G+ A N
Sbjct: 320 LHTQAVEFFSLAAENNCLEAQSNLGYCYVKGEGVPLDLMQAKKWLRAAAKQGFAPAQRNL 379
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELA 295
++ Y S + KW AA+ G +AQ + G F + +A + +LA
Sbjct: 380 AILYRDSLASIASSTKMIKWCSLAAEQGDTQAQTMLASFYYQGKFIARDYSEARKWYQLA 439
Query: 296 TRAGETAA 303
+G+ A
Sbjct: 440 AVSGDAEA 447
>gi|429964801|gb|ELA46799.1| hypothetical protein VCUG_01699 [Vavraia culicis 'floridensis']
Length = 585
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKK 153
+ + + G ++ G+G KN+ A + + A G+ A G Y E +
Sbjct: 197 MNDPVATYNMGFCYEEGKGTVKNMKYAFLWYKRAAEMGNPFAQNSLGYCYEEGLGAYKDE 256
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
A +LYR++A+ G P Q NL + Q +++ + +A+I G RAQ+ L
Sbjct: 257 NKAFTLYRESALQGYPWAQSNLAYCFQQGIGVDKDLKKSFEWYERAAIQGLSRAQHNLGH 316
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
C H+G G D N+ EA WY RAA+ + A ++ CY GEG+P R+A ++ K AA
Sbjct: 317 CYHQGMGTDKNVTEAVMWYRRAAKQKNLYAFHSLGNCYQNGEGVPKDEREAVRYYKLAA 375
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 35/216 (16%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV------DAGLMYWEMDKK 153
E++ +L + F G GV +N+ KA ++ +++ S LA+V G +D+
Sbjct: 42 ESLAILSFCYEF--GIGVHRNIKKAEYGYMISSSKNSGLALVRLTFLRKFGRPSVRIDRL 99
Query: 154 EA-------------AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQ 200
EA +++ +AA LG+ Q+ LG Y V+ + SI + R+
Sbjct: 100 EAQILQNKLRTIGSASVAWLEKAAKLGNSYAQYCLGTCYHDALGVRRCTKRSIEWYTRSA 159
Query: 201 YQ--------LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
Q L C G GV+ N A YL+AA A YN CY G+G +
Sbjct: 160 AQRNPCAIGVLGFCYLEGFGVEKNEHRAFALYLQAARMNDPVATYNMGFCYEEGKGTVKN 219
Query: 253 HRQARKWMKRAADCGHGKAQ------LEHGLGLFTE 282
+ A W KRAA+ G+ AQ E GLG + +
Sbjct: 220 MKYAFLWYKRAAEMGNPFAQNSLGYCYEEGLGAYKD 255
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 74/186 (39%), Gaps = 14/186 (7%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
AL+ +++ L + R G GV N + K A + A Y E
Sbjct: 375 ALKNFVPSLISLSFCYRL--GLGVDTNALSSFHYMKKAAELHNAYAQNCLAFFYEEGYGT 432
Query: 150 MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQY 201
E AI Y ++A +P Q NLG Y + E++V A+ GH RA
Sbjct: 433 KRNIEFAIMWYTKSANANNPWAQTNLGTIYFEGIHVPMDREKSVYYFKLAANQGHSRAYS 492
Query: 202 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261
+L C G V N A +Y +A E GY RA Y CY G G+ + QA +
Sbjct: 493 KLGYCYEEGIVVHKNPSIAFSYYNKATEQGYNRAYYALGRCYERGFGIDFNMNQALSYFY 552
Query: 262 RAADCG 267
+ + G
Sbjct: 553 KGSFYG 558
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 103/262 (39%), Gaps = 40/262 (15%)
Query: 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSF 128
++++ A +LR +W + L + G + GVR+ ++++ +
Sbjct: 96 IDRLEAQILQNKLRTIGSASVAWLEKAAKLGNSYAQYCLGTCYHDALGVRRCTKRSIEWY 155
Query: 129 LKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQEEA 184
+ AA+ + A+ G Y E ++K E A +LY QAA + DP +N+G
Sbjct: 156 TRSAAQRNPCAIGVLGFCYLEGFGVEKNEHRAFALYLQAARMNDPVATYNMG-------- 207
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
C G+G N++ A WY RAAE G A + CY
Sbjct: 208 --------------------FCYEEGKGTVKNMKYAFLWYKRAAEMGNPFAQNSLGYCYE 247
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRA 298
G G +A + +A G+ AQ + G+G+ + ++ K+ + E A
Sbjct: 248 EGLGAYKDENKAFTLYRESALQGYPWAQSNLAYCFQQGIGV--DKDLKKSFEWYERAAIQ 305
Query: 299 GETAADHVKNVILQQLSATSRD 320
G + A H Q T ++
Sbjct: 306 GLSRAQHNLGHCYHQGMGTDKN 327
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVL 166
F+ G GV K+L K+ + + + A +G + A + G Y + DK A+ YR+AA
Sbjct: 282 FQQGIGVDKDLKKSFEWYERAAIQGLSRAQHNLGHCYHQGMGTDKNVTEAVMWYRRAAKQ 341
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
+ +LG Y + EAV+ A++ V + L+ C G GVD N
Sbjct: 342 KNLYAFHSLGNCYQNGEGVPKDEREAVRYYKLAALKNFVPSLISLSFCYRLGLGVDTNAL 401
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 277
+ + +AAE A + Y G G + A W ++A+ + AQ G
Sbjct: 402 SSFHYMKKAAELHNAYAQNCLAFFYEEGYGTKRNIEFAIMWYTKSANANNPWAQTNLGTI 461
Query: 278 ---GLFTEGEMMKAVVYLELATRAGETAA 303
G+ + K+V Y +LA G + A
Sbjct: 462 YFEGIHVPMDREKSVYYFKLAANQGHSRA 490
>gi|290970862|ref|XP_002668285.1| predicted protein [Naegleria gruberi]
gi|284081597|gb|EFC35541.1| predicted protein [Naegleria gruberi]
Length = 748
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 95 LRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE 154
L P ++ VL + G G KN+D L+ FLK A G A + G++Y E +
Sbjct: 588 LMPTEDSEVLFNLAYCYYQGFGTEKNIDLGLELFLKAAENGHIAAQYNIGMIYLEKQDYQ 647
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLAL 205
A ++Q V DP F + Y +A +L +++ GH +AQY LAL
Sbjct: 648 KAFEWFKQCEVHNDPNSLFQYALFYYNGSHIVEKDYTKAFELFLRSAEQGHAQAQYNLAL 707
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
+G G+D + +A W+L+++E G V Y
Sbjct: 708 LYFKGIGIDQDYSKAKEWFLKSSENGLVEESY 739
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
K++ A + + A +G A + GL+Y+ E A + ++A G QFNLG+
Sbjct: 397 EKDISNAAFWYDQSAKQGHGKAQFNLGLLYYMNSLMEPAKHWFLKSAEQGYADAQFNLGV 456
Query: 178 SYLQEEAVK------LLYQASI-------AGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
Y ++ V L QA I GH AQ LA GRGV+ + + WY
Sbjct: 457 VYETDQFVDESERRSQLEQAFIWYMKSAEQGHANAQGYLAQLYEYGRGVERDYSKTIEWY 516
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK---WMKRAADCGHGKAQLEHG 276
++AE G+V + +N +L L L R A WM +AA+ GH AQ G
Sbjct: 517 TKSAEQGFVSSQFNLALM------LHLYERDAETAFYWMGKAAENGHTDAQFNLG 565
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY- 179
++K + KGA G+ G++Y+ A Y Q+A G QFNLG+ Y
Sbjct: 368 IEKTKEELEKGAKEGNADDQNRLGVLYYNEKDISNAAFWYDQSAKQGHGKAQFNLGLLYY 427
Query: 180 ---LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN-----LQEAARWYLRAAEGG 231
L E A +++ G+ AQ+ L + + VD + L++A WY+++AE G
Sbjct: 428 MNSLMEPAKHWFLKSAEQGYADAQFNLGVVYETDQFVDESERRSQLEQAFIWYMKSAEQG 487
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEGEMMKAVV 290
+ A + Y +G G+ + + +W ++A+ G +Q L L E + A
Sbjct: 488 HANAQGYLAQLYEYGRGVERDYSKTIEWYTKSAEQGFVSSQFNLALMLHLYERDAETAFY 547
Query: 291 YLELATRAGETAA 303
++ A G T A
Sbjct: 548 WMGKAAENGHTDA 560
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEAAISLYRQAAVLGD 168
+++GRGV ++ K ++ + K A +G + + LM +E D E A +AA G
Sbjct: 499 YEYGRGVERDYSKTIEWYTKSAEQGFVSSQFNLALMLHLYERDA-ETAFYWMGKAAENGH 557
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
QFNLG YL+ + ++L + + LA C ++G G + N+
Sbjct: 558 TDAQFNLGWLYLKGIGTVKDYSKGFEILSKLMPTEDSEVLFNLAYCYYQGFGTEKNIDLG 617
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+L+AAE G++ A YN + Y + +++A +W K+
Sbjct: 618 LELFLKAAENGHIAAQYNIGMIYLEKQ----DYQKAFEWFKQ 655
>gi|221068722|ref|ZP_03544827.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220713745|gb|EED69113.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 252
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 94/229 (41%), Gaps = 44/229 (19%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
GRG KN ++A F+ A +G + + GLMY E A+ YR AA GD
Sbjct: 50 GRGAPKNDEEAARWFMLAAKQGHAESQSNIGLMYGRGRGVPQSDEEAVKWYRLAAEQGDA 109
Query: 170 AGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
G FNL G++ QEEAV+L A HV +Q L GRGV + QEA
Sbjct: 110 DGLFNLAVMYDDGRGVAENQEEAVRLYRLAVAQNHVSSQSNLGYMYDHGRGVAQDSQEAF 169
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
RWY+ AAE G + +N Y+ G G+ S QA W
Sbjct: 170 RWYMTAAEQGDANSQFNVGSMYALGRGVRQSWPQAYFWAL-------------------- 209
Query: 282 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
LA R GE + + +I ++L R + L V W+
Sbjct: 210 ------------LAARDGEKDSAKQQEIIAKKLKPAQRAKIQLQVQEWK 246
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L QA+ G ++Q++LA GRG N +EAARW++ AA+ G+ + N L Y G
Sbjct: 28 LLQAAEGGDAQSQFKLAAAYLTGRGAPKNDEEAARWFMLAAKQGHAESQSNIGLMYGRGR 87
Query: 248 GLPLSHRQARKWMKRAADCG 267
G+P S +A KW + AA+ G
Sbjct: 88 GVPQSDEEAVKWYRLAAEQG 107
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLF 280
L+AAEGG ++ + + Y G G P + +A +W AA GH ++Q L +G G
Sbjct: 29 LQAAEGGDAQSQFKLAAAYLTGRGAPKNDEEAARWFMLAAKQGHAESQSNIGLMYGRGRG 88
Query: 281 TEGEMMKAVVYLELATRAGETAADHVKNVIL 311
+AV + LA G+ AD + N+ +
Sbjct: 89 VPQSDEEAVKWYRLAAEQGD--ADGLFNLAV 117
>gi|224023873|ref|ZP_03642239.1| hypothetical protein BACCOPRO_00590 [Bacteroides coprophilus DSM
18228]
gi|224017095|gb|EEF75107.1| hypothetical protein BACCOPRO_00590 [Bacteroides coprophilus DSM
18228]
Length = 318
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 12/178 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W-EMDKKEAAISLYRQA 163
G + +G G R++ +A+D + A RG+ A + G +Y W + ++AA++ YR+A
Sbjct: 115 GFMYTYGLGTRQDFGEAMDWLYRAALRGNPKAQLGMGNLYKNGWGPVRNEQAALNWYRRA 174
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ N+G Y EEA+ +A+ G+ AQY + G+GVD
Sbjct: 175 AAHGNSDAMNNIGYMYRNGLGVPRNYEEALFWFQKAANLGNSSAQYNIGNLYCWGKGVDK 234
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
++ + ARW L++A A YN + Y +G+G+ + +A KW +RAA GH KA L
Sbjct: 235 DIVQGARWMLKSALQENAPAQYNLARMYQWGKGVEKNQEEAMKWYRRAAAQGHEKAML 292
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 71/169 (42%), Gaps = 24/169 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G G G +L +AL+ FL A + A +AG MY
Sbjct: 79 GDLLYRGEGGPADLPEALNLFLMAARQEHVDAQANAGFMY-------------------- 118
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ LG EA+ LY+A++ G+ +AQ + G G N Q A WY RA
Sbjct: 119 ----TYGLGTRQDFGEAMDWLYRAALRGNPKAQLGMGNLYKNGWGPVRNEQAALNWYRRA 174
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
A G AM N Y G G+P ++ +A W ++AA+ G+ AQ G
Sbjct: 175 AAHGNSDAMNNIGYMYRNGLGVPRNYEEALFWFQKAANLGNSSAQYNIG 223
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ+ L L+RG G +L EA +L AA +V A N Y++G G +A
Sbjct: 74 AQFLLGDLLYRGEGGPADLPEALNLFLMAARQEHVDAQANAGFMYTYGLGTRQDFGEAMD 133
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEG 283
W+ RAA G+ KAQL G L+ G
Sbjct: 134 WLYRAALRGNPKAQLGMG-NLYKNG 157
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 34/154 (22%)
Query: 80 QLRAASLVCKSWNDALRPLREAMVLLRWGKR----------------FKHGRGVRKNLDK 123
QL +L W P+R L W +R +++G GV +N ++
Sbjct: 147 QLGMGNLYKNGWG----PVRNEQAALNWYRRAAAHGNSDAMNNIGYMYRNGLGVPRNYEE 202
Query: 124 ALDSFLKGAARGSTLAMVDAGLMY-W----EMDKKEAAISLYRQAAVLGDPAGQFNL--- 175
AL F K A G++ A + G +Y W + D + A + + A PA Q+NL
Sbjct: 203 ALFWFQKAANLGNSSAQYNIGNLYCWGKGVDKDIVQGARWMLKSALQENAPA-QYNLARM 261
Query: 176 -----GISYLQEEAVKLLYQASIAGHVRAQYQLA 204
G+ QEEA+K +A+ GH +A LA
Sbjct: 262 YQWGKGVEKNQEEAMKWYRRAAAQGHEKAMLALA 295
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
EA+ L A+ HV AQ G G + EA W RAA G +A
Sbjct: 94 EALNLFLMAARQEHVDAQANAGFMYTYGLGTRQDFGEAMDWLYRAALRGNPKAQLGMGNL 153
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 298
Y G G + + A W +RAA G+ A G GL +A+ + + A
Sbjct: 154 YKNGWGPVRNEQAALNWYRRAAAHGNSDAMNNIGYMYRNGLGVPRNYEEALFWFQKAANL 213
Query: 299 GETAADH 305
G ++A +
Sbjct: 214 GNSSAQY 220
>gi|307609926|emb|CBW99453.1| hypothetical protein LPW_12271 [Legionella pneumophila 130b]
Length = 489
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 18/230 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++ G GV K+L KA+ + K A +G A + G++Y + + + A+ +++A
Sbjct: 51 GLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQQAMHWFKKA 110
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
+ G GQ N+GI Y VK + YQ A+ G+ QY LA+ G G+
Sbjct: 111 SEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPK 170
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
++++A WY++AAE G + A N + Y GE +P + A W RAA+ G AQ
Sbjct: 171 DIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 230
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ L+ G + KA+ + E A G A + I +Q T +D
Sbjct: 231 GV-LYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKD 279
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 117/232 (50%), Gaps = 19/232 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISLYRQAAVL 166
+ +G G+ K++ KA+ ++K A +G A + G++Y ++ +AAIS Y +AA
Sbjct: 162 YMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANE 221
Query: 167 GDPAGQFNLGISYLQ-----EEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q NLG+ Y+ ++ K +Y +A+ G +AQ L +G G + +++
Sbjct: 222 GSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMK 281
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G+ A N + YS +G +++A W K+AAD G +AQ GL
Sbjct: 282 KAIYWYEKAAENGFTLAQNNLGVLYS-NDGELQDYKKAYLWFKKAADQGFAEAQNNLGL- 339
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ +G + +AV++ + A G A H ++ + +D + +
Sbjct: 340 MYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKDNKLAI 391
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 267 GYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 326
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLHRGRGVDFN 216
G Q NLG+ Y++ + + Y ++ + RA Q+ LA+ +G G+ +
Sbjct: 327 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 386
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A +WY +AAE G A N ++ Y GEG+ + ++A W ++AA+ G AQ+ G
Sbjct: 387 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKIDFKKAMYWYQKAAEQGLDLAQINLG 446
Query: 277 L----GLFTEGEMMKAVVYLELATRAGETAADHVKN 308
+ G+ + KA ++ A +G A + N
Sbjct: 447 IMYLDGMGVNKDFAKAKYWIGKAKDSGSQDALTIWN 482
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 132 AARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-- 185
A +G A + GL Y + D + AI Y++AA G Q NLG+ YL+ E V
Sbjct: 39 AEQGDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQ 98
Query: 186 ------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+AS G Q + + G GV +L +A WY +AAEGG YN
Sbjct: 99 NSQQAMHWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNL 158
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
++ Y +G G+P ++A W +AA+ G AQ G+ L+ GE
Sbjct: 159 AVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGV-LYERGE 202
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +AQ++L L +G GV+ +L++A WY +AA+ G A N + Y GEG+P + +
Sbjct: 42 GDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQ 101
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
QA W K+A++ G Q G+ GL + ++ +A ++ + A G + + V+
Sbjct: 102 QAMHWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVM 161
Query: 311 LQQLSATSRD 320
+ +D
Sbjct: 162 YMYGNGIPKD 171
>gi|154250914|ref|YP_001411738.1| peptidoglycan-binding domain-containing protein [Parvibaculum
lavamentivorans DS-1]
gi|154154864|gb|ABS62081.1| Peptidoglycan-binding domain 1 protein [Parvibaculum
lavamentivorans DS-1]
Length = 1012
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 16/183 (8%)
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ A Q+ +G Y EA + +A+ AQY+LA +GRGV
Sbjct: 738 AARGGNAAAQYEVGQRYANGEGVTQDMSEAARWFERAANQDLTIAQYRLATQYEKGRGVP 797
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL- 273
+ +A WY +AA GG V+AM+N ++ ++ G G A +W +AAD G G +Q
Sbjct: 798 QDDAKARDWYEKAAAGGNVKAMHNLAVIHAEGRGTAQDFETASRWFTQAADFGLGDSQYN 857
Query: 274 -----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
E GLG+ E +++A +L++A + G+ A ++ I +LSA RA + +
Sbjct: 858 LAILNERGLGI--EKNLVEAYKWLDIAAKGGDKGAAAKRDAIATELSADDLARAKIASGT 915
Query: 329 WRA 331
WRA
Sbjct: 916 WRA 918
>gi|54297129|ref|YP_123498.1| hypothetical protein lpp1174 [Legionella pneumophila str. Paris]
gi|53750914|emb|CAH12325.1| hypothetical protein lpp1174 [Legionella pneumophila str. Paris]
Length = 490
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 18/230 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++ G GV K+L KA+ + K A +G A + G++Y + + + A+ +++A
Sbjct: 52 GLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQQAMYWFKKA 111
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
+ G GQ N+GI Y VK + YQ A+ G+ QY LA+ G G+
Sbjct: 112 SEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPK 171
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
++++A WY++AAE G + A N + Y GE +P + A W RAA+ G AQ
Sbjct: 172 DIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 231
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ L+ G + KA+ + E A G A + I +Q T +D
Sbjct: 232 GV-LYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKD 280
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 117/232 (50%), Gaps = 19/232 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISLYRQAAVL 166
+ +G G+ K++ KA+ ++K A +G A + G++Y ++ +AAIS Y +AA
Sbjct: 163 YMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANE 222
Query: 167 GDPAGQFNLGISYLQ-----EEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q NLG+ Y+ ++ K +Y +A+ G +AQ L +G G + +++
Sbjct: 223 GSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMK 282
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G+ A N + YS +G +++A W K+AAD G +AQ GL
Sbjct: 283 KAIYWYEKAAENGFTLAQNNLGVLYS-NDGELQDYKKAYLWFKKAADQGFAEAQNNLGL- 340
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ +G + +AV++ + A G A H ++ + +D + +
Sbjct: 341 MYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKDNKLAI 392
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 268 GYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 327
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLHRGRGVDFN 216
G Q NLG+ Y++ + + Y ++ + RA Q+ LA+ +G G+ +
Sbjct: 328 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 387
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A +WY +AAE G A N ++ Y GEG+ ++A W ++AA+ G AQ+ G
Sbjct: 388 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKRDFKKAMYWYQKAAEQGLDLAQINLG 447
Query: 277 L----GLFTEGEMMKAVVYLELATRAGETAADHVKN 308
+ G+ + KA ++ A +G A + N
Sbjct: 448 IMYLDGMGVNKDFAKAKYWIGKAKDSGSQDALTIWN 483
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 132 AARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-- 185
A +G A + GL Y + D + AI Y++AA G Q NLG+ YL+ E V
Sbjct: 40 AEQGDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQ 99
Query: 186 ---KLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+ +Y +AS G Q + + G GV +L +A WY +AAEGG YN
Sbjct: 100 NSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNL 159
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
++ Y +G G+P ++A W +AA+ G AQ G+ L+ GE
Sbjct: 160 AVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGV-LYERGE 203
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
KA+ + K AA+G A + G +Y E D K+A I Y +AA G Q NLG+
Sbjct: 247 KAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMKKA-IYWYEKAAENGFTLAQNNLGV 305
Query: 178 SY-----LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y LQ+ L+ +A+ G AQ L L +G G+ N EA WY RAAE
Sbjct: 306 LYSNDGELQDYKKAYLWFKKAADQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQ 365
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
G A +N ++ Y G G+ ++ A KW ++AA+ G AQ + ++ GE +K
Sbjct: 366 GLPLAQHNLAIMYMKGLGIKKDNKLAIKWYQKAAEKGLDLAQNNLAV-MYIRGEGVK 421
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +AQ++L L +G GV+ +L++A WY +AA+ G A N + Y GEG+P + +
Sbjct: 43 GDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQ 102
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
QA W K+A++ G Q G+ GL + ++ +A ++ + A G + + V+
Sbjct: 103 QAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVM 162
Query: 311 LQQLSATSRD 320
+ +D
Sbjct: 163 YMYGNGIPKD 172
>gi|52841406|ref|YP_095205.1| hypothetical protein lpg1172 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777082|ref|YP_005185519.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|52628517|gb|AAU27258.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364507896|gb|AEW51420.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
Length = 495
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 18/238 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
+A G +++ G GV K+L KA+ + K A +G A + G++Y + + +
Sbjct: 48 DAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQQ 107
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCL 207
A+ +++A+ G GQ N+GI Y VK + YQ A+ G+ QY LA+
Sbjct: 108 AMYWFKKASEQGLAIGQNNIGILYENGLGVKKDPGQAFIWYQKAAEGGNSDGQYNLAVMY 167
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G+ ++++A WY++AAE G + A N + Y GE +P + A W RAA+ G
Sbjct: 168 MYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEG 227
Query: 268 HGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
AQ G+ L+ G + KA+ + E A G A + I +Q T +D
Sbjct: 228 SLIAQTNLGV-LYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKD 284
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 117/232 (50%), Gaps = 19/232 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISLYRQAAVL 166
+ +G G+ K++ KA+ ++K A +G A + G++Y ++ +AAIS Y +AA
Sbjct: 167 YMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANE 226
Query: 167 GDPAGQFNLGISYLQ-----EEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q NLG+ Y+ ++ K +Y +A+ G +AQ L +G G + +++
Sbjct: 227 GSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMK 286
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G+ A N + YS +G +++A W K+AAD G +AQ GL
Sbjct: 287 KAIYWYEKAAENGFTLAQNNLGVLYS-NDGELQDYKKAYLWFKKAADQGFAEAQNNLGL- 344
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ +G + +AV++ + A G A H ++ + +D + +
Sbjct: 345 MYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKDNKLAI 396
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 272 GYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 331
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLHRGRGVDFN 216
G Q NLG+ Y++ + + Y ++ + RA Q+ LA+ +G G+ +
Sbjct: 332 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 391
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A +WY +AAE G A N ++ Y GEG+ ++A W ++AA+ G AQ+ G
Sbjct: 392 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKRDFKKAMYWYQKAAEQGLDLAQINLG 451
Query: 277 L----GLFTEGEMMKAVVYLELATRAGETAADHVKN 308
+ G+ + KA ++ A +G A + N
Sbjct: 452 IMYLDGMGVNKDFAKAKYWIGKAKDSGSQDALTIWN 487
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
KA+ + K AA+G A + G +Y E D K+A I Y +AA G Q NLG+
Sbjct: 251 KAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMKKA-IYWYEKAAENGFTLAQNNLGV 309
Query: 178 SY-----LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y LQ+ L+ +A+ G AQ L L +G G+ N EA WY RAAE
Sbjct: 310 LYSNDGELQDYKKAYLWFKKAADQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQ 369
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
G A +N ++ Y G G+ ++ A KW ++AA+ G AQ + ++ GE +K
Sbjct: 370 GLPLAQHNLAIMYMKGLGIKKDNKLAIKWYQKAAEKGLDLAQNNLAV-MYIRGEGVK 425
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +AQ++L L +G GV+ +L++A WY +AA+ G A N + Y GEG+P + +
Sbjct: 47 GDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQ 106
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
QA W K+A++ G Q G+ GL + + +A ++ + A G + + V+
Sbjct: 107 QAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDPGQAFIWYQKAAEGGNSDGQYNLAVM 166
Query: 311 LQQLSATSRD 320
+ +D
Sbjct: 167 YMYGNGIPKD 176
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 167 GDPAGQFNLGISYLQEEAV-----KLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD QF LG+ Y + + V K +Y +A+ G AQ L + +G GV N Q
Sbjct: 47 GDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQ 106
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-L 277
+A W+ +A+E G N + Y G G+ QA W ++AA+ G+ Q +
Sbjct: 107 QAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDPGQAFIWYQKAAEGGNSDGQYNLAVM 166
Query: 278 GLFTEG---EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
++ G ++ KA+ + A G+ A + V+ ++ RD
Sbjct: 167 YMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRD 212
>gi|163796472|ref|ZP_02190432.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
gi|159178322|gb|EDP62866.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
Length = 829
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 8/121 (6%)
Query: 160 YRQAAVLGDPAGQFNLGISY------LQEEAVKLLYQASIA--GHVRAQYQLALCLHRGR 211
+R++A+ G P Q+NLG+ Y Q++ LL+ S A GH AQY L + GR
Sbjct: 623 FRESAIQGVPNAQYNLGVLYERGLGLPQDDTRALLWYHSAAEQGHPLAQYNLGVLYSAGR 682
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
G+ + E+ARW+ RAAE G A YN ++ G GL +A +W++RAA+ GH +A
Sbjct: 683 GIPLSYTESARWFRRAAERGVPAAAYNLAVLTESGLGLTRDAAEAERWLRRAAELGHSEA 742
Query: 272 Q 272
+
Sbjct: 743 K 743
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ Q+AA W+ +A G A YN + Y G GLP +A W AA+ GH AQ
Sbjct: 615 DFQQAANWFRESAIQGVPNAQYNLGVLYERGLGLPQDDTRALLWYHSAAEQGHPLAQYNL 674
Query: 276 GLGLFTEG 283
G+ L++ G
Sbjct: 675 GV-LYSAG 681
>gi|397663642|ref|YP_006505180.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|397666839|ref|YP_006508376.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395127053|emb|CCD05238.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395130250|emb|CCD08488.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
Length = 489
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 18/230 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++ G GV K+L KA+ + K A +G A + G++Y + + + A+ +++A
Sbjct: 51 GLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQQAMYWFKKA 110
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
+ G GQ N+GI Y VK + YQ A+ G+ QY LA+ G G+
Sbjct: 111 SEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPK 170
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
++++A WY++AAE G + A N + Y GE +P + A W RAA+ G AQ
Sbjct: 171 DIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 230
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ L+ G + KA+ + E A G A + I +Q T +D
Sbjct: 231 GV-LYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKD 279
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 117/232 (50%), Gaps = 19/232 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISLYRQAAVL 166
+ +G G+ K++ KA+ ++K A +G A + G++Y ++ +AAIS Y +AA
Sbjct: 162 YMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANE 221
Query: 167 GDPAGQFNLGISYLQ-----EEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q NLG+ Y+ ++ K +Y +A+ G +AQ L +G G + +++
Sbjct: 222 GSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMK 281
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G+ A N + YS +G +++A W K+AAD G +AQ GL
Sbjct: 282 KAIYWYEKAAENGFTLAQNNLGVLYS-NDGELQDYKKAYLWFKKAADQGFAEAQNNLGL- 339
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ +G + +AV++ + A G A H ++ + +D + +
Sbjct: 340 MYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKDNKLAI 391
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 267 GYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 326
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLHRGRGVDFN 216
G Q NLG+ Y++ + + Y ++ + RA Q+ LA+ +G G+ +
Sbjct: 327 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 386
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A +WY +AAE G A N ++ Y GEG+ ++A W ++AA+ G AQ+ G
Sbjct: 387 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKRDFKKAMYWYQKAAEQGLDLAQINLG 446
Query: 277 L----GLFTEGEMMKAVVYLELATRAGETAADHVKN 308
+ G+ + KA ++ A +G A + N
Sbjct: 447 IMYLDGMGVNKDFAKAKYWIGKAKDSGSQDALTIWN 482
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 132 AARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-- 185
A +G A + GL Y + D + AI Y++AA G Q NLG+ YL+ E V
Sbjct: 39 AEQGDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQ 98
Query: 186 ---KLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+ +Y +AS G Q + + G GV +L +A WY +AAEGG YN
Sbjct: 99 NSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNL 158
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
++ Y +G G+P ++A W +AA+ G AQ G+ L+ GE
Sbjct: 159 AVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGV-LYERGE 202
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
KA+ + K AA+G A + G +Y E D K+A I Y +AA G Q NLG+
Sbjct: 246 KAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMKKA-IYWYEKAAENGFTLAQNNLGV 304
Query: 178 SY-----LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y LQ+ L+ +A+ G AQ L L +G G+ N EA WY RAAE
Sbjct: 305 LYSNDGELQDYKKAYLWFKKAADQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQ 364
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
G A +N ++ Y G G+ ++ A KW ++AA+ G AQ + ++ GE +K
Sbjct: 365 GLPLAQHNLAIMYMKGLGIKKDNKLAIKWYQKAAEKGLDLAQNNLAV-MYIRGEGVK 420
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +AQ++L L +G GV+ +L++A WY +AA+ G A N + Y GEG+P + +
Sbjct: 42 GDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQ 101
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
QA W K+A++ G Q G+ GL + ++ +A ++ + A G + + V+
Sbjct: 102 QAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVM 161
Query: 311 LQQLSATSRD 320
+ +D
Sbjct: 162 YMYGNGIPKD 171
>gi|431839185|gb|ELK01112.1| Protein sel-1 like protein 1 [Pteropus alecto]
Length = 794
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHNAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|255068260|ref|ZP_05320115.1| TPR repeat protein [Neisseria sicca ATCC 29256]
gi|255047452|gb|EET42916.1| TPR repeat protein [Neisseria sicca ATCC 29256]
Length = 376
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 113/251 (45%), Gaps = 54/251 (21%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+G+R++ +A+ + K A +G A + G+MY E A+ YR+A
Sbjct: 45 GVMYEQGKGIRQDYTEAVQWYRKAAEQGQAEAQYNLGVMYAEGQGVRQGDAEAVKWYRKA 104
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQ--------------- 200
A LG Q+NL + Y + EAV+ +A+ G+ AQ
Sbjct: 105 AELGLAEAQYNLAVMYTEGRGVRQDYVEAVRWYRKAADQGYAEAQNNLGAMYKDGKGIRQ 164
Query: 201 ---------------------YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
Y L L + GRGV + ++A +WY +AAE GY A N
Sbjct: 165 DDNQAVQWFRKAVEQGVDAAQYNLGLMYYEGRGVRQDYKQALQWYRKAAEQGYKDAQNNL 224
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLEL 294
+ Y G+G+ + QA KW ++AA+ G+ +AQ G G++ EG+ ++ AV +
Sbjct: 225 GVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYNLG-GMYVEGQGVRQDDAQAVQWFRR 283
Query: 295 ATRAGETAADH 305
A G+ A +
Sbjct: 284 AVEQGDANAQY 294
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGIS 178
A L+ A G A G+MY + D EA + YR+AA G Q+NLG+
Sbjct: 25 AQKEMLRMAEAGDAGAQFSLGVMYEQGKGIRQDYTEA-VQWYRKAAEQGQAEAQYNLGVM 83
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y + EAVK +A+ G AQY LA+ GRGV + EA RWY +AA+
Sbjct: 84 YAEGQGVRQGDAEAVKWYRKAAELGLAEAQYNLAVMYTEGRGVRQDYVEAVRWYRKAADQ 143
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
GY A N Y G+G+ QA +W ++A + G AQ GL ++ EG
Sbjct: 144 GYAEAQNNLGAMYKDGKGIRQDDNQAVQWFRKAVEQGVDAAQYNLGL-MYYEG 195
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 17/187 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK------EAAISLYRQAA 164
+ GRGVR++ +A+ + K A +G A + G MY D K A+ +R+A
Sbjct: 120 YTEGRGVRQDYVEAVRWYRKAADQGYAEAQNNLGAMY--KDGKGIRQDDNQAVQWFRKAV 177
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFN 216
G A Q+NLG+ Y + V+ Y+ A+ G+ AQ L + G+GV +
Sbjct: 178 EQGVDAAQYNLGLMYYEGRGVRQDYKQALQWYRKAAEQGYKDAQNNLGVMYKDGKGVRKD 237
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+A +WY +AAE G A YN Y G+G+ QA +W +RA + G AQ G
Sbjct: 238 YVQAVKWYRKAAEQGNAEAQYNLGGMYVEGQGVRQDDAQAVQWFRRAVEQGDANAQYSLG 297
Query: 277 LGLFTEG 283
L ++ +G
Sbjct: 298 L-MYAKG 303
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 93/184 (50%), Gaps = 16/184 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +K G+G+R++ ++A+ F K +G A + GLMY+E D K+A + YR+
Sbjct: 153 GAMYKDGKGIRQDDNQAVQWFRKAVEQGVDAAQYNLGLMYYEGRGVRQDYKQA-LQWYRK 211
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG+ Y +AVK +A+ G+ AQY L G+GV
Sbjct: 212 AAEQGYKDAQNNLGVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYNLGGMYVEGQGVR 271
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A +W+ RA E G A Y+ L Y+ G G+ + Q + +AA HG A+ +
Sbjct: 272 QDDAQAVQWFRRAVEQGDANAQYSLGLMYAKGLGVRQDYVQTLQLWHKAAR--HGVAEAQ 329
Query: 275 HGLG 278
GLG
Sbjct: 330 SGLG 333
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E A K + + + AG AQ+ L + +G+G+ + EA +WY +AAE G A YN +
Sbjct: 23 EVAQKEMLRMAEAGDAGAQFSLGVMYEQGKGIRQDYTEAVQWYRKAAEQGQAEAQYNLGV 82
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGET 301
Y+ G+G+ +A KW ++AA+ G +AQ + ++TEG ++ Y+E A R
Sbjct: 83 MYAEGQGVRQGDAEAVKWYRKAAELGLAEAQYNLAV-MYTEGRGVRQ-DYVE-AVRWYRK 139
Query: 302 AADHVKNVILQQLSATSRD 320
AAD L A +D
Sbjct: 140 AADQGYAEAQNNLGAMYKD 158
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G +K G+GVRK+ +A+ + K A +G+ A + G MY E + + +A A+ +R+A
Sbjct: 225 GVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYNLGGMYVEGQGVRQDDAQAVQWFRRA 284
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
GD Q++LG+ Y + + ++L ++A+ G AQ L + GRGV
Sbjct: 285 VEQGDANAQYSLGLMYAKGLGVRQDYVQTLQLWHKAARHGVAEAQSGLGWMYYTGRGVRQ 344
Query: 216 NLQEAARWYLRAAEGGY 232
N A WY +A + G+
Sbjct: 345 NSVIAKEWYKKACDNGF 361
>gi|406660037|ref|ZP_11068172.1| Putative beta-lactamase hcpC precursor [Cecembia lonarensis LW9]
gi|405556171|gb|EKB51121.1| Putative beta-lactamase hcpC precursor [Cecembia lonarensis LW9]
Length = 445
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 101/190 (53%), Gaps = 15/190 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAAR-GSTLAMVDAGLMYWEMD----KKEAAISLYRQAAV 165
++ G GV+K++ K + S LK AA+ G+ A ++ G + + + LYR AA
Sbjct: 191 YQDGNGVQKDVQKGI-SLLKEAAQAGNPQAQLNLGFAFHYGNGVQKNYQETERLYRLAAD 249
Query: 166 LGDPAGQFNLGISY-----LQE---EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G PA +FN+GI Y +Q+ EA +A+ G A++++ L + G GV +
Sbjct: 250 QGHPAAEFNMGILYRDGLSVQQNFAEAYNWFERAAKKGFANAEFEIGLLYYNGTGVKKDD 309
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
EA +WYL+AAE Y A + + Y+ G G+ +A KW ++AA+ G+ AQL G+
Sbjct: 310 TEAVKWYLKAAEQEYTLAERSLGIMYANGYGVKKDDTEAVKWYRKAANKGNATAQLNLGI 369
Query: 278 GLFTEGEMMK 287
++ G +K
Sbjct: 370 -MYANGRGVK 378
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G V++N +A + F + A +G A + GL+Y+ + D EA + Y +
Sbjct: 260 GILYRDGLSVQQNFAEAYNWFERAAKKGFANAEFEIGLLYYNGTGVKKDDTEA-VKWYLK 318
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA + +LGI Y EAVK +A+ G+ AQ L + GRGV
Sbjct: 319 AAEQEYTLAERSLGIMYANGYGVKKDDTEAVKWYRKAANKGNATAQLNLGIMYANGRGVK 378
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ EA +WY +AA+ G A N + Y+ G G+ + +A W K+AA G+ A+
Sbjct: 379 RDYTEAVKWYRKAADQGNASAQNNLGVMYARGTGVNKNENEAINWFKKAAAQGNVNAK 436
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
L G F +G GV+KN + + A +G A + G++Y + A + +
Sbjct: 221 LNLGFAFHYGNGVQKNYQETERLYRLAADQGHPAAEFNMGILYRDGLSVQQNFAEAYNWF 280
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+AA G +F +G+ Y EAVK +A+ + A+ L + G G
Sbjct: 281 ERAAKKGFANAEFEIGLLYYNGTGVKKDDTEAVKWYLKAAEQEYTLAERSLGIMYANGYG 340
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + EA +WY +AA G A N + Y+ G G+ + +A KW ++AAD G+ AQ
Sbjct: 341 VKKDDTEAVKWYRKAANKGNATAQLNLGIMYANGRGVKRDYTEAVKWYRKAADQGNASAQ 400
Query: 273 LEHGL 277
G+
Sbjct: 401 NNLGV 405
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 23/218 (10%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLM-YW-----EMDKKEAAISLYRQAAVLGDPAGQFNLG 176
+A+ SF A A G M YW +D+ +A L+ +A LGD NLG
Sbjct: 94 EAMASFQVAANLNLAEAYTMLGFMHYWGHGLDAIDRTKAG-ELFEKAVSLGDDKA--NLG 150
Query: 177 ISYLQEEAVK---LLYQASIAGHVRAQ-------YQLALCLHRGRGVDFNLQEAARWYLR 226
++ ++ V L +AS A RA+ +LA G GV ++Q+
Sbjct: 151 LASSEKNPVNKEDLYRRASKAIIQRAEEKEPFWKVRLAGLYQDGNGVQKDVQKGISLLKE 210
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTE 282
AA+ G +A N + +G G+ ++++ + + AAD GH A+ G+ GL +
Sbjct: 211 AAQAGNPQAQLNLGFAFHYGNGVQKNYQETERLYRLAADQGHPAAEFNMGILYRDGLSVQ 270
Query: 283 GEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+A + E A + G A+ ++ + +D
Sbjct: 271 QNFAEAYNWFERAAKKGFANAEFEIGLLYYNGTGVKKD 308
>gi|354477644|ref|XP_003501029.1| PREDICTED: protein sel-1 homolog 1 isoform 1 [Cricetulus griseus]
gi|344249723|gb|EGW05827.1| Protein sel-1-like 1 [Cricetulus griseus]
Length = 794
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AVV YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVVQYLLLAEQGYEVAQSN-SAFILDQKEAT 603
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|338708147|ref|YP_004662348.1| Sel1 domain-containing protein [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336294951|gb|AEI38058.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
Length = 611
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 12/225 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQA 163
G + G G KN +KA + K A +G A + G MY+ E K +LY ++A
Sbjct: 190 GYMYNKGEGTPKNSEKAFYWYQKAADKGIPEAQSNLGNMYFIGEGTPKNPEKALYWLKKA 249
Query: 164 AVLGDPAGQFNLGISYL----QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
A G+ + LG Y+ ++EAV +A+ G A + LAL + GRGV N ++
Sbjct: 250 ADQGNIIATYLLGKQYMAISNEKEAVHWYQKAADKGLASAAFYLALMYNNGRGVAQNPEK 309
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG--- 276
A WY +AA+ A +N L Y+ G +P ++A W ++AA+ G+ AQ+ G
Sbjct: 310 AFYWYQKAADHNIPEAEFNLGLMYNLGRAVPKDLKKAYFWYQKAAEHGYVSAQVNVGLQY 369
Query: 277 -LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
LG+ T + KA + + A G A+ + Q T +D
Sbjct: 370 LLGIETNRNLEKAFYWYQKAADQGNEDAETRFGYMYQLGYGTPKD 414
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G KN +KAL K A +G+ +A G Y + ++ A+ Y++AA G
Sbjct: 226 GNMYFIGEGTPKNPEKALYWLKKAADQGNIIATYLLGKQYMAISNEKEAVHWYQKAADKG 285
Query: 168 DPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+ F L G++ E+A +A+ A++ L L + GR V +L++
Sbjct: 286 LASAAFYLALMYNNGRGVAQNPEKAFYWYQKAADHNIPEAEFNLGLMYNLGRAVPKDLKK 345
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG--- 276
A WY +AAE GYV A N L Y G + +A W ++AAD G+ A+ G
Sbjct: 346 AYFWYQKAAEHGYVSAQVNVGLQYLLGIETNRNLEKAFYWYQKAADQGNEDAETRFGYMY 405
Query: 277 -LGLFTEGEMMKAVVYLELA 295
LG T ++ KA + + A
Sbjct: 406 QLGYGTPKDLEKAKYWYQKA 425
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+GV KN K+ K A +G A D L+Y E E A ++A
Sbjct: 82 GLMYDRGKGVAKNEKKSFYWMQKAADQGIAAAQFDMSLIYQEGIIFPKNPEKAFEWCQKA 141
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G P + LG Y E+A +A+ + A+ L ++G G
Sbjct: 142 ADQGYPNAEAVLGDMYYDGEGTPKNSEKAFYWYQKAADQDYPDAKVSLGYMYNKGEGTPK 201
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
N ++A WY +AA+ G A N Y GEG P + +A W+K+AAD G+
Sbjct: 202 NSEKAFYWYQKAADKGIPEAQSNLGNMYFIGEGTPKNPEKALYWLKKAADQGN 254
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 86/187 (45%), Gaps = 15/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G ++ G +NL+KA + K A +G+ A G MY + K E A Y++A
Sbjct: 366 GLQYLLGIETNRNLEKAFYWYQKAADQGNEDAETRFGYMYQLGYGTPKDLEKAKYWYQKA 425
Query: 164 AVLGDPAGQFNLGISYLQE---------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A +G++ LG EA+K + QA+ G+ A+ L RG GV
Sbjct: 426 ADQDYASGKYALGQLIYDTGKTNPKNLAEAIKWIKQAAYQGNEAAECFLGALYERGEGVP 485
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
NL++A W R+A+ G A N L Y GEG+P + QA W K++A+ A
Sbjct: 486 KNLEQAIYWLQRSAQQGNALAACNLGLIYYQGEGVPKNLEQAAYWFKKSAEQNFAGADF- 544
Query: 275 HGLGLFT 281
LG+ T
Sbjct: 545 -CLGMMT 550
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 172 QFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
QF+L + Y + E+A + + +A+ GH AQ+QL L RG+GV N +++ W
Sbjct: 42 QFHLAMHYKKNDDNKQDLEKAFRWMEEAADQGHAEAQHQLGLMYDRGKGVAKNEKKSFYW 101
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
+AA+ G A ++ SL Y G P + +A +W ++AAD G+ A+ G ++ +G
Sbjct: 102 MQKAADQGIAAAQFDMSLIYQEGIIFPKNPEKAFEWCQKAADQGYPNAEAVLG-DMYYDG 160
Query: 284 E 284
E
Sbjct: 161 E 161
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLY--RQ 162
+K +++L+KA + A +G A GLMY D+ K S Y ++
Sbjct: 48 HYKKNDDNKQDLEKAFRWMEEAADQGHAEAQHQLGLMY---DRGKGVAKNEKKSFYWMQK 104
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G A QF++ + Y + E+A + +A+ G+ A+ L + G G
Sbjct: 105 AADQGIAAAQFDMSLIYQEGIIFPKNPEKAFEWCQKAADQGYPNAEAVLGDMYYDGEGTP 164
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N ++A WY +AA+ Y A + Y+ GEG P + +A W ++AAD G +AQ
Sbjct: 165 KNSEKAFYWYQKAADQDYPDAKVSLGYMYNKGEGTPKNSEKAFYWYQKAADKGIPEAQSN 224
Query: 275 HG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
G +G T KA+ +L+ A G A + ++ +Q A S ++
Sbjct: 225 LGNMYFIGEGTPKNPEKALYWLKKAADQGNIIATY---LLGKQYMAISNEK 272
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 84/190 (44%), Gaps = 14/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK-EAAISLYRQA 163
G + GR V K+L KA + K A G A V+ GL Y E ++ E A Y++A
Sbjct: 330 GLMYNLGRAVPKDLKKAYFWYQKAAEHGYVSAQVNVGLQYLLGIETNRNLEKAFYWYQKA 389
Query: 164 AVLGDPAGQFNLGISYL-------QEEAVKLLYQ-ASIAGHVRAQYQLA-LCLHRGRGVD 214
A G+ + G Y E K YQ A+ + +Y L L G+
Sbjct: 390 ADQGNEDAETRFGYMYQLGYGTPKDLEKAKYWYQKAADQDYASGKYALGQLIYDTGKTNP 449
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
NL EA +W +AA G A Y GEG+P + QA W++R+A G+ A
Sbjct: 450 KNLAEAIKWIKQAAYQGNEAAECFLGALYERGEGVPKNLEQAIYWLQRSAQQGNALAACN 509
Query: 275 HGLGLFTEGE 284
GL ++ +GE
Sbjct: 510 LGL-IYYQGE 518
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLY 160
R+G ++ G G K+L+KA + K A + G + ++ K AI
Sbjct: 400 RFGYMYQLGYGTPKDLEKAKYWYQKAADQDYASGKYALGQLIYDTGKTNPKNLAEAIKWI 459
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+QAA G+ A + LG Y + E+A+ L +++ G+ A L L ++G G
Sbjct: 460 KQAAYQGNEAAECFLGALYERGEGVPKNLEQAIYWLQRSAQQGNALAACNLGLIYYQGEG 519
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE--GLPLSHRQARKWMKRA 263
V NL++AA W+ ++AE + A + + + + P + ++ +W ++A
Sbjct: 520 VPKNLEQAAYWFKKSAEQNFAGADFCLGMMTAHDDIPSYPHTMDESLRWYQKA 572
>gi|148358759|ref|YP_001249966.1| TPR repeat-containing protein [Legionella pneumophila str. Corby]
gi|296106804|ref|YP_003618504.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
gi|148280532|gb|ABQ54620.1| TPR repeat protein [Legionella pneumophila str. Corby]
gi|295648705|gb|ADG24552.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
Length = 489
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 18/230 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++ G GV K+L KA+ + K A +G A + G++Y + + + A+ +++A
Sbjct: 51 GLQYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQQAMYWFKKA 110
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
+ G GQ N+GI Y VK + YQ A+ G+ QY LA+ G G+
Sbjct: 111 SEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPK 170
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
++++A WY++AAE G + A N + Y GE +P + A W RAA+ G AQ
Sbjct: 171 DIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 230
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G+ L+ G + KA+ + E A G A + I +Q T +D
Sbjct: 231 GV-LYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKD 279
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 117/232 (50%), Gaps = 19/232 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISLYRQAAVL 166
+ +G G+ K++ KA+ ++K A +G A + G++Y ++ +AAIS Y +AA
Sbjct: 162 YMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANE 221
Query: 167 GDPAGQFNLGISYLQ-----EEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q NLG+ Y+ ++ K +Y +A+ G +AQ L +G G + +++
Sbjct: 222 GSLIAQTNLGVLYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMK 281
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G+ A N + YS +G +++A W K+AAD G +AQ GL
Sbjct: 282 KAIYWYEKAAENGFTLAQNNLGVLYS-NDGELQDYKKAYLWFKKAADQGFAEAQNNLGL- 339
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ +G + +AV++ + A G A H ++ + +D + +
Sbjct: 340 MYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKDNKLAI 391
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 15/211 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 267 GYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 326
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLHRGRGVDFN 216
G Q NLG+ Y++ + + Y ++ + RA Q+ LA+ +G G+ +
Sbjct: 327 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 386
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A +WY +AAE G A N ++ Y GEG+ ++A W ++AA+ G AQ+ G
Sbjct: 387 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKRDFKKAMYWYQKAAEQGLDLAQINLG 446
Query: 277 L----GLFTEGEMMKAVVYLELATRAGETAA 303
+ G+ + KA ++ A +G A
Sbjct: 447 IMYLDGMGVNKDFAKAKYWIGKAKDSGSQDA 477
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 132 AARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-- 185
A +G A + GL Y + D + AI Y++AA G Q NLG+ YL+ E V
Sbjct: 39 AEQGDAQAQFELGLQYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQ 98
Query: 186 ---KLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+ +Y +AS G Q + + G GV +L +A WY +AAEGG YN
Sbjct: 99 NSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNL 158
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
++ Y +G G+P ++A W +AA+ G AQ G+ L+ GE
Sbjct: 159 AVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGV-LYERGE 202
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
KA+ + K AA+G A + G +Y E D K+A I Y +AA G Q NLG+
Sbjct: 246 KAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMKKA-IYWYEKAAENGFTLAQNNLGV 304
Query: 178 SY-----LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y LQ+ L+ +A+ G AQ L L +G G+ N EA WY RAAE
Sbjct: 305 LYSNDGELQDYKKAYLWFKKAADQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQ 364
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
G A +N ++ Y G G+ ++ A KW ++AA+ G AQ + ++ GE +K
Sbjct: 365 GLPLAQHNLAIMYMKGLGIKKDNKLAIKWYQKAAEKGLDLAQNNLAV-MYIRGEGVK 420
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +AQ++L L +G GV+ +L++A WY +AA+ G A N + Y GEG+P + +
Sbjct: 42 GDAQAQFELGLQYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQ 101
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
QA W K+A++ G Q G+ GL + ++ +A ++ + A G + + V+
Sbjct: 102 QAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVM 161
Query: 311 LQQLSATSRD 320
+ +D
Sbjct: 162 YMYGNGIPKD 171
>gi|348573207|ref|XP_003472383.1| PREDICTED: protein sel-1 homolog 1-like [Cavia porcellus]
Length = 798
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 386 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 445
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 446 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 505
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 506 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMSAYNSY 565
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 566 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 602
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 31/229 (13%)
Query: 76 FTLPQ-LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR 134
+ LPQ ++AA + + + P + + G + G GV + KAL + GA
Sbjct: 232 YYLPQNIQAAKEMFEKLTEEGSPKGQTAL----GFLYASGLGVNSSQAKALVYYTFGALG 287
Query: 135 GSTLAMVDAGLMYWE----MDKKEAAISLYRQAAV------------------LGDPAGQ 172
G+ +A + G YW + E+A++ YR A L D
Sbjct: 288 GNLIAHMVLGYRYWAGIGVLQSCESALTHYRLVANHVASDISLTGGSVVQRIRLPDEVEN 347
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGG 231
+ L+E+ ++ + G V+AQ L L LH GRGV+ N Q A ++ AA G
Sbjct: 348 PGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAG 407
Query: 232 YVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
AM YS G + P S+ A + K+AAD G+ Q GLG+
Sbjct: 408 NSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQ--SGLGM 454
>gi|426377678|ref|XP_004055587.1| PREDICTED: protein sel-1 homolog 1 [Gorilla gorilla gorilla]
Length = 794
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|332842879|ref|XP_510102.3| PREDICTED: protein sel-1 homolog 1 [Pan troglodytes]
gi|397475013|ref|XP_003808949.1| PREDICTED: protein sel-1 homolog 1 [Pan paniscus]
gi|410214600|gb|JAA04519.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410214602|gb|JAA04520.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410255208|gb|JAA15571.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410255210|gb|JAA15572.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410299030|gb|JAA28115.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410355707|gb|JAA44457.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410355709|gb|JAA44458.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
Length = 794
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|333913037|ref|YP_004486769.1| Sel1 domain-containing protein repeat-containing protein [Delftia
sp. Cs1-4]
gi|333743237|gb|AEF88414.1| Sel1 domain protein repeat-containing protein [Delftia sp. Cs1-4]
Length = 420
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 12/177 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +GRGV ++ +A+ + K A +G +A + GLM E A+ ++++
Sbjct: 178 GLMYANGRGVARDDAQAVQWYRKAAEQGDAVAQNNLGLMLAEGRGAAKDPAQAVQWFQRS 237
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ AGQ++LG+ Y +A++ A+ GH AQ+ + G VD
Sbjct: 238 AEQGEAAGQYSLGVMYATGRGVAEDVAQALRWFVAAAGQGHADAQFNAGMLYAEGGVVDR 297
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
++ +AA W +AAE G A N + Y+ G+G+P S QA +W++RAA G AQ
Sbjct: 298 DMAQAAHWLEKAAEQGNAAAQSNLGVLYANGQGVPASDEQAARWLERAAQQGDALAQ 354
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA- 155
EA G +K G+GV + + A + + A +G A D GLMY + + +A
Sbjct: 134 EASAQYALGSLYKRGQGVALSAETAAQWYERSAQQGYAPAQSDLGLMYANGRGVARDDAQ 193
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ YR+AA GD Q NLG+ + +AV+ +++ G QY L +
Sbjct: 194 AVQWYRKAAEQGDAVAQNNLGLMLAEGRGAAKDPAQAVQWFQRSAEQGEAAGQYSLGVMY 253
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV ++ +A RW++ AA G+ A +N + Y+ G + QA W+++AA+ G
Sbjct: 254 ATGRGVAEDVAQALRWFVAAAGQGHADAQFNAGMLYAEGGVVDRDMAQAAHWLEKAAEQG 313
Query: 268 HGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGET 301
+ AQ G+ L+ G+ + +A +LE A + G+
Sbjct: 314 NAAAQSNLGV-LYANGQGVPASDEQAARWLERAAQQGDA 351
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V L+Q + G AQY L RG+GV + + AA+WY R+A+ GY A + L Y+
Sbjct: 123 VAALHQHAEQGEASAQYALGSLYKRGQGVALSAETAAQWYERSAQQGYAPAQSDLGLMYA 182
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAG 299
G G+ QA +W ++AA+ G AQ GL + EG + +AV + + + G
Sbjct: 183 NGRGVARDDAQAVQWYRKAAEQGDAVAQNNLGL-MLAEGRGAAKDPAQAVQWFQRSAEQG 241
Query: 300 ETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
E A + V+ AT R A V + R
Sbjct: 242 EAAGQYSLGVMY----ATGRGVAEDVAQALR 268
>gi|62511130|sp|Q9ESM7.1|SE1L1_MESAU RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
gi|9967440|dbj|BAB12403.1| SEL1L [Mesocricetus auratus]
Length = 794
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL +++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AVV YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 83/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+ ++ YR
Sbjct: 262 GFLYVSGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESVLTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|449119237|ref|ZP_21755633.1| polymorphic outer membrane protein [Treponema denticola H1-T]
gi|449121627|ref|ZP_21757973.1| polymorphic outer membrane protein [Treponema denticola MYR-T]
gi|448949068|gb|EMB29893.1| polymorphic outer membrane protein [Treponema denticola MYR-T]
gi|448950227|gb|EMB31049.1| polymorphic outer membrane protein [Treponema denticola H1-T]
Length = 721
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 102/244 (41%), Gaps = 50/244 (20%)
Query: 77 TLPQLRAASLVCKSWN----DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGA 132
TLPQ ++ DA EA LL GKR+ G GV K+ KA + F KGA
Sbjct: 52 TLPQNEKPEETISEFDKLKLDAEGGNSEAQYLL--GKRYSDGDGVEKDYKKAFEWFKKGA 109
Query: 133 ARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDPAGQFNLGISYLQ------- 181
+G+ A G+ Y E AI LY++A G+ Q NLG+ Y
Sbjct: 110 DQGNANAQNALGVCYDNGQGVEKNYTIAIDLYKKAIEQGNAKAQNNLGVMYYNGHGVDKS 169
Query: 182 -EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY-------- 232
E+A +L +A+ G+ AQ L G GV+ N EA +WY +AA+ G
Sbjct: 170 YEKAFELYKKAAEQGNAYAQNNLGYMYENGEGVEKNTSEAIKWYTKAADQGVANAQDSLG 229
Query: 233 ----VRAMYNTSLC--------------------YSFGEGLPLSHRQARKWMKRAADCGH 268
VR YN + Y G G+ ++QA +W ++A+ GH
Sbjct: 230 WICEVREEYNKAAAMYLMAAQQGHANGQNNLGRMYYNGYGVDKDYKQALEWYTKSAEQGH 289
Query: 269 GKAQ 272
AQ
Sbjct: 290 AYAQ 293
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G GV KN +A+ + K A +G A G + ++ A ++Y AA G
Sbjct: 193 GYMYENGEGVEKNTSEAIKWYTKAADQGVANAQDSLGWICEVREEYNKAAAMYLMAAQQG 252
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQE 219
GQ NLG Y V Y+ ++ GH AQ L + G GVD N ++
Sbjct: 253 HANGQNNLGRMYYNGYGVDKDYKQALEWYTKSAEQGHAYAQNNLGYMYYNGYGVDKNYKQ 312
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A WY ++AE G+ A Y+ Y G+G ++A +W ++A+ GH AQ G +
Sbjct: 313 ALEWYTKSAEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWYTKSAEQGHAYAQNNLGY-M 371
Query: 280 FTEGEMMK 287
+ G+ +K
Sbjct: 372 YENGKGVK 379
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVLGDPAGQ 172
VR+ +KA +L A +G + G MY+ +DK + A+ Y ++A G Q
Sbjct: 234 VREEYNKAAAMYLMAAQQGHANGQNNLGRMYYNGYGVDKDYKQALEWYTKSAEQGHAYAQ 293
Query: 173 FNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
NLG Y V Y+ ++ GH AQY L G+G + ++A WY
Sbjct: 294 NNLGYMYYNGYGVDKNYKQALEWYTKSAEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWY 353
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
++AE G+ A N Y G+G+ + + A W K+A + H A+
Sbjct: 354 TKSAEQGHAYAQNNLGYMYENGKGVKIDYDTAISWFKKAVENKHPDAE 401
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G+ + +G GV K+ +AL+ + K A +G A + G MY+ +DK + A+ Y ++
Sbjct: 261 GRMYYNGYGVDKDYKQALEWYTKSAEQGHAYAQNNLGYMYYNGYGVDKNYKQALEWYTKS 320
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q++LG Y +++AV+ +++ GH AQ L G+GV
Sbjct: 321 AEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWYTKSAEQGHAYAQNNLGYMYENGKGVKI 380
Query: 216 NLQEAARWYLRAAE 229
+ A W+ +A E
Sbjct: 381 DYDTAISWFKKAVE 394
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 12/145 (8%)
Query: 151 DKKEAAISLYRQ---AAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRA 199
+K E IS + + A G+ Q+ LG Y + V+ Y+ + G+ A
Sbjct: 57 EKPEETISEFDKLKLDAEGGNSEAQYLLGKRYSDGDGVEKDYKKAFEWFKKGADQGNANA 116
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
Q L +C G+GV+ N A Y +A E G +A N + Y G G+ S+ +A +
Sbjct: 117 QNALGVCYDNGQGVEKNYTIAIDLYKKAIEQGNAKAQNNLGVMYYNGHGVDKSYEKAFEL 176
Query: 260 MKRAADCGHGKAQLEHGLGLFTEGE 284
K+AA+ G+ AQ G ++ GE
Sbjct: 177 YKKAAEQGNAYAQNNLGY-MYENGE 200
>gi|403264818|ref|XP_003924668.1| PREDICTED: protein sel-1 homolog 1 [Saimiri boliviensis
boliviensis]
Length = 795
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 388 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 447
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 448 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 507
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 508 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 567
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 568 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 604
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 263 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 322
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 323 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 382
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 383 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 442
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 443 ADMGNPVGQ--SGLGM 456
>gi|410962775|ref|XP_003987944.1| PREDICTED: protein sel-1 homolog 1 [Felis catus]
Length = 795
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 388 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 447
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 448 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 507
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 508 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 567
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 568 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 604
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 263 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 322
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 323 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 382
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 383 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 442
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 443 ADMGNPVGQ--SGLGM 456
>gi|296215648|ref|XP_002754215.1| PREDICTED: protein sel-1 homolog 1 [Callithrix jacchus]
Length = 794
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|384411626|ref|YP_005620991.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932000|gb|AEH62540.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 234
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 96/213 (45%), Gaps = 16/213 (7%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAV 165
R GR V+ D K A RG A G Y + E A+S Y+++A
Sbjct: 16 RIGVGRVVKMTRDGLKSPLQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQKSAS 75
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G Q LG +Y ++AV +A+ G+ AQY L + G+GV +
Sbjct: 76 QGYAPAQAALGYAYSSGLGVPHDDQQAVSFFQKAANQGNASAQYNLGMAYSNGQGVPHSD 135
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+EAA WY RAA GY A +N Y GEG+ + QA W ++AA+ G KAQ G+
Sbjct: 136 EEAASWYQRAAHQGYAPAEFNLGAAYYHGEGVVQDYGQAVFWYQKAAEQGDAKAQTALGV 195
Query: 278 GLFTEGEMMK----AVVYLELATRAGETAADHV 306
T + K A+++++ A G+ A +
Sbjct: 196 AYITGRGVTKSRDNALIWIQKAADQGDVTAQKI 228
>gi|118091892|ref|XP_421303.2| PREDICTED: protein sel-1 homolog 1 [Gallus gallus]
Length = 791
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +++AA +G+
Sbjct: 385 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQNNETALQYFKKAADMGN 444
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 445 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 504
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 505 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 564
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 313
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 565 KDGDSNSAVVQYLLLAEQGYEVAQSNAAFILDQK 598
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 260 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 319
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 320 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFVAEKGDVQAQVGLGQ 379
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G + +P ++ A ++ K+A
Sbjct: 380 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQNNETALQYFKKA 439
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 440 ADMGNPVGQ--SGLGM 453
>gi|332223462|ref|XP_003260889.1| PREDICTED: protein sel-1 homolog 1 [Nomascus leucogenys]
Length = 794
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|291406675|ref|XP_002719662.1| PREDICTED: sel-1 suppressor of lin-12-like isoform 1 [Oryctolagus
cuniculus]
Length = 794
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|326920893|ref|XP_003206701.1| PREDICTED: protein sel-1 homolog 1-like, partial [Meleagris
gallopavo]
Length = 767
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +++AA +G+
Sbjct: 361 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQNNETALQYFKKAADMGN 420
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 421 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 480
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 481 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 540
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 313
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 541 KDGDSNSAVVQYLLLAEQGYEVAQSNAAFILDQK 574
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 236 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 295
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 296 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFVAEKGDVQAQVGLGQ 355
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G + +P ++ A ++ K+A
Sbjct: 356 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQNNETALQYFKKA 415
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 416 ADMGNPVGQ--SGLGM 429
>gi|410630928|ref|ZP_11341612.1| hypothetical protein GARC_1506 [Glaciecola arctica BSs20135]
gi|410149437|dbj|GAC18479.1| hypothetical protein GARC_1506 [Glaciecola arctica BSs20135]
Length = 627
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 14/147 (9%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVR 198
Y++ A+ Y+QAA LG+ + ++ LG Y +A QA+ GH +
Sbjct: 450 YYQQQNYPEALYYYQQAAKLGNVSAEYLLGKMYENGQGTEQNMRQAANWYTQAAKHGHNQ 509
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ L +G GVD + +AA WY +AAE G++ A YN + YS G+G+ +H+QA
Sbjct: 510 AQATLGFMYSKGNGVDQDYSQAAYWYQKAAEQGHMNAQYNLAYLYSLGQGIVKNHQQAAY 569
Query: 259 WMKRAADCGHGKAQ------LEHGLGL 279
W ++AA G AQ E GLG+
Sbjct: 570 WFEKAAIQGDADAQNSLGKLYERGLGV 596
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK +++G+G +N+ +A + + + A G A G MY K Y QAA
Sbjct: 479 GKMYENGQGTEQNMRQAANWYTQAAKHGHNQAQATLGFMY---SKGNGVDQDYSQAA--- 532
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
Y ++A + GH+ AQY LA G+G+ N Q+AA W+ +A
Sbjct: 533 -----------YWYQKAAE-------QGHMNAQYNLAYLYSLGQGIVKNHQQAAYWFEKA 574
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
A G A + Y G G+ +A++ ++AAD G+ A++
Sbjct: 575 AIQGDADAQNSLGKLYERGLGVSQDLAEAKRLYQQAADQGNQMAKI 620
>gi|395503786|ref|XP_003756243.1| PREDICTED: protein sel-1 homolog 1 [Sarcophilus harrisii]
Length = 848
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 442 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 501
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V + Y +A+ G V Q QL + G GV + ++A
Sbjct: 502 PVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 561
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 562 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMSAYNSY 621
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 313
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 622 KDGDSNAAVVQYLLLAEQGYEVAQSNAAFILDQK 655
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 180 LQEEAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
L+E+ ++ + G V+AQ L L LH GRGV+ N Q A ++ AA G AM
Sbjct: 411 LEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAF 470
Query: 239 TSLCYSFGEGL-PLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
YS G + P S+ A + K+AAD G+ Q GLG+
Sbjct: 471 LGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQ--SGLGM 510
>gi|226329222|ref|ZP_03804740.1| hypothetical protein PROPEN_03125 [Proteus penneri ATCC 35198]
gi|225202408|gb|EEG84762.1| Sel1 repeat protein [Proteus penneri ATCC 35198]
Length = 242
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQ 172
+ ++ +KA+ + K A +G +LA + + Y + D E A+ Y +A GD Q
Sbjct: 8 IDRDAEKAVYWYNKAAVQGVSLAQYNLAVSYDDGDGVEQDHEKAVYWYTKAGEQGDSDAQ 67
Query: 173 FNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+NLGISY + E+AV +A+ GH AQY LA+ G GV+ N +A WY
Sbjct: 68 YNLGISYDEGIGVAQDHEKAVVWYTKAAEQGHSDAQYNLAVSYDDGEGVERNGTKAVFWY 127
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLF 280
+AA G A N + Y G+G+ R+A +W +++A G+G AQ L + G
Sbjct: 128 TKAANQGNRDAQNNLGVMYDEGDGVAKDARKAVEWYRKSAIQGNGLAQNNLALNYYYGKG 187
Query: 281 TEGEMMKAVVYLELATRAGE 300
+ ++ +A + +A G+
Sbjct: 188 VKRDLKEAYAWFAVAVENGD 207
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 178 SYLQEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
Y+ +A K +Y +A++ G AQY LA+ G GV+ + ++A WY +A E G
Sbjct: 6 DYIDRDAEKAVYWYNKAAVQGVSLAQYNLAVSYDDGDGVEQDHEKAVYWYTKAGEQGDSD 65
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAV 289
A YN + Y G G+ H +A W +AA+ GH AQ + + +GE + KAV
Sbjct: 66 AQYNLGISYDEGIGVAQDHEKAVVWYTKAAEQGHSDAQYNLAVS-YDDGEGVERNGTKAV 124
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRD 320
+ A G A + V+ + ++D
Sbjct: 125 FWYTKAANQGNRDAQNNLGVMYDEGDGVAKD 155
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G GV ++ +KA+ + K +G + A + G+ Y E E A+ Y +AA
Sbjct: 38 YDDGDGVEQDHEKAVYWYTKAGEQGDSDAQYNLGISYDEGIGVAQDHEKAVVWYTKAAEQ 97
Query: 167 GDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q+NL +SY E V+ +A+ G+ AQ L + G GV + +
Sbjct: 98 GHSDAQYNLAVSYDDGEGVERNGTKAVFWYTKAANQGNRDAQNNLGVMYDEGDGVAKDAR 157
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
+A WY ++A G A N +L Y +G+G+ ++A W A + G G
Sbjct: 158 KAVEWYRKSAIQGNGLAQNNLALNYYYGKGVKRDLKEAYAWFAVAVENGDG 208
>gi|73964368|ref|XP_537530.2| PREDICTED: protein sel-1 homolog 1 [Canis lupus familiaris]
Length = 794
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|381394956|ref|ZP_09920667.1| sel1 domain protein repeat-containing protein [Glaciecola punicea
DSM 14233 = ACAM 611]
gi|379329563|dbj|GAB55800.1| sel1 domain protein repeat-containing protein [Glaciecola punicea
DSM 14233 = ACAM 611]
Length = 401
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GV K+ + F A +G A + GLMY+ D KEAA YR
Sbjct: 119 GIMYYSGQGVLKDFKEGAKWFKLSAEQGHANAQSNLGLMYYFGDGVLQDSKEAA-KWYRL 177
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD + QF LG Y +EAVK A+ G AQY + L + G GV
Sbjct: 178 AAEQGDASAQFVLGGIYYDGQGVIQDYKEAVKWFKLAAEQGDADAQYAIGLMYYSGDGVL 237
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +EAA+WY AAE G A +N Y+ G+G+ ++A KW + AA+ G +AQ
Sbjct: 238 QDSKEAAKWYRLAAEQGDANAQFNLGNMYAKGDGVLKDSKEAAKWYRLAAEQGDAEAQSN 297
Query: 275 HGLGLFTEGE 284
GL + GE
Sbjct: 298 LGLA-YANGE 306
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 95/193 (49%), Gaps = 20/193 (10%)
Query: 132 AARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ----- 181
A G A + G MY+ D KEAA YR A+ G+ QFNL + Y+
Sbjct: 35 AQDGDAEAQYELGNMYYFGEGVLQDSKEAA-KWYRLASEQGNAEAQFNLALMYVSGEDVL 93
Query: 182 ---EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+EA K A+ G AQY L + + G+GV + +E A+W+ +AE G+ A N
Sbjct: 94 QDSKEAAKWFKLAAEQGDASAQYNLGIMYYSGQGVLKDFKEGAKWFKLSAEQGHANAQSN 153
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLE 293
L Y FG+G+ ++A KW + AA+ G AQ G G++ +G+ + +AV + +
Sbjct: 154 LGLMYYFGDGVLQDSKEAAKWYRLAAEQGDASAQFVLG-GIYYDGQGVIQDYKEAVKWFK 212
Query: 294 LATRAGETAADHV 306
LA G+ A +
Sbjct: 213 LAAEQGDADAQYA 225
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV ++ +A + + +G+ A + LMY D KEAA ++
Sbjct: 47 GNMYYFGEGVLQDSKEAAKWYRLASEQGNAEAQFNLALMYVSGEDVLQDSKEAA-KWFKL 105
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD + Q+NLGI Y +E K ++ GH AQ L L + G GV
Sbjct: 106 AAEQGDASAQYNLGIMYYSGQGVLKDFKEGAKWFKLSAEQGHANAQSNLGLMYYFGDGVL 165
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +EAA+WY AAE G A + Y G+G+ +++A KW K AA+ G AQ
Sbjct: 166 QDSKEAAKWYRLAAEQGDASAQFVLGGIYYDGQGVIQDYKEAVKWFKLAAEQGDADAQYA 225
Query: 275 HGLGLFT 281
GL ++
Sbjct: 226 IGLMYYS 232
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQ 202
+K+ + I +Q A GD Q+ LG Y LQ+ EA K AS G+ AQ+
Sbjct: 22 EKENSVIEFLQQLAQDGDAEAQYELGNMYYFGEGVLQDSKEAAKWYRLASEQGNAEAQFN 81
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
LAL G V + +EAA+W+ AAE G A YN + Y G+G+ ++ KW K
Sbjct: 82 LALMYVSGEDVLQDSKEAAKWFKLAAEQGDASAQYNLGIMYYSGQGVLKDFKEGAKWFKL 141
Query: 263 AADCGHGKAQLEHGL-GLFTEGEMM---KAVVYLELATRAGETAADHV 306
+A+ GH AQ GL F +G + +A + LA G+ +A V
Sbjct: 142 SAEQGHANAQSNLGLMYYFGDGVLQDSKEAAKWYRLAAEQGDASAQFV 189
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GV ++ +A+ F A +G A GLMY+ D KEAA YR
Sbjct: 191 GGIYYDGQGVIQDYKEAVKWFKLAAEQGDADAQYAIGLMYYSGDGVLQDSKEAA-KWYRL 249
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD QFNLG Y + +EA K A+ G AQ L L G GV
Sbjct: 250 AAEQGDANAQFNLGNMYAKGDGVLKDSKEAAKWYRLAAEQGDAEAQSNLGLAYANGEGVI 309
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
+ +E+A+WY AAE G+ A +N Y+ GEG+ + W
Sbjct: 310 QDYKESAKWYRLAAEQGHADAQFNLGNMYADGEGVLKDFITSYSW 354
>gi|426234313|ref|XP_004011140.1| PREDICTED: LOW QUALITY PROTEIN: protein sel-1 homolog 1 [Ovis
aries]
Length = 768
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 366 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 425
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 426 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 485
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 486 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 545
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 546 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 582
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 241 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 300
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 301 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 360
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 361 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 420
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 421 ADMGNPVGQ--SGLGM 434
>gi|147906805|ref|NP_001090027.1| sel-1 suppressor of lin-12-like precursor [Xenopus laevis]
gi|63100236|gb|AAH95916.1| MGC99195 protein [Xenopus laevis]
Length = 822
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 14/217 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +R+AA +G+
Sbjct: 407 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDSVTQSNETALQYFRKAADMGN 466
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 467 PVGQSGLGMAYLYGRGVPVDYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKKDYKQA 526
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 527 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSDRLMTAYNSY 586
Query: 281 TEGEM-MKAVVYLELATRAGETAADHVKNVILQQLSA 316
G + AV YL LA + E A + ++ Q+ +A
Sbjct: 587 KNGNANIAAVQYLLLAEQGYEVAQSNAAFILDQKEAA 623
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G+ + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 282 GFLYASGLGLNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 341
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 342 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 401
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G + + S+ A ++ ++A
Sbjct: 402 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDSVTQSNETALQYFRKA 461
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 462 ADMGNPVGQ--SGLGM 475
>gi|354477646|ref|XP_003501030.1| PREDICTED: protein sel-1 homolog 1 isoform 2 [Cricetulus griseus]
Length = 744
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 337 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 396
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 397 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 456
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 457 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 516
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AVV YL LA + E A + IL Q AT
Sbjct: 517 KDGDYNAAVVQYLLLAEQGYEVAQSN-SAFILDQKEAT 553
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 212 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 271
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 272 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 331
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 332 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 391
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 392 ADMGNPVGQ--SGLGM 405
>gi|301765876|ref|XP_002918357.1| PREDICTED: protein sel-1 homolog 1-like [Ailuropoda melanoleuca]
Length = 794
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|224051584|ref|XP_002200585.1| PREDICTED: protein sel-1 homolog 1 [Taeniopygia guttata]
Length = 791
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +++AA +G+
Sbjct: 386 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQSNETALQYFKKAADMGN 445
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 446 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKKDYKQA 505
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 506 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 565
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 313
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 566 KDGDSNSAVVQYLLLAEQGYEVAQSNAAFILDQK 599
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 261 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 320
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 321 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 380
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G + +P S+ A ++ K+A
Sbjct: 381 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQSNETALQYFKKA 440
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 441 ADMGNPVGQ--SGLGM 454
>gi|281351393|gb|EFB26977.1| hypothetical protein PANDA_006801 [Ailuropoda melanoleuca]
Length = 762
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 355 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 414
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 415 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 474
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 475 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 534
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 535 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 571
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 230 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 289
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 290 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 349
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 350 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 409
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 410 ADMGNPVGQ--SGLGM 423
>gi|380787275|gb|AFE65513.1| protein sel-1 homolog 1 isoform 1 precursor [Macaca mulatta]
gi|383410365|gb|AFH28396.1| protein sel-1 homolog 1 precursor [Macaca mulatta]
Length = 794
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|402876881|ref|XP_003902180.1| PREDICTED: protein sel-1 homolog 1 [Papio anubis]
gi|355693487|gb|EHH28090.1| hypothetical protein EGK_18436 [Macaca mulatta]
Length = 794
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|290992478|ref|XP_002678861.1| predicted protein [Naegleria gruberi]
gi|284092475|gb|EFC46117.1| predicted protein [Naegleria gruberi]
Length = 522
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAI 157
+ L G ++ G GV K+ KA + F A G+ A + MY E A+
Sbjct: 258 ITLCNLGLMYRDGLGVSKSFGKARNLFKAAALLGNATAQNNLANMYENGQGGSLSLEKAV 317
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR 209
YR++A G+ Q+NL + Y E+A K +++ G+V AQ LA
Sbjct: 318 KWYRESANQGNAVAQYNLALLYENGKVVAKSFEKAFKWYEKSASQGNVHAQNNLASLYES 377
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
GRG + ++A WYL+AA+ G+ A YN ++ Y +G+G S +A +W +++A
Sbjct: 378 GRGTKQSFKKAFEWYLKAAQQGHSEAQYNLAVMYEYGQGTEQSFGKAVQWYEKSASQCDA 437
Query: 270 KAQLEHGL 277
AQ GL
Sbjct: 438 DAQFNLGL 445
>gi|344274094|ref|XP_003408853.1| PREDICTED: protein sel-1 homolog 1 [Loxodonta africana]
Length = 792
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 385 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 444
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 445 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 504
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 505 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMAAYNSY 564
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 565 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 601
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 260 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 319
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 320 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 379
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 380 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 439
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 440 ADMGNPVGQ--SGLGM 453
>gi|291406677|ref|XP_002719663.1| PREDICTED: sel-1 suppressor of lin-12-like isoform 2 [Oryctolagus
cuniculus]
Length = 744
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 337 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 396
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 397 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 456
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 457 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 516
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 517 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 553
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 212 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 271
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 272 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 331
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 332 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 391
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 392 ADMGNPVGQ--SGLGM 405
>gi|109084486|ref|XP_001105925.1| PREDICTED: protein sel-1 homolog 1-like [Macaca mulatta]
Length = 794
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 83/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ Y
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYHLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|260753305|ref|YP_003226198.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552668|gb|ACV75614.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 237
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 96/213 (45%), Gaps = 16/213 (7%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAV 165
R GR V+ D K A RG A G Y + E A+S Y+++A
Sbjct: 19 RIGVGRVVKMTRDGLKSPLQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQKSAS 78
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G Q LG +Y ++AV +A+ G+ AQY L + G+GV +
Sbjct: 79 QGYAPAQAALGYAYSSGLGVPHDDQQAVSFFQKAANQGNASAQYNLGMAYSNGQGVPHSD 138
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+EAA WY RAA GY A +N Y GEG+ + QA W ++AA+ G KAQ G+
Sbjct: 139 EEAASWYQRAAHQGYAPAEFNLGAAYYHGEGVVQDYGQAVFWYQKAAEQGDAKAQTALGV 198
Query: 278 GLFTEGEMMK----AVVYLELATRAGETAADHV 306
T + K A+++++ A G+ A +
Sbjct: 199 AYITGRGVAKSRDNALIWIQKAADQGDVTAQKI 231
>gi|332634806|ref|NP_001193837.1| protein sel-1 homolog 1 precursor [Bos taurus]
gi|296482865|tpg|DAA24980.1| TPA: sel-1 suppressor of lin-12-like [Bos taurus]
Length = 794
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYSSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDSNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|351694360|gb|EHA97278.1| sel-1-like protein 1 [Heterocephalus glaber]
Length = 793
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 15/222 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 386 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 445
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 446 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 505
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 506 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 565
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSATSRDR 321
+G AV+ YL LA + E A + IL Q AT D
Sbjct: 566 KDGGYNAAVIQYLLLAEQGYEVAQSNAA-FILDQKEATIVDE 606
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 261 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 320
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 321 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 380
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 381 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 440
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 441 ADMGNPVGQ--SGLGM 454
>gi|126282500|ref|XP_001373506.1| PREDICTED: protein sel-1 homolog 1-like [Monodelphis domestica]
Length = 881
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 14/214 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 475 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 534
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 535 PVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 594
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 595 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMSAYNSY 654
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 313
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 655 KDGDSNAAVVQYLLLAEQGYEVAQSNAAFILDQK 688
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 83/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G V + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 350 GFLYASGLSVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 409
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 410 ANHVASDISLTGGTVVQRIRLPDEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 469
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 470 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 529
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 530 ADMGNPVGQ--SGLGM 543
>gi|301618001|ref|XP_002938416.1| PREDICTED: protein sel-1 homolog 1 [Xenopus (Silurana) tropicalis]
Length = 822
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E + E A+ +R+AA +G+
Sbjct: 407 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDTVIQSNETALQYFRKAADMGN 466
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 467 PVGQSGLGMAYLYGRGVPVDYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKKDYKQA 526
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN ++ G G+ S A + K + G +L +
Sbjct: 527 LKYFNLASQGGHILAFYNLGQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMIAYNSY 586
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSA 316
G A V YL LA + E A + ++ QQ +A
Sbjct: 587 KNGNANTAAVQYLLLAEQGYEVAQSNAAFILDQQEAA 623
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G+ + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 282 GFLYASGLGLNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 341
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 342 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 401
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL-SHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G + S+ A ++ ++A
Sbjct: 402 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDTVIQSNETALQYFRKA 461
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 462 ADMGNPVGQ--SGLGM 475
>gi|171914139|ref|ZP_02929609.1| Sel1 domain protein repeat-containing protein [Verrucomicrobium
spinosum DSM 4136]
Length = 381
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R+ G G+ K+ KA + + A + AM G M E D+K+A Y +
Sbjct: 57 GIRYLGGEGMPKDEKKAAEWLTRAAEKEKLEAMNALGTMNEEGVGFPKDEKKA-FEWYEK 115
Query: 163 AAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NL G+ Q EA K L +A+ +Q A L RG G+D
Sbjct: 116 AAKYGLALAQQNLSQCYELGKGVEKNQAEANKWLKRAADQDFAPSQAMYAFKLERGLGID 175
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
N +EAA WYL+AA+ G +RAM + + Y G G+PL +R+A W +RAA
Sbjct: 176 KNTREAAEWYLKAAQNGLIRAMTHLAYLYYTGTGVPLDYRRAEAWYRRAA 225
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 161 RQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+Q A G+ QF LGI YL +++A + L +A+ + A L G G
Sbjct: 42 QQLAERGNADAQFELGIRYLGGEGMPKDEKKAAEWLTRAAEKEKLEAMNALGTMNEEGVG 101
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ ++A WY +AA+ G A N S CY G+G+ + +A KW+KRAAD +Q
Sbjct: 102 FPKDEKKAFEWYEKAAKYGLALAQQNLSQCYELGKGVEKNQAEANKWLKRAADQDFAPSQ 161
Query: 273 ------LEHGLGL 279
LE GLG+
Sbjct: 162 AMYAFKLERGLGI 174
>gi|449274840|gb|EMC83918.1| Protein sel-1 like protein 1, partial [Columba livia]
Length = 769
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +++AA +G+
Sbjct: 364 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQSNETALQYFKKAADMGN 423
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 424 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 483
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 484 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 543
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 313
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 544 KDGDSNSAVVQYLLLAEQGYEVAQSNAAFILDQK 577
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 239 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 298
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 299 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 358
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ +AA G AM YS G + +P S+ A ++ K+A
Sbjct: 359 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQSNETALQYFKKA 418
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 419 ADMGNPVGQ--SGLGM 432
>gi|440493501|gb|ELQ75963.1| Extracellular protein SEL-1 [Trachipleistophora hominis]
Length = 585
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 12/179 (6%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE 154
+ + + G ++ G+G KN+ A + + A G+ A G Y E +K E
Sbjct: 197 MNDPVATYNMGFCYEEGKGTDKNIKYAFLWYKRAAEMGNPFAQNSLGYCYEEGLGTEKDE 256
Query: 155 -AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
A +LYR +A+ G P Q NL + Q +++ + +A+I G RAQ+ L
Sbjct: 257 DKAFALYRASALQGYPWAQSNLAYCFQQGIGVQKDLKKSFEWYERAAIQGLSRAQHNLGH 316
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
C H+G G D N+ EA WY RAA+ + A ++ CY GEG+P R+A ++ K AA
Sbjct: 317 CYHQGMGTDKNVTEAVMWYRRAAKQKNLYAFHSLGNCYQNGEGVPKDEREAVRFYKLAA 375
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 48/244 (19%)
Query: 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSF 128
++++ A +LRA +W + L + G + GVR+ ++++ +
Sbjct: 96 IDRLEAQILQNKLRAIGSASVAWLEKAAKLGNSYAQYCLGTCYHDALGVRRCTKRSIEWY 155
Query: 129 LKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQ--- 181
+ AA+ + A+ G Y E ++K E A LY QAA + DP +N+G Y +
Sbjct: 156 TRSAAQHNPCAIGVLGFCYLEGFGVEKDEYRAFVLYLQAARMNDPVATYNMGFCYEEGKG 215
Query: 182 ----------------------------------------EEAVKLLYQAS-IAGHVRAQ 200
E+ LY+AS + G+ AQ
Sbjct: 216 TDKNIKYAFLWYKRAAEMGNPFAQNSLGYCYEEGLGTEKDEDKAFALYRASALQGYPWAQ 275
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
LA C +G GV +L+++ WY RAA G RA +N CY G G + +A W
Sbjct: 276 SNLAYCFQQGIGVQKDLKKSFEWYERAAIQGLSRAQHNLGHCYHQGMGTDKNVTEAVMWY 335
Query: 261 KRAA 264
+RAA
Sbjct: 336 RRAA 339
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
AI Y ++A +P Q NLG Y + E+AV A+ GH RA +L C
Sbjct: 439 AIMWYTKSASANNPWAQTNLGTIYFEGIHVPMDREKAVYYFKLAANQGHSRAYSKLGYCY 498
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G V N A +Y +AAE GY RA Y CY G G+ ++ QA + + + G
Sbjct: 499 EEGIVVHKNPSIAFSYYSKAAEQGYNRAYYALGKCYERGFGISVNMNQALSYFYKGSFYG 558
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVL 166
F+ G GV+K+L K+ + + + A +G + A + G Y + DK A+ YR+AA
Sbjct: 282 FQQGIGVQKDLKKSFEWYERAAIQGLSRAQHNLGHCYHQGMGTDKNVTEAVMWYRRAAKQ 341
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
+ +LG Y + EAV+ A++ V + L+ C G GVD N
Sbjct: 342 KNLYAFHSLGNCYQNGEGVPKDEREAVRFYKLAALKNFVPSLISLSFCYRLGLGVDTNAL 401
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 277
+ + +AAE A + Y G G + A W ++A + AQ G
Sbjct: 402 SSFYYMKKAAELRNAYAQNCLAFFYEEGYGTKRNINLAIMWYTKSASANNPWAQTNLGTI 461
Query: 278 ---GLFTEGEMMKAVVYLELATRAGETAA 303
G+ + KAV Y +LA G + A
Sbjct: 462 YFEGIHVPMDREKAVYYFKLAANQGHSRA 490
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 103/269 (38%), Gaps = 67/269 (24%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV------DAGLMYWEMDKK 153
E++ +L + F G GV +N+ KA ++ +++ S LA+V G +D+
Sbjct: 42 ESLAILSFCYEF--GIGVHRNIKKAEYGYMISSSKNSGLALVRLTFLRKFGRPNVRIDRL 99
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
EA I L + +G + +++L E+A KL G+ AQY L C H GV
Sbjct: 100 EAQI-LQNKLRAIGSAS------VAWL-EKAAKL-------GNSYAQYCLGTCYHDALGV 144
Query: 214 DFNLQEAARWYLRAA----------------EGGYVR--------------------AMY 237
+ + WY R+A EG V A Y
Sbjct: 145 RRCTKRSIEWYTRSAAQHNPCAIGVLGFCYLEGFGVEKDEYRAFVLYLQAARMNDPVATY 204
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVY 291
N CY G+G + + A W KRAA+ G+ AQ E GLG TE + KA
Sbjct: 205 NMGFCYEEGKGTDKNIKYAFLWYKRAAEMGNPFAQNSLGYCYEEGLG--TEKDEDKAFAL 262
Query: 292 LELATRAGETAADHVKNVILQQLSATSRD 320
+ G A QQ +D
Sbjct: 263 YRASALQGYPWAQSNLAYCFQQGIGVQKD 291
>gi|388601080|ref|ZP_10159476.1| hypothetical protein VcamD_14460 [Vibrio campbellii DS40M4]
Length = 370
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+ +G+G+ ++ +A+ + K A +G +A + G MY D K+A + +AA
Sbjct: 59 YLYGQGITQDDKQAVYWYRKAAEQGDAIAQRNLGFMYLRGQGVTQDDKQA-FYWFHKAAE 117
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G P Q+ LG+ YL +A+ +A+ G V +QY L G+GV +
Sbjct: 118 QGLPKAQYILGLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQDD 177
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A WY +AAE G RA N + YS G G+ +QA W+ +AA+ G AQ H L
Sbjct: 178 KQAVYWYRKAAEQGLARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQ--HNL 235
Query: 278 GLFTE-GEMMKAVVY 291
G + G+ K VY
Sbjct: 236 GFMNQNGQDYKQAVY 250
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 28/225 (12%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + L +A +L G + +G+GV ++ ++A+ F K A +G ++ G +Y+
Sbjct: 116 AEQGLPKAQYIL--GLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGV 173
Query: 150 -MDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQ 200
D K+A + YR+AA G Q NLG+ Y +++AV L++A+ G AQ
Sbjct: 174 TQDDKQA-VYWYRKAAEQGLARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQ 232
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ L G+ + ++A WY +AAE G RA N L Y G+GL +QA W
Sbjct: 233 HNLGFMNQNGQ----DYKQAVYWYRKAAEQGLARAQSNLGLMYLHGQGLIQDDKQAVYWF 288
Query: 261 KRAADCGHGKAQLEHGLGL-FTEGEMM-----KAVVYLELATRAG 299
++AA G AQ H LGL + G+ + +A ++L LA G
Sbjct: 289 RKAAKQGFAIAQ--HNLGLVYLNGKGVTQDNAQAYMWLSLARHNG 331
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 16/197 (8%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V + N A+ R+A M G + +G+GV ++ +A+ + K A +G A
Sbjct: 137 VIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQDDKQAVYWYRKAAEQGLARAQ 196
Query: 141 VDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ----EEAVKLLYQA 191
+ G+MY D+K+A L++ AA GD Q NLG ++AV +A
Sbjct: 197 SNLGVMYSHGRGVAQDEKQAVYWLHK-AAEQGDAIAQHNLGFMNQNGQDYKQAVYWYRKA 255
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
+ G RAQ L L G+G+ + ++A W+ +AA+ G+ A +N L Y G+G+
Sbjct: 256 AEQGLARAQSNLGLMYLHGQGLIQDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVTQ 315
Query: 252 SHRQARKWMKRAADCGH 268
+ QA W+ A GH
Sbjct: 316 DNAQAYMWLSLARHNGH 332
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQ 190
A D G + + A S + A G+ QFNL + YL ++AV +
Sbjct: 19 ADFDKGFDAYNQGDFKTAYSEWFPLAEQGEANAQFNLALMYLYGQGITQDDKQAVYWYRK 78
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G AQ L RG+GV + ++A W+ +AAE G +A Y L Y G+G+
Sbjct: 79 AAEQGDAIAQRNLGFMYLRGQGVTQDDKQAFYWFHKAAEQGLPKAQYILGLMYLNGQGVI 138
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGL 279
QA W ++AA G G ++ LG
Sbjct: 139 QDDNQAIYWFRKAA--GQGGVMSQYYLGF 165
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQ+ LAL G+G+ + ++A WY +AAE G A N Y G+G+ +
Sbjct: 47 GEANAQFNLALMYLYGQGITQDDKQAVYWYRKAAEQGDAIAQRNLGFMYLRGQGVTQDDK 106
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
QA W +AA+ G KAQ GL ++ G+
Sbjct: 107 QAFYWFHKAAEQGLPKAQYILGL-MYLNGQ 135
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + HGRGV ++ +A+ K A +G +A + G M + A+ YR+AA G
Sbjct: 200 GVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQHNLGFMNQNGQDYKQAVYWYRKAAEQG 259
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
Q NLG+ YL ++AV +A+ G AQ+ L L G+GV + +
Sbjct: 260 LARAQSNLGLMYLHGQGLIQDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVTQDNAQ 319
Query: 220 AARWYLRAAEGGY--VRAMYNT 239
A W A G+ + +NT
Sbjct: 320 AYMWLSLARHNGHKNTKENFNT 341
>gi|184157439|ref|YP_001845778.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ACICU]
gi|332874101|ref|ZP_08442035.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|384142513|ref|YP_005525223.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii MDR-ZJ06]
gi|385236836|ref|YP_005798175.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TCDC-AB0715]
gi|387124613|ref|YP_006290495.1| hypothetical protein ABTJ_02605 [Acinetobacter baumannii MDR-TJ]
gi|407932176|ref|YP_006847819.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TYTH-1]
gi|416149191|ref|ZP_11602752.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AB210]
gi|417578481|ref|ZP_12229314.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|421629690|ref|ZP_16070412.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|421686544|ref|ZP_16126294.1| Sel1 repeat protein [Acinetobacter baumannii IS-143]
gi|421702959|ref|ZP_16142430.1| hypothetical protein B825_06821 [Acinetobacter baumannii ZWS1122]
gi|421709172|ref|ZP_16148534.1| hypothetical protein B837_18740 [Acinetobacter baumannii ZWS1219]
gi|424053126|ref|ZP_17790658.1| hypothetical protein W9G_01815 [Acinetobacter baumannii Ab11111]
gi|445473168|ref|ZP_21452719.1| Sel1 repeat protein [Acinetobacter baumannii OIFC338]
gi|183209033|gb|ACC56431.1| TPR repeat, SEL1 subfamily protein [Acinetobacter baumannii ACICU]
gi|323517333|gb|ADX91714.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TCDC-AB0715]
gi|332737713|gb|EGJ68606.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|333364607|gb|EGK46621.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AB210]
gi|347593006|gb|AEP05727.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii MDR-ZJ06]
gi|385879105|gb|AFI96200.1| TPR repeat-containing protein [Acinetobacter baumannii MDR-TJ]
gi|395567619|gb|EJG28293.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|404568114|gb|EKA73223.1| Sel1 repeat protein [Acinetobacter baumannii IS-143]
gi|404670767|gb|EKB38650.1| hypothetical protein W9G_01815 [Acinetobacter baumannii Ab11111]
gi|407188463|gb|EKE59709.1| hypothetical protein B837_18740 [Acinetobacter baumannii ZWS1219]
gi|407193335|gb|EKE64502.1| hypothetical protein B825_06821 [Acinetobacter baumannii ZWS1122]
gi|407900757|gb|AFU37588.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TYTH-1]
gi|408700358|gb|EKL45817.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|444769455|gb|ELW93640.1| Sel1 repeat protein [Acinetobacter baumannii OIFC338]
Length = 285
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAIS--LYRQAAVLGD-P 169
+ ++ ++ KA++ + A +G A + GL+Y E K + A + Y +AAV GD P
Sbjct: 73 KDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNEHIKPDYAKAKYWYEKAAVQGDIP 132
Query: 170 A----GQF---NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
+ G F LGI ++A+K A+ AG AQ L GRGV N +EA++
Sbjct: 133 SLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLGTMFLHGRGVTQNKEEASQ 192
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 278
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ G AQ G G
Sbjct: 193 WYLKAAIQGDIDAQYNLGLMYLLGDGIKQDYPQAQKWFLAAANQGESNAQFHLGKIYKDG 252
Query: 279 LFTEGEMMKAVVYLELATRAGETAA 303
L + + A + E + AG + A
Sbjct: 253 LGVDKNLSLARTWFEKSAEAGNSYA 277
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G++++ KA+ +L A G + A + G M+ KE A Y +A
Sbjct: 138 GNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLGTMFLHGRGVTQNKEEASQWYLKA 197
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A+ GD Q+NLG+ YL + +K Y A+ G AQ+ L G GVD
Sbjct: 198 AIQGDIDAQYNLGLMYLLGDGIKQDYPQAQKWFLAAANQGESNAQFHLGKIYKDGLGVDK 257
Query: 216 NLQEAARWYLRAAEGG 231
NL A W+ ++AE G
Sbjct: 258 NLSLARTWFEKSAEAG 273
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLAL 205
+ AI Y AA GD Q NLG +L +EEA + +A+I G + AQY L L
Sbjct: 152 QKAIKYYLDAANAGDSDAQTNLGTMFLHGRGVTQNKEEASQWYLKAAIQGDIDAQYNLGL 211
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G G+ + +A +W+L AA G A ++ Y G G+ + AR W +++A+
Sbjct: 212 MYLLGDGIKQDYPQAQKWFLAAANQGESNAQFHLGKIYKDGLGVDKNLSLARTWFEKSAE 271
Query: 266 CGHGKAQLE 274
G+ A E
Sbjct: 272 AGNSYAAQE 280
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 161 RQAAVLGDPAGQFNLGISY------LQEEAVKLLYQASIA---GHVRAQYQLALCLHRGR 211
R A GDP Q+NLG+ Y +Q + +K + +++ G+V AQY L L
Sbjct: 50 RSKAEKGDPEAQYNLGVMYAEGYKDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNE 109
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+ + +A WY +AA G + ++ YS G G+ +++A K+ AA+ G A
Sbjct: 110 HIKPDYAKAKYWYEKAAVQGDIPSLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDA 169
Query: 272 QLEHGLGLFTEG 283
Q G +F G
Sbjct: 170 QTNLGT-MFLHG 180
>gi|410613424|ref|ZP_11324483.1| hypothetical protein GPSY_2760 [Glaciecola psychrophila 170]
gi|410167086|dbj|GAC38372.1| hypothetical protein GPSY_2760 [Glaciecola psychrophila 170]
Length = 671
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 14/147 (9%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVR 198
Y++ A+ Y+QAA LGD + Q+ LG Y +A QA+ GH++
Sbjct: 494 YYQQQNYPEALYYYQQAAKLGDVSSQYLLGEMYQDAKGTEQNMRQAAAWYTQAAQQGHIK 553
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ L +G GV+ + +A WY +AAE G++ A YN + YS G+G+ ++QA
Sbjct: 554 AQAILGFMYSKGNGVNQDYSQATIWYQKAAEQGHMNAQYNLAYLYSLGQGVIKDYQQAAH 613
Query: 259 WMKRAADCGHGKAQ------LEHGLGL 279
W +++A+ G AQ E GLG+
Sbjct: 614 WYQKSANQGDADAQNSLGKLYERGLGV 640
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDPAGQF 173
++N +AL + + A G + G MY + E A + Y QAA G Q
Sbjct: 497 QQNYPEALYYYQQAAKLGDVSSQYLLGEMYQDAKGTEQNMRQAAAWYTQAAQQGHIKAQA 556
Query: 174 NLGISYLQEEAVKLLY-QASI-------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
LG Y + V Y QA+I GH+ AQY LA G+GV + Q+AA WY
Sbjct: 557 ILGFMYSKGNGVNQDYSQATIWYQKAAEQGHMNAQYNLAYLYSLGQGVIKDYQQAAHWYQ 616
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
++A G A + Y G G+ + +A+ ++AA G+ AQL
Sbjct: 617 KSANQGDADAQNSLGKLYERGLGVNIDLAKAKNLYQQAAAQGNQIAQLN 665
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ ++ +G +N+ +A + + A +G A G MY + D +A I Y++
Sbjct: 523 GEMYQDAKGTEQNMRQAAAWYTQAAQQGHIKAQAILGFMYSKGNGVNQDYSQATI-WYQK 581
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q+NL Y + V YQ ++ G AQ L RG GV+
Sbjct: 582 AAEQGHMNAQYNLAYLYSLGQGVIKDYQQAAHWYQKSANQGDADAQNSLGKLYERGLGVN 641
Query: 215 FNLQEAARWYLRAAEGGYVRAMYN 238
+L +A Y +AA G A N
Sbjct: 642 IDLAKAKNLYQQAAAQGNQIAQLN 665
>gi|350587106|ref|XP_003128729.2| PREDICTED: protein sel-1 homolog 1-like [Sus scrofa]
Length = 713
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 14/213 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQ 312
+G+ AVV YL LA + E A + ++ Q
Sbjct: 567 KDGDYNAAVVQYLLLAEQGYEVAQSNAAFILDQ 599
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|160900665|ref|YP_001566247.1| Sel1 domain-containing protein [Delftia acidovorans SPH-1]
gi|160366249|gb|ABX37862.1| Sel1 domain protein repeat-containing protein [Delftia acidovorans
SPH-1]
Length = 416
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 19/231 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +GRGV ++ +A+ + K A +G +A + GLM E A+ ++++
Sbjct: 174 GLMYANGRGVARDDAQAVQWYRKAAEQGDAVAQNNLGLMLAEGRGAAKDPAQAVQWFQRS 233
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ AGQ++LG+ Y +A++ A+ GH AQ+ + G VD
Sbjct: 234 AEQGEAAGQYSLGVMYATGRGVAEDVGQALRWFVAAAGQGHADAQFNAGMLYAEGGVVDR 293
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE- 274
++ +AA W +AAE G A N + Y+ G+G+P S +A +W++RAA G AQ
Sbjct: 294 DMAQAAHWLEKAAEQGNAAAQSNLGVLYANGQGVPASDEKAARWLERAAQQGDALAQSNL 353
Query: 275 ---HGLGLFTEGEMMKAVVYLELATRAGETAADHVK-NVILQQLSATSRDR 321
+ G E + +A ++ LA AG ++ K + + Q LSA R R
Sbjct: 354 ASLYASGKGVERSLSQAYFWMLLA--AGRDSSLTAKRDSMAQPLSAAERAR 402
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA- 155
EA G +K G+GV + + A + K A +G A + GLMY + + +A
Sbjct: 130 EASAQYALGSLYKRGQGVAPSAETAAQWYEKSAQQGYAPAQSELGLMYANGRGVARDDAQ 189
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ YR+AA GD Q NLG+ + +AV+ +++ G QY L +
Sbjct: 190 AVQWYRKAAEQGDAVAQNNLGLMLAEGRGAAKDPAQAVQWFQRSAEQGEAAGQYSLGVMY 249
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV ++ +A RW++ AA G+ A +N + Y+ G + QA W+++AA+ G
Sbjct: 250 ATGRGVAEDVGQALRWFVAAAGQGHADAQFNAGMLYAEGGVVDRDMAQAAHWLEKAAEQG 309
Query: 268 HGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGET 301
+ AQ G+ L+ G+ + KA +LE A + G+
Sbjct: 310 NAAAQSNLGV-LYANGQGVPASDEKAARWLERAAQQGDA 347
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V L+Q + G AQY L RG+GV + + AA+WY ++A+ GY A L Y+
Sbjct: 119 VAALHQHAEQGEASAQYALGSLYKRGQGVAPSAETAAQWYEKSAQQGYAPAQSELGLMYA 178
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAG 299
G G+ QA +W ++AA+ G AQ GL + EG + +AV + + + G
Sbjct: 179 NGRGVARDDAQAVQWYRKAAEQGDAVAQNNLGL-MLAEGRGAAKDPAQAVQWFQRSAEQG 237
Query: 300 ETAADHVKNVI 310
E A + V+
Sbjct: 238 EAAGQYSLGVM 248
>gi|6851089|gb|AAF29413.1|AF052059_1 SEL1L [Homo sapiens]
gi|17646138|gb|AAL40905.1| sel-1 [Homo sapiens]
Length = 794
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 14/213 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQ 312
+G+ AV+ YL LA + E A + ++ Q
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAAFILDQ 599
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|19923669|ref|NP_005056.3| protein sel-1 homolog 1 isoform 1 precursor [Homo sapiens]
gi|62512184|sp|Q9UBV2.3|SE1L1_HUMAN RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
gi|6518495|dbj|BAA87904.1| TSA305 [Homo sapiens]
gi|6683458|dbj|BAA89204.1| TSA305 [Homo sapiens]
gi|119601750|gb|EAW81344.1| sel-1 suppressor of lin-12-like (C. elegans) [Homo sapiens]
gi|225000728|gb|AAI72282.1| Sel-1 suppressor of lin-12-like (C. elegans) [synthetic construct]
gi|225000928|gb|AAI72577.1| Sel-1 suppressor of lin-12-like (C. elegans) [synthetic construct]
Length = 794
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 14/213 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQ 312
+G+ AV+ YL LA + E A + ++ Q
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAAFILDQ 599
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|167629295|ref|YP_001679794.1| tpr repeat, sel1 subfamily [Heliobacterium modesticaldum Ice1]
gi|167592035|gb|ABZ83783.1| tpr repeat, sel1 subfamily, putative [Heliobacterium modesticaldum
Ice1]
Length = 221
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 20/201 (9%)
Query: 91 WNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG 144
++ AL LR+A +W R + GRGV ++ +A++ F + A +G LA +
Sbjct: 11 YDPALSALRQAAEGGDAEAQYQWALRCEEGRGVPQSAKQAVEWFARAAEQGHGLAQLSLA 70
Query: 145 LMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQA 191
++Y + D+ EAA Y +AA G Q L G+ A+ +A
Sbjct: 71 MLYEDGTGLAPDEAEAA-RWYERAAAQGIAEAQLYLARLFAEGRGVDRDDSRALAWYRKA 129
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
+ G AQ++LAL G+GV+ + EA RWY AAE G++ A +N + Y G+GLP
Sbjct: 130 AEQGEADAQFELALLYALGQGVEKDDAEAVRWYRLAAEQGHMDAQFNLAFMYEEGQGLPQ 189
Query: 252 SHRQARKWMKRAADCGHGKAQ 272
++A W ++AA+ G +AQ
Sbjct: 190 DRKEALAWYRKAAEQGDEEAQ 210
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCL 207
A+S RQAA GD Q+ G+ ++AV+ +A+ GH AQ LA+
Sbjct: 14 ALSALRQAAEGGDAEAQYQWALRCEEGRGVPQSAKQAVEWFARAAEQGHGLAQLSLAMLY 73
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G+ + EAARWY RAA G A + ++ G G+ +A W ++AA+ G
Sbjct: 74 EDGTGLAPDEAEAARWYERAAAQGIAEAQLYLARLFAEGRGVDRDDSRALAWYRKAAEQG 133
Query: 268 HGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
AQ E + LG E + +AV + LA G A + ++ +DR
Sbjct: 134 EADAQFELALLYALGQGVEKDDAEAVRWYRLAAEQGHMDAQFNLAFMYEEGQGLPQDR 191
>gi|290984619|ref|XP_002675024.1| predicted protein [Naegleria gruberi]
gi|284088618|gb|EFC42280.1| predicted protein [Naegleria gruberi]
Length = 385
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 16/180 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G R+ G GV K+ +KAL+ + K AA+G+T A G MY + + E A Y+ A
Sbjct: 116 GDRYYSGDGVEKSFEKALEWYRKAAAQGNTTAQFHIGKMYEKGEGVPISPEKAFVWYKTA 175
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A LGD A Q G Y + A + + +++ + A+Y L + G GV+
Sbjct: 176 AQLGDAAAQHQTGKMYFWGFGVEKSNDLAFEWISKSANQEYSHAEYDLGNLYYEGNGVEQ 235
Query: 216 NLQEAARWYLRAAEGG--YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+L +A +WY +AA G YV+ + Y GEG+ S+ +A +W ++AA+ G AQ
Sbjct: 236 SLTDAFKWYEKAANQGDAYVQNL--IGAMYQEGEGVAQSYSKAFEWYEKAANQGEVNAQF 293
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G AQ +L + G GV+ + ++A WY +AA G A ++ Y GEG+P
Sbjct: 103 AANDGDNEAQTKLGDRYYSGDGVEKSFEKALEWYRKAAAQGNTTAQFHIGKMYEKGEGVP 162
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+S +A W K AA G AQ + G F
Sbjct: 163 ISPEKAFVWYKTAAQLGDAAAQHQTGKMYF 192
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 26/214 (12%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM 150
W L +A + GK + G GV K+ D A + K A + + A D G +Y+E
Sbjct: 171 WYKTAAQLGDAAAQHQTGKMYFWGFGVEKSNDLAFEWISKSANQEYSHAEYDLGNLYYEG 230
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRG 210
+ E +++ +A K +A+ G Q + G
Sbjct: 231 NGVEQSLT------------------------DAFKWYEKAANQGDAYVQNLIGAMYQEG 266
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GV + +A WY +AA G V A ++ +L Y EG+ S+ ++ +++ A
Sbjct: 267 EGVAQSYSKAFEWYEKAANQGEVNAQFHLALLYQ-EEGVHQSYEKSYNLLEKLASSNDKD 325
Query: 271 AQLEHGLGLFTEGEMMK-AVVYLELATRAGETAA 303
AQ+ G L E + + A+ + E A G A
Sbjct: 326 AQIALGDMLCEEESVREMAISWYEKAANLGNDDA 359
>gi|374328612|ref|YP_005078796.1| Sel1 domain-containing protein repeat-containing protein
[Pseudovibrio sp. FO-BEG1]
gi|359341400|gb|AEV34774.1| Sel1 domain protein repeat-containing protein [Pseudovibrio sp.
FO-BEG1]
Length = 601
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 18/232 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G+ ++ G GV ++ +AL +++ A +G A + +MY D EA ++ Y
Sbjct: 337 GRIYEIGLGVDQDYSEALKWYIRAAEQGVADAQFNLAVMYANGTGISQDLVEA-VAWYHF 395
Query: 163 AAVLGDPAGQFNLGISYL------QEEAV--KLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G P Q+NLG Y Q+EA + + A+ GH AQY++ G GV+
Sbjct: 396 AAKQGHPDAQYNLGFLYATGQGVEQDEATAARWVRLAANQGHAEAQYRIGRAYEDGVGVE 455
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N EAA WY AA + +A + Y+ G G+P +A KW+ AA+ G+ +AQ
Sbjct: 456 QNHTEAANWYYLAATQNHAKAQFTLGRVYAIGLGVPQDEVEAAKWVLHAAERGYLEAQYR 515
Query: 275 HGLGLF----TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
GL + + + +A ++ +A G A + +L+A + A
Sbjct: 516 IGLAFYKGSGVKQNIERAYIWFYIAAENGSKPALKAQKEAADRLNANEIEHA 567
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ F +G G +N KA + F A +G A + G +Y
Sbjct: 301 GRTFTNGIGTPQNHPKAAEKFRLAAEQGHANAQFNLGRIY-------------------- 340
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ LG+ EA+K +A+ G AQ+ LA+ G G+ +L EA WY A
Sbjct: 341 ----EIGLGVDQDYSEALKWYIRAAEQGVADAQFNLAVMYANGTGISQDLVEAVAWYHFA 396
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 279
A+ G+ A YN Y+ G+G+ A +W++ AA+ GH +AQ E G+G+
Sbjct: 397 AKQGHPDAQYNLGFLYATGQGVEQDEATAARWVRLAANQGHAEAQYRIGRAYEDGVGV 454
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 26/225 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ +GV ++ KA F A +G A +Y + KEA Y+
Sbjct: 49 GIIYEEAQGVPQDYAKAAKWFRSAAEQGHVAAQYRIANLYHKGRGVPQSFKEAE-KWYQL 107
Query: 163 AAVLGDPAGQ------FNLGISYLQEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA G P FN G+ Q + A+ L++A G+ AQY+LAL H G+GV
Sbjct: 108 AADKGHPKALSELEYLFNKGLIGPQSDDKVAMWTLHKAK-QGYASAQYRLALLYHDGKGV 166
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ EA +WY RAA G+ A Y+ G+G+ +++A KW +AA G+ AQL
Sbjct: 167 PKDYSEAEKWYRRAASNGHSGAQLELGYMYANGQGVQQDYQEAEKWYLKAAKQGNADAQL 226
Query: 274 EHGLGLFTEG-----EMMKAVVYLELATRAGETAA----DHVKNV 309
E G ++ +G + KA + LA G A D + N+
Sbjct: 227 ELGH-IYADGRGVSRDYEKAKEWYVLAASQGNMGAHRSLDQISNL 270
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 16/217 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA---MVDAGLMYWEMDKKEAAISL-Y 160
L G + GRGV ++ +KA + ++ A++G+ A + + ++ + A I+ Y
Sbjct: 226 LELGHIYADGRGVSRDYEKAKEWYVLAASQGNMGAHRSLDQISNLGEDLKQHYADIAKDY 285
Query: 161 RQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA ++LG ++ +A + A+ GH AQ+ L G G
Sbjct: 286 RKAAEKHLAGFHYSLGRTFTNGIGTPQNHPKAAEKFRLAAEQGHANAQFNLGRIYEIGLG 345
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
VD + EA +WY+RAAE G A +N ++ Y+ G G+ +A W AA GH AQ
Sbjct: 346 VDQDYSEALKWYIRAAEQGVADAQFNLAVMYANGTGISQDLVEAVAWYHFAAKQGHPDAQ 405
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 305
G G E + A ++ LA G A +
Sbjct: 406 YNLGFLYATGQGVEQDEATAARWVRLAANQGHAEAQY 442
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
E K + ++ G +QY+L + +GV + +AA+W+ AAE G+V A Y +
Sbjct: 28 EDFKTISASAEQGDFHSQYKLGIIYEEAQGVPQDYAKAAKWFRSAAEQGHVAAQYRIANL 87
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKA--QLEHGLGLFTEG 283
Y G G+P S ++A KW + AAD GH KA +LE+ LF +G
Sbjct: 88 YHKGRGVPQSFKEAEKWYQLAADKGHPKALSELEY---LFNKG 127
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 83/218 (38%), Gaps = 50/218 (22%)
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGR 211
YR+AA G Q LG Y + V+ YQ A+ G+ AQ +L GR
Sbjct: 177 YRRAASNGHSGAQLELGYMYANGQGVQQDYQEAEKWYLKAAKQGNADAQLELGHIYADGR 236
Query: 212 GVDFNLQEAARWYLRAAEGGYVRA------------------------------------ 235
GV + ++A WY+ AA G + A
Sbjct: 237 GVSRDYEKAKEWYVLAASQGNMGAHRSLDQISNLGEDLKQHYADIAKDYRKAAEKHLAGF 296
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVY 291
Y+ ++ G G P +H +A + + AA+ GH AQ G +GL + + +A+ +
Sbjct: 297 HYSLGRTFTNGIGTPQNHPKAAEKFRLAAEQGHANAQFNLGRIYEIGLGVDQDYSEALKW 356
Query: 292 LELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
A G AD N+ + + T + ++ +W
Sbjct: 357 YIRAAEQG--VADAQFNLAVMYANGTGISQDLVEAVAW 392
>gi|404493110|ref|YP_006717216.1| SEL1 repeat-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77545174|gb|ABA88736.1| SEL1 repeat-containing protein [Pelobacter carbinolicus DSM 2380]
Length = 303
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQAAVLGDPAGQ 172
+ KA +L A +GS +A+ + G MY DK + A+SLY+ AA G Q
Sbjct: 36 DFGKAYSLWLSAAKQGSVVAVYNIGTMY---DKGQGVPQNSKRAVSLYQLAAEKGYVKAQ 92
Query: 173 FNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+NLG+ Y + EAVK L A+ GH QY L G+GV + +EAA+W
Sbjct: 93 YNLGVRYKEGQGVPQDYNEAVKWLRLAAEQGHASGQYLLGAMCCNGKGVLQDYKEAAKWL 152
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG 283
AAE G+ Y Y G+G+ +++A KW++ AA+ GH Q H LG ++ G
Sbjct: 153 RLAAEQGHASGQYLLGAMYCNGKGVLQDYKEAAKWLRLAAEQGHAGGQ--HILGTMYCNG 210
Query: 284 -----EMMKAVVYLELATRAGETAAD-HVKNVILQQLSATSRD 320
+ +A + LA G+ A ++ + +Q L T +
Sbjct: 211 KGVPQDYKEAAKWFRLAAEQGDAKAQLNLGFLYIQGLGVTQSN 253
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 92/189 (48%), Gaps = 15/189 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GV +N +A+ + A +G A + G+ Y E D EA + R
Sbjct: 60 GTMYDKGQGVPQNSKRAVSLYQLAAEKGYVKAQYNLGVRYKEGQGVPQDYNEA-VKWLRL 118
Query: 163 AAVLGDPAGQFNLGI------SYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G +GQ+ LG LQ+ EA K L A+ GH QY L G+GV
Sbjct: 119 AAEQGHASGQYLLGAMCCNGKGVLQDYKEAAKWLRLAAEQGHASGQYLLGAMYCNGKGVL 178
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +EAA+W AAE G+ + Y G+G+P +++A KW + AA+ G KAQL
Sbjct: 179 QDYKEAAKWLRLAAEQGHAGGQHILGTMYCNGKGVPQDYKEAAKWFRLAAEQGDAKAQLN 238
Query: 275 HGLGLFTEG 283
G L+ +G
Sbjct: 239 LGF-LYIQG 246
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R+K G+GV ++ ++A+ A +G G M D KEAA L R
Sbjct: 96 GVRYKEGQGVPQDYNEAVKWLRLAAEQGHASGQYLLGAMCCNGKGVLQDYKEAAKWL-RL 154
Query: 163 AAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G +GQ+ LG Y LQ+ EA K L A+ GH Q+ L G+GV
Sbjct: 155 AAEQGHASGQYLLGAMYCNGKGVLQDYKEAAKWLRLAAEQGHAGGQHILGTMYCNGKGVP 214
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
+ +EAA+W+ AAE G +A N Y G G+ S+ A W
Sbjct: 215 QDYKEAAKWFRLAAEQGDAKAQLNLGFLYIQGLGVTQSNIDAYAW 259
>gi|421656421|ref|ZP_16096728.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
gi|408505405|gb|EKK07128.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
Length = 288
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKE--AAISLYRQAAVLGDPA 170
+ ++ ++ KA++ + A +G A + GL+Y E K + A Y +AA GD A
Sbjct: 76 KDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNEYIKPDYVKAKYWYEKAAAQGDIA 135
Query: 171 -----GQF---NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
G F LGI ++A+K A+ AG AQ LA GRGV N EA++
Sbjct: 136 SLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQ 195
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 278
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ G AQ G G
Sbjct: 196 WYLKAAVQGDIDAQYNLGLMYLLGDGIKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDG 255
Query: 279 LFTEGEMMKAVVYLELATRAGETAA 303
L + + A ++ E + G + A
Sbjct: 256 LGVDKNLSLARIWFEKSAEVGNSYA 280
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 109/263 (41%), Gaps = 20/263 (7%)
Query: 25 KDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHDFASLPFDVLNKIAASFTLPQ-LRA 83
DN R + +S IK + RS K+ +G A V+ P L+A
Sbjct: 28 NDNTRQQ-QSSQTNTNIKNNIDLTDIRS-KAEKGDPEAQYNLGVMYAEGYKDIQPDILKA 85
Query: 84 ASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDA 143
S N + + LL G + ++ + KA + K AA+G ++ +
Sbjct: 86 IEWYTLSANQGYVNAQYNLGLLYMGNEY-----IKPDYVKAKYWYEKAAAQGDIASLNEL 140
Query: 144 GLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQA 191
G Y + + AI Y AA GD Q NL G++ + EA + +A
Sbjct: 141 GNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQWYLKA 200
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
++ G + AQY L L G G+ + +A +W+L AA G A Y+ Y G G+
Sbjct: 201 AVQGDIDAQYNLGLMYLLGDGIKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDGLGVDK 260
Query: 252 SHRQARKWMKRAADCGHGKAQLE 274
+ AR W +++A+ G+ A E
Sbjct: 261 NLSLARIWFEKSAEVGNSYAAQE 283
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 161 RQAAVLGDPAGQFNLGISY------LQEEAVKLLYQASIA---GHVRAQYQLALCLHRGR 211
R A GDP Q+NLG+ Y +Q + +K + +++ G+V AQY L L
Sbjct: 53 RSKAEKGDPEAQYNLGVMYAEGYKDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNE 112
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+ + +A WY +AA G + ++ YS G G+ +++A K+ AA+ G A
Sbjct: 113 YIKPDYVKAKYWYEKAAAQGDIASLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDA 172
Query: 272 QLE------HGLGLFTEGEMMKAVVYLELATRA 298
Q HG G+ T+ ++ + YL+ A +
Sbjct: 173 QTNLATMFLHGRGV-TQNKLEASQWYLKAAVQG 204
>gi|325578342|ref|ZP_08148477.1| Sel1 repeat protein [Haemophilus parainfluenzae ATCC 33392]
gi|419803018|ref|ZP_14328196.1| Sel1 repeat protein [Haemophilus parainfluenzae HK262]
gi|419844813|ref|ZP_14368100.1| Sel1 repeat protein [Haemophilus parainfluenzae HK2019]
gi|325160078|gb|EGC72207.1| Sel1 repeat protein [Haemophilus parainfluenzae ATCC 33392]
gi|385188814|gb|EIF36287.1| Sel1 repeat protein [Haemophilus parainfluenzae HK262]
gi|386416739|gb|EIJ31231.1| Sel1 repeat protein [Haemophilus parainfluenzae HK2019]
Length = 214
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 132 AARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE---- 183
A +G A + GLMY D EAA +R+AA GD Q NLG+ Y + E
Sbjct: 56 ADQGDARAQYNLGLMYRNGNGIQDDVEAA-KWFRKAAENGDVKAQHNLGMMYAKGEGVEQ 114
Query: 184 ----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
AVK +A+ G +R+QY L + + G GV + EAA+WY +AA+ GY A +N
Sbjct: 115 DYVEAVKWYRKAADQGGLRSQYSLGVMYYNGVGVKQDYVEAAKWYRKAADKGYTMAQFNL 174
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
L Y GEG+ + A++W+ +A D G K L +
Sbjct: 175 GLMYRDGEGVKQNRTVAKEWLGKACDSGDKKGCLYY 210
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 24/182 (13%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQ 172
H G+ D+ LD + +G + A+ L++ A GD Q
Sbjct: 21 HSTGLTNTPDQQLDQGFEAVKKGDY----------------QTALKLWKPLADQGDARAQ 64
Query: 173 FNLGISY-----LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
+NLG+ Y +Q+ EA K +A+ G V+AQ+ L + +G GV+ + EA +WY
Sbjct: 65 YNLGLMYRNGNGIQDDVEAAKWFRKAAENGDVKAQHNLGMMYAKGEGVEQDYVEAVKWYR 124
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 285
+AA+ G +R+ Y+ + Y G G+ + +A KW ++AAD G+ AQ GL ++ +GE
Sbjct: 125 KAADQGGLRSQYSLGVMYYNGVGVKQDYVEAAKWYRKAADKGYTMAQFNLGL-MYRDGEG 183
Query: 286 MK 287
+K
Sbjct: 184 VK 185
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G GV ++ +A+ + K A +G + G+MY+ + D EAA YR+
Sbjct: 103 GMMYAKGEGVEQDYVEAVKWYRKAADQGGLRSQYSLGVMYYNGVGVKQDYVEAA-KWYRK 161
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK 186
AA G QFNLG+ Y E VK
Sbjct: 162 AADKGYTMAQFNLGLMYRDGEGVK 185
>gi|290992989|ref|XP_002679116.1| Sel1 repeat domain-containing protein [Naegleria gruberi]
gi|284092731|gb|EFC46372.1| Sel1 repeat domain-containing protein [Naegleria gruberi]
Length = 376
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 17/223 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKK-EAAISLYRQ 162
G +++G+G+ K+L +AL + K A + + + GL+Y+ +D + E + ++ +
Sbjct: 153 GLLYENGQGIEKSLTEALKWYEKAAEQNHVDSQYNMGLIYFSGGEGVDPQLEKSFKIFEK 212
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVD 214
A +G Q LG Y+ V+ YQ ++ H +QY LAL G G++
Sbjct: 213 LANIGLTDAQHILGFLYVNGHGVEQNYQTAVEWFTQSANQNHADSQYNLALLYENGLGIE 272
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WYL+AA +V + ++ Y G G+ S+ A +W +AAD G ++Q
Sbjct: 273 QSDAKAYEWYLKAANQDHVLSQFSVGNMYYDGIGVEQSYESAFQWYLKAADLGDARSQFN 332
Query: 275 HGLGLF----TEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
G+ F E + K++ YL A G T A +VI Q
Sbjct: 333 VGISYFKGQGCEKNVEKSLDYLHQALSNGLTQAQQAIDVIKTQ 375
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 126 DSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG-DPAGQFNLGISYLQ--- 181
+ +K A G+ A GL +++M + E I +AA L PA F LG Y
Sbjct: 70 EELVKAADEGNVSAQYHLGLYHFDMREYEKCIEYCLKAAELDFVPASTF-LGYCYSTLKQ 128
Query: 182 --EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
E++ + +A++ G AQ+ + L G+G++ +L EA +WY +AAE +V + YN
Sbjct: 129 DYEKSFEYYMKAAVKGDEVAQFHVGLLYENGQGIEKSLTEALKWYEKAAEQNHVDSQYNM 188
Query: 240 SLCY-SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG 283
L Y S GEG+ ++ K ++ A+ G AQ H LG L+ G
Sbjct: 189 GLIYFSGGEGVDPQLEKSFKIFEKLANIGLTDAQ--HILGFLYVNG 232
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 40/165 (24%)
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQYQLAL--------------CLHRGRGVDF------- 215
I Y EE VK A+ G+V AQY L L CL + +DF
Sbjct: 65 IQYSHEELVK----AADEGNVSAQYHLGLYHFDMREYEKCIEYCL-KAAELDFVPASTFL 119
Query: 216 ---------NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
+ +++ +Y++AA G A ++ L Y G+G+ S +A KW ++AA+
Sbjct: 120 GYCYSTLKQDYEKSFEYYMKAAVKGDEVAQFHVGLLYENGQGIEKSLTEALKWYEKAAEQ 179
Query: 267 GHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAADHV 306
H +Q GL F+ GE + K+ E G T A H+
Sbjct: 180 NHVDSQYNMGLIYFSGGEGVDPQLEKSFKIFEKLANIGLTDAQHI 224
>gi|119947297|ref|YP_944977.1| Sel1-like repeat-containing serine/threonine protein kinase
[Psychromonas ingrahamii 37]
gi|119865901|gb|ABM05378.1| Tyrosine protein kinase:Serine/threonine protein kinase:Sel1-like
repeat protein [Psychromonas ingrahamii 37]
Length = 448
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 25/260 (9%)
Query: 60 DFASLPFDVLNKIAASFTLPQ-LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVR 118
++A+ + + + A T+PQ R A+ W A G + G+GV
Sbjct: 155 NYANAQYSMGERYAIGNTVPQDYRQAA----QWYRKAAQQGHAAAQYDLGLMYSSGQGVP 210
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFN 174
++ ++A + K A + A GL+Y + A Y +AA G Q+N
Sbjct: 211 QSSEQAAQWYHKAAEQEHAEAQYTLGLIYTSGYGVTQSYKQATYWYNKAAEQGYSDAQYN 270
Query: 175 LGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
+G+ Y EA + +A+ G+ AQY + L + G GV + ++A +WY +
Sbjct: 271 MGLMYNSGNNGFKNYTEATRWYRKAAKQGNADAQYNMGLMYNNGHGVIQDYKQALQWYNK 330
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLF 280
AAE + A YN + Y +G+G+ ++QA W +AA+ GH AQ E+G G+
Sbjct: 331 AAEQQHAGAQYNMGMMYDYGQGVSQDYKQAADWYHKAAEQGHANAQYYLGMMYENGHGVL 390
Query: 281 TEGEMMKAVVYLELATRAGE 300
+ +A ++L LA G+
Sbjct: 391 Q--DYRQAYMWLNLARYNGD 408
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+GV ++ +A + K A + T A GLMY DKK+A Y++
Sbjct: 92 GLMYNNGQGVLQDYKQAAQWYRKAAEQRHTGAQYYLGLMYDNAQGVRQDKKQATY-WYQK 150
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQ--------YQLALCLHRGRGVD 214
AA Q+++G Y V Y+ + + +A Y L L G+GV
Sbjct: 151 AAEQNYANAQYSMGERYAIGNTVPQDYRQAAQWYRKAAQQGHAAAQYDLGLMYSSGQGVP 210
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++AA+WY +AAE + A Y L Y+ G G+ S++QA W +AA+ G+ AQ
Sbjct: 211 QSSEQAAQWYHKAAEQEHAEAQYTLGLIYTSGYGVTQSYKQATYWYNKAAEQGYSDAQYN 270
Query: 275 HGLGLFTEGE 284
GL ++ G
Sbjct: 271 MGL-MYNSGN 279
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A GD Q+NLG Y + Y+ A+ GHV AQY L L + G+GV
Sbjct: 44 AQFGDANAQYNLGTIYANGLGIPQDYKEAALWSRRAAEQGHVGAQYYLGLMYNNGQGVLQ 103
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++AA+WY +AAE + A Y L Y +G+ +QA W ++AA+ + AQ
Sbjct: 104 DYKQAAQWYRKAAEQRHTGAQYYLGLMYDNAQGVRQDKKQATYWYQKAAEQNYANAQYSM 163
Query: 276 G 276
G
Sbjct: 164 G 164
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
A+ G A YN Y+ G G+P +++A W +RAA+ GH AQ GL ++ G+
Sbjct: 44 AQFGDANAQYNLGTIYANGLGIPQDYKEAALWSRRAAEQGHVGAQYYLGL-MYNNGQ 99
>gi|46445788|ref|YP_007153.1| hypothetical protein pc0154 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399429|emb|CAF22878.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 299
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A + G + +GRG+ ++ +A F A +G +A + G++Y ++
Sbjct: 109 DAKAQYKLGVIYANGRGITQSDTEAFKYFKLAADQGHAVAQYNLGVIYDNGQGITQSEQE 168
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
AI Y+ AA GD Q+NLG+ Y EA K A+ G AQY+L +
Sbjct: 169 AIKYYKLAADQGDADAQYNLGVIYANGQGITQSDAEAFKYFKLAADQGDADAQYELGVRY 228
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+G+ + EA +++ AA+ G A YN + YS G G+ S ++A K+ K AAD G
Sbjct: 229 ANGQGITQSDTEAFKYFKLAADQGDADAQYNLEVRYSNGRGVIQSDQEAFKYFKLAADQG 288
Query: 268 HGKAQLEHG 276
AQ E G
Sbjct: 289 DADAQYELG 297
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q+ LG+ Y EA K A+ GH AQY L + G+G+ + Q
Sbjct: 108 GDAKAQYKLGVIYANGRGITQSDTEAFKYFKLAADQGHAVAQYNLGVIYDNGQGITQSEQ 167
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
EA ++Y AA+ G A YN + Y+ G+G+ S +A K+ K AAD G AQ E G+
Sbjct: 168 EAIKYYKLAADQGDADAQYNLGVIYANGQGITQSDAEAFKYFKLAADQGDADAQYELGV- 226
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADH 305
+ G+ + +A Y +LA G+ A +
Sbjct: 227 RYANGQGITQSDTEAFKYFKLAADQGDADAQY 258
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM- 286
A+ G +A Y + Y+ G G+ S +A K+ K AAD GH AQ G+ ++ G+ +
Sbjct: 105 ADQGDAKAQYKLGVIYANGRGITQSDTEAFKYFKLAADQGHAVAQYNLGV-IYDNGQGIT 163
Query: 287 ----KAVVYLELATRAGETAADHVKNVI 310
+A+ Y +LA G+ A + VI
Sbjct: 164 QSEQEAIKYYKLAADQGDADAQYNLGVI 191
>gi|255264741|ref|ZP_05344083.1| Sel1 domain protein repeat-containing protein [Thalassiobium sp.
R2A62]
gi|255107076|gb|EET49750.1| Sel1 domain protein repeat-containing protein [Thalassiobium sp.
R2A62]
Length = 311
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 96 RPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE--- 149
RPL E A R G + +G GV + +A+ + K A +G A + G+MY
Sbjct: 49 RPLAEQGDAAAQFRLGVMYGNGLGVPQEDAEAVSWYRKAAEQGHARAQTNLGVMYENGKG 108
Query: 150 --MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRA 199
D EA +S YR AA GD Q NLG+ Y EAV +A+ GH +A
Sbjct: 109 VTRDYTEA-LSWYRTAAGQGDARAQTNLGVMYRNGKGVPQDYAEAVSWYRKAAEQGHAKA 167
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
QY L + +GV + EA WY +AAE G A + Y G+G+ + +A W
Sbjct: 168 QYNLGFMYYTAQGVPQDYTEAVSWYRKAAEQGSAGAQTTLGVMYENGQGVLQDYTEAAIW 227
Query: 260 MKRAADCGHGKAQLEHGLGLFTEGE 284
++AA+ G AQ G+ ++ G+
Sbjct: 228 YRKAAEQGGALAQNNLGV-MYDNGQ 251
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCL 207
A+ +R A GD A QF LG+ Y QE EAV +A+ GH RAQ L +
Sbjct: 44 ALQEWRPLAEQGDAAAQFRLGVMYGNGLGVPQEDAEAVSWYRKAAEQGHARAQTNLGVMY 103
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV + EA WY AA G RA N + Y G+G+P + +A W ++AA+ G
Sbjct: 104 ENGKGVTRDYTEALSWYRTAAGQGDARAQTNLGVMYRNGKGVPQDYAEAVSWYRKAAEQG 163
Query: 268 HGKAQLEHGLGLFT-EG---EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
H KAQ G +T +G + +AV + A G A V+ + +D
Sbjct: 164 HAKAQYNLGFMYYTAQGVPQDYTEAVSWYRKAAEQGSAGAQTTLGVMYENGQGVLQD 220
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +++G+GV ++ +AL + A +G A + G+MY D E A+S YR+
Sbjct: 100 GVMYENGKGVTRDYTEALSWYRTAAGQGDARAQTNLGVMYRNGKGVPQDYAE-AVSWYRK 158
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVD 214
AA G Q+NLG Y + V Y +++ G AQ L + G+GV
Sbjct: 159 AAEQGHAKAQYNLGFMYYTAQGVPQDYTEAVSWYRKAAEQGSAGAQTTLGVMYENGQGVL 218
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
+ EAA WY +AAE G A N + Y G+G+P + A W ++ G+ K
Sbjct: 219 QDYTEAAIWYRKAAEQGGALAQNNLGVMYDNGQGVPQDYVLAHMWFNISSANGYEK 274
>gi|148264055|ref|YP_001230761.1| Sel1 domain-containing protein [Geobacter uraniireducens Rf4]
gi|146397555|gb|ABQ26188.1| Sel1 domain protein repeat-containing protein [Geobacter
uraniireducens Rf4]
Length = 172
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 89/158 (56%), Gaps = 8/158 (5%)
Query: 159 LYRQAAVLGDPAGQFNLGI-SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
++ AAVL A FN G+ +Y Q++ L + G ++ Y L++ ++G GV+ N
Sbjct: 13 IFSFAAVLSARA-DFNTGLRAYQQKDYATALREFKADGGAQSSYALSIIYYKGEGVEPNR 71
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+E+ +W ++AE G+VRA YN ++ Y G+G+ +A KW ++AA+ GH ++Q GL
Sbjct: 72 KESVKWLRKSAEQGFVRAQYNLAMMYDKGDGVNKDQTEAAKWYRKAAEKGHAQSQFNIGL 131
Query: 278 GLFTEGEMM-----KAVVYLELATRAGETAADHVKNVI 310
++T GE + +AV +L A + G A + V+
Sbjct: 132 -MYTNGEGVGKDKKEAVKWLRKAAKQGHPNAQKLLKVM 168
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G GV N +++ K A +G A + +MY D+ EAA YR+AA
Sbjct: 61 YYKGEGVEPNRKESVKWLRKSAEQGFVRAQYNLAMMYDKGDGVNKDQTEAA-KWYRKAAE 119
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQ 200
G QFN+G+ Y ++EAVK L +A+ GH AQ
Sbjct: 120 KGHAQSQFNIGLMYTNGEGVGKDKKEAVKWLRKAAKQGHPNAQ 162
>gi|397677072|ref|YP_006518610.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397761|gb|AFN57088.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 336
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 75 SFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR 134
S + + +A +L+ ++ N P A+ G + G V + KAL + +
Sbjct: 51 SSNIDKSKAFNLIQQAANKGFAPAEYAL-----GTFYYKGEAVAADKSKALYWYQQAVTH 105
Query: 135 GSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAGQFNLGISYL--------QE 182
G A G MY+ D K ++ LY+QAA G+ Q NLG+ + +E
Sbjct: 106 GDADAAFALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDGAALDKE 165
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+A+ QA+ GH +A+ L + G V + +A WY +AA G A N L
Sbjct: 166 KALYWYQQAAEKGHPQAELILGNLYYNGETVPLDKSKAFEWYQKAANQGNAAAELNLGLM 225
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMM-----KAVVYLELAT 296
Y+ G+G+PL ++ W ++AA+ G AQ E+ LG ++ G+ + KA+ + + A
Sbjct: 226 YAHGDGVPLDKNKSLSWYQKAAE--QGDAQAEYSLGNMYYNGDGIAVDKAKALSWYQQAA 283
Query: 297 RAGETAADHVKNVILQQLSATSRDR 321
G A+ ++ + D+
Sbjct: 284 NHGLAQAELALGIMFYNGEGVTVDK 308
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G + + K++D + + A +G+ A ++ GLM+ D KE A+ Y+QA
Sbjct: 115 GNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDGAALDKEKALYWYQQA 174
Query: 164 AVLGDPAGQFNLGISYLQEEAVKL-------LYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
A G P + LG Y E V L YQ A+ G+ A+ L L G GV
Sbjct: 175 AEKGHPQAELILGNLYYNGETVPLDKSKAFEWYQKAANQGNAAAELNLGLMYAHGDGVPL 234
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++ WY +AAE G +A Y+ Y G+G+ + +A W ++AA+ HG AQ E
Sbjct: 235 DKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGIAVDKAKALSWYQQAAN--HGLAQAEL 292
Query: 276 GLGL-FTEGEMM-----KAVVYLELATRAGETAADH 305
LG+ F GE + A +L+ A G A +
Sbjct: 293 ALGIMFYNGEGVTVDKNNAAYWLKQAANHGNDTAKY 328
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 20/244 (8%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAV 165
++ HG + KA + + A +G A G Y++ + K A+ Y+QA
Sbjct: 45 KYAHGDSSNIDKSKAFNLIQQAANKGFAPAEYALGTFYYKGEAVAADKSKALYWYQQAVT 104
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD F LG Y + ++V L QA+ G+ +AQ L L RG G +
Sbjct: 105 HGDADAAFALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDGAALDK 164
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A WY +AAE G+ +A Y GE +PL +A +W ++AA+ G+ A+L GL
Sbjct: 165 EKALYWYQQAAEKGHPQAELILGNLYYNGETVPLDKSKAFEWYQKAANQGNAAAELNLGL 224
Query: 278 GLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAM 332
++ G+ + K++ + + A G+ A++ + + D+A + SW
Sbjct: 225 -MYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGIAVDKAKAL--SWYQQ 281
Query: 333 PSLH 336
+ H
Sbjct: 282 AANH 285
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
A L G F G G + +KAL + + A +G A + G +Y+ + K
Sbjct: 143 NAQAQLNLGLMFSRGDGAALDKEKALYWYQQAAEKGHPQAELILGNLYYNGETVPLDKSK 202
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKL-------LYQ-ASIAGHVRAQYQLALCL 207
A Y++AA G+ A + NLG+ Y + V L YQ A+ G +A+Y L
Sbjct: 203 AFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMY 262
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ G G+ + +A WY +AA G +A + + GEG+ + A W+K+AA+ G
Sbjct: 263 YNGDGIAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTVDKNNAAYWLKQAANHG 322
Query: 268 HGKAQLE 274
+ A+ +
Sbjct: 323 NDTAKYQ 329
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G V + KA + + K A +G+ A ++ GLMY D K ++S Y++A
Sbjct: 187 GNLYYNGETVPLDKSKAFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKA 246
Query: 164 AVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD +++LG Y + + + QA+ G +A+ L + + G GV
Sbjct: 247 AEQGDAQAEYSLGNMYYNGDGIAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTV 306
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
+ AA W +AA G A Y L +++
Sbjct: 307 DKNNAAYWLKQAANHGNDTAKYQLKLWFNY 336
>gi|288963182|ref|YP_003453461.1| hypothetical protein AZL_f01570 [Azospirillum sp. B510]
gi|288915434|dbj|BAI76917.1| hypothetical protein AZL_f01570 [Azospirillum sp. B510]
Length = 452
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVL 166
F HG G ++ +AL + K AA+ A+ GL + AA+ +R+AA L
Sbjct: 132 FPHGLGAAPDMAEALSWYEKAAAQNHAEAIYHLGLFHTFGQGVPQDYAAAVPWFRKAAEL 191
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q LG Y Q EA+ +++ G+ AQ+ L L G+GV+ + +
Sbjct: 192 GHATAQMKLGSLYAQGNGVAQDMAEALSWYEKSAENGNAGAQFSLGLAWEHGQGVEPDAE 251
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+AA WY RAAE + A + L Y+ G G+P +R+ KW + +A+ G+ AQ LG
Sbjct: 252 KAAHWYRRAAEQDHPVAQLHLGLLYASGRGVPQDYRETLKWCRLSAEKGNSSAQFN--LG 309
Query: 279 LFTEGEMMKAVVYLELAT 296
L + A + E AT
Sbjct: 310 LLHARGLAGAADFGEAAT 327
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 50/209 (23%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAG 195
GL E AA+ + A GD QF +G SY++ E V L +A+ G
Sbjct: 25 GLEAHEAGDHLAALRHWLPLAEQGDAEAQFRVGQSYIRGEGVVRNFGDAAHWLRKAAAQG 84
Query: 196 HVRAQYQLALCLHRGRGVD------------------------------------FNLQE 219
HV AQ+ L L L G G ++ E
Sbjct: 85 HVEAQFTLGLFLANGEGAPQDNAPPVRWQRSAAQHNRAAAEANLALLFPHGLGAAPDMAE 144
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A WY +AA + A+Y+ L ++FG+G+P + A W ++AA+ GH AQ++ G L
Sbjct: 145 ALSWYEKAAAQNHAEAIYHLGLFHTFGQGVPQDYAAAVPWFRKAAELGHATAQMKLG-SL 203
Query: 280 FTEG-----EMMKAVVYLELATRAGETAA 303
+ +G +M +A+ + E + G A
Sbjct: 204 YAQGNGVAQDMAEALSWYEKSAENGNAGA 232
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 78 LPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST 137
+PQ AA++ W L A ++ G + G GV +++ +AL + K A G+
Sbjct: 174 VPQDYAAAV---PWFRKAAELGHATAQMKLGSLYAQGNGVAQDMAEALSWYEKSAENGNA 230
Query: 138 LAMVDAGLMYWEMDK-----KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQAS 192
A GL WE + E A YR+AA P Q +LG+ Y V Y+ +
Sbjct: 231 GAQFSLGLA-WEHGQGVEPDAEKAAHWYRRAAEQDHPVAQLHLGLLYASGRGVPQDYRET 289
Query: 193 IA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+ G+ AQ+ L L RG + EAA WY +AA G V A N L
Sbjct: 290 LKWCRLSAEKGNSSAQFNLGLLHARGLAGAADFGEAATWYRKAAVQGNVNAQVNLGLLLL 349
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQL 273
G G +A W++RAA GH A L
Sbjct: 350 KGTGGRPEVLEAVDWLRRAAAQGHFAAML 378
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++HG+GV + +KA + + A + +A + GL+Y D +E + R
Sbjct: 237 GLAWEHGQGVEPDAEKAAHWYRRAAEQDHPVAQLHLGLLYASGRGVPQDYRET-LKWCRL 295
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G+ + QFNLG+ + + EA +A++ G+V AQ L L L +G G
Sbjct: 296 SAEKGNSSAQFNLGLLHARGLAGAADFGEAATWYRKAAVQGNVNAQVNLGLLLLKGTGGR 355
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
+ EA W RAA G+ AM N + Y G+G ++ QA W + AA
Sbjct: 356 PEVLEAVDWLRRAAAQGHFAAMLNLASLYETGQGGAVNPPQACMWYRVAASV 407
>gi|284006617|emb|CBA71878.1| hypothetical protein containing Sel1 repeats [Arsenophonus
nasoniae]
Length = 260
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Query: 132 AARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ----- 181
A +G+ A + G Y+ D K++ + Y ++A LG+ QF L Y+
Sbjct: 38 AEQGNDKAQYELGEKYFRGQGISQDFKQSVV-WYLKSAELGNADAQFRLATMYVNGFGVR 96
Query: 182 ---EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
++A++ +A+I HVRAQ +A G GV NL EAA W+ +A++GGY A +N
Sbjct: 97 RNYDQAIEWYQRAAIQQHVRAQSNMATMYAHGLGVKRNLPEAAYWFEQASKGGYALAQFN 156
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
L YS G G+ +++A W K AA G+ KAQ G+ ++ EG
Sbjct: 157 LGLMYSIGNGVIKDYKKAVYWFKHAAKQGYAKAQDRLGV-MYAEG 200
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G+++ G+G+ ++ +++ +LK A G+ A MY + AI Y++A
Sbjct: 50 GEKYFRGQGISQDFKQSVVWYLKSAELGNADAQFRLATMYVNGFGVRRNYDQAIEWYQRA 109
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A+ Q N+ Y EA QAS G+ AQ+ L L G GV
Sbjct: 110 AIQQHVRAQSNMATMYAHGLGVKRNLPEAAYWFEQASKGGYALAQFNLGLMYSIGNGVIK 169
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A W+ AA+ GY +A + Y+ G G+ +++A W+ AA G+ ++Q H
Sbjct: 170 DYKKAVYWFKHAAKQGYAKAQDRLGVMYAEGHGVNKDNKKAYAWLATAACNGNKESQKFH 229
Query: 276 G-LG-LFTEGEMMKA 288
+G LF+ EM A
Sbjct: 230 DKIGKLFSVKEMKAA 244
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
I+ + + L Q + G+ +AQY+L RG+G+ + +++ WYL++AE G A
Sbjct: 23 ITNTKSNVITQLQQLAEQGNDKAQYELGEKYFRGQGISQDFKQSVVWYLKSAELGNADAQ 82
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVV 290
+ + Y G G+ ++ QA +W +RAA H +AQ HGLG+ + + +A
Sbjct: 83 FRLATMYVNGFGVRRNYDQAIEWYQRAAIQQHVRAQSNMATMYAHGLGV--KRNLPEAAY 140
Query: 291 YLELATRAG 299
+ E A++ G
Sbjct: 141 WFEQASKGG 149
>gi|384411625|ref|YP_005620990.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931999|gb|AEH62539.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 455
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EA 155
EA+ L G + GRGV +N ++ LD F K A + + A + G Y + + K E
Sbjct: 226 EALTAL--GVFYMTGRGVPQNYERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEK 283
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCL 207
A+ Y++AA GD ++NLG++Y + E + Y+ A+ GHV+AQ +
Sbjct: 284 AVYWYQKAADKGDAEAEYNLGLAYRKGEGISQDDAKAAFWYKKAADQGHVKAQLNMGFAY 343
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
++ RGV + Y +AAE G +A YN ++ Y G G P Q+ W +RAA
Sbjct: 344 YQARGVAQDYARGIFLYRKAAEQGDSKAEYNLAIAYYNGVGEPKDLAQSIYWFQRAAS-- 401
Query: 268 HGKAQLEHGLGLFT---EG---EMMKAVVYLELATRAGETAA 303
HG+ ++ LG F EG + +A+ +LE A G+ A
Sbjct: 402 HGEMSAQYNLGAFYMRGEGVPKDRNEAIFWLEKAAAQGDVEA 443
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++HG GV K+ +KA+ + K A +G A + GL Y D +AA Y++
Sbjct: 268 GNAYRHGYGVPKDDEKAVYWYQKAADKGDAEAEYNLGLAYRKGEGISQDDAKAAF-WYKK 326
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q N+G +Y Q V Y +A+ G +A+Y LA+ + G G
Sbjct: 327 AADQGHVKAQLNMGFAYYQARGVAQDYARGIFLYRKAAEQGDSKAEYNLAIAYYNGVGEP 386
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+L ++ W+ RAA G + A YN Y GEG+P +A W+++AA G +AQ
Sbjct: 387 KDLAQSIYWFQRAASHGEMSAQYNLGAFYMRGEGVPKDRNEAIFWLEKAAAQGDVEAQ 444
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRG 212
+QAA GD A Q NLG++Y AV +A+ G AQY LA G G
Sbjct: 36 KQAAEAGDIAAQSNLGLAYYVGAAVPKDAAMAAFWFEKAASKGFSAAQYNLAGLYATGEG 95
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + ++AA WY +AAE G A YN +L Y G+G+ ++ +A W+K+AAD KA+
Sbjct: 96 VAQSDKQAAFWYEKAAEQGIDEAEYNLALAYEQGKGVEQNYERALFWLKKAADQNFFKAE 155
Query: 273 LEHGL 277
GL
Sbjct: 156 THLGL 160
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 89/213 (41%), Gaps = 38/213 (17%)
Query: 74 ASFTLPQ--LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKG 131
A LP+ +A +L K A R + A + G ++ G GV+++ KA+ + K
Sbjct: 164 AGIMLPRDDKKAVALFMK----ADRQVYYAEAQMALGNAYRRGAGVKQDDQKAVSYYQKA 219
Query: 132 AARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKL 187
A +G A+ G+ Y E + +R+AA A + NLG +Y
Sbjct: 220 ADQGDGEALTALGVFYMTGRGVPQNYERGLDCFRKAADKDVSAAEDNLGNAY-------- 271
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
G GV + ++A WY +AA+ G A YN L Y GE
Sbjct: 272 --------------------RHGYGVPKDDEKAVYWYQKAADKGDAEAEYNLGLAYRKGE 311
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
G+ +A W K+AAD GH KAQL G +
Sbjct: 312 GISQDDAKAAFWYKKAADQGHVKAQLNMGFAYY 344
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L QA+ AG + AQ L L + G V + AA W+ +AA G+ A YN + Y+ GE
Sbjct: 35 LKQAAEAGDIAAQSNLGLAYYVGAAVPKDAAMAAFWFEKAASKGFSAAQYNLAGLYATGE 94
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
G+ S +QA W ++AA+ G +A E+ L L E
Sbjct: 95 GVAQSDKQAAFWYEKAAEQGIDEA--EYNLALAYE 127
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAM-------VDAGLMYWEMDKKEAAISL---- 159
++ G+GV +N ++AL +LK AA + AG+M DKK A+ +
Sbjct: 126 YEQGKGVEQNYERAL-FWLKKAADQNFFKAETHLGLAYQAGIMLPRDDKKAVALFMKADR 184
Query: 160 ---YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
Y +A + A + G+ ++AV +A+ G A L + GRGV N
Sbjct: 185 QVYYAEAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGEALTALGVFYMTGRGVPQN 244
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ + +AA+ A N Y G G+P +A W ++AAD G A+ E+
Sbjct: 245 YERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEKAVYWYQKAAD--KGDAEAEYN 302
Query: 277 LGL-FTEGE 284
LGL + +GE
Sbjct: 303 LGLAYRKGE 311
>gi|444428802|ref|ZP_21224104.1| hypothetical protein B878_22457 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444237967|gb|ELU49604.1| hypothetical protein B878_22457 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 370
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ +G+G+ ++ +A+ + K A +G +A + G+MY D K+A + +AA
Sbjct: 59 YLYGQGITQDDKQAVYWYRKAAEQGDAIAQRNLGVMYSHGRGVAQDDKQA-FYWFHKAAE 117
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G P Q+ LG+ YL +A+ +A+ G V +QY L G+GV +
Sbjct: 118 QGLPKAQYILGLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQDD 177
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A WY +AAE G RA N + YS G G+ +QA W+ +AA+ G AQ H L
Sbjct: 178 KQAVYWYRKAAEQGLARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQ--HNL 235
Query: 278 GLFTE-GEMMKAVVY 291
G + G+ K VY
Sbjct: 236 GFMNQNGQDDKQAVY 250
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 28/225 (12%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + L +A +L G + +G+GV ++ ++A+ F K A +G ++ G +Y+
Sbjct: 116 AEQGLPKAQYIL--GLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGV 173
Query: 150 -MDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQ 200
D K+A + YR+AA G Q NLG+ Y +++AV L++A+ G AQ
Sbjct: 174 TQDDKQA-VYWYRKAAEQGLARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQ 232
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ L G+ + ++A WY +AAE G RA N Y G+GL +QA W
Sbjct: 233 HNLGFMNQNGQ----DDKQAVYWYRKAAEQGLARAQSNLGFMYLHGQGLIQDDKQAVYWF 288
Query: 261 KRAADCGHGKAQLEHGLGL-FTEGEMM-----KAVVYLELATRAG 299
++AA G AQ H LGL + G+ + +A ++L LA G
Sbjct: 289 RKAAKQGFAIAQ--HNLGLVYLNGKGVTQDNAQAYMWLSLARHNG 331
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 16/197 (8%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V + N A+ R+A M G + +G+GV ++ +A+ + K A +G A
Sbjct: 137 VIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQDDKQAVYWYRKAAEQGLARAQ 196
Query: 141 VDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGI----SYLQEEAVKLLYQA 191
+ G+MY D+K+A L++ AA GD Q NLG ++AV +A
Sbjct: 197 SNLGVMYSHGRGVAQDEKQAVYWLHK-AAEQGDAIAQHNLGFMNQNGQDDKQAVYWYRKA 255
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
+ G RAQ L G+G+ + ++A W+ +AA+ G+ A +N L Y G+G+
Sbjct: 256 AEQGLARAQSNLGFMYLHGQGLIQDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVTQ 315
Query: 252 SHRQARKWMKRAADCGH 268
+ QA W+ A G+
Sbjct: 316 DNAQAYMWLSLARHNGY 332
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQ+ LAL G+G+ + ++A WY +AAE G A N + YS G G+ +
Sbjct: 47 GEANAQFNLALMYLYGQGITQDDKQAVYWYRKAAEQGDAIAQRNLGVMYSHGRGVAQDDK 106
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
QA W +AA+ G KAQ GL ++ G+
Sbjct: 107 QAFYWFHKAAEQGLPKAQYILGL-MYLNGQ 135
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQ 190
A D G + + A S + A G+ QFNL + YL ++AV +
Sbjct: 19 ADFDKGFDAYNQGDFKTAYSEWFPLAEQGEANAQFNLALMYLYGQGITQDDKQAVYWYRK 78
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G AQ L + GRGV + ++A W+ +AAE G +A Y L Y G+G+
Sbjct: 79 AAEQGDAIAQRNLGVMYSHGRGVAQDDKQAFYWFHKAAEQGLPKAQYILGLMYLNGQGVI 138
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGL 279
QA W ++AA G G ++ LG
Sbjct: 139 QDDNQAIYWFRKAA--GQGGVMSQYYLGF 165
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + HGRGV ++ +A+ K A +G +A + G M + A+ YR+AA G
Sbjct: 200 GVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQHNLGFMNQNGQDDKQAVYWYRKAAEQG 259
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
Q NLG YL ++AV +A+ G AQ+ L L G+GV + +
Sbjct: 260 LARAQSNLGFMYLHGQGLIQDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVTQDNAQ 319
Query: 220 AARWYLRAAEGGY--VRAMYNT 239
A W A GY + +NT
Sbjct: 320 AYMWLSLARHNGYKNTKENFNT 341
>gi|260753304|ref|YP_003226197.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552667|gb|ACV75613.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 455
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EA 155
EA+ L G + GRGV +N ++ LD F K A + + A + G Y + + K E
Sbjct: 226 EALTAL--GVFYMTGRGVPQNYERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEK 283
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCL 207
A+ Y++AA GD ++NLG++Y + E + Y+ A+ GHV+AQ +
Sbjct: 284 AVYWYQKAADKGDAEAEYNLGLAYRKGEGISQDDAKAAFWYKKAADQGHVKAQLNMGFAY 343
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
++ RGV + Y +AAE G +A YN ++ Y G G P Q+ W +RAA
Sbjct: 344 YQARGVAQDYARGIFLYRKAAEQGDSKAEYNLAIAYYNGVGEPKDLAQSIYWFQRAAS-- 401
Query: 268 HGKAQLEHGLGLF---TEG---EMMKAVVYLELATRAGETAA 303
HG+ ++ LG F EG + +A+ +LE A G+ A
Sbjct: 402 HGEMSAQYNLGAFYMRGEGVPKDRNEAIFWLEKAAAQGDVEA 443
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++HG GV K+ +KA+ + K A +G A + GL Y D +AA Y++
Sbjct: 268 GNAYRHGYGVPKDDEKAVYWYQKAADKGDAEAEYNLGLAYRKGEGISQDDAKAAF-WYKK 326
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q N+G +Y Q V Y +A+ G +A+Y LA+ + G G
Sbjct: 327 AADQGHVKAQLNMGFAYYQARGVAQDYARGIFLYRKAAEQGDSKAEYNLAIAYYNGVGEP 386
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+L ++ W+ RAA G + A YN Y GEG+P +A W+++AA G +AQ
Sbjct: 387 KDLAQSIYWFQRAASHGEMSAQYNLGAFYMRGEGVPKDRNEAIFWLEKAAAQGDVEAQ 444
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRG 212
+QAA GD A Q NLG++Y AV +A+ G AQY LA G G
Sbjct: 36 KQAAEAGDIAAQSNLGLAYYVGAAVPKDAAMAAFWFEKAASKGFSAAQYNLAGLYSTGEG 95
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + ++AA WY +AAE G A YN +L Y G+G+ ++ +A W+K+AAD KA+
Sbjct: 96 VAQSDKQAAFWYEKAAEQGIDEAEYNLALAYEQGKGVEQNYERALFWLKKAADQNFFKAE 155
Query: 273 LEHGL 277
GL
Sbjct: 156 THLGL 160
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 32/177 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G GV+++ KA+ + K A +G A+ G+ Y E + +R+A
Sbjct: 196 GNAYRRGAGVKQDDQKAVSYYQKAADQGDGEALTALGVFYMTGRGVPQNYERGLDCFRKA 255
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
A A + NLG +Y G GV + ++A W
Sbjct: 256 ADKDVSAAEDNLGNAY----------------------------RHGYGVPKDDEKAVYW 287
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
Y +AA+ G A YN L Y GEG+ +A W K+AAD GH KAQL G +
Sbjct: 288 YQKAADKGDAEAEYNLGLAYRKGEGISQDDAKAAFWYKKAADQGHVKAQLNMGFAYY 344
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L QA+ AG + AQ L L + G V + AA W+ +AA G+ A YN + YS GE
Sbjct: 35 LKQAAEAGDIAAQSNLGLAYYVGAAVPKDAAMAAFWFEKAASKGFSAAQYNLAGLYSTGE 94
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
G+ S +QA W ++AA+ G +A E+ L L E
Sbjct: 95 GVAQSDKQAAFWYEKAAEQGIDEA--EYNLALAYE 127
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAM-------VDAGLMYWEMDKKEAAI------ 157
++ G+GV +N ++AL +LK AA + AG+M DKK A+
Sbjct: 126 YEQGKGVEQNYERAL-FWLKKAADQNFFKAETHLGLAYQAGIMLPRDDKKAVALFMKADR 184
Query: 158 -SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
+ Y +A + A + G+ ++AV +A+ G A L + GRGV N
Sbjct: 185 QAYYAEAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGEALTALGVFYMTGRGVPQN 244
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ + +AA+ A N Y G G+P +A W ++AAD G A+ E+
Sbjct: 245 YERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEKAVYWYQKAAD--KGDAEAEYN 302
Query: 277 LGL-FTEGE 284
LGL + +GE
Sbjct: 303 LGLAYRKGE 311
>gi|168334093|ref|ZP_02692306.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 349
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQA 163
G +++G G +KNL KA++ + K A +G+ AM D Y +DK A A++ +RQA
Sbjct: 129 GFCYQYGEGTKKNLTKAVEWYTKAAKQGNLPAMNDLAKCYKLGSGVDKDLAVALNYFRQA 188
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+P Q NL I Y + ++V+ A+ + AQ + + G GV
Sbjct: 189 ANHGNPDAQLNLAICYYEGSGVARSLHKSVEYCTMAAEQNNADAQLMMGMFYSMGEGVTE 248
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
NL A W+ AA+ A + + CY +G G+ R+A ++ +RAA+ H +AQ
Sbjct: 249 NLFTATLWFRAAADHNQPDATFQLANCYQYGLGVEQDSRKAAEYFERAANLNHPEAQ 305
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 108/245 (44%), Gaps = 18/245 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKE--AA 156
A L G+ +++G G RKN+ +A D + K A +G + A + G Y E KK A
Sbjct: 86 APALANLGECYEYGIGTRKNMFRAFDCYNKAAIKGISDAQYNVGFCYQYGEGTKKNLTKA 145
Query: 157 ISLYRQAA------VLGDPAGQFNLGISYLQEEAVKLLY--QASIAGHVRAQYQLALCLH 208
+ Y +AA + D A + LG ++ AV L Y QA+ G+ AQ LA+C +
Sbjct: 146 VEWYTKAAKQGNLPAMNDLAKCYKLGSGVDKDLAVALNYFRQAANHGNPDAQLNLAICYY 205
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GV +L ++ + AAE A + YS GEG+ + A W + AAD
Sbjct: 206 EGSGVARSLHKSVEYCTMAAEQNNADAQLMMGMFYSMGEGVTENLFTATLWFRAAADHNQ 265
Query: 269 GKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAML 324
A + + GL E + KA Y E A A ++ + S D+++
Sbjct: 266 PDATFQLANCYQYGLGVEQDSRKAAEYFERAANLNHPEAQYIIGQYYEY--GISVDKSIF 323
Query: 325 VVDSW 329
+ W
Sbjct: 324 IATCW 328
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKEA---AISLYRQA 163
G+ +++G G+ ++ +A + K A + A+ + G Y + + ++ A Y +A
Sbjct: 57 GECYEYGFGIDEDTSEAFKWYQKSATQSYAPALANLGECYEYGIGTRKNMFRAFDCYNKA 116
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A+ G Q+N+G Y E AV+ +A+ G++ A LA C G GVD
Sbjct: 117 AIKGISDAQYNVGFCYQYGEGTKKNLTKAVEWYTKAAKQGNLPAMNDLAKCYKLGSGVDK 176
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+L A ++ +AA G A N ++CY G G+ S ++ ++ AA+ + AQL
Sbjct: 177 DLAVALNYFRQAANHGNPDAQLNLAICYYEGSGVARSLHKSVEYCTMAAEQNNADAQLMM 236
Query: 276 GLGLFTEGEMMKAVVYLELATRAGETAADH 305
G+ ++ GE + ++ AT AADH
Sbjct: 237 GM-FYSMGEGVTENLF--TATLWFRAAADH 263
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 74/193 (38%), Gaps = 50/193 (25%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISY-----LQEE------------------------- 183
E A + + A+ GDP Q N+G Y + E+
Sbjct: 35 ENAFAEVMELAIKGDPESQNNIGECYEYGFGIDEDTSEAFKWYQKSATQSYAPALANLGE 94
Query: 184 --------------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
A +A+I G AQY + C G G NL +A WY +AA+
Sbjct: 95 CYEYGIGTRKNMFRAFDCYNKAAIKGISDAQYNVGFCYQYGEGTKKNLTKAVEWYTKAAK 154
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----E 284
G + AM + + CY G G+ A + ++AA+ G+ AQL + + EG
Sbjct: 155 QGNLPAMNDLAKCYKLGSGVDKDLAVALNYFRQAANHGNPDAQLNLAI-CYYEGSGVARS 213
Query: 285 MMKAVVYLELATR 297
+ K+V Y +A
Sbjct: 214 LHKSVEYCTMAAE 226
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 58/143 (40%), Gaps = 18/143 (12%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
F I E A + + +I G +Q + C G G+D + EA +WY ++A
Sbjct: 25 NFTTSIEEFAENAFAEVMELAIKGDPESQNNIGECYEYGFGIDEDTSEAFKWYQKSATQS 84
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC-------GHGKAQLEHGL----GLF 280
Y A+ N CY +G G RK M RA DC G AQ G G
Sbjct: 85 YAPALANLGECYEYGIG-------TRKNMFRAFDCYNKAAIKGISDAQYNVGFCYQYGEG 137
Query: 281 TEGEMMKAVVYLELATRAGETAA 303
T+ + KAV + A + G A
Sbjct: 138 TKKNLTKAVEWYTKAAKQGNLPA 160
>gi|290989411|ref|XP_002677331.1| predicted protein [Naegleria gruberi]
gi|284090938|gb|EFC44587.1| predicted protein [Naegleria gruberi]
Length = 227
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + +G+G +++ +KAL + K A +G A GLMY+ + K+ E A +
Sbjct: 7 GLMYYNGQGCQQSFEKALKWYEKSANQGHNEAQFRLGLMYY-LGKRCRQSFEKAFEWVEK 65
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G QF L Y E+A + +++ GH +A Y+L L + G+G
Sbjct: 66 SANQGYDEAQFKLAWMYFNGEGCEKSCEKAFEWYEKSANQGHTKAPYRLGLMYYLGKGCK 125
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY ++A A +N L Y GEG S +A KW K+AA+ H AQ
Sbjct: 126 QSFEKAFEWYEKSANQENAVAKFNLGLMYYNGEGCQQSFEKALKWYKKAANQEHANAQFN 185
Query: 275 HGLGLFT----EGEMMKAVVYLELATRAGETAADHV 306
GL + E KA + E A A HV
Sbjct: 186 LGLMYYNGKGCEKSFEKAFEWYEKAANQEHVNAQHV 221
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 39/223 (17%)
Query: 55 STEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG 114
+ +GH+ A ++ + +A V KS A + EA L W + +G
Sbjct: 31 ANQGHNEAQFRLGLMYYLGKRCRQSFEKAFEWVEKS---ANQGYDEAQFKLAW--MYFNG 85
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAVLGDP 169
G K+ +KA + + K A +G T A GLMY+ + K E A Y ++A +
Sbjct: 86 EGCEKSCEKAFEWYEKSANQGHTKAPYRLGLMYY-LGKGCKQSFEKAFEWYEKSANQENA 144
Query: 170 AGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
+FNLG+ Y + G G + ++A +WY +AA
Sbjct: 145 VAKFNLGLMY----------------------------YNGEGCQQSFEKALKWYKKAAN 176
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ A +N L Y G+G S +A +W ++AA+ H AQ
Sbjct: 177 QEHANAQFNLGLMYYNGKGCEKSFEKAFEWYEKAANQEHVNAQ 219
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQ+ L L + G+G + ++A +WY ++A G+ A + L Y G+ S +A
Sbjct: 1 NAQFYLGLMYYNGQGCQQSFEKALKWYEKSANQGHNEAQFRLGLMYYLGKRCRQSFEKAF 60
Query: 258 KWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGETAADH 305
+W++++A+ G+ +AQ + F E KA + E + G T A +
Sbjct: 61 EWVEKSANQGYDEAQFKLAWMYFNGEGCEKSCEKAFEWYEKSANQGHTKAPY 112
>gi|421695865|ref|ZP_16135462.1| Sel1 repeat protein [Acinetobacter baumannii WC-692]
gi|404564101|gb|EKA69292.1| Sel1 repeat protein [Acinetobacter baumannii WC-692]
Length = 285
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAIS--LYRQAAVLGD-P 169
+ ++ ++ KA++ + A +G A + GL+Y E K + A + Y +AA+ GD P
Sbjct: 73 KDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNEHIKPDYAKAKYWYEKAALQGDIP 132
Query: 170 A----GQF---NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
+ G F LGI ++A+K A+ AG AQ L GRGV N +EA++
Sbjct: 133 SLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLGTMFLHGRGVTQNKEEASQ 192
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 278
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ G AQ G G
Sbjct: 193 WYLKAAIQGDIDAQYNLGLMYLLGDGIKQDYSQAQKWFLAAANQGESNAQFHLGKIYKDG 252
Query: 279 LFTEGEMMKAVVYLELATRAGETAA 303
L + + A + E + AG + A
Sbjct: 253 LGVDKNLSLARTWFEKSAEAGNSYA 277
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G++++ KA+ +L A G + A + G M+ KE A Y +A
Sbjct: 138 GNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLGTMFLHGRGVTQNKEEASQWYLKA 197
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A+ GD Q+NLG+ YL + +K Y A+ G AQ+ L G GVD
Sbjct: 198 AIQGDIDAQYNLGLMYLLGDGIKQDYSQAQKWFLAAANQGESNAQFHLGKIYKDGLGVDK 257
Query: 216 NLQEAARWYLRAAEGG 231
NL A W+ ++AE G
Sbjct: 258 NLSLARTWFEKSAEAG 273
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLAL 205
+ AI Y AA GD Q NLG +L +EEA + +A+I G + AQY L L
Sbjct: 152 QKAIKYYLDAANAGDSDAQTNLGTMFLHGRGVTQNKEEASQWYLKAAIQGDIDAQYNLGL 211
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G G+ + +A +W+L AA G A ++ Y G G+ + AR W +++A+
Sbjct: 212 MYLLGDGIKQDYSQAQKWFLAAANQGESNAQFHLGKIYKDGLGVDKNLSLARTWFEKSAE 271
Query: 266 CGHGKAQLE 274
G+ A E
Sbjct: 272 AGNSYAAQE 280
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 161 RQAAVLGDPAGQFNLGISY------LQEEAVKLLYQASIA---GHVRAQYQLALCLHRGR 211
R A GDP Q+NLG+ Y +Q + +K + +++ G+V AQY L L
Sbjct: 50 RSKAEKGDPEAQYNLGVMYAEGYKDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNE 109
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+ + +A WY +AA G + ++ YS G G+ +++A K+ AA+ G A
Sbjct: 110 HIKPDYAKAKYWYEKAALQGDIPSLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDA 169
Query: 272 QLEHGLGLFTEG 283
Q G +F G
Sbjct: 170 QTNLGT-MFLHG 180
>gi|237748454|ref|ZP_04578934.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379816|gb|EEO29907.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 544
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EA 155
+A+V+L G + G+ + +N KA+ + + A + + A + G Y++ +DK
Sbjct: 119 KALVML--GNLHRKGQCIAENYPKAIAYWKRAAVQNNVWAYHNLGTAYYDGIGVDKNPHE 176
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ +++AA LG P Q NLG Y +EAV ++++ G QY L +
Sbjct: 177 AVRWWKKAAELGFPESQNNLGALYNDGNGVDRDYQEAVFWYRKSALQGDELGQYNLGVAY 236
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ GRG+ + EA WY ++AE Y +A +N + Y GEG+ + +A W K+AA+ G
Sbjct: 237 YYGRGIKKDFSEAVSWYKKSAEQDYAQAQHNLGVTYYEGEGIKKDYAKAVYWWKKAAEQG 296
Query: 268 HGKAQLEHGLGLFTEG 283
++Q G+ + EG
Sbjct: 297 IPQSQYNLGIA-YEEG 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G GV ++ +A+ + K A +G L + G+ Y+ + D EA +S Y++
Sbjct: 197 GALYNDGNGVDRDYQEAVFWYRKSALQGDELGQYNLGVAYYYGRGIKKDFSEA-VSWYKK 255
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
+A Q NLG++Y + E +K Y +A+ G ++QY L + G G +
Sbjct: 256 SAEQDYAQAQHNLGVTYYEGEGIKKDYAKAVYWWKKAAEQGIPQSQYNLGIAYEEGWGAE 315
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N + A WY +AAE G+ A + Y +G G+ + + KW+++AA G +AQ
Sbjct: 316 KNPENAVFWYRKAAEQGHADAQNRLGIAYRYGTGVRKNPALSVKWLEKAAKQGLARAQFN 375
Query: 275 HG----LGLFTEGEMMKAVVYLELATRAGETAA 303
G +G KAV + A G T A
Sbjct: 376 LGKTFYIGAGINKNTDKAVYWFIKAANQGFTEA 408
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G + G G++K+ KA+ + K A +G + + G+ Y W +K E A+ YR+A
Sbjct: 269 GVTYYEGEGIKKDYAKAVYWWKKAAEQGIPQSQYNLGIAYEEGWGAEKNPENAVFWYRKA 328
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q LGI+Y +VK L +A+ G RAQ+ L + G G++
Sbjct: 329 AEQGHADAQNRLGIAYRYGTGVRKNPALSVKWLEKAAKQGLARAQFNLGKTFYIGAGINK 388
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N +A W+++AA G+ A + Y G+ + + ++ W+K+AA+ KAQ
Sbjct: 389 NTDKAVYWFIKAANQGFTEAQAYIGMIYFKGKYVAKNEKKGFYWLKKAAEKDSAKAQAFL 448
Query: 276 GLGLFTEGEMMK 287
G L+ G +K
Sbjct: 449 G-ALYIAGNEVK 459
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 149 EMDKK--EAAISLYRQAAVLGDPAGQFNLGI------SYLQEEAVKLLY--QASIAGHVR 198
E D+K E +S R+AA G+ Q+ G+ Q+ V +L+ +A+ H +
Sbjct: 60 ENDEKGDEETVSWCRKAAKSGNAEAQYLFGMLVYDGRGVQQDNCVAMLWWMKAAEQNHAK 119
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
A L +G+ + N +A ++ RAA V A +N Y G G+ + +A +
Sbjct: 120 ALVMLGNLHRKGQCIAENYPKAIAYWKRAAVQNNVWAYHNLGTAYYDGIGVDKNPHEAVR 179
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEG 283
W K+AA+ G ++Q G L+ +G
Sbjct: 180 WWKKAAELGFPESQNNLG-ALYNDG 203
>gi|421626736|ref|ZP_16067564.1| Sel1 repeat protein [Acinetobacter baumannii OIFC098]
gi|408695053|gb|EKL40612.1| Sel1 repeat protein [Acinetobacter baumannii OIFC098]
Length = 301
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKE-- 154
EA+ +L + G G + + KAL+ F K A GS+ AM+ GL+Y ++ KK+
Sbjct: 55 EAIFVL--ASMYATGEGEKLDQKKALELFEKSAQLGSSNAMLQLGLIYRNGNDLIKKDDL 112
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALC 206
A+ + Q A G+P+ NLG+SY + +A K Q++ G +++Q +A
Sbjct: 113 KALKWFEQGAKKGNPSAIHNLGVSYYKGLGITEDKAKAFKYFSQSAELGLLQSQVIVAGL 172
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
L+ G GV + ++A W L+AA G V + N L Y G+G+ A+KW ++AA+
Sbjct: 173 LYNGEGVTKDHKKAFEWALKAANQGDVESQNNIGLAYENGDGVAKGPVLAKKWFEKAANN 232
Query: 267 GHGKAQLEHGLGLF----TEGEMMKAVVYLELATRAGETA 302
G Q L F E K++ Y E A A A
Sbjct: 233 GSVLGQYNLALKYFDGNGVEQNFSKSIEYAEKAANAQNKA 272
>gi|158341666|ref|NP_808794.2| protein sel-1 homolog 1 precursor [Rattus norvegicus]
gi|149025308|gb|EDL81675.1| Sel1 (suppressor of lin-12) 1 homolog (C. elegans), isoform CRA_a
[Rattus norvegicus]
Length = 793
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 386 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 445
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 446 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 505
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 506 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 565
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+ + AVV YL LA + E A + IL Q AT
Sbjct: 566 KDDDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 602
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 261 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 320
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 321 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 380
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 381 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 440
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 441 ADMGNPVGQ--SGLGM 454
>gi|114797087|ref|YP_759395.1| putative localization factor protein PodJ [Hyphomonas neptunium ATCC
15444]
gi|114737261|gb|ABI75386.1| putative localization factor protein PodJ [Hyphomonas neptunium ATCC
15444]
Length = 1238
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 167 GDPAGQFNLGISYLQ----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
G+ Q+ L S+L + A+ LL +A++ G AQY L +G GVD ++ +A
Sbjct: 981 GNAIAQYQLAQSHLTQNDLDSAIPLLRRAALKGAAPAQYDLGKLYEQGIGVDQDMIQARS 1040
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 278
+AAE G+V AMY+ +L + GEG L A +W ++AAD G AQ G+ G
Sbjct: 1041 LISKAAEAGHVGAMYDLALFMAEGEGGELDDLGAVEWFRKAADHGFLDAQYNLGVMFAEG 1100
Query: 279 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSL 335
+ E ++ +A+ + ELA+R G++ A + +L + M D W PS+
Sbjct: 1101 IGAEQDLAEALYWFELASRQGDSGATLEVRSLSSRLPPETVREVMETADLWSETPSI 1157
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLG 176
+ +LD A+ + A +G+ A D G +Y + +G
Sbjct: 995 TQNDLDSAIPLLRRAALKGAAPAQYDLGKLYEQ------------------------GIG 1030
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+ +A L+ +A+ AGHV A Y LAL + G G + + A W+ +AA+ G++ A
Sbjct: 1031 VDQDMIQARSLISKAAEAGHVGAMYDLALFMAEGEGGELDDLGAVEWFRKAADHGFLDAQ 1090
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
YN + ++ G G +A W + A+ G A LE
Sbjct: 1091 YNLGVMFAEGIGAEQDLAEALYWFELASRQGDSGATLE 1128
>gi|60360536|dbj|BAD90512.1| mKIAA4137 protein [Mus musculus]
Length = 832
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 425 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 484
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 485 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 544
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 545 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 604
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+ + AVV YL LA + E A + IL Q AT
Sbjct: 605 KDEDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 641
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 300 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 359
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 360 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 419
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 420 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 479
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 480 ADMGNPVGQ--SGLGM 493
>gi|329848146|ref|ZP_08263174.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
gi|328843209|gb|EGF92778.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
Length = 304
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 25/185 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A LR F G GV +N KAL + K A +G+ +A + G++Y +
Sbjct: 52 DAEAQLRLADNFFSGNGVDQNYGKALAWYEKAALQGNVVAQTELGVLYGK---------- 101
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
LG++ ++A++ A+ G+ AQY L + G GV ++
Sbjct: 102 --------------GLGVAVDYDKALRWTRMAADKGYAGAQYNLGVAYDYGMGVTPDVAM 147
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A WYL+AAE GY A +N Y GEG+ S+ QA W RAAD + AQ G+ L
Sbjct: 148 AFAWYLKAAEQGYGVAQFNVGTMYESGEGVEQSNPQAFTWYARAADQAYAPAQYNLGV-L 206
Query: 280 FTEGE 284
+ EG+
Sbjct: 207 YLEGK 211
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q L ++ V Y +A++ G+V AQ +L + +G GV +
Sbjct: 51 GDAEAQLRLADNFFSGNGVDQNYGKALAWYEKAALQGNVVAQTELGVLYGKGLGVAVDYD 110
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A RW AA+ GY A YN + Y +G G+ A W +AA+ G+G AQ G
Sbjct: 111 KALRWTRMAADKGYAGAQYNLGVAYDYGMGVTPDVAMAFAWYLKAAEQGYGVAQFNVGT- 169
Query: 279 LFTEGE 284
++ GE
Sbjct: 170 MYESGE 175
>gi|344925131|ref|ZP_08778592.1| Sel1 domain-containing protein [Candidatus Odyssella
thessalonicensis L13]
Length = 900
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAA 156
A+ + + + G GV N ++A + + A +G A GL Y+E + + A
Sbjct: 257 AVAQYKLAECYHKGHGVAANPEQAFTWYKQLADQGHAKAHHGVGLCYYEGQGVIRDRRQA 316
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCLH 208
+++AA Q+ L Y + E V YQ A+ H +AQYQLA
Sbjct: 317 FDWFKKAADKKYAEAQYQLAQCYHEGEGVAQDSAQAFAWYQKAAEQNHAKAQYQLAGFYA 376
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+G+ VD NL +A Y RAA GY A Y + CY G G+ RQA W +AA H
Sbjct: 377 KGQIVDQNLAQAFACYYRAASQGYAEAQYQLAECYHKGHGVAADSRQAVAWYHKAAAQNH 436
Query: 269 GKAQLEHGLGLFT-EGEMMKAVVYLELATRAGE 300
KAQ+E L +T G V + L +A E
Sbjct: 437 AKAQVELALCYYTGHGVTADPVQAISLCQKAAE 469
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 13/183 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQAAVLGDP 169
G GV K++ + K AA+G A + G Y + ++K A S Y++AA G
Sbjct: 162 GEGVNKDVKQGYAWAEKAAAQGYAKAQLILGNCYLTGFGIEKDAGKAFSWYQKAAHQGAA 221
Query: 170 AGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+ L G++ +AV +A+ + AQY+LA C H+G GV N ++A
Sbjct: 222 EAQYKLAECYDKGYGVAADPAQAVAYYQKAADQNYAVAQYKLAECYHKGHGVAANPEQAF 281
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
WY + A+ G+ +A + LCY G+G+ RQA W K+AAD + +AQ + +
Sbjct: 282 TWYKQLADQGHAKAHHGVGLCYYEGQGVIRDRRQAFDWFKKAADKKYAEAQYQLAQ-CYH 340
Query: 282 EGE 284
EGE
Sbjct: 341 EGE 343
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 89/185 (48%), Gaps = 17/185 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGD 168
G GV K+L+K L K A +G A Y+ D K+ + +AA G
Sbjct: 126 GYGVTKDLEKGLALCEKAAEQGHVAAQFIVARSYFRGEGVNKDVKQG-YAWAEKAAAQGY 184
Query: 169 PAGQFNLGISYL-----QEEAVKLL--YQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
Q LG YL +++A K YQ A+ G AQY+LA C +G GV + +A
Sbjct: 185 AKAQLILGNCYLTGFGIEKDAGKAFSWYQKAAHQGAAEAQYKLAECYDKGYGVAADPAQA 244
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL- 279
+Y +AA+ Y A Y + CY G G+ + QA W K+ AD GH KA HG+GL
Sbjct: 245 VAYYQKAADQNYAVAQYKLAECYHKGHGVAANPEQAFTWYKQLADQGHAKAH--HGVGLC 302
Query: 280 FTEGE 284
+ EG+
Sbjct: 303 YYEGQ 307
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G+GV ++ +A D F K A + A Y E + A + Y++AA
Sbjct: 303 YYEGQGVIRDRRQAFDWFKKAADKKYAEAQYQLAQCYHEGEGVAQDSAQAFAWYQKAAEQ 362
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
Q+ L Y + +A Y+A+ G+ AQYQLA C H+G GV + +
Sbjct: 363 NHAKAQYQLAGFYAKGQIVDQNLAQAFACYYRAASQGYAEAQYQLAECYHKGHGVAADSR 422
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+A WY +AA + +A +LCY G G+ QA ++AA+ G +AQ G
Sbjct: 423 QAVAWYHKAAAQNHAKAQVELALCYYTGHGVTADPVQAISLCQKAAEQGLAEAQCRLG 480
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G+ V +NL +A + + A++G A Y + D ++A ++ Y +AA
Sbjct: 375 YAKGQIVDQNLAQAFACYYRAASQGYAEAQYQLAECYHKGHGVAADSRQA-VAWYHKAAA 433
Query: 166 LGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
Q L + Y +A+ L +A+ G AQ +L C G GV+ N+
Sbjct: 434 QNHAKAQVELALCYYTGHGVTADPVQAISLCQKAAEQGLAEAQCRLGNCYLSGYGVERNV 493
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A W+ +AA+ G A Y + CY GEG+ QA +W K+A + + A G
Sbjct: 494 EKAFEWFRKAADQGLAEAQYRVAYCYDNGEGVAADPVQAFEWYKKATEQRYTDAYYPVGC 553
Query: 278 ----GLFTEGEMMKAVVYLELATRA 298
G E +++AV Y + +A
Sbjct: 554 CYLNGKGVERSLIEAVKYFVQSNQA 578
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 164 AVLGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A DP Q+ L IS QE+A + +A+ GH AQ++L+ C G GV
Sbjct: 72 AEANDPQAQYELAEIYKKGEIISEDQEKAFEWFKRAADQGHAEAQFRLSNCYVIGYGVTK 131
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+L++ +AAE G+V A + + Y GEG+ +Q W ++AA G+ KAQL
Sbjct: 132 DLEKGLALCEKAAEQGHVAAQFIVARSYFRGEGVNKDVKQGYAWAEKAAAQGYAKAQLIL 191
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADH 305
G G E + KA + + A G A +
Sbjct: 192 GNCYLTGFGIEKDAGKAFSWYQKAAHQGAAEAQY 225
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
LL QA A +AQY+LA +G + + ++A W+ RAA+ G+ A + S CY G
Sbjct: 68 LLLQAE-ANDPQAQYELAEIYKKGEIISEDQEKAFEWFKRAADQGHAEAQFRLSNCYVIG 126
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQL 273
G+ + ++AA+ GH AQ
Sbjct: 127 YGVTKDLEKGLALCEKAAEQGHVAAQF 153
>gi|220905150|ref|YP_002480462.1| Sel1 domain-containing protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869449|gb|ACL49784.1| Sel1 domain protein repeat-containing protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 346
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAA-ISLYRQ 162
W G GV +N +A F K A +G +A + G +Y + K EAA I Y +
Sbjct: 104 WATALASGDGVPRNYREAARWFRKAAEQGLAMAQYNLGYLYAHGRGVSKDEAAAIDWYSR 163
Query: 163 AAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G + Q++LG +YL + A +A+ H +AQ LA GRG
Sbjct: 164 AANQGLASAQYSLGWTYLNSKGENQSDTKAAHWFEKAAEQDHPKAQNNLAFMYAEGRGYA 223
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A +WY RAAE GY A YN Y G G+P + QA W ++AA+ AQ
Sbjct: 224 QDPAKAVQWYTRAAEQGYAEAQYNLGFMYEQGRGVPQDYNQAVDWYRKAAEQNEAAAQYS 283
Query: 275 HGLGLFTEG-----EMMKAVVYLELATRAGETAADHV 306
GL ++ +G + +A + LA + G+ A V
Sbjct: 284 LGL-MYDQGTGVPRNLSEANRWYNLAAKNGDPDARSV 319
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ + A + A+ G V A A L G GV N +EAARW+ +AAE G A
Sbjct: 77 GVKKNRTRAAEFFRLAAEKGDVSAMNSWATALASGDGVPRNYREAARWFRKAAEQGLAMA 136
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 294
YN Y+ G G+ A W RAA+ G AQ G L ++GE
Sbjct: 137 QYNLGYLYAHGRGVSKDEAAAIDWYSRAANQGLASAQYSLGWTYLNSKGENQSDTKAAHW 196
Query: 295 ATRAGETAADHVK 307
+A E DH K
Sbjct: 197 FEKAAEQ--DHPK 207
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+EAV+LL G+ A Y + + G+GV N AA ++ AAE G V AM + +
Sbjct: 47 DEAVRLLKPLVDGGNAEALYVMGRLILDGKGVKKNRTRAAEFFRLAAEKGDVSAMNSWAT 106
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
+ G+G+P ++R+A +W ++AA+ G AQ G L+ G
Sbjct: 107 ALASGDGVPRNYREAARWFRKAAEQGLAMAQYNLGY-LYAHG 147
>gi|254448217|ref|ZP_05061679.1| Sel1 domain protein repeat-containing protein [gamma
proteobacterium HTCC5015]
gi|198262084|gb|EDY86367.1| Sel1 domain protein repeat-containing protein [gamma
proteobacterium HTCC5015]
Length = 281
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G G+ +N K++ + K A +G +A GL Y + E A+ + +A
Sbjct: 39 GLMYEVGMGITQNHGKSVYWYQKAARQGFAIAQNSLGLAYLNGEGTLQSYEKAVHWFEKA 98
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G Q+NLG Y + + V ++ + + G+ AQ L GR V
Sbjct: 99 AQQGYAVAQYNLGSRYAKGQGVPQSHKKATSWFKKSAHQGNASAQNNLGAQYLFGRSVPQ 158
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A W+ AA+ G YN Y+ G+G+P SH QA W K+AA GH AQ
Sbjct: 159 SYEKAMYWFEMAAQKGEPTGQYNLGDMYAQGQGVPQSHEQAAYWYKKAAQQGHTPAQNNL 218
Query: 276 GLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
G+ ++ +GE + A + LA AG A + N + + ++AT +A + W
Sbjct: 219 GV-MYIKGEGVPQSQVIAAKWFILAKMAGNDKAANNLNRVQKTMTATEISKAERLAQLW 276
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
+KN +KA A RG+ A + GLMY + +GI
Sbjct: 13 KKNYEKAKSLLEPLAKRGAVEAQFNLGLMY------------------------EVGMGI 48
Query: 178 SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
+ ++V +A+ G AQ L L G G + ++A W+ +AA+ GY A Y
Sbjct: 49 TQNHGKSVYWYQKAARQGFAIAQNSLGLAYLNGEGTLQSYEKAVHWFEKAAQQGYAVAQY 108
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLE 293
N Y+ G+G+P SH++A W K++A G+ AQ G G KA+ + E
Sbjct: 109 NLGSRYAKGQGVPQSHKKATSWFKKSAHQGNASAQNNLGAQYLFGRSVPQSYEKAMYWFE 168
Query: 294 LATRAGETAADH 305
+A + GE +
Sbjct: 169 MAAQKGEPTGQY 180
>gi|260654117|ref|ZP_05859607.1| TPR repeat protein [Jonquetella anthropi E3_33 E1]
gi|260631102|gb|EEX49296.1| TPR repeat protein [Jonquetella anthropi E3_33 E1]
Length = 264
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 106 RWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLY 160
R + + G+ GV ++ +A F K A G T A MY + A+ Y
Sbjct: 17 RLAQAYDEGKDGVAEDKAQAAKWFTKSAEGGYTNAQFSLARMYHTGNGVPVDLAKAVKWY 76
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRG 212
+AA GD Q NL + Y E V + +A+ AG+ AQ+ LAL + R
Sbjct: 77 TKAAQAGDEVAQNNLAVMYDTGEGVPIDKTKAFEWYTKAAQAGYAPAQHNLALMHYSSRS 136
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ +A WY +AAE G A YN +L Y GEG+P +A +W +AA+ GH AQ
Sbjct: 137 SAADQAKAIEWYTKAAEAGETEAQYNLALTYVSGEGVPQDVVKAAEWFTKAAESGHADAQ 196
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 319
L L G+ E + ++A + A AG A +++ I+ L ++
Sbjct: 197 LNLALLNWNGVGVERDKVRAYYWACRADLAGADKAVGLRSEIVGSLDKETK 247
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 168 DPAGQFNL---------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
D A Q+ L G++ + +A K +++ G+ AQ+ LA H G GV +L
Sbjct: 11 DSASQYRLAQAYDEGKDGVAEDKAQAAKWFTKSAEGGYTNAQFSLARMYHTGNGVPVDLA 70
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A +WY +AA+ G A N ++ Y GEG+P+ +A +W +AA G+ AQ H L
Sbjct: 71 KAVKWYTKAAQAGDEVAQNNLAVMYDTGEGVPIDKTKAFEWYTKAAQAGYAPAQ--HNLA 128
Query: 279 LF------TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW--R 330
L + + KA+ + A AGET A + N+ L +S + ++ W +
Sbjct: 129 LMHYSSRSSAADQAKAIEWYTKAAEAGETEAQY--NLALTYVSGEGVPQDVVKAAEWFTK 186
Query: 331 AMPSLH 336
A S H
Sbjct: 187 AAESGH 192
>gi|62510950|sp|Q80Z70.2|SE1L1_RAT RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
Length = 794
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+ + AVV YL LA + E A + IL Q AT
Sbjct: 567 KDDDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|375147850|ref|YP_005010291.1| Sel1 domain-containing protein repeat-containing protein [Niastella
koreensis GR20-10]
gi|361061896|gb|AEW00888.1| Sel1 domain protein repeat-containing protein [Niastella koreensis
GR20-10]
Length = 370
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 96/218 (44%), Gaps = 18/218 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G GV + +A+ F + A G+ AM + G +Y + + AI Y++A
Sbjct: 75 GLMYQRGNGVTIDYKQAMAYFQQAAKDGNISAMSNIGYLYDKALGVTEDNLTAIKWYKKA 134
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A GD FNL Y E V + Y +A+ G + + G GVD
Sbjct: 135 ADAGDLDALFNLAWMYDHGEGVSIDYPKAMQLYKKAAEGGSGSSMNNIGWLYEHGEGVDT 194
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA +WY +AAE G A+ N Y GEG+ + ++QA W ++A G +
Sbjct: 195 SFNEAMKWYKKAAENGEPEAINNVGYMYENGEGVNIDYKQAMDWYQKAVKAGSSRGMNNI 254
Query: 276 GL----GLFTEGEMMKAVVYLELATRAGETAADHVKNV 309
GL GL + + A+V+ AG D + NV
Sbjct: 255 GLLYQKGLGVKVDYKTAMVWYNKGANAG--CGDAMNNV 290
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---- 155
+A+ L W + HG GV + KA+ + K A GS +M + G +Y + +
Sbjct: 141 DALFNLAW--MYDHGEGVSIDYPKAMQLYKKAAEGGSGSSMNNIGWLYEHGEGVDTSFNE 198
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCL 207
A+ Y++AA G+P N+G Y E V + Y+ ++ AG R + L
Sbjct: 199 AMKWYKKAAENGEPEAINNVGYMYENGEGVNIDYKQAMDWYQKAVKAGSSRGMNNIGLLY 258
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G GV + + A WY + A G AM N Y GEG+ ++++ A +W K+ A
Sbjct: 259 QKGLGVKVDYKTAMVWYNKGANAGCGDAMNNVGWLYQNGEGVAVNYKTAMEWYKKGAQ-- 316
Query: 268 HGKAQLEHGLGLF-TEGEMMKA 288
+ A + LG F G+ +KA
Sbjct: 317 YESADAMNNLGWFYANGKGVKA 338
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 20/196 (10%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGIS 178
AL + A GS+ A+ GLMY +D K+A ++ ++QAA G+ + N+G
Sbjct: 55 ALRVWKNAAEAGSSDAVNFLGLMYQRGNGVTIDYKQA-MAYFQQAAKDGNISAMSNIGYL 113
Query: 179 Y-----LQEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y + E+ A+K +A+ AG + A + LA G GV + +A + Y +AAEG
Sbjct: 114 YDKALGVTEDNLTAIKWYKKAADAGDLDALFNLAWMYDHGEGVSIDYPKAMQLYKKAAEG 173
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM---- 286
G +M N Y GEG+ S +A KW K+AA+ G +A G ++ GE +
Sbjct: 174 GSGSSMNNIGWLYEHGEGVDTSFNEAMKWYKKAAENGEPEAINNVGY-MYENGEGVNIDY 232
Query: 287 -KAVVYLELATRAGET 301
+A+ + + A +AG +
Sbjct: 233 KQAMDWYQKAVKAGSS 248
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++HG GV + ++A+ + K A G A+ + G MY +D K+A + Y++
Sbjct: 183 GWLYEHGEGVDTSFNEAMKWYKKAAENGEPEAINNVGYMYENGEGVNIDYKQA-MDWYQK 241
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVD 214
A G G N+G+ Y + VK+ Y+ ++ AG A + G GV
Sbjct: 242 AVKAGSSRGMNNIGLLYQKGLGVKVDYKTAMVWYNKGANAGCGDAMNNVGWLYQNGEGVA 301
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N + A WY + A+ AM N Y+ G+G+ + A W +A G A+
Sbjct: 302 VNYKTAMEWYKKGAQYESADAMNNLGWFYANGKGVKANDSLAIDWYNKAIKAGSADAK 359
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 173 FNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+N G++Y +E A+++ A+ AG A L L RG GV + ++A ++ +AA
Sbjct: 40 YNEGLAYYNKEYYLDALRVWKNAAEAGSSDAVNFLGLMYQRGNGVTIDYKQAMAYFQQAA 99
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA------QLEHGLGL 279
+ G + AM N Y G+ + A KW K+AAD G A +HG G+
Sbjct: 100 KDGNISAMSNIGYLYDKALGVTEDNLTAIKWYKKAADAGDLDALFNLAWMYDHGEGV 156
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 87 VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V S+N+A++ ++A + G +++G GV + +A+D + K GS+ M
Sbjct: 192 VDTSFNEAMKWYKKAAENGEPEAINNVGYMYENGEGVNIDYKQAMDWYQKAVKAGSSRGM 251
Query: 141 VDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAG 195
+ GL+Y + +D K A + Y + A G N+G Y E V + Y+ ++
Sbjct: 252 NNIGLLYQKGLGVKVDYKTAMV-WYNKGANAGCGDAMNNVGWLYQNGEGVAVNYKTAMEW 310
Query: 196 HVR-AQYQLALCLHR-------GRGVDFNLQEAARWYLRAAEGG 231
+ + AQY+ A ++ G+GV N A WY +A + G
Sbjct: 311 YKKGAQYESADAMNNLGWFYANGKGVKANDSLAIDWYNKAIKAG 354
>gi|418530669|ref|ZP_13096592.1| Sel1 domain-containing protein [Comamonas testosteroni ATCC 11996]
gi|371452388|gb|EHN65417.1| Sel1 domain-containing protein [Comamonas testosteroni ATCC 11996]
Length = 252
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
GRG KN D+A F+ A +G + + GLMY E A+ YR AA GD
Sbjct: 50 GRGGPKNDDEAAKWFMLAAKQGHAESQANMGLMYGRGRGVPQSDEEAVKWYRLAAEQGDA 109
Query: 170 AGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
G FNL + Y EEAV+L A HV +Q L GRGV + +EA
Sbjct: 110 DGLFNLAVMYDDGRGVAENPEEAVRLYRLAVAQNHVSSQSNLGYMYDHGRGVAQDSKEAF 169
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+WY+ AAE G + +N Y+ G G+ S QA W AA G
Sbjct: 170 KWYMIAAEQGDANSQFNVGSMYALGRGVSQSWPQAYFWALLAAKDGE 216
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L Q + AG +AQ++LA GRG N EAA+W++ AA+ G+ + N L Y G
Sbjct: 28 LLQKAQAGDAQAQFKLAAVYLTGRGGPKNDDEAAKWFMLAAKQGHAESQANMGLMYGRGR 87
Query: 248 GLPLSHRQARKWMKRAADCG 267
G+P S +A KW + AA+ G
Sbjct: 88 GVPQSDEEAVKWYRLAAEQG 107
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 80/217 (36%), Gaps = 48/217 (22%)
Query: 162 QAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
Q A GD QF L YL +EA K A+ GH +Q + L RGRGV
Sbjct: 30 QKAQAGDAQAQFKLAAVYLTGRGGPKNDDEAAKWFMLAAKQGHAESQANMGLMYGRGRGV 89
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSL-------------------------------- 241
+ +EA +WY AAE G ++N ++
Sbjct: 90 PQSDEEAVKWYRLAAEQGDADGLFNLAVMYDDGRGVAENPEEAVRLYRLAVAQNHVSSQS 149
Query: 242 ----CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLE 293
Y G G+ ++A KW AA+ G +Q G LG +A +
Sbjct: 150 NLGYMYDHGRGVAQDSKEAFKWYMIAAEQGDANSQFNVGSMYALGRGVSQSWPQAYFWAL 209
Query: 294 LATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
LA + GE + + +I ++L R + V W+
Sbjct: 210 LAAKDGEKDSARQQEIIAKKLKPAQRAKIQQQVQEWK 246
>gi|338720030|ref|XP_001494914.3| PREDICTED: LOW QUALITY PROTEIN: protein sel-1 homolog 1 isoform 1
[Equus caballus]
Length = 794
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
G GV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GXGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A--VLGD--------------PAGQFNLGIS--YLQEEAVKLLYQASIAGHVRAQYQLA- 204
A V D P N G++ L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGVNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH G GV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGXGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|283856194|ref|YP_161868.2| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|283775190|gb|AAV88757.2| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 276
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 13/190 (6%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAV 165
R GR V+ D K A RG A G Y + E A+S Y+++A
Sbjct: 22 RIGVGRVVKMTRDGLKSPLQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQKSAS 81
Query: 166 LGDPAGQF--------NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G Q LG+++ ++AV +A+ G AQY LA+ + GRGV N
Sbjct: 82 QGYAPAQAALGYAYSSGLGVTHDDQQAVSFFQKAANQGLAEAQYSLAIAYYTGRGVTQNY 141
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A+ W+ R+A G+V A + + Y G G+P +A W +AAD G+ AQ GL
Sbjct: 142 EQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPEDDDRALFWFHKAADKGYADAQYNLGL 201
Query: 278 GLFTEGEMMK 287
++ EG+++K
Sbjct: 202 -IYHEGKVVK 210
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 23/243 (9%)
Query: 87 VCKSWNDALR-PLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA 139
V K D L+ PL+ +A G + G+ V K+ ++A+ + K A++G A
Sbjct: 28 VVKMTRDGLKSPLQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQKSASQGYAPA 87
Query: 140 MVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY-QASI- 193
G Y + A+S +++AA G Q++L I+Y V Y QAS
Sbjct: 88 QAALGYAYSSGLGVTHDDQQAVSFFQKAANQGLAEAQYSLAIAYYTGRGVTQNYEQASFW 147
Query: 194 ------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
G V AQ+ L + G G+ + A W+ +AA+ GY A YN L Y G+
Sbjct: 148 FQRSANQGFVPAQFYLGVMYRNGAGIPEDDDRALFWFHKAADKGYADAQYNLGLIYHEGK 207
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
+ +QA W ++AA+ G +A+ G+ G + + KA +LE A G++ A
Sbjct: 208 VVKKDEKQATFWYQQAANQGLVEAEFNLGIAYLKGQGVQKDKDKATFWLEKAADKGDSHA 267
Query: 304 DHV 306
V
Sbjct: 268 QDV 270
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
+A S KS + P + A+ G + G GV + +A+ F K A +G A
Sbjct: 71 QAVSWYQKSASQGYAPAQAAL-----GYAYSSGLGVTHDDQQAVSFFQKAANQGLAEAQY 125
Query: 142 DAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLY 189
+ Y+ E A ++++A G QF LG+ Y + A+ +
Sbjct: 126 SLAIAYYTGRGVTQNYEQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPEDDDRALFWFH 185
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+A+ G+ AQY L L H G+ V + ++A WY +AA G V A +N + Y G+G+
Sbjct: 186 KAADKGYADAQYNLGLIYHEGKVVKKDEKQATFWYQQAANQGLVEAEFNLGIAYLKGQGV 245
Query: 250 PLSHRQARKWMKRAADCGHGKAQ 272
+A W+++AAD G AQ
Sbjct: 246 QKDKDKATFWLEKAADKGDSHAQ 268
>gi|189501859|ref|YP_001957576.1| hypothetical protein Aasi_0432 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497300|gb|ACE05847.1| hypothetical protein Aasi_0432 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1002
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 27/233 (11%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G+ +++GR +K+ A + K A +G+ +A A S+Y +A
Sbjct: 747 RLGRIYENGRVAKKDEQTAAQWYEKAAIQGNRVAQY-------------ALCSMYERAVR 793
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G P Q++LG Y +EAV+ +A+ G+ AQYQL +G+ N
Sbjct: 794 QGCPKVQYSLGKMYYNGWGVDKNYQEAVEWYQKAANQGYAEAQYQLGYMYEYPKGLLQNY 853
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+EAA+WY AA+ G + A + +G G+ ++A +W ++AA+ GH AQL G+
Sbjct: 854 KEAAKWYQAAAKQGIITAQVKLADMSYYGLGVDKDEQEAFRWFQKAANQGHAAAQLVLGV 913
Query: 278 GLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ G + +KAV ++E A G+ A V ++ ++D V
Sbjct: 914 -MYVNGRGVTKDDVKAVEWIEKAVNQGDAEAQLVLGIMYANGRGVNKDEEQAV 965
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK------KEAAISLYR 161
GK + +G GV KN +A++ + K A +G A G MY E K KEAA Y+
Sbjct: 804 GKMYYNGWGVDKNYQEAVEWYQKAANQGYAEAQYQLGYMY-EYPKGLLQNYKEAA-KWYQ 861
Query: 162 QAAVLGDPAGQ--------FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA G Q + LG+ ++EA + +A+ GH AQ L + GRGV
Sbjct: 862 AAAKQGIITAQVKLADMSYYGLGVDKDEQEAFRWFQKAANQGHAAAQLVLGVMYVNGRGV 921
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ +A W +A G A + Y+ G G+ QA W ++AAD G AQ
Sbjct: 922 TKDDVKAVEWIEKAVNQGDAEAQLVLGIMYANGRGVNKDEEQAVAWYQKAADQGSAVAQ 980
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEM--DKKE-AAISLYRQA 163
G +++ +G+ +N +A + A +G A V A + Y+ + DK E A +++A
Sbjct: 840 GYMYEYPKGLLQNYKEAAKWYQAAAKQGIITAQVKLADMSYYGLGVDKDEQEAFRWFQKA 899
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G A Q LG+ Y+ +AV+ + +A G AQ L + GRGV+
Sbjct: 900 ANQGHAAAQLVLGVMYVNGRGVTKDDVKAVEWIEKAVNQGDAEAQLVLGIMYANGRGVNK 959
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+ ++A WY +AA+ G A Y Y G G+
Sbjct: 960 DEEQAVAWYQKAADQGSAVAQYMLEQRYENGRGV 993
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG---------- 231
E+A+ +A H AQY+L GR + Q AA+WY +AA G
Sbjct: 727 EKAILWYQRAGNQNHTEAQYRLGRIYENGRVAKKDEQTAAQWYEKAAIQGNRVAQYALCS 786
Query: 232 -YVRAM--------YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
Y RA+ Y+ Y G G+ ++++A +W ++AA+ G+ +AQ + G
Sbjct: 787 MYERAVRQGCPKVQYSLGKMYYNGWGVDKNYQEAVEWYQKAANQGYAEAQYQLG 840
>gi|71064936|ref|YP_263663.1| hypothetical protein Psyc_0360 [Psychrobacter arcticus 273-4]
gi|71037921|gb|AAZ18229.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 305
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 99/192 (51%), Gaps = 13/192 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
G ++ G+GV+++ A + + K A +G + + G +Y + + SL Y++A
Sbjct: 82 GSLYRDGKGVQQDFSLAAEWYQKAAEQGHIASQFNLGSLYRDGKGVQQDFSLAAEWYQKA 141
Query: 164 AVLGDPAGQFNLGISY-----LQEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G A QFNLG Y +Q++ AVK +A+ GH+ +Q+ L G+ V
Sbjct: 142 AEQGHIASQFNLGSLYQDGKGIQQDFALAVKWYQKAAEQGHIASQFNLGSLYQEGKDVQQ 201
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ AA+WY +AAE G++ + +N Y G+ + A KW ++AA+ GH +Q
Sbjct: 202 DFALAAKWYQKAAEQGHIASQFNLGSLYQEGKDVQQDFALAAKWYQKAAEQGHIASQFNL 261
Query: 276 GLGLFTEGEMMK 287
G L+ EG+ ++
Sbjct: 262 G-SLYQEGKGLR 272
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G ++ G+GV+++ A + + K A +G + + G +Y + + A+ Y++A
Sbjct: 118 GSLYRDGKGVQQDFSLAAEWYQKAAEQGHIASQFNLGSLYQDGKGIQQDFALAVKWYQKA 177
Query: 164 AVLGDPAGQFNLGISY-----LQEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G A QFNLG Y +Q++ A K +A+ GH+ +Q+ L G+ V
Sbjct: 178 AEQGHIASQFNLGSLYQEGKDVQQDFALAAKWYQKAAEQGHIASQFNLGSLYQEGKDVQQ 237
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ AA+WY +AAE G++ + +N Y G+GL QA++W +A D G
Sbjct: 238 DFALAAKWYQKAAEQGHIASQFNLGSLYQEGKGLRQDKNQAKEWFGKACDNG 289
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Query: 159 LYRQAAVLGDPAGQFNLGISY-----LQEE---AVKLLYQASIAGHVRAQYQLALCLHRG 210
LY++AA GD QFNLG++Y +Q++ AVK +A+ GH+ +Q+ L G
Sbjct: 29 LYQKAAHNGDAEAQFNLGLTYKDGQDVQQDNSMAVKWYQKAAEQGHIASQFNLGSLYRDG 88
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
+GV + AA WY +AAE G++ + +N Y G+G+ A +W ++AA+ GH
Sbjct: 89 KGVQQDFSLAAEWYQKAAEQGHIASQFNLGSLYRDGKGVQQDFSLAAEWYQKAAEQGHIA 148
Query: 271 AQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
+Q G L+ +G+ ++ AV + + A G A+ + Q+ +D A+
Sbjct: 149 SQFNLG-SLYQDGKGIQQDFALAVKWYQKAAEQGHIASQFNLGSLYQEGKDVQQDFAL 205
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 128 FLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISY---- 179
+ K A G A + GL Y + A+ Y++AA G A QFNLG Y
Sbjct: 30 YQKAAHNGDAEAQFNLGLTYKDGQDVQQDNSMAVKWYQKAAEQGHIASQFNLGSLYRDGK 89
Query: 180 -LQEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
+Q++ A + +A+ GH+ +Q+ L G+GV + AA WY +AAE G++ +
Sbjct: 90 GVQQDFSLAAEWYQKAAEQGHIASQFNLGSLYRDGKGVQQDFSLAAEWYQKAAEQGHIAS 149
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVV 290
+N Y G+G+ A KW ++AA+ GH +Q G L+ EG+ ++ A
Sbjct: 150 QFNLGSLYQDGKGIQQDFALAVKWYQKAAEQGHIASQFNLG-SLYQEGKDVQQDFALAAK 208
Query: 291 YLELATRAGETAADHVKNVILQQLSATSRDRAM 323
+ + A G A+ + Q+ +D A+
Sbjct: 209 WYQKAAEQGHIASQFNLGSLYQEGKDVQQDFAL 241
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
KL +A+ G AQ+ L L G+ V + A +WY +AAE G++ + +N Y
Sbjct: 27 TKLYQKAAHNGDAEAQFNLGLTYKDGQDVQQDNSMAVKWYQKAAEQGHIASQFNLGSLYR 86
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAG 299
G+G+ A +W ++AA+ GH +Q G L+ +G+ ++ A + + A G
Sbjct: 87 DGKGVQQDFSLAAEWYQKAAEQGHIASQFNLG-SLYRDGKGVQQDFSLAAEWYQKAAEQG 145
Query: 300 ETAADHVKNVILQQLSATSRDRAMLV 325
A+ + Q +D A+ V
Sbjct: 146 HIASQFNLGSLYQDGKGIQQDFALAV 171
>gi|399115780|emb|CCG18583.1| conserved hypothetical Sel1 repeat protein [Taylorella
equigenitalis 14/56]
Length = 341
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 20/247 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA- 155
+A G + G GV +N A+ + K AA+G A+ + G MY + +DK +
Sbjct: 93 DAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYMMGYGVDKNYSK 152
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
AI LY +AA F+LG Y + E+ +L +A+ H AQY L +
Sbjct: 153 AIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTNELYEKAANKNHTEAQYNLGIHY 212
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV + ++A WY +AAE + A N + Y GEG+ + A +W K+AA
Sbjct: 213 QFGKGVTKDDKKAMEWYKKAAEADHYLAQRNLAYLYEKGEGVEHDYDLAMEWYKKAAKHN 272
Query: 268 HGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
AQ E+G G F A+++ LA E A K+ I ++ + D+
Sbjct: 273 DPVAQNNLGLLYEYGKGTFK--NWKNAIMWYTLACDNHEKAGCEGKDRIEAKIKKENEDK 330
Query: 322 AMLVVDS 328
+++
Sbjct: 331 NKTKIEN 337
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 44/160 (27%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ----------------------------------- 181
+S A GD QF LG Y +
Sbjct: 82 LSTIEDRANKGDAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYM 141
Query: 182 ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
+A++L +A+ A + L +G GV+ +L++ Y +AA +
Sbjct: 142 MGYGVDKNYSKAIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTNELYEKAANKNH 201
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A YN + Y FG+G+ ++A +W K+AA+ H AQ
Sbjct: 202 TEAQYNLGIHYQFGKGVTKDDKKAMEWYKKAAEADHYLAQ 241
>gi|188025664|ref|ZP_02959400.2| hypothetical protein PROSTU_01244 [Providencia stuartii ATCC 25827]
gi|188022670|gb|EDU60710.1| Sel1 repeat protein [Providencia stuartii ATCC 25827]
Length = 327
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 113/237 (47%), Gaps = 25/237 (10%)
Query: 87 VCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V +SW +A+ +EA + + G ++ G GV K+ +AL A +G A
Sbjct: 76 VKQSWQEAIHWFKEAAMQGSLPAQYQLGLIYEKGEGVEKSRSQALHWLTLAAEQGEADAQ 135
Query: 141 VDAGLMYWEMDK-----KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKL 187
G +Y E + +++A+ ++ AA G P+ Q LG Y EEA+K
Sbjct: 136 HQLGWLYMEESESNHASQQSALKWFKAAAEQGHPSAQNMLGWLYENGATGKPEIEEALKW 195
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+A+ G+ A L +G+ + + ++A ++++AAE G A N L Y G+
Sbjct: 196 YQEAAKQGNAFALNNLGWFYWQGKSGEVDKEKALNYFIQAAELGDKDAQLNLGLMYYQGD 255
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV-----VYLELATRAG 299
G+PLS QA+KW RAA+ G+ AQ G L +GE+ A Y ELA + G
Sbjct: 256 GVPLSIEQAQKWFMRAAEQGNAYAQYNLGW-LMQKGEVENASPYAARYYFELACKGG 311
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 136 STLAMVDA------GLMYWEMDKKE--AAISLYRQAAVLGDPAGQF--------NLGISY 179
+T ++++A GL Y+ D A ++QAA GDP Q LG+
Sbjct: 19 TTTSVINAKKSFTEGLTYYNADPPNYIQAAKYFQQAAEYGDPEAQLYLAALYESGLGVKQ 78
Query: 180 LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+EA+ +A++ G + AQYQL L +G GV+ + +A W AAE G A +
Sbjct: 79 SWQEAIHWFKEAAMQGSLPAQYQLGLIYEKGEGVEKSRSQALHWLTLAAEQGEADAQHQL 138
Query: 240 SLCY-SFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
Y E S + A KW K AA+ GH AQ
Sbjct: 139 GWLYMEESESNHASQQSALKWFKAAAEQGHPSAQ 172
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 18/151 (11%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEA 155
A +L W +++G + +++AL + + A +G+ A+ + G YW E+DK E
Sbjct: 171 AQNMLGW--LYENGATGKPEIEEALKWYQEAAKQGNAFALNNLGWFYWQGKSGEVDK-EK 227
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A++ + QAA LGD Q NLG+ Y Q E+A K +A+ G+ AQY L +
Sbjct: 228 ALNYFIQAAELGDKDAQLNLGLMYYQGDGVPLSIEQAQKWFMRAAEQGNAYAQYNLGWLM 287
Query: 208 HRGRGVDFNLQEAARWYLR-AAEGGYVRAMY 237
+G V+ AAR+Y A +GG +A +
Sbjct: 288 QKGE-VENASPYAARYYFELACKGGLEKACF 317
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 178 SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
+Y+Q A K QA+ G AQ LA G GV + QEA W+ AA G + A Y
Sbjct: 43 NYIQ--AAKYFQQAAEYGDPEAQLYLAALYESGLGVKQSWQEAIHWFKEAAMQGSLPAQY 100
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYL 292
L Y GEG+ S QA W+ AA+ G AQ + G E E A+ +
Sbjct: 101 QLGLIYEKGEGVEKSRSQALHWLTLAAEQGEADAQHQLGWLYMEESESNHASQQSALKWF 160
Query: 293 ELATRAGETAADHV 306
+ A G +A ++
Sbjct: 161 KAAAEQGHPSAQNM 174
>gi|84875513|ref|NP_001034178.1| protein sel-1 homolog 1 isoform a precursor [Mus musculus]
gi|13878771|sp|Q9Z2G6.2|SE1L1_MOUSE RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
gi|12836653|dbj|BAB23750.1| unnamed protein product [Mus musculus]
Length = 790
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 383 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 442
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 443 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 502
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 503 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 562
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+ + AVV YL LA + E A + IL Q AT
Sbjct: 563 KDEDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 599
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 258 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 317
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 318 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 377
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 378 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 437
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 438 ADMGNPVGQ--SGLGM 451
>gi|323455533|gb|EGB11401.1| hypothetical protein AURANDRAFT_20899, partial [Aureococcus
anophagefferens]
Length = 272
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ G+G +L KA F + AA+G A+ +Y + +DKK+A LYR AA
Sbjct: 93 YRDGQGTEVDLGKARYWFERAAAKGDEDAIAHLAELYEDGSGVKLDKKKAE-QLYRAAAD 151
Query: 166 LGDPAGQFNLGISYLQ-----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
GD Q NLG+ +L EEA + A+ G+ + L C G G + +EA
Sbjct: 152 RGDAVAQNNLGL-FLDSEEKFEEAFRYFVLAANQGYTSGETNLGCCCRDGDGTEQRFEEA 210
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
AR+Y AA G YN CY GEG + +AR W +RAA G+ KA
Sbjct: 211 ARYYALAANQGCTDGEYNLGWCYQHGEGTEVDLGKARYWYERAAAKGNEKA 261
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 135 GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE----EAV 185
G +AM + G +Y + +DKK+AA L+R A GD Q NLG S E EAV
Sbjct: 13 GDVVAMTNLGTLYQKGLGVKLDKKKAA-RLFRMGADRGDAIAQNNLGASLHSEKKFEEAV 71
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
+ A+ G+ + L +C G+G + +L +A W+ RAA G A+ + + Y
Sbjct: 72 RYFVLAANQGYTSGEGCLGVCYRDGQGTEVDLGKARYWFERAAAKGDEDAIAHLAELYED 131
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 304
G G+ L ++A + + AAD G AQ GL L +E + +A Y LA G T+ +
Sbjct: 132 GSGVKLDKKKAEQLYRAAADRGDAVAQNNLGLFLDSEEKFEEAFRYFVLAANQGYTSGE 190
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G GV+ + KA + A RG +A + GL +K E A + AA G +
Sbjct: 129 YEDGSGVKLDKKKAEQLYRAAADRGDAVAQNNLGLFLDSEEKFEEAFRYFVLAANQGYTS 188
Query: 171 GQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
G+ NLG EEA + A+ G +Y L C G G + +L +A
Sbjct: 189 GETNLGCCCRDGDGTEQRFEEAARYYALAANQGCTDGEYNLGWCYQHGEGTEVDLGKARY 248
Query: 223 WYLRAAEGGYVRAMYN 238
WY RAA G +A++N
Sbjct: 249 WYERAAAKGNEKAIHN 264
>gi|312882386|ref|ZP_07742127.1| Sel1 domain-containing protein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369786|gb|EFP97297.1| Sel1 domain-containing protein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 342
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALC 206
A ++Y A G+P Q LG+ Y + + V Y+ +I G+ AQ+ L
Sbjct: 26 AKTNVYLDQARQGEPIDQLKLGVMYERGDGVVQDYKQAIYWYRKAAEQGNADAQFHLGFM 85
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
+ +GRGVD N EAA+WY +AAE G+V++ N + Y GEG+ + Q+ W ++AA+
Sbjct: 86 IAKGRGVDKNFIEAAKWYRKAAEQGHVKSQNNLGIMYEEGEGVAQDYTQSVYWYRKAAEQ 145
Query: 267 GHGKAQLEHG-LGLFTEG 283
G+ K+Q + G + LF +G
Sbjct: 146 GYAKSQDKLGFMYLFGKG 163
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGD 168
G G + N+ +L A +G + + G+MY D + AI YR+AA G+
Sbjct: 22 EGTGAKTNV------YLDQARQGEPIDQLKLGVMYERGDGVVQDYKQAIYWYRKAAEQGN 75
Query: 169 PAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
QF+LG + EA K +A+ GHV++Q L + G GV + ++
Sbjct: 76 ADAQFHLGFMIAKGRGVDKNFIEAAKWYRKAAEQGHVKSQNNLGIMYEEGEGVAQDYTQS 135
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
WY +AAE GY ++ Y FG+G+P QA W ++AA+ G+ Q
Sbjct: 136 VYWYRKAAEQGYAKSQDKLGFMYLFGKGVPQFDTQAFYWFRKAAEQGYASGQ 187
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G+GV + +A F K A +G + G MY + EAA YR++A GD
Sbjct: 161 GKGVPQFDTQAFYWFRKAAEQGYASGQNNLGYMYALGKGVSKNDTEAAY-WYRKSAEGGD 219
Query: 169 PAGQFNLGISY-----LQEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
GQ N+G Y + ++ K Y + + G V AQ L + ++GR V N +A
Sbjct: 220 VVGQSNIGHMYYAGLGVPQDDTKAAYWFKKGAEQGGVSAQGNLGVMYYQGRSVPQNYAKA 279
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
WY +AAE G + N + Y G+G+P +QA W ++AA GH AQ
Sbjct: 280 LYWYRKAAERGDASSQNNIGVLYEEGKGVPQDDKQALYWYRKAAAQGHKVAQ 331
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 17/191 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLYR 161
G ++ G GV ++ +++ + K A +G + G MY + D + A +R
Sbjct: 119 GIMYEEGEGVAQDYTQSVYWYRKAAEQGYAKSQDKLGFMYLFGKGVPQFDTQ--AFYWFR 176
Query: 162 QAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA G +GQ NLG Y EA +++ G V Q + + G GV
Sbjct: 177 KAAEQGYASGQNNLGYMYALGKGVSKNDTEAAYWYRKSAEGGDVVGQSNIGHMYYAGLGV 236
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +AA W+ + AE G V A N + Y G +P ++ +A W ++AA+ G +Q
Sbjct: 237 PQDDTKAAYWFKKGAEQGGVSAQGNLGVMYYQGRSVPQNYAKALYWYRKAAERGDASSQN 296
Query: 274 EHGLGLFTEGE 284
G+ L+ EG+
Sbjct: 297 NIGV-LYEEGK 306
>gi|404378894|ref|ZP_10983970.1| hypothetical protein HMPREF9021_01187 [Simonsiella muelleri ATCC
29453]
gi|294483273|gb|EFG30959.1| hypothetical protein HMPREF9021_01187 [Simonsiella muelleri ATCC
29453]
Length = 889
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G G+ +N+ +A + + A G A + G +Y D +AA + +
Sbjct: 596 GMAYAKGLGIMQNMVEASYWYTQAAKLGYVQAQNNLGELYTSGEGVNQDYAQAA-EWFTK 654
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD Q+NLG++Y ++A++ A+ G+ AQY L + G+GV
Sbjct: 655 AADQGDAIAQYNLGLAYAYGRGVEQSDKKALEYTLLAAEQGNAIAQYNLGVRYESGQGVV 714
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N EAA+WY +AAE G A N L Y+ G G+ +A W ++AAD GH AQ
Sbjct: 715 QNYTEAAKWYTKAAEQGNPSAQNNLGLLYADGNGVEKDTDKAADWCEKAADQGHADAQFN 774
Query: 275 HGL 277
GL
Sbjct: 775 LGL 777
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 36/206 (17%)
Query: 109 KRFKHGRGVRKN--LDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQA 163
++F+H +N D A + F A +G A G++Y W +++ E RQA
Sbjct: 523 QQFQHALTSYQNQDFDNAFNEFKALAEQGHAEAQYYLGILYAQGWGVEQDE------RQA 576
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
AV YL+ A+ GH AQY L + +G G+ N+ EA+ W
Sbjct: 577 AVW------------YLK---------AADQGHAAAQYNLGMAYAKGLGIMQNMVEASYW 615
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GL 279
Y +AA+ GYV+A N Y+ GEG+ + QA +W +AAD G AQ GL G
Sbjct: 616 YTQAAKLGYVQAQNNLGELYTSGEGVNQDYAQAAEWFTKAADQGDAIAQYNLGLAYAYGR 675
Query: 280 FTEGEMMKAVVYLELATRAGETAADH 305
E KA+ Y LA G A +
Sbjct: 676 GVEQSDKKALEYTLLAAEQGNAIAQY 701
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAISLYR 161
G+ + G GV ++ +A + F K A +G +A + GL Y + DKK +L
Sbjct: 632 GELYTSGEGVNQDYAQAAEWFTKAADQGDAIAQYNLGLAYAYGRGVEQSDKKALEYTLL- 690
Query: 162 QAAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA G+ Q+NLG+ Y +Q EA K +A+ G+ AQ L L G GV
Sbjct: 691 -AAEQGNAIAQYNLGVRYESGQGVVQNYTEAAKWYTKAAEQGNPSAQNNLGLLYADGNGV 749
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ + +AA W +AA+ G+ A +N L Y+ RQA W +AA+ GH AQ
Sbjct: 750 EKDTDKAADWCEKAADQGHADAQFNLGLLYAQSTDTEEGQRQAAAWYAKAAEQGHSGAQN 809
Query: 274 EHGLGLFT----EGEMMKAVVYLELATRAGETAADH 305
+ F E + KA+V+ A G AA +
Sbjct: 810 NLAIAYFNGWGVEQDHEKAIVWYRAAAEQGVVAAQY 845
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 84/185 (45%), Gaps = 16/185 (8%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEA 155
A+ G R++ G+GV +N +A + K A +G+ A + GL+Y E D +A
Sbjct: 697 AIAQYNLGVRYESGQGVVQNYTEAAKWYTKAAEQGNPSAQNNLGLLYADGNGVEKDTDKA 756
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ----EEAVKLLYQASIA----GHVRAQYQLALCL 207
A +AA G QFNLG+ Y Q EE + GH AQ LA+
Sbjct: 757 A-DWCEKAADQGHADAQFNLGLLYAQSTDTEEGQRQAAAWYAKAAEQGHSGAQNNLAIAY 815
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV+ + ++A WY AAE G V A Y L + + P ++ A +W + A G
Sbjct: 816 FNGWGVEQDHEKAIVWYRAAAEQGVVAAQY--GLGWLYFHSSPPNYELAEQWWQEAVKQG 873
Query: 268 HGKAQ 272
AQ
Sbjct: 874 DQNAQ 878
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 14/191 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A+ G + +GRGV ++ KAL+ L A +G+ +A + G+ Y +
Sbjct: 660 DAIAQYNLGLAYAYGRGVEQSDKKALEYTLLAAEQGNAIAQYNLGVRYESGQGVVQNYTE 719
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A Y +AA G+P+ Q NLG+ Y ++A +A+ GH AQ+ L L
Sbjct: 720 AAKWYTKAAEQGNPSAQNNLGLLYADGNGVEKDTDKAADWCEKAADQGHADAQFNLGLLY 779
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ + ++AA WY +AAE G+ A N ++ Y G G+ H +A W + AA+ G
Sbjct: 780 AQSTDTEEGQRQAAAWYAKAAEQGHSGAQNNLAIAYFNGWGVEQDHEKAIVWYRAAAEQG 839
Query: 268 HGKAQLEHGLG 278
AQ +GLG
Sbjct: 840 VVAAQ--YGLG 848
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
GK ++ G GV ++ +A + F + A RG A G Y MD ++AA + +
Sbjct: 45 GKMYEQGLGVNQDYVQAANYFRQAAERGYPPAQAKLGEFYANGLGLPMDYRQAA-EWFSK 103
Query: 163 AAVLGD--PAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
AA D P + + S + E A+ + + AQ+ L G+GV +
Sbjct: 104 AADQQDKTPEHRLHEACSAYEVEDFDTALSTFQELAQENDAVAQFHLGEMYSAGKGVPTD 163
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
Q+AA WY AA+ +V A ++ GEG+ +R A +W+ +AA+
Sbjct: 164 FQQAADWYELAAKQDFVPAQVRLGRMFANGEGVQKDYRAAAEWLMKAAE 212
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
+ QA+ AQ+ L +G GV+ + +AA ++ +AAE GY A Y+ G
Sbjct: 28 IFLQAAQQKSTIAQFHLGKMYEQGLGVNQDYVQAANYFRQAAERGYPPAQAKLGEFYANG 87
Query: 247 EGLPLSHRQARKWMKRAAD 265
GLP+ +RQA +W +AAD
Sbjct: 88 LGLPMDYRQAAEWFSKAAD 106
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 26/184 (14%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQ 162
+R G+ F +G GV+K+ A + +K A R + + + + A ++ +
Sbjct: 184 VRLGRMFANGEGVQKDYRAAAEWLMKAAEREDDDNENLFEQAQNAYRQNDYANAFNMLEK 243
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGH------VR---------- 198
A A Q+ LG Y E+A++ +++ G+ VR
Sbjct: 244 LANRNHDAAQYYLGSMYKYGYSVRQDNEQAIEWYMKSAKQGYPDAVAMVRELASKHSMPL 303
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
A + L GV+ + +AA W+LRAA+ GYV A + Y+ G G+ + QA
Sbjct: 304 AMFGLGELYGSALGVEQDDVQAADWFLRAAQRGYVPAQIKMAEWYAQGRGVARDYLQASA 363
Query: 259 WMKR 262
W +
Sbjct: 364 WYGK 367
>gi|397661938|ref|YP_006502638.1| putative Sel1 repeat protein [Taylorella equigenitalis ATCC 35865]
gi|394350117|gb|AFN36031.1| putative Sel1 repeat protein [Taylorella equigenitalis ATCC 35865]
Length = 341
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 110/245 (44%), Gaps = 16/245 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA- 155
+A G + G GV +N A+ + K AA+G A+ + G MY + +DK +
Sbjct: 93 DAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYMMGYGVDKNYSK 152
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
AI LY +AA F+LG Y + E+ +L +A+ H AQY L +
Sbjct: 153 AIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTNELYEKAANKNHTEAQYNLGIHY 212
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV + ++A WY +AAE + A N + Y GEG+ + A +W K+AA
Sbjct: 213 QFGKGVTKDDKKAMEWYKKAAEADHYLAQRNLAYLYEKGEGVEHDYDLAMEWYKKAAKHN 272
Query: 268 HGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
AQ GL G T A+++ LA E A K+ I ++ + D+
Sbjct: 273 DPVAQNNLGLLYEYGKGTSKNWKNAIMWYTLACDNHEKAGCEGKDRIEAKIKKENEDKNK 332
Query: 324 LVVDS 328
+++
Sbjct: 333 TKIEN 337
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 44/160 (27%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ----------------------------------- 181
+S A GD QF LG Y +
Sbjct: 82 LSTIEDRANKGDAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYM 141
Query: 182 ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
+A++L +A+ A + L +G GV+ +L++ Y +AA +
Sbjct: 142 MGYGVDKNYSKAIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTNELYEKAANKNH 201
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A YN + Y FG+G+ ++A +W K+AA+ H AQ
Sbjct: 202 TEAQYNLGIHYQFGKGVTKDDKKAMEWYKKAAEADHYLAQ 241
>gi|440798272|gb|ELR19340.1| Sel1 repeat/Ubox domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 918
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEAAI 157
+ + R G+ ++HG+G K+ +A +L+ + G A GL Y + +
Sbjct: 738 VAMYRLGQCYEHGKGAGKDEKRAAAVYLQASKAGCAEAQNYLGLCYQFGKLVQRNPDKSF 797
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR 209
L++QA G +NLG Y EAV+L +A+ G AQ++L +C
Sbjct: 798 QLFQQATESGFVDALYNLGRCYHHGEGVAKNMAEAVELYTKAAALGQRSAQWKLGMCYEC 857
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G V+ ++Q+A Y++AA+ G+ RA + S CY G+G+P+ +A+KW +RA + G
Sbjct: 858 GEAVEKDIQKAVHLYIQAAKQGHSRAQRHLSHCYRTGKGVPVDLAKAKKWRQRAIENG 915
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 92/195 (47%), Gaps = 14/195 (7%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE- 149
W L +A +LR + ++ G GV + KA + + K A RGS +AM G Y
Sbjct: 691 WFKKAMQLNDAGGMLRLAECYEEGEGVGASETKAFELYEKAAMRGSPVAMYRLGQCYEHG 750
Query: 150 ----MDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHV 197
D+K AA ++Y QA+ G Q LG+ Y +++ +L QA+ +G V
Sbjct: 751 KGAGKDEKRAA-AVYLQASKAGCAEAQNYLGLCYQFGKLVQRNPDKSFQLFQQATESGFV 809
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
A Y L C H G GV N+ EA Y +AA G A + +CY GE + ++A
Sbjct: 810 DALYNLGRCYHHGEGVAKNMAEAVELYTKAAALGQRSAQWKLGMCYECGEAVEKDIQKAV 869
Query: 258 KWMKRAADCGHGKAQ 272
+AA GH +AQ
Sbjct: 870 HLYIQAAKQGHSRAQ 884
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 107/231 (46%), Gaps = 19/231 (8%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---- 151
+ L EAMV L G +K G+GV + KAL F K M+ Y E +
Sbjct: 662 KQLPEAMVSL--GLCYKLGKGVELDAAKALGWFKKAMQLNDAGGMLRLAECYEEGEGVGA 719
Query: 152 KKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQL 203
+ A LY +AA+ G P + LG Y ++ A + QAS AG AQ L
Sbjct: 720 SETKAFELYEKAAMRGSPVAMYRLGQCYEHGKGAGKDEKRAAAVYLQASKAGCAEAQNYL 779
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
LC G+ V N ++ + + +A E G+V A+YN CY GEG+ + +A + +A
Sbjct: 780 GLCYQFGKLVQRNPDKSFQLFQQATESGFVDALYNLGRCYHHGEGVAKNMAEAVELYTKA 839
Query: 264 ADCGHGKAQLEHGL----GLFTEGEMMKAV-VYLELATRAGETAADHVKNV 309
A G AQ + G+ G E ++ KAV +Y++ A + A H+ +
Sbjct: 840 AALGQRSAQWKLGMCYECGEAVEKDIQKAVHLYIQAAKQGHSRAQRHLSHC 890
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-EAAI 157
+ A+ L W +++G G K++ KA++ + K + +G +A + Y + K A+
Sbjct: 488 KHALNSLAWA--YQNGEGCEKDIGKAIELYTKASDKGLPVARWNLAWCYHNVVKDLPKAV 545
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLH 208
Y +AA G P + LG +L+ + AV+ +AS A H A LA C
Sbjct: 546 ETYTKAADEGHPGAMWILG-RFLETGDIMGRDLKRAVEYYTKASNASHAPATASLASCYF 604
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
G+GV+ +L +A +++AAE G +A + CY G+G+ + H
Sbjct: 605 YGKGVEKDLNKAIPLFVQAAEQGNKQAEFRLGQCYEEGDGVDVDH 649
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ +AA LG + LG Y + ++A + +AS GH++A +L C
Sbjct: 367 ALLFLEEAADLGSIDAMYKLGSFYFKGRGGQKTPQQAFRRWKEASALGHLKATAKLGFCY 426
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV + EA R Y+ AA AM + + CY G+G+ A + R+A G
Sbjct: 427 LNGVGVSKDNGEAIRLYMVAASEDCPAAMNDLAWCYQNGQGIAKDMAAAVALLTRSAKQG 486
Query: 268 H 268
+
Sbjct: 487 N 487
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 27/221 (12%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAI 157
+ + G + GRG +K +A + + +A G A G Y D EA I
Sbjct: 382 AMYKLGSFYFKGRGGQKTPQQAFRRWKEASALGHLKATAKLGFCYLNGVGVSKDNGEA-I 440
Query: 158 SLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHR 209
LY AA PA +L GI+ AV LL +++ G+ A LA
Sbjct: 441 RLYMVAASEDCPAAMNDLAWCYQNGQGIAKDMAAAVALLTRSAKQGNKHALNSLAWAYQN 500
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY-SFGEGLPLSHRQARKWMKRAADCGH 268
G G + ++ +A Y +A++ G A +N + CY + + LP +A + +AAD GH
Sbjct: 501 GEGCEKDIGKAIELYTKASDKGLPVARWNLAWCYHNVVKDLP----KAVETYTKAADEGH 556
Query: 269 GKAQLEHGLGLFTE-GEMM-----KAVVYLELATRAGETAA 303
A LG F E G++M +AV Y A+ A A
Sbjct: 557 PGAMWI--LGRFLETGDIMGRDLKRAVEYYTKASNASHAPA 595
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 107 WGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYR 161
W + KH R G ++N + AL + A GS AM G Y++ + A ++
Sbjct: 349 WKEARKHYRKGPQRNENLALLFLEEAADLGSIDAMYKLGSFYFKGRGGQKTPQQAFRRWK 408
Query: 162 QAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+A+ LG LG YL EA++L A+ A LA C G+G+
Sbjct: 409 EASALGHLKATAKLGFCYLNGVGVSKDNGEAIRLYMVAASEDCPAAMNDLAWCYQNGQGI 468
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
++ A R+A+ G A+ + + Y GEG +A + +A+D G
Sbjct: 469 AKDMAAAVALLTRSAKQGNKHALNSLAWAYQNGEGCEKDIGKAIELYTKASDKG 522
>gi|329849411|ref|ZP_08264257.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
gi|328841322|gb|EGF90892.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
Length = 555
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKE-AA 156
A+ ++ + GRG+RKN +A A G A D ++Y + K E +A
Sbjct: 236 ALAQRQFARMLGQGRGIRKNDGEAFKWMKLAADSGLMDAQFDVAMLYGNGNGVAKDEVSA 295
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLH 208
YR+AA GD QFNL + ++ EA + ++ G V AQY LAL
Sbjct: 296 AYWYRKAAEQGDREAQFNLAVRLMKGTGVLRDDAEAFTWMKLSAEQGLVNAQYHLALLYE 355
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
GRG D ++ + +W +AA G+ A Y+ + G+G P + + +W K AAD GH
Sbjct: 356 LGRGTDMDMAQRNQWMEKAANQGWAAAQYDVGVRVYKGDGFPKNEAEGMRWFKLAADQGH 415
Query: 269 GKA 271
KA
Sbjct: 416 EKA 418
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+ V ++ +AL + A +G A + G +Y E D EA + Y
Sbjct: 63 GNDYYEGKVVPQDYAQALKWYRLAADQGDARAYHNLGTIYLEGKVVTQDYAEA-LKWYHM 121
Query: 163 AAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q L G+ E + K + +A+ G +QY + L +GRGV
Sbjct: 122 AADQGLVYSQIRLSEMYSRGYGVEKNDETSAKWMRKAAEQGDAASQYNFGIILSKGRGVA 181
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 272
+ EA +W+ AAE G + A Y + + G G+ S + A W ++AA+ GH AQ
Sbjct: 182 EDDVEAVKWFSLAAEQGDIDAQYALGVAFINGAGVEKSDKAAVAWFRKAAEQGHALAQRQ 241
Query: 273 ----LEHGLGL-FTEGEMMKAVVYLELATRAG 299
L G G+ +GE K +++LA +G
Sbjct: 242 FARMLGQGRGIRKNDGEAFK---WMKLAADSG 270
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 16/231 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G + G+ V ++ +AL + A +G + + MY + ++K E + R+A
Sbjct: 99 GTIYLEGKVVTQDYAEALKWYHMAADQGLVYSQIRLSEMYSRGYGVEKNDETSAKWMRKA 158
Query: 164 AVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD A Q+N GI + EAVK A+ G + AQY L + G GV+
Sbjct: 159 AEQGDAASQYNFGIILSKGRGVAEDDVEAVKWFSLAAEQGDIDAQYALGVAFINGAGVEK 218
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE- 274
+ + A W+ +AAE G+ A + G G+ + +A KWMK AAD G AQ +
Sbjct: 219 SDKAAVAWFRKAAEQGHALAQRQFARMLGQGRGIRKNDGEAFKWMKLAADSGLMDAQFDV 278
Query: 275 ---HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
+G G + + A + A G+ A V L + + RD A
Sbjct: 279 AMLYGNGNGVAKDEVSAAYWYRKAAEQGDREAQFNLAVRLMKGTGVLRDDA 329
>gi|212704272|ref|ZP_03312400.1| hypothetical protein DESPIG_02327 [Desulfovibrio piger ATCC 29098]
gi|212672234|gb|EEB32717.1| Sel1 repeat protein [Desulfovibrio piger ATCC 29098]
Length = 352
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G GVR+N +A F K A +G +A + G +Y + AI Y +AA G
Sbjct: 137 GDGVRRNYGEAGRWFRKAAEQGLAMAQYNLGYLYAHGRGVRKSENEAIDWYGRAANQGLA 196
Query: 170 AGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q++LG YL +A +A+ H++AQ LA GRG + +A
Sbjct: 197 DAQYSLGWMYLNAKASNQDDTKAAHWFQRAAEQDHLKAQNNLAYMYAEGRGFAQDNLKAV 256
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL---- 277
WY RAAE GY A YN Y G G+P + +A +W ++AA+ AQ GL
Sbjct: 257 EWYTRAAERGYAEAQYNLGFMYEQGRGVPQDYAKAVEWYRKAAEQNEPAAQYSLGLMYDQ 316
Query: 278 GLFTEGEMMKAVVYLELATRAGETAA 303
G + + +A + LA + G+ A
Sbjct: 317 GTGVQRNLSEATRWYRLAAKNGDPDA 342
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA 155
AM G + HGRGVRK+ ++A+D + + A +G A G MY D +A
Sbjct: 160 AMAQYNLGYLYAHGRGVRKSENEAIDWYGRAANQGLADAQYSLGWMYLNAKASNQDDTKA 219
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCL 207
A +++AA Q NL Y + +AV+ +A+ G+ AQY L
Sbjct: 220 A-HWFQRAAEQDHLKAQNNLAYMYAEGRGFAQDNLKAVEWYTRAAERGYAEAQYNLGFMY 278
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+GRGV + +A WY +AAE A Y+ L Y G G+ + +A +W + AA G
Sbjct: 279 EQGRGVPQDYAKAVEWYRKAAEQNEPAAQYSLGLMYDQGTGVQRNLSEATRWYRLAAKNG 338
Query: 268 HGKAQ 272
A+
Sbjct: 339 DPDAK 343
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 49/101 (48%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ + AV L QA+ G AQ LA L G GV N EA RW+ +AAE G A
Sbjct: 103 GVKKSPQRAVTLFRQAADKGLANAQNALATALATGDGVRRNYGEAGRWFRKAAEQGLAMA 162
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
YN Y+ G G+ S +A W RAA+ G AQ G
Sbjct: 163 QYNLGYLYAHGRGVRKSENEAIDWYGRAANQGLADAQYSLG 203
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
++AV LL + +G+ A Y L GRGV + Q A + +AA+ G A +
Sbjct: 73 KKAVTLLTPLTKSGNAEALYILGRLTQDGRGVKKSPQRAVTLFRQAADKGLANAQNALAT 132
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
+ G+G+ ++ +A +W ++AA+ G AQ G L+ G
Sbjct: 133 ALATGDGVRRNYGEAGRWFRKAAEQGLAMAQYNLGY-LYAHG 173
>gi|397676942|ref|YP_006518480.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397631|gb|AFN56958.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 373
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EA 155
EA+ L G + GRGV +N ++ LD F K A + + A + G Y + + K E
Sbjct: 137 EALTAL--GVFYMTGRGVPQNYERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEK 194
Query: 156 AISLYRQAAVLGDPAGQFNLGISY------------LQEEAVKLLY---QASIAGHVRAQ 200
A+ Y++AA GD ++NLG++Y + ++ K + +A+ GHV+AQ
Sbjct: 195 AVYWYQKAADKGDAEAEYNLGLAYRNLGLAYRKGEGISQDDAKAAFWYKKAADQGHVKAQ 254
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ ++ RGV + Y +AAE G +A YN ++ Y EG P Q+ W
Sbjct: 255 LNMGFAYYQARGVAQDYARGIFLYRKAAEQGDSKAEYNLAIAYYNAEGEPRDLAQSIDWF 314
Query: 261 KRAADCGHGKAQLEHGLGLFT-EGEMM-----KAVVYLELATRAGETAA 303
+RAA HG+ ++ LG+F +GE + +A+ +LE A G A
Sbjct: 315 QRAA--SHGEVSAQYNLGIFYLKGEGVPKDRNQAIFWLEKAAARGNVEA 361
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM------------DKKEA 155
G ++HG GV K+ +KA+ + K A +G A + GL Y + D +A
Sbjct: 179 GNAYRHGYGVPKDDEKAVYWYQKAADKGDAEAEYNLGLAYRNLGLAYRKGEGISQDDAKA 238
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCL 207
A Y++AA G Q N+G +Y Q V Y +A+ G +A+Y LA+
Sbjct: 239 AF-WYKKAADQGHVKAQLNMGFAYYQARGVAQDYARGIFLYRKAAEQGDSKAEYNLAIAY 297
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ G +L ++ W+ RAA G V A YN + Y GEG+P QA W+++AA G
Sbjct: 298 YNAEGEPRDLAQSIDWFQRAASHGEVSAQYNLGIFYLKGEGVPKDRNQAIFWLEKAAARG 357
Query: 268 HGKAQ 272
+ +AQ
Sbjct: 358 NVEAQ 362
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++AA WY +AAE G A YN +L Y G+G+ S+ +A W+K+AAD KA+ GL
Sbjct: 12 KQAAFWYEKAAEQGIDEAEYNLALAYEQGKGVEQSYERAFFWLKKAADQNFFKAETHLGL 71
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAM-------VDAGLMYWEMDKKEAAI------ 157
++ G+GV ++ ++A +LK AA + AG+M DKK A+
Sbjct: 37 YEQGKGVEQSYERAF-FWLKKAADQNFFKAETHLGLAYQAGIMLPRDDKKAVALFMKADR 95
Query: 158 -SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
+ Y +A + A + G+ ++AV +A+ G A L + GRGV N
Sbjct: 96 QAYYAEAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGEALTALGVFYMTGRGVPQN 155
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ + +AA+ A N Y G G+P +A W ++AAD G A+ E+
Sbjct: 156 YERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEKAVYWYQKAAD--KGDAEAEYN 213
Query: 277 LGLFTEGEMMKAVVYLELATRAGE 300
LGL A L LA R GE
Sbjct: 214 LGL--------AYRNLGLAYRKGE 229
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+A+ G A+Y LAL +G+GV+ + + A W +AA+ + +A + L Y G L
Sbjct: 20 KAAEQGIDEAEYNLALAYEQGKGVEQSYERAFFWLKKAADQNFFKAETHLGLAYQAGIML 79
Query: 250 PLSHRQARK-WMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 303
P ++A +MK + +AQ+ G G + + KAV Y + A G+ A
Sbjct: 80 PRDDKKAVALFMKADRQAYYAEAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGEA 138
>gi|350270102|ref|YP_004881410.1| hypothetical protein OBV_17060, partial [Oscillibacter
valericigenes Sjm18-20]
gi|348594944|dbj|BAK98904.1| hypothetical protein OBV_17060 [Oscillibacter valericigenes
Sjm18-20]
Length = 969
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 14/185 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
GK ++ G GV+K+ +A + + A +G + VD G+ Y W ++K E A + A
Sbjct: 529 GKCYEFGYGVKKDYAQAAEHYHISAGQGYAPSQVDLGVFYENGWGVEKNLETAFHFHMMA 588
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A G GQ N+G Y +++ Y ++ H RAQY L LC G GV+
Sbjct: 589 AKQGFAIGQCNVGYCYEAGTGIEINYAEALRWYRLSAEQRHARAQYHLGLCYEDGIGVEP 648
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA WY AAE GYV + + Y G G+ + +A KW AA G ++
Sbjct: 649 DFSEAMAWYQLAAEQGYVYSQRSMGRFYEKGLGVGQDYEEAIKWFSLAAKQGDDESMCT- 707
Query: 276 GLGLF 280
LG+F
Sbjct: 708 -LGIF 711
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG----LMYWEMDKKEAA 156
AM R G + G + ++ ++A F KGA + A G Y + A
Sbjct: 234 AMAQSRLGLLYLRGEVLEQSDEQAFLWFSKGAEQEEPSAQCLLGECYEFGYGTEPNPQKA 293
Query: 157 ISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLH 208
+ LYRQAA G Q N+G Y +EEAVK A+ G+ RAQ L CL
Sbjct: 294 LELYRQAAEQGSVPAQCNVGYCYYVGVGAEEDEEEAVKWFSLAAERGYARAQCLLGECLL 353
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GV+ +AA ++ AA GY +A +N C+ G G+ +AR+ +++A+ G+
Sbjct: 354 NGHGVEKGPIKAAEYFGAAAGQGYPQAQFNLGWCFECGIGVEQDLEKARELYRQSAEHGY 413
Query: 269 GKAQLEHG 276
AQ G
Sbjct: 414 VPAQCNLG 421
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 52/250 (20%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEA------- 155
G+ ++ G G N KAL+ + + A +GS A + G Y+ E D++EA
Sbjct: 277 GECYEFGYGTEPNPQKALELYRQAAEQGSVPAQCNVGYCYYVGVGAEEDEEEAVKWFSLA 336
Query: 156 ----------------------------AISLYRQAAVLGDPAGQFNLG--------ISY 179
A + AA G P QFNLG +
Sbjct: 337 AERGYARAQCLLGECLLNGHGVEKGPIKAAEYFGAAAGQGYPQAQFNLGWCFECGIGVEQ 396
Query: 180 LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
E+A +L Q++ G+V AQ L + G GV+ N +EAA+W+ AAE Y RA +
Sbjct: 397 DLEKARELYRQSAEHGYVPAQCNLGNLYYSGIGVEENNEEAAKWFALAAERRYPRAQFLL 456
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELA 295
C+ G G+ + +A + + +A+ G+ AQ G+ G+ E + A+ + E A
Sbjct: 457 GECFENGFGVEKGNEKALELYRLSAEQGYATAQNRVGVFYYHGIVVEQDYPAAMKWFERA 516
Query: 296 TRAGETAADH 305
G +A H
Sbjct: 517 AEQGFISARH 526
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 106/251 (42%), Gaps = 65/251 (25%)
Query: 85 SLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKA---------LDS-------- 127
SL K +D E+M L G FKHGRGV+++ KA LD
Sbjct: 694 SLAAKQGDD------ESMCTL--GIFFKHGRGVQQDYQKAIWWYQQAVDLDCARAQTCLA 745
Query: 128 --FLKG-----------------AARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQA 163
+ KG A G A+ + ++Y D+ EA + LYR A
Sbjct: 746 IMYEKGLEVDRDYGEAARLYRLAADNGDMHAVYNLAVLYDYGRGMPQDQVEA-VRLYRIA 804
Query: 164 AVLGDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A G P+ NLG +Y +EA +L A+ G+ AQ L + G V+
Sbjct: 805 AEQGQPSALANLGYAYNHAEGGLEKDSQEAFRLYRLAAEKGNAVAQCNLGVMYKNGENVE 864
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG----- 269
+LQEA R Y AAE G + A+ N CY GEG+ + QA + ++A + GH
Sbjct: 865 RDLQEAVRLYRLAAEQGNLTALNNLGECYENGEGVEQDYAQAMQLYRQAFERGHAFAASS 924
Query: 270 -KAQLEHGLGL 279
A E GLG+
Sbjct: 925 IGALYEKGLGV 935
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
++AQ++LA+C + G GV + ++A W+ RAAE G+V A YN CY G G+ L +A
Sbjct: 54 LQAQHELAICYYTGDGVKQDYEQAVYWFSRAAEQGHVVAQYNLGSCYENGVGVDLDDEKA 113
Query: 257 RKWMKRAADCGHGKAQLEHG 276
+W + AA+ AQ +G
Sbjct: 114 VRWYQEAAEQNFAPAQCAYG 133
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
F+ G GV ++L+KA + + + A G A + G +Y+ + E A + AA
Sbjct: 388 FECGIGVEQDLEKARELYRQSAEHGYVPAQCNLGNLYYSGIGVEENNEEAAKWFALAAER 447
Query: 167 GDPAGQF--------NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
P QF G+ E+A++L ++ G+ AQ ++ + + G V+ +
Sbjct: 448 RYPRAQFLLGECFENGFGVEKGNEKALELYRLSAEQGYATAQNRVGVFYYHGIVVEQDYP 507
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
A +W+ RAAE G++ A ++ CY FG G+ + QA + +A G+ +Q++ LG
Sbjct: 508 AAMKWFERAAEQGFISARHSLGKCYEFGYGVKKDYAQAAEHYHISAGQGYAPSQVD--LG 565
Query: 279 LFTE 282
+F E
Sbjct: 566 VFYE 569
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGD 168
G GV+++ ++A+ F + A +G +A + G Y ++D E A+ Y++AA
Sbjct: 67 GDGVKQDYEQAVYWFSRAAEQGHVVAQYNLGSCYENGVGVDLDD-EKAVRWYQEAAEQNF 125
Query: 169 PAGQ--------FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
Q GI +E+A L ++ G+ AQ L + G V+ + QEA
Sbjct: 126 APAQCAYGWYMELGRGIKEDKEQAAHLYLLSAEQGYAPAQCNLGFFYYHGITVEVDNQEA 185
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
W+ +AE GY RA + CY +G G+ +A + + AA+ AQ GL L+
Sbjct: 186 VHWFSESAERGYPRARFLLGECYDYGYGVQQDRAKAVELYRLAAEDDFAMAQSRLGL-LY 244
Query: 281 TEGEMMK 287
GE+++
Sbjct: 245 LRGEVLE 251
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKE 154
R A G ++ G GV + +A+ + A +G + G Y + E
Sbjct: 628 RHARAQYHLGLCYEDGIGVEPDFSEAMAWYQLAAEQGYVYSQRSMGRFYEKGLGVGQDYE 687
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGH--------VRAQYQLALC 206
AI + AA GD LGI + V+ YQ +I + RAQ LA+
Sbjct: 688 EAIKWFSLAAKQGDDESMCTLGIFFKHGRGVQQDYQKAIWWYQQAVDLDCARAQTCLAIM 747
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
+G VD + EAAR Y AA+ G + A+YN ++ Y +G G+P +A + + AA+
Sbjct: 748 YEKGLEVDRDYGEAARLYRLAADNGDMHAVYNLAVLYDYGRGMPQDQVEAVRLYRIAAEQ 807
Query: 267 GHGKA 271
G A
Sbjct: 808 GQPSA 812
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYR 161
+G + GRG++++ ++A +L A +G A + G Y+ E+D +EA + +
Sbjct: 132 YGWYMELGRGIKEDKEQAAHLYLLSAEQGYAPAQCNLGFFYYHGITVEVDNQEA-VHWFS 190
Query: 162 QAAVLGDPAGQFNLGISY-----LQEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
++A G P +F LG Y +Q++ AV+L A+ AQ +L L RG +
Sbjct: 191 ESAERGYPRARFLLGECYDYGYGVQQDRAKAVELYRLAAEDDFAMAQSRLGLLYLRGEVL 250
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ + ++A W+ + AE A CY FG G + ++A + ++AA+ G AQ
Sbjct: 251 EQSDEQAFLWFSKGAEQEEPSAQCLLGECYEFGYGTEPNPQKALELYRQAAEQGSVPAQC 310
Query: 274 EHG----LGLFTEGEMMKAVVYLELATRAG 299
G +G+ E + +AV + LA G
Sbjct: 311 NVGYCYYVGVGAEEDEEEAVKWFSLAAERG 340
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 66/170 (38%), Gaps = 12/170 (7%)
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQE 219
D Q L I Y + VK Y+ ++ GHV AQY L C G GVD + ++
Sbjct: 53 DLQAQHELAICYYTGDGVKQDYEQAVYWFSRAAEQGHVVAQYNLGSCYENGVGVDLDDEK 112
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL-- 277
A RWY AAE + A G G+ QA +A+ G+ AQ G
Sbjct: 113 AVRWYQEAAEQNFAPAQCAYGWYMELGRGIKEDKEQAAHLYLLSAEQGYAPAQCNLGFFY 172
Query: 278 --GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
G+ E + +AV + + G A + +DRA V
Sbjct: 173 YHGITVEVDNQEAVHWFSESAERGYPRARFLLGECYDYGYGVQQDRAKAV 222
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 88/215 (40%), Gaps = 25/215 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-------KKEAAISLY 160
G +++G GV + +KA+ + + A + A G W M+ KE A LY
Sbjct: 97 GSCYENGVGVDLDDEKAVRWYQEAAEQNFAPAQCAYG---WYMELGRGIKEDKEQAAHLY 153
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+A G Q NLG Y +EAV +++ G+ RA++ L C G G
Sbjct: 154 LLSAEQGYAPAQCNLGFFYYHGITVEVDNQEAVHWFSESAERGYPRARFLLGECYDYGYG 213
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +A Y AAE + A L Y GE L S QA W + A+ AQ
Sbjct: 214 VQQDRAKAVELYRLAAEDDFAMAQSRLGLLYLRGEVLEQSDEQAFLWFSKGAEQEEPSAQ 273
Query: 273 LEHG----LGLFTEGEMMKAVVYLELATRAGETAA 303
G G TE KA LEL +A E +
Sbjct: 274 CLLGECYEFGYGTEPNPQKA---LELYRQAAEQGS 305
>gi|46309573|ref|NP_035474.1| protein sel-1 homolog 1 isoform b precursor [Mus musculus]
gi|4159995|gb|AAD05210.1| SELlL [Mus musculus]
gi|20073079|gb|AAH26816.1| Sel-1 suppressor of lin-12-like (C. elegans) [Mus musculus]
gi|74144524|dbj|BAE36100.1| unnamed protein product [Mus musculus]
Length = 740
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 333 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 392
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 393 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 452
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 453 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 512
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+ + AVV YL LA + E A + IL Q AT
Sbjct: 513 KDEDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 549
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 208 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 267
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 268 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 327
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 328 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 387
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 388 ADMGNPVGQ--SGLGM 401
>gi|319779711|ref|YP_004130624.1| hypothetical protein TEQUI_1569 [Taylorella equigenitalis MCE9]
gi|317109735|gb|ADU92481.1| hypothetical protein TEQUI_1569 [Taylorella equigenitalis MCE9]
Length = 341
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 110/245 (44%), Gaps = 16/245 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA- 155
+A G + G GV +N A+ + K AA+G A+ + G MY + +DK +
Sbjct: 93 DAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYMMGYGVDKNYSK 152
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
AI LY +AA F+LG Y + E+ +L +A+ H AQY L +
Sbjct: 153 AIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTNELYEKAANKNHTEAQYNLGIHY 212
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV + ++A WY +AAE + A N + Y GEG+ + A +W K+AA
Sbjct: 213 KFGKGVTKDDKKAMEWYKKAAEADHYLAQRNLAYLYEKGEGVEHDYDLAMEWYKKAAKHN 272
Query: 268 HGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
AQ GL G T A+++ LA E A K+ I ++ + D+
Sbjct: 273 DPVAQNNLGLLYEYGKGTSKNWKNAIMWYTLACDNHEKAGCEGKDRIEAKIKKENEDKNK 332
Query: 324 LVVDS 328
+++
Sbjct: 333 TKIEN 337
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 44/160 (27%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ----------------------------------- 181
+S A GD QF LG Y +
Sbjct: 82 LSTIEDRANKGDAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYM 141
Query: 182 ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
+A++L +A+ A + L +G GV+ +L++ Y +AA +
Sbjct: 142 MGYGVDKNYSKAIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTNELYEKAANKNH 201
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A YN + Y FG+G+ ++A +W K+AA+ H AQ
Sbjct: 202 TEAQYNLGIHYKFGKGVTKDDKKAMEWYKKAAEADHYLAQ 241
>gi|420157155|ref|ZP_14663995.1| Sel1 repeat protein [Clostridium sp. MSTE9]
gi|394757165|gb|EJF40224.1| Sel1 repeat protein [Clostridium sp. MSTE9]
Length = 1125
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ ++ G G KNL+KA+ + A + +A+ G Y + D K+A LY +
Sbjct: 891 GQCYERGHGTEKNLEKAIHWYQLAAEQEDGIALNTLGNRYKDGNGVKQDYKKA-FELYER 949
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A G+ AG NLG +Y E+AV L QA G A LA C G+GV
Sbjct: 950 AVAAGNSAGLVNLGRAYRYGEGVEKDLEKAVSLFRQAVEKGRDVAYGNLADCYETGQGVK 1009
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA R YL AE G AM++ Y G G+P QA +W ++AA+ G AQ
Sbjct: 1010 QDFAEAMRLYLLGAEHGDESAMFSIGNLYENGMGVPKDFAQAAEWYRKAAE--EGDAQSC 1067
Query: 275 HGLGLFTE---GEMMKAVVYLELATRAGETAADHVKNVI 310
+ LG+F E G +EL +A E ++ K V+
Sbjct: 1068 YRLGVFYEKGAGVKQDTDKAIELYRQAAELGYENAKTVL 1106
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ G GV ++ +KA++ + A +G+ A + G Y+ + E A+ Y +AA
Sbjct: 714 YECGEGVEEDKEKAMELYRLSAEQGNARAQCNLGFFYYHGIAVEEDNEQAVYWYSKAAEQ 773
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q LG+ Y E AV+L A H AQ L C G GV+ +
Sbjct: 774 GYTRAQHLLGVCYEHGWGVERNPERAVELYQIAVKKNHQVAQCDLGWCYEFGVGVEKDET 833
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----- 273
+A Y +AE GY RA N CY FG G+ QA W ++A+ H +AQ
Sbjct: 834 KAVELYRLSAEQGYPRAQSNLGDCYYFGTGIEEDKDQAFYWFSKSAEQEHPRAQFWMGQC 893
Query: 274 -EHGLGLFTEGEMMKAVVYLELATR 297
E G G TE + KA+ + +LA
Sbjct: 894 YERGHG--TEKNLEKAIHWYQLAAE 916
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 48/213 (22%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEA------- 155
G +++G GV ++ +KA++ + A +G A + G Y+ E D +EA
Sbjct: 459 GVLYEYGMGVEQDKEKAVELYRASAEQGYAPAQCNLGYCYYSAIGVEEDNEEAVRWFSKA 518
Query: 156 ----------------------------AISLYRQAAVLGDPAGQFNLGISYL------- 180
A+ LYR AA G Q NLG Y
Sbjct: 519 AEQNFPRAQCLLGECYENGYGVETDKAKAMELYRLAAEQGHTPAQCNLGFFYYIGIGIEE 578
Query: 181 -QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
EEAV+ +A+ + RAQ L C G GV+ +L A +Y +AAE GY A N
Sbjct: 579 NNEEAVRWFTKAADKNYPRAQNLLGECYENGYGVERDLTRAREFYHKAAEQGYAPAQCNL 638
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
Y +G + + H +A +W +AAD GH +AQ
Sbjct: 639 GNFYYYGVMVDVDHEEAVRWFTKAADQGHPRAQ 671
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 108/272 (39%), Gaps = 54/272 (19%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEA 155
A LL G+ +++G GV + KA++ + A +G T A + G Y+ E + +EA
Sbjct: 526 AQCLL--GECYENGYGVETDKAKAMELYRLAAEQGHTPAQCNLGFFYYIGIGIEENNEEA 583
Query: 156 -----------------------------------AISLYRQAAVLGDPAGQFNLGISYL 180
A Y +AA G Q NLG Y
Sbjct: 584 VRWFTKAADKNYPRAQNLLGECYENGYGVERDLTRAREFYHKAAEQGYAPAQCNLGNFYY 643
Query: 181 --------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
EEAV+ +A+ GH RAQ L +C +G GV+ N A Y AA
Sbjct: 644 YGVMVDVDHEEAVRWFTKAADQGHPRAQRMLGMCYAQGYGVEENQARAVELYRLAAAKKD 703
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKA 288
A + LCY GEG+ +A + + +A+ G+ +AQ G G+ E + +A
Sbjct: 704 SDAQCDLGLCYECGEGVEEDKEKAMELYRLSAEQGNARAQCNLGFFYYHGIAVEEDNEQA 763
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRD 320
V + A G T A H+ V + R+
Sbjct: 764 VYWYSKAAEQGYTRAQHLLGVCYEHGWGVERN 795
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQA 163
G + G GV +N ++A++ F K A +G A G+ Y + +++ A A LY+ A
Sbjct: 387 GYFYYTGVGVEENNEEAVNWFSKAAEQGYPRARHLLGICYENGYGVERDPARAAELYQAA 446
Query: 164 AVLGDPAG--------QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P ++ +G+ +E+AV+L ++ G+ AQ L C + GV+
Sbjct: 447 AEQEYPDARCALGVLYEYGMGVEQDKEKAVELYRASAEQGYAPAQCNLGYCYYSAIGVEE 506
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +EA RW+ +AAE + RA CY G G+ +A + + AA+ GH AQ
Sbjct: 507 DNEEAVRWFSKAAEQNFPRAQCLLGECYENGYGVETDKAKAMELYRLAAEQGHTPAQC-- 564
Query: 276 GLGLF 280
LG F
Sbjct: 565 NLGFF 569
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDK-KEAAISLYR 161
R G + + GV ++ ++A+ F K A + A G Y W ++ +E A LY
Sbjct: 241 RLGLIYLYALGVERDAEQAITWFNKAAEQEYPQAWCVLGECYENGWGTEQDQEKARELYL 300
Query: 162 QAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+A G Q NLG Y EEA + +A+ H RAQ L LC G GV
Sbjct: 301 LSAEQGYAPAQCNLGYLYYTGTGVKEDNEEAARWFSKAAEKKHPRAQCLLGLCYENGYGV 360
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ + +AA Y + E GY A N Y G G+ ++ +A W +AA+ G+ +A+
Sbjct: 361 EEDKAKAAELYRLSGEQGYAPAQCNLGYFYYTGVGVEENNEEAVNWFSKAAEQGYPRAR- 419
Query: 274 EHGLGLFTE 282
H LG+ E
Sbjct: 420 -HLLGICYE 427
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 22/201 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ +++G G ++ +KA + +L A +G A + G +Y+ + D +EAA + +
Sbjct: 279 GECYENGWGTEQDQEKARELYLLSAEQGYAPAQCNLGYLYYTGTGVKEDNEEAA-RWFSK 337
Query: 163 AAVLGDPAGQFNLGISY-----LQEEAVKL--LYQAS-IAGHVRAQYQLALCLHRGRGVD 214
AA P Q LG+ Y ++E+ K LY+ S G+ AQ L + G GV+
Sbjct: 338 AAEKKHPRAQCLLGLCYENGYGVEEDKAKAAELYRLSGEQGYAPAQCNLGYFYYTGVGVE 397
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL- 273
N +EA W+ +AAE GY RA + +CY G G+ +A + + AA+ + A+
Sbjct: 398 ENNEEAVNWFSKAAEQGYPRARHLLGICYENGYGVERDPARAAELYQAAAEQEYPDARCA 457
Query: 274 -----EHGLGLFTEGEMMKAV 289
E+G+G+ E + KAV
Sbjct: 458 LGVLYEYGMGV--EQDKEKAV 476
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 19/189 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQAAVL 166
+ HG V ++ ++A+ + K A +G T A G+ Y W +++ E A+ LY+ A
Sbjct: 750 YYHGIAVEEDNEQAVYWYSKAAEQGYTRAQHLLGVCYEHGWGVERNPERAVELYQIAVKK 809
Query: 167 GDPAGQ--------FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
Q F +G+ + +AV+L ++ G+ RAQ L C + G G++ +
Sbjct: 810 NHQVAQCDLGWCYEFGVGVEKDETKAVELYRLSAEQGYPRAQSNLGDCYYFGTGIEEDKD 869
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A W+ ++AE + RA + CY G G + +A W + A A+ E G+
Sbjct: 870 QAFYWFSKSAEQEHPRAQFWMGQCYERGHGTEKNLEKAIHWYQLA-------AEQEDGIA 922
Query: 279 LFTEGEMMK 287
L T G K
Sbjct: 923 LNTLGNRYK 931
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
E A ++QAA GD + Q+NLG Y E+AV L +A+ AQ L L
Sbjct: 77 EKAFYWFQQAAEQGDVSAQYNLGACYENGIGVEQDYEKAVSLYREAADQDFPSAQCALGL 136
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
C G+GV+ + +A YL +AE Y A N Y G + QA W ++A+
Sbjct: 137 CYEIGQGVEMDKDKAMELYLLSAEQDYAPAQCNLGFFYYHGIAVEEDDAQAVAWFTKSAE 196
Query: 266 CGHGKAQ------LEHGLGL 279
+ +AQ E+G G+
Sbjct: 197 QEYPRAQFLLGECFEYGYGV 216
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVL 166
++ G+GV + DKA++ +L A + A + G Y+ +++ +A A++ + ++A
Sbjct: 138 YEIGQGVEMDKDKAMELYLLSAEQDYAPAQCNLGFFYYHGIAVEEDDAQAVAWFTKSAEQ 197
Query: 167 GDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
P QF LG + + AV+L Q++ AQ +L L GV+ + +
Sbjct: 198 EYPRAQFLLGECFEYGYGVEKDTDRAVELYRQSAELDFAPAQTRLGLIYLYALGVERDAE 257
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A W+ +AAE Y +A CY G G +AR+ +A+ G+ AQ G
Sbjct: 258 QAITWFNKAAEQEYPQAWCVLGECYENGWGTEQDQEKARELYLLSAEQGYAPAQCNLGYL 317
Query: 279 LFT 281
+T
Sbjct: 318 YYT 320
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNLQEAARWYLRAAEGGYVRAMYNT 239
Q+E ++ L + + + A++QLALC +RG G + ++A W+ +AAE G V A YN
Sbjct: 39 QQEDLQELIERAEDDDLEAKHQLALCYYRGTGGAKQDYEKAFYWFQQAAEQGDVSAQYNL 98
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
CY G G+ + +A + AAD AQ GL
Sbjct: 99 GACYENGIGVEQDYEKAVSLYREAADQDFPSAQCALGL 136
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E+A QA+ G V AQY L C G GV+ + ++A Y AA+ + A L
Sbjct: 77 EKAFYWFQQAAEQGDVSAQYNLGACYENGIGVEQDYEKAVSLYREAADQDFPSAQCALGL 136
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 292
CY G+G+ + +A + +A+ + AQ G G+ E + +AV +
Sbjct: 137 CYEIGQGVEMDKDKAMELYLLSAEQDYAPAQCNLGFFYYHGIAVEEDDAQAVAWF 191
>gi|284113133|ref|ZP_06386590.1| Sel1 domain protein repeat-containing protein [Candidatus
Poribacteria sp. WGA-A3]
gi|283829686|gb|EFC34013.1| Sel1 domain protein repeat-containing protein [Candidatus
Poribacteria sp. WGA-A3]
Length = 323
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ + GRGVR++ +A+ F + A +G LA + G MY D EAA R
Sbjct: 101 GRMYADGRGVRQDNTEAVRWFRQAAEQGHDLAQAELGFMYLLEIAVPRDDIEAA-RWVRW 159
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A G+ Q+ LG+ Y + EAV+ +A+ G+ RAQ+ L +G+GV
Sbjct: 160 VAERGNDFAQYRLGVIYDEGKGVAQDYAEAVRWFSRAAEQGNARAQHALGKMHGQGKGVH 219
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ EA RW+ +AAE G A + L Y+ G G+P + QA KW+ AA
Sbjct: 220 QDYAEAVRWHRQAAEQGLTVAQFMLGLMYADGRGMPQDYVQAHKWINLAA 269
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQ 172
R + A +SFL AA+G A G MY + D EA + +RQAA G Q
Sbjct: 75 RSDFAVAFESFLDLAAQGHADAQALVGRMYADGRGVRQDNTEA-VRWFRQAAEQGHDLAQ 133
Query: 173 FNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
LG YL E EA + + + G+ AQY+L + G+GV + EA RW+
Sbjct: 134 AELGFMYLLEIAVPRDDIEAARWVRWVAERGNDFAQYRLGVIYDEGKGVAQDYAEAVRWF 193
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
RAAE G RA + + G+G+ + +A +W ++AA+ G AQ GL ++ +G
Sbjct: 194 SRAAEQGNARAQHALGKMHGQGKGVHQDYAEAVRWHRQAAEQGLTVAQFMLGL-MYADGR 252
Query: 285 MM 286
M
Sbjct: 253 GM 254
>gi|395764181|ref|ZP_10444850.1| Sel1 domain-containing protein [Janthinobacterium lividum PAMC
25724]
Length = 519
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 94/215 (43%), Gaps = 45/215 (20%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G R+ +G+GVR++ +A K A +G A + L Y D AIS YR+A
Sbjct: 175 GLRYDNGQGVRQDRQQATAWLRKAAEQGYAPAQFNLALRYENGDVLAQDSGQAISWYRRA 234
Query: 164 AVLGDPAGQFNLGISYLQEEAV-------------------------------------- 185
A G + QFNLG+ Y + V
Sbjct: 235 AEQGHASSQFNLGLIYDNGQGVPCDKQAALDWYSKAAGQGHAAAQHNLGLHHEHGAQDYT 294
Query: 186 --KLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
++ Y QA+ G AQYQL L G+G + QEA WY +AA+ G+VRA ++ L
Sbjct: 295 QAQVFYRQAAAQGFPAAQYQLGLLHEHGQGTPVDAQEAIFWYRKAADQGHVRAQFDLGLR 354
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y G+G+P A +W +RAA+ + AQ G+
Sbjct: 355 YEHGQGVPQDLALALEWYRRAAEQDYAPAQYMQGV 389
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 13/183 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDP 169
G+GV ++ +A + K A +G A + G +Y + +++A+++ + +AA GD
Sbjct: 73 GQGVAQDFVQAAHWYQKAAEQGYAAAQYNLGWLYAKGQGMAQDSALAMLWFSRAAEQGDA 132
Query: 170 AGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q NLG+ Y +A+ +A+ G+ RAQ+ L L G+GV + Q+A
Sbjct: 133 GAQNNLGMMYDNGKGVPQDFVQAINWYRKAAEQGYARAQFNLGLRYDNGQGVRQDRQQAT 192
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
W +AAE GY A +N +L Y G+ L QA W +RAA+ GH +Q GL ++
Sbjct: 193 AWLRKAAEQGYAPAQFNLALRYENGDVLAQDSGQAISWYRRAAEQGHASSQFNLGL-IYD 251
Query: 282 EGE 284
G+
Sbjct: 252 NGQ 254
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 14/180 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+G+ ++ +AL + AA+G A + G+M + D +AA Y++
Sbjct: 31 GFMYFNGQGIEQSYAQALHWYRLAAAQGLEHAQYNLGVMCQKGQGVAQDFVQAA-HWYQK 89
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
AA G A Q+NLG Y Q+ A+ +L+ +A+ G AQ L + G+GV
Sbjct: 90 AAEQGYAAAQYNLGWLYAKGQGMAQDSALAMLWFSRAAEQGDAGAQNNLGMMYDNGKGVP 149
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY +AAE GY RA +N L Y G+G+ +QA W+++AA+ G+ AQ
Sbjct: 150 QDFVQAINWYRKAAEQGYARAQFNLGLRYDNGQGVRQDRQQATAWLRKAAEQGYAPAQFN 209
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + G+G+ ++ A+ F + A +G A + G+MY D + AI+ Y
Sbjct: 103 GWLYAKGQGMAQDSALAMLWFSRAAEQGDAGAQNNLGMMY---DNGKGVPQDFVQAINWY 159
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA G QFNLG+ Y ++A L +A+ G+ AQ+ LAL G
Sbjct: 160 RKAAEQGYARAQFNLGLRYDNGQGVRQDRQQATAWLRKAAEQGYAPAQFNLALRYENGDV 219
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ + +A WY RAAE G+ + +N L Y G+G+P + A W +
Sbjct: 220 LAQDSGQAISWYRRAAEQGHASSQFNLGLIYDNGQGVPCDKQAALDWYSK 269
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE--MDKKEAAISLYRQAAVLGD 168
+ +G+GV + ALD + K A +G A + GL + D +A + YRQAA G
Sbjct: 250 YDNGQGVPCDKQAALDWYSKAAGQGHAAAQHNLGLHHEHGAQDYTQAQV-FYRQAAAQGF 308
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
PA Q+ LG+ + +EA+ +A+ GHVRAQ+ L L G+GV +L A
Sbjct: 309 PAAQYQLGLLHEHGQGTPVDAQEAIFWYRKAADQGHVRAQFDLGLRYEHGQGVPQDLALA 368
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
WY RAAE Y A Y + + +G + A RAA GH AQ GL
Sbjct: 369 LEWYRRAAEQDYAPAQYMQGVLHDRDDGPAPDSQLACACYCRAAAQGHSLAQFALGL 425
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q +LG Y + ++ Y A+ G AQY L + +G+GV +
Sbjct: 22 GNANAQHSLGFMYFNGQGIEQSYAQALHWYRLAAAQGLEHAQYNLGVMCQKGQGVAQDFV 81
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+AA WY +AAE GY A YN Y+ G+G+ A W RAA+ G AQ G+
Sbjct: 82 QAAHWYQKAAEQGYAAAQYNLGWLYAKGQGMAQDSALAMLWFSRAAEQGDAGAQNNLGM- 140
Query: 279 LFTEGE 284
++ G+
Sbjct: 141 MYDNGK 146
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLG 167
+HG+G + +A+ + K A +G A D GL Y ++ A++L YR+AA
Sbjct: 320 EHGQGTPVDAQEAIFWYRKAADQGHVRAQFDLGLRYEHGQGVPQDLALALEWYRRAAEQD 379
Query: 168 DPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
Q+ G+ + +++ Q A+ GH AQ+ L L G+ V +
Sbjct: 380 YAPAQYMQGVLHDRDDGPAPDSQLACACYCRAAAQGHSLAQFALGLRHDNGQDVPQDYAA 439
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
A WY AA G+ RA N L + G+G PL +QA W+
Sbjct: 440 AWDWYALAARQGHARAQMNLGLMAASGQGGPLDLQQAYIWL 480
>gi|387125689|ref|YP_006291571.1| hypothetical protein ABTJ_03728 [Acinetobacter baumannii MDR-TJ]
gi|385880181|gb|AFI97276.1| TPR repeat-containing protein [Acinetobacter baumannii MDR-TJ]
Length = 230
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 14/171 (8%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDP 169
+GV KN ++A GS A G+MY+ E D K A + +AA G
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRA-FEYFAKAADKGHA 112
Query: 170 AGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NLG+ Y++ E+A + +A+ G+ A+Y LA +G GV + ++A
Sbjct: 113 KAQYNLGVLYVRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQAL 172
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+WY +AAE A YN + Y GEG+P + + A+KW ++AAD G A+
Sbjct: 173 KWYTKAAEHNESDAQYNLAQMYLNGEGMPKNLQLAKKWFQQAADAGDSDAK 223
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 167 GDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G P Q++LGI L E+A K L A G V A+Y L + G GV+ ++
Sbjct: 37 GQPIAQYHLGIMLLTGEQGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDM 96
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ A ++ +AA+ G+ +A YN + Y GEG ++ QA +W RAA+ G+ A+
Sbjct: 97 KRAFEYFAKAADKGHAKAQYNLGVLYVRGEGTAQNYEQAFEWYSRAAEQGYPPAE 151
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGG 231
F+L S E +V + + G AQY L + L G +GV N ++A +W A + G
Sbjct: 15 FSLHSSAFAEPSVADVQYRAQQGQPIAQYHLGIMLLTGEQGVVKNYEQAFKWLTAADQNG 74
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
V A Y+ + Y G G+ ++A ++ +AAD GH KAQ G+ L+ GE
Sbjct: 75 SVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGV-LYVRGE 126
>gi|290983676|ref|XP_002674554.1| predicted protein [Naegleria gruberi]
gi|284088145|gb|EFC41810.1| predicted protein [Naegleria gruberi]
Length = 889
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + HG V KN ++ + A +G A +Y+ ++ + Y +AA G
Sbjct: 673 GLMYYHGEYVSKNKEREFYWIYRAAEQGHVKAESSIACLYYAQEEYSKSFEWYLKAAEKG 732
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
D QF +G Y + A +A+ GH +AQ + + G+G+ N +
Sbjct: 733 DSDSQFEIGSLYHKGLGIPKDFTNAFSWYSKAAEHGHSKAQNNIGVLYQTGQGIPQNYSK 792
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------ 273
A W++++AE AM L Y G+G+P + A +W +AA+CG+ ++Q+
Sbjct: 793 ALEWFMKSAENNDTDAMNFIGLIYQEGQGVPQDNITAFEWFLKAAECGNVQSQILVATMY 852
Query: 274 EHGLGL 279
HG+G+
Sbjct: 853 HHGIGV 858
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 24/123 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+G+ +N KAL+ F+K A T AM GL+Y E G
Sbjct: 777 GVLYQTGQGIPQNYSKALEWFMKSAENNDTDAMNFIGLIYQE-----------------G 819
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
Q N+ A + +A+ G+V++Q +A H G GV+ NL +A +WY +A
Sbjct: 820 QGVPQDNIT-------AFEWFLKAAECGNVQSQILVATMYHHGIGVEQNLYDALKWYEKA 872
Query: 228 AEG 230
A G
Sbjct: 873 AGG 875
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%)
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A+K A+ + A++ L + H+G+ V+ + +A W+ ++AE GY A ++ L Y
Sbjct: 617 ALKYFQLAAEKDNASAEHFLGIMYHKGQVVEQDFCKAFEWFGKSAEKGYPEAQFSIGLMY 676
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
GE + + + W+ RAA+ GH KA+
Sbjct: 677 YHGEYVSKNKEREFYWIYRAAEQGHVKAE 705
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVLGDPAGQFNLGIS 178
K+ + +LK A +G + + + G +Y + + K A S Y +AA G Q N+G+
Sbjct: 720 KSFEWYLKAAEKGDSDSQFEIGSLYHKGLGIPKDFTNAFSWYSKAAEHGHSKAQNNIGVL 779
Query: 179 YLQEEAVKLLYQASIAGHVR--------AQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y + + Y ++ ++ A + L G+GV + A W+L+AAE
Sbjct: 780 YQTGQGIPQNYSKALEWFMKSAENNDTDAMNFIGLIYQEGQGVPQDNITAFEWFLKAAEC 839
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
G V++ + Y G G+ + A KW ++AA
Sbjct: 840 GNVQSQILVATMYHHGIGVEQNLYDALKWYEKAA 873
>gi|167043547|gb|ABZ08243.1| putative MORN repeat protein [uncultured marine microorganism
HF4000_APKG2J17]
Length = 577
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 18/223 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A G +++G+GV ++ A+ + A +G A + GLMY + + +
Sbjct: 252 DASAQFNLGVMYENGQGVPQDDKTAVKWYTLAAKQGHAHAQTNLGLMYRKGQGVLQDYKT 311
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCL 207
A+ +R AA GD Q NLG+ Y + E AVK A+ G AQ L
Sbjct: 312 AVKWFRLAAEQGDARAQNNLGVMYKKGEGVPQNDKTAVKWYTLAAEQGLADAQSNLGQMY 371
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G+GV + + A +W+ AAE GY RA N Y G+G+P ++ A KW K AA+ G
Sbjct: 372 RKGQGVLQDYKTAVKWFRLAAEQGYARAQNNLGFMYRNGQGVPRDYKTAVKWFKLAAEQG 431
Query: 268 HGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADH 305
AQ G ++ GE + AV + LA G A +
Sbjct: 432 LADAQYNLGQ-MYRRGEGVPRDDKTAVKWYRLAAEQGGADAQY 473
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 18/233 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +K G GV +N A+ + A +G A + G MY + + + A+ +R A
Sbjct: 332 GVMYKKGEGVPQNDKTAVKWYTLAAEQGLADAQSNLGQMYRKGQGVLQDYKTAVKWFRLA 391
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G Q NLG Y + V Y+ ++ G AQY L RG GV
Sbjct: 392 AEQGYARAQNNLGFMYRNGQGVPRDYKTAVKWFKLAAEQGLADAQYNLGQMYRRGEGVPR 451
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ + A +WY AAE G A YN Y +G G+P + + A KW + AA+ G + Q
Sbjct: 452 DDKTAVKWYRLAAEQGGADAQYNLGAMYEYGFGVPQNDKTAVKWYRLAAEQGDARTQSNL 511
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
GL ++ EG + ++A ++ +A G+ A ++ + + ++ +A
Sbjct: 512 GL-MYHEGKGVVQDYVRAHMWWSIAASQGDKDATKNRDTVAKDMTPADLSKAQ 563
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLAL 205
+AA+ +R A GD + QFNLG+ Y + AVK A+ GH AQ L L
Sbjct: 238 DAALEEFRLLAKQGDASAQFNLGVMYENGQGVPQDDKTAVKWYTLAAKQGHAHAQTNLGL 297
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+G+GV + + A +W+ AAE G RA N + Y GEG+P + + A KW AA+
Sbjct: 298 MYRKGQGVLQDYKTAVKWFRLAAEQGDARAQNNLGVMYKKGEGVPQNDKTAVKWYTLAAE 357
Query: 266 CGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G AQ G ++ +G+ + AV + LA G A + + + RD
Sbjct: 358 QGLADAQSNLGQ-MYRKGQGVLQDYKTAVKWFRLAAEQGYARAQNNLGFMYRNGQGVPRD 416
Query: 321 RAMLV 325
V
Sbjct: 417 YKTAV 421
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
+G+D L+E + A+ G A +N + Y G+G+P + A KW AA GH
Sbjct: 235 KGLDAALEE----FRLLAKQGDASAQFNLGVMYENGQGVPQDDKTAVKWYTLAAKQGHAH 290
Query: 271 AQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
AQ GL ++ +G+ + AV + LA G+ A + V+ ++ ++ V
Sbjct: 291 AQTNLGL-MYRKGQGVLQDYKTAVKWFRLAAEQGDARAQNNLGVMYKKGEGVPQNDKTAV 349
>gi|240949135|ref|ZP_04753482.1| Sel1 domain protein, repeat-containing protein [Actinobacillus
minor NM305]
gi|240296438|gb|EER47074.1| Sel1 domain protein, repeat-containing protein [Actinobacillus
minor NM305]
Length = 177
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 5/132 (3%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+EA +++ + G+ AQY L L +GRGV + ++AA+WY +AAE GY A +N
Sbjct: 44 QEAARIVKDYAERGYATAQYDLGLMYEKGRGVAQDYRQAAKWYQKAAEQGYSEAQFNLGG 103
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 297
Y+ G+G+ +RQA KW ++AA+ G+ KAQ G+ GL + + A ++E A
Sbjct: 104 MYARGQGVAQDYRQATKWWQKAAEQGYSKAQFNLGVMYDNGLGVKKNIKTAKKWVEKACN 163
Query: 298 AG-ETAADHVKN 308
G + A D++++
Sbjct: 164 GGVQKACDNLRS 175
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASI 193
DA +Y + + +EAA + + A G Q++LG+ Y + +A K +A+
Sbjct: 33 DAVKLYEQGNYQEAA-RIVKDYAERGYATAQYDLGLMYEKGRGVAQDYRQAAKWYQKAAE 91
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
G+ AQ+ L RG+GV + ++A +W+ +AAE GY +A +N + Y G G+ +
Sbjct: 92 QGYSEAQFNLGGMYARGQGVAQDYRQATKWWQKAAEQGYSKAQFNLGVMYDNGLGVKKNI 151
Query: 254 RQARKWMKRAADCGHGKA 271
+ A+KW+++A + G KA
Sbjct: 152 KTAKKWVEKACNGGVQKA 169
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N QEAAR AE GY A Y+ L Y G G+ +RQA KW ++AA+ G+ +AQ
Sbjct: 42 NYQEAARIVKDYAERGYATAQYDLGLMYEKGRGVAQDYRQAAKWYQKAAEQGYSEAQFNL 101
Query: 276 GLGLFTEGE 284
G G++ G+
Sbjct: 102 G-GMYARGQ 109
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Query: 132 AARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK 186
A RG A D GLMY + D ++AA Y++AA G QFNLG Y + + V
Sbjct: 54 AERGYATAQYDLGLMYEKGRGVAQDYRQAA-KWYQKAAEQGYSEAQFNLGGMYARGQGVA 112
Query: 187 LLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
Y +A+ G+ +AQ+ L + G GV N++ A +W +A GG +A N
Sbjct: 113 QDYRQATKWWQKAAEQGYSKAQFNLGVMYDNGLGVKKNIKTAKKWVEKACNGGVQKACDN 172
>gi|392390039|ref|YP_006426642.1| Sel1 repeat protein [Ornithobacterium rhinotracheale DSM 15997]
gi|390521117|gb|AFL96848.1| Sel1 repeat protein [Ornithobacterium rhinotracheale DSM 15997]
Length = 257
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 16/144 (11%)
Query: 149 EMDKKEAAISLYRQAAV--------LGDPAGQFNLGISYLQEEAVKLLYQ--------AS 192
EM+ E RQ A GD + QFNLG+ Y++ + + YQ A+
Sbjct: 71 EMNDNEEGTEQDRQKAFEWVQKIAEQGDASAQFNLGVMYIKGDGTQQDYQKAKEWLQKAA 130
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
G AQY L L ++G G + ++A WY +AAE G+ +A +N Y GEG+
Sbjct: 131 EQGDADAQYNLGLMYNKGTGTQQDYEKAIEWYQKAAEQGHAKAQFNLGYMYDNGEGVKQD 190
Query: 253 HRQARKWMKRAADCGHGKAQLEHG 276
+ +A +W ++AA+ G KAQ G
Sbjct: 191 YHKAFEWYQKAAEQGFAKAQYNLG 214
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPA 170
G ++ KA + K A +G A + G+MY + D + A ++AA GD
Sbjct: 77 EGTEQDRQKAFEWVQKIAEQGDASAQFNLGVMYIKGDGTQQDYQKAKEWLQKAAEQGDAD 136
Query: 171 GQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q+NLG+ Y + E+A++ +A+ GH +AQ+ L G GV + +A
Sbjct: 137 AQYNLGLMYNKGTGTQQDYEKAIEWYQKAAEQGHAKAQFNLGYMYDNGEGVKQDYHKAFE 196
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
WY +AAE G+ +A YN Y G+G+ +++A+++ +A D G
Sbjct: 197 WYQKAAEQGFAKAQYNLGSMYYNGKGVRQDYQKAKEYFGKACDNG 241
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQ+ L+ G + + Q+A W + AE G A +N + Y G+G ++
Sbjct: 61 GDADAQHNLSEMNDNEEGTEQDRQKAFEWVQKIAEQGDASAQFNLGVMYIKGDGTQQDYQ 120
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
+A++W+++AA+ G AQ GL G T+ + KA+ + + A G A
Sbjct: 121 KAKEWLQKAAEQGDADAQYNLGLMYNKGTGTQQDYEKAIEWYQKAAEQGHAKA 173
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
K W +A G + G G +++ +KA++ + K A +G A + G MY
Sbjct: 123 KEWLQKAAEQGDADAQYNLGLMYNKGTGTQQDYEKAIEWYQKAAEQGHAKAQFNLGYMY- 181
Query: 149 EMDKKEA-------AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ 190
D E A Y++AA G Q+NLG Y + V+ YQ
Sbjct: 182 --DNGEGVKQDYHKAFEWYQKAAEQGFAKAQYNLGSMYYNGKGVRQDYQ 228
>gi|168334224|ref|ZP_02692425.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 648
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYR 161
R + +G G KNL + + K A + A G Y + +D E A Y+
Sbjct: 416 RIASAYIYGNGTEKNLIQGFRWYQKAAEQEHVEAQYKLGYCYEKGTGVDSDLEMAFKFYQ 475
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA LG Q NL + Y + ++A + +A+++G +AQ L G+G
Sbjct: 476 KAATLGSVKAQTNLALCYEKGIGTTLDLDKAFEWYVRAAVSGFAKAQNNLGYLYENGKGA 535
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
N +A WY +AA G+ +A YN +LCY +G+G+ + + KW K +A+ G+ AQ
Sbjct: 536 TKNYSKAFEWYQKAAIQGHAKAQYNLALCYEYGKGVIKNLDETFKWFKESAEQGNMYAQY 595
Query: 274 EHG 276
G
Sbjct: 596 ALG 598
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 18/186 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM--VDAGLMYWEMDKKEAAISLYRQAAV 165
G + +G GV KN+ + F A +G A V +Y + +IS +
Sbjct: 316 GFGYTNGIGVTKNVARGFKWFKMAADQGHKNAQYEVSYAYIYEQASIVNTSISHDTLPLL 375
Query: 166 LGDPAGQFNLGISYLQE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
LG+ + + + L+ E KL+ + G AQY++A G G + NL
Sbjct: 376 LGNKSAEVKVITENLELIDNAELFENYKLMAER---GDATAQYRIASAYIYGNGTEKNLI 432
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------ 272
+ RWY +AAE +V A Y CY G G+ A K+ ++AA G KAQ
Sbjct: 433 QGFRWYQKAAEQEHVEAQYKLGYCYEKGTGVDSDLEMAFKFYQKAATLGSVKAQTNLALC 492
Query: 273 LEHGLG 278
E G+G
Sbjct: 493 YEKGIG 498
>gi|335419792|ref|ZP_08550839.1| Sel1 domain-containing protein [Salinisphaera shabanensis E1L3A]
gi|334896003|gb|EGM34161.1| Sel1 domain-containing protein [Salinisphaera shabanensis E1L3A]
Length = 325
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G F G GV ++ + A K A +G A + L+ + + EA + ++A
Sbjct: 44 GGAFAMGDGVVEDDEAAYRWLRKAAEQGHAAAQYNLFLLSTQKRDSENTLEAPVKWLQRA 103
Query: 164 AVLGDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A G QF L Y Q E A A+ GH AQ+ L C +G GV
Sbjct: 104 ANQGVLQAQFRLAEFYRQSRVKHKKRRERAAMYYAMAAKQGHASAQFYLGWCYDKGVGVT 163
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N +AARWYL+AA+ G V A N ++ Y G G+ S QAR+W RAA AQ
Sbjct: 164 QNESKAARWYLKAAKKGQVDAQVNLAVNYIDGRGVQKSQAQARRWFLRAAQQNSAIAQ-- 221
Query: 275 HGLGLFTE------GEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
+ LG ++ G +++A V+ LA G AA + ++ +S + RA V
Sbjct: 222 YNLGKLSQARASSRGNIIEAYVWTSLAAEQGLGAAIRERELLRSLISPSQLSRAQARVRR 281
Query: 329 WRAMPS 334
W + S
Sbjct: 282 WSKINS 287
>gi|290979302|ref|XP_002672373.1| predicted protein [Naegleria gruberi]
gi|284085949|gb|EFC39629.1| predicted protein [Naegleria gruberi]
Length = 370
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV + KA+ + K A + ++ A + G +Y E E A+ + ++
Sbjct: 88 GAAYQNGTGVDIDYKKAVYWYEKSAEQNNSEAQFNLGYLYQEGLGVPKNIEIALQFFEKS 147
Query: 164 AVLGDPAGQFNLGISYL----QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
A Q NLG+ YL + +A+ +AS G+ +AQY L RG V+ N
Sbjct: 148 ANQNHVKAQNNLGVQYLAIGDKSKALYWFKKASDNGYAKAQYNLGGFYARGDAVEKNPFT 207
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-HGKAQLEHGLG 278
A WYL++AEGGYV + +N + Y G G+ ++ +W+++AA G G H +
Sbjct: 208 AFDWYLKSAEGGYVHSQHNVGIMYFNGIGVKQDYQIGIQWLEKAASQGFQGSIAALHEI- 266
Query: 279 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
++ + V +LE G+ +A + + + D+A +
Sbjct: 267 --SKKDYSTDVNWLEQLANKGDVSAQNNLGAMYNMGTGVKEDKAKAI 311
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 38/215 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV KN++ AL F K A + A + G+ Y + K A+ +++A+ G
Sbjct: 124 GYLYQEGLGVPKNIEIALQFFEKSANQNHVKAQNNLGVQYLAIGDKSKALYWFKKASDNG 183
Query: 168 DPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
Q+NLG Y + +AV+ +++ G+V +Q+ + + G GV + Q
Sbjct: 184 YAKAQYNLGGFYARGDAVEKNPFTAFDWYLKSAEGGYVHSQHNVGIMYFNGIGVKQDYQI 243
Query: 220 AARWYLRAAEGGY------------------------------VRAMYNTSLCYSFGEGL 249
+W +AA G+ V A N Y+ G G+
Sbjct: 244 GIQWLEKAASQGFQGSIAALHEISKKDYSTDVNWLEQLANKGDVSAQNNLGAMYNMGTGV 303
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+A W+++AAD G+ + G GE
Sbjct: 304 KEDKAKAIYWLQKAADQGNDNSLFNLGAIYLNGGE 338
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%)
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
G N S + +++LL + G AQ L G GVD + ++A WY ++AE
Sbjct: 55 GFMNFFKSSPNKSSLELLQLQADTGDSIAQNNLGAAYQNGTGVDIDYKKAVYWYEKSAEQ 114
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 290
A +N Y G G+P + A ++ +++A+ H KAQ G+ G+ KA+
Sbjct: 115 NNSEAQFNLGYLYQEGLGVPKNIEIALQFFEKSANQNHVKAQNNLGVQYLAIGDKSKALY 174
Query: 291 YLELATRAGETAADH 305
+ + A+ G A +
Sbjct: 175 WFKKASDNGYAKAQY 189
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 144 GLM-YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------A 194
G M +++ ++++ L + A GD Q NLG +Y V + Y+ ++
Sbjct: 55 GFMNFFKSSPNKSSLELLQLQADTGDSIAQNNLGAAYQNGTGVDIDYKKAVYWYEKSAEQ 114
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
+ AQ+ L G GV N++ A +++ ++A +V+A N + Y L + +
Sbjct: 115 NNSEAQFNLGYLYQEGLGVPKNIEIALQFFEKSANQNHVKAQNNLGVQY-----LAIGDK 169
Query: 255 -QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
+A W K+A+D G+ KAQ G G + G+ ++
Sbjct: 170 SKALYWFKKASDNGYAKAQYNLG-GFYARGDAVE 202
>gi|29122957|gb|AAO65770.1| SEL1L [Rattus norvegicus]
Length = 615
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 208 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 267
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 268 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 327
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 328 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 387
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+ + AVV YL LA + E A + IL Q AT
Sbjct: 388 KDDDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 424
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 83 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 142
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 143 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 202
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 203 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 262
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 263 ADMGNPVGQ--SGLGM 276
>gi|417547764|ref|ZP_12198846.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
gi|417563991|ref|ZP_12214865.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|395555747|gb|EJG21748.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|400389513|gb|EJP52584.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
Length = 301
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W 148
NDA EA+ +L + G G + + KAL+ F K A GS+ AM+ GL+Y
Sbjct: 52 NDA-----EAIFVL--ASMYATGEGEKLDQKKALELFEKSAQLGSSNAMLQLGLIYRNGN 104
Query: 149 EMDKKE--AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVR 198
++ KK+ A+ + Q A G+P+ NLG+SY + +A K Q++ G ++
Sbjct: 105 DLIKKDDLKALKWFEQGAKKGNPSAIHNLGVSYYKGLGITEDKAKAFKYFSQSAELGLLQ 164
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
+Q +A L+ G GV + ++A W L+AA G V + N L Y G+G+ A+K
Sbjct: 165 SQVIVAGLLYNGEGVTKDHKKAFEWALKAANQGDVESQNNIGLAYENGDGVAKDPVLAKK 224
Query: 259 WMKRAADCGHGKAQLEHGLGLF----TEGEMMKAVVYLE 293
W ++AA+ G Q L F E K++ Y E
Sbjct: 225 WFEKAANNGSVLGQYNLALKYFDGNGVEQNFSKSIEYAE 263
>gi|145629738|ref|ZP_01785534.1| hypothetical protein CGSHi22121_00677 [Haemophilus influenzae
22.1-21]
gi|144978075|gb|EDJ87854.1| hypothetical protein CGSHi22121_00677 [Haemophilus influenzae
22.1-21]
Length = 219
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAG 195
GL +E + A L+ A GD QFNLG+ Y EAVK +A+ G
Sbjct: 36 GLTAYEQSDYQTAFKLWLPMAEQGDANVQFNLGVMYEDGLGVKQDDFEAVKWYRKAAEQG 95
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
H +AQ+ L + +G+GV + +A +WY +AAE GY A N YS G G+ + +
Sbjct: 96 HAKAQFNLGVMYAKGQGVKQDDFKAVKWYRKAAEQGYADAQANLGSAYSAGRGVRQDYIE 155
Query: 256 ARKWMKRAADCGHGKAQLEHGL 277
A KW K+AA+ G Q + GL
Sbjct: 156 AVKWFKKAAENGSADGQFKLGL 177
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 28/199 (14%)
Query: 85 SLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLD--KALDSFLKGAARGSTLAMVD 142
S +W DAL ++F+ G + D A +L A +G +
Sbjct: 19 SFQSTAWADALE------------QQFQQGLTAYEQSDYQTAFKLWLPMAEQGDANVQFN 66
Query: 143 AGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLY 189
G+MY + D EA + YR+AA G QFNLG+ Y + + AVK
Sbjct: 67 LGVMYEDGLGVKQDDFEA-VKWYRKAAEQGHAKAQFNLGVMYAKGQGVKQDDFKAVKWYR 125
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+A+ G+ AQ L GRGV + EA +W+ +AAE G + L Y G+ +
Sbjct: 126 KAAEQGYADAQANLGSAYSAGRGVRQDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQSI 185
Query: 250 PLSHRQARKWMKRAADCGH 268
A++W +A D G
Sbjct: 186 QKDRTLAKEWFGKACDNGE 204
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKE--A 155
+A V G ++ G GV+++ +A+ + K A +G A + G+MY + K++
Sbjct: 60 DANVQFNLGVMYEDGLGVKQDDFEAVKWYRKAAEQGHAKAQFNLGVMYAKGQGVKQDDFK 119
Query: 156 AISLYRQAAVLGDPAGQFNLGISYL------QE--EAVKLLYQASIAGHVRAQYQLALCL 207
A+ YR+AA G Q NLG +Y Q+ EAVK +A+ G Q++L L
Sbjct: 120 AVKWYRKAAEQGYADAQANLGSAYSAGRGVRQDYIEAVKWFKKAAENGSADGQFKLGLVY 179
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ + + A W+ +A + G R
Sbjct: 180 LIGQSIQKDRTLAKEWFGKACDNGEQRG 207
>gi|254451995|ref|ZP_05065432.1| Sel1 domain protein repeat-containing protein [Octadecabacter
arcticus 238]
gi|198266401|gb|EDY90671.1| Sel1 domain protein repeat-containing protein [Octadecabacter
arcticus 238]
Length = 455
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 107/251 (42%), Gaps = 33/251 (13%)
Query: 78 LPQLRAASLVC--KSWNDALRPLREAMVL---LRWGKRFKHGRGVRKNLDKALDSFLKGA 132
L A V K W RPL E + +G+ F +G GV + ++A+ F A
Sbjct: 9 LAAYDAGDFVTALKEW----RPLAEQGDVDAQYNFGRLFDNGEGVLLDDEEAVRWFRLAA 64
Query: 133 ARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQAAVLGDPAGQFNLGISY------ 179
+G A G+MY D E AI YR AA GD Q NLG SY
Sbjct: 65 EQGHARAQNTLGVMY---DYGEGVIQDDAKAIRWYRLAAEQGDARAQSNLGGSYNNGNGV 121
Query: 180 LQEEAVKLLYQ--ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
+Q+ AV + A+ GH AQ L G GV + EAA WY AAE G A
Sbjct: 122 VQDYAVAANWYRLAAEQGHANAQTNLGFMYDNGNGVMQDYSEAANWYRLAAEQGEANAQT 181
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYL 292
N Y+ G G+ + +A KW + AA+ GH AQ G ++ G + +A +
Sbjct: 182 NLGNMYNNGNGVVQDYAEAAKWYRLAAEQGHANAQTNLGF-MYDNGNGVMQDYSEAANWY 240
Query: 293 ELATRAGETAA 303
LA GE A
Sbjct: 241 RLAAEQGEANA 251
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 93/221 (42%), Gaps = 18/221 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA G + +G GV ++ +A + A +G A + G MY M
Sbjct: 176 EANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGHANAQTNLGFMYDNGNGVMQDYSE 235
Query: 156 AISLYRQAAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCL 207
A + YR AA G+ Q NLG Y +Q+ EA K A+ G AQ L
Sbjct: 236 AANWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGEANAQTNLGFMY 295
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV + EAA WY AAE G A N Y+ G G+ + +A KW + AA+ G
Sbjct: 296 DNGNGVMQDYSEAANWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQG 355
Query: 268 HGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 303
H AQ G ++ G + +A + LA GE A
Sbjct: 356 HANAQTNLGF-MYDNGNGVMQDYSEAANWYRLAAEQGEANA 395
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 91/213 (42%), Gaps = 18/213 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G GV ++ A + + A +G A + G MY M A + YR A
Sbjct: 112 GGSYNNGNGVVQDYAVAANWYRLAAEQGHANAQTNLGFMYDNGNGVMQDYSEAANWYRLA 171
Query: 164 AVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ Q NLG Y +Q+ EA K A+ GH AQ L G GV
Sbjct: 172 AEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGHANAQTNLGFMYDNGNGVMQ 231
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EAA WY AAE G A N Y+ G G+ + +A KW + AA+ G AQ
Sbjct: 232 DYSEAANWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGEANAQTNL 291
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAA 303
G ++ G + +A + LA GE A
Sbjct: 292 GF-MYDNGNGVMQDYSEAANWYRLAAEQGEANA 323
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 81/189 (42%), Gaps = 12/189 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA G + +G GV ++ +A + A +G A + G MY M
Sbjct: 248 EANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGEANAQTNLGFMYDNGNGVMQDYSE 307
Query: 156 AISLYRQAAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCL 207
A + YR AA G+ Q NLG Y +Q+ EA K A+ GH AQ L
Sbjct: 308 AANWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGHANAQTNLGFMY 367
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV + EAA WY AAE G A N Y+ G G+ + +A KW + AA+ G
Sbjct: 368 DNGNGVMQDYSEAANWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQG 427
Query: 268 HGKAQLEHG 276
AQ G
Sbjct: 428 EANAQTNLG 436
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLG--------ISYLQEEAVKLLYQASI 193
D GL ++ A+ +R A GD Q+N G + EEAV+ A+
Sbjct: 6 DKGLAAYDAGDFVTALKEWRPLAEQGDVDAQYNFGRLFDNGEGVLLDDEEAVRWFRLAAE 65
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
GH RAQ L + G GV + +A RWY AAE G RA N Y+ G G+ +
Sbjct: 66 QGHARAQNTLGVMYDYGEGVIQDDAKAIRWYRLAAEQGDARAQSNLGGSYNNGNGVVQDY 125
Query: 254 RQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 303
A W + AA+ GH AQ G ++ G + +A + LA GE A
Sbjct: 126 AVAANWYRLAAEQGHANAQTNLGF-MYDNGNGVMQDYSEAANWYRLAAEQGEANA 179
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 73/173 (42%), Gaps = 14/173 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
EA G + +G GV ++ +A + + A +G A + G MY D E
Sbjct: 284 EANAQTNLGFMYDNGNGVMQDYSEAANWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAE 343
Query: 155 AAISLYRQAAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALC 206
AA YR AA G Q NLG Y +Q+ EA A+ G AQ L
Sbjct: 344 AA-KWYRLAAEQGHANAQTNLGFMYDNGNGVMQDYSEAANWYRLAAEQGEANAQTNLGNM 402
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
+ G GV + EAA+WY AAE G A N Y+ G G+ + +A W
Sbjct: 403 YNNGNGVVQDYAEAAKWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAANW 455
>gi|421654930|ref|ZP_16095255.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
gi|408509684|gb|EKK11354.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
Length = 301
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W 148
NDA EA+ +L + G G + + KAL+ F K A GS+ AM+ GL+Y
Sbjct: 52 NDA-----EAIFVL--ASMYATGEGEKLDQKKALELFEKSAQLGSSNAMLQLGLIYRNGN 104
Query: 149 EMDKKE--AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVR 198
++ KK+ A+ + Q A G+P+ NLG+SY + +A K Q++ G ++
Sbjct: 105 DLIKKDDLKALKWFEQGAKKGNPSAIHNLGVSYYKGLGITEDNAKAFKYFSQSAELGLLQ 164
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
+Q +A L+ G GV + ++A W L+AA G V + N L Y G+G+ A+K
Sbjct: 165 SQVIVAGLLYNGEGVTKDHKKAFEWALKAANQGDVESQNNIGLAYENGDGVAKDPVLAKK 224
Query: 259 WMKRAADCGHGKAQLEHGLGLF----TEGEMMKAVVYLE 293
W ++AA+ G Q L F E K++ Y E
Sbjct: 225 WFEKAANNGSVLGQYNLALKYFDGNGVEQNFSKSIEYAE 263
>gi|403676044|ref|ZP_10938109.1| hypothetical protein ANCT1_15381 [Acinetobacter sp. NCTC 10304]
Length = 288
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVLGDPA 170
+ ++ ++ KA++ + A +G A + GL+Y + A Y +AA GD A
Sbjct: 76 KDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNGYIKPDYVKAKYWYEKAAAQGDIA 135
Query: 171 -----GQF---NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
G F LGI ++A K A+ AG AQ LA GRGV N EA++
Sbjct: 136 SLNKLGNFYSKGLGIKQDYQKATKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQ 195
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 278
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ G AQ G G
Sbjct: 196 WYLKAAVQGDIDAQYNLGLMYLLGDGIKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDG 255
Query: 279 LFTEGEMMKAVVYLELATRAGETAA 303
L + + A ++ E + G + A
Sbjct: 256 LGVDKNLSLARIWFEKSAEVGNSYA 280
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + + L + G + G G++++ KA +L A G + A + M+
Sbjct: 121 AKYWYEKAAAQGDIASLNKLGNFYSKGLGIKQDYQKATKYYLDAANAGDSDAQTNLATMF 180
Query: 148 WE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAG 195
K A Y +AAV GD Q+NLG+ YL + +K Y A+ G
Sbjct: 181 LHGRGVTQNKLEASQWYLKAAVQGDIDAQYNLGLMYLLGDGIKQDYAQAQKWFLSAANQG 240
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
AQY L G GVD NL A W+ ++AE G
Sbjct: 241 ESNAQYHLGKIYKDGLGVDKNLSLARIWFEKSAEVG 276
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 20/263 (7%)
Query: 25 KDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHDFASLPFDVLNKIAASFTLPQ-LRA 83
DN R + +S IK + RS K+ +G A V+ P L+A
Sbjct: 28 NDNTRQQ-QSSQTNTNIKNNIDLTDIRS-KAEKGDPEAQYNLGVMYAEGYKDIQPDILKA 85
Query: 84 ASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDA 143
S N + + LL G + ++ + KA + K AA+G ++
Sbjct: 86 IEWYTLSANQGYVNAQYNLGLLYMGNGY-----IKPDYVKAKYWYEKAAAQGDIASLNKL 140
Query: 144 GLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQA 191
G Y + + A Y AA GD Q NL G++ + EA + +A
Sbjct: 141 GNFYSKGLGIKQDYQKATKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQWYLKA 200
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
++ G + AQY L L G G+ + +A +W+L AA G A Y+ Y G G+
Sbjct: 201 AVQGDIDAQYNLGLMYLLGDGIKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDGLGVDK 260
Query: 252 SHRQARKWMKRAADCGHGKAQLE 274
+ AR W +++A+ G+ A E
Sbjct: 261 NLSLARIWFEKSAEVGNSYAAQE 283
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 161 RQAAVLGDPAGQFNLGISY------LQEEAVKLLYQASIA---GHVRAQYQLALCLHRGR 211
R A GDP Q+NLG+ Y +Q + +K + +++ G+V AQY L L L+ G
Sbjct: 53 RSKAEKGDPEAQYNLGVMYAEGYKDIQPDILKAIEWYTLSANQGYVNAQYNLGL-LYMGN 111
Query: 212 G-VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
G + + +A WY +AA G + ++ YS G G+ +++A K+ AA+ G
Sbjct: 112 GYIKPDYVKAKYWYEKAAAQGDIASLNKLGNFYSKGLGIKQDYQKATKYYLDAANAGDSD 171
Query: 271 AQLE------HGLGLFTEGEMMKAVVYLELATRA 298
AQ HG G+ T+ ++ + YL+ A +
Sbjct: 172 AQTNLATMFLHGRGV-TQNKLEASQWYLKAAVQG 204
>gi|421538567|ref|ZP_15984742.1| sel1 repeat protein [Neisseria meningitidis 93003]
gi|402316237|gb|EJU51786.1| sel1 repeat protein [Neisseria meningitidis 93003]
Length = 272
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA 155
A L G + +G+GVR++ +A F K A +G+ A + GLMY D +A
Sbjct: 43 AQAQLNLGWMYANGQGVRQDDAQATQWFRKSAEQGNAKAQFNLGLMYANGQGVRQDDAQA 102
Query: 156 AISLYRQAAVLGDPAGQFNLGISYL------QEEAVKLLY--QASIAGHVRAQYQLALCL 207
+ +R+AA G+ Q NLG+ Y Q++A L+ +A+ G AQ L
Sbjct: 103 -VQWFRKAAEQGNAQAQLNLGVMYYKGRGVRQDDAQAELWTRKAAEQGGANAQNNLGAMY 161
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G G + ++ +WY +AAE G A YN + Y+ G G+ + QA +W ++AA+ G
Sbjct: 162 AQGLGARQDYAQSVQWYRKAAEQGDAEAQYNLGVMYAQGLGVRQDYTQAVQWYRKAAEQG 221
Query: 268 HGKAQLEHGLGLFTEGEMMK 287
+AQ GL ++ +GE ++
Sbjct: 222 DAEAQYNLGL-MYYKGEGVR 240
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 12/177 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAAISLY-RQAAVL 166
+ +G+GVR++ +A+ F K A +G+ A ++ G+MY++ + + +A L+ R+AA
Sbjct: 89 YANGQGVRQDDAQAVQWFRKAAEQGNAQAQLNLGVMYYKGRGVRQDDAQAELWTRKAAEQ 148
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q NLG Y Q ++V+ +A+ G AQY L + +G GV +
Sbjct: 149 GGANAQNNLGAMYAQGLGARQDYAQSVQWYRKAAEQGDAEAQYNLGVMYAQGLGVRQDYT 208
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+A +WY +AAE G A YN L Y GEG+ A++W+ +A G+ K +H
Sbjct: 209 QAVQWYRKAAEQGDAEAQYNLGLMYYKGEGVRQDLALAQEWLGKACQNGYQKGCDKH 265
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 12/176 (6%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGV 213
QAA G+ Q NLG Y + V+ +++ G+ +AQ+ L L G+GV
Sbjct: 36 QAAEQGNAQAQLNLGWMYANGQGVRQDDAQATQWFRKSAEQGNAKAQFNLGLMYANGQGV 95
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +A +W+ +AAE G +A N + Y G G+ QA W ++AA+ G AQ
Sbjct: 96 RQDDAQAVQWFRKAAEQGNAQAQLNLGVMYYKGRGVRQDDAQAELWTRKAAEQGGANAQN 155
Query: 274 EHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
G GL + ++V + A G+ A + V+ Q +D V
Sbjct: 156 NLGAMYAQGLGARQDYAQSVQWYRKAAEQGDAEAQYNLGVMYAQGLGVRQDYTQAV 211
>gi|414877264|tpg|DAA54395.1| TPA: hypothetical protein ZEAMMB73_819280, partial [Zea mays]
Length = 237
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
A+WYLRAAEGG VRAMYN SLCYS+GEGL +A++W++ A DCGH K E G+ L
Sbjct: 1 AKWYLRAAEGGNVRAMYNISLCYSYGEGLAQDPVRAKRWLQLATDCGHKKTLYECGIKLC 60
Query: 281 T-------EGEMMKAVVYLELATRAG--ETAADHVKNVILQQLSATSRDRAMLV 325
G+ + V + A G E + + +++ LS RA+L+
Sbjct: 61 AVELLNPLNGDTLADVNTVGPAPNDGGAEGISCNFDRILMLILSLDLNSRALLL 114
>gi|169349791|ref|ZP_02866729.1| hypothetical protein CLOSPI_00529 [Clostridium spiroforme DSM 1552]
gi|169293359|gb|EDS75492.1| Sel1 repeat protein [Clostridium spiroforme DSM 1552]
Length = 743
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
++ G GV ++ KA + +LKGA G A+ + G Y EA A+ Y +AA L
Sbjct: 204 YEMGIGVEQDYQKAYELYLKGAKAGFPRAICNLGYCYEYGYGVEADIYQAVEYYIEAAKL 263
Query: 167 GDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G ++LG I E A K +A+ GH R+QY+LA C G G +
Sbjct: 264 GYSEAIYSLGTCFEFGEGIEQNDERAFKCYEEAANQGHERSQYRLANCYENGIGTPKDFI 323
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +A+ Y A+ + + CY G+G+ +QARK+ ++AA G+ + Q G
Sbjct: 324 KAFYWYKQASIKEYPPALISLATCYELGQGIEKDLKQARKYYQKAAHLGYARGQF--WFG 381
Query: 279 LFTE 282
F E
Sbjct: 382 YFYE 385
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
P+++ A+ C W + L+ G ++ G GV+KNL KA+D +L+ A
Sbjct: 388 PEIKNAAYRCTYWYRQASKQNDVQALVALGYCYESGFGVKKNLKKAVDLYLQAAKMNYAP 447
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVR 198
+ Y + +G+ +A+ + AS A + R
Sbjct: 448 GQCNLAYCY------------------------EIGIGVEVDLNKAIYYYHLASKANYPR 483
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
A L G+GV+ + Q+A YL+AA+ Y +Y T L Y G + + +A +
Sbjct: 484 AMCNLGYLYTHGQGVEVDHQKAFDLYLQAAKMNYAPGLYYTGLAYEEGNAVNVDIDKAIE 543
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEGEM-----MKAVVYLELATRAGETAADHVKNVILQQ 313
+ ++A D + A + LGL E + +KA+ Y + A + A + + L +
Sbjct: 544 YYQKATDLNYSAAM--YNLGLIYENNIDYHDDLKAIEYYQAAIEYNDARAMYRMALYLDE 601
Query: 314 LSATSRD 320
RD
Sbjct: 602 GQVIKRD 608
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 89/223 (39%), Gaps = 53/223 (23%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-------MDKKEAA 156
+ G + HG+GV + KA D +L+ A + GL Y E +DK A
Sbjct: 485 MCNLGYLYTHGQGVEVDHQKAFDLYLQAAKMNYAPGLYYTGLAYEEGNAVNVDIDK---A 541
Query: 157 ISLYRQAAVLGDPAGQFNLG------ISYLQEEAVKLLYQASIA-GHVRAQYQLALCLHR 209
I Y++A L A +NLG I Y + YQA+I RA Y++AL L
Sbjct: 542 IEYYQKATDLNYSAAMYNLGLIYENNIDYHDDLKAIEYYQAAIEYNDARAMYRMALYLDE 601
Query: 210 GRGVDFNLQ------------------------------------EAARWYLRAAEGGYV 233
G+ + +LQ EA R +L+AA GY
Sbjct: 602 GQVIKRDLQKAFDYIQSSANQAYSPALNMYGIYLENGLAGNKDMEEAYRCFLKAARAGYA 661
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
A+YN CY +G G+ + A + +A+D + +A G
Sbjct: 662 PAVYNLGRCYFYGIGIEIDKELAFELFCKASDSNYREASFMAG 704
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 25/253 (9%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-DKKEAAISL--- 159
L+ ++ G+G+ K+L +A + K A G G Y + K AA
Sbjct: 341 LISLATCYELGQGIEKDLKQARKYYQKAAHLGYARGQFWFGYFYENHPEIKNAAYRCTYW 400
Query: 160 YRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
YRQA+ D LG Y ++AV L QA+ + Q LA C G
Sbjct: 401 YRQASKQNDVQALVALGYCYESGFGVKKNLKKAVDLYLQAAKMNYAPGQCNLAYCYEIGI 460
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV+ +L +A +Y A++ Y RAM N Y+ G+G+ + H++A +AA +
Sbjct: 461 GVEVDLNKAIYYYHLASKANYPRAMCNLGYLYTHGQGVEVDHQKAFDLYLQAAKMNYAPG 520
Query: 272 QLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQ-------LSATSR 319
GL + EG ++ KA+ Y + AT +AA + +I + L A
Sbjct: 521 LYYTGLA-YEEGNAVNVDIDKAIEYYQKATDLNYSAAMYNLGLIYENNIDYHDDLKAIEY 579
Query: 320 DRAMLVVDSWRAM 332
+A + + RAM
Sbjct: 580 YQAAIEYNDARAM 592
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 53/221 (23%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----------MDKK 153
L G ++ G V ++DKA++ + K + AM + GL+Y ++
Sbjct: 521 LYYTGLAYEEGNAVNVDIDKAIEYYQKATDLNYSAAMYNLGLIYENNIDYHDDLKAIEYY 580
Query: 154 EAAI------SLYRQAAVLGD------------------------PAGQFNLGISYLQ-- 181
+AAI ++YR A L + PA N+ YL+
Sbjct: 581 QAAIEYNDARAMYRMALYLDEGQVIKRDLQKAFDYIQSSANQAYSPA--LNMYGIYLENG 638
Query: 182 -------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
EEA + +A+ AG+ A Y L C G G++ + + A + +A++ Y
Sbjct: 639 LAGNKDMEEAYRCFLKAARAGYAPAVYNLGRCYFYGIGIEIDKELAFELFCKASDSNYRE 698
Query: 235 AMYNTS-LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
A + +CY +G+G+ +A+K+ ++AA G +A+ E
Sbjct: 699 ASFMAGYMCY-YGDGVSKDVNKAKKFYQKAAKLGMKEAKDE 738
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+V A LA G GV+ + Q+A YL+ A+ G+ RA+ N CY +G G+ Q
Sbjct: 193 NVVASCNLAYFYEMGIGVEQDYQKAYELYLKGAKAGFPRAICNLGYCYEYGYGVEADIYQ 252
Query: 256 ARKWMKRAADCGHGKAQLEHGLGL-FTEG 283
A ++ AA G+ +A G F EG
Sbjct: 253 AVEYYIEAAKLGYSEAIYSLGTCFEFGEG 281
>gi|116750572|ref|YP_847259.1| Sel1 domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116699636|gb|ABK18824.1| Sel1 domain protein repeat-containing protein [Syntrophobacter
fumaroxidans MPOB]
Length = 255
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G G++++ +A + F K A +G+ LA G MY+ D +AA YR+
Sbjct: 67 GSMYLLGNGIQQDQSQAAEWFRKSAEQGNALAQTSLGAMYYLGQGVPGDHGQAA-EWYRK 125
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ + Q+NLG YL + +A++ +A+ G V AQ+ LA GRG+
Sbjct: 126 AAEQGEASAQYNLGNLYLLGHGVEKDEAQAMQWFRKAAEQGMVLAQFNLAGGYAEGRGLP 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +EAA+W +AAE G V A Y L Y G G+ R+A W+ AA G
Sbjct: 186 RDDREAAKWCRKAAEQGDVTAQYQLGLMYEAGRGVEKDRREAISWLTSAARKG 238
>gi|334144575|ref|YP_004537731.1| Sel1 domain-containing protein repeat-containing protein
[Thioalkalimicrobium cyclicum ALM1]
gi|333965486|gb|AEG32252.1| Sel1 domain protein repeat-containing protein [Thioalkalimicrobium
cyclicum ALM1]
Length = 364
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 22/229 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G V ++ ++A + + A +G T A G++Y D K+A I Y QAA
Sbjct: 85 YLNGLYVEQDYNQAAYWYEQAAEQGDTDAQFHLGVLYRSGLGVAQDYKQA-IYWYEQAAK 143
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD Q+ LG SYL + V Y QA+ G + AQ++L + G GV +L
Sbjct: 144 QGDADAQYFLGDSYLYGQGVTKDYNQAVFWYEQAAKQGRIYAQFRLGVMYGNGEGVKQDL 203
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ AA WY +AA+ GYVRA + + Y+ G G+ + QA W ++AA G AQ +GL
Sbjct: 204 KAAAYWYEQAAKQGYVRAQFILGVMYTDGLGVAEDYTQAVYWYEQAAKQGLFDAQ--YGL 261
Query: 278 G-LFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G ++ G + +A + + A + G+ + + V+ S +D
Sbjct: 262 GVMYINGTGVAQDYKQAFYWFKKAAKQGDAVSQNSLGVMYANGSGVKQD 310
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLH 208
+S QAA GD QF LG+ Y V+ Y QA+ G AQ+ LA+
Sbjct: 27 VSALEQAAKQGDAEAQFELGVKYYVGSGVEQDYNQAAYWYEQAAKQGFADAQFSLAVMYL 86
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G V+ + +AA WY +AAE G A ++ + Y G G+ ++QA W ++AA G
Sbjct: 87 NGLYVEQDYNQAAYWYEQAAEQGDTDAQFHLGVLYRSGLGVAQDYKQAIYWYEQAAKQGD 146
Query: 269 GKAQLEHGLG-LFTEG---EMMKAVVYLELATRAG 299
AQ G L+ +G + +AV + E A + G
Sbjct: 147 ADAQYFLGDSYLYGQGVTKDYNQAVFWYEQAAKQG 181
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V L QA+ G AQ++L + + G GV+ + +AA WY +AA+ G+ A ++ ++ Y
Sbjct: 27 VSALEQAAKQGDAEAQFELGVKYYVGSGVEQDYNQAAYWYEQAAKQGFADAQFSLAVMYL 86
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGE 300
G + + QA W ++AA+ G AQ G+ GL + +A+ + E A + G+
Sbjct: 87 NGLYVEQDYNQAAYWYEQAAEQGDTDAQFHLGVLYRSGLGVAQDYKQAIYWYEQAAKQGD 146
Query: 301 TAADH 305
A +
Sbjct: 147 ADAQY 151
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKE--AAISLYRQA 163
G + +G+GV K+ ++A+ + + A +G A G+MY E K++ AA Y QA
Sbjct: 154 GDSYLYGQGVTKDYNQAVFWYEQAAKQGRIYAQFRLGVMYGNGEGVKQDLKAAAYWYEQA 213
Query: 164 AVLGDPAGQFNLGISY-----LQEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDF 215
A G QF LG+ Y + E+ + +Y QA+ G AQY L + G GV
Sbjct: 214 AKQGYVRAQFILGVMYTDGLGVAEDYTQAVYWYEQAAKQGLFDAQYGLGVMYINGTGVAQ 273
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ ++A W+ +AA+ G + + + Y+ G G+ + A KW ++ G+
Sbjct: 274 DYKQAFYWFKKAAKQGDAVSQNSLGVMYANGSGVKQDYVAAYKWFNISSANGN 326
>gi|168334658|ref|ZP_02692803.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 648
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYR 161
R + +G G KNL + + K A + A G Y + +D E A Y+
Sbjct: 416 RIASAYIYGNGTEKNLIQGFRWYQKAAEQEHVEAQYKLGYCYEKGTGVDSDLEMAFKFYQ 475
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA LG Q NL + Y + ++A + +A+++G +AQ L G+G
Sbjct: 476 KAATLGSVKAQTNLALCYEKGIGTTLDLDKAFEWYVRAAVSGFAKAQNNLGYLYEXGKGA 535
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
N +A WY +AA G+ +A YN +LCY +G+G+ + + KW K +A+ G+ AQ
Sbjct: 536 TKNYSKAFEWYQKAAIQGHAKAQYNLALCYEYGKGVIKNLDETFKWFKESAEQGNMYAQY 595
Query: 274 EHG 276
G
Sbjct: 596 ALG 598
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 18/186 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM--VDAGLMYWEMDKKEAAISLYRQAAV 165
G + +G GV KN+ + F A +G A V +Y + +IS +
Sbjct: 316 GFGYTNGIGVTKNVARGFKWFKMAADQGHKNAQXEVSYAYIYEQASIVNTSISHDTLPLL 375
Query: 166 LGDPAGQFNLGISYLQE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
LG+ + + + L+ E KL+ + G AQY++A G G + NL
Sbjct: 376 LGNKSAEVKVITENLELIDNAELFENYKLMAER---GDATAQYRIASAYIYGNGTEKNLI 432
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------ 272
+ RWY +AAE +V A Y CY G G+ A K+ ++AA G KAQ
Sbjct: 433 QGFRWYQKAAEQEHVEAQYKLGYCYEKGTGVDSDLEMAFKFYQKAATLGSVKAQTNLALC 492
Query: 273 LEHGLG 278
E G+G
Sbjct: 493 YEKGIG 498
>gi|392967500|ref|ZP_10332918.1| hypothetical protein BN8_04191 [Fibrisoma limi BUZ 3]
gi|387844297|emb|CCH54966.1| hypothetical protein BN8_04191 [Fibrisoma limi BUZ 3]
Length = 640
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 136 STLAMVDA----GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------E 183
+ L+M D+ G Y+++ + AI Y++AA LG P GQ NLG Y E E
Sbjct: 446 AALSMADSCYEVGYQYYQVRDYKKAIYWYQKAANLGSPIGQTNLGYMYEHELGVARNYTE 505
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A+K +A+ AG+ Q L + G G + +A +WY AAE G N + Y
Sbjct: 506 ALKWYQKAATAGNADGQNNLGSMYYNGLGTSKDYTQALKWYRAAAEQGNAGGQINLGIMY 565
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAG 299
G G+ + +A KW RAA+ G+ Q G LG E KAV + ++ R G
Sbjct: 566 DEGHGVAANKTEALKWYMRAANQGNADGQYYVGTLYELGEGVEQNENKAVQWYRVSARQG 625
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQAAVLGDPAGQF 173
++ KA+ + K A GS + + G MY E + A A+ Y++AA G+ GQ
Sbjct: 465 RDYKKAIYWYQKAANLGSPIGQTNLGYMY-EHELGVARNYTEALKWYQKAATAGNADGQN 523
Query: 174 NLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
NLG Y +A+K A+ G+ Q L + G GV N EA +WY+
Sbjct: 524 NLGSMYYNGLGTSKDYTQALKWYRAAAEQGNAGGQINLGIMYDEGHGVAANKTEALKWYM 583
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
RAA G Y Y GEG+ + +A +W + +A G+ AQ
Sbjct: 584 RAANQGNADGQYYVGTLYELGEGVEQNENKAVQWYRVSARQGNRNAQ 630
>gi|313202401|ref|YP_004041059.1| sel1 domain-containing protein repeat-containing protein
[Methylovorus sp. MP688]
gi|312441717|gb|ADQ85823.1| Sel1 domain protein repeat-containing protein [Methylovorus sp.
MP688]
Length = 251
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY-----LQE---EAVKLLYQAS 192
VDAG K A ++YR+ A GD Q+NLG+ Y +QE EAVK ++
Sbjct: 40 VDAG-------KFAQAAAMYRELAAAGDAKAQYNLGLMYARGDGVQENPQEAVKWYRMSA 92
Query: 193 IAGHVRAQYQLALC-LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
G V AQY L + R GV + EA +WY +AAE G+VR+ N + Y G+ +P
Sbjct: 93 EQGFVEAQYALGVIYFSRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVVPQ 152
Query: 252 SHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 288
QA KW AA+ G AQ G ++ EGE + A
Sbjct: 153 DIPQALKWFGLAAEQGDSDAQFNLG-NMYLEGEGVPA 188
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+A + + + AG +AQY L L RG GV N QEA +WY +AE G+V A Y +
Sbjct: 47 QAAAMYRELAAAGDAKAQYNLGLMYARGDGVQENPQEAVKWYRMSAEQGFVEAQYALGVI 106
Query: 243 Y-SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 297
Y S G+ + + +A KW ++AA+ GH ++QL G+ G ++ +A+ + LA
Sbjct: 107 YFSRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVVPQDIPQALKWFGLAAE 166
Query: 298 AGETAAD-HVKNVILQ 312
G++ A ++ N+ L+
Sbjct: 167 QGDSDAQFNLGNMYLE 182
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 132 AARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQ------ 181
AA G A + GLMY D + A+ YR +A G Q+ LG+ Y
Sbjct: 56 AAAGDAKAQYNLGLMYARGDGVQENPQEAVKWYRMSAEQGFVEAQYALGVIYFSRDGGVA 115
Query: 182 ---EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+EA+K +A+ GHVR+Q L + RG V ++ +A +W+ AAE G A +N
Sbjct: 116 MDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVVPQDIPQALKWFGLAAEQGDSDAQFN 175
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQLEHGLGLFTEGEM 285
Y GEG+P S W+ AA+ HG++ + ++ E +M
Sbjct: 176 LGNMYLEGEGVPASMVNGYMWIWLAAENPQDAHGRSGKRKKILMYLEAKM 225
>gi|29612522|gb|AAH49959.1| Sel1l protein [Mus musculus]
Length = 569
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 15/218 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 162 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 221
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 222 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 281
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 282 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 341
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+ + AVV YL LA + E A + IL Q AT
Sbjct: 342 KDEDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 378
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 37 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 96
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 97 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 156
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 157 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 216
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 217 ADMGNPVGQ--SGLGM 230
>gi|163794217|ref|ZP_02188189.1| Sel1-like repeat [alpha proteobacterium BAL199]
gi|159180385|gb|EDP64906.1| Sel1-like repeat [alpha proteobacterium BAL199]
Length = 216
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ YR +A GDP F LG++ Q +EAV +++ AG AQ++L +
Sbjct: 25 AMRWYRDSARAGDPKAMFYLGLTLEQGLQDRPRPQEAVNWYRRSAEAGFALAQFKLGVLY 84
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+ V+ +L +A WY RAA G A YN ++ +G P +A ++AA+ G
Sbjct: 85 QTGQAVERDLAKARAWYERAAGQGMPSAQYNLAVLLETDDGGPADPARALDLYRKAAEFG 144
Query: 268 HGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
+A L G G E + ++A+ +L LA AG AA+ ++ +L L T R RA
Sbjct: 145 VSEAFLNLGNLYARGEGVEADAVEALKWLNLAVDAGVEAAETLRQSVLVVLDETDRARAR 204
Query: 324 LVVDSWRA 331
D W++
Sbjct: 205 EEADRWKS 212
>gi|328544856|ref|YP_004304965.1| Sel1-like repeat protein [Polymorphum gilvum SL003B-26A1]
gi|326414598|gb|ADZ71661.1| Sel1 repeat family [Polymorphum gilvum SL003B-26A1]
Length = 1345
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 31/223 (13%)
Query: 125 LDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--- 181
LD G A G +A GL E+ ++L R AA G+PA +F + ++Y +
Sbjct: 1044 LDPPAAGPAGGDVIA----GLPPEEI----GPMAL-RSAAASGNPAAEFQVAVNYTEGRG 1094
Query: 182 -----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
EA K +A++ G AQY+LA +GRGV +L +A WY RAA+ G +AM
Sbjct: 1095 VAADLSEAAKWYERAALQGLAPAQYRLASLYEKGRGVTKDLAKAREWYTRAAQAGNAKAM 1154
Query: 237 YNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVY 291
+N ++ ++ G +G P QA +W AAD G + H GL ++ ++ +
Sbjct: 1155 HNLAVLHAEGADGQP-DFEQAARWFTAAADYGIPDSLFNLGILHARGLGVTKDLGESYKW 1213
Query: 292 LELATRAGETAA----DHVKNVILQQLSATSRDRAMLVVDSWR 330
+A R G+ A D V N++ + A +R L VDS++
Sbjct: 1214 FAVAARQGDRDAAKKRDEVANMLDKDQLAAAR----LAVDSFK 1252
>gi|56552865|ref|YP_163704.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56544439|gb|AAV90593.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 336
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 20/224 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
+A L G + +G + + K++D + + A +G+ A ++ GLM+ D K
Sbjct: 107 DADAALALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDKTK 166
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKL-------LYQ-ASIAGHVRAQYQLALCL 207
A+ Y+QAA G+P + LG Y E V L YQ A+ G+ A+ L L
Sbjct: 167 ALYWYQQAADKGNPQAELILGNMYYNGETVPLDKTKAFEWYQKAANQGNAAAELNLGLMY 226
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV + ++ WY +AAE G +A Y+ Y G+G+ + +A W ++AA+
Sbjct: 227 AHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGVAVDKAKALSWYQQAAN-- 284
Query: 268 HGKAQLEHGLGL-FTEGEMM-----KAVVYLELATRAGETAADH 305
HG AQ E LG+ F GE + A +L+ A G A +
Sbjct: 285 HGLAQAELALGIMFYNGEGVTVDKNNAAYWLKQAANHGNDTAKY 328
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 20/244 (8%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAV 165
++ HG + KAL + A +G A G Y++ + K A+ Y+QA
Sbjct: 45 KYAHGDSSNIDKSKALTLIQQAANKGFAPAEYALGTFYYKGEAVAADKSKALYWYQQAVT 104
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD LG Y + ++V L QA+ G+ +AQ L L RG V +
Sbjct: 105 HGDADAALALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDK 164
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A WY +AA+ G +A Y GE +PL +A +W ++AA+ G+ A+L GL
Sbjct: 165 TKALYWYQQAADKGNPQAELILGNMYYNGETVPLDKTKAFEWYQKAANQGNAAAELNLGL 224
Query: 278 GLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAM 332
++ G+ + K++ + + A G+ A++ + + D+A + SW
Sbjct: 225 -MYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGVAVDKAKAL--SWYQQ 281
Query: 333 PSLH 336
+ H
Sbjct: 282 AANH 285
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
A L G F G V + KAL + + A +G+ A + G MY+ + K
Sbjct: 143 NAQAQLNLGLMFSRGDAVSLDKTKALYWYQQAADKGNPQAELILGNMYYNGETVPLDKTK 202
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKL-------LYQ-ASIAGHVRAQYQLALCL 207
A Y++AA G+ A + NLG+ Y + V L YQ A+ G +A+Y L
Sbjct: 203 AFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMY 262
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ G GV + +A WY +AA G +A + + GEG+ + A W+K+AA+ G
Sbjct: 263 YNGDGVAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTVDKNNAAYWLKQAANHG 322
Query: 268 HGKAQLE 274
+ A+ +
Sbjct: 323 NDTAKYQ 329
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G V + KA + + K A +G+ A ++ GLMY D K ++S Y++A
Sbjct: 187 GNMYYNGETVPLDKTKAFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKA 246
Query: 164 AVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD +++LG Y + V + QA+ G +A+ L + + G GV
Sbjct: 247 AEQGDAQAEYSLGNMYYNGDGVAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTV 306
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+ AA W +AA G A Y L ++
Sbjct: 307 DKNNAAYWLKQAANHGNDTAKYQLKLWFN 335
>gi|325267701|ref|ZP_08134352.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
gi|324980825|gb|EGC16486.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
Length = 380
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 129 LKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-- 181
L+ A RG+ A + G+MY D EA + YR AA G Q NLG+ Y
Sbjct: 66 LQLAERGNAQAQFNLGMMYENGQGVRQDDAEA-VKWYRLAAEQGYAPAQSNLGVMYENGQ 124
Query: 182 ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
EAVK QA+ G AQ L + + GRGV + EA +WY AAE G+ +A
Sbjct: 125 GVRQDDAEAVKWYQQAAAQGLAEAQSNLGVMYYNGRGVRQDDAEAVKWYRLAAEQGFAQA 184
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
N + Y G+G+ + +A KW ++AA+ G AQ GL +++ G
Sbjct: 185 QSNLGVMYDNGQGVRQDYTEAFKWFRQAAEQGVASAQYNLGL-MYSNG 231
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +++G+GVR++ +A+ + + AA+G A + G+MY+ D EA + YR
Sbjct: 117 GVMYENGQGVRQDDAEAVKWYQQAAAQGLAEAQSNLGVMYYNGRGVRQDDAEA-VKWYRL 175
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG+ Y EA K QA+ G AQY L L GRGV
Sbjct: 176 AAEQGFAQAQSNLGVMYDNGQGVRQDYTEAFKWFRQAAEQGVASAQYNLGLMYSNGRGVR 235
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA +W+ +AA G+ +A YN Y G+G+ +A KW ++AA G AQ
Sbjct: 236 QDDAEAVKWFQQAAAQGFAQAQYNLGTMYENGQGVRQDDAEAVKWYRQAAAQGDAPAQTN 295
Query: 275 HGLGLFT 281
G+ T
Sbjct: 296 LGVMYVT 302
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 81 LRAASLVCKSWNDALRPLREAMVL---------LRWGKRFKHGRGVRKNLDKALDSFLKG 131
L A L +W + + RE + L G +++G+GVR++ +A+ +
Sbjct: 45 LSALGLNQAAWTNDVSNSRETLQLAERGNAQAQFNLGMMYENGQGVRQDDAEAVKWYRLA 104
Query: 132 AARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ----- 181
A +G A + G+MY D E A+ Y+QAA G Q NLG+ Y
Sbjct: 105 AEQGYAPAQSNLGVMYENGQGVRQDDAE-AVKWYQQAAAQGLAEAQSNLGVMYYNGRGVR 163
Query: 182 ---EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
EAVK A+ G +AQ L + G+GV + EA +W+ +AAE G A YN
Sbjct: 164 QDDAEAVKWYRLAAEQGFAQAQSNLGVMYDNGQGVRQDYTEAFKWFRQAAEQGVASAQYN 223
Query: 239 TSLCYSFGEGLPLSHRQARKW 259
L YS G G+ +A KW
Sbjct: 224 LGLMYSNGRGVRQDDAEAVKW 244
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+GVR++ +A F + A +G A + GLMY D EA + ++Q
Sbjct: 189 GVMYDNGQGVRQDYTEAFKWFRQAAEQGVASAQYNLGLMYSNGRGVRQDDAEA-VKWFQQ 247
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q+NLG Y EAVK QA+ G AQ L + GRGV
Sbjct: 248 AAAQGFAQAQYNLGTMYENGQGVRQDDAEAVKWYRQAAAQGDAPAQTNLGVMYVTGRGVH 307
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ EA +W+ +AAE GY A Y G+G+ +A KW ++AA+ G AQ+
Sbjct: 308 QDDAEAVKWFQQAAEQGYSPAQVLLGAMYKNGQGVRQDDAEAVKWYRQAAEQGFAPAQV 366
>gi|260654116|ref|ZP_05859606.1| TPR repeat SEL1 family protein [Jonquetella anthropi E3_33 E1]
gi|260631101|gb|EEX49295.1| TPR repeat SEL1 family protein [Jonquetella anthropi E3_33 E1]
Length = 287
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLY 160
R G + G GV K+ K L + +A G A G Y +D+ +A LY
Sbjct: 32 RLGWAYMIGDGVEKDQQKGLTWLNRASAAGDPEAQFMLGCCYHFGMAVPIDRAKAQ-ELY 90
Query: 161 RQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R AA G FNLG Y + EAVK +A+ GH RA + LALC G G
Sbjct: 91 RSAAGSGHAGAAFNLGNMYYFGDGVAENRAEAVKWFEEAASRGHARAMFSLALCCASGDG 150
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +AA WY +AAE G RA ++ Y G+G+P +A W K AA+ G +AQ
Sbjct: 151 VAPDKAKAAEWYAKAAEAGDPRAQFHLGSAYETGDGVPRDRVKALSWYKAAAEGGDPRAQ 210
>gi|424845479|ref|ZP_18270090.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
gi|363986917|gb|EHM13747.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
Length = 293
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLY 160
R G + G GV K+ K L + +A G A G Y +D+ +A LY
Sbjct: 38 RLGWAYMIGDGVEKDQQKGLTWLNRASAAGDPEAQFMLGCCYHFGMAVPIDRAKAQ-ELY 96
Query: 161 RQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R AA G FNLG Y + EAVK +A+ GH RA + LALC G G
Sbjct: 97 RSAAGSGHAGAAFNLGNMYYFGDGVAENRAEAVKWFEEAASRGHARAMFSLALCCASGDG 156
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +AA WY +AAE G RA ++ Y G+G+P +A W K AA+ G +AQ
Sbjct: 157 VAPDKAKAAEWYAKAAEAGDPRAQFHLGSAYETGDGVPRDRVKALSWYKAAAEGGDPRAQ 216
>gi|56550964|ref|YP_161803.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542538|gb|AAV88692.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 375
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV +N A + K A +G A + G MY +AA++ ++A
Sbjct: 85 GALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRA 144
Query: 164 AVLGDPAGQFNLGISYLQ-------EEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
A GD Q NLG Y Q + + YQ A+ G+ A+Y L + +G+GV
Sbjct: 145 AGQGDKVAQTNLGDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQ 204
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
++ AA WY +AA+ + A YN + Y G+G+ + A W ++AAD G KAQL
Sbjct: 205 DMATAATWYQKAADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLN 263
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
N+ SY Q A + +A+ GH AQ+ L RG+GV N + A WY +AA+ G+V
Sbjct: 57 NVAQSYSQ--AREYFQKAADLGHAEAQFYLGALYERGKGVARNYKTAFSWYQKAADQGFV 114
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAV 289
+A N Y +G G+P + + A W++RAA G AQ G GL T E A
Sbjct: 115 KAENNVGSMYQYGVGVPQNFQAALTWLQRAAGQGDKVAQTNLGDMYYQGLGTPQEYKTAA 174
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRA 322
++ + A G A++ V+ Q ++D A
Sbjct: 175 IWYQKAAAQGYALAEYNLGVMYSQGQGVTQDMA 207
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + A + K AA+G LA + G+MY + A + Y++A
Sbjct: 157 GDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQDMATAATWYQKA 216
Query: 164 AVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLA-LCLHRGRGVD 214
A PA ++N+ Y +Q++ V L + +A+ G V+AQ LA L H+ +G
Sbjct: 217 ADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLNLASLLYHQAKGKS 276
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N +EAA WY +AA G V A++ GEG + A W AA G
Sbjct: 277 QNYKEAALWYQKAAAQGDVVALFMLGKMAHLGEGAARNDVDAYMWFSLAAGLG 329
>gi|260753360|ref|YP_003226253.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552723|gb|ACV75669.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 375
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV +N A + K A +G A + G MY +AA++ ++A
Sbjct: 85 GALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRA 144
Query: 164 AVLGDPAGQFNLGISYLQ-------EEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
A GD Q NLG Y Q + + YQ A+ G+ A+Y L + +G+GV
Sbjct: 145 AGQGDKVAQTNLGDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQ 204
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
++ AA WY +AA+ + A YN + Y G+G+ + A W ++AAD G KAQL
Sbjct: 205 DMATAATWYQKAADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLN 263
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
N+ SY Q A + +A+ GH AQ+ L RG+GV N + A WY +AA+ G+V
Sbjct: 57 NVAQSYSQ--AREYFQKAADLGHAEAQFYLGALYERGKGVARNYKTAFSWYQKAADQGFV 114
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAV 289
+A N Y +G G+P + + A W++RAA G AQ G GL T E A
Sbjct: 115 KAENNVGSMYQYGVGVPQNFQAALTWLQRAAGQGDKVAQTNLGDMYYQGLGTPQEYKTAA 174
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRA 322
++ + A G A++ V+ Q ++D A
Sbjct: 175 IWYQKAAAQGYALAEYNLGVMYSQGQGVTQDMA 207
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + A + K AA+G LA + G+MY + A + Y++A
Sbjct: 157 GDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQDMATAATWYQKA 216
Query: 164 AVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLA-LCLHRGRGVD 214
A PA ++N+ Y +Q++ V L + +A+ G V+AQ LA L H+ +G
Sbjct: 217 ADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLNLASLLYHQAKGKS 276
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N +EAA WY +AA G V A++ GEG + A W AA G
Sbjct: 277 QNYKEAALWYQKAAAQGDVVALFMLGKMAHLGEGAARNDVDAYMWFSLAAGLG 329
>gi|32169828|emb|CAD99199.1| hypothetical protein [Mucor circinelloides]
Length = 202
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 132 AARGSTLAMVDAGLMYWEM----DKKEAAISLYRQAAVLGDPAGQFNLGISY-----LQE 182
A +G+ A G Y + K A YRQ+A G P Q NLG + ++
Sbjct: 6 AEQGNAFAQNSLGYCYEDGIGVPQDKTVAADWYRQSAEQGYPWAQCNLGYCHQNGIGAEK 65
Query: 183 EAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+ VK Y QA+ GH RAQ+ L C H G GV NLQ A WY ++A G + A ++
Sbjct: 66 DTVKGAYWYGQAARQGHARAQHNLGFCYHNGIGVTRNLQMAVAWYKKSANQGNIFAYHSL 125
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
C+ G G+ ++ R++ W R+A+ H AQL GL
Sbjct: 126 GYCFQNGLGVEVNLRESCYWYFRSAEHNHAPAQLSLGL 163
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 4/126 (3%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G+ AQ L C G GV + AA WY ++AE GY A N C+ G G
Sbjct: 5 AAEQGNAFAQNSLGYCYEDGIGVPQDKTVAADWYRQSAEQGYPWAQCNLGYCHQNGIGAE 64
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHV 306
+ W +AA GH +AQ G G+ + AV + + + G A H
Sbjct: 65 KDTVKGAYWYGQAARQGHARAQHNLGFCYHNGIGVTRNLQMAVAWYKKSANQGNIFAYHS 124
Query: 307 KNVILQ 312
Q
Sbjct: 125 LGYCFQ 130
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 24/136 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G GV +NL A+ + K A +G+ A G +
Sbjct: 90 GFCYHNGIGVTRNLQMAVAWYKKSANQGNIFAYHSLGYCF-------------------- 129
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
Q LG+ E+ ++++ H AQ L LC G GV N +EA +W+ +
Sbjct: 130 ----QNGLGVEVNLRESCYWYFRSAEHNHAPAQLSLGLCFRNGMGVQKNEEEACKWFRLS 185
Query: 228 AEGGYVRAMYNTSLCY 243
A G A + CY
Sbjct: 186 ALQGNPLAQNSLGFCY 201
>gi|329119951|ref|ZP_08248623.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327463864|gb|EGF10178.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 354
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 95 LRPLREAMVLL----RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE- 149
++PL + +++ G + HGRGV +N +A F K A +G + + G+M E
Sbjct: 56 MQPLAQQGIIVSAQHNLGLLYFHGRGVAQNYQQAAAWFQKAADQGYADSQFNLGIMSAEG 115
Query: 150 ---MDKKEAAISLYRQAAVLGDPAGQF--------NLGISYLQEEAVKLLYQASIAGHVR 198
M + A + +++AA G QF LG+ ++A +A+ GH
Sbjct: 116 LGMMQNHQQAATWFQKAAGQGHADAQFRLAKLYAWGLGVPQNHQQAAAWFQKAANQGHAD 175
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ LA G GV + Q+AA W+ +AAE G+ +A Y G+G+ +++QA
Sbjct: 176 AQLFLASMYAEGIGVAQDRQQAAAWFQKAAEQGHAKAQVYLGSMYRTGDGVKRNYQQALA 235
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
W ++AA+ G AQ GL ++ GE +K
Sbjct: 236 WYRKAANQGDADAQFYLGL-MYRIGEGVK 263
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 16/130 (12%)
Query: 160 YRQAAVLGDP--------AGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQL 203
Y+QA L P + Q NLG+ Y V YQ + A G+ +Q+ L
Sbjct: 49 YQQAFHLMQPLAQQGIIVSAQHNLGLLYFHGRGVAQNYQQAAAWFQKAADQGYADSQFNL 108
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
+ G G+ N Q+AA W+ +AA G+ A + + Y++G G+P +H+QA W ++A
Sbjct: 109 GIMSAEGLGMMQNHQQAATWFQKAAGQGHADAQFRLAKLYAWGLGVPQNHQQAAAWFQKA 168
Query: 264 ADCGHGKAQL 273
A+ GH AQL
Sbjct: 169 ANQGHADAQL 178
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISL 159
R K + G GV +N +A F K A +G A + MY E D+++AA +
Sbjct: 142 FRLAKLYAWGLGVPQNHQQAAAWFQKAANQGHADAQLFLASMYAEGIGVAQDRQQAA-AW 200
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGR 211
+++AA G Q LG Y + VK YQ ++A G AQ+ L L G
Sbjct: 201 FQKAAEQGHAKAQVYLGSMYRTGDGVKRNYQQALAWYRKAANQGDADAQFYLGLMYRIGE 260
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
GV N Q+A WY +AA+ G A + Y+ GEG+ + +QA +W +
Sbjct: 261 GVKRNYQQALAWYRKAADQGQADAQNELGIMYAAGEGVAKNDQQAIEWFNK 311
>gi|421674889|ref|ZP_16114817.1| Sel1 repeat protein [Acinetobacter baumannii OIFC065]
gi|421692982|ref|ZP_16132631.1| Sel1 repeat protein [Acinetobacter baumannii IS-116]
gi|404559245|gb|EKA64510.1| Sel1 repeat protein [Acinetobacter baumannii IS-116]
gi|410383577|gb|EKP36106.1| Sel1 repeat protein [Acinetobacter baumannii OIFC065]
Length = 292
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKE--AAISLYRQAAVLGDPA 170
+ ++ ++ KA++ + A +G A + GL+Y E K + A Y +AA GD A
Sbjct: 80 KDIQADILKAIEWYTLSANQGYVNAQYNLGLLYKGNEYIKPDYVKAKYWYEKAAAQGDIA 139
Query: 171 -----GQF---NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
G F LGI ++A+K A+ AG AQ LA GRGV N EA++
Sbjct: 140 SLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQ 199
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 278
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ AQ G G
Sbjct: 200 WYLKAAVQGDIDAQYNLGLMYFLGDGIKQDYSQAQKWFLAAANQEESNAQYHLGKIYKDG 259
Query: 279 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 315
L + ++ A +L+ + AG + A LQ+LS
Sbjct: 260 LGVDKDLSLARTWLKKSAEAGNSYA-------LQELS 289
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 32/168 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G++++ KA+ +L A G + A + M+ K A Y +A
Sbjct: 145 GNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQWYLKA 204
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
AV GD Q+NLG+ Y G G+ + +A +W
Sbjct: 205 AVQGDIDAQYNLGLMYF----------------------------LGDGIKQDYSQAQKW 236
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+L AA A Y+ Y G G+ AR W+K++A+ G+ A
Sbjct: 237 FLAAANQEESNAQYHLGKIYKDGLGVDKDLSLARTWLKKSAEAGNSYA 284
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 167 GDPAGQFNLGISY------LQEEAVKLLYQASIA---GHVRAQYQLALCLHRGRGVDFNL 217
GD Q+NLG+ Y +Q + +K + +++ G+V AQY L L + +
Sbjct: 63 GDSEAQYNLGVMYAEGYKDIQADILKAIEWYTLSANQGYVNAQYNLGLLYKGNEYIKPDY 122
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE--- 274
+A WY +AA G + ++ YS G G+ +++A K+ AA+ G AQ
Sbjct: 123 VKAKYWYEKAAAQGDIASLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLAT 182
Query: 275 ---HGLGLFTEGEMMKAVVYLELATRA 298
HG G+ T+ ++ + YL+ A +
Sbjct: 183 MFLHGRGV-TQNKLEASQWYLKAAVQG 208
>gi|384411679|ref|YP_005621044.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932053|gb|AEH62593.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 375
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV +N A + K A +G A + G MY +AA++ ++A
Sbjct: 85 GALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRA 144
Query: 164 AVLGDPAGQFNLGISYLQ-------EEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
A GD Q NLG Y Q + + YQ A+ G+ A+Y L + +G+GV
Sbjct: 145 AGQGDKVAQTNLGDMYYQGLGTAQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQ 204
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
++ AA WY +AA+ + A YN + Y G+G+ + A W ++AAD G KAQL
Sbjct: 205 DMATAATWYQKAADQKFPAAEYNIAYLYEKGQGVVQDQKIALAWYQKAADQGFVKAQLNL 264
Query: 276 GLGLFTEGE-----MMKAVVYLELATRAGETAA 303
L+ + + +AV++ + A G+ A
Sbjct: 265 ASLLYHQAKGKSQNYKEAVLWYQKAAAQGDVVA 297
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
N+ SY Q A + +A+ GH AQ+ L RG+GV N + A WY +AA+ G+V
Sbjct: 57 NVAQSYSQ--AREYFQKAADLGHAEAQFYLGALYERGKGVARNYKTAFSWYQKAADQGFV 114
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAV 289
+A N Y +G G+P + + A W++RAA G AQ G GL T E A
Sbjct: 115 KAENNVGSMYQYGVGVPQNFQAALTWLQRAAGQGDKVAQTNLGDMYYQGLGTAQEYKTAA 174
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRA 322
++ + A G A++ V+ Q ++D A
Sbjct: 175 IWYQKAAAQGYALAEYNLGVMYSQGQGVTQDMA 207
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + A + K AA+G LA + G+MY + A + Y++A
Sbjct: 157 GDMYYQGLGTAQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQDMATAATWYQKA 216
Query: 164 AVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLA-LCLHRGRGVD 214
A PA ++N+ Y +Q++ + L + +A+ G V+AQ LA L H+ +G
Sbjct: 217 ADQKFPAAEYNIAYLYEKGQGVVQDQKIALAWYQKAADQGFVKAQLNLASLLYHQAKGKS 276
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N +EA WY +AA G V A++ GEG + A W AA G
Sbjct: 277 QNYKEAVLWYQKAAAQGDVVALFMLGKMAHLGEGAARNDVDAYMWFSLAAGLG 329
>gi|222056239|ref|YP_002538601.1| Sel1 domain-containing protein repeat-containing protein [Geobacter
daltonii FRC-32]
gi|221565528|gb|ACM21500.1| Sel1 domain protein repeat-containing protein [Geobacter daltonii
FRC-32]
Length = 171
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Query: 155 AAISLYRQAAVLGDPAGQFNLGI-SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA+ L V+G F G+ +Y ++E L + G A Y L++ RG GV
Sbjct: 8 AAVCLILCCTVVGTAGADFKTGLDAYQRKEYQTALKELKADGGADASYVLSVMYFRGEGV 67
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ N EA +W R+AE G VRA YN + Y G+G+ A KW +RAA+ GH ++Q
Sbjct: 68 EPNKTEALKWLQRSAEKGLVRAQYNLGMMYDKGDGVARDMAAAAKWYRRAAEKGHAQSQF 127
Query: 274 EHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQ 313
GL ++T GE + +A+ +L A R G A + V+ ++
Sbjct: 128 NLGL-MYTNGEGVEKDKQEAMKWLRKAARQGHGKARKLLKVMSEK 171
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDP 169
G GV N +AL + A +G A + G+MY + D AA YR+AA G
Sbjct: 64 GEGVEPNKTEALKWLQRSAEKGLVRAQYNLGMMYDKGDGVARDMAAAAKWYRRAAEKGHA 123
Query: 170 AGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQ 200
QFNLG+ Y ++EA+K L +A+ GH +A+
Sbjct: 124 QSQFNLGLMYTNGEGVEKDKQEAMKWLRKAARQGHGKAR 162
>gi|309751055|gb|ADO81039.1| Putative TPR repeat protein [Haemophilus influenzae R2866]
Length = 219
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAG 195
G +E + A L+ A GD QFNLG+ Y + EAVK +A+ G
Sbjct: 36 GSTAYEQSDYQTAFKLWLPMAEQGDANVQFNLGVMYAKGQGVKQDDFEAVKWYRKAAEQG 95
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
H +AQ+ L + +G+GV + +A +WY +AAE GY A N YS G G+ + +
Sbjct: 96 HAKAQFNLGVMYAKGQGVKQDDFKAVKWYRKAAEQGYADAQANLGSAYSAGRGVRQDYIE 155
Query: 256 ARKWMKRAADCGHGKAQLEHGL 277
A KW K+AA+ G Q + GL
Sbjct: 156 AVKWFKKAAENGSADGQFKLGL 177
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 109 KRFKHGRGVRKNLD--KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYR 161
++F+ G + D A +L A +G + G+MY + D EA + YR
Sbjct: 31 QQFQQGSTAYEQSDYQTAFKLWLPMAEQGDANVQFNLGVMYAKGQGVKQDDFEA-VKWYR 89
Query: 162 QAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA G QFNLG+ Y + + AVK +A+ G+ AQ L GRGV
Sbjct: 90 KAAEQGHAKAQFNLGVMYAKGQGVKQDDFKAVKWYRKAAEQGYADAQANLGSAYSAGRGV 149
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ EA +W+ +AAE G + L Y G+ + A++W +A D G
Sbjct: 150 RQDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQSIQKDRTLAKEWFGKACDNGE 204
>gi|223935677|ref|ZP_03627593.1| Sel1 domain protein repeat-containing protein [bacterium Ellin514]
gi|223895685|gb|EEF62130.1| Sel1 domain protein repeat-containing protein [bacterium Ellin514]
Length = 254
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 20/188 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLY 160
G ++ G+G +++ +A+ + A + + A G+ Y E+ + A +
Sbjct: 30 GICYQTGQGTQQDYVEAVKWLRRAAEQEDSAAQCYLGVCYQAGLGVPQELGQ---ATRWF 86
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA GDPA QFNLG+ Y EA K + A+ G +AQ+ L + G+
Sbjct: 87 REAAEQGDPAAQFNLGVCYETGQGVPQNYAEAFKWYHAAAERGEPQAQFNLGVFYESGQV 146
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +EA +WYL +AE A N LCY G G+ + A KW +AA G AQ
Sbjct: 147 VPQDYEEAVKWYLASAEQETAPAQCNLGLCYQTGRGVEKNEAMAVKWFCKAARQGDKTAQ 206
Query: 273 LEHGLGLF 280
H LGL+
Sbjct: 207 --HNLGLY 212
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 161 RQAAVLGDPAGQFNLGISY-----LQE---EAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA GD A Q LGI Y Q+ EAVK L +A+ AQ L +C G G
Sbjct: 15 KKAAESGDAASQCYLGICYQTGQGTQQDYVEAVKWLRRAAEQEDSAAQCYLGVCYQAGLG 74
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V L +A RW+ AAE G A +N +CY G+G+P ++ +A KW AA+ G +AQ
Sbjct: 75 VPQELGQATRWFREAAEQGDPAAQFNLGVCYETGQGVPQNYAEAFKWYHAAAERGEPQAQ 134
Query: 273 LEHGLGLFTEGEMMKAVVYLE-----LATRAGETAADHVK-NVILQQLSATSRDRAMLV 325
LG+F E + Y E LA+ ETA + Q ++ AM V
Sbjct: 135 F--NLGVFYESGQVVPQDYEEAVKWYLASAEQETAPAQCNLGLCYQTGRGVEKNEAMAV 191
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 12/162 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYL------QE--EAVKLLYQASIAGHVRAQYQLALCL 207
A+ R+AA D A Q LG+ Y QE +A + +A+ G AQ+ L +C
Sbjct: 46 AVKWLRRAAEQEDSAAQCYLGVCYQAGLGVPQELGQATRWFREAAEQGDPAAQFNLGVCY 105
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV N EA +WY AAE G +A +N + Y G+ +P + +A KW +A+
Sbjct: 106 ETGQGVPQNYAEAFKWYHAAAERGEPQAQFNLGVFYESGQVVPQDYEEAVKWYLASAEQE 165
Query: 268 HGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 305
AQ GL G E AV + A R G+ A H
Sbjct: 166 TAPAQCNLGLCYQTGRGVEKNEAMAVKWFCKAARQGDKTAQH 207
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G ++ G GV + L +A F + A +G A + G+ Y E + A Y
Sbjct: 66 GVCYQAGLGVPQELGQATRWFREAAEQGDPAAQFNLGVCY-ETGQGVPQNYAEAFKWYHA 124
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+P QFNLG+ Y EEAVK ++ AQ L LC GRGV+
Sbjct: 125 AAERGEPQAQFNLGVFYESGQVVPQDYEEAVKWYLASAEQETAPAQCNLGLCYQTGRGVE 184
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
N A +W+ +AA G A +N L Y+
Sbjct: 185 KNEAMAVKWFCKAARQGDKTAQHNLGLYYA 214
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L +A+ +G +Q L +C G+G + EA +W RAAE A +CY G
Sbjct: 14 LKKAAESGDAASQCYLGICYQTGQGTQQDYVEAVKWLRRAAEQEDSAAQCYLGVCYQAGL 73
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
G+P QA +W + AA+ G AQ G+
Sbjct: 74 GVPQELGQATRWFREAAEQGDPAAQFNLGV 103
>gi|77166163|ref|YP_344688.1| Sel1 repeat-containing protein [Nitrosococcus oceani ATCC 19707]
gi|254435232|ref|ZP_05048739.1| Sel1 repeat family [Nitrosococcus oceani AFC27]
gi|76884477|gb|ABA59158.1| Sel1-like repeat protein [Nitrosococcus oceani ATCC 19707]
gi|207088343|gb|EDZ65615.1| Sel1 repeat family [Nitrosococcus oceani AFC27]
Length = 241
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQ 190
A VDAG ++ E A+ + A GD QF +G+ Y EEA K +
Sbjct: 33 ADVDAGREAYKSQDYELALKEFMPLAEQGDENAQFYMGLMYANGYGLPKDPEEADKWFEK 92
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
S V A++ L + ++G+ V N+++A W+ +AA G A +N Y G G+P
Sbjct: 93 FSEHLDVSAKFNLGIMYYQGKSVPKNVEKAIAWFKKAAAEGDAEAQFNLGFIYDNGYGVP 152
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADH 305
+A KW + AA+ G +AQ G+ +++EG + ++A + +A + G+ A+
Sbjct: 153 QDREEALKWYRDAANQGIVEAQNNLGV-MYSEGQGIAKDYVQAYFWFNVAAKQGDKNAEK 211
Query: 306 VKNVILQQLSATSRDRAMLVVDSWR 330
+++ + + ++ + A+ + W+
Sbjct: 212 IRDTLAKDMNTSQMAEAIKLTHEWQ 236
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 32/169 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G G+ K+ ++A F K + A + G+MY++ E AI+ +++A
Sbjct: 70 GLMYANGYGLPKDPEEADKWFEKFSEHLDVSAKFNLGIMYYQGKSVPKNVEKAIAWFKKA 129
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
A GD QFNLG Y G GV + +EA +W
Sbjct: 130 AAEGDAEAQFNLGFIY----------------------------DNGYGVPQDREEALKW 161
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
Y AA G V A N + YS G+G+ + QA W AA G A+
Sbjct: 162 YRDAANQGIVEAQNNLGVMYSEGQGIAKDYVQAYFWFNVAAKQGDKNAE 210
>gi|163803482|ref|ZP_02197353.1| Sel1 domain protein repeat-containing protein [Vibrio sp. AND4]
gi|159172700|gb|EDP57550.1| Sel1 domain protein repeat-containing protein [Vibrio sp. AND4]
Length = 307
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 157 ISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
+ +Y A LG+ QFNL G+ +EA K A+ G + A++ L +
Sbjct: 50 VGIYYSEAALGNADAQFNLASIYGTGRGVPQDYKEAFKWCCLAAEQGVLAAEFTLGVMYA 109
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G+GV N QE+ +W+ +AAE G A YN + Y+ G G+P S + KW++R+AD
Sbjct: 110 HGQGVKKNYQESIKWFTKAAEKGDAEAQYNLGVAYANGLGVPQSDMEWVKWIRRSAD--Q 167
Query: 269 GKAQLEHGLG-LFTEGEMM 286
G AQ +H LG ++ EG+++
Sbjct: 168 GDAQAQHFLGEMYREGKVV 186
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ GRGV ++ +A A +G A G+MY + +I + +AA
Sbjct: 72 YGTGRGVPQDYKEAFKWCCLAAEQGVLAAEFTLGVMYAHGQGVKKNYQESIKWFTKAAEK 131
Query: 167 GDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q+NLG++Y E VK + +++ G +AQ+ L G+ V + +
Sbjct: 132 GDAEAQYNLGVAYANGLGVPQSDMEWVKWIRRSADQGDAQAQHFLGEMYREGKVVTQSDE 191
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
++ +WY +AAE G +A +N +L Y G S ++A KW AA GH AQ+ +
Sbjct: 192 QSVKWYRKAAEQGVAQAQFNLALMYQDGLVCQRSDKEAMKWYYEAAKQGHAAAQMNLSIC 251
Query: 279 LFTEGEMMKAVVYLELATRAG 299
E + + V++ LA +G
Sbjct: 252 YAEEHDFYSSYVWVLLAKHSG 272
>gi|424845480|ref|ZP_18270091.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
gi|363986918|gb|EHM13748.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
Length = 264
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 168 DPAGQFNL---------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
D A Q+ L G++ + +A K +++ G+ AQ+ LA H G GV +L
Sbjct: 11 DSASQYRLAQAYDEGKDGVAEDKAQAAKWFTKSAEGGYTNAQFSLARMYHTGNGVPVDLA 70
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A +WY +AA+ G A N ++ Y GEG+P+ +A +W +AA G+ AQ H L
Sbjct: 71 KAVKWYTKAAQAGDEVAQNNLAVMYDTGEGVPIDKTKAFEWYTKAAQAGYAPAQ--HNLA 128
Query: 279 LF------TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW--R 330
L + + KA+ + A AGET A + N+ L +S + ++ W +
Sbjct: 129 LMHYSSRSSAADQAKAIEWCTKAAEAGETEAQY--NLALTYVSGEGVPQDVVKAAEWFTK 186
Query: 331 AMPSLH 336
A S H
Sbjct: 187 AAESGH 192
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 106 RWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLY 160
R + + G+ GV ++ +A F K A G T A MY + A+ Y
Sbjct: 17 RLAQAYDEGKDGVAEDKAQAAKWFTKSAEGGYTNAQFSLARMYHTGNGVPVDLAKAVKWY 76
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRG 212
+AA GD Q NL + Y E V + +A+ AG+ AQ+ LAL + R
Sbjct: 77 TKAAQAGDEVAQNNLAVMYDTGEGVPIDKTKAFEWYTKAAQAGYAPAQHNLALMHYSSRS 136
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ +A W +AAE G A YN +L Y GEG+P +A +W +AA+ GH AQ
Sbjct: 137 SAADQAKAIEWCTKAAEAGETEAQYNLALTYVSGEGVPQDVVKAAEWFTKAAESGHADAQ 196
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 319
L L G+ E + ++A + A AG A +++ I+ L ++
Sbjct: 197 LNLALLNWNGVGVERDKVRAYYWACRADLAGADKAVGLRSEIVGSLDKETK 247
>gi|421661397|ref|ZP_16101573.1| Sel1 repeat protein [Acinetobacter baumannii OIFC110]
gi|408715809|gb|EKL60931.1| Sel1 repeat protein [Acinetobacter baumannii OIFC110]
Length = 290
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKE--AAISLYRQAAVLGDPA 170
+ ++ ++ KA++ + A +G A + GL+Y E K + A Y +AA GD A
Sbjct: 78 KDIQADILKAIEWYTLSANQGYVNAQYNLGLLYKGNEYIKPDYVKAKYWYEKAAAQGDIA 137
Query: 171 -----GQF---NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
G F LGI ++A+K A+ AG AQ LA GRGV N EA++
Sbjct: 138 SLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQ 197
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 278
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ AQ G G
Sbjct: 198 WYLKAAVQGDIDAQYNLGLMYFLGDGIKQDYSQAQKWFLAAANQEESNAQYHLGKIYKDG 257
Query: 279 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 315
L + ++ A +L+ + AG + A LQ+LS
Sbjct: 258 LGVDKDLSLARTWLKKSAEAGNSYA-------LQELS 287
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 32/168 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G++++ KA+ +L A G + A + M+ K A Y +A
Sbjct: 143 GNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQWYLKA 202
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
AV GD Q+NLG+ Y G G+ + +A +W
Sbjct: 203 AVQGDIDAQYNLGLMYF----------------------------LGDGIKQDYSQAQKW 234
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+L AA A Y+ Y G G+ AR W+K++A+ G+ A
Sbjct: 235 FLAAANQEESNAQYHLGKIYKDGLGVDKDLSLARTWLKKSAEAGNSYA 282
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 167 GDPAGQFNLGISY------LQEEAVKLLYQASIA---GHVRAQYQLALCLHRGRGVDFNL 217
GD Q+NLG+ Y +Q + +K + +++ G+V AQY L L + +
Sbjct: 61 GDSEAQYNLGVMYAEGYKDIQADILKAIEWYTLSANQGYVNAQYNLGLLYKGNEYIKPDY 120
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE--- 274
+A WY +AA G + ++ YS G G+ +++A K+ AA+ G AQ
Sbjct: 121 VKAKYWYEKAAAQGDIASLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLAT 180
Query: 275 ---HGLGLFTEGEMMKAVVYLELATRA 298
HG G+ T+ ++ + YL+ A +
Sbjct: 181 MFLHGRGV-TQNKLEASQWYLKAAVQG 206
>gi|388456660|ref|ZP_10138955.1| Sel1 repeat protein [Fluoribacter dumoffii Tex-KL]
Length = 378
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 21/222 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----E 154
EAM L+ G+ F++G GV KN +A++ + K A + + LA + G MY ++ K
Sbjct: 49 EAMYLI--GRMFQYGEGVTKNYTEAINWYQKSADKNNPLAQLSLGFMY-DLGKGVKQNFP 105
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALC 206
A Y ++A G+ Q N+G+ Y+ + VK +++ G+ +AQ LA
Sbjct: 106 EAFKWYMKSAKQGNAIAQRNIGLMYVAGDGVKENKKTAFEWFEKSAKQGYSKAQVNLAYD 165
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAAD 265
G G ++ +A WY +AA+ G VRA Y+ L Y+ + G+ + A W +AA+
Sbjct: 166 YIMGEGTSKDVNQALYWYQKAADQGDVRAQYSLGLLYTGQQPGVAQDDKLAFYWFSQAAN 225
Query: 266 CGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
GH KA+ G E KA + + A +G++ A
Sbjct: 226 QGHVKAETYLAYYYLKGYGVEANPEKAAYWYQAAALSGQSEA 267
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 25/217 (11%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K++ +A+ +++ + L G + G+GV++N +A ++K A +G+ +A
Sbjct: 64 VTKNYTEAINWYQKSADKNNPLAQLSLGFMYDLGKGVKQNFPEAFKWYMKSAKQGNAIAQ 123
Query: 141 VDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-----KLLY-- 189
+ GLMY D K+ A + ++A G Q NL Y+ E + LY
Sbjct: 124 RNIGLMYVAGDGVKENKKTAFEWFEKSAKQGYSKAQVNLAYDYIMGEGTSKDVNQALYWY 183
Query: 190 -QASIAGHVRAQYQLALCLHRGR--GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF- 245
+A+ G VRAQY L L L+ G+ GV + + A W+ +AA G+V+A T L Y +
Sbjct: 184 QKAADQGDVRAQYSLGL-LYTGQQPGVAQDDKLAFYWFSQAANQGHVKA--ETYLAYYYL 240
Query: 246 -GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
G G+ + +A W + AA G +AQ E G L T
Sbjct: 241 KGYGVEANPEKAAYWYQAAALSGQSEAQAEIGQLLLT 277
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q+ G++ EA+ +++ + AQ L G+GV N EA +WY+++A+ G
Sbjct: 59 QYGEGVTKNYTEAINWYQKSADKNNPLAQLSLGFMYDLGKGVKQNFPEAFKWYMKSAKQG 118
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----EHGLGLFTEGEMMK 287
A N L Y G+G+ + + A +W +++A G+ KAQ+ ++ +G T ++ +
Sbjct: 119 NAIAQRNIGLMYVAGDGVKENKKTAFEWFEKSAKQGYSKAQVNLAYDYIMGEGTSKDVNQ 178
Query: 288 AVVYLELATRAGETAADH 305
A+ + + A G+ A +
Sbjct: 179 ALYWYQKAADQGDVRAQY 196
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ A Y + G GV N EA WY ++A+ A + Y G+G+ +
Sbjct: 46 GNPEAMYLIGRMFQYGEGVTKNYTEAINWYQKSADKNNPLAQLSLGFMYDLGKGVKQNFP 105
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
+A KW ++A G+ AQ GL ++ G+ +K
Sbjct: 106 EAFKWYMKSAKQGNAIAQRNIGL-MYVAGDGVK 137
>gi|354594571|ref|ZP_09012610.1| hypothetical protein CIN_13060 [Commensalibacter intestini A911]
gi|353672247|gb|EHD13947.1| hypothetical protein CIN_13060 [Commensalibacter intestini A911]
Length = 256
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 54/238 (22%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV+KN+ KA++ K A G+ A G++Y E + E A Y++AA
Sbjct: 3 YSTGLGVQKNMQKAVEYLTKAAEHGNADAQFKLGVLYDEGNVFPQNSEKAFEYYKKAADQ 62
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q+NLG Y E+A +L +A+ G AQY LA+ G+GV+ + Q
Sbjct: 63 GSIEAQYNLGWMYANGQGTTKDYEKAYELFQKAADEGLPAAQYSLAIMYWHGQGVEQDRQ 122
Query: 219 EAARWYLRAAEGGY------------------------------------VRAMYNTSLC 242
++ +Y +AA GY A +N ++
Sbjct: 123 KSIEYYEKAAAQGYPEAEANLGYFYKNGNEVTKDSFKAVELLQKAAAQGVPEAQFNLAMM 182
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELA 295
Y GEG+P + AR+W+++AAD G A+L G+ L+ G + +KA Y + A
Sbjct: 183 YLDGEGIPQDYVAAREWLEKAADQGDKSAELNLGV-LYGNGQGVTKDYVKAKAYFKQA 239
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 175 LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
LG+ ++AV+ L +A+ G+ AQ++L + G N ++A +Y +AA+ G +
Sbjct: 7 LGVQKNMQKAVEYLTKAAEHGNADAQFKLGVLYDEGNVFPQNSEKAFEYYKKAADQGSIE 66
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKA 288
A YN Y+ G+G + +A + ++AAD G AQ HG G+ E + K+
Sbjct: 67 AQYNLGWMYANGQGTTKDYEKAYELFQKAADEGLPAAQYSLAIMYWHGQGV--EQDRQKS 124
Query: 289 VVYLELATRAGETAAD 304
+ Y E A G A+
Sbjct: 125 IEYYEKAAAQGYPEAE 140
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
G GV N+Q+A + +AAE G A + + Y G P + +A ++ K+AAD G
Sbjct: 6 GLGVQKNMQKAVEYLTKAAEHGNADAQFKLGVLYDEGNVFPQNSEKAFEYYKKAADQGSI 65
Query: 270 KAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
+AQ G G T + KA + A G AA + ++ +DR
Sbjct: 66 EAQYNLGWMYANGQGTTKDYEKAYELFQKAADEGLPAAQYSLAIMYWHGQGVEQDR 121
>gi|239503112|ref|ZP_04662422.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AB900]
gi|421679060|ref|ZP_16118940.1| Sel1 repeat protein [Acinetobacter baumannii OIFC111]
gi|410391751|gb|EKP44117.1| Sel1 repeat protein [Acinetobacter baumannii OIFC111]
Length = 230
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDP 169
+GV KN ++A GS A G+MY+ E D K A + +AA G
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRA-FEYFAKAADKGHA 112
Query: 170 AGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NLG+ Y + E+A + +A+ G+ A+Y LA +G GV + ++A
Sbjct: 113 KAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVSQSNEQAL 172
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+WY +AAE A YN + Y GEG P + + A+KW ++AAD G A+
Sbjct: 173 KWYTKAAEHNESDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAGDSDAK 223
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 167 GDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G P Q++LGI L E+A K L A G V A+Y L + G GV+ ++
Sbjct: 37 GQPIAQYHLGIMLLTGEQGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDM 96
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ A ++ +AA+ G+ +A YN + Y GEG ++ QA +W RAA+ G+ A+
Sbjct: 97 KRAFEYFAKAADKGHAKAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAE 151
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGG 231
F+L S E +V + + G AQY L + L G +GV N ++A +W A + G
Sbjct: 15 FSLHSSAFAEPSVADVQYRAQQGQPIAQYHLGIMLLTGEQGVVKNYEQAFKWLTAADQNG 74
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
V A Y+ + Y G G+ ++A ++ +AAD GH KAQ G+ L+ GE
Sbjct: 75 SVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGV-LYDRGE 126
>gi|78189891|ref|YP_380229.1| Sel1 repeat-containing protein [Chlorobium chlorochromatii CaD3]
gi|78172090|gb|ABB29186.1| Sel1-like repeat [Chlorobium chlorochromatii CaD3]
Length = 425
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISL 159
L G + HG GV+++ +A+ + AA+G A + G+MY+ + D E AI
Sbjct: 49 LNLGYAYDHGEGVKQDYAEAIKWYRLSAAQGDVKAQFNLGVMYYNGEGVKQDYAE-AIKW 107
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLY-------QASIA-GHVRAQYQLALCLHRGR 211
+R A GD QFNLG+ Y E VK Y Q S A G+ AQ L + +G
Sbjct: 108 FRLLATQGDAIAQFNLGVMYYNGEGVKQDYTDALKWFQLSAAQGNAMAQNNLGVMYAKGE 167
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV + EA +W+ +A G A N Y GEG+ + +A KW + +A G A
Sbjct: 168 GVQQDYAEALKWHRLSAAQGNAMAQNNLGAMYYKGEGVEQDYVEALKWYRLSAAQGDAVA 227
Query: 272 QLEHGLGLFTEGE 284
Q GL ++ EG+
Sbjct: 228 QWILGL-MYYEGQ 239
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--- 147
W L +A+ G + +G GV+++ AL F AA+G+ +A + G+MY
Sbjct: 107 WFRLLATQGDAIAQFNLGVMYYNGEGVKQDYTDALKWFQLSAAQGNAMAQNNLGVMYAKG 166
Query: 148 --WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHV 197
+ D EA + +R +A G+ Q NLG Y + E V+ Y ++ G
Sbjct: 167 EGVQQDYAEA-LKWHRLSAAQGNAMAQNNLGAMYYKGEGVEQDYVEALKWYRLSAAQGDA 225
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQ+ L L + G+GV + EA +WY +A +A YN L Y GEG+ + +A
Sbjct: 226 VAQWILGLMYYEGQGVRQDYGEAIKWYRLSAAQEDAKAQYNLGLMYYNGEGVKQDYAEAL 285
Query: 258 KWMKRAADCGHGKAQLEHGLGLFTEGE 284
KW + +A G+ AQ G ++ +GE
Sbjct: 286 KWHRLSAAQGNAMAQNNLG-AMYAKGE 311
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQAAVLGDPAGQFNL 175
K + + + AA+G++ A ++ G Y D E AI YR +A GD QFNL
Sbjct: 31 KQISQWQQAAAQGNSEAQLNLGYAY---DHGEGVKQDYAEAIKWYRLSAAQGDVKAQFNL 87
Query: 176 GISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ Y E VK Y +I G AQ+ L + + G GV + +A +W+ +
Sbjct: 88 GVMYYNGEGVKQDYAEAIKWFRLLATQGDAIAQFNLGVMYYNGEGVKQDYTDALKWFQLS 147
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEG 283
A G A N + Y+ GEG+ + +A KW + +A G+ AQ G G E
Sbjct: 148 AAQGNAMAQNNLGVMYAKGEGVQQDYAEALKWHRLSAAQGNAMAQNNLGAMYYKGEGVEQ 207
Query: 284 EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ ++A+ + L+ G+ A + ++ + +D
Sbjct: 208 DYVEALKWYRLSAAQGDAVAQWILGLMYYEGQGVRQD 244
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA 155
AM G + G GV ++ +AL + AA+G +A GLMY+E D EA
Sbjct: 189 AMAQNNLGAMYYKGEGVEQDYVEALKWYRLSAAQGDAVAQWILGLMYYEGQGVRQDYGEA 248
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCL 207
I YR +A D Q+NLG+ Y E VK Y ++ G+ AQ L
Sbjct: 249 -IKWYRLSAAQEDAKAQYNLGLMYYNGEGVKQDYAEALKWHRLSAAQGNAMAQNNLGAMY 307
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G GV + EA +W+ +A G A L Y G G+ ++ +A KW + +A G
Sbjct: 308 AKGEGVQQDYAEALKWHRLSAAQGDATAQGILGLMYCEGYGVRQNYGEALKWYRLSAAQG 367
Query: 268 HGKAQLEHGLGLFT 281
+ AQ GL +
Sbjct: 368 NAGAQYNLGLMYYN 381
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISL--YRQA 163
G + G+GVR++ +A+ + AA+ A + GLMY+ E K++ A +L +R +
Sbjct: 232 GLMYYEGQGVRQDYGEAIKWYRLSAAQEDAKAQYNLGLMYYNGEGVKQDYAEALKWHRLS 291
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A G+ Q NLG Y + E V+ Y ++ G AQ L L G GV
Sbjct: 292 AAQGNAMAQNNLGAMYAKGEGVQQDYAEALKWHRLSAAQGDATAQGILGLMYCEGYGVRQ 351
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N EA +WY +A G A YN L Y G G+ S A++W +A D G
Sbjct: 352 NYGEALKWYRLSAAQGNAGAQYNLGLMYYNGTGVRQSKAIAKEWFGKACDNG 403
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV+++ +AL AA+G+ +A + G MY + D EA + +R
Sbjct: 268 GLMYYNGEGVKQDYAEALKWHRLSAAQGNAMAQNNLGAMYAKGEGVQQDYAEA-LKWHRL 326
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A GD Q LG+ Y + EA+K ++ G+ AQY L L + G GV
Sbjct: 327 SAAQGDATAQGILGLMYCEGYGVRQNYGEALKWYRLSAAQGNAGAQYNLGLMYYNGTGVR 386
Query: 215 FNLQEAARWYLRAAEGGY 232
+ A W+ +A + G+
Sbjct: 387 QSKAIAKEWFGKACDNGF 404
>gi|189500441|ref|YP_001959911.1| Sel1 domain-containing protein repeat-containing protein
[Chlorobium phaeobacteroides BS1]
gi|189495882|gb|ACE04430.1| Sel1 domain protein repeat-containing protein [Chlorobium
phaeobacteroides BS1]
Length = 528
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ + G+GV +N +A F A +G A + GL+Y+ + D EAA +
Sbjct: 86 GQLYATGKGVTQNHTEAAKWFRMAAEQGHAKAQSNLGLIYFSNQGVQQDYVEAA-KWFGM 144
Query: 163 AAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G QF LG Y E V +L A+ +AQ+ L + G+GV+
Sbjct: 145 AADQGHTRAQFFLGRMYYSGEGVTKNHKTAARLFQLAAKNNDAKAQHNLGVMYAEGQGVE 204
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N EAARWY ++AE G A ++ + +S G G+ ++ +A KW+ A++ GH +AQL+
Sbjct: 205 QNYTEAARWYRKSAEQGDPDAAFHLGMLFSGGRGVAQNNAEAFKWLHIASEKGHTQAQLQ 264
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A G+ Q LG Y + V+ Y ++ G++ AQ L G+GV
Sbjct: 38 ASQGNEEHQLKLGFIYANGDGVEQNYTKAVKWYRVAADQGNMIAQNNLGQLYATGKGVTQ 97
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N EAA+W+ AAE G+ +A N L Y +G+ + +A KW AAD GH +AQ
Sbjct: 98 NHTEAAKWFRMAAEQGHAKAQSNLGLIYFSNQGVQQDYVEAAKWFGMAADQGHTRAQFFL 157
Query: 276 GLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVI 310
G ++ GE + A +LA + + A H V+
Sbjct: 158 GR-MYYSGEGVTKNHKTAARLFQLAAKNNDAKAQHNLGVM 196
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
A+ G RAQYQL GRGVD N+++AA WY +AAE G A
Sbjct: 469 AAEKGLPRAQYQLGNIFAEGRGVDKNVEKAAEWYRKAAEQGLEEA 513
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G A +LA L GRG + N EA WY +AAE A + + G G
Sbjct: 361 AAQEGDSEAALKLADMLSEGRGGEQNDAEARSWYQKAAEMETGEAAFKLAGMIIEGRGGK 420
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGL 277
S+ R W K+AA + +A L+ G
Sbjct: 421 QSNSDGRSWYKKAAAMEYSEAALQLGF 447
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
A ++LA + GRG + + WY +AA Y A Y G+ P ++ AR
Sbjct: 404 EAAFKLAGMIIEGRGGKQSNSDGRSWYKKAAAMEYSEAALQLGFMYQAGKNAPRNNWLAR 463
Query: 258 KWMKRAADCGHGKAQLEHGLGLFTEG 283
+W AA+ G +AQ + G +F EG
Sbjct: 464 QWFLVAAEKGLPRAQYQLG-NIFAEG 488
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ A QL G+ N A +W+L AAE G RA Y ++ G G+ + +
Sbjct: 438 YSEAALQLGFMYQAGKNAPRNNWLARQWFLVAAEKGLPRAQYQLGNIFAEGRGVDKNVEK 497
Query: 256 ARKWMKRAADCG 267
A +W ++AA+ G
Sbjct: 498 AAEWYRKAAEQG 509
>gi|260753434|ref|YP_003226327.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552797|gb|ACV75743.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 334
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 22/224 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
+A L G + +G + DK++D + + A +G+ A ++ GLM+ D K
Sbjct: 107 DADAALALGNMYYNGDSIAP--DKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDKAK 164
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKL-------LYQ-ASIAGHVRAQYQLALCL 207
A+ Y+QAA G+P + LG Y EAV L YQ A+ G+ A+ L L
Sbjct: 165 ALYWYQQAADKGNPQAELILGNMYYNGEAVPLDKTKAFEWYQKAANQGNAAAELNLGLMY 224
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV + ++ WY +AAE G +A Y+ Y G+G+ + +A W ++AA+
Sbjct: 225 AHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGVAVDKAKALSWYQQAAN-- 282
Query: 268 HGKAQLEHGLGL-FTEGEMM-----KAVVYLELATRAGETAADH 305
HG AQ E LG+ F GE + A +L+ A G A +
Sbjct: 283 HGLAQAELALGIMFYNGEGVTVDKNNAAYWLKQAANHGNDTAKY 326
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 18/242 (7%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAV 165
++ HG + KAL + A +G A G Y++ + K A+ Y+QA
Sbjct: 45 KYAHGDSSNIDKSKALTLIQQAANKGFAPAEYALGTFYYKGEAVAADKSKALYWYQQAVT 104
Query: 166 LGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
GD LG Y +++V L QA+ G+ +AQ L L RG V + +
Sbjct: 105 HGDADAALALGNMYYNGDSIAPDKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDKAK 164
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A WY +AA+ G +A Y GE +PL +A +W ++AA+ G+ A+L GL +
Sbjct: 165 ALYWYQQAADKGNPQAELILGNMYYNGEAVPLDKTKAFEWYQKAANQGNAAAELNLGL-M 223
Query: 280 FTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334
+ G+ + K++ + + A G+ A++ + + D+A + SW +
Sbjct: 224 YAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGVAVDKAKAL--SWYQQAA 281
Query: 335 LH 336
H
Sbjct: 282 NH 283
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
A L G F G V + KAL + + A +G+ A + G MY+ + K
Sbjct: 141 NAQAQLNLGLMFSRGDAVSLDKAKALYWYQQAADKGNPQAELILGNMYYNGEAVPLDKTK 200
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKL-------LYQ-ASIAGHVRAQYQLALCL 207
A Y++AA G+ A + NLG+ Y + V L YQ A+ G +A+Y L
Sbjct: 201 AFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMY 260
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ G GV + +A WY +AA G +A + + GEG+ + A W+K+AA+ G
Sbjct: 261 YNGDGVAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTVDKNNAAYWLKQAANHG 320
Query: 268 HGKAQLE 274
+ A+ +
Sbjct: 321 NDTAKYQ 327
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G V + KA + + K A +G+ A ++ GLMY D K ++S Y++A
Sbjct: 185 GNMYYNGEAVPLDKTKAFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKA 244
Query: 164 AVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD +++LG Y + V + QA+ G +A+ L + + G GV
Sbjct: 245 AEQGDAQAEYSLGNMYYNGDGVAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTV 304
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+ AA W +AA G A Y L ++
Sbjct: 305 DKNNAAYWLKQAANHGNDTAKYQLKLWFN 333
>gi|189502471|ref|YP_001958188.1| hypothetical protein Aasi_1118 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497912|gb|ACE06459.1| hypothetical protein Aasi_1118 [Candidatus Amoebophilus asiaticus
5a2]
Length = 329
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 29/220 (13%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPA 170
+G K+ +A D + K A RGS++A + A S+Y +A + D
Sbjct: 83 NGMITEKDEQEARDWYEKAAERGSSVA-------------RNALCSMYEKAVRVRQEDME 129
Query: 171 GQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q+NLG+ Y + +EA + +A+ G+ +AQ+ LA G GV+ + +A +
Sbjct: 130 AQYNLGVMYYKCWGVDKNYQEAKEWYEKAAEQGYAKAQHTLAAMYINGEGVEKDHVKAFK 189
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
W +AA+ GY RA +N + Y GEG+ H +A KW ++AA G+ KAQ ++ ++
Sbjct: 190 WCQKAAKQGYARAQHNLAAMYINGEGVEKDHAKAFKWCQKAAKQGYAKAQ-DNLAAMYIN 248
Query: 283 GEMM-----KAVVYLELATRAGETAADHVKNVILQQLSAT 317
GE + KA + + A G +A + + Q+++ T
Sbjct: 249 GEGVEKDHAKAFKWCQKAAEQGNVSAQYNRAAAKQKINKT 288
>gi|424737685|ref|ZP_18166135.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZB2]
gi|422948324|gb|EKU42707.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZB2]
Length = 638
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 32/200 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G+ +N ++A + A +G+T A + G +Y + A++ ++ A
Sbjct: 257 GVLYNQGLGLSQNFNEAAKWYTLAANQGNTSAQNNLGFLYHNGTGVEQNYDKAVAYFKMA 316
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
A+ GD + Q+NLG +L +GRG+ N +EAA+W
Sbjct: 317 ALTGDASAQYNLGYMHL----------------------------KGRGIPQNQEEAAKW 348
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
+ AA +V A + ++ Y+ G+G+ H +A KW K AA GH AQ GL E
Sbjct: 349 FHMAALQDHVNAEFQLAMLYNTGQGMTKDHIEALKWFKLAAHKGHLNAQYCLGLLYEKEQ 408
Query: 284 EMMKAVVYLELATRAGETAA 303
++ A +L LA G +A
Sbjct: 409 NLVSAEKWLLLAADNGHISA 428
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 89/179 (49%), Gaps = 19/179 (10%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKEAAISLYRQAAVLGDPAGQFNLG 176
+NL A L A G A + G +Y ++++ A+S +R AA G Q+ LG
Sbjct: 407 EQNLVSAEKWLLLAADNGHISAGFELGRLYAYQLEDPVKAMSYFRTAAEKGYADAQYELG 466
Query: 177 ----------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
I+Y +EAVK A+ H++A+YQL L +G GV NL+EA R Y
Sbjct: 467 LLLTSGTGVPINY--KEAVKWWRAATDQSHIQAEYQLGLLYEQGLGVALNLEEARRCYRL 524
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGL 279
AA G+ A Y + G+G+ + +A KW+++AA GH KAQ + HG G+
Sbjct: 525 AATQGHAGAQYQLGNLFDKGKGVEQDYTEAAKWIEQAASQGHMKAQYQLAQMHIHGQGV 583
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-------KLLYQ-ASIAGHVRAQYQLAL 205
E A+ + AA GD + Q+NLG Y V K+ Y+ A+ A Y L +
Sbjct: 163 EHAVKWFEVAAQNGDASAQYNLGALYNHGRGVEKDYRLAKMWYERAAAQNDANAHYSLGV 222
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
H G+GV + EAAR Y AA+ A YN + Y+ G GL + +A KW AA+
Sbjct: 223 LYHLGQGVIQDYLEAARHYQIAADLENADAQYNLGVLYNQGLGLSQNFNEAAKWYTLAAN 282
Query: 266 CGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 305
G+ AQ G G E KAV Y ++A G+ +A +
Sbjct: 283 QGNTSAQNNLGFLYHNGTGVEQNYDKAVAYFKMAALTGDASAQY 326
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G GV N +A+ + + A GL+Y + E A YR AA G
Sbjct: 472 GTGVPINYKEAVKWWRAATDQSHIQAEYQLGLLYEQGLGVALNLEEARRCYRLAATQGHA 531
Query: 170 AGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+ LG + EA K + QA+ GH++AQYQLA G+GV + +AA
Sbjct: 532 GAQYQLGNLFDKGKGVEQDYTEAAKWIEQAASQGHMKAQYQLAQMHIHGQGVPKDFAKAA 591
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
+ Y +A G+ +A + + Y G G+ +++A +W+K++
Sbjct: 592 QLYRLSANQGHQKAQFQLGMLYKKGHGVAQDYQEATRWLKKS 633
>gi|445496963|ref|ZP_21463818.1| Sel1 domain protein repeat-containing protein [Janthinobacterium
sp. HH01]
gi|444786958|gb|ELX08506.1| Sel1 domain protein repeat-containing protein [Janthinobacterium
sp. HH01]
Length = 461
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 98/232 (42%), Gaps = 54/232 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G+ + HGRGVR+N AL F K A + A ++ GLMY + + +A A++ YRQA
Sbjct: 141 GEAYVHGRGVRRNYPLALAWFRKAALQNDASAQLNLGLMYRNGHGVARNDAQALAWYRQA 200
Query: 164 AVLG------------------------------------DPAGQFNLGISYLQ------ 181
A G D QFNLGI
Sbjct: 201 AAQGCAVAQRMVGVAYAEGLGVAPDLLRAYAWLLRAAEQEDADAQFNLGIMLANGKGVDR 260
Query: 182 --EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
E A +A+ +GH AQY L RGRGV + Q A WY AAE G A +N
Sbjct: 261 DDELAFTWYRRAAESGHALAQYNLGGMYARGRGVQRDEQRALEWYRMAAEQGAPNAQFNV 320
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEM 285
+ Y+ G+G+ +A W + AA+ G AQ HGLG+ + E+
Sbjct: 321 GVMYANGQGVAKDEARAVAWYRCAAEQGDASAQNNLGVMYAHGLGVACDEEV 372
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 101/242 (41%), Gaps = 16/242 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+K G+ V ++ +A LK A +G A G+MY+ + A+ +R AA+
Sbjct: 36 YKKGQDVARDDTRAFYWMLKAAQQGLAFAQNHLGVMYYNGRGVASNDKEAVRWFRAAALQ 95
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ + Q NLG Y + E A+ Y+AS G AQ L GRGV N
Sbjct: 96 GEVSAQQNLGQMYKKGRGVARNDETALSWFYRASEQGVASAQTLLGEAYVHGRGVRRNYP 155
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LE 274
A W+ +AA A N L Y G G+ + QA W ++AA G AQ +
Sbjct: 156 LALAWFRKAALQNDASAQLNLGLMYRNGHGVARNDAQALAWYRQAAAQGCAVAQRMVGVA 215
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334
+ GL ++++A +L A + A ++L RD + RA S
Sbjct: 216 YAEGLGVAPDLLRAYAWLLRAAEQEDADAQFNLGIMLANGKGVDRDDELAFTWYRRAAES 275
Query: 335 LH 336
H
Sbjct: 276 GH 277
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGR 211
YR+AA GDP QFNLG+ Y + + V + +A+ G AQ L + + GR
Sbjct: 17 YREAAERGDPYAQFNLGLVYKKGQDVARDDTRAFYWMLKAAQQGLAFAQNHLGVMYYNGR 76
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV N +EA RW+ AA G V A N Y G G+ + A W RA++ G A
Sbjct: 77 GVASNDKEAVRWFRAAALQGEVSAQQNLGQMYKKGRGVARNDETALSWFYRASEQGVASA 136
Query: 272 Q 272
Q
Sbjct: 137 Q 137
>gi|349610784|ref|ZP_08890111.1| hypothetical protein HMPREF1028_02086 [Neisseria sp. GT4A_CT1]
gi|348615783|gb|EGY65293.1| hypothetical protein HMPREF1028_02086 [Neisseria sp. GT4A_CT1]
Length = 305
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 22/184 (11%)
Query: 132 AARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK 186
A +G+ + + GLMY+ D K+A +R+AA GD Q NLG Y Q + V
Sbjct: 34 AKQGNAASQFNLGLMYYSGKGAPKDYKQAE-HWFRRAAEQGDVDAQTNLGGLYYQGKGVV 92
Query: 187 LLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
Y+ A+ G +AQY L L G+G++ + +AA+WY +AA+ GY+ A Y+
Sbjct: 93 QDYKKAKYWFQKAAAQGFAKAQYDLGLIYFLGKGIEQDYGQAAQWYEKAAKQGYLDAQYD 152
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYL 292
++ Y G G+ + +A +W ++AA+ G +AQ HGLG+ + + +AV++L
Sbjct: 153 LAIMYDNGLGVGKAPEKAFQWYRKAAEQGDNQAQYTVATRYMHGLGV--QKDFKQAVLWL 210
Query: 293 ELAT 296
A
Sbjct: 211 HRAA 214
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 30/272 (11%)
Query: 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSF 128
L +A + +P L K N A + G + G+G K+ +A F
Sbjct: 15 LGHMANASNIPNFAETELEAKQGNAASQ--------FNLGLMYYSGKGAPKDYKQAEHWF 66
Query: 129 LKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE 183
+ A +G A + G +Y++ D K+A +++AA G Q++LG+ Y +
Sbjct: 67 RRAAEQGDVDAQTNLGGLYYQGKGVVQDYKKAKY-WFQKAAAQGFAKAQYDLGLIYFLGK 125
Query: 184 AVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
++ Y +A+ G++ AQY LA+ G GV ++A +WY +AAE G +A
Sbjct: 126 GIEQDYGQAAQWYEKAAKQGYLDAQYDLAIMYDNGLGVGKAPEKAFQWYRKAAEQGDNQA 185
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAV 289
Y + Y G G+ +QA W+ RAAD + KAQL+ HG G+ + + +A+
Sbjct: 186 QYTVATRYMHGLGVQKDFKQAVLWLHRAADQENIKAQLDLGVAYSHGFGVRQDDK--QAL 243
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDR 321
+ A G A + ++ ++ S++R
Sbjct: 244 YWYRKAAEQGIGEAQYNLGLMYEEGQGVSKNR 275
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-------KEAAISLYRQAAVL 166
G+G+ ++ +A + K A +G A D +MY D E A YR+AA
Sbjct: 124 GKGIEQDYGQAAQWYEKAAKQGYLDAQYDLAIMY---DNGLGVGKAPEKAFQWYRKAAEQ 180
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q+ + Y+ ++AV L++A+ +++AQ L + G GV + +
Sbjct: 181 GDNQAQYTVATRYMHGLGVQKDFKQAVLWLHRAADQENIKAQLDLGVAYSHGFGVRQDDK 240
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+A WY +AAE G A YN L Y G+G+ + + A++W K+A D G
Sbjct: 241 QALYWYRKAAEQGIGEAQYNLGLMYEEGQGVSKNRKVAKEWYKKACDNG 289
>gi|338740756|ref|YP_004677718.1| hypothetical protein HYPMC_3943 [Hyphomicrobium sp. MC1]
gi|337761319|emb|CCB67152.1| conserved protein of unknown function, Sel1-like protein
[Hyphomicrobium sp. MC1]
Length = 232
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 135 GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVK 186
GS LA A +E + + A +L+ A G+ + + Y+ E AV+
Sbjct: 11 GSPLASAVAA---YEKEDYQEAFALFMDLAEQGNSDAKAWIAAMYVNGEGVTASLPTAVE 67
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
+++ AG+V AQ L L G+G + RW +AAE G + A YN + YS G
Sbjct: 68 YYRESAEAGNVLAQTNLGAMLAMGQGTARDEAAGVRWLTKAAEKGDIFAQYNLATLYSKG 127
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETA 302
+G+P H A KW + AA+ GH +Q G G+ + ++A V+L LA + G
Sbjct: 128 DGIPADHALAAKWYRAAAEAGHYPSQARLGFFYANGVGVTKDRVEAYVWLSLAAQHGVGT 187
Query: 303 ADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334
A + ++ Q+S + + + +V++WR+ S
Sbjct: 188 ALNSLEALVGQMSTEEKRQGLALVEAWRSRTS 219
>gi|338814246|ref|ZP_08626276.1| hypothetical protein ALO_18502 [Acetonema longum DSM 6540]
gi|337273767|gb|EGO62374.1| hypothetical protein ALO_18502 [Acetonema longum DSM 6540]
Length = 707
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 10/185 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + HG GV ++ +A+ + K A +G A L Y + E A+ R+A
Sbjct: 235 GGAYAHGYGVPRDPAEAVKYWRKAAEQGYVPAQYMLALSYADGYGGNKDPEEALLWCRKA 294
Query: 164 AVLGDPAGQFNLGISYLQE-----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
A G QF LG +Y E VK +A+ AG +QY+L + G+G+ +
Sbjct: 295 ADQGHIQAQFLLGRAYFYSKKEYAEGVKWWQRAASAGEKESQYELGIAYQLGKGIAQDDV 354
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
E+ +W+ +AAE G+ A + Y +G+G+P + QA W+K++AD G+G AQ+ G+
Sbjct: 355 ESVKWFQKAAEQGHPDAQHMLGRAYYYGKGVPKDYSQAAHWLKQSADQGNGWAQVTLGV- 413
Query: 279 LFTEG 283
L+ G
Sbjct: 414 LYRNG 418
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG---STLAMVDAGLMYWEMDKKEA-AISLYRQA 163
G ++ G+ V+K++ +A+ + K A +G + + +A + + MD+ A +R++
Sbjct: 55 GSMYEEGKEVKKDIVEAVKWWRKAAEQGHMDAQYVLGNAAIFGYGMDRNPVEAAKWWRKS 114
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G +GQ+ +G +Y+ EAV+ +A+ GH AQY L + + G GV+
Sbjct: 115 AEQGHISGQYTIGNAYMYGEGVKKDPTEAVRWWKEAAAQGHGGAQYVLGMAYNDGIGVEQ 174
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA RW+ +A E Y A Y L Y+ G G+ H A K ++ A+ H ++Q
Sbjct: 175 DFTEAVRWWQKAVEQNYAPAHYPLGLAYAEGHGVKKDHDAALKHWQQGAEKEHARSQFAL 234
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHV 306
G G + G + +AV Y A G A ++
Sbjct: 235 G-GAYAHGYGVPRDPAEAVKYWRKAAEQGYVPAQYM 269
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 161 RQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+ A GD Q+ LG Y + EAVK +A+ GH+ AQY L G G
Sbjct: 40 RKTAEQGDAQSQYQLGSMYEEGKEVKKDIVEAVKWWRKAAEQGHMDAQYVLGNAAIFGYG 99
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+D N EAA+W+ ++AE G++ Y Y +GEG+ +A +W K AA GHG AQ
Sbjct: 100 MDRNPVEAAKWWRKSAEQGHISGQYTIGNAYMYGEGVKKDPTEAVRWWKEAAAQGHGGAQ 159
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATR 297
G+ G+ E + +AV + + A
Sbjct: 160 YVLGMAYNDGIGVEQDFTEAVRWWQKAVE 188
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 88/209 (42%), Gaps = 29/209 (13%)
Query: 85 SLVCKSWNDALRPLR-EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDA 143
S K W A + +A LL G + G GV +N AL+ F K A +G A V
Sbjct: 426 SEAVKLWEQAAKQNHVQAQYLL--GLSYFDGTGVVRNYATALEWFKKAADQGYLEAQVQL 483
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQL 203
G MY + LG + EA+K +A+ H +QY L
Sbjct: 484 GYMY------------------------ERGLGATSNLAEAMKWYQKAAEQQHSWSQYYL 519
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
C G+GV+ N +A WY +AA GY A Y G G+P ++ +A KW ++A
Sbjct: 520 GTCYETGKGVEKNYAKAFEWYQKAAASGYSSAFAKMGNVYYSGYGVPKNYDEAMKWYQKA 579
Query: 264 ADCGH--GKAQLEHGLGLFTEGEMMKAVV 290
+ G G+ GL FT + K+ V
Sbjct: 580 VEKGDPTGEGHYYLGLAYFTGNGVKKSPV 608
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV+K+ +A+ + + AA+G A G+ Y E D EA + +++
Sbjct: 127 GNAYMYGEGVKKDPTEAVRWWKEAAAQGHGGAQYVLGMAYNDGIGVEQDFTEA-VRWWQK 185
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASIAG--------HVRAQYQLALCLHRGRGVD 214
A + LG++Y + VK + A++ H R+Q+ L G GV
Sbjct: 186 AVEQNYAPAHYPLGLAYAEGHGVKKDHDAALKHWQQGAEKEHARSQFALGGAYAHGYGVP 245
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA +++ +AAE GYV A Y +L Y+ G G +A W ++AAD GH +AQ
Sbjct: 246 RDPAEAVKYWRKAAEQGYVPAQYMLALSYADGYGGNKDPEEALLWCRKAADQGHIQAQFL 305
Query: 275 HGLGLF-TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G F ++ E + V + + A AGE + + + Q ++D
Sbjct: 306 LGRAYFYSKKEYAEGVKWWQRAASAGEKESQYELGIAYQLGKGIAQD 352
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV KN KA + + K AA G + A G +Y+ + A+ Y++A
Sbjct: 520 GTCYETGKGVEKNYAKAFEWYQKAAASGYSSAFAKMGNVYYSGYGVPKNYDEAMKWYQKA 579
Query: 164 AVLGDPAGQ--FNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
GDP G+ + LG++Y EA K AS GH AQY L++ V
Sbjct: 580 VEKGDPTGEGHYYLGLAYFTGNGVKKSPVEAAKRWTIASERGHALAQYALSVSYSNNAPV 639
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N A +W AAE G V A Y + Y G + QA W ++AA+ GH A+
Sbjct: 640 LENYLGAVKWRKEAAEKGDVNAQYYLATSYMLGFDQEKNINQATVWFQKAAEQGHSGAK 698
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-AISLYRQAAVLGDP 169
+ G G K+ ++AL K A +G A G Y+ K+ A + +++AA G+
Sbjct: 274 YADGYGGNKDPEEALLWCRKAADQGHIQAQFLLGRAYFYSKKEYAEGVKWWQRAASAGEK 333
Query: 170 AGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+ LGI+Y E+VK +A+ GH AQ+ L + G+GV + +AA
Sbjct: 334 ESQYELGIAYQLGKGIAQDDVESVKWFQKAAEQGHPDAQHMLGRAYYYGKGVPKDYSQAA 393
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
W ++A+ G A + Y G G+ + +A K ++AA H +AQ GL F
Sbjct: 394 HWLKQSADQGNGWAQVTLGVLYRNGYGVANNDSEAVKLWEQAAKQNHVQAQYLLGLSYF 452
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
+ L + + + V L + + G ++QYQL G+ V ++ EA +W+ +AAE G+
Sbjct: 24 YGLSVRDVSAQPVAGLRKTAEQGDAQSQYQLGSMYEEGKEVKKDIVEAVKWWRKAAEQGH 83
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG---EMMKA 288
+ A Y FG G+ + +A KW +++A+ GH Q G ++ EG + +A
Sbjct: 84 MDAQYVLGNAAIFGYGMDRNPVEAAKWWRKSAEQGHISGQYTIGNAYMYGEGVKKDPTEA 143
Query: 289 VVYLELATRAGETAADHV 306
V + + A G A +V
Sbjct: 144 VRWWKEAAAQGHGGAQYV 161
>gi|384483828|gb|EIE76008.1| hypothetical protein RO3G_00712 [Rhizopus delemar RA 99-880]
Length = 610
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 20/191 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G GV ++ ++A + K A +G A + G + + D A YR+
Sbjct: 285 GYCYEDGIGVDQDFNQATFWYQKSADQGYPWAECNLGYCFQNGIGVQKDDIRGAY-WYRR 343
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA+ G Q NLG Y +EEAVK +++ G++ A + L C G GV
Sbjct: 344 AAIQGHARAQHNLGFCYQNGIGVEKNEEEAVKWYKRSAERGNIFAYHSLGYCYQNGIGVS 403
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 272
N +EA WY+ +A+ + A + CY G G+P + R+A KW +++A+ G+ AQ
Sbjct: 404 TNEEEAVFWYMLSAKENHAPAQLSLGYCYRNGIGVPKNEREAVKWFRKSAEQGNALAQNS 463
Query: 273 ----LEHGLGL 279
E GLG+
Sbjct: 464 LGFCYEEGLGV 474
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM--DKKEA--AISLY 160
L G +++G GV KN +A+ F K A +G+ LA G Y E KK+ A+ Y
Sbjct: 426 LSLGYCYRNGIGVPKNEREAVKWFRKSAEQGNALAQNSLGFCYEEGLGVKKDCPRAVYWY 485
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++A + Q NLG Y ++AV QA++ H RA +L L G G
Sbjct: 486 HKSARQNNSWAQCNLGFCYANGIGVQQNNQKAVFWYKQAAVQNHARALDKLGLHFQTGLG 545
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
V+ NL+ A + +L+AAE +V A Y+ + CY G G + +A W ++AA
Sbjct: 546 VEKNLELAFKSFLKAAEQDHVAAQYHLANCYEKGLGCEVDLGKATAWFEKAA 597
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+++G GV KN ++A+ + + A RG+ A G Y +E A+ Y +A
Sbjct: 360 YQNGIGVEKNEEEAVKWYKRSAERGNIFAYHSLGYCYQNGIGVSTNEEEAVFWYMLSAKE 419
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
Q +LG Y + EAVK +++ G+ AQ L C G GV +
Sbjct: 420 NHAPAQLSLGYCYRNGIGVPKNEREAVKWFRKSAEQGNALAQNSLGFCYEEGLGVKKDCP 479
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
A WY ++A A N CY+ G G+ ++++A W K+AA H +A + GL
Sbjct: 480 RAVYWYHKSARQNNSWAQCNLGFCYANGIGVQQNNQKAVFWYKQAAVQNHARALDKLGLH 539
Query: 279 LFTEGEMMKAVVYLELATRAGETAA--DHV 306
T + K LELA ++ AA DHV
Sbjct: 540 FQTGLGVEKN---LELAFKSFLKAAEQDHV 566
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 13/189 (6%)
Query: 150 MDKKE-AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
M K E AA Y+ +A G+ GQ LG Y + EA++ A+ G A
Sbjct: 186 MPKDEKAAFRWYKASADQGNARGQGILGYCYGEGFGVSKDEAEAMRWYRLAAAQGETVAI 245
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y + C G GV+ N+QEA +WY +AE G A + CY G G+ QA W
Sbjct: 246 YNVGYCYEDGIGVEKNVQEAVKWYRLSAEQGNAFAQNSLGYCYEDGIGVDQDFNQATFWY 305
Query: 261 KRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSA 316
+++AD G+ A+ G G+ + + ++ + A G A H Q
Sbjct: 306 QKSADQGYPWAECNLGYCFQNGIGVQKDDIRGAYWYRRAAIQGHARAQHNLGFCYQNGIG 365
Query: 317 TSRDRAMLV 325
++ V
Sbjct: 366 VEKNEEEAV 374
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ G GV+K+ +A+ + K A + ++ A + G Y + A+ Y+QAAV
Sbjct: 468 YEEGLGVKKDCPRAVYWYHKSARQNNSWAQCNLGFCYANGIGVQQNNQKAVFWYKQAAVQ 527
Query: 167 G-----DPAG---QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
D G Q LG+ E A K +A+ HV AQY LA C +G G + +L
Sbjct: 528 NHARALDKLGLHFQTGLGVEKNLELAFKSFLKAAEQDHVAAQYHLANCYEKGLGCEVDLG 587
Query: 219 EAARWYLRAAEG 230
+A W+ +AA G
Sbjct: 588 KATAWFEKAAIG 599
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 20/207 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQA 163
G +++G GV N ++A+ ++ A A + G Y + K E A+ +R++
Sbjct: 393 GYCYQNGIGVSTNEEEAVFWYMLSAKENHAPAQLSLGYCYRNGIGVPKNEREAVKWFRKS 452
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ Q +LG Y + AV ++++ + AQ L C G GV
Sbjct: 453 AEQGNALAQNSLGFCYEEGLGVKKDCPRAVYWYHKSARQNNSWAQCNLGFCYANGIGVQQ 512
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 272
N Q+A WY +AA + RA+ L + G G+ + A K +AA+ H AQ
Sbjct: 513 NNQKAVFWYKQAAVQNHARALDKLGLHFQTGLGVEKNLELAFKSFLKAAEQDHVAAQYHL 572
Query: 273 ---LEHGLGLFTEGEMMKAVVYLELAT 296
E GLG E ++ KA + E A
Sbjct: 573 ANCYEKGLG--CEVDLGKATAWFEKAA 597
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 84/207 (40%), Gaps = 29/207 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G G+ ++ +A +L A RG LAM A ++ R+ G P
Sbjct: 93 YEFGFGLPRDFVQAETCYLSAAKRGDGLAM--------------ARLAFLRK---YGRPR 135
Query: 171 GQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
+ N + E VK ++ A++ AQY L +C H G G+ + + A R
Sbjct: 136 VRINRVEAEEWAEKVKRCPNAVDWIVQAATLDADPSAQYALGVCYHDGVGMPKDEKAAFR 195
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 278
WY +A+ G R CY G G+ +A +W + AA G A G G
Sbjct: 196 WYKASADQGNARGQGILGYCYGEGFGVSKDEAEAMRWYRLAAAQGETVAIYNVGYCYEDG 255
Query: 279 LFTEGEMMKAVVYLELATRAGETAADH 305
+ E + +AV + L+ G A +
Sbjct: 256 IGVEKNVQEAVKWYRLSAEQGNAFAQN 282
>gi|397676978|ref|YP_006518516.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397667|gb|AFN56994.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 374
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV +N A + K A +G A + G MY +AA++ ++A
Sbjct: 84 GALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRA 143
Query: 164 AVLGDPAGQFNLGISYLQ-------EEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
A GD Q NLG Y Q + + YQ A+ G+ A+Y L + +G GV
Sbjct: 144 AGQGDKVAQTNLGDMYYQGLGTAQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGHGVTQ 203
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
++ AA WY +AA+ + A YN + Y G+G+ + A W ++AAD G KAQL
Sbjct: 204 DMATAATWYQKAADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLN 262
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
N+ SY Q A + +A+ GH AQ+ L RG+GV N + A WY +AA+ G+V
Sbjct: 56 NVAQSYSQ--AREYFQKAADLGHAEAQFYLGALYERGKGVARNYKTAFSWYQKAADQGFV 113
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAV 289
+A N Y +G G+P + + A W++RAA G AQ G GL T E A
Sbjct: 114 KAENNVGSMYQYGVGVPQNFQAALTWLQRAAGQGDKVAQTNLGDMYYQGLGTAQEYKTAA 173
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRA 322
++ + A G A++ V+ Q ++D A
Sbjct: 174 IWYQKAAAQGYALAEYNLGVMYSQGHGVTQDMA 206
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + A + K AA+G LA + G+MY + A + Y++A
Sbjct: 156 GDMYYQGLGTAQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGHGVTQDMATAATWYQKA 215
Query: 164 AVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLA-LCLHRGRGVD 214
A PA ++N+ Y +Q++ V L + +A+ G V+AQ LA L H+ +G
Sbjct: 216 ADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLNLASLLYHQAKGQA 275
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N +EAA WY +AA G V A++ GEG + A W AA G
Sbjct: 276 QNYKEAALWYQKAAAQGDVVALFMLGKMAHLGEGAARNDVDAYMWFSLAAGLG 328
>gi|419798028|ref|ZP_14323471.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|385696369|gb|EIG26858.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 305
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 22/184 (11%)
Query: 132 AARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK 186
A +G+ + + GLMY+ D K+A +R+AA GD Q NLG Y Q + V
Sbjct: 34 AKQGNAASQFNLGLMYYSGKGAPKDYKQAE-HWFRRAAEQGDVDAQTNLGGLYYQGKGVV 92
Query: 187 LLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
Y+ A+ G +AQY L L G+G++ + +AA+WY +AA+ GY+ A Y+
Sbjct: 93 QDYKKAKYWFQKAAAQGFAKAQYDLGLIYFLGKGIEQDYGQAAQWYEKAAKQGYLDAQYD 152
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYL 292
++ Y G G+ + +A +W ++AA+ G +AQ HGLG+ + + +AV++L
Sbjct: 153 LAIMYDNGLGVGKAPEKAFQWYRKAAEQGDNQAQYTVATRYMHGLGV--QKDFKQAVLWL 210
Query: 293 ELAT 296
A
Sbjct: 211 HRAA 214
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 30/272 (11%)
Query: 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSF 128
L +A + +P L K N A + G + G+G K+ +A F
Sbjct: 15 LGHMANASNIPNFAETELEAKQGNAASQ--------FNLGLMYYSGKGAPKDYKQAEHWF 66
Query: 129 LKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE 183
+ A +G A + G +Y++ D K+A +++AA G Q++LG+ Y +
Sbjct: 67 RRAAEQGDVDAQTNLGGLYYQGKGVVQDYKKAKY-WFQKAAAQGFAKAQYDLGLIYFLGK 125
Query: 184 AVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
++ Y +A+ G++ AQY LA+ G GV ++A +WY +AAE G +A
Sbjct: 126 GIEQDYGQAAQWYEKAAKQGYLDAQYDLAIMYDNGLGVGKAPEKAFQWYRKAAEQGDNQA 185
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAV 289
Y + Y G G+ +QA W+ RAAD + KAQL+ HG G+ + + +A+
Sbjct: 186 QYTVATRYMHGLGVQKDFKQAVLWLHRAADQENIKAQLDLGVAYSHGFGVRQDDK--QAL 243
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDR 321
+ A G A + ++ ++ S +R
Sbjct: 244 YWYRKAAEQGNAEAQYNLGLMYEEGQGVSENR 275
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-------KEAAISLYRQAAVL 166
G+G+ ++ +A + K A +G A D +MY D E A YR+AA
Sbjct: 124 GKGIEQDYGQAAQWYEKAAKQGYLDAQYDLAIMY---DNGLGVGKAPEKAFQWYRKAAEQ 180
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q+ + Y+ ++AV L++A+ +++AQ L + G GV + +
Sbjct: 181 GDNQAQYTVATRYMHGLGVQKDFKQAVLWLHRAADQENIKAQLDLGVAYSHGFGVRQDDK 240
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+A WY +AAE G A YN L Y G+G+ + + A++W K+A D G
Sbjct: 241 QALYWYRKAAEQGNAEAQYNLGLMYEEGQGVSENRKVAKEWYKKACDNG 289
>gi|254000442|ref|YP_003052505.1| Sel1 domain-containing protein repeat-containing protein
[Methylovorus glucosetrophus SIP3-4]
gi|253987121|gb|ACT51978.1| Sel1 domain protein repeat-containing protein [Methylovorus
glucosetrophus SIP3-4]
Length = 255
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY-----LQE---EAVKLLYQ 190
A VDAG K A ++YR+ A GD Q+NLG+ Y +QE EAVK
Sbjct: 42 AAVDAG-------KFAQAAAMYRELAAAGDAKAQYNLGLMYARGDGVQENPQEAVKWYRM 94
Query: 191 ASIAGHVRAQYQLALC-LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
++ G AQY L + R GV + EA +WY +AAE G+VR+ N + Y G+ +
Sbjct: 95 SAEQGFAEAQYALGVIYFRRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVV 154
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 288
P QA KW AA+ G AQ G ++ EGE + A
Sbjct: 155 PQDIPQALKWFGLAAEQGDSDAQFNLG-NMYLEGEGVPA 192
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 132 AARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQ------ 181
AA G A + GLMY D + A+ YR +A G Q+ LG+ Y +
Sbjct: 60 AAAGDAKAQYNLGLMYARGDGVQENPQEAVKWYRMSAEQGFAEAQYALGVIYFRRDGGVA 119
Query: 182 ---EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+EA+K +A+ GHVR+Q L + RG V ++ +A +W+ AAE G A +N
Sbjct: 120 MDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVVPQDIPQALKWFGLAAEQGDSDAQFN 179
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQLEHGLGLFTEGEM 285
Y GEG+P S W+ AA+ HG++ + ++ E +M
Sbjct: 180 LGNMYLEGEGVPASMVNGYMWIWLAAENPQDAHGRSGKRKKILMYLEAKM 229
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 6/136 (4%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+A + + + AG +AQY L L RG GV N QEA +WY +AE G+ A Y +
Sbjct: 51 QAAAMYRELAAAGDAKAQYNLGLMYARGDGVQENPQEAVKWYRMSAEQGFAEAQYALGVI 110
Query: 243 YSFGE-GLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 297
Y + G+ + + +A KW ++AA+ GH ++QL G+ G ++ +A+ + LA
Sbjct: 111 YFRRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVVPQDIPQALKWFGLAAE 170
Query: 298 AGETAAD-HVKNVILQ 312
G++ A ++ N+ L+
Sbjct: 171 QGDSDAQFNLGNMYLE 186
>gi|422318977|ref|ZP_16400065.1| hypothetical protein HMPREF0005_05674, partial [Achromobacter
xylosoxidans C54]
gi|317406380|gb|EFV86604.1| hypothetical protein HMPREF0005_05674 [Achromobacter xylosoxidans
C54]
Length = 473
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 55/277 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + G G +++ KA++ F K A +G A + G MY+ A A+ +R+A
Sbjct: 196 GVMYADGLGGPRDVGKAVEWFRKAAEQGQPKAQNNLGAMYFTGSGVPADDKLAVQWWRRA 255
Query: 164 AVLGDPAGQFNLGISYL------------------------------------------- 180
A G+ A Q LG +YL
Sbjct: 256 ADQGNAAAQDRLGGAYLSGRGVPQDDLQASQWLRKAAEQDHAPAQDTLGTLYEQGLGVPK 315
Query: 181 -QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+ +AV+ +A+ G AQY LA GRGV +L A WY +AA+ GY RA +N
Sbjct: 316 DESQAVQWYRRAAEQGLDTAQYNLARQYDFGRGVPRDLASARAWYGKAADQGYPRAQFNL 375
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG----EMMKAVVYLEL 294
++ Y+ G+G+P QA + M++AA GH +A GLG ++ EG ++A L
Sbjct: 376 AVMYANGDGVPQDDAQAVRLMRKAATQGHRQATF--GLGVMYAEGRGVPRNLEAAFALIS 433
Query: 295 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 331
A + + ++++L + R+RA + D RA
Sbjct: 434 AIASPDEEMTQYRDMLLTHMPPGQRERAERLADELRA 470
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 18/232 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ +GRGV ++ A K A +G+ A G MY + +++ A+ +R+AA
Sbjct: 91 YANGRGVPQDYALAAQWCEKAAVQGNAEAQTMLGRMYAQGQGVARQEDLAVQWWRRAADQ 150
Query: 167 GDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G ++ LG + +A + A+ GH AQ L + G G ++
Sbjct: 151 GYAEARYQLGDHFFDAPAPRRDDAQARRWFALAAAQGHAEAQNNLGVMYADGLGGPRDVG 210
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A W+ +AAE G +A N Y G G+P + A +W +RAAD G+ AQ G G
Sbjct: 211 KAVEWFRKAAEQGQPKAQNNLGAMYFTGSGVPADDKLAVQWWRRAADQGNAAAQDRLG-G 269
Query: 279 LFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ G + ++A +L A A + +Q +D + V
Sbjct: 270 AYLSGRGVPQDDLQASQWLRKAAEQDHAPAQDTLGTLYEQGLGVPKDESQAV 321
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 144 GLMYWEMDKKE----AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QA 191
GLMY E A++ R+AA GD QFNL + Y V Y +A
Sbjct: 52 GLMYANAQGGEKDDAQAVAWLRRAADQGDAGAQFNLAVMYANGRGVPQDYALAAQWCEKA 111
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
++ G+ AQ L +G+GV A +W+ RAA+ GY A Y +
Sbjct: 112 AVQGNAEAQTMLGRMYAQGQGVARQEDLAVQWWRRAADQGYAEARYQLGDHFFDAPAPRR 171
Query: 252 SHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVK 307
QAR+W AA GH +AQ G+ GL ++ KAV + A G+ A +
Sbjct: 172 DDAQARRWFALAAAQGHAEAQNNLGVMYADGLGGPRDVGKAVEWFRKAAEQGQPKAQNNL 231
Query: 308 NVILQQLSATSRDRAMLVVDSWR 330
+ S D L V WR
Sbjct: 232 GAMYFTGSGVPADD-KLAVQWWR 253
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ L L +G + + +A W RAA+ G A +N ++ Y+ G G+P + A +
Sbjct: 47 AQDGLGLMYANAQGGEKDDAQAVAWLRRAADQGDAGAQFNLAVMYANGRGVPQDYALAAQ 106
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEGE 284
W ++AA G+ +AQ G ++ +G+
Sbjct: 107 WCEKAAVQGNAEAQTMLGR-MYAQGQ 131
>gi|344924997|ref|ZP_08778458.1| hypothetical protein COdytL_10171 [Candidatus Odyssella
thessalonicensis L13]
Length = 529
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 83/189 (43%), Gaps = 12/189 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
+A + L G ++ G GV ++ A+ + + A +G A GL Y + E
Sbjct: 293 DARMQLSLGYCYELGIGVPQDDTHAVHWYQQAANQGYAWAQFYLGLCYEHGECVPQSAEQ 352
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A ++AA QFNLGI Y + +A L +A+ GH AQ L C
Sbjct: 353 AAYWLQEAANQVHADAQFNLGIYYEEGNGVTEDDAQAAYLFQKAANQGHAEAQNNLGFCY 412
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV + +A WY +AA GY RA CY G+G+P Q W ++AA+ G
Sbjct: 413 TYGEGVSQDPAQAVYWYQQAANQGYARAQKKLGTCYEHGQGVPQDDTQTVYWYQQAANQG 472
Query: 268 HGKAQLEHG 276
+ Q G
Sbjct: 473 YADGQFNLG 481
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++HG V ++ ++A + A + A + G+ Y E + A L+++A
Sbjct: 337 GLCYEHGECVPQSAEQAAYWLQEAANQVHADAQFNLGIYYEEGNGVTEDDAQAAYLFQKA 396
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG Y E AV QA+ G+ RAQ +L C G+GV
Sbjct: 397 ANQGHAEAQNNLGFCYTYGEGVSQDPAQAVYWYQQAANQGYARAQKKLGTCYEHGQGVPQ 456
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+ + WY +AA GY +N CY G+G+P + QA W +AA G G+A
Sbjct: 457 DDTQTVYWYQQAANQGYADGQFNLGRCYRNGKGVPQNDIQADHWYLQAAMQGDGEA 512
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E+AV+ QA+ G R Q L C G GV + A WY +AA GY A + L
Sbjct: 279 EKAVRWCQQAAEQGDARMQLSLGYCYELGIGVPQDDTHAVHWYQQAANQGYAWAQFYLGL 338
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
CY GE +P S QA W++ AA+ H AQ LG++ E
Sbjct: 339 CYEHGECVPQSAEQAAYWLQEAANQVHADAQF--NLGIYYE 377
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLAL 205
E A+ +QAA GD Q +LG Y AV QA+ G+ AQ+ L L
Sbjct: 279 EKAVRWCQQAAEQGDARMQLSLGYCYELGIGVPQDDTHAVHWYQQAANQGYAWAQFYLGL 338
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
C G V + ++AA W AA + A +N + Y G G+ QA ++AA+
Sbjct: 339 CYEHGECVPQSAEQAAYWLQEAANQVHADAQFNLGIYYEEGNGVTEDDAQAAYLFQKAAN 398
Query: 266 CGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAG 299
GH +AQ G +T GE + +AV + + A G
Sbjct: 399 QGHAEAQNNLGF-CYTYGEGVSQDPAQAVYWYQQAANQG 436
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Y+L H G+ V+ N ++A RW +AAE G R + CY G G+P A
Sbjct: 258 INGLYRLGNAYHYGKSVNANFEKAVRWCQQAAEQGDARMQLSLGYCYELGIGVPQDDTHA 317
Query: 257 RKWMKRAADCGHGKAQLEHGLGLFTEGEMM 286
W ++AA+ G+ AQ GL + GE +
Sbjct: 318 VHWYQQAANQGYAWAQFYLGL-CYEHGECV 346
>gi|168333374|ref|ZP_02691654.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 249
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
G + G GV KN KA++ ++K A G + + G+ Y + E +S+ Y QA
Sbjct: 38 GVCYSTGAGVAKNYTKAVEWYMKAVAAGDPVTQCNLGVCYEKGLGVEKDLSVAEKWYLQA 97
Query: 164 AVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G LG Y E V K +A+ G A L C + G G++
Sbjct: 98 AEQGHIEALCKLGSWYYTGEVVEKNMVKAYKYFKKAAERGDYIAMCNLGTCYYFGNGIEK 157
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N +A WY ++A+ G RA Y+ CY G+G+ + +A +W K+AA+ G+ KAQ
Sbjct: 158 NATKAVEWYKKSAKLGNARAQYSLGNCYELGKGIEVDLVKAFEWYKKAAEQGNIKAQASV 217
Query: 276 GL----GLFTEGEMMKAVVYLELATRA 298
G G TE M A + + ++RA
Sbjct: 218 GACYANGFGTEKNMELAAKWFKKSSRA 244
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+S +A + +A+ GH +AQ + +C G GV N +A WY++A G
Sbjct: 10 GMSKSLYKAFRWYKRAADQGHCKAQCNVGVCYSTGAGVAKNYTKAVEWYMKAVAAGDPVT 69
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVY 291
N +CY G G+ A KW +AA+ GH +A + G +T E M+KA Y
Sbjct: 70 QCNLGVCYEKGLGVEKDLSVAEKWYLQAAEQGHIEALCKLGSWYYTGEVVEKNMVKAYKY 129
Query: 292 LELATRAGETAA 303
+ A G+ A
Sbjct: 130 FKKAAERGDYIA 141
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ +C G G+ +L +A RWY RAA+ G+ +A N +CYS G G+ ++ +A +W +
Sbjct: 1 MGICNVNGTGMSKSLYKAFRWYKRAADQGHCKAQCNVGVCYSTGAGVAKNYTKAVEWYMK 60
Query: 263 AADCGHGKAQL------EHGLGL 279
A G Q E GLG+
Sbjct: 61 AVAAGDPVTQCNLGVCYEKGLGV 83
>gi|338737655|ref|YP_004674617.1| Sel1 domain-containing protein [Hyphomicrobium sp. MC1]
gi|337758218|emb|CCB64043.1| Sel1 domain protein repeat-containing protein [Hyphomicrobium sp.
MC1]
Length = 907
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 16/189 (8%)
Query: 160 YRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+R AA GD + QF +G + + EA K +++ G AQY+L RG
Sbjct: 697 FRLAAANGDSSAQFEVGARFAEGEGVSQNFAEAAKWYQRSAEQGFALAQYRLGTLYERGL 756
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
G+ + ++A+ WYLRAAE G ++AM+N ++ + + A +W + AA G +
Sbjct: 757 GLKADRKQASTWYLRAAEQGNIKAMHNLAVLSANQSDRAPDYTTAAQWFEEAAKRGLPDS 816
Query: 272 QL------EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
Q E+GLG+ ++ A ++L LA + G+ A ++++ +L+A A +
Sbjct: 817 QFNLAVLYENGLGVTR--DLRTAFMWLSLAAQGGDADAVRRRDILRGKLTAQDITVARKM 874
Query: 326 VDSWRAMPS 334
+D+WR P+
Sbjct: 875 IDAWRMTPT 883
>gi|303272481|ref|XP_003055602.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463576|gb|EEH60854.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 251
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++HG GV +N+D AL+ + K A +G +A +AG+++ E + E A + +AA G
Sbjct: 73 GICYRHGHGVEQNIDTALEWYTKSAEKGHAVAQNNAGVVHHEKGQHEEAFKWFMKAADQG 132
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
LG Y EAVK +A+ GH AQ + C+H + +E
Sbjct: 133 FTHAAAKLGKCYKDGLGVEKNIPEAVKWYTKAAEQGHAGAQNSVG-CIHNDKE---QYEE 188
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
A +WY++AA G+ A N + Y+ G G+ + +A KW +AA+ G
Sbjct: 189 AFKWYMKAANQGFTDAAVNLGIYYADGLGVEKNIPEAIKWYAKAAEKG 236
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQAAVLGDPAGQ 172
V K DKALD + +GA +G D G+ Y E A+ Y ++A G Q
Sbjct: 46 VAKRYDKALDWYHRGARQGCEYCENDIGICYRHGHGVEQNIDTALEWYTKSAEKGHAVAQ 105
Query: 173 FNLGISYLQ----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
N G+ + + EEA K +A+ G A +L C G GV+ N+ EA +WY +AA
Sbjct: 106 NNAGVVHHEKGQHEEAFKWFMKAADQGFTHAAAKLGKCYKDGLGVEKNIPEAVKWYTKAA 165
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGE 284
E G+ A + ++ E + +A KW +AA+ G A + G+ GL E
Sbjct: 166 EQGHAGAQNSVGCIHNDKE----QYEEAFKWYMKAANQGFTDAAVNLGIYYADGLGVEKN 221
Query: 285 MMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ +A+ + A G+T A V L++L TSR+
Sbjct: 222 IPEAIKWYAKAAEKGDTYAAEV----LEEL--TSRE 251
>gi|448745716|ref|ZP_21727386.1| Tetratricopeptide-like helical [Halomonas titanicae BH1]
gi|445566444|gb|ELY22550.1| Tetratricopeptide-like helical [Halomonas titanicae BH1]
Length = 313
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 113/258 (43%), Gaps = 25/258 (9%)
Query: 95 LRPLRE-----AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
RPL E A LL G + GRGV +N +KA D A + +A + G +Y
Sbjct: 46 FRPLAEEGNPDAQALL--GGMYLRGRGVEQNFEKAADWLKLAADQNDAIAQNNLGWLYQN 103
Query: 150 -----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGH 196
D +E A+ Y QAA G Q NL Y VK Y A+ G
Sbjct: 104 GRGVSRDFQE-AMRWYHQAADQGMAGAQQNLAQMYYYGRGVKRDYTKAARWFELAAEQGL 162
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
V++Q L + GRGV N +EAA+WY AAE G + YN ++ + G G+ ++ A
Sbjct: 163 VKSQDYLGDMYYHGRGVANNHEEAAKWYTLAAEQGSQGSQYNIAVMHVQGLGVEKNYETA 222
Query: 257 RKWMKRAADCG--HGKAQLE--HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 312
W AA G H + L +G GL E ++ A VY LA G+ + ++
Sbjct: 223 AMWYHHAASQGDKHALSNLSSLYGQGLGVEENVVLAYVYASLAADLGDDSGAENRDFAAS 282
Query: 313 QLSATSRDRAMLVVDSWR 330
L++ +V+ W+
Sbjct: 283 LLNSDQIAEGDRLVEEWQ 300
>gi|336452954|ref|YP_004607420.1| hypothetical protein HBZC1_07220 [Helicobacter bizzozeronii CIII-1]
gi|335332981|emb|CCB79708.1| hypothetical protein HBZC1_07220 [Helicobacter bizzozeronii CIII-1]
Length = 321
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 18/243 (7%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-EMDKKE---AAISLYR 161
+ G + G+G K+L KA + K A G A V+ G MY + D E A+ ++
Sbjct: 62 KLGDIYSSGQGAHKDLYKAFKYYQKAADAGFAGAYVNLGTMYMSDQDGSEDYAKALKYFK 121
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVK-------LLYQASIAGHVRAQYQ-LALCLHRGRGV 213
+A LGD G NL + Y Q V Y+ +I G + YQ LA + G+GV
Sbjct: 122 KAVELGDALGYHNLALLYFQGLGVPRDFGKALYYYKKAINGGIIHSYQNLAKMYYSGQGV 181
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ ++A +++ +AA+GG V A + Y G+G+ +R+A ++ K+A D G
Sbjct: 182 AKDYKKALQYFQKAADGGIVEAYAGLGVMYKNGQGVRKDYRRALEYFKKAIDAGLVGVYN 241
Query: 274 EHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
G+ ++ +G+ M KA+ Y ++A R G A + ++ DR M V
Sbjct: 242 NIGM-MYLKGQGMKQDYAKALKYFKIAARVGVAGAYNNLGLVYANGLGVGVDRQMAYVYY 300
Query: 329 WRA 331
+A
Sbjct: 301 QKA 303
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 44/165 (26%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAGQF--------------------------------- 173
Y+E AI Y+ AA +GD G +
Sbjct: 35 YYEQKDYAKAIRYYQNAARMGDARGYYKLGDIYSSGQGAHKDLYKAFKYYQKAADAGFAG 94
Query: 174 ---NLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
NLG Y+ ++ A+K +A G + LAL +G GV + +A
Sbjct: 95 AYVNLGTMYMSDQDGSEDYAKALKYFKKAVELGDALGYHNLALLYFQGLGVPRDFGKALY 154
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+Y +A GG + + N + Y G+G+ +++A ++ ++AAD G
Sbjct: 155 YYKKAINGGIIHSYQNLAKMYYSGQGVAKDYKKALQYFQKAADGG 199
>gi|145637537|ref|ZP_01793194.1| hypothetical protein CGSHiHH_04215 [Haemophilus influenzae PittHH]
gi|145269223|gb|EDK09169.1| hypothetical protein CGSHiHH_04215 [Haemophilus influenzae PittHH]
Length = 255
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 14/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +GRGV+++ KA++ + K A +G A + G MY + D EA ++ +R+
Sbjct: 68 GVMYGNGRGVKQDYFKAVNWYRKAAEQGYAKAQFNLGNMYANGRGVKQDDFEA-VNWFRK 126
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G QFNLG+ Y + EAVK +A+ G+ +AQ L GRGV
Sbjct: 127 AAEQGHANAQFNLGVMYDKGQGVKQDDFEAVKWYRKAAEQGYAKAQGGLGAMYQSGRGVK 186
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ EA +W+ +AAE G A Y G+G+ ++ A++W +A D G
Sbjct: 187 QDDVEAVKWFRKAAEQGAANAQAILGFSYLLGKGVQVNKSLAKEWFSKACDNGE 240
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQF 173
+ N A +L A +G+ A + G+MY A++ YR+AA G QF
Sbjct: 42 QSNYQTAFKLWLPLAEQGNAKAQYNLGVMYGNGRGVKQDYFKAVNWYRKAAEQGYAKAQF 101
Query: 174 NLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
NLG Y EAV +A+ GH AQ+ L + +G+GV + EA +WY
Sbjct: 102 NLGNMYANGRGVKQDDFEAVNWFRKAAEQGHANAQFNLGVMYDKGQGVKQDDFEAVKWYR 161
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+AAE GY +A Y G G+ +A KW ++AA+ G AQ
Sbjct: 162 KAAEQGYAKAQGGLGAMYQSGRGVKQDDVEAVKWFRKAAEQGAANAQ 208
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAG 195
GL +E + A L+ A G+ Q+NLG+ Y VK Y +A+ G
Sbjct: 36 GLTAYEQSNYQTAFKLWLPLAEQGNAKAQYNLGVMYGNGRGVKQDYFKAVNWYRKAAEQG 95
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ +AQ+ L GRGV + EA W+ +AAE G+ A +N + Y G+G+ +
Sbjct: 96 YAKAQFNLGNMYANGRGVKQDDFEAVNWFRKAAEQGHANAQFNLGVMYDKGQGVKQDDFE 155
Query: 256 ARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMK 287
A KW ++AA+ G+ KAQ GLG ++ G +K
Sbjct: 156 AVKWYRKAAEQGYAKAQ--GGLGAMYQSGRGVK 186
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 172 QFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
QF G++ ++ A KL + G+ +AQY L + GRGV + +A WY +A
Sbjct: 32 QFQQGLTAYEQSNYQTAFKLWLPLAEQGNAKAQYNLGVMYGNGRGVKQDYFKAVNWYRKA 91
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
AE GY +A +N Y+ G G+ +A W ++AA+ GH AQ G+ ++ +G+ +K
Sbjct: 92 AEQGYAKAQFNLGNMYANGRGVKQDDFEAVNWFRKAAEQGHANAQFNLGV-MYDKGQGVK 150
>gi|255066185|ref|ZP_05318040.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
gi|255049730|gb|EET45194.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
Length = 140
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ YR+AA GD Q+NLG+ Y +AV+ +A+ GH +AQY L
Sbjct: 5 AVQWYRKAAEQGDAPAQYNLGVMYANGQGVRQDDAQAVQWYRKAAGQGHAKAQYNLGGMY 64
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV NL +A +WY +AAE G A YN + Y G+G+ +++ A++W +A D G
Sbjct: 65 ANGKGVLQNLVQAEQWYRKAAEQGIAEAQYNLGVMYDNGQGVRQNYKIAKEWFGKACDNG 124
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+AV+ +A+ G AQY L + G+GV + +A +WY +AA G+ +A YN
Sbjct: 4 QAVQWYRKAAEQGDAPAQYNLGVMYANGQGVRQDDAQAVQWYRKAAGQGHAKAQYNLGGM 63
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
Y+ G+G+ + QA +W ++AA+ G +AQ G+ ++ G+ ++
Sbjct: 64 YANGKGVLQNLVQAEQWYRKAAEQGIAEAQYNLGV-MYDNGQGVR 107
>gi|168334657|ref|ZP_02692802.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 721
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 12/185 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G GV +NL A + + K A +G A + G +Y++ M A + Y +A
Sbjct: 501 GICYEKGIGVLQNLYGAFEWYSKAAKQGYVAAQIKIGDLYFDGLGVMQNFYEAFAWYAKA 560
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD + + G+ +A +L Q + GH ++Y + G V
Sbjct: 561 AKDGDTLARHKVAECYENGTGVEIDMVKAFRLFEQLAKEGHAESRYDIGYFYGTGTVVHK 620
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A +WY AA GG+ +A Y+ +LCY G G+ + +A KW+K AAD G AQ E
Sbjct: 621 SARKAFKWYKSAAVGGFAQAQYSVALCYEVGIGVSKNKIKAFKWLKSAADGGCVDAQYEL 680
Query: 276 GLGLF 280
+ F
Sbjct: 681 AMAYF 685
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISL 159
++ G + G GV +N +A + K A G TLA Y E+D +A L
Sbjct: 534 IKIGDLYFDGLGVMQNFYEAFAWYAKAAKDGDTLARHKVAECYENGTGVEIDMVKA-FRL 592
Query: 160 YRQAAVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+ Q A G ++++G Y +A K A++ G +AQY +ALC G
Sbjct: 593 FEQLAKEGHAESRYDIGYFYGTGTVVHKSARKAFKWYKSAAVGGFAQAQYSVALCYEVGI 652
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV N +A +W AA+GG V A Y ++ Y G G + + W+++AA+ GH A
Sbjct: 653 GVSKNKIKAFKWLKSAADGGCVDAQYELAMAYFEGNGTSKDRPKGKWWLQKAANQGHEAA 712
Query: 272 QLE 274
L+
Sbjct: 713 LLK 715
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G GV K+ KA + K A R + G+ Y E E A + A
Sbjct: 393 GIAYMYGNGVEKDSTKAFEWLKKAAERKHKESQHKIGIAYAEGVGVEQNLEEAFRWSKLA 452
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q N+G++Y + +EA +A++ V AQ+ L +C +G GV
Sbjct: 453 ADQGYLFAQNNVGVAYEKGLGVKQDDDEAFAWYMKAALQNGVEAQFNLGICYEKGIGVLQ 512
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-----HGK 270
NL A WY +AA+ GYV A Y G G+ + +A W +AA G H
Sbjct: 513 NLYGAFEWYSKAAKQGYVAAQIKIGDLYFDGLGVMQNFYEAFAWYAKAAKDGDTLARHKV 572
Query: 271 AQ-LEHGLGLFTEGEMMKAVVYLELATRAG 299
A+ E+G G+ E +M+KA E + G
Sbjct: 573 AECYENGTGV--EIDMVKAFRLFEQLAKEG 600
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
+ QY LA +G + N+ W AAE GYV A Y+ +L Y+ G+G+ +A
Sbjct: 279 KGQYDLAWKYIKGIDIKKNVSAGIDWLRTAAENGYVYAQYHMALRYAAGDGIEQDEHKAW 338
Query: 258 KWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAV-VYLELATRAGETA 302
+W ++AA GH K+ + G G+ E + KA YL+LA ++ + A
Sbjct: 339 EWFEKAAAQGHAKSIYKLGKIYTDGIIVEKDYEKAFNCYLQLAQKSNKDA 388
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLY 160
L W ++ G ++KN+ +D A G A L Y D E A +
Sbjct: 284 LAW--KYIKGIDIKKNVSAGIDWLRTAAENGYVYAQYHMALRYAAGDGIEQDEHKAWEWF 341
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+AA G + LG Y E+A Q + + AQY++ + G G
Sbjct: 342 EKAAAQGHAKSIYKLGKIYTDGIIVEKDYEKAFNCYLQLAQKSNKDAQYKVGIAYMYGNG 401
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V+ + +A W +AAE + + + + Y+ G G+ + +A +W K AAD G+ AQ
Sbjct: 402 VEKDSTKAFEWLKKAAERKHKESQHKIGIAYAEGVGVEQNLEEAFRWSKLAADQGYLFAQ 461
Query: 273 ------LEHGLGL 279
E GLG+
Sbjct: 462 NNVGVAYEKGLGV 474
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 155 AAISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALC 206
A I R AA G Q+++ GI + +A + +A+ GH ++ Y+L
Sbjct: 300 AGIDWLRTAAENGYVYAQYHMALRYAAGDGIEQDEHKAWEWFEKAAAQGHAKSIYKLGKI 359
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G V+ + ++A YL+ A+ A Y + Y +G G+ +A +W+K+AA+
Sbjct: 360 YTDGIIVEKDYEKAFNCYLQLAQKSNKDAQYKVGIAYMYGNGVEKDSTKAFEWLKKAAER 419
Query: 267 GHGKAQLEHGLGL-FTEGEMMKAVVYLELATRAGETAADH 305
H ++Q H +G+ + EG ++ LE A R + AAD
Sbjct: 420 KHKESQ--HKIGIAYAEGVGVEQ--NLEEAFRWSKLAADQ 455
>gi|409202098|ref|ZP_11230301.1| hypothetical protein PflaJ_12210, partial [Pseudoalteromonas
flavipulchra JG1]
Length = 737
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +K G+GV ++ +KA++ F A +G+ G+MY + E A+ Y+ A
Sbjct: 169 GVMYKQGKGVAQSDEKAVEYFQLAAEQGNARGQFCVGVMYKQGKGVAQSDEKAVEYYQLA 228
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ GQ LG+ Y E+A++ A+ G AQ+ L + RG+GV
Sbjct: 229 AEQGNARGQCCLGVMYTHGIGVAQSDEKAIEYFQLAAEQGEADAQFNLGVMYERGKGVAQ 288
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A +Y AAE G A N + Y G+G+ S +A ++ + AA+ G AQ
Sbjct: 289 SDVKAVEYYQLAAEQGGAEAQCNLGVMYERGKGVAQSDEKAVEYYQLAAEQGDADAQCNL 348
Query: 276 GLGLFTEGEMM-----KAVVYLELATR 297
G+ ++ G+ + KAV Y +LA
Sbjct: 349 GV-MYINGQGVAQSDEKAVEYFQLAAE 374
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G+GV ++ +KA++ A +G+ G+MY E A+ YR A
Sbjct: 61 GVMYEYGQGVAQSDEKAVEYHRLAAEQGNARGQCCLGVMYEYGQGVAQSDEKAVEYYRLA 120
Query: 164 AVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD Q +LGI Y ++AVK A+ G+ R Q+ + + +G+GV
Sbjct: 121 AEQGDANAQCSLGIMYEFGQGVAQSDKKAVKYYRLAAEQGNARGQFCVGVMYKQGKGVAQ 180
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ ++A ++ AAE G R + + Y G+G+ S +A ++ + AA+ G+ + Q
Sbjct: 181 SDEKAVEYFQLAAEQGNARGQFCVGVMYKQGKGVAQSDEKAVEYYQLAAEQGNARGQCCL 240
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAA 303
HG+G+ E KA+ Y +LA GE A
Sbjct: 241 GVMYTHGIGVAQSDE--KAIEYFQLAAEQGEADA 272
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGI 177
+KA++ + A +G+ G+MY + E A+ YR AA G+ GQ LG+
Sbjct: 3 EKAVEYYRLAAEQGNARGQCYLGVMYRQGKGVAQSDEKAVEYYRLAAEQGNARGQCCLGV 62
Query: 178 SY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y E+AV+ A+ G+ R Q L + G+GV + ++A +Y AAE
Sbjct: 63 MYEYGQGVAQSDEKAVEYHRLAAEQGNARGQCCLGVMYEYGQGVAQSDEKAVEYYRLAAE 122
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM--- 286
G A + + Y FG+G+ S ++A K+ + AA+ G+ + Q G+ ++ +G+ +
Sbjct: 123 QGDANAQCSLGIMYEFGQGVAQSDKKAVKYYRLAAEQGNARGQFCVGV-MYKQGKGVAQS 181
Query: 287 --KAVVYLELATRAGETAADHVKNVILQQ 313
KAV Y +LA G V+ +Q
Sbjct: 182 DEKAVEYFQLAAEQGNARGQFCVGVMYKQ 210
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV ++ +KA++ + A +G+ G+MY E A+ +R A
Sbjct: 25 GVMYRQGKGVAQSDEKAVEYYRLAAEQGNARGQCCLGVMYEYGQGVAQSDEKAVEYHRLA 84
Query: 164 AVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ GQ LG+ Y E+AV+ A+ G AQ L + G+GV
Sbjct: 85 AEQGNARGQCCLGVMYEYGQGVAQSDEKAVEYYRLAAEQGDANAQCSLGIMYEFGQGVAQ 144
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A ++Y AAE G R + + Y G+G+ S +A ++ + AA+ G+ + Q
Sbjct: 145 SDKKAVKYYRLAAEQGNARGQFCVGVMYKQGKGVAQSDEKAVEYFQLAAEQGNARGQFCV 204
Query: 276 GLGLFTEGEMM-----KAVVYLELATRAG 299
G+ ++ +G+ + KAV Y +LA G
Sbjct: 205 GV-MYKQGKGVAQSDEKAVEYYQLAAEQG 232
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLYR 161
G + HG GV ++ +KA++ F A +G A + G+MY + D K A+ Y+
Sbjct: 241 GVMYTHGIGVAQSDEKAIEYFQLAAEQGEADAQFNLGVMYERGKGVAQSDVK--AVEYYQ 298
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA G Q NLG+ Y + E+AV+ A+ G AQ L + G+GV
Sbjct: 299 LAAEQGGAEAQCNLGVMYERGKGVAQSDEKAVEYYQLAAEQGDADAQCNLGVMYINGQGV 358
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
+ ++A ++ AAE RA++ + CY G+G+ S + +
Sbjct: 359 AQSDEKAVEYFQLAAEQENARAIFTLAYCYFRGKGVTQSFTETK 402
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 12/126 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA G ++ G+GV ++ KA++ + A +G A + G+MY E
Sbjct: 269 EADAQFNLGVMYERGKGVAQSDVKAVEYYQLAAEQGGAEAQCNLGVMYERGKGVAQSDEK 328
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ Y+ AA GD Q NLG+ Y+ E+AV+ A+ + RA + LA C
Sbjct: 329 AVEYYQLAAEQGDADAQCNLGVMYINGQGVAQSDEKAVEYFQLAAEQENARAIFTLAYCY 388
Query: 208 HRGRGV 213
RG+GV
Sbjct: 389 FRGKGV 394
>gi|295112080|emb|CBL28830.1| FOG: TPR repeat, SEL1 subfamily [Synergistetes bacterium SGP1]
Length = 846
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 87/177 (49%), Gaps = 12/177 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKE--AAISLYRQA 163
G + +G GV K+ KA + F RG + G++Y+ E K++ A+ Y +A
Sbjct: 657 GLMYANGNGVGKDYAKAAECFRIAGERGDAWGQYNLGVLYYGGEGVKQDYGKAVEWYCKA 716
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
G + +FNLG+ Y Q +A +L +A+ G AQ L +G GV
Sbjct: 717 VEQGLASAEFNLGLMYEQGCGVARDYAKAAELYRRAAEQGDAAAQCNLGFFYSKGWGVKQ 776
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N EA +WY +AAE G A N L Y G+G+ +H +A KW ++AA G+ AQ
Sbjct: 777 NNIEAEKWYHKAAEQGDATAQCNLGLMYEKGKGVEQNHEEAIKWYRKAARLGNPDAQ 833
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYR 161
+ G + G GVR+N +A + F + G A GLMY + K A A +R
Sbjct: 619 KLGLLYHEGDGVRRNYKQAAEWFRRAMEGGDASAPRYLGLMYANGNGVGKDYAKAAECFR 678
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGV 213
A GD GQ+NLG+ Y E VK Y ++ G A++ L L +G GV
Sbjct: 679 IAGERGDAWGQYNLGVLYYGGEGVKQDYGKAVEWYCKAVEQGLASAEFNLGLMYEQGCGV 738
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +AA Y RAAE G A N YS G G+ ++ +A KW +AA+ G AQ
Sbjct: 739 ARDYAKAAELYRRAAEQGDAAAQCNLGFFYSKGWGVKQNNIEAEKWYHKAAEQGDATAQC 798
Query: 274 EHGL 277
GL
Sbjct: 799 NLGL 802
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+A+ G A +L L H G GV N ++AA W+ RA EGG A L Y+ G G+
Sbjct: 607 KAANEGDAEAARKLGLLYHEGDGVRRNYKQAAEWFRRAMEGGDASAPRYLGLMYANGNGV 666
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 304
+ +A + + A + G Q G+ L+ GE + KAV + A G +A+
Sbjct: 667 GKDYAKAAECFRIAGERGDAWGQYNLGV-LYYGGEGVKQDYGKAVEWYCKAVEQGLASAE 725
Query: 305 HVKNVILQQLSATSRDRA 322
++ +Q +RD A
Sbjct: 726 FNLGLMYEQGCGVARDYA 743
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 10/136 (7%)
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALC 206
+A YR+AA GD LG+ Y + + V+ Y+ A G A L L
Sbjct: 600 SATESYRKAANEGDAEAARKLGLLYHEGDGVRRNYKQAAEWFRRAMEGGDASAPRYLGLM 659
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G GV + +AA + A E G YN + Y GEG+ + +A +W +A +
Sbjct: 660 YANGNGVGKDYAKAAECFRIAGERGDAWGQYNLGVLYYGGEGVKQDYGKAVEWYCKAVE- 718
Query: 267 GHGKAQLEHGLGLFTE 282
G A E LGL E
Sbjct: 719 -QGLASAEFNLGLMYE 733
>gi|329119677|ref|ZP_08248358.1| TPR repeat protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327464274|gb|EGF10578.1| TPR repeat protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 527
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 97/196 (49%), Gaps = 24/196 (12%)
Query: 96 RPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---E 149
+PL E A R GK + GRGV ++ +A+ F K AA+G+ LA + G+MY+
Sbjct: 58 QPLAETGNAQAQARLGKAYYQGRGVLQDYAQAVQWFEKSAAQGNALAQNNLGVMYYYGHG 117
Query: 150 MDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
+ K A ++ R+AA G P Q NLG Y EA K Y+ ++AG+ +A
Sbjct: 118 VAKDPAKSVQWMRKAAEQGLPQAQRNLGADYEDGFGVAKDPREAAKW-YKKALAGYEKAA 176
Query: 201 --------YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
+ LA+ GRGV+ + +++ W +AA GY A Y L Y G G+
Sbjct: 177 AQGSAQAQFNLAMMYSGGRGVEKSDEKSFEWLEKAARQGYTEAEYALGLRYGLGRGVAKD 236
Query: 253 HRQARKWMKRAADCGH 268
QA W ++AA+ GH
Sbjct: 237 DAQAAAWYRKAAEKGH 252
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R+ GRGV K+ +A + K A +G T A G Y D K+AA +
Sbjct: 224 GLRYGLGRGVAKDDAQAAAWYRKAAEKGHTAAAGLLGSRYLTGNGVAKDDKQAAEWF-AK 282
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGR-GV 213
AA GD Q+NLG+ Y + ++ LL +A+ G + AQY L +GR GV
Sbjct: 283 AAAKGDAFAQYNLGLMYNLGRGVPQDRTRSIDLLTKAAEQGRLSAQYLLYSLYAQGRNGV 342
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ ++A+ W +AAE G RA YN ++ Y G G+ +A +W+K+AA
Sbjct: 343 PQDDKQASYWLAKAAEQGDPRAEYNMAVRYRIGRGVEKDDAKAIEWLKKAA 393
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE------MDKK 153
+A G + GRGV ++ +++D K A +G A +Y + D K
Sbjct: 288 DAFAQYNLGLMYNLGRGVPQDRTRSIDLLTKAAEQGRLSAQYLLYSLYAQGRNGVPQDDK 347
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISY------LQEEAVKLLYQASIAGH-----VRAQYQ 202
+A+ L + AA GDP ++N+ + Y +++A + + A H V AQY
Sbjct: 348 QASYWLAK-AAEQGDPRAEYNMAVRYRIGRGVEKDDAKAIEWLKKAAAHETSASVLAQYD 406
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L +G GV + ++AA W +AA Y+ A + G G P + + ++
Sbjct: 407 LGSLYLKGEGVAQDDKQAAEWLEKAAGHDYIHAQKKLAALVITGTGTPQDTAKGMELLRA 466
Query: 263 AADCGHGKAQ----LEHGLGLFTEG-EMMKAVVYLELATRAGETAA 303
AA+ G +Q + + GLF G + +A V+LE A G A
Sbjct: 467 AAEQGDATSQTLLGMAYNTGLFGIGQDPAQARVWLEKAAAQGSKEA 512
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
FN G +AV + + G+ +AQ +L ++GRGV + +A +W+ ++A G
Sbjct: 45 FNAGRD---ADAVAIWQPLAETGNAQAQARLGKAYYQGRGVLQDYAQAVQWFEKSAAQGN 101
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 279
A N + Y +G G+ ++ +WM++AA+ G +AQ E G G+
Sbjct: 102 ALAQNNLGVMYYYGHGVAKDPAKSVQWMRKAAEQGLPQAQRNLGADYEDGFGV 154
>gi|302878784|ref|YP_003847348.1| sporulation domain-containing protein [Gallionella
capsiferriformans ES-2]
gi|302581573|gb|ADL55584.1| Sporulation domain-containing protein [Gallionella
capsiferriformans ES-2]
Length = 377
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 152 KKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQL 203
K +A++ R A D QFNL Y + EA K + A+ GHV A Y L
Sbjct: 30 KTDASLRELRIRADQNDAEAQFNLSSLYFKGQQVEQDYVEAAKWMQLAAEQGHVLAAYNL 89
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
A+ G+GV + AA+WY R+AEGG+V A N + Y+ GEG+ + +A KW + A
Sbjct: 90 AMMYSSGQGVAVDYAAAAKWYQRSAEGGFVLAQLNLGVAYANGEGVQKNDTEAVKWFRLA 149
Query: 264 ADCGHGKAQLEHGLGLFTEGE 284
A+ +AQ G+ ++ G+
Sbjct: 150 AEQNDAQAQFNLGV-MYANGQ 169
>gi|193213277|ref|YP_001999230.1| Sel1 domain-containing protein repeat-containing protein
[Chlorobaculum parvum NCIB 8327]
gi|193086754|gb|ACF12030.1| Sel1 domain protein repeat-containing protein [Chlorobaculum parvum
NCIB 8327]
Length = 524
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GVR++ +AL + AA+G + A + GLMY + D EA + Y +
Sbjct: 229 GLMYANGEGVRQDYVEALKWYRLSAAKGDSDAQFNLGLMYAKGYGVRQDYAEA-LKWYHK 287
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GD Q+N+G Y EA+K ++ G+ AQ+ + + +G GV
Sbjct: 288 AAAQGDAKAQYNIGWFYKNGYSVRQDYIEALKWYRLSAAQGNTEAQFNIGVMYEKGYGVR 347
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA +WYL +A G A YNT + Y G G+ + +A KW + +A G+ AQ
Sbjct: 348 QDYVEALKWYLLSATQGNALAQYNTGVMYHKGMGVRQDYTEALKWYRLSAAQGNAGAQSN 407
Query: 275 HGL 277
G+
Sbjct: 408 LGV 410
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV ++ +AL F AA+G+ A D GLMY D E A+ YR
Sbjct: 193 GLSYVKGEGVSQDYAEALKWFRLSAAQGNAGAQYDIGLMYANGEGVRQDYVE-ALKWYRL 251
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A GD QFNLG+ Y + EA+K ++A+ G +AQY + G V
Sbjct: 252 SAAKGDSDAQFNLGLMYAKGYGVRQDYAEALKWYHKAAAQGDAKAQYNIGWFYKNGYSVR 311
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA +WY +A G A +N + Y G G+ + +A KW +A G+ AQ
Sbjct: 312 QDYIEALKWYRLSAAQGNTEAQFNIGVMYEKGYGVRQDYVEALKWYLLSATQGNALAQYN 371
Query: 275 HGL----GLFTEGEMMKAVVYLELATRAGETAA 303
G+ G+ + +A+ + L+ G A
Sbjct: 372 TGVMYHKGMGVRQDYTEALKWYRLSAAQGNAGA 404
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 18/227 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+++G GVR++ ++AL + AA+G++ A G+ Y++ D EA + R +A
Sbjct: 124 YENGHGVRQDYEEALKWYHLSAAQGNSEAQRRIGVFYYKGYGVKQDYVEA-LKWLRLSAA 182
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNL 217
G+ Q ++G+SY++ E V Y ++ G+ AQY + L G GV +
Sbjct: 183 QGNAGAQRDIGLSYVKGEGVSQDYAEALKWFRLSAAQGNAGAQYDIGLMYANGEGVRQDY 242
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
EA +WY +A G A +N L Y+ G G+ + +A KW +AA G KAQ G
Sbjct: 243 VEALKWYRLSAAKGDSDAQFNLGLMYAKGYGVRQDYAEALKWYHKAAAQGDAKAQYNIGW 302
Query: 278 ----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G + ++A+ + L+ G T A V+ ++ +D
Sbjct: 303 FYKNGYSVRQDYIEALKWYRLSAAQGNTEAQFNIGVMYEKGYGVRQD 349
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G GVR++ +AL +L A +G+ LA + G+MY + D EA + YR
Sbjct: 337 GVMYEKGYGVRQDYVEALKWYLLSATQGNALAQYNTGVMYHKGMGVRQDYTEA-LKWYRL 395
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G+ Q NLG+ Y+ EA++LL ++ G+ AQ L RG GV
Sbjct: 396 SAAQGNAGAQSNLGVMYVMGVGVRQDYAEALRLLRLSAEKGYDFAQCNLGTMYARGEGVK 455
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ EA +WY +A G A +N Y G+G+ A++W ++A D
Sbjct: 456 QDYGEALKWYRLSAAQGNAEAQFNIGETYEKGQGVIQDESTAKEWYRKACD 506
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 15/193 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GVR++ +AL + K AA+G A + G Y D EA + YR
Sbjct: 265 GLMYAKGYGVRQDYAEALKWYHKAAAQGDAKAQYNIGWFYKNGYSVRQDYIEA-LKWYRL 323
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G+ QFN+G+ Y + EA+K ++ G+ AQY + H+G GV
Sbjct: 324 SAAQGNTEAQFNIGVMYEKGYGVRQDYVEALKWYLLSATQGNALAQYNTGVMYHKGMGVR 383
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA +WY +A G A N + Y G G+ + +A + ++ +A+ G+ AQ
Sbjct: 384 QDYTEALKWYRLSAAQGNAGAQSNLGVMYVMGVGVRQDYAEALRLLRLSAEKGYDFAQCN 443
Query: 275 HGLGLFTEGEMMK 287
G ++ GE +K
Sbjct: 444 LGT-MYARGEGVK 455
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +GRGVR++ +AL F AA+G + G +Y E A+ Y +
Sbjct: 85 GVMYANGRGVRQDYAEALKWFRLSAAQGYDVPQYSIGFIYENGHGVRQDYEEALKWYHLS 144
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ Q +G+ Y + EA+K L ++ G+ AQ + L +G GV
Sbjct: 145 AAQGNSEAQRRIGVFYYKGYGVKQDYVEALKWLRLSAAQGNAGAQRDIGLSYVKGEGVSQ 204
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA +W+ +A G A Y+ L Y+ GEG+ + +A KW + +A G AQ
Sbjct: 205 DYAEALKWFRLSAAQGNAGAQYDIGLMYANGEGVRQDYVEALKWYRLSAAKGDSDAQFNL 264
Query: 276 GLGLFTEG 283
GL ++ +G
Sbjct: 265 GL-MYAKG 271
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
+A + G + G+ VR++ +AL F AA+G+ A + G+MY D E
Sbjct: 41 DAEAQFKIGLMYALGKEVRQDYVEALKWFRLSAAQGNAGAQGNLGVMYANGRGVRQDYAE 100
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALC 206
A+ +R +A G Q+++G Y EEA+K + ++ G+ AQ ++ +
Sbjct: 101 -ALKWFRLSAAQGYDVPQYSIGFIYENGHGVRQDYEEALKWYHLSAAQGNSEAQRRIGVF 159
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
++G GV + EA +W +A G A + L Y GEG+ + +A KW + +A
Sbjct: 160 YYKGYGVKQDYVEALKWLRLSAAQGNAGAQRDIGLSYVKGEGVSQDYAEALKWFRLSAAQ 219
Query: 267 GHGKAQLEHGLGLFTEGEMMK 287
G+ AQ + GL ++ GE ++
Sbjct: 220 GNAGAQYDIGL-MYANGEGVR 239
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 20/194 (10%)
Query: 130 KGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--- 181
KGA +G A GLMY D EA + +R +A G+ Q NLG+ Y
Sbjct: 35 KGAEQGDAEAQFKIGLMYALGKEVRQDYVEA-LKWFRLSAAQGNAGAQGNLGVMYANGRG 93
Query: 182 -----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
EA+K ++ G+ QY + G GV + +EA +WY +A G A
Sbjct: 94 VRQDYAEALKWFRLSAAQGYDVPQYSIGFIYENGHGVRQDYEEALKWYHLSAAQGNSEAQ 153
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVY 291
+ Y G G+ + +A KW++ +A G+ AQ + GL + +GE + +A+ +
Sbjct: 154 RRIGVFYYKGYGVKQDYVEALKWLRLSAAQGNAGAQRDIGLS-YVKGEGVSQDYAEALKW 212
Query: 292 LELATRAGETAADH 305
L+ G A +
Sbjct: 213 FRLSAAQGNAGAQY 226
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYL------QE--EAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++ A GD QF +G+ Y Q+ EA+K ++ G+ AQ L + GRG
Sbjct: 34 KKGAEQGDAEAQFKIGLMYALGKEVRQDYVEALKWFRLSAAQGNAGAQGNLGVMYANGRG 93
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + EA +W+ +A GY Y+ Y G G+ + +A KW +A G+ +AQ
Sbjct: 94 VRQDYAEALKWFRLSAAQGYDVPQYSIGFIYENGHGVRQDYEEALKWYHLSAAQGNSEAQ 153
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
G+ G + + ++A+ +L L+ G A + + S+D A
Sbjct: 154 RRIGVFYYKGYGVKQDYVEALKWLRLSAAQGNAGAQRDIGLSYVKGEGVSQDYA 207
>gi|365920097|ref|ZP_09444450.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
gi|364578522|gb|EHM55723.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
Length = 486
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 22/222 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI----SLYRQA 163
G+ + G GV ++ KA D + + A RG+ A L Y+ + E + + + +A
Sbjct: 193 GRLYSGGLGVAQDHAKARDWYTQAAERGNAEAQSILALYYYNGEGGEQNLDKARTWFEKA 252
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A GD NLGI Y + E V Y QA+ G AQ LA H G GV
Sbjct: 253 AAQGDSDALRNLGIIYAEGEGVAQDYKKAYDYWKQAAAQGDTAAQNGLAQLYHDGLGVTQ 312
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A +W+ AAE A + ++CY GEG+ ++A +W ++AA GH AQ +
Sbjct: 313 DFAQAYQWWKTAAEQDNANAQNHLAICYLQGEGVNKDSKKACEWFEKAALRGHVVAQ--Y 370
Query: 276 GLG-LFTEGEMMK-------AVVYLELATRAGETAADHVKNV 309
GLG L+ E + A+++LE A AG + A + +
Sbjct: 371 GLGILYGHSEELDLPPQPATALLWLEKAAGAGHSGAQNALGI 412
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 39/218 (17%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
+DALR L G + G GV ++ KA D + + AA+G T A +Y +
Sbjct: 258 SDALRNL---------GIIYAEGEGVAQDYKKAYDYWKQAAAQGDTAAQNGLAQLYHD-- 306
Query: 152 KKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
LG++ +A + A+ + AQ LA+C +G
Sbjct: 307 ----------------------GLGVTQDFAQAYQWWKTAAEQDNANAQNHLAICYLQGE 344
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK--WMKRAADCGHG 269
GV+ + ++A W+ +AA G+V A Y + Y E L L + A W+++AA GH
Sbjct: 345 GVNKDSKKACEWFEKAALRGHVVAQYGLGILYGHSEELDLPPQPATALLWLEKAAGAGHS 404
Query: 270 KAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
AQ G+ G+ + KA Y E + G+ A
Sbjct: 405 GAQNALGIRYARGIDVNQDYGKARTYWEQSAAGGDPEA 442
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----- 162
G + G GV ++ +KA + K A + A GL+Y+ + R+
Sbjct: 121 GSHYAIGDGVAQDYEKARQWWEKAATQHDAEAQYQLGLLYFGGLGIAQDYTATREWCEQA 180
Query: 163 --------AAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+LG LG++ +A QA+ G+ AQ LAL + G G +
Sbjct: 181 AAQGNAAAQNLLGRLY-SGGLGVAQDHAKARDWYTQAAERGNAEAQSILALYYYNGEGGE 239
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-----HG 269
NL +A W+ +AA G A+ N + Y+ GEG+ +++A + K+AA G +G
Sbjct: 240 QNLDKARTWFEKAAAQGDSDALRNLGIIYAEGEGVAQDYKKAYDYWKQAAAQGDTAAQNG 299
Query: 270 KAQLEH-GLGL 279
AQL H GLG+
Sbjct: 300 LAQLYHDGLGV 310
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 164 AVLGDPAGQFNLGISYL----QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
A GD + Q LG +YL + A L +A+ G AQ+QL RG+GV N
Sbjct: 41 AKTGDASAQRELGDAYLVATAYDNARVWLEKAAAQGDAEAQHQLGNLYLRGQGVAKNSAI 100
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
A W +AA GY A Y+ G+G+ + +AR+W ++AA +AQ +
Sbjct: 101 ACEWQEKAAAQGYAAAQTLLGSHYAIGDGVAQDYEKARQWWEKAATQHDAEAQYQ 155
>gi|302879040|ref|YP_003847604.1| Sel1 domain-containing protein repeat-containing protein
[Gallionella capsiferriformans ES-2]
gi|302581829|gb|ADL55840.1| Sel1 domain protein repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 328
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQ 172
+ + AL + A++G +A + G+MY + D K AA YR AAV G+ + Q
Sbjct: 35 KNDFATALKEWEPLASQGDAVAQDNIGVMYDNGQGVQQDYKIAA-KWYRLAAVQGNASAQ 93
Query: 173 FNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
NLG+ Y E V Y+ +I G AQ L +G+G+ + +EA +WY
Sbjct: 94 ANLGMIYEHGEGVPKDYKEAIRWYRLAAGQGDAVAQGNLGRIYAKGQGIPLDYKEAVKWY 153
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 283
AA+ G A N Y FG+G+ +++A KW + AA G +Q G+ ++ +G
Sbjct: 154 RLAADQGVDTAQQNLGNAYLFGKGVAQDYKEAAKWFQLAAKQGIASSQYNLGV-MYRDGR 212
Query: 284 ----EMMKAVVYLELATRAGETAADH 305
+ M+A+ + +A G+ +A H
Sbjct: 213 GVLQDYMEAIAWFLVAADQGDASAQH 238
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ----- 190
S A DAG ++ + A+ + A GD Q N+G+ Y + V+ Y+
Sbjct: 21 SAYADYDAGEAAYKKNDFATALKEWEPLASQGDAVAQDNIGVMYDNGQGVQQDYKIAAKW 80
Query: 191 ---ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
A++ G+ AQ L + G GV + +EA RWY AA G A N Y+ G+
Sbjct: 81 YRLAAVQGNASAQANLGMIYEHGEGVPKDYKEAIRWYRLAAGQGDAVAQGNLGRIYAKGQ 140
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG---EMMKAVVYLELATRAG 299
G+PL +++A KW + AAD G AQ G LF +G + +A + +LA + G
Sbjct: 141 GIPLDYKEAVKWYRLAADQGVDTAQQNLGNAYLFGKGVAQDYKEAAKWFQLAAKQG 196
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++HG GV K+ +A+ + A +G +A + G +Y + +D KEA + YR
Sbjct: 97 GMIYEHGEGVPKDYKEAIRWYRLAAGQGDAVAQGNLGRIYAKGQGIPLDYKEA-VKWYRL 155
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG +YL +EA K A+ G +QY L + GRGV
Sbjct: 156 AADQGVDTAQQNLGNAYLFGKGVAQDYKEAAKWFQLAAKQGIASSQYNLGVMYRDGRGVL 215
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+ EA W+L AA+ G A +N Y+ G+G+
Sbjct: 216 QDYMEAIAWFLVAADQGDASAQHNLGAMYASGQGV 250
>gi|242280592|ref|YP_002992721.1| Sel1 domain-containing protein repeat-containing protein
[Desulfovibrio salexigens DSM 2638]
gi|242123486|gb|ACS81182.1| Sel1 domain protein repeat-containing protein [Desulfovibrio
salexigens DSM 2638]
Length = 417
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ +G GV+++ +A +L A +G A + MY E A+S YR+AA
Sbjct: 105 YANGIGVKQDHAQAAQLYLPIAEQGLAEAQNNLAAMYENGLGVTQNLETALSWYRKAAEQ 164
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G P Q+NLGI Y +AV +A+ +V AQ L + G+GV+ +
Sbjct: 165 GLPIAQYNLGIMYAHGMGIDQDFNQAVHWYRKAAEQDNVMAQNNLGSMYNNGKGVEQDYS 224
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
AA WY RAAE G+ A N Y G GL + QA +W +AA+ G KAQ + +
Sbjct: 225 IAAYWYRRAAEQGFAGAQLNLGRLYENGLGLAQDYAQASQWYTKAAEQGLPKAQHDLAI- 283
Query: 279 LFTEG 283
++ EG
Sbjct: 284 MYAEG 288
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 18/243 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
G + HG G+ ++ ++A+ + K A + + +A + G MY E S+ YR+A
Sbjct: 174 GIMYAHGMGIDQDFNQAVHWYRKAAEQDNVMAQNNLGSMYNNGKGVEQDYSIAAYWYRRA 233
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG Y +A + +A+ G +AQ+ LA+ G GV
Sbjct: 234 AEQGFAGAQLNLGRLYENGLGLAQDYAQASQWYTKAAEQGLPKAQHDLAIMYAEGLGVPQ 293
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE- 274
N A WYL AAE GY + YN L + G G+ +A +W +AA G +AQ
Sbjct: 294 NYSHAVLWYLTAAEQGYALSQYNLGLMFDSGLGVKQDRTRAAQWYLKAAKQGVPEAQYNI 353
Query: 275 ---HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 331
+ G + ++A ++ L+ G A ++ + +++ + +A + + W+
Sbjct: 354 AAMYESGQDITQDYIQAYMWFSLSAERGIKQAVKSRDRLKSRMTQSEIQKASKLAEDWQ- 412
Query: 332 MPS 334
PS
Sbjct: 413 -PS 414
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEA 155
A + G F G G++++ KA F K A +GS A + +MY + D +A
Sbjct: 59 AKAMYNLGIMFSSGSGMQRDFSKAAMWFRKAADQGSVGAQYNLAMMYANGIGVKQDHAQA 118
Query: 156 AISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCL 207
A LY A G Q NL G++ E A+ +A+ G AQY L +
Sbjct: 119 A-QLYLPIAEQGLAEAQNNLAAMYENGLGVTQNLETALSWYRKAAEQGLPIAQYNLGIMY 177
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G+D + +A WY +AAE V A N Y+ G+G+ + A W +RAA+ G
Sbjct: 178 AHGMGIDQDFNQAVHWYRKAAEQDNVMAQNNLGSMYNNGKGVEQDYSIAAYWYRRAAEQG 237
Query: 268 HGKAQL------EHGLGL 279
AQL E+GLGL
Sbjct: 238 FAGAQLNLGRLYENGLGL 255
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E A +L +A+ H +A Y L + G G+ + +AA W+ +AA+ G V A YN ++
Sbjct: 44 ELASRLFLKAAEQDHAKAMYNLGIMFSSGSGMQRDFSKAAMWFRKAADQGSVGAQYNLAM 103
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 279
Y+ G G+ H QA + A+ G +AQ E+GLG+
Sbjct: 104 MYANGIGVKQDHAQAAQLYLPIAEQGLAEAQNNLAAMYENGLGV 147
>gi|219870295|ref|YP_002474670.1| Sel1 domain protein, repeat-containing protein [Haemophilus
parasuis SH0165]
gi|219690499|gb|ACL31722.1| Sel1 domain protein, repeat-containing protein [Haemophilus
parasuis SH0165]
Length = 251
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + + +A +L G +K G GV++N +A F K A +G A + G MY++
Sbjct: 53 AEQGVAQAQAIL--GLMYKEGDGVKQNYHQAFKWFQKAAEQGDKNAQLYLGFMYYDGEGV 110
Query: 150 -MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
D +AA +++AA GD Q NLG+ Y +AVK +A+ G AQ
Sbjct: 111 RQDYHQAA-KWFQKAAEQGDVMAQNNLGVMYSDGQGVRQDYHQAVKWYQKAAEQGDASAQ 169
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ L L G+GV + +A +W+ +AAE G +A Y GEG+ + A+ W+
Sbjct: 170 FNLGLKYQNGQGVSQDYHQALKWFQKAAEQGDPKAQGMLGTMYVLGEGVRQNLETAKMWL 229
Query: 261 KRAADCG 267
+A D G
Sbjct: 230 GKACDSG 236
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 79/167 (47%), Gaps = 12/167 (7%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQF 173
++N A F + A +G A GLMY E D A +++AA GD Q
Sbjct: 39 QENYQVAFPLFKELAEQGVAQAQAILGLMYKEGDGVKQNYHQAFKWFQKAAEQGDKNAQL 98
Query: 174 NLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
LG Y E V+ Y +A+ G V AQ L + G+GV + +A +WY
Sbjct: 99 YLGFMYYDGEGVRQDYHQAAKWFQKAAEQGDVMAQNNLGVMYSDGQGVRQDYHQAVKWYQ 158
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+AAE G A +N L Y G+G+ + QA KW ++AA+ G KAQ
Sbjct: 159 KAAEQGDASAQFNLGLKYQNGQGVSQDYHQALKWFQKAAEQGDPKAQ 205
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVR 198
Y E + + A L+++ A G Q LG+ Y + + VK Y +A+ G
Sbjct: 36 YIEQENYQVAFPLFKELAEQGVAQAQAILGLMYKEGDGVKQNYHQAFKWFQKAAEQGDKN 95
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ L + G GV + +AA+W+ +AAE G V A N + YS G+G+ + QA K
Sbjct: 96 AQLYLGFMYYDGEGVRQDYHQAAKWFQKAAEQGDVMAQNNLGVMYSDGQGVRQDYHQAVK 155
Query: 259 WMKRAADCGHGKAQLEHGL 277
W ++AA+ G AQ GL
Sbjct: 156 WYQKAAEQGDASAQFNLGL 174
>gi|421863475|ref|ZP_16295172.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379065|emb|CBX22367.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 306
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 13/189 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G GVR++ +A+ + K A +G A D GLMY++ + A+ +R+A
Sbjct: 84 GAMYYTGEGVRQDDAQAVQWYRKAAEQGLAQAQSDLGLMYYKGEGVRQDNAQAVHWFRKA 143
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG+ Y Q +AV+ +A+ G +AQ L +GRGV
Sbjct: 144 AEQGLAQAQSNLGVMYAQGRGVRQDDAQAVQWYRRAAEQGDAQAQSYLGDMYAQGRGVRQ 203
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ + +WY +AAE G RA +N + Y G G+ QA +W ++AA+ + AQ
Sbjct: 204 DDAQVVQWYRKAAEQGLARAQFNLGVMYDNGRGVRQDDAQAVQWYRKAAEQEYADAQNNL 263
Query: 276 GLGLFTEGE 284
G+ ++ +G+
Sbjct: 264 GV-MYEQGQ 271
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G GVR++ +A+ F K A +G A + G+MY + D +A + YR+AA
Sbjct: 123 YYKGEGVRQDNAQAVHWFRKAAEQGLAQAQSNLGVMYAQGRGVRQDDAQA-VQWYRRAAE 181
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD Q LG Y Q + V+ +A+ G RAQ+ L + GRGV +
Sbjct: 182 QGDAQAQSYLGDMYAQGRGVRQDDAQVVQWYRKAAEQGLARAQFNLGVMYDNGRGVRQDD 241
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+A +WY +AAE Y A N + Y G+G+ A++W +A D G+
Sbjct: 242 AQAVQWYRKAAEQEYADAQNNLGVMYEQGQGVLQDLALAQEWYGKACDNGN 292
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEE- 183
L+ A +G+ A D G+MY+ + A+ +R+AA G Q+NLG Y E
Sbjct: 33 LQAAEQGNAQAQSDLGVMYYTGEGVRQDDVQAVQWFRKAAEQGYAGAQYNLGAMYYTGEG 92
Query: 184 -------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
AV+ +A+ G +AQ L L ++G GV + +A W+ +AAE G +A
Sbjct: 93 VRQDDAQAVQWYRKAAEQGLAQAQSDLGLMYYKGEGVRQDNAQAVHWFRKAAEQGLAQAQ 152
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N + Y+ G G+ QA +W +RAA+ G +AQ
Sbjct: 153 SNLGVMYAQGRGVRQDDAQAVQWYRRAAEQGDAQAQ 188
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 13/188 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G GVR++ +A+ F K A +G A + G MY+ + A+ YR+A
Sbjct: 48 GVMYYTGEGVRQDDVQAVQWFRKAAEQGYAGAQYNLGAMYYTGEGVRQDDAQAVQWYRKA 107
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q +LG+ Y + E AV +A+ G +AQ L + +GRGV
Sbjct: 108 AEQGLAQAQSDLGLMYYKGEGVRQDNAQAVHWFRKAAEQGLAQAQSNLGVMYAQGRGVRQ 167
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A +WY RAAE G +A Y+ G G+ Q +W ++AA+ G +AQ
Sbjct: 168 DDAQAVQWYRRAAEQGDAQAQSYLGDMYAQGRGVRQDDAQVVQWYRKAAEQGLARAQFNL 227
Query: 276 GLGLFTEG 283
G+ ++ G
Sbjct: 228 GV-MYDNG 234
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
QAA G+ Q +LG+ Y E AV+ +A+ G+ AQY L + G GV
Sbjct: 34 QAAEQGNAQAQSDLGVMYYTGEGVRQDDVQAVQWFRKAAEQGYAGAQYNLGAMYYTGEGV 93
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +A +WY +AAE G +A + L Y GEG+ + QA W ++AA+ G +AQ
Sbjct: 94 RQDDAQAVQWYRKAAEQGLAQAQSDLGLMYYKGEGVRQDNAQAVHWFRKAAEQGLAQAQS 153
Query: 274 EHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
G+ ++ +G + +AV + A G+ A + Q +D A +V
Sbjct: 154 NLGV-MYAQGRGVRQDDAQAVQWYRRAAEQGDAQAQSYLGDMYAQGRGVRQDDAQVV 209
>gi|116748921|ref|YP_845608.1| Sel1 domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116697985|gb|ABK17173.1| Sel1 domain protein repeat-containing protein [Syntrophobacter
fumaroxidans MPOB]
Length = 246
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 30/219 (13%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
R + AL F GAARG+T A MY + G+
Sbjct: 48 RGDYGTALREFRAGAARGNTDAQKMLAAMY------------------------ETGTGV 83
Query: 178 SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
+ EA K A+ +G AQ+ +A + GRG +L EA WY +AAEGG+ A Y
Sbjct: 84 TRDYGEAFKWYSAAARSGDSSAQFMVAQMYYEGRGGPRDLSEAVTWYRKAAEGGFPEAQY 143
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYL 292
N +L + G G +A +W ++AA+ G +AQ GL ++ +GE ++A ++L
Sbjct: 144 NLALFHEIGRGTQRDMNEASRWYRKAAEKGLPQAQARLGL-MYVKGEGVLQDYVQAHMWL 202
Query: 293 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 331
LA GE A + + ++++ +A + W A
Sbjct: 203 NLAASNGEEGARNALEALSAKMTSDQVAKAQEMARKWHA 241
>gi|398380209|ref|ZP_10538327.1| TPR repeat-containing protein [Rhizobium sp. AP16]
gi|397721525|gb|EJK82073.1| TPR repeat-containing protein [Rhizobium sp. AP16]
Length = 530
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 26/237 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-------KEAAISLY 160
G + HG GVR++ AL + K A +G A G MY DK + AI Y
Sbjct: 163 GYMYGHGLGVREDDAIALGWYRKAADQGRADAQYALGYMY---DKGLGTAADQSLAIDWY 219
Query: 161 RQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+++A GDP G++ LG +Y +A +++ G AQY L G G
Sbjct: 220 QKSADQGDPQGEYALGYAYTNGRGVDQDDGQAYSWYKKSAEQGRADAQYGLGYSFANGLG 279
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + + A +WY +AA+ G A Y Y+ G+G+P++ A +W ++AA G A+
Sbjct: 280 VPRDYKLALQWYRKAADQGRADAQYAVGYLYANGKGVPVNDNVAVEWYRKAA--AQGDAE 337
Query: 273 LEHGLG-LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
E+ L ++T+G + KA+ + + G A + I + T+ D+
Sbjct: 338 GEYALATMYTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAPDKGQ 394
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G F +G GV ++ AL + K A +G A G +Y A+ YR+A
Sbjct: 271 GYSFANGLGVPRDYKLALQWYRKAADQGRADAQYAVGYLYANGKGVPVNDNVAVEWYRKA 330
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD G++ L G+S +A++ +++ GH AQY L +G+G
Sbjct: 331 AAQGDAEGEYALATMYTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAP 390
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +AA WY +AA+ G Y Y G G+P + QA + ++AA+ G+ +AQ +
Sbjct: 391 DKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVPKDYGQAADFFRKAAEQGNARAQ--Y 448
Query: 276 GLG-LFTEGE 284
GLG ++ G+
Sbjct: 449 GLGSMYYSGD 458
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + +G+GV N + A++ + K AA+G MY + + K + A+ YR++
Sbjct: 307 GYLYANGKGVPVNDNVAVEWYRKAAAQGDAEGEYALATMYTDGRGLSKNDGKALEWYRKS 366
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G P Q+ LG Y + + A +A+ G QY L + G GV
Sbjct: 367 AEQGHPDAQYALGYIYDKGQGTAPDKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVPK 426
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +AA ++ +AAE G RA Y Y G+G+P QA KW ++AA G G + +H
Sbjct: 427 DYGQAADFFRKAAEQGNARAQYGLGSMYYSGDGVPKDIGQATKWFRKAA--GQGLPEAQH 484
Query: 276 GL 277
L
Sbjct: 485 SL 486
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 154 EAAISL--YRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQL 203
+ +ISL + Q A G+ A Q+ LG Y + +AV+ +A+ G+V+A+Y L
Sbjct: 31 DTSISLKYWVQFAKDGNAAAQYGLGYRYAKGQGVEHDDAQAVQWYRKAAAQGNVQAEYAL 90
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
A G GVD +L+EA WY +AAE GY A Y Y+ G G + + QA W
Sbjct: 91 AYMYSNGLGVDKDLKEANTWYRKAAEHGYADAQYAIGYSYANGRGKDVDNEQAVGW 146
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 14/150 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ GRG+ KN KAL+ + K A +G A G +Y + DK +AA + YR+AA
Sbjct: 346 YTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAPDKGQAA-AWYRKAAD 404
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
G GQ+ LG Y V Y +A+ G+ RAQY L + G GV ++
Sbjct: 405 QGSAGGQYALGYLYYNGSGVPKDYGQAADFFRKAAEQGNARAQYGLGSMYYSGDGVPKDI 464
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+A +W+ +AA G A ++ S + GE
Sbjct: 465 GQATKWFRKAAGQGLPEAQHSLSYMAANGE 494
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 53/226 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R+ G+GV + +A+ + K AA+G+ A MY + D KE A + YR+
Sbjct: 55 GYRYAKGQGVEHDDAQAVQWYRKAAAQGNVQAEYALAYMYSNGLGVDKDLKE-ANTWYRK 113
Query: 163 AAVLGDPAGQFNLGISYL------------------------------------------ 180
AA G Q+ +G SY
Sbjct: 114 AAEHGYADAQYAIGYSYANGRGKDVDNEQAVGWYQKSAAQDQAQAQYALGYMYGHGLGVR 173
Query: 181 QEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+++A+ L + +A+ G AQY L +G G + A WY ++A+ G + Y
Sbjct: 174 EDDAIALGWYRKAADQGRADAQYALGYMYDKGLGTAADQSLAIDWYQKSADQGDPQGEYA 233
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEG 283
Y+ G G+ QA W K++A+ G+A ++GLG F G
Sbjct: 234 LGYAYTNGRGVDQDDGQAYSWYKKSAE--QGRADAQYGLGYSFANG 277
>gi|184156430|ref|YP_001844769.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ACICU]
gi|260557655|ref|ZP_05829869.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|332875557|ref|ZP_08443370.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|417548213|ref|ZP_12199294.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
gi|417567536|ref|ZP_12218408.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|417576511|ref|ZP_12227356.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|421631487|ref|ZP_16072156.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|445450083|ref|ZP_21444418.1| Sel1 repeat protein [Acinetobacter baumannii WC-A-92]
gi|445491657|ref|ZP_21459888.1| Sel1 repeat protein [Acinetobacter baumannii AA-014]
gi|183208024|gb|ACC55422.1| TPR repeat, SEL1 subfamily protein [Acinetobacter baumannii ACICU]
gi|193075991|gb|ABO10574.2| putative signal peptide [Acinetobacter baumannii ATCC 17978]
gi|260408828|gb|EEX02132.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|332736260|gb|EGJ67274.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|395553208|gb|EJG19216.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|395569732|gb|EJG30394.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|400388512|gb|EJP51584.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
gi|408692759|gb|EKL38373.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|444756066|gb|ELW80625.1| Sel1 repeat protein [Acinetobacter baumannii WC-A-92]
gi|444764195|gb|ELW88518.1| Sel1 repeat protein [Acinetobacter baumannii AA-014]
gi|452950078|gb|EME55543.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii MSP4-16]
Length = 230
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDP 169
+GV KN ++A GS A G+MY+ E D K A + +AA G
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRA-FEYFAKAADKGHA 112
Query: 170 AGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NLG+ Y + E+A + +A+ G+ A+Y LA +G GV + ++A
Sbjct: 113 KAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQAL 172
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+WY +AAE A YN + Y GEG P + + A+KW ++AAD G A+
Sbjct: 173 KWYTKAAEHNESDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAGDSDAK 223
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 167 GDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G P Q++LGI L E+A K L A G V A+Y L + G GV+ ++
Sbjct: 37 GQPIAQYHLGIMLLTGEQGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDM 96
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ A ++ +AA+ G+ +A YN + Y GEG ++ QA +W RAA+ G+ A+
Sbjct: 97 KRAFEYFAKAADKGHAKAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAE 151
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGG 231
F+L S E +V + + G AQY L + L G +GV N ++A +W A + G
Sbjct: 15 FSLHSSAFAEPSVADVQYRAQQGQPIAQYHLGIMLLTGEQGVVKNYEQAFKWLTAADQNG 74
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
V A Y+ + Y G G+ ++A ++ +AAD GH KAQ G+ L+ GE
Sbjct: 75 SVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGV-LYDRGE 126
>gi|222086264|ref|YP_002544796.1| hypothetical protein Arad_2748 [Agrobacterium radiobacter K84]
gi|221723712|gb|ACM26868.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 530
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 26/237 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-------KEAAISLY 160
G + HG GVR++ AL + K A +G A G MY DK + AI Y
Sbjct: 163 GYMYGHGLGVREDDAIALGWYRKAADQGRADAQYALGYMY---DKGLGTAADQSLAIDWY 219
Query: 161 RQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+++A GDP G++ LG +Y +A +++ G AQY L G G
Sbjct: 220 QKSADQGDPQGEYALGYAYTNGRGVDQDDGQAYSWYKKSAEQGRADAQYGLGYSFANGLG 279
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + + A +WY +AA+ G A Y Y+ G+G+P++ A +W ++AA G A+
Sbjct: 280 VPRDYKLALQWYRKAADQGRADAQYAVGYLYANGKGVPVNDNVAVEWYRKAA--AQGDAE 337
Query: 273 LEHGLG-LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
E+ L ++T+G + KA+ + + G A + I + T+ D+
Sbjct: 338 GEYALATMYTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAPDKGQ 394
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G F +G GV ++ AL + K A +G A G +Y A+ YR+A
Sbjct: 271 GYSFANGLGVPRDYKLALQWYRKAADQGRADAQYAVGYLYANGKGVPVNDNVAVEWYRKA 330
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD G++ L G+S +A++ +++ GH AQY L +G+G
Sbjct: 331 AAQGDAEGEYALATMYTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAP 390
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +AA WY +AA+ G Y Y G G+P + QA + ++AA+ G+ +AQ +
Sbjct: 391 DKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVPKDYGQAADFFRKAAEQGNARAQ--Y 448
Query: 276 GLG-LFTEGE 284
GLG ++ G+
Sbjct: 449 GLGSMYYSGD 458
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + +G+GV N + A++ + K AA+G MY + + K + A+ YR++
Sbjct: 307 GYLYANGKGVPVNDNVAVEWYRKAAAQGDAEGEYALATMYTDGRGLSKNDGKALEWYRKS 366
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G P Q+ LG Y + + A +A+ G QY L + G GV
Sbjct: 367 AEQGHPDAQYALGYIYDKGQGTAPDKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVPK 426
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +AA ++ +AAE G RA Y Y G+G+P QA KW ++AA G G + +H
Sbjct: 427 DYGQAADFFRKAAEQGNARAQYGLGSMYYSGDGVPKDIGQATKWFRKAA--GQGLPEAQH 484
Query: 276 GL 277
L
Sbjct: 485 SL 486
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 154 EAAISL--YRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQL 203
+ +ISL + Q A G+ A Q+ LG Y + +AV+ +A+ G+V+A+Y L
Sbjct: 31 DTSISLKYWVQFAKDGNAAAQYGLGYRYAKGQGVEHDDAQAVQWYRKAAAQGNVQAEYAL 90
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
A G GVD +L++A WY +AAE GY A Y Y+ G G + + QA W
Sbjct: 91 AYMYSNGLGVDKDLKQANAWYRKAAEQGYADAQYAIGYSYANGRGTDVDNEQAVGW 146
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 14/150 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ GRG+ KN KAL+ + K A +G A G +Y + DK +AA + YR+AA
Sbjct: 346 YTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAPDKGQAA-AWYRKAAD 404
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
G GQ+ LG Y V Y +A+ G+ RAQY L + G GV ++
Sbjct: 405 QGSAGGQYALGYLYYNGSGVPKDYGQAADFFRKAAEQGNARAQYGLGSMYYSGDGVPKDI 464
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+A +W+ +AA G A ++ S + GE
Sbjct: 465 GQATKWFRKAAGQGLPEAQHSLSYMAANGE 494
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 51/225 (22%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G R+ G+GV + +A+ + K AA+G+ A MY +DK + A + YR+A
Sbjct: 55 GYRYAKGQGVEHDDAQAVQWYRKAAAQGNVQAEYALAYMYSNGLGVDKDLKQANAWYRKA 114
Query: 164 AVLGDPAGQFNLGISYL------------------------------------------Q 181
A G Q+ +G SY +
Sbjct: 115 AEQGYADAQYAIGYSYANGRGTDVDNEQAVGWYQKSAAQGQAQAQYALGYMYGHGLGVRE 174
Query: 182 EEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
++A+ L + +A+ G AQY L +G G + A WY ++A+ G + Y
Sbjct: 175 DDAIALGWYRKAADQGRADAQYALGYMYDKGLGTAADQSLAIDWYQKSADQGDPQGEYAL 234
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEG 283
Y+ G G+ QA W K++A+ G+A ++GLG F G
Sbjct: 235 GYAYTNGRGVDQDDGQAYSWYKKSAE--QGRADAQYGLGYSFANG 277
>gi|167628951|ref|YP_001679450.1| hypothetical protein HM1_1135 [Heliobacterium modesticaldum Ice1]
gi|167591691|gb|ABZ83439.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 232
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
Query: 157 ISLYRQAAVLGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
+ R A GD + Q+ LG ++ +E +K L QA+ G RAQ L +
Sbjct: 59 VEELRNEAQKGDTSAQYKLGTVLISGDGVTKDADEGLKWLLQAAERGDARAQNNLGVLYF 118
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G G+ N +EA +W+ +AAE GY + Y+ Y G G+PL ++A KWM+ AA+ G+
Sbjct: 119 TGNGLPANGEEAVKWFRKAAEQGYDKGQYHLGYAYLNGVGVPLDAKEALKWMQLAAEQGN 178
Query: 269 GKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAA 303
Q+ E+G+G TE ++ +A + E A G+ A
Sbjct: 179 KDGQIALALMYENGVG--TEKKLDQARAWYERAAAQGDKGA 217
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDP 169
G GV K+ D+ L L+ A RG A + G++Y+ + E A+ +R+AA G
Sbjct: 84 GDGVTKDADEGLKWLLQAAERGDARAQNNLGVLYFTGNGLPANGEEAVKWFRKAAEQGYD 143
Query: 170 AGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
GQ++LG +YL +EA+K + A+ G+ Q LAL G G + L +A
Sbjct: 144 KGQYHLGYAYLNGVGVPLDAKEALKWMQLAAEQGNKDGQIALALMYENGVGTEKKLDQAR 203
Query: 222 RWYLRAA 228
WY RAA
Sbjct: 204 AWYERAA 210
>gi|407781184|ref|ZP_11128404.1| peptidoglycan-binding domain-containing protein [Oceanibaculum
indicum P24]
gi|407208610|gb|EKE78528.1| peptidoglycan-binding domain-containing protein [Oceanibaculum
indicum P24]
Length = 675
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 159 LYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRG 210
L Q A GDP Q +L + Y EA +A+I G AQY L + +G
Sbjct: 398 LVEQRARQGDPEAQHDLAVLYATGDGRPQDMREAAYWFREAAIQGVPGAQYNLGVLYEKG 457
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GV + A WY AAE + RA YN L Y+ G G+P+++ +ARKW++RA+D G
Sbjct: 458 TGVQQDDVRALLWYHSAAERNHPRAQYNLGLFYAQGRGIPVNYAEARKWLRRASDQGMTP 517
Query: 271 AQLEHG 276
A E G
Sbjct: 518 ALFELG 523
>gi|291613675|ref|YP_003523832.1| Sel1 domain protein repeat-containing protein [Sideroxydans
lithotrophicus ES-1]
gi|291583787|gb|ADE11445.1| Sel1 domain protein repeat-containing protein [Sideroxydans
lithotrophicus ES-1]
Length = 317
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 25/264 (9%)
Query: 59 HDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVR 118
HD A + + ++ +++L AA +S P + + + ++ G G+
Sbjct: 56 HDLAHIYENGTGGVSINYSL----AAKWYRESAMQGYAPAQNNLATM-----YERGLGIE 106
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFN 174
K+ +A+ + K A +G ++A + G MY + A+ YR+AA + G N
Sbjct: 107 KDDVQAVMWYRKAAEQGFSIAQQNLGAMYANGRGVVKDDVQAVQWYRKAAESNNANGLQN 166
Query: 175 LGISYLQEEAVK-------LLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
LG Y VK +LY +A+ GH AQ L + GRGV + AA+WYL+
Sbjct: 167 LGWMYANGLGVKRDDAHAVVLYRKAAKLGHAGAQNCLGVMYASGRGVAKDEAVAAQWYLK 226
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTE 282
AA+ G + A N L Y G+G+ QA KW RAA+ G AQ + +G G +
Sbjct: 227 AAKKGDLDAQDNLGLMYIRGQGVARDTAQAYKWFSRAAEHGFANAQRNLGVMYGTGDGVK 286
Query: 283 GEMMKAVVYLELATRAGETAADHV 306
+M KAV + A G A +
Sbjct: 287 QDMKKAVYWYRKAADQGHVEAQEI 310
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+S A K ++++ G+ AQ LA RG G++ + +A WY +AAE G+ A
Sbjct: 68 GVSINYSLAAKWYRESAMQGYAPAQNNLATMYERGLGIEKDDVQAVMWYRKAAEQGFSIA 127
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 291
N Y+ G G+ QA +W ++AA+ + G GL + + AVV
Sbjct: 128 QQNLGAMYANGRGVVKDDVQAVQWYRKAAESNNANGLQNLGWMYANGLGVKRDDAHAVVL 187
Query: 292 LELATRAGETAADHVKNVILQQLSATSRDRAM 323
A + G A + V+ ++D A+
Sbjct: 188 YRKAAKLGHAGAQNCLGVMYASGRGVAKDEAV 219
>gi|189346826|ref|YP_001943355.1| Sel1 domain-containing protein repeat-containing protein
[Chlorobium limicola DSM 245]
gi|189340973|gb|ACD90376.1| Sel1 domain protein repeat-containing protein [Chlorobium limicola
DSM 245]
Length = 341
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 14/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G+GV+++ +A F K A + LA G+MY+ + D EAA + +R+
Sbjct: 157 GLMYYSGQGVKQDYVEAATWFRKAAVQEFALAQNSLGVMYYTGQGVKQDHAEAA-TWFRK 215
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G + LG+ Y ++VK Y +A++ G AQ + + + G+GV+
Sbjct: 216 AAGHGLSVAENKLGLMYYTGQSVKQDYTEAAGWFRKAAVKGLAEAQLNIGMQYYAGQGVN 275
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ EAA WY +AAE G A YN Y G G+ ++AR+W K+A + G+
Sbjct: 276 QDYTEAAGWYRKAAEQGLAEAQYNLGAVYLNGSGITKDEQKAREWYKKACNNGY 329
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 17/191 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+ G+GV+++ +AL + A + A V G+MY+ + D EAA + +R+AA
Sbjct: 52 YYTGQGVKRDYVEALRWYRMAAEQQRAWAQVSLGVMYYTGQGVKQDHAEAA-TWFRKAAE 110
Query: 166 LGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G P G++ LG+ Y + + VK +A+ G AQ +L L + G+GV +
Sbjct: 111 QGLPKGEYYLGVVYEKGQGVKQDHAEAATWFRRAAGQGLAEAQNKLGLMYYSGQGVKQDY 170
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
EAA W+ +AA + A + + Y G+G+ H +A W ++AA GHG + E+ L
Sbjct: 171 VEAATWFRKAAVQEFALAQNSLGVMYYTGQGVKQDHAEAATWFRKAA--GHGLSVAENKL 228
Query: 278 GL-FTEGEMMK 287
GL + G+ +K
Sbjct: 229 GLMYYTGQSVK 239
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 14/182 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G+GV+++ +A F + A +G A GLMY+ + D EAA + +R+
Sbjct: 121 GVVYEKGQGVKQDHAEAATWFRRAAGQGLAEAQNKLGLMYYSGQGVKQDYVEAA-TWFRK 179
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASI------AGH--VRAQYQLALCLHRGRGVD 214
AAV Q +LG+ Y + VK + + AGH A+ +L L + G+ V
Sbjct: 180 AAVQEFALAQNSLGVMYYTGQGVKQDHAEAATWFRKAAGHGLSVAENKLGLMYYTGQSVK 239
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EAA W+ +AA G A N + Y G+G+ + +A W ++AA+ G +AQ
Sbjct: 240 QDYTEAAGWFRKAAVKGLAEAQLNIGMQYYAGQGVNQDYTEAAGWYRKAAEQGLAEAQYN 299
Query: 275 HG 276
G
Sbjct: 300 LG 301
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLH 208
IS ++ A G+ Q LG+ Y + VK Y A+ AQ L + +
Sbjct: 30 ISQLQKEAQQGNAVAQNKLGLLYYTGQGVKRDYVEALRWYRMAAEQQRAWAQVSLGVMYY 89
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G+GV + EAA W+ +AAE G + Y + Y G+G+ H +A W +RAA G
Sbjct: 90 TGQGVKQDHAEAATWFRKAAEQGLPKGEYYLGVVYEKGQGVKQDHAEAATWFRRAAGQGL 149
Query: 269 GKAQLEHGLGLFTEGEMMKAVVYLELAT 296
+AQ + GL ++ G+ +K Y+E AT
Sbjct: 150 AEAQNKLGL-MYYSGQGVKQ-DYVEAAT 175
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 87 VCKSWNDALRPLREAMVLLR-W-----GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V + + +ALR R A R W G + G+GV+++ +A F K A +G
Sbjct: 58 VKRDYVEALRWYRMAAEQQRAWAQVSLGVMYYTGQGVKQDHAEAATWFRKAAEQGLPKGE 117
Query: 141 VDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY------ 189
G++Y + D EAA + +R+AA G Q LG+ Y + VK Y
Sbjct: 118 YYLGVVYEKGQGVKQDHAEAA-TWFRRAAGQGLAEAQNKLGLMYYSGQGVKQDYVEAATW 176
Query: 190 --QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+A++ AQ L + + G+GV + EAA W+ +AA G A L Y G+
Sbjct: 177 FRKAAVQEFALAQNSLGVMYYTGQGVKQDHAEAATWFRKAAGHGLSVAENKLGLMYYTGQ 236
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+ + +A W ++AA G +AQL G+ +
Sbjct: 237 SVKQDYTEAAGWFRKAAVKGLAEAQLNIGMQYY 269
>gi|182417066|ref|ZP_02948444.1| Sel1 repeat family [Clostridium butyricum 5521]
gi|237668948|ref|ZP_04528932.1| Sel1 repeat family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379075|gb|EDT76579.1| Sel1 repeat family [Clostridium butyricum 5521]
gi|237657296|gb|EEP54852.1| Sel1 repeat family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 267
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAA 156
+ + G + G GV ++ K ++ + K A++G+ A + G MY E D KEA
Sbjct: 76 VAMYNLGDMYYCGLGVAQDYCKTIEWYKKAASKGNCNAQCNLGCMYEEGQGIECDYKEA- 134
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLH 208
+ Y +AA+ GD Q+NL Y+ EEA +++ G+ +AQ +
Sbjct: 135 LKWYTEAAIQGDYFAQYNLAGMYMHSKGVEEDCEEAFIWYEKSAKQGYEKAQNTIGYMYE 194
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+G GV + +EA +WY AAE GY A YN + Y G+G+ + A W KR+A H
Sbjct: 195 KGLGVKRDYKEAIKWYKEAAEFGYPYAEYNLAGMYYKGKGVQRNLSSAYSWYKRSA--AH 252
Query: 269 G 269
G
Sbjct: 253 G 253
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEAAISLYRQA 163
G R+ +G V + +A+ + K A G +AM + G MY+ I Y++A
Sbjct: 46 GDRYFNGDTVDTDYKEAVKWYKKAAFSGYDVAMYNLGDMYYCGLGVAQDYCKTIEWYKKA 105
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ Q NLG Y + +EA+K +A+I G AQY LA +GV+
Sbjct: 106 ASKGNCNAQCNLGCMYEEGQGIECDYKEALKWYTEAAIQGDYFAQYNLAGMYMHSKGVEE 165
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +EA WY ++A+ GY +A Y G G+ +++A KW K AA+ G+ A E+
Sbjct: 166 DCEEAFIWYEKSAKQGYEKAQNTIGYMYEKGLGVKRDYKEAIKWYKEAAEFGYPYA--EY 223
Query: 276 GL-GLFTEGE 284
L G++ +G+
Sbjct: 224 NLAGMYYKGK 233
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ RAQ L G VD + +EA +WY +AA GY AMYN Y G G+ +
Sbjct: 37 GNARAQNILGDRYFNGDTVDTDYKEAVKWYKKAAFSGYDVAMYNLGDMYYCGLGVAQDYC 96
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+ +W K+AA G+ AQ G ++ EG+
Sbjct: 97 KTIEWYKKAASKGNCNAQCNLGC-MYEEGQ 125
>gi|432431915|ref|ZP_19674347.1| hypothetical protein A13K_02200 [Escherichia coli KTE187]
gi|432844580|ref|ZP_20077479.1| hypothetical protein A1YS_02219 [Escherichia coli KTE141]
gi|430953464|gb|ELC72362.1| hypothetical protein A13K_02200 [Escherichia coli KTE187]
gi|431394907|gb|ELG78420.1| hypothetical protein A1YS_02219 [Escherichia coli KTE141]
Length = 649
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 331 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 390
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P Q +L G+ E+A K +++ G+ AQY LA GRGVD
Sbjct: 391 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ Q+ W +AE +A Y Y G +P A +K AAD G A L
Sbjct: 451 DYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDMTMAINLLKAAADHGDIDAALVL 510
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
HG + ++ +A+ YL A GE + + ++I Q
Sbjct: 511 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILSMIYYQ 554
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQAAVLGDPAGQFNLGIS 178
K L S+ + A +G+++ D G MY+ E+ KK+ + Y ++A G+ NL +
Sbjct: 310 KKLTSYKRAAQQGNSVFQNDLGAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALM 369
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR-GRGVDFNLQEAARWYLRAAE 229
Y ++A+ L A+ H AQ+ LA C++R G GV+ + ++A +W ++AE
Sbjct: 370 YRDGKGVNKNPQKAISLYLNAANKNHPLAQHSLA-CMYRDGEGVEVDDEQAFKWCQKSAE 428
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GY A Y+ + Y G G+ + ++Q W+ +A+ + KA+ G + E+ + +
Sbjct: 429 QGYAEAQYHLATMYIDGRGVDVDYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDM 488
Query: 290 VYLELATRAGETAADH 305
+A + AADH
Sbjct: 489 T---MAINLLKAAADH 501
>gi|304320118|ref|YP_003853761.1| Sel1-like repeat protein [Parvularcula bermudensis HTCC2503]
gi|303299021|gb|ADM08620.1| Sel1-like repeat protein [Parvularcula bermudensis HTCC2503]
Length = 411
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGD 168
G+GV K+L +A + F A+ G TLA G+MY E + A L AA G+
Sbjct: 102 DGQGVEKDLTRAAEWFNLAASAGHTLAKTRLGIMYAEGLSVPQDPQRAAQLLEAAAEEGN 161
Query: 169 PAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P QF LG YL+ E + Y+ A+ G + Y AL L GR +L EA
Sbjct: 162 PTAQFRLGRLYLEGEGLPTNYRLAAKWFRAAADQGDAESMYNYALLLESGRVGGADLSEA 221
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
W RAAE G + A + L G G+ S ++A KW + +A+ G + + +GL
Sbjct: 222 VVWMRRAAEAGVLPAKVSMGLLAFNGRGMERSDQEALKWFRESANEGSPEGMFLYAVGL- 280
Query: 281 TEGEMMKAVV--YLELATRAGETAADHVKNVILQQLS 315
TEG + L ATRA E + D + +++++
Sbjct: 281 TEGLAGDPQLDEALRWATRAVEASTDEPRQAQIERVA 317
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + +G+GV ++L K + +++ A+ G A G + ++ E A + A
Sbjct: 61 GALYTNGQGVAQDLQKGIGLYVRAASNGQVNAQYALGDLAFDGQGVEKDLTRAAEWFNLA 120
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G + LGI Y + +V Q A+ G+ AQ++L G G+
Sbjct: 121 ASAGHTLAKTRLGIMYAEGLSVPQDPQRAAQLLEAAAEEGNPTAQFRLGRLYLEGEGLPT 180
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N + AA+W+ AA+ G +MYN +L G +A WM+RAA+ G A++
Sbjct: 181 NYRLAAKWFRAAADQGDAESMYNYALLLESGRVGGADLSEAVVWMRRAAEAGVLPAKVSM 240
Query: 276 GLGLFT 281
GL F
Sbjct: 241 GLLAFN 246
>gi|290970124|ref|XP_002668039.1| predicted protein [Naegleria gruberi]
gi|284081105|gb|EFC35295.1| predicted protein [Naegleria gruberi]
Length = 296
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
L G R+K+G G+ ++ +KA + K + A G++Y + + A +
Sbjct: 40 LHLGLRYKNGEGIEQSNEKAFEWIEKAVEQDYAQAQNHLGILYLKGKGIYQSYDKACECF 99
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA + Q+NLG+ Y E+A + +++ H++AQ +L + + G+G
Sbjct: 100 QKAANQNNKCAQYNLGLRYKNGQGIEQSYEKAFEFFQKSANQDHIQAQTELGIMFYHGQG 159
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V+ +L++A W+ ++A GY +A L Y+ G G+ LS+ +A +W +++A G +AQ
Sbjct: 160 VEQSLEKAFEWFEKSAVQGYAQAQSYLGLLYAKGHGIKLSYEKACEWCQKSAIQGIPEAQ 219
Query: 273 LEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 304
G L+ G+ + A ++E+A G T A
Sbjct: 220 FLLG-NLYYCGKGVAKSKENAFYWMEMAAVKGYTQAQ 255
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q LG+ E++++LLY+++ G V +Q L L G G++ + ++A W +A E
Sbjct: 11 QKGLGVPISNEKSLQLLYESASHGFVHSQLHLGLRYKNGEGIEQSNEKAFEWIEKAVEQD 70
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y +A + + Y G+G+ S+ +A + ++AA+ + AQ GL
Sbjct: 71 YAQAQNHLGILYLKGKGIYQSYDKACECFQKAANQNNKCAQYNLGL 116
>gi|30248264|ref|NP_840334.1| hypothetical protein NE0240 [Nitrosomonas europaea ATCC 19718]
gi|30180149|emb|CAD84151.1| hypothetical protein NE0240 [Nitrosomonas europaea ATCC 19718]
Length = 1032
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAA 156
AMV L G+ +++G GV +N++KA+ + K +G + AM L Y + +D+ A
Sbjct: 775 AMVFL--GRCYQYGEGVNQNINKAIALYQKATDKGDSTAMTCLALCYQDGKGVDQDWNKA 832
Query: 157 ISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLH 208
I+LY+QA D + LG Y + A++L A+ G+ A L
Sbjct: 833 INLYQQAVKKNDCTAMYYLGACYENGYGVKQNRSSAIELYRMAANQGNSNAMVNLGFYYR 892
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GV N +EA + + RAA+ G RAM N +CY GEG+ +A ++A G
Sbjct: 893 NGIGVKQNRKEAVKLFQRAAKVGDYRAMCNLGVCYENGEGVDQDWNKAISLYQQATKAGE 952
Query: 269 GKA 271
+A
Sbjct: 953 IRA 955
Score = 70.9 bits (172), Expect = 8e-10, Method: Composition-based stats.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
++ G GV +N +KA+ F + S AMV+ G+ Y + + AA L+++A L
Sbjct: 639 YQQGLGVVRNPEKAIYWFQMAVNKKSDTAMVNLGICYQKGEGVKQNLNAAFKLFQRAVKL 698
Query: 167 GDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
+ F LG+ Y + E VK L QA+ G+ A L LC GV +L
Sbjct: 699 DNSTAMFYLGLCYQRSEGVKEDLNEAFALYQQAADKGNSTATAYLGLCYQYEVGVKQDLD 758
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+A Y RA + G AM CY +GEG+ + +A ++A D G A
Sbjct: 759 KAISQYQRAVDEGNSLAMVFLGRCYQYGEGVNQNINKAIALYQKATDKGDSTA 811
Score = 67.8 bits (164), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ G+GV ++ +KA++ + + + AM G Y + +AI LYR AA
Sbjct: 819 YQDGKGVDQDWNKAINLYQQAVKKNDCTAMYYLGACYENGYGVKQNRSSAIELYRMAANQ 878
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ NLG Y ++EAVKL +A+ G RA L +C G GVD +
Sbjct: 879 GNSNAMVNLGFYYRNGIGVKQNRKEAVKLFQRAAKVGDYRAMCNLGVCYENGEGVDQDWN 938
Query: 219 EAARWYLRAAEGGYVRAMYN 238
+A Y +A + G +RA+ N
Sbjct: 939 KAISLYQQATKAGEIRAISN 958
Score = 67.4 bits (163), Expect = 9e-09, Method: Composition-based stats.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKE-- 154
L + + G ++ GV+++L++A + + A +G++ A GL Y +E+ K+
Sbjct: 698 LDNSTAMFYLGLCYQRSEGVKEDLNEAFALYQQAADKGNSTATAYLGLCYQYEVGVKQDL 757
Query: 155 -AAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLAL 205
AIS Y++A G+ LG Y E A+ L +A+ G A LAL
Sbjct: 758 DKAISQYQRAVDEGNSLAMVFLGRCYQYGEGVNQNINKAIALYQKATDKGDSTAMTCLAL 817
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
C G+GVD + +A Y +A + AMY CY G G+ + A + + AA+
Sbjct: 818 CYQDGKGVDQDWNKAINLYQQAVKKNDCTAMYYLGACYENGYGVKQNRSSAIELYRMAAN 877
Query: 266 CGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
G+ A + G G+ + +AV + A + G+ A
Sbjct: 878 QGNSNAMVNLGFYYRNGIGVKQNRKEAVKLFQRAAKVGDYRA 919
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-KE---AA 156
AMV L G ++ G GV++NL+ A F + ++ AM GL Y + KE A
Sbjct: 667 AMVNL--GICYQKGEGVKQNLNAAFKLFQRAVKLDNSTAMFYLGLCYQRSEGVKEDLNEA 724
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ--------LALCLH 208
+LY+QAA G+ LG+ Y E VK +I+ + RA + L C
Sbjct: 725 FALYQQAADKGNSTATAYLGLCYQYEVGVKQDLDKAISQYQRAVDEGNSLAMVFLGRCYQ 784
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA---D 265
G GV+ N+ +A Y +A + G AM +LCY G+G+ +A ++A D
Sbjct: 785 YGEGVNQNINKAIALYQKATDKGDSTAMTCLALCYQDGKGVDQDWNKAINLYQQAVKKND 844
Query: 266 C 266
C
Sbjct: 845 C 845
Score = 45.1 bits (105), Expect = 0.044, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 46/106 (43%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q LG+ E+A+ A A L +C +G GV NL A + + RA +
Sbjct: 640 QQGLGVVRNPEKAIYWFQMAVNKKSDTAMVNLGICYQKGEGVKQNLNAAFKLFQRAVKLD 699
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
AM+ LCY EG+ +A ++AAD G+ A GL
Sbjct: 700 NSTAMFYLGLCYQRSEGVKEDLNEAFALYQQAADKGNSTATAYLGL 745
Score = 38.9 bits (89), Expect = 3.8, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 3/119 (2%)
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
L R A + G+ NL I + + L A+ +V A L +G GV N +
Sbjct: 594 LARVAVFISYELGRRNLTIPH---NIIIALEHAANLSNVIAMDYLGFFYQQGLGVVRNPE 650
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A W+ A AM N +CY GEG+ + A K +RA + A GL
Sbjct: 651 KAIYWFQMAVNKKSDTAMVNLGICYQKGEGVKQNLNAAFKLFQRAVKLDNSTAMFYLGL 709
>gi|334131555|ref|ZP_08505317.1| hypothetical protein METUNv1_02379 [Methyloversatilis universalis
FAM5]
gi|333443028|gb|EGK70993.1| hypothetical protein METUNv1_02379 [Methyloversatilis universalis
FAM5]
Length = 286
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
R A GDP Q++ G+ Q E+++ L +A+ GHVRAQY+LAL GR
Sbjct: 96 RARAHTGDPEAQYSYGMMLSQGGSGKAEDLAESIRWLERAAEQGHVRAQYELALAYKLGR 155
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
G + A RW++ AA G+V A Y+ + GEG+P +A W RAA GHG A
Sbjct: 156 GTLQDYPAAGRWFMAAARNGHVGAQYHMGRLHRIGEGVPADLIRAYAWFNRAAAQGHGAA 215
Query: 272 Q 272
+
Sbjct: 216 R 216
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 195 GHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
G AQY + L +G G +L E+ RW RAAE G+VRA Y +L Y G G +
Sbjct: 102 GDPEAQYSYGMMLSQGGSGKAEDLAESIRWLERAAEQGHVRAQYELALAYKLGRGTLQDY 161
Query: 254 RQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNV 309
A +W AA GH AQ H +G ++++A + A G AA ++
Sbjct: 162 PAAGRWFMAAARNGHVGAQYHMGRLHRIGEGVPADLIRAYAWFNRAAAQGHGAARGARDE 221
Query: 310 ILQQL 314
I L
Sbjct: 222 IAASL 226
>gi|126640192|ref|YP_001083176.1| signal peptide [Acinetobacter baumannii ATCC 17978]
Length = 183
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDP 169
+GV KN ++A GS A G+MY+ E D K A + +AA G
Sbjct: 7 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRA-FEYFAKAADKGHA 65
Query: 170 AGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NLG+ Y + E+A + +A+ G+ A+Y LA +G GV + ++A
Sbjct: 66 KAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQAL 125
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+WY +AAE A YN + Y GEG P + + A+KW ++AAD G A+
Sbjct: 126 KWYTKAAEHNESDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAGDSDAK 176
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ L +GV N ++A +W A + G V A Y+ + Y G G+ ++A ++ +AA
Sbjct: 1 MLLTGEQGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAA 60
Query: 265 DCGHGKAQLEHGLGLFTEGE 284
D GH KAQ G+ L+ GE
Sbjct: 61 DKGHAKAQYNLGV-LYDRGE 79
>gi|328771981|gb|EGF82020.1| hypothetical protein BATDEDRAFT_10115 [Batrachochytrium
dendrobatidis JAM81]
Length = 562
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE 154
L E++ + ++ G GV K+L A+ + K A G+ A G M+ E +++ +
Sbjct: 170 LGESVSMYNVAHCYEEGVGVAKDLTLAIHWYRKSAECGNCYAQNSLGYMHEEGHGVERSD 229
Query: 155 A-AISLYRQAAVLGDPAGQFNLGISY---LQEEAVKLL-----YQASIAGHVRAQYQLAL 205
A A+ Y+ +A G P Q NLG + + ++L ++A++ GH RAQ+ L
Sbjct: 230 ADAVKWYKLSAEQGYPWAQCNLGFCLQNGIGTDRNEILGSYWYHKAAVQGHSRAQHNLGH 289
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G GV+ N A +WY R+A G AM++ CY +G G+ + A AA
Sbjct: 290 AYQYGIGVEQNEALAVQWYQRSASSGNSYAMHSLGYCYQYGIGVDIDESMALTLYHEAAK 349
Query: 266 CGHGKAQLEHG 276
GHG AQL G
Sbjct: 350 LGHGPAQLSLG 360
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 16/212 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G +++G GV +N A+ + + A+ G++ AM G Y +D E+ A++LY +A
Sbjct: 288 GHAYQYGIGVEQNEALAVQWYQRSASSGNSYAMHSLGYCYQYGIGVDIDESMALTLYHEA 347
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A LG Q +LG Y ++EA K + ++ + AQ L G G
Sbjct: 348 AKLGHGPAQLSLGCCYRSGIGAKVDEKEAFKWIQLSAEGNNALAQNTLGHLYEDGIGTAA 407
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE- 274
N++ A WY ++AE V A+ N ++ YS G G+P + +A + ++ AAD H +AQ
Sbjct: 408 NIERAVFWYTQSAEQNNVWALTNLAILYSDGNGVPQNDTEAVRLLRLAADQNHVRAQTRL 467
Query: 275 ---HGLGLFTEGEMMKAVVYLELATRAGETAA 303
+G +++A+ + E A G +A
Sbjct: 468 ADMLAVGRGCTANLVQALAWYEKAADQGSVSA 499
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 159 LYRQAAVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRG 210
L + A + P+G + LG+ Y E+AV ++++ H R L C G
Sbjct: 91 LVKAADIDNHPSGNYALGVCYHDGIGVPKCAEKAVYYYKRSAVFNHPRGLGILGFCYGEG 150
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GV NL+ A ++YLRAA G +MYN + CY G G+ A W +++A+CG+
Sbjct: 151 YGVPKNLEVAFQYYLRAATLGESVSMYNVAHCYEEGVGVAKDLTLAIHWYRKSAECGNCY 210
Query: 271 AQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
AQ G + EG ++ AV + +L+ G A LQ T R+ +
Sbjct: 211 AQNSLGY-MHEEGHGVERSDADAVKWYKLSAEQGYPWAQCNLGFCLQNGIGTDRNEIL 267
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G G N+++A+ + + A + + A+ + ++Y + +
Sbjct: 396 GHLYEDGIGTAANIERAVFWYTQSAEQNNVWALTNLAILYSDGN---------------- 439
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ EAV+LL A+ HVRAQ +LA L GRG NL +A WY +A
Sbjct: 440 --------GVPQNDTEAVRLLRLAADQNHVRAQTRLADMLAVGRGCTANLVQALAWYEKA 491
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
A+ G V AM + Y G G ++ +W ++AA G
Sbjct: 492 ADQGSVSAMGIVARYYEEGLGCISDIAKSIEWYEKAASWG 531
>gi|149191236|ref|ZP_01869492.1| Sel1-like repeat [Vibrio shilonii AK1]
gi|148834906|gb|EDL51887.1| Sel1-like repeat [Vibrio shilonii AK1]
Length = 259
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R+ G GV++N KA++ + K A +GS AM G+MY D KEAA S + +
Sbjct: 50 GDRYADGNGVKENDAKAVEWYHKAAKQGSESAMYKLGMMYDNGHGVNYDAKEAA-SWFEK 108
Query: 163 AAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A+ G Q+ L G+ +AV+ A+ AQ L + +G GV+
Sbjct: 109 ASQKGSVQAQYYLAGMYKWGRGVPKSNSKAVEYYQLAAERNFDVAQNSLGVMYAKGLGVE 168
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-L 273
+ EA +WY +AAE GY N + YS GEG+ L++ +A W A+ G+ A+ L
Sbjct: 169 RDDLEAVKWYRKAAENGYAYGQRNLAYKYSLGEGVELNNVEAYAWASVASTNGYATAEKL 228
Query: 274 EHGLGLFTEGEMM-----KAVVYLE 293
L L + + KA +YLE
Sbjct: 229 RDDLALKLNADELQQAQQKAKLYLE 253
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 143 AGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY-----LQE---EAVKLLYQASIA 194
AG + + D A++ Q A GD Q LG Y ++E +AV+ ++A+
Sbjct: 17 AGSLAFVKDWSTASVKKVEQGAKQGDLFAQIELGDRYADGNGVKENDAKAVEWYHKAAKQ 76
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G A Y+L + G GV+++ +EAA W+ +A++ G V+A Y + Y +G G+P S+
Sbjct: 77 GSESAMYKLGMMYDNGHGVNYDAKEAASWFEKASQKGSVQAQYYLAGMYKWGRGVPKSNS 136
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG 299
+A ++ + AA+ AQ G+ GL E + ++AV + A G
Sbjct: 137 KAVEYYQLAAERNFDVAQNSLGVMYAKGLGVERDDLEAVKWYRKAAENG 185
>gi|424741556|ref|ZP_18169901.1| Sel1 repeat protein [Acinetobacter baumannii WC-141]
gi|422944740|gb|EKU39723.1| Sel1 repeat protein [Acinetobacter baumannii WC-141]
Length = 266
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA+ L G+++ G+ V++N KAL+ F K + +G A D G MY+E +
Sbjct: 39 EALRLYEEGQKYFLGKDVKQNYQKALELFQKASDQGLAEAQNDLGGMYFEGLGTTQDYQK 98
Query: 156 AISLYRQAAVLGDPAGQFNLGISY-----LQEE---AVKLLYQASIAGHVRAQYQLALCL 207
A + AA A Q+NLG+ Y +Q++ A++L ++ G+ +AQY L
Sbjct: 99 AFKYFDSAANQKLAAAQYNLGLMYDKGLYIQKDRKKALELYELSTEQGYAKAQYNLGNAY 158
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV N ++A + +AAE +A YN Y+ GEG+ +++A ++ +AA G
Sbjct: 159 ANGDGVPQNNKKALELFSKAAEQNLPQASYNLGNMYADGEGVTQDNKKALEYFTKAAQQG 218
Query: 268 HGKAQ 272
+AQ
Sbjct: 219 FPQAQ 223
>gi|251780387|ref|ZP_04823307.1| Sel1 repeat family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084702|gb|EES50592.1| Sel1 repeat family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 269
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV ++ +KA + F A++G+ A + MY E E AI Y +A
Sbjct: 81 GDMYYCGNGVDQDYEKAKEYFEYSASQGNPDAQCNLACMYEEGLGTEINYEEAIKWYEKA 140
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A+ D Q+NLG Y+ + V + Y+ ASI G+ ++Q L +G G++
Sbjct: 141 ALQEDFYAQYNLGNLYMYGKGVDIDYKKAFKWHMKASILGYEKSQNTLGYMYEQGLGIEK 200
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
N +EA ++Y +AA Y A YN + Y G G+ + A W ++AA+ G KA
Sbjct: 201 NYKEAVKYYKKAAYQEYSYAEYNLATMYYLGNGIIQDRKTAYIWYQKAANQGLKKA 256
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 16/166 (9%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLAL 205
E A+ Y ++A G Q+NLG Y E+A + ++ G+ AQ LA
Sbjct: 59 EEAVKWYIKSAEQGYDVAQYNLGDMYYCGNGVDQDYEKAKEYFEYSASQGNPDAQCNLAC 118
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G G + N +EA +WY +AA A YN Y +G+G+ + +++A KW +A+
Sbjct: 119 MYEEGLGTEINYEEAIKWYEKAALQEDFYAQYNLGNLYMYGKGVDIDYKKAFKWHMKASI 178
Query: 266 CGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 305
G+ K+Q E GLG+ E +AV Y + A + A++
Sbjct: 179 LGYEKSQNTLGYMYEQGLGI--EKNYKEAVKYYKKAAYQEYSYAEY 222
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
+AQ L + G + + +EA +WY+++AE GY A YN Y G G+ + +A+
Sbjct: 39 KAQNALGDKYYIGDDITQDYEEAVKWYIKSAEQGYDVAQYNLGDMYYCGNGVDQDYEKAK 98
Query: 258 KWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELA 295
++ + +A G+ AQ E GLG TE +A+ + E A
Sbjct: 99 EYFEYSASQGNPDAQCNLACMYEEGLG--TEINYEEAIKWYEKA 140
>gi|416337635|ref|ZP_11673998.1| hypothetical protein EcoM_03448 [Escherichia coli WV_060327]
gi|320194527|gb|EFW69158.1| hypothetical protein EcoM_03448 [Escherichia coli WV_060327]
Length = 649
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 331 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 390
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P Q +L G+ E+A K +++ G+ AQY LA GRGVD
Sbjct: 391 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ Q+ W +AE +A Y Y G +P A +K AAD G A L
Sbjct: 451 DYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDMTMAINLLKAAADHGDIDAALVL 510
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 511 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 554
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQAAVLGDPAGQFNLGIS 178
K L S+ + A +G+++ D G MY+ E+ KK+ + Y ++A G+ NL +
Sbjct: 310 KKLTSYKRAAQQGNSVFQNDLGAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALM 369
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR-GRGVDFNLQEAARWYLRAAE 229
Y ++A+ L A+ H AQ+ LA C++R G GV+ + ++A +W ++AE
Sbjct: 370 YRDGKGVNKNPQKAISLYLNAANKNHPLAQHSLA-CMYRDGEGVEVDDEQAFKWCQKSAE 428
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GY A Y+ + Y G G+ + ++Q W+ +A+ + KA+ G + E+ + +
Sbjct: 429 QGYAEAQYHLATMYIDGRGVDVDYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDM 488
Query: 290 VYLELATRAGETAADH 305
+A + AADH
Sbjct: 489 T---MAINLLKAAADH 501
>gi|334343014|ref|YP_004555618.1| Sel1 domain-containing protein repeat-containing protein
[Sphingobium chlorophenolicum L-1]
gi|334103689|gb|AEG51112.1| Sel1 domain protein repeat-containing protein [Sphingobium
chlorophenolicum L-1]
Length = 261
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCL 207
A+ LY+ A GDP Q +LG YL+ + A+K +A+ G AQY L
Sbjct: 61 AMRLYQSLADDGDPRAQNSLGRMYLRGQGTGRDYKAAMKWFRRAAALGVADAQYNLGEIY 120
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
R GVD +L EAARWY RAAE G+V A + ++ Y G+G+ S +A W +RAA G
Sbjct: 121 LREFGVDQDLVEAARWYTRAAEQGHVGAQFTLAVLYMIGQGVSRSPLKAVYWFERAASQG 180
Query: 268 HGKAQLEHGL 277
+AQ++ G+
Sbjct: 181 SAEAQVQLGI 190
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLAL 205
+AA+ +R+AA LG Q+NLG YL+E EA + +A+ GHV AQ+ LA+
Sbjct: 95 KAAMKWFRRAAALGVADAQYNLGEIYLREFGVDQDLVEAARWYTRAAEQGHVGAQFTLAV 154
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
G+GV + +A W+ RAA G A + Y G+G+ A KW
Sbjct: 155 LYMIGQGVSRSPLKAVYWFERAASQGSAEAQVQLGIIYGAGQGVARDSVVAYKWF 209
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ + G+G ++ A+ F + AA G A + G +Y + D EAA Y +
Sbjct: 81 GRMYLRGQGTGRDYKAAMKWFRRAAALGVADAQYNLGEIYLREFGVDQDLVEAA-RWYTR 139
Query: 163 AAVLGDPAGQFNLGISYLQEEAV-----KLLY---QASIAGHVRAQYQLALCLHRGRGVD 214
AA G QF L + Y+ + V K +Y +A+ G AQ QL + G+GV
Sbjct: 140 AAEQGHVGAQFTLAVLYMIGQGVSRSPLKAVYWFERAASQGSAEAQVQLGIIYGAGQGVA 199
Query: 215 FNLQEAARWY 224
+ A +W+
Sbjct: 200 RDSVVAYKWF 209
>gi|323450500|gb|EGB06381.1| hypothetical protein AURANDRAFT_54293 [Aureococcus anophagefferens]
Length = 240
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 34/204 (16%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-----EEAVKLLYQASIAGHVRAQYQL 203
++DKK+A LYR AA G+ Q NLG ++L EEA + A+ G+ ++ L
Sbjct: 9 KLDKKKAE-RLYRAAADRGEATAQCNLG-AFLHSDEKFEEAFRYFVLAANQGYTPGEFNL 66
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAA---------------------------EGGYVRAM 236
C RG+G + +L +A W+ RAA E G V AM
Sbjct: 67 GCCYQRGKGTELDLGKARYWFERAAAKGDEDAIDELARLDARKAAKIYRRAVELGDVDAM 126
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELAT 296
N L Y G G+ L ++A + + AAD GH AQ G L++E + +A Y LA
Sbjct: 127 INLGLLYRTGSGVKLDKKKAERLYRAAADRGHAVAQCNQGNLLYSEKKFEEAFRYYALAA 186
Query: 297 RAGETAADHVKNVILQQLSATSRD 320
G T A++ + + T D
Sbjct: 187 DQGHTKAEYNLGICYRDGEGTEVD 210
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+G +L KA F + AA+G A+ + +D ++AA +YR+A LGD
Sbjct: 70 YQRGKGTELDLGKARYWFERAAAKGDEDAIDELA----RLDARKAA-KIYRRAVELGDVD 124
Query: 171 GQFNLGISYLQEEAVKL-------LYQASIA-GHVRAQYQLALCLHRGRGVDFNLQEAAR 222
NLG+ Y VKL LY+A+ GH AQ L+ + +EA R
Sbjct: 125 AMINLGLLYRTGSGVKLDKKKAERLYRAAADRGHAVAQCNQGNLLYSEK----KFEEAFR 180
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+Y AA+ G+ +A YN +CY GEG + +AR W +RAA GH KA
Sbjct: 181 YYALAADQGHTKAEYNLGICYRDGEGTEVDLGKARYWFERAAAKGHEKA 229
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Query: 135 GSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLG-ISYLQ---EEAV 185
G AM++ GL+Y ++DKK+A LYR AA G Q N G + Y + EEA
Sbjct: 121 GDVDAMINLGLLYRTGSGVKLDKKKAE-RLYRAAADRGHAVAQCNQGNLLYSEKKFEEAF 179
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+ A+ GH +A+Y L +C G G + +L +A W+ RAA G+ +A+
Sbjct: 180 RYYALAADQGHTKAEYNLGICYRDGEGTEVDLGKARYWFERAAAKGHEKAI 230
>gi|126738261|ref|ZP_01753982.1| Sel1-like repeat protein [Roseobacter sp. SK209-2-6]
gi|126720758|gb|EBA17463.1| Sel1-like repeat protein [Roseobacter sp. SK209-2-6]
Length = 782
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G+GV ++ +A+ F A +G +A G MY + A++ YR+A
Sbjct: 522 GIIYRNGQGVSQSDSEAVRWFRFAANQGYPVAETQLGWMYEKGRAVPQSDTQAVAWYRKA 581
Query: 164 AVLGDPAGQFNLGISYLQ-------EEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDF 215
A P GQ+NLG Y ++ + Y +A+ + H AQY+L + GRG
Sbjct: 582 ANHDHPRGQYNLGWMYENGRGVAENDDTARFWYNKAARSDHAAAQYRLGVMFQEGRGGTQ 641
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N EAA+W RAA+ + RA Y G+G+ S QA W +RAA + A L
Sbjct: 642 NDTEAAQWLRRAADQQHARAQTYLGWMYERGKGVTQSDSQALAWYRRAAALDNPSANLN- 700
Query: 276 GLGLFTE 282
LG+F E
Sbjct: 701 -LGVFYE 706
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 160 YRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
YR AA GDP Q NLGI Y EAV+ A+ G+ A+ QL +GR
Sbjct: 506 YRIAAGAGDPTAQTNLGIIYRNGQGVSQSDSEAVRWFRFAANQGYPVAETQLGWMYEKGR 565
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
V + +A WY +AA + R YN Y G G+ + AR W +AA H A
Sbjct: 566 AVPQSDTQAVAWYRKAANHDHPRGQYNLGWMYENGRGVAENDDTARFWYNKAARSDHAAA 625
Query: 272 QLEHGLGLFTEG 283
Q G+ +F EG
Sbjct: 626 QYRLGV-MFQEG 636
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 132 AARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ------ 181
A G A + G++Y A+ +R AA G P + LG Y +
Sbjct: 510 AGAGDPTAQTNLGIIYRNGQGVSQSDSEAVRWFRFAANQGYPVAETQLGWMYEKGRAVPQ 569
Query: 182 --EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+AV +A+ H R QY L GRGV N A WY +AA + A Y
Sbjct: 570 SDTQAVAWYRKAANHDHPRGQYNLGWMYENGRGVAENDDTARFWYNKAARSDHAAAQYRL 629
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ + G G + +A +W++RAAD H +AQ
Sbjct: 630 GVMFQEGRGGTQNDTEAAQWLRRAADQQHARAQ 662
>gi|237748172|ref|ZP_04578652.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379534|gb|EEO29625.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 537
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ F+ G GV+++ KA + K A +G +A G++Y E D +AA +L
Sbjct: 162 GEMFEAGEGVKRDYKKAAFWYKKAADKGHLMAATKLGILYMEGRGVKQDDAKAA-ALLSH 220
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG+ Y + A++ +A++ G+ +AQ+ L G GV+
Sbjct: 221 AAKRGIALAQSNLGVLYASGRGVESSPKRALEWYKKAAVQGNSQAQFSLGNMYEDGSGVE 280
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
NL AA WY ++AE G A N Y G +A W RAAD G+ +AQ
Sbjct: 281 KNLAVAAAWYQKSAEQGNAEAQNNLGRLYMEGGEFEGREDEAFMWFSRAADQGYAEAQTN 340
Query: 275 HGL----GLFTEGEMMKAVVYLELATRAGET 301
G+ GL + ++ KA + + A G+
Sbjct: 341 LGVLYSYGLGVDKDLSKAFYWYQQAAEKGQA 371
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 18/245 (7%)
Query: 55 STEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG 114
+ +GH A+ +L +AA+L+ + A R + A+ G + G
Sbjct: 186 ADKGHLMAATKLGILYMEGRGVKQDDAKAAALLSHA---AKRGI--ALAQSNLGVLYASG 240
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQAAVLGDPA 170
RGV + +AL+ + K A +G++ A G MY + E +++ Y+++A G+
Sbjct: 241 RGVESSPKRALEWYKKAAVQGNSQAQFSLGNMYEDGSGVEKNLAVAAAWYQKSAEQGNAE 300
Query: 171 GQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NLG Y++ +EA +A+ G+ AQ L + G GVD +L +A
Sbjct: 301 AQNNLGRLYMEGGEFEGREDEAFMWFSRAADQGYAEAQTNLGVLYSYGLGVDKDLSKAFY 360
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
WY +AAE G + + Y GEG+ +QA W ++AA G ++Q GL + T
Sbjct: 361 WYQQAAEKGQAEGAFFLAEAYYKGEGVHRDDKQAVFWYQKAAKLGVPESQDRLGL-MLTN 419
Query: 283 GEMMK 287
G +K
Sbjct: 420 GVGVK 424
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G GV K+L KA + + A +G Y++ + + A+ Y++A
Sbjct: 342 GVLYSYGLGVDKDLSKAFYWYQQAAEKGQAEGAFFLAEAYYKGEGVHRDDKQAVFWYQKA 401
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A LG P Q LG+ VK Y+ + + G+ +Q L + RG GV+
Sbjct: 402 AKLGVPESQDRLGLMLTNGVGVKQDYKQAYSWFRKAARQGYAESQNNLGVLYARGLGVEK 461
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ ++A WY +A +A +N Y G G+ +QAR W +AA G +AQ
Sbjct: 462 DYKQAVAWYRKAVMQNLPQAQFNLGTMYLQGHGVKQDVKQARHWFTKAAAQGLPEAQ 518
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G+ + G D+A F + A +G A + G++Y +DK A Y+QA
Sbjct: 306 GRLYMEGGEFEGREDEAFMWFSRAADQGYAEAQTNLGVLYSYGLGVDKDLSKAFYWYQQA 365
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
A G G F L +Y + E V YQ A+ G +Q +L L L G GV
Sbjct: 366 AEKGQAEGAFFLAEAYYKGEGVHRDDKQAVFWYQKAAKLGVPESQDRLGLMLTNGVGVKQ 425
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A W+ +AA GY + N + Y+ G G+ ++QA W ++A +AQ
Sbjct: 426 DYKQAYSWFRKAARQGYAESQNNLGVLYARGLGVEKDYKQAVAWYRKAVMQNLPQAQFNL 485
Query: 276 GLGLFTEGEMMKAVV 290
G ++ +G +K V
Sbjct: 486 GT-MYLQGHGVKQDV 499
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 170 AGQFNLGISYLQ----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
A ++ G+ + Q E+A +A+ G+ AQ LA + G GV+ + AA WY
Sbjct: 88 ANDYSDGMQFYQDKDYEKAFSSFQKAADKGNAAAQSALAALYYNGEGVEEDEAAAALWYS 147
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 285
RAAE G A + + GEG+ +++A W K+AAD GH A + G+ L+ EG
Sbjct: 148 RAAEHGRTDAQFALGEMFEAGEGVKRDYKKAAFWYKKAADKGHLMAATKLGI-LYMEGRG 206
Query: 286 MK 287
+K
Sbjct: 207 VK 208
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 31/209 (14%)
Query: 101 AMVLLRWGKRFKHGRGVRKNL----DKALDSFLKGAARGSTLAMVDA------------- 143
+M L R G F GRG + N+ DK +D L G R TLA+V
Sbjct: 37 SMSLFRGG--FFSGRGAQGNVVMPRDK-MDWNL-GRVRQGTLAVVGCLFLANAAWANDYS 92
Query: 144 -GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL------QEEAVKLLYQASIAGH 196
G+ +++ E A S +++AA G+ A Q L Y ++EA L+ + A H
Sbjct: 93 DGMQFYQDKDYEKAFSSFQKAADKGNAAAQSALAALYYNGEGVEEDEAAAALWYSRAAEH 152
Query: 197 VR--AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
R AQ+ L G GV + ++AA WY +AA+ G++ A + Y G G+
Sbjct: 153 GRTDAQFALGEMFEAGEGVKRDYKKAAFWYKKAADKGHLMAATKLGILYMEGRGVKQDDA 212
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEG 283
+A + AA G AQ G+ L+ G
Sbjct: 213 KAAALLSHAAKRGIALAQSNLGV-LYASG 240
>gi|42526681|ref|NP_971779.1| hypothetical protein TDE1171 [Treponema denticola ATCC 35405]
gi|41816874|gb|AAS11660.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
Length = 267
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDP 169
G G+ + +A + K A +G+ A GLMY D K+ A +++AA G
Sbjct: 84 GDGIPIDKKQAFYWYTKAAEQGNVAAQCILGLMYSNGDGTPVDKKQAFYWFKKAAEQGYA 143
Query: 170 AGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
QFNLG Y + ++A +A+ G+ AQ+ LAL + G G+ + ++A
Sbjct: 144 KAQFNLGGMYYKGNGILTDKKQAFYWFKKAAEQGYAEAQFNLALMYYNGDGILADKKQAF 203
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
WY ++AE G A +N L YS G+G+ +QA W+K+A + G+
Sbjct: 204 YWYTKSAEKGLAFAQFNLGLMYSNGDGILADKKQAAYWIKQAYENGY 250
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+ AA GD QFNL Y + ++AV +A+ G+ AQ LA G G
Sbjct: 27 KAAAEQGDAFAQFNLAAMYDKGDESLVDKKQAVYWYTKAAEQGYDVAQLFLAFMYDIGDG 86
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ + ++A WY +AAE G V A L YS G+G P+ +QA W K+AA+ G+ KAQ
Sbjct: 87 IPIDKKQAFYWYTKAAEQGNVAAQCILGLMYSNGDGTPVDKKQAFYWFKKAAEQGYAKAQ 146
Query: 273 LEHGLGLFTEG 283
G G++ +G
Sbjct: 147 FNLG-GMYYKG 156
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 17/187 (9%)
Query: 113 HGRGVRKNLDK--ALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G +DK A+ + K A +G +A + MY +DKK+A Y +AA
Sbjct: 45 YDKGDESLVDKKQAVYWYTKAAEQGYDVAQLFLAFMYDIGDGIPIDKKQA-FYWYTKAAE 103
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G+ A Q LG+ Y +++A +A+ G+ +AQ+ L ++G G+ +
Sbjct: 104 QGNVAAQCILGLMYSNGDGTPVDKKQAFYWFKKAAEQGYAKAQFNLGGMYYKGNGILTDK 163
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A W+ +AAE GY A +N +L Y G+G+ +QA W ++A+ G AQ GL
Sbjct: 164 KQAFYWFKKAAEQGYAEAQFNLALMYYNGDGILADKKQAFYWYTKSAEKGLAFAQFNLGL 223
Query: 278 GLFTEGE 284
+++ G+
Sbjct: 224 -MYSNGD 229
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAGQFNL-- 175
DK + A +G A + MY + D+ K+ A+ Y +AA G Q L
Sbjct: 20 DKKFEKVKAAAEQGDAFAQFNLAAMYDKGDESLVDKKQAVYWYTKAAEQGYDVAQLFLAF 79
Query: 176 ------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
GI +++A +A+ G+V AQ L L G G + ++A W+ +AAE
Sbjct: 80 MYDIGDGIPIDKKQAFYWYTKAAEQGNVAAQCILGLMYSNGDGTPVDKKQAFYWFKKAAE 139
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
GY +A +N Y G G+ +QA W K+AA+ G+ +AQ L
Sbjct: 140 QGYAKAQFNLGGMYYKGNGILTDKKQAFYWFKKAAEQGYAEAQFNLAL 187
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G AQ+ LA +G + ++A WY +AAE GY A + Y G+G+P
Sbjct: 29 AAEQGDAFAQFNLAAMYDKGDESLVDKKQAVYWYTKAAEQGYDVAQLFLAFMYDIGDGIP 88
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+ +QA W +AA+ G+ AQ GL +++ G+
Sbjct: 89 IDKKQAFYWYTKAAEQGNVAAQCILGL-MYSNGD 121
>gi|168333375|ref|ZP_02691655.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 439
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA------AISLYR 161
GK + G G+RK+ K++ F K A + + + + G+ Y ++ K A ++
Sbjct: 22 GKYYGSGDGIRKDYVKSMAWFKKAAEQEHSNSQYEIGIYY--LNGKGVTKNLGRAFEWFK 79
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
++A + G++ LGI Y ++A++L+ +++ G+ AQ+ L C G GV
Sbjct: 80 RSAENNNQYGEYWLGIFYYGGYHVSKDIKKAIELINRSAQQGYDAAQFNLGSCYANGHGV 139
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
L +A WY +AA+ G+VRA Y + Y GEG + +A +W K +A+ GH +AQ
Sbjct: 140 SKELHKAIWWYKKAADQGHVRAQYELANSYYNGEGTAKNLEKAVEWYKESAEQGHLEAQ 198
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAV 165
++ G GV L KA++ + K A +G A G + E K + A Y +AA
Sbjct: 241 YEEGLGVHIELGKAVEWYKKAAEKGFAEAQYRLGSCF-ERGKGVVKIQNKAFEWYEKAAK 299
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLHRGRGVDFNL 217
G Q LG+ Y+ E+ VK + + + +A Q+ +ALC G GV+ +L
Sbjct: 300 KGYAKAQCELGMCYVMEKGVKKDLAVAFSWYKKAADQLDSTGQWLIALCYKTGSGVEKDL 359
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ AA WY+++AE G + Y +CY+ GEG+ + +A++W+K+AAD H
Sbjct: 360 RRAAWWYIKSAEQGDPQGQYGIGVCYANGEGVSKNIDKAKEWLKKAADQNH 410
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISLYRQA 163
G + +G GV K L KA+ + K A +G A + Y+ + E A+ Y+++
Sbjct: 130 GSCYANGHGVSKELHKAIWWYKKAADQGHVRAQYELANSYYNGEGTAKNLEKAVEWYKES 189
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+ L G+ E A +L +++ G+++AQ + +C G GV
Sbjct: 190 AEQGHLEAQYKLARFYSTGEGVEKNDEMAFELYQKSAQQGNLKAQCAIGVCYEEGLGVHI 249
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
L +A WY +AAE G+ A Y C+ G+G+ +A +W ++AA G+ KAQ E
Sbjct: 250 ELGKAVEWYKKAAEKGFAEAQYRLGSCFERGKGVVKIQNKAFEWYEKAAKKGYAKAQCEL 309
Query: 276 GLGLFTE 282
G+ E
Sbjct: 310 GMCYVME 316
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 44/162 (27%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLH 208
I Y++AA GD Q+ LG Y + ++ Y S+A H +QY++ +
Sbjct: 3 IEEYKKAAEHGDAQAQYELGKYYGSGDGIRKDYVKSMAWFKKAAEQEHSNSQYEIGIYYL 62
Query: 209 RGRGVDFNLQEAARWYLRAAEG------------------------------------GY 232
G+GV NL A W+ R+AE GY
Sbjct: 63 NGKGVTKNLGRAFEWFKRSAENNNQYGEYWLGIFYYGGYHVSKDIKKAIELINRSAQQGY 122
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
A +N CY+ G G+ +A W K+AAD GH +AQ E
Sbjct: 123 DAAQFNLGSCYANGHGVSKELHKAIWWYKKAADQGHVRAQYE 164
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 21/190 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------WEMDKKEAAISLYRQA 163
+ G GV KN + A + + K A +G+ A G+ Y E+ K A+ Y++A
Sbjct: 205 YSTGEGVEKNDEMAFELYQKSAQQGNLKAQCAIGVCYEEGLGVHIELGK---AVEWYKKA 261
Query: 164 AVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+ LG + +Q +A + +A+ G+ +AQ +L +C +GV
Sbjct: 262 AEKGFAEAQYRLGSCFERGKGVVKIQNKAFEWYEKAAKKGYAKAQCELGMCYVMEKGVKK 321
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+L A WY +AA+ + +LCY G G+ R+A W ++A+ G Q ++
Sbjct: 322 DLAVAFSWYKKAADQLDSTGQWLIALCYKTGSGVEKDLRRAAWWYIKSAE--QGDPQGQY 379
Query: 276 GLGL-FTEGE 284
G+G+ + GE
Sbjct: 380 GIGVCYANGE 389
>gi|93007054|ref|YP_581491.1| hypothetical protein Pcryo_2230 [Psychrobacter cryohalolentis K5]
gi|92394732|gb|ABE76007.1| Sel1 [Psychrobacter cryohalolentis K5]
Length = 264
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQF 173
G GVR++L KA+ K A +G+ A+ G+M+ + + +A Y Q+A G P+ Q
Sbjct: 54 GTGVRQDLPKAIQWAEKPARQGNAEALFVMGMMHTQKNDTKA-FEFYLQSANQGYPSAQN 112
Query: 174 NLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
+G+SY + V+ Y +A+ G+ AQY+L+L +G GV + +A WYL
Sbjct: 113 MVGLSYKEGRGVQQDYTKAFEWIQKAANQGYPSAQYELSLMYEKGIGVKQDNAKAFEWYL 172
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
++A G +A N Y G G+ + +A +W R+A G +AQ G
Sbjct: 173 KSANQGNAQAQSNLGAMYDQGIGVQQDYAKAFEWYTRSASQGDARAQFNLG 223
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 97 PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
P + MV G +K GRGV+++ KA + K A +G A + LMY
Sbjct: 108 PSAQNMV----GLSYKEGRGVQQDYTKAFEWIQKAANQGYPSAQYELSLMY--------- 154
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
+ +G+ +A + +++ G+ +AQ L +G GV +
Sbjct: 155 ---------------EKGIGVKQDNAKAFEWYLKSANQGNAQAQSNLGAMYDQGIGVQQD 199
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+A WY R+A G RA +N Y FG+G+ +AR W+ ++ G
Sbjct: 200 YAKAFEWYTRSASQGDARAQFNLGRMYHFGKGVQQDDAKARDWLGKSCKNG 250
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 31/128 (24%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW----------------- 223
+ ++ KL+ + + G RAQ LA+ + G GV +L +A +W
Sbjct: 25 ESDSFKLMERLASQGDARAQINLAMMYYGGTGVRQDLPKAIQWAEKPARQGNAEALFVMG 84
Query: 224 --------------YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
YL++A GY A L Y G G+ + +A +W+++AA+ G+
Sbjct: 85 MMHTQKNDTKAFEFYLQSANQGYPSAQNMVGLSYKEGRGVQQDYTKAFEWIQKAANQGYP 144
Query: 270 KAQLEHGL 277
AQ E L
Sbjct: 145 SAQYELSL 152
>gi|52841296|ref|YP_095095.1| hypothetical protein lpg1062 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|148360275|ref|YP_001251482.1| TPR repeat-containing protein [Legionella pneumophila str. Corby]
gi|52628407|gb|AAU27148.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|148282048|gb|ABQ56136.1| TPR repeat protein [Legionella pneumophila str. Corby]
Length = 342
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EAM G + G+GV ++ KA+ F K A + ++ ++ G+MY +
Sbjct: 76 EAMAQRNLGLMYAAGKGVPQDNGKAMQWFRKAALQNDAVSQLNLGVMYQKGMGTQQNDRE 135
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCL 207
AI +AA G P + +LGI Y E A K L++A+ AQY LA+
Sbjct: 136 AIKWIHKAAAQGFPEAERSLGILYSTAENGQQNYVEAFKWLHKAAEKEDAIAQYNLAVMY 195
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV N EA +W+ +A + G + A L Y+ G + QA KW + AA G
Sbjct: 196 VTGKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMYATGSNVQQDDFQAMKWFRLAAKQG 255
Query: 268 HGKAQLEHGLGLFTEGEMM----KAVVYLELATRAGETAADHV 306
AQ G+G ++ KA+ + LA G A +V
Sbjct: 256 DAVAQYNIGMGFLNGKGVIRNHTKALKWFHLAASQGLPQAQYV 298
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 32/163 (19%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDP 169
G+GVR+N +A+ F K G +A GLMY + A+ +R AA GD
Sbjct: 198 GKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMYATGSNVQQDDFQAMKWFRLAAKQGDA 257
Query: 170 AGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Q+N+G+ +L G+GV N +A +W+ AA
Sbjct: 258 VAQYNIGMGFL----------------------------NGKGVIRNHTKALKWFHLAAS 289
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
G +A Y + Y G LP + +A KW+++AA GH +AQ
Sbjct: 290 QGLPQAQYVLAALYHDGVSLPQNSMEAIKWLRKAAAQGHLQAQ 332
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 169 PAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P+ N G+ Y+ EAVK +A+ G AQ L L G+GV + +A
Sbjct: 41 PSAWNNRGVDYVIGKRVAQNDSEAVKWFCKAAKQGEAMAQRNLGLMYAAGKGVPQDNGKA 100
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+W+ +AA + N + Y G G + R+A KW+ +AA G +A+ G+ L+
Sbjct: 101 MQWFRKAALQNDAVSQLNLGVMYQKGMGTQQNDREAIKWIHKAAAQGFPEAERSLGI-LY 159
Query: 281 TEGE 284
+ E
Sbjct: 160 STAE 163
>gi|54293998|ref|YP_126413.1| hypothetical protein lpl1059 [Legionella pneumophila str. Lens]
gi|397666736|ref|YP_006508273.1| Sel1 domain-containing protein repeat-containing protein
[Legionella pneumophila subsp. pneumophila]
gi|53753830|emb|CAH15296.1| hypothetical protein lpl1059 [Legionella pneumophila str. Lens]
gi|307609828|emb|CBW99345.1| hypothetical protein LPW_11231 [Legionella pneumophila 130b]
gi|395130147|emb|CCD08383.1| Sel1 domain protein repeat-containing protein [Legionella
pneumophila subsp. pneumophila]
Length = 342
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EAM G + G+GV ++ KA+ F K A + ++ ++ G+MY +
Sbjct: 76 EAMAQRNLGLMYAAGKGVPQDNGKAMQWFRKAALQNDAVSQLNLGVMYQKGMGTQQNDRE 135
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCL 207
AI +AA G P + +LGI Y E A K L++A+ AQY LA+
Sbjct: 136 AIKWIHKAAAQGFPEAERSLGILYSTAENGQQNYVEAFKWLHKAAEKEDAIAQYNLAVMY 195
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV N EA +W+ +A + G + A L Y+ G + QA KW + AA G
Sbjct: 196 VTGKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMYATGSNVQQDDFQAMKWFRLAAKQG 255
Query: 268 HGKAQLEHGLGLFTEGEMM----KAVVYLELATRAGETAADHV 306
AQ G+G ++ KA+ + LA G A +V
Sbjct: 256 DAVAQYNIGIGFLNGKGVIRNHTKALKWFHLAASQGLPQAQYV 298
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 32/163 (19%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDP 169
G+GVR+N +A+ F K G +A GLMY + A+ +R AA GD
Sbjct: 198 GKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMYATGSNVQQDDFQAMKWFRLAAKQGDA 257
Query: 170 AGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Q+N+GI +L G+GV N +A +W+ AA
Sbjct: 258 VAQYNIGIGFL----------------------------NGKGVIRNHTKALKWFHLAAS 289
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
G +A Y + Y G LP + +A KW+++AA GH +AQ
Sbjct: 290 QGLPQAQYVLAALYHDGVSLPQNSMEAIKWLRKAAAQGHLQAQ 332
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 169 PAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P+ N G+ Y+ EAVK +A+ G AQ L L G+GV + +A
Sbjct: 41 PSAWNNRGVDYVIGKRVAQNDSEAVKWFCKAAKQGEAMAQRNLGLMYAAGKGVPQDNGKA 100
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+W+ +AA + N + Y G G + R+A KW+ +AA G +A+ G+ L+
Sbjct: 101 MQWFRKAALQNDAVSQLNLGVMYQKGMGTQQNDREAIKWIHKAAAQGFPEAERSLGI-LY 159
Query: 281 TEGE 284
+ E
Sbjct: 160 STAE 163
>gi|52841586|ref|YP_095385.1| hypothetical protein lpg1356 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777221|ref|YP_005185658.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|52628697|gb|AAU27438.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364508035|gb|AEW51559.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
Length = 376
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 20/221 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA + F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVAASDDKAFNWFKKAAEQGYSKAQVNLGYQYM-MGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAGQFNLGISYLQEE---------AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA GD G+++LG+ Y +E A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGIGADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
D + +AA WY AAE G A G G+ ++QA W ++A G+ Q
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPIGQA 305
Query: 274 EHGL----GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 309
+ G GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 28/186 (15%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ G+S EA K +A+ G+ AQ + L G GV +
Sbjct: 95 ----------DTGK---GVSQDFTEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDD 141
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A W+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LG
Sbjct: 142 KAFNWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLG 199
Query: 279 LFTEGE 284
L G+
Sbjct: 200 LLYTGQ 205
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q+ G++ EEA +A+ + AQ L G+GV + EA +WY++AAE G
Sbjct: 59 QYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFTEAFKWYMKAAEQG 118
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMK 287
A N L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ K
Sbjct: 119 NPIAQRNIGLMYATGDGVAASDDKAFNWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Query: 288 AVVYLELATRAGETAADH 305
A + + A G+ ++
Sbjct: 179 AFEWYQKAAEQGDEKGEY 196
>gi|189502271|ref|YP_001957988.1| hypothetical protein Aasi_0892 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497712|gb|ACE06259.1| hypothetical protein Aasi_0892 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1877
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 16/225 (7%)
Query: 118 RKNLD----KALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVLGDP 169
+KN+D KA+ F K A + A G MY +D+ + AI Y +AA G
Sbjct: 565 KKNIDVDYEKAVAWFKKAAKQNHVDAQYRIGWMYHHAQGLDQSYKKAIKWYEKAATRGHK 624
Query: 170 AGQFNLGISYL-----QEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NLG Y Q++ +K + +AS G Q L + ++G GV + +AA
Sbjct: 625 EAQYNLGFIYDNKLGGQQDVMKAIVWYAKASEQGQTSVQNNLGIMDYKGEGVARDYLKAA 684
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
WY +AA G V A Y Y+ G G+ + A W K+A H +Q + G +
Sbjct: 685 AWYEKAANQGLVEAQYELGTIYANGLGVEQDYMNAITWFKKATQQEHAPSQNKLGWIYYD 744
Query: 282 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 326
+ + KA+ + + A + A + I Q + +D +V
Sbjct: 745 QKDYTKAITWFKKAAKQNHVNAQYNLGWIYQYIKDVGKDYEKAIV 789
Score = 75.5 bits (184), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVL 166
+++G+GV +N KA+ + K A +G A + G +Y +D+ + A + +AA+
Sbjct: 178 YENGKGVDQNYQKAIKWYTKAANKGHAEAQYNLGWIYQNSLGVDQDYQKARGWFEKAAIQ 237
Query: 167 GDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
Q+NLG Y + V Y +A++ G AQY+L GV + +
Sbjct: 238 RHAGAQYNLGCMYKDKLGVAQDYAKAREWFEKAAVQGVADAQYKLGSLYQNSLGVAQDYK 297
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------ 272
+A W+ AA + RA N Y G G+ + +AR+W K+AAD GH AQ
Sbjct: 298 KAREWFEEAAAQRHARAQNNLGFLYQHGLGMNQDYEKAREWFKKAADQGHAHAQYNLGFL 357
Query: 273 LEHGLGL 279
+HGLG+
Sbjct: 358 YQHGLGM 364
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G++ AQY +A G+GVD N Q+A +WY +AA G+ A YN Y G+ ++
Sbjct: 166 GYIDAQYNVASMYENGKGVDQNYQKAIKWYTKAANKGHAEAQYNLGWIYQNSLGVDQDYQ 225
Query: 255 QARKWMKRAADCGHGKAQLEHG 276
+AR W ++AA H AQ G
Sbjct: 226 KARGWFEKAAIQRHAGAQYNLG 247
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 55/246 (22%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AIS 158
R G + H +G+ ++ KA+ + K A RG A + G +Y D K AI
Sbjct: 593 RIGWMYHHAQGLDQSYKKAIKWYEKAATRGHKEAQYNLGFIY---DNKLGGQQDVMKAIV 649
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRG 210
Y +A+ G + Q NLGI + E V Y +A+ G V AQY+L G
Sbjct: 650 WYAKASEQGQTSVQNNLGIMDYKGEGVARDYLKAAAWYEKAANQGLVEAQYELGTIYANG 709
Query: 211 RGVDFNLQ--------------------------------EAARWYLRAAEGGYVRAMYN 238
GV+ + +A W+ +AA+ +V A YN
Sbjct: 710 LGVEQDYMNAITWFKKATQQEHAPSQNKLGWIYYDQKDYTKAITWFKKAAKQNHVNAQYN 769
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-----LEHGLGLFTEGEMMKAVVYLE 293
Y + + + + +A W ++AAD GH A+ L +GL E + K + +
Sbjct: 770 LGWIYQYIKDVGKDYEKAIVWYQKAADQGHTGAKRMLKDLIKNVGLLQENDYSKLRIQIR 829
Query: 294 LATRAG 299
T G
Sbjct: 830 PTTEYG 835
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAAISLYRQAA 164
G ++HG G+ ++ +KA + F K A +G A + G +Y M++ + + A
Sbjct: 319 GFLYQHGLGMNQDYEKAREWFKKAADQGHAHAQYNLGFLYQHGLGMNQDYTKAKEWYKKA 378
Query: 165 VLGDPAGQFNLGISYLQEEAVK-----LLYQASIAG------------------------ 195
+ AG + ++EE +K + +I G
Sbjct: 379 AEKEHAGAERMLKDLIEEEKIKDEQAEKDFLQAIQGFQILDNPANPRDINPLHKESADQI 438
Query: 196 -HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
++ AQY + + +GV+ + + Y +AAE G + A Y + Y+ G G+ +
Sbjct: 439 ENINAQYNVISMCEKEKGVEKDYGKERERYEKAAEQGDIEAQYELGIIYANGLGIKQDYT 498
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
+A+ W+++AA+ GH AQ G ++ G+ +K
Sbjct: 499 RAKGWLEKAAEQGHRAAQFNLGW-MYYHGQGVK 530
Score = 43.1 bits (100), Expect = 0.19, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A+ GY+ A YN + Y G+G+ ++++A KW +AA+ GH +AQ G
Sbjct: 161 KDADHGYIDAQYNVASMYENGKGVDQNYQKAIKWYTKAANKGHAEAQYNLG 211
>gi|359408934|ref|ZP_09201402.1| TPR repeat-containing protein [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356675687|gb|EHI48040.1| TPR repeat-containing protein [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 1229
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 104/219 (47%), Gaps = 20/219 (9%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYR 161
R G + G G+ N + FL A++G A + G Y + D E AI+ R
Sbjct: 907 RLGVMAREGLGIAINAEVMEQRFLAAASQGDVRAQLALGKAYRKGDMLSQNYEQAIAFLR 966
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
A D +F LG L E+A++ +A+ H+ AQY LA LH G V
Sbjct: 967 LAIDQQDREAEFTLGQMRLNGEGSAADPEQAIRHFRKAADNDHMLAQYTLADLLHMGTVV 1026
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ- 272
++ EAA +Y +AA+ GY+ A Y T+L Y G+G + QA ++ + AA GH +Q
Sbjct: 1027 KQDMTEAAYYYEQAAKQGYMMAQYRTALLYDTGKGGLKGYTQAAQFYELAAKQGHVPSQH 1086
Query: 273 -----LEHGLGLFTEGEMMKAVVYLELATRAGETAADHV 306
LE+GLGL + +M +A + A G+ A H
Sbjct: 1087 NLAILLENGLGL--KADMEQAAYWYGQAAEKGDMNAQHA 1123
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLM---YWEMDKKEAAISLYRQAAVL 166
++ G GV +++ A F A +G + + AGL Y + AA Y +AA
Sbjct: 192 YRRGAGVDQDMQMAARWFTAAAEQGDRASQANLAGLYENGYGVIQDYAAAAKWYEEAAKK 251
Query: 167 GDPAGQFNL------GISYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD QF L G+ Q+ A++L QA+ GH+ A YQ+AL +G GV+ +LQ
Sbjct: 252 GDMDSQFGLARLYQAGLGVAQDFTIAIQLYQQAADKGHIGAHYQIALMYSKGEGVERDLQ 311
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH------GKAQ 272
+A W+ AA+ G A ++ + Y G+GL + QA W +++A G+ +
Sbjct: 312 QAEAWHKMAADMGDEDAQFDIAQRYKNGDGLRMDFEQAAFWFEKSAKGGNIAAMAALASA 371
Query: 273 LEHGLGLFTEGEMMKAVVYLELATRAGETAADHV 306
+ G+GL + E A ++ E A G+T + +
Sbjct: 372 YDDGIGLGKDDE--AASLWYERAALEGDTESQFI 403
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAAISL-YRQAA 164
+R+K+G G+R + ++A F K A G+ AM Y + + K + A SL Y +AA
Sbjct: 334 QRYKNGDGLRMDFEQAAFWFEKSAKGGNIAAMAALASAYDDGIGLGKDDEAASLWYERAA 393
Query: 165 VLGDPAGQFNL------GISYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
+ GD QF + GI L+ +AV+ A+ H+ A Y+LA +G G D N
Sbjct: 394 LEGDTESQFIIATRYEAGIGILRNPGKAVQFYTLAAEKSHIEASYRLARLYDQGIGTDEN 453
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
EAA+WYLRAA G+ A Y G G+ QAR+++ AA+ G +Q
Sbjct: 454 PAEAAKWYLRAASSGHGPAQAMMGRLYMLGRGVDKDIIQAREFLAIAAEKGDDVSQ 509
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 95/228 (41%), Gaps = 30/228 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
FK+G+GV ++LDKA+ F + A RG A GL Y+ +
Sbjct: 120 FKNGQGVERDLDKAVIWFTQAAERGDATAQNMLGLFYY---------------------S 158
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
GQ G+ A K A+ G +QY LA RG GVD ++Q AARW+ AAE
Sbjct: 159 GQ---GVKQNFTTAAKYYQMAAEQGDRDSQYMLASLYRRGAGVDQDMQMAARWFTAAAEQ 215
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMM 286
G + N + Y G G+ + A KW + AA G +Q + GL +
Sbjct: 216 GDRASQANLAGLYENGYGVIQDYAAAAKWYEEAAKKGDMDSQFGLARLYQAGLGVAQDFT 275
Query: 287 KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334
A+ + A G A + ++ + RD + ++W M +
Sbjct: 276 IAIQLYQQAADKGHIGAHYQIALMYSKGEGVERD--LQQAEAWHKMAA 321
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 26/257 (10%)
Query: 82 RAASLVCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
R ++ +++ A+ LR A+ G+ +G G + ++A+ F K A
Sbjct: 949 RKGDMLSQNYEQAIAFLRLAIDQQDREAEFTLGQMRLNGEGSAADPEQAIRHFRKAADND 1008
Query: 136 STLAMVD-AGLMYW----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------E 182
LA A L++ + D EAA Y QAA G Q+ + Y
Sbjct: 1009 HMLAQYTLADLLHMGTVVKQDMTEAAY-YYEQAAKQGYMMAQYRTALLYDTGKGGLKGYT 1067
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+A + A+ GHV +Q+ LA+ L G G+ ++++AA WY +AAE G + A + +
Sbjct: 1068 QAAQFYELAAKQGHVPSQHNLAILLENGLGLKADMEQAAYWYGQAAEKGDMNAQHALGMM 1127
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATR 297
Y G G+ S+ +A +A+ GH ++Q+ G+ ++ +G + +KA ++ +A
Sbjct: 1128 YDAGRGVEQSYTRAADLYLASAEQGHIESQVSLGV-VYVKGKDAVQDYIKAHMWFNIAAA 1186
Query: 298 AGETAADHVKNVILQQL 314
G A ++ I +++
Sbjct: 1187 QGNRTARDYRDRIAKRM 1203
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLA------MVDAGLMYWEMDKKEAAISLYR 161
G+ + GRGV K++ +A + A +G ++ D G E D A Y+
Sbjct: 477 GRLYMLGRGVDKDIIQAREFLAIAAEKGDDVSQYLLAEFYDIGEGLLEDDT--LAAKFYK 534
Query: 162 QAAVLGDPAGQFNLGISYL------QEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGV 213
+A G Q+ LG Y Q++ + L Y A+ G AQ +LA G GV
Sbjct: 535 LSADQGYAPAQYKLGQIYAAGRGLKQDDELALSYFRLAAEQGLAAAQTKLAQIYEAGNGV 594
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
NL+ AA WY++AAE G + A + G G+ R + W AA+ G AQ
Sbjct: 595 KVNLKTAASWYVKAAEQGAMNAQIWLGFAHKTGTGVAKDSRLSADWFLLAANQGDAVAQF 654
Query: 274 EHG 276
E G
Sbjct: 655 ETG 657
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 18/238 (7%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLY 160
+ G+ + GRG++++ + AL F A +G A +Y +++ K AA S Y
Sbjct: 547 KLGQIYAAGRGLKQDDELALSYFRLAAEQGLAAAQTKLAQIYEAGNGVKVNLKTAA-SWY 605
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRG 212
+AA G Q LG ++ V A+ G AQ++ G G
Sbjct: 606 VKAAEQGAMNAQIWLGFAHKTGTGVAKDSRLSADWFLLAANQGDAVAQFETGTAYESGTG 665
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ ++ EA W+ +AA+ ++ + Y + Y G G+ + W+K AAD H +A
Sbjct: 666 LKEDIAEAMFWFEQAAQQNHIESQYRVGMGYLQGNGVTADDMASFNWLKLAADQDHKQAA 725
Query: 273 LEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 326
G G TE + AV Y A A A + +IL A+ D + +V
Sbjct: 726 RHLGDLLRTGRGTEINIADAVFYYRRAADANIMEAQYQLAMILGGPGASEADISEAIV 783
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 94/242 (38%), Gaps = 56/242 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG-----STLAMVDAGLMYWEMDKKEAAISLYRQ 162
G + GRG N+ A+ + + A LAM+ G E D EA I LY +
Sbjct: 729 GDLLRTGRGTEINIADAVFYYRRAADANIMEAQYQLAMILGGPGASEADISEA-IVLYDK 787
Query: 163 AAVLGDPAGQFNLGI----------------SYLQEEAVKLLYQASI------------- 193
AA GD Q LGI +YL+ A + + +A
Sbjct: 788 AAQQGDSRSQLILGIYFDEGSVVPADKTKAATYLEMAAAQDITEAQFRLAQLYDGGAIDG 847
Query: 194 ---------------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
GHV A Y LA GRGV+ N EAAR+Y A+ Y A +
Sbjct: 848 KTATDAADYYESAARNGHVGAHYYLARLYDDGRGVEQNYAEAARYYELPADQLYADAAWR 907
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLE 293
+ G G+ ++ + AA G +AQL G + +G+M+ +A+ +L
Sbjct: 908 LGVMAREGLGIAINAEVMEQRFLAAASQGDVRAQLALGKA-YRKGDMLSQNYEQAIAFLR 966
Query: 294 LA 295
LA
Sbjct: 967 LA 968
>gi|381181654|ref|ZP_09890487.1| Sel1 domain protein repeat-containing protein [Treponema
saccharophilum DSM 2985]
gi|380766440|gb|EIC00446.1| Sel1 domain protein repeat-containing protein [Treponema
saccharophilum DSM 2985]
Length = 260
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 16/177 (9%)
Query: 128 FLKGAARGSTLAMVDAGLMY------WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL- 180
+ K A++G+ A + ++Y E D+ E A L+ ++A G QF +G Y
Sbjct: 52 YEKCASQGNASAQYNLAMLYKSGTDEIEQDE-ETAAKLFMESAEKGFAPAQFCVGSMYDD 110
Query: 181 -------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+ +A+K A+ +G+ RAQY LA+ G GV N+ EA +W+ ++AE G V
Sbjct: 111 GTGTAQDKNKALKWYRTAAESGYERAQYNLAIMYDTGDGVQKNVAEAIKWFRKSAEQGNV 170
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 290
A YN + Y G+G+P +A KW + AA+ G AQ G ++ +GE + A +
Sbjct: 171 NAQYNMANYYDTGDGVPQDKVEAIKWYRMAAEQGFAPAQRNLGC-MYHDGEGVPADI 226
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQ 172
+ ++ + A F++ A +G A G MY + K A+ YR AA G Q
Sbjct: 78 IEQDEETAAKLFMESAEKGFAPAQFCVGSMYDDGTGTAQDKNKALKWYRTAAESGYERAQ 137
Query: 173 FNLGISY-----LQE---EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+NL I Y +Q+ EA+K +++ G+V AQY +A G GV + EA +WY
Sbjct: 138 YNLAIMYDTGDGVQKNVAEAIKWFRKSAEQGNVNAQYNMANYYDTGDGVPQDKVEAIKWY 197
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
AAE G+ A N Y GEG+P ++ KW AA+ G AQ
Sbjct: 198 RMAAEQGFAPAQRNLGCMYHDGEGVPADIEESVKWFLMAAEQGDYNAQF 246
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G + G G ++ +KAL + A G A + +MY D + AI +R++
Sbjct: 105 GSMYDDGTGTAQDKNKALKWYRTAAESGYERAQYNLAIMYDTGDGVQKNVAEAIKWFRKS 164
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ Q+N+ G+ + EA+K A+ G AQ L H G GV
Sbjct: 165 AEQGNVNAQYNMANYYDTGDGVPQDKVEAIKWYRMAAEQGFAPAQRNLGCMYHDGEGVPA 224
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+++E+ +W+L AAE G A + Y GE
Sbjct: 225 DIEESVKWFLMAAEQGDYNAQFALYNMYQAGE 256
>gi|407039215|gb|EKE39510.1| protein kinase, putative [Entamoeba nuttalli P19]
Length = 1038
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 24/166 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+K+G GV+ + + + L+ A GS++AM + G Y+ LG+
Sbjct: 726 YKYGTGVKMSNELYVQWTLQAANNGSSIAMFNVGCWYY-----------------LGE-- 766
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
N ++ ++EAVK Y+++ G+ +A L C G GV+ N ++A +W+ R+A+
Sbjct: 767 ---NFKVN--KKEAVKWYYKSAKEGYGKAMCNLGRCYFDGEGVECNKKKAFKWFKRSAKK 821
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
G V +N S CY +G+G + +A W K A+ GH +A + +G
Sbjct: 822 GIVSGQFNCSNCYYYGDGTQRNIDKAMYWSKLASINGHARAFIIYG 867
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G K ++KAL F ++ GS +A + G++ + ++ E I R
Sbjct: 612 GVFYSLGYGTSKQINKALHLFDIASSHGSGIAENNKGVILFSGNEHENEI---RDCV--- 665
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
EA++ ++S G + ++C G GV+ + +A + ++
Sbjct: 666 ---------------EALQCFIRSSEKGCKEGMFNASVCYFNGDGVEKDDYKAIEYLKKS 710
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
AE GY A + CY +G G+ +S+ +W +AA+ G A G
Sbjct: 711 AELGYAEAECLLASCYKYGTGVKMSNELYVQWTLQAANNGSSIAMFNVG 759
>gi|223935384|ref|ZP_03627301.1| Sel1 domain protein repeat-containing protein [bacterium Ellin514]
gi|223895794|gb|EEF62238.1| Sel1 domain protein repeat-containing protein [bacterium Ellin514]
Length = 693
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 14/189 (7%)
Query: 160 YRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+R+AA G+ + Q L +Y + EA K A+ AQY A+CL G+
Sbjct: 287 FRKAAKQGESSAQLQLASNYASGEGVEKNEAEAAKWYRMAAEKELAEAQYMYAICLFSGK 346
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV N E+A+WY RAA+ +V A Y+ G G+P+ + +A KW ++A+ G+ A
Sbjct: 347 GVPKNQSESAQWYKRAADQNHVLAQLELGDDYALGRGVPVDYGEAVKWYYKSAEAGNALA 406
Query: 272 QLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVD 327
Q + G LGL + AV + E A + G A + V ++D + V
Sbjct: 407 QFQLGTCCLLGLGVQTNFTLAVKWFEKAGQQGVVEAQYKCGVAYLIGEGVAKD--LKVAT 464
Query: 328 SWRAMPSLH 336
+W + + H
Sbjct: 465 NWFYLAASH 473
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKE--AAISLYRQAAVLGDP 169
G GV+ N A+ F K +G A G+ Y E K+ A + + AA G
Sbjct: 417 GLGVQTNFTLAVKWFEKAGQQGVVEAQYKCGVAYLIGEGVAKDLKVATNWFYLAASHGKV 476
Query: 170 AGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
Q LG ++++ EA K +A+ G+ +AQY L + +G GV + E ARW
Sbjct: 477 MAQLQLGNCHIKDKNYTEAAKWFLKAAEGGNAQAQYWLGILYSKGLGVPQDYAEDARWTR 536
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 285
+AAE G A + + Y G+G+P ++ +A KW + AD G+ AQ GL +++G +
Sbjct: 537 KAAEQGLAEAEGSMAFLYEQGKGVPQNNGEALKWYLKGADHGNPVAQFNLGLA-YSKGSL 595
Query: 286 -----MKAVVYLELATRAGETAADH 305
+AV + A G AA +
Sbjct: 596 GITNAAEAVKWFRKAAEQGVAAAQN 620
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 122/322 (37%), Gaps = 38/322 (11%)
Query: 32 LTASARKARIKRRSRFSCS-RSIKSTEGHDFASLPFDVLNKIAAS-FTLPQLRAASLVCK 89
LT SA K + +S+F + T GH S + + A + + L Q CK
Sbjct: 215 LTLSAEKGTV--QSQFDLGLVCVDPTSGHYNPSEGINWFRRAAENDYALAQCVLGDCYCK 272
Query: 90 S------------WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST 137
W E+ L+ + G GV KN +A + A +
Sbjct: 273 GKLVPKDPVEGSRWFRKAAKQGESSAQLQLASNYASGEGVEKNEAEAAKWYRMAAEK--- 329
Query: 138 LAMVDAGLMY---------WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL-------- 180
+ +A MY ++ E+A Y++AA Q LG Y
Sbjct: 330 -ELAEAQYMYAICLFSGKGVPKNQSESA-QWYKRAADQNHVLAQLELGDDYALGRGVPVD 387
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
EAVK Y+++ AG+ AQ+QL C G GV N A +W+ +A + G V A Y
Sbjct: 388 YGEAVKWYYKSAEAGNALAQFQLGTCCLLGLGVQTNFTLAVKWFEKAGQQGVVEAQYKCG 447
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGE 300
+ Y GEG+ + A W AA G AQL+ G + +A + A G
Sbjct: 448 VAYLIGEGVAKDLKVATNWFYLAASHGKVMAQLQLGNCHIKDKNYTEAAKWFLKAAEGGN 507
Query: 301 TAADHVKNVILQQLSATSRDRA 322
A + ++ + +D A
Sbjct: 508 AQAQYWLGILYSKGLGVPQDYA 529
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLD 122
L ++ S L Q+ + W+ ++ L A + + G + G GV N
Sbjct: 78 LEDLSISTDLKQINSLHGQPSEWDKQIKSLMTAANRGDRVAQYKLGTAYDRGFGVPTNNV 137
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGIS 178
+AL + K A + A G Y D + A+I Y++A NLG++
Sbjct: 138 EALRWYRKAAEQSLPEAQYLVGRAYAFGDGIAKDQAASIGWYQKAVDQNYVPAMHNLGMA 197
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLAL-CLHRGRGVDFNLQEAARWYLRAAE 229
Y+ +E V+LL ++ G V++Q+ L L C+ G +N E W+ RAAE
Sbjct: 198 YVAGLGVATNVDEGVRLLTLSAEKGTVQSQFDLGLVCVDPTSG-HYNPSEGINWFRRAAE 256
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
Y A CY G+ +P + +W ++AA G AQL+
Sbjct: 257 NDYALAQCVLGDCYCKGKLVPKDPVEGSRWFRKAAKQGESSAQLQ 301
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
++ +K L A+ G AQY+L RG GV N EA RWY +AAE A Y
Sbjct: 101 DKQIKSLMTAANRGDRVAQYKLGTAYDRGFGVPTNNVEALRWYRKAAEQSLPEAQYLVGR 160
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
Y+FG+G+ + W ++A D + A H LG+
Sbjct: 161 AYAFGDGIAKDQAASIGWYQKAVDQNYVPAM--HNLGM 196
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 40/125 (32%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N +AL +LKGA G +P
Sbjct: 554 YEQGKGVPQNNGEALKWYLKGADHG--------------------------------NPV 581
Query: 171 GQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
QFNLG++Y + EAVK +A+ G AQ L G GV +L EA +
Sbjct: 582 AQFNLGLAYSKGSLGITNAAEAVKWFRKAAEQGVAAAQNSLGYAYDTGNGVTPDLVEAYK 641
Query: 223 WYLRA 227
WY A
Sbjct: 642 WYTLA 646
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 14/158 (8%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQF 173
KN +A FLK A G+ A G++Y + D E A R+AA G +
Sbjct: 490 KNYTEAAKWFLKAAEGGNAQAQYWLGILYSKGLGVPQDYAEDA-RWTRKAAEQGLAEAEG 548
Query: 174 NLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
++ Y Q EA+K + + G+ AQ+ L L +G N EA +W+
Sbjct: 549 SMAFLYEQGKGVPQNNGEALKWYLKGADHGNPVAQFNLGLAYSKGSLGITNAAEAVKWFR 608
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
+AAE G A + Y G G+ +A KW A
Sbjct: 609 KAAEQGVAAAQNSLGYAYDTGNGVTPDLVEAYKWYTLA 646
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQ 200
E DK+ I AA GD Q+ LG +Y EA++ +A+ AQ
Sbjct: 99 EWDKQ---IKSLMTAANRGDRVAQYKLGTAYDRGFGVPTNNVEALRWYRKAAEQSLPEAQ 155
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y + G G+ + + WY +A + YV AM+N + Y G G+ + + + +
Sbjct: 156 YLVGRAYAFGDGIAKDQAASIGWYQKAVDQNYVPAMHNLGMAYVAGLGVATNVDEGVRLL 215
Query: 261 KRAADCGHGKAQLEHGL 277
+A+ G ++Q + GL
Sbjct: 216 TLSAEKGTVQSQFDLGL 232
>gi|422022458|ref|ZP_16368966.1| Sel1 domain-containing protein [Providencia sneebia DSM 19967]
gi|414096951|gb|EKT58607.1| Sel1 domain-containing protein [Providencia sneebia DSM 19967]
Length = 343
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-----MYWEMDKKEAA 156
++L W ++ G +K+ KA +L A + A+ G MY E++ ++A
Sbjct: 152 LMLAYW---YEKGITTKKDQQKAQKIYLSLAENNNPQALYLLGYQAATGMYDEVNYQQA- 207
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLH 208
+ ++A LG Q +LG+ YL + A+K L ++ G + AQ+ LAL
Sbjct: 208 YQYFSRSAQLGFSPAQNSLGMLYLHGQGGKKDVQTAIKWLTLSAEQGEISAQFNLALIYA 267
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
RG G+ + A RW++ AA+ G A Y + CY +G G+ S +QA KW K AA GH
Sbjct: 268 RGDGIPADQATACRWFISAAQHGSPDAQYASGACYQYGMGVTQSDKQALKWYKLAATQGH 327
Query: 269 GKA 271
+A
Sbjct: 328 ERA 330
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
+G AQ+ LA+ + + EA +WY +AAE G+ +A N +L Y G G+ +
Sbjct: 39 SGQTEAQFNLAMLYQS----ENKMTEAVKWYQQAAEKGFTKAQINLALLYQQGHGVKKDN 94
Query: 254 RQARKWMKRAADCGHGKAQL 273
Q WMK+AAD G Q+
Sbjct: 95 AQMLYWMKQAADAGDPLGQM 114
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
++A + +++ G AQ L + G+G ++Q A +W +AE G + A +N +L
Sbjct: 205 QQAYQYFSRSAQLGFSPAQNSLGMLYLHGQGGKKDVQTAIKWLTLSAEQGEISAQFNLAL 264
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
Y+ G+G+P A +W AA G AQ G
Sbjct: 265 IYARGDGIPADQATACRWFISAAQHGSPDAQYASG 299
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 92/229 (40%), Gaps = 56/229 (24%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK- 186
++ A G T A + ++Y +K A+ Y+QAA G Q NL + Y Q VK
Sbjct: 33 WITQAESGQTEAQFNLAMLYQSENKMTEAVKWYQQAAEKGFTKAQINLALLYQQGHGVKK 92
Query: 187 ----LLY---QASIAG-------------------------------------HVR-AQY 201
+LY QA+ AG H + A+
Sbjct: 93 DNAQMLYWMKQAADAGDPLGQMNMAEYTLSGINNLLTKNEQQAQDWLEKAAAQHFQPAEL 152
Query: 202 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL--PLSHRQARKW 259
LA +G + Q+A + YL AE +A+Y L Y G+ ++++QA ++
Sbjct: 153 MLAYWYEKGITTKKDQQKAQKIYLSLAENNNPQALY--LLGYQAATGMYDEVNYQQAYQY 210
Query: 260 MKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAA 303
R+A G AQ G+ L+ G+ + A+ +L L+ GE +A
Sbjct: 211 FSRSAQLGFSPAQNSLGM-LYLHGQGGKKDVQTAIKWLTLSAEQGEISA 258
>gi|328773958|gb|EGF83995.1| hypothetical protein BATDEDRAFT_8526, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 224
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G + G G ++++ A + K A S A+ + G +Y E+ + A +Y++
Sbjct: 15 GVMLEFGLGRKRDMPNATKWYRKAAEGKSAEALNNLGRLY-ELGRGCQVSHVLATEMYKR 73
Query: 163 AAVLGDPAGQFN--------LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA LG G N LG++ AV+L A+ G+ RAQ L C +RGRG+
Sbjct: 74 AAKLGHLDGITNYAFMIENGLGVAQDLRMAVELYRSAADMGYARAQNALGSCYYRGRGIR 133
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA WY AA+ G+ A N +CY G G+ + A+ + ++AAD H
Sbjct: 134 RDHTEAVIWYRAAADQGFPPAQNNLGICYEEGNGIGKDNIMAKAYYQKAADLRHPSGTNN 193
Query: 275 HGLGLFTEGEMMKAVVYLELATRAG 299
G L TEG+ + A+ Y +A G
Sbjct: 194 LGYMLLTEGDYIAAMQYFHVALSLG 218
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L + L G G ++ A +WY +AAEG A+ N Y G G +SH A + KR
Sbjct: 14 LGVMLEFGLGRKRDMPNATKWYRKAAEGKSAEALNNLGRLYELGRGCQVSHVLATEMYKR 73
Query: 263 AADCGHGKA------QLEHGLGL 279
AA GH +E+GLG+
Sbjct: 74 AAKLGHLDGITNYAFMIENGLGV 96
>gi|225024092|ref|ZP_03713284.1| hypothetical protein EIKCOROL_00960 [Eikenella corrodens ATCC
23834]
gi|224943117|gb|EEG24326.1| hypothetical protein EIKCOROL_00960 [Eikenella corrodens ATCC
23834]
Length = 578
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV+++ +A F K AA+G+ A ++ G++Y+ + +A I + +
Sbjct: 247 GLLYMQGYGVKQDYAQARTWFEKAAAQGNADAQINLGMLYYNGRGVNQNYTQAKIWI-EK 305
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA + GQ++LG+ Y E V+ Y +A+ H AQ L + + G GV
Sbjct: 306 AAAQNNVDGQYSLGVLYNNGEGVEQDYAQAHYWYEKAAAQNHPEAQNSLGIMYYAGHGVP 365
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A W+ +AA + Y L Y G G+P + QAR W ++AA H AQ
Sbjct: 366 QDYAQARMWFEKAAAQNHADGQYYLGLLYDNGHGVPQDYTQARMWFEKAAAQNHPDAQNN 425
Query: 275 HGLGLFTEGE 284
G ++ EG+
Sbjct: 426 LG-AMYYEGQ 434
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 78 LPQ--LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
+PQ RA + + K+ N L + A+ G ++ G+GV ++ +A + K AA+G
Sbjct: 184 VPQDYARAKTWLEKAANQGLPQAQFAL-----GDLYESGQGVPQSYRQAHLWYGKAAAQG 238
Query: 136 STLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY-- 189
++ GL+Y + A + + +AA G+ Q NLG+ Y V Y
Sbjct: 239 NSDGQNMLGLLYMQGYGVKQDYAQARTWFEKAAAQGNADAQINLGMLYYNGRGVNQNYTQ 298
Query: 190 ------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
+A+ +V QY L + + G GV+ + +A WY +AA + A + + Y
Sbjct: 299 AKIWIEKAAAQNNVDGQYSLGVLYNNGEGVEQDYAQAHYWYEKAAAQNHPEAQNSLGIMY 358
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
G G+P + QAR W ++AA H Q GL L+ G
Sbjct: 359 YAGHGVPQDYAQARMWFEKAAAQNHADGQYYLGL-LYDNG 397
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
++W + E G + GRGV ++ +A K A +G A G +Y
Sbjct: 155 ARAWYEKAAAQNEPAAQNNLGLMYYEGRGVPQDYARAKTWLEKAANQGLPQAQFALGDLY 214
Query: 148 WEMDKKEAAISLYRQ-------AAVLGDPAGQFNLGISYLQEEAVKLLY--------QAS 192
+ + YRQ AA G+ GQ LG+ Y+Q VK Y +A+
Sbjct: 215 ---ESGQGVPQSYRQAHLWYGKAAAQGNSDGQNMLGLLYMQGYGVKQDYAQARTWFEKAA 271
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
G+ AQ L + + GRGV+ N +A W +AA V Y+ + Y+ GEG+
Sbjct: 272 AQGNADAQINLGMLYYNGRGVNQNYTQAKIWIEKAAAQNNVDGQYSLGVLYNNGEGVEQD 331
Query: 253 HRQARKWMKRAADCGHGKAQLEHGL 277
+ QA W ++AA H +AQ G+
Sbjct: 332 YAQAHYWYEKAAAQNHPEAQNSLGI 356
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV ++ +A + K AA+ A G+MY+ D +A + + +
Sbjct: 319 GVLYNNGEGVEQDYAQAHYWYEKAAAQNHPEAQNSLGIMYYAGHGVPQDYAQARM-WFEK 377
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA GQ+ LG+ Y V Y +A+ H AQ L + G+GV
Sbjct: 378 AAAQNHADGQYYLGLLYDNGHGVPQDYTQARMWFEKAAAQNHPDAQNNLGAMYYEGQGVT 437
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N +A W+ +AA A Y G+G+P ++RQAR W ++AA G AQ +
Sbjct: 438 QNYTQARIWFEKAAAQNLPEAQTFLGNIYKLGQGVPQNYRQARYWYEKAAFQGFATAQYD 497
Query: 275 HGLGLFTEG 283
GL L+ EG
Sbjct: 498 LGL-LYYEG 505
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GV ++ +A F K AA+ A + G MY+E + +A I + +
Sbjct: 391 GLLYDNGHGVPQDYTQARMWFEKAAAQNHPDAQNNLGAMYYEGQGVTQNYTQARI-WFEK 449
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA P Q LG Y + V Y +A+ G AQY L L + G GV
Sbjct: 450 AAAQNLPEAQTFLGNIYKLGQGVPQNYRQARYWYEKAAFQGFATAQYDLGLLYYEGNGVP 509
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N + W +AA G +A + Y G G+P +H QAR W +AA G AQ
Sbjct: 510 KNYTQTRIWLEKAAVQGLPQAQSDLGAIYELGLGVPKNHAQARYWYTKAAIQGDDDAQ 567
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA---- 163
G + G GV ++ +A F K AA+ GL+Y D Y QA
Sbjct: 355 GIMYYAGHGVPQDYAQARMWFEKAAAQNHADGQYYLGLLY---DNGHGVPQDYTQARMWF 411
Query: 164 ---AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRG 212
A P Q NLG Y + + V Y +A+ AQ L G+G
Sbjct: 412 EKAAAQNHPDAQNNLGAMYYEGQGVTQNYTQARIWFEKAAAQNLPEAQTFLGNIYKLGQG 471
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V N ++A WY +AA G+ A Y+ L Y G G+P ++ Q R W+++AA G +AQ
Sbjct: 472 VPQNYRQARYWYEKAAFQGFATAQYDLGLLYYEGNGVPKNYTQTRIWLEKAAVQGLPQAQ 531
Query: 273 ------LEHGLGL 279
E GLG+
Sbjct: 532 SDLGAIYELGLGV 544
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ L L + GRGV + A W +AA G +A + Y G+G+P S+RQA
Sbjct: 170 AQNNLGLMYYEGRGVPQDYARAKTWLEKAANQGLPQAQFALGDLYESGQGVPQSYRQAHL 229
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
W +AA G+ Q GL L+ +G +K
Sbjct: 230 WYGKAAAQGNSDGQNMLGL-LYMQGYGVK 257
>gi|83943557|ref|ZP_00956016.1| hypothetical protein EE36_01610 [Sulfitobacter sp. EE-36]
gi|83845789|gb|EAP83667.1| hypothetical protein EE36_01610 [Sulfitobacter sp. EE-36]
Length = 422
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G ++ G+GV + A D F + AA+G A G M+ E+ + A A + YR+
Sbjct: 100 GVSYRFGQGVDPDAKTAFDYFTRAAAQGFDKAQFSLGNMH-ELGEGTAQSDAEARAWYRK 158
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ GQ+ LGI L+ EEA +LL ++ G AQY L + G GV
Sbjct: 159 AAEQGNAMGQYRLGILLLEGRGGEAAPEEAQQLLRASAEQGLADAQYSLGWMANHGVGVT 218
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY AAE GY A N Y+ G G +A W AA G AQ+
Sbjct: 219 QDHGQALEWYRLAAEQGYAPAQINLGNLYAEGLGTSQDDEKAVGWYYEAARNGVPAAQVN 278
Query: 275 HG----LGLFTEGEMMKAVVYLELATRAGETAA 303
G LG + + +A+V+ + A GE A
Sbjct: 279 MGKHYALGRGVQQDFDEAMVWYQQAAEYGEPVA 311
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 105/249 (42%), Gaps = 42/249 (16%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + L +A L W HG GV ++ +AL+ + A +G A ++ G +Y E
Sbjct: 196 AEQGLADAQYSLGW--MANHGVGVTQDHGQALEWYRLAAEQGYAPAQINLGNLYAEGLGT 253
Query: 150 MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHR 209
E A+ Y +AA G PA Q N+G Y AL
Sbjct: 254 SQDDEKAVGWYYEAARNGVPAAQVNMGKHY------------------------AL---- 285
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
GRGV + EA WY +AAE G A N L Y G+G P +A +W + AA+ G
Sbjct: 286 GRGVQQDFDEAMVWYQQAAEYGEPVAYLNVGLLYENGQGRPADPAEAARWYRAAAERGEP 345
Query: 270 K--AQLEH--GLGLFTEGEMMKAVVYLELA---TRAGETAADHVKNVIL-QQLSATSRDR 321
+ A+L H G+ + + A + A R GE A + + + QQL+ +
Sbjct: 346 RSLAKLAHFYAEGISVTPDPVTAWALQDTAMAYDRDGELDAPEERLMQMGQQLAPQQKGE 405
Query: 322 AMLVVDSWR 330
A + SW+
Sbjct: 406 AKALAQSWQ 414
>gi|93006436|ref|YP_580873.1| hypothetical protein Pcryo_1612 [Psychrobacter cryohalolentis K5]
gi|92394114|gb|ABE75389.1| Sel1 [Psychrobacter cryohalolentis K5]
Length = 232
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G G+ ++ KA + + K A +G+ A + G MY D A+ YR+A
Sbjct: 51 GVMYDEGSGIAQDTAKAFEWYQKAAEQGNASAQFNIGWMYEHADGVSQDSVKAVEWYRKA 110
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ--------LALCLHRGRGVDF 215
A G Q+NLG Y +K Y ++ +++A YQ + +G GV
Sbjct: 111 ADQGYGDAQYNLGWMYHNGRGIKKDYDQAMDWYLKAAYQGDAGAQNNIGDMYEKGAGVSK 170
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +AA+WYL+AA GY A + L Y G G+ +Q+R W +A D G
Sbjct: 171 DNVKAAKWYLKAANQGYALAQNSLGLMYFEGRGVLQDKKQSRDWYSKACDNG 222
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 132 AARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE---- 183
A +G A + G+MY E A Y++AA G+ + QFN+G Y +
Sbjct: 39 ANQGRASAQFNLGVMYDEGSGIAQDTAKAFEWYQKAAEQGNASAQFNIGWMYEHADGVSQ 98
Query: 184 ----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
AV+ +A+ G+ AQY L H GRG+ + +A WYL+AA G A N
Sbjct: 99 DSVKAVEWYRKAADQGYGDAQYNLGWMYHNGRGIKKDYDQAMDWYLKAAYQGDAGAQNNI 158
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
Y G G+ + +A KW +AA+ G+ AQ GL ++ EG
Sbjct: 159 GDMYEKGAGVSKDNVKAAKWYLKAANQGYALAQNSLGL-MYFEG 201
>gi|195449906|ref|XP_002072278.1| GK22768 [Drosophila willistoni]
gi|194168363|gb|EDW83264.1| GK22768 [Drosophila willistoni]
Length = 817
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ ++++ KAL+ F + A G+ + G +Y E ++ E A + +A+
Sbjct: 335 YQGGKAIQQDHQKALEYFTQAANAGNAIGFAFLGKLYLEGSEQIKADNETAFKYFSKASE 394
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+GDP GQ LG+ YL+ +A+ QA+ G V Q QL G GV +
Sbjct: 395 MGDPVGQSGLGLMYLKGLGMPKDTNKALSYFTQAADQGWVDGQLQLGTMYFTGNGVKTDY 454
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A +++ A + G+V A YN + +++G G+ S A ++ K A+ G +L H
Sbjct: 455 KLAMKYFNLATQSGHVLAYYNLGVMHAYGMGMLRSCPAAVEFFKNVAERGRWSTRLMHAY 514
Query: 278 GLFTEGEMMKAVVYLELATRAGETAA 303
+ + + +A + L G A
Sbjct: 515 SDYKQNRIDEAYMQYALMAEVGYEVA 540
>gi|355718374|gb|AES06245.1| sel-1 suppressor of lin-12-like protein [Mustela putorius furo]
Length = 591
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 180 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 239
Query: 169 PAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG++YL V++ Y +A+ G V Q QL + G GV + ++A
Sbjct: 240 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 299
Query: 221 ARWYLRAAEGGYVRAMYNTSLCY-----SFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+++ A++GG++ A YN + + + G G+ S A + K + G +L
Sbjct: 300 LKYFNLASQGGHILAFYNLAQMHASGTGASGTGVMRSCHTAVELFKNVCERGRWSERLMT 359
Query: 276 GLGLFTEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+ +G+ AV+ YL LA + E A + IL Q AT
Sbjct: 360 AYNSYKDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 401
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 55 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 114
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 115 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 174
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 263
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 175 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 234
Query: 264 ADCGHGKAQLEHGLGL 279
AD G+ Q GLG+
Sbjct: 235 ADMGNPVGQ--SGLGM 248
>gi|237735854|ref|ZP_04566335.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229381599|gb|EEO31690.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 742
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-- 148
W + A L+ ++ G+G +L A ++LK A +G + A G Y
Sbjct: 324 WYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQFWLGYFYENH 383
Query: 149 -EMDKKEAAISL-YRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVR 198
E+ S YRQA+ D LG Y +A++L +A+ G+
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ LA C G G+D +L EA R+Y A + GY RA+ N Y GEG+ + H QA K
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNEAVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAFK 503
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATR 297
++AA+ + L H + EG ++ KA+ Y ELA+
Sbjct: 504 LYQKAAEANYAPG-LYHLALAYEEGNGVDVDIDKAIEYYELASH 546
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 21/253 (8%)
Query: 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
P+++ A C W + ++ G ++ G GV++NL KA++ + K A +G
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 139 AMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-------- 185
A + Y ++D E A+ YR A G P NLG Y E V
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNE-AVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAF 502
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
KL +A+ A + Y LAL G GVD ++ +A +Y A+ Y A+YN L Y
Sbjct: 503 KLYQKAAEANYAPGLYHLALAYEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEH 562
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGE 300
E +A K+ + A D +A L L EG+++ KA YL++A G
Sbjct: 563 NEQYH-DDLKAIKYYEAAIDQNDVRAMYRMALYL-DEGKVIAKNPDKAFTYLQIAANQGY 620
Query: 301 TAADHVKNVILQQ 313
A ++ + L+
Sbjct: 621 GPAMNMYGIYLEN 633
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQAAV 165
++ G GV+++ KA + + GA G A+ + G Y E A A++ Y QAA
Sbjct: 200 YELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCY-EYGHGTAVDLTRAVNYYYQAAK 258
Query: 166 LGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG ++LG I E A K +A+ GH R+Q++L C G G +
Sbjct: 259 LGYSEALYSLGTCLEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLGTIQDF 318
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A WY +A++ Y A+ + CY G+G + + AR+ +AA G+ +AQ L
Sbjct: 319 VKAFYWYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQF--WL 376
Query: 278 GLFTE 282
G F E
Sbjct: 377 GYFYE 381
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 78/175 (44%), Gaps = 20/175 (11%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
+AL+ F KGA ++ + G +Y E D +A Y+ A LG+ NL
Sbjct: 140 EALEYFKKGAEVDNSDCVCIIGYLYERGLGVEQDHYQA-FRYYQSATSLGNVVASCNLAY 198
Query: 178 SYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y VK YQ + AG RA L C G G +L A +Y +AA+
Sbjct: 199 FYELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCYEYGHGTAVDLTRAVNYYYQAAK 258
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLG 278
GY A+Y+ C FGEG+ +A K + AA+ GH ++Q E+GLG
Sbjct: 259 LGYSEALYSLGTCLEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLG 313
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE---AAISLYRQAAVLG 167
++ G GV ++DKA++ + + + +A+ + GL+Y ++ AI Y A
Sbjct: 524 YEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEHNEQYHDDLKAIKYYEAAIDQN 583
Query: 168 DPAGQFNLGISYLQE---------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
D + + + YL E +A L A+ G+ A + L G G NL
Sbjct: 584 DVRAMYRMAL-YLDEGKVIAKNPDKAFTYLQIAANQGYGPAMNMYGIYLENGIGGYKNLD 642
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
EA ++YL + YV +YN + CY +G G + A K +A++ G+ A
Sbjct: 643 EAFKYYLASTSDEYVPGIYNLARCYFYGIGTTVDKASAFKLFLKASERGYYDASF 697
>gi|315453384|ref|YP_004073654.1| Sel1-like repeat-containing protein [Helicobacter felis ATCC 49179]
gi|315132436|emb|CBY83064.1| Sel1-like repeat protein [Helicobacter felis ATCC 49179]
Length = 560
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 50/223 (22%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK 153
++A L G + +G+GV K+ KALD F + A G A + G++Y E D
Sbjct: 328 QKAQTLYNLGVVYANGQGVPKDESKALDYFQQSAKLGHAKANYNLGVIYNRGLGVEKDTT 387
Query: 154 EAAISLYRQAAVLGDPAGQFNLG----------------ISYLQE--------------- 182
+A S +++AA LGD +NLG I Y +E
Sbjct: 388 QA-FSYFQEAAKLGDDKAYYNLGVMCEHGRGTPKDIPQAIFYFEEAANMDNINALHHLGS 446
Query: 183 -------------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
A Y+A+ G ++ Y + + +G GV+ ++Q+A + +A++
Sbjct: 447 LYHMGKEVEKDASRAFAYFYRAAQLGSIKDDYNVGVMYSQGDGVEKDMQQALLHFQKASD 506
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
GG AMYN + Y GEG+ ++A + KRAA G+ KAQ
Sbjct: 507 GGSSNAMYNMGVIYYQGEGIDHDLQKAMECFKRAAKFGNQKAQ 549
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 40/274 (14%)
Query: 87 VCKSWNDALRPLREAMVL-----LRW-GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K + AL + A L L + G ++ G GV + KAL+ + + A RGS A+
Sbjct: 112 VKKDYQKALDYFKHAASLDDVNALNYMGLMYRTGNGVGVDYAKALEFYQQAADRGSVKAL 171
Query: 141 VDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQEEAVK--------LL 188
V G M++ M K A A+ ++QAA LGD +NL + Y E V+ L
Sbjct: 172 VSLGSMHYAGQGMAKDFAKALDYFQQAADLGDARASYNLAVMYENGEGVEKDGDKSLELF 231
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
+++ AG +A LA G GV+ ++ +A Y A E G A+ + + Y G+G
Sbjct: 232 KESAQAGFAKATCTLASMYEDGEGVEKDMDKAIALYQEAGEMGDAGALSSLANLYRTGKG 291
Query: 249 LPLSHRQARKWMKRAADCG----------------HGKAQLEHGLG-LFTEGEMM----- 286
+ A + K AAD G + KAQ + LG ++ G+ +
Sbjct: 292 VEQDKYTAIAYYKEAADLGDTQAFANLSAMNTQVNNQKAQTLYNLGVVYANGQGVPKDES 351
Query: 287 KAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
KA+ Y + + + G A++ VI + +D
Sbjct: 352 KALDYFQQSAKLGHAKANYNLGVIYNRGLGVEKD 385
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKE--AAISL 159
L+ G + +GRGV ++ KALD F + A G + V+ G+MY + KK+ A+
Sbjct: 63 LVYLGVMYANGRGVAQDNTKALDYFQQAANLGDSQGFVNLGVMYNLGKGVKKDYQKALDY 122
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGR 211
++ AA L D +G+ Y V + Y QA+ G V+A L + G+
Sbjct: 123 FKHAASLDDVNALNYMGLMYRTGNGVGVDYAKALEFYQQAADRGSVKALVSLGSMHYAGQ 182
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
G+ + +A ++ +AA+ G RA YN ++ Y GEG+ ++ + K +A G KA
Sbjct: 183 GMAKDFAKALDYFQQAADLGDARASYNLAVMYENGEGVEKDGDKSLELFKESAQAGFAKA 242
Query: 272 ------QLEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
E G G+ E +M KA+ + A G+ A
Sbjct: 243 TCTLASMYEDGEGV--EKDMDKAIALYQEAGEMGDAGA 278
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 38/246 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
++ G GV K++DKA+ + + G A+ +Y E DK AI+ Y++AA
Sbjct: 250 YEDGEGVEKDMDKAIALYQEAGEMGDAGALSSLANLYRTGKGVEQDKY-TAIAYYKEAAD 308
Query: 166 LGDPAG------------------QFNLGISYL--------QEEAVKLLYQASIAGHVRA 199
LGD +NLG+ Y + +A+ Q++ GH +A
Sbjct: 309 LGDTQAFANLSAMNTQVNNQKAQTLYNLGVVYANGQGVPKDESKALDYFQQSAKLGHAKA 368
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
Y L + +RG GV+ + +A ++ AA+ G +A YN + G G P QA +
Sbjct: 369 NYNLGVIYNRGLGVEKDTTQAFSYFQEAAKLGDDKAYYNLGVMCEHGRGTPKDIPQAIFY 428
Query: 260 MKRAADCG-----HGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQL 314
+ AA+ H L H +G E + +A Y A + G D+ V+ Q
Sbjct: 429 FEEAANMDNINALHHLGSLYH-MGKEVEKDASRAFAYFYRAAQLGSIKDDYNVGVMYSQG 487
Query: 315 SATSRD 320
+D
Sbjct: 488 DGVEKD 493
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQF 173
++ ++AL S+ A GS+ A+V G+MY A+ ++QAA LGD G
Sbjct: 41 ERHYEEALASYQNAAELGSSRALVYLGVMYANGRGVAQDNTKALDYFQQAANLGDSQGFV 100
Query: 174 NLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
NLG+ Y + VK YQ A+ V A + L G GV + +A +Y
Sbjct: 101 NLGVMYNLGKGVKKDYQKALDYFKHAASLDDVNALNYMGLMYRTGNGVGVDYAKALEFYQ 160
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 279
+AA+ G V+A+ + + G+G+ +A + ++AAD G +A E+G G+
Sbjct: 161 QAADRGSVKALVSLGSMHYAGQGMAKDFAKALDYFQQAADLGDARASYNLAVMYENGEGV 220
Query: 280 FTEGE 284
+G+
Sbjct: 221 EKDGD 225
>gi|303237422|ref|ZP_07323988.1| Sel1 repeat protein [Prevotella disiens FB035-09AN]
gi|302482372|gb|EFL45401.1| Sel1 repeat protein [Prevotella disiens FB035-09AN]
Length = 429
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 23/246 (9%)
Query: 87 VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
+ +++ +AL+ R+A + G ++ G GV+ N+++AL FL+ A +G A
Sbjct: 183 IVQNYEEALKLYRQAAEQGYSESQYKLGVCYQKGTGVKANINEALKWFLRAAQQGYAPAQ 242
Query: 141 VDAGLMYWEMD--KKEAAISLY--RQAAVLGDPAGQFNLGISYLQ--------EEAVKLL 188
D G + + + KK+ +L+ +AA + +N+ +SY E A+
Sbjct: 243 NDYGTYFLDENNPKKDYPTALFWLHKAAEQENAQAMYNIAVSYENGWGVAQSLENAISWY 302
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
+A++AG A Q+ L GRGV + +A +W L+ AE G + +LC G+G
Sbjct: 303 RKAALAGDADAMLQMGLAYADGRGVKQSWTDATQWLLKGAEAGNAESQSYFALCLLQGKG 362
Query: 249 LPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG-ETAA 303
+ ++A KW+++A + G+ A G G E + KA Y + + G E A
Sbjct: 363 IATDAKKAVKWLEKAIEQGNAMAANNLGFCYLNGFGVEKDKEKAKYYFQKSAEMGYELAK 422
Query: 304 DHVKNV 309
++K +
Sbjct: 423 KNLKFI 428
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 186 KLLYQA-SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
K LY++ +I G +QY+LALC G GV N EA +WY ++AE G +A +N Y+
Sbjct: 47 KKLYESLAIMGDAVSQYKLALCYDDGIGVPQNYGEALKWYRKSAEQGVPQAQHNLGFMYA 106
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
G G+ + ++A KW ++AAD H AQ G
Sbjct: 107 LGNGVRQNWKEAAKWFQQAADQDHTLAQFALG 138
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 84/190 (44%), Gaps = 14/190 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G GV +N +AL + K A +G A + G MY + KEAA ++QAA
Sbjct: 69 YDDGIGVPQNYGEALKWYRKSAEQGVPQAQHNLGFMYALGNGVRQNWKEAA-KWFQQAAD 127
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
QF LG Y V+ Y A+ G + A LA G G+ N
Sbjct: 128 QDHTLAQFALGSCYESGNGVEQNYVVAAKYFRAAAAKGLLPAVNALASFYFEGTGIVQNY 187
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+EA + Y +AAE GY + Y +CY G G+ + +A KW RAA G+ AQ ++G
Sbjct: 188 EEALKLYRQAAEQGYSESQYKLGVCYQKGTGVKANINEALKWFLRAAQQGYAPAQNDYGT 247
Query: 278 GLFTEGEMMK 287
E K
Sbjct: 248 YFLDENNPKK 257
>gi|188587674|ref|YP_001921040.1| Sel1 repeat family [Clostridium botulinum E3 str. Alaska E43]
gi|188497955|gb|ACD51091.1| Sel1 repeat family [Clostridium botulinum E3 str. Alaska E43]
Length = 269
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 14/177 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV ++ +KA + F A++G+ A + MY E++ +EA I Y +
Sbjct: 81 GDMYYCGNGVDQDYEKAKEYFGYSASQGNPDAQCNLACMYEEGLGTEINYQEA-IKWYEK 139
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA+ D Q+NLG Y+ + V + Y+ ASI G+ ++Q L +G G++
Sbjct: 140 AALQEDFYAQYNLGNLYMYGKGVDIDYKKAFKWHMKASILGYEKSQNTLGYMYEQGLGIE 199
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
N +EA ++Y +AA Y A YN + Y G G+ + A W ++AA+ G KA
Sbjct: 200 KNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDRKAAYIWYQKAANQGLKKA 256
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLAL 205
E A+ Y ++A G Q+NLG Y E+A + ++ G+ AQ LA
Sbjct: 59 EEAVKWYIKSAEQGYDVAQYNLGDMYYCGNGVDQDYEKAKEYFGYSASQGNPDAQCNLAC 118
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G G + N QEA +WY +AA A YN Y +G+G+ + +++A KW +A+
Sbjct: 119 MYEEGLGTEINYQEAIKWYEKAALQEDFYAQYNLGNLYMYGKGVDIDYKKAFKWHMKASI 178
Query: 266 CGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 319
G+ K+Q E GLG+ E +AV Y + A + A++ + + ++
Sbjct: 179 LGYEKSQNTLGYMYEQGLGI--EKNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQ 236
Query: 320 DR 321
DR
Sbjct: 237 DR 238
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
+AQ L + G + + +EA +WY+++AE GY A YN Y G G+ + +A+
Sbjct: 39 KAQNALGDKYYIGDDIAQDYEEAVKWYIKSAEQGYDVAQYNLGDMYYCGNGVDQDYEKAK 98
Query: 258 KWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELA 295
++ +A G+ AQ E GLG TE +A+ + E A
Sbjct: 99 EYFGYSASQGNPDAQCNLACMYEEGLG--TEINYQEAIKWYEKA 140
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G N +A+ + K A + A + G +Y ++D K+A + +A++
Sbjct: 120 YEEGLGTEINYQEAIKWYEKAALQEDFYAQYNLGNLYMYGKGVDIDYKKA-FKWHMKASI 178
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG Q LG Y Q EEAVK +A+ + A+Y LA + G G+ +
Sbjct: 179 LGYEKSQNTLGYMYEQGLGIEKNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDR 238
Query: 218 QEAARWYLRAAEGGYVRAM 236
+ A WY +AA G +A+
Sbjct: 239 KAAYIWYQKAANQGLKKAI 257
>gi|167757075|ref|ZP_02429202.1| hypothetical protein CLORAM_02624 [Clostridium ramosum DSM 1402]
gi|167703250|gb|EDS17829.1| Sel1 repeat protein [Clostridium ramosum DSM 1402]
Length = 742
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-- 148
W + A L+ ++ G+G +L A ++LK A +G + A G Y
Sbjct: 324 WYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQFWLGYFYENH 383
Query: 149 -EMDKKEAAISL-YRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVR 198
E+ S YRQA+ D LG Y +A++L +A+ G+
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ LA C G G+D +L EA R+Y A + GY RA+ N Y GEG+ + H QA K
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNEAVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAFK 503
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATR 297
++AA+ + L H + EG ++ KA+ Y ELA+
Sbjct: 504 LYQKAAEANYAPG-LYHLALAYEEGNGVDVDIDKAIEYYELASH 546
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 21/253 (8%)
Query: 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
P+++ A C W + ++ G ++ G GV++NL KA++ + K A +G
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 139 AMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-------- 185
A + Y ++D E A+ YR A G P NLG Y E V
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNE-AVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAF 502
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
KL +A+ A + Y LAL G GVD ++ +A +Y A+ Y A+YN L Y
Sbjct: 503 KLYQKAAEANYAPGLYHLALAYEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEH 562
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGE 300
E +A K+ + A D +A L L EG+++ KA YL++A G
Sbjct: 563 NEQYH-DDLKAIKYYEAAIDQNDVRAMYRMALYL-DEGKVIAKNLDKAFTYLQIAANQGY 620
Query: 301 TAADHVKNVILQQ 313
A ++ + L+
Sbjct: 621 GPAMNMYGIYLEN 633
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQAAV 165
++ G GV+++ KA + + GA G A+ + G Y E A A++ Y QAA
Sbjct: 200 YELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCY-EYGHGTAVDLPRAVNYYYQAAK 258
Query: 166 LGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG ++LG I E A K +A+ GH R+Q++L C G G +
Sbjct: 259 LGYSEALYSLGTCLEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLGTIQDF 318
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A WY +A++ Y A+ + CY G+G + + AR+ +AA G+ +AQ L
Sbjct: 319 VKAFYWYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQF--WL 376
Query: 278 GLFTE 282
G F E
Sbjct: 377 GYFYE 381
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 78/175 (44%), Gaps = 20/175 (11%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
+AL+ F KGA ++ + G +Y E D +A Y+ A LG+ NL
Sbjct: 140 EALEYFKKGAEVDNSDCVCIIGYLYERGLGVEQDHYQA-FRYYQSATSLGNVVASCNLAY 198
Query: 178 SYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y VK YQ + AG RA L C G G +L A +Y +AA+
Sbjct: 199 FYELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCYEYGHGTAVDLPRAVNYYYQAAK 258
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLG 278
GY A+Y+ C FGEG+ +A K + AA+ GH ++Q E+GLG
Sbjct: 259 LGYSEALYSLGTCLEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLG 313
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 47/208 (22%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK-----EAAI--- 157
++ G GV ++DKA++ + + + +A+ + GL+Y + D K EAAI
Sbjct: 524 YEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEHNEQYHDDLKAIKYYEAAIDQN 583
Query: 158 ---SLYRQAAVLGDP---AGQFNLGISYLQ----------------------------EE 183
++YR A L + A + +YLQ +E
Sbjct: 584 DVRAMYRMALYLDEGKVIAKNLDKAFTYLQIAANQGYGPAMNMYGIYLENGIGGYKNLDE 643
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A K ++ +V Y LA C G G + A + +L+A+E GY A + Y
Sbjct: 644 AFKYYLASTSDEYVPGIYNLARCYFYGIGTTVDKASAFKLFLKASERGYYDASFMIGYMY 703
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKA 271
S+G+G+ ++A+++ K+AA+ G +A
Sbjct: 704 SYGDGINQDKQKAKEYFKQAANKGMKEA 731
>gi|148358886|ref|YP_001250093.1| TPR repeat-containing protein [Legionella pneumophila str. Corby]
gi|296106934|ref|YP_003618634.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
gi|148280659|gb|ABQ54747.1| TPR repeat protein [Legionella pneumophila str. Corby]
gi|295648835|gb|ADG24682.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
Length = 376
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 20/221 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQY-MMGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAGQFNLGISYLQEE---------AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA GD G+++LG+ Y +E A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
D + +AA WY AAE G A G G+ ++QA W ++A G+ Q
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQA 305
Query: 274 EHGL----GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 309
+ G GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+S EA K +A+ G+ AQ + L G GV +
Sbjct: 95 -------------DTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDD 141
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A W+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LG
Sbjct: 142 KAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLG 199
Query: 279 LFTEGE 284
L G+
Sbjct: 200 LLYTGQ 205
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q+ G++ EEA +A+ + AQ L G+GV + EA +WY++AAE G
Sbjct: 59 QYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQG 118
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMK 287
A N L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ K
Sbjct: 119 NPIAQRNIGLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Query: 288 AVVYLELATRAGETAADHVKNVIL--QQLSATSRDRAML 324
A + + A G+ ++ ++ Q+ ++ D+A
Sbjct: 179 AFEWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKAAF 217
>gi|299541678|ref|ZP_07052008.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZC1]
gi|298725773|gb|EFI66407.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZC1]
Length = 638
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 89/179 (49%), Gaps = 19/179 (10%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKEAAISLYRQAAVLGDPAGQFNLG 176
+NL A L A G A + G +Y ++++ A+S +R AA G Q+ LG
Sbjct: 407 EQNLVSAEKWLLLAADNGHISAGFELGRLYAYQLEDPVKAMSYFRTAAEKGYADAQYELG 466
Query: 177 ----------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
I+Y +EAVK A+ H++A+YQL L +G GV NL+EA R Y
Sbjct: 467 LLLTSGTGVPINY--KEAVKWWRAATDQSHIQAEYQLGLLYEQGLGVALNLEEARRCYRL 524
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGL 279
AA G+ A Y + G+G+ + +A KW+++AA GH KAQ + HG G+
Sbjct: 525 AATQGHAGAQYQLGNLFDKGKGVEQDYTEAAKWIEQAASQGHMKAQYQLAQMHIHGQGV 583
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G+ +N ++A + A +G+T A + G +Y + A++ ++ A
Sbjct: 257 GVLYNQGLGLSQNFNEAAKWYTLAANQGNTSAQNNLGFLYHNGTGVEQNYDKAVAYFKMA 316
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
A+ GD + Q+NLG +L +G G+ N +EAA+W
Sbjct: 317 ALTGDASAQYNLGYMHL----------------------------KGCGIPQNQEEAAKW 348
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
+ AA +V A + ++ Y+ G+G+ H +A KW K AA GH AQ GL E
Sbjct: 349 FHMAALQDHVNAEFQLAMLYNTGQGMTKDHIEALKWFKLAAHKGHLNAQYCLGLLYEKEQ 408
Query: 284 EMMKAVVYLELATRAGETAA 303
++ A +L LA G +A
Sbjct: 409 NLVSAEKWLLLAADNGHISA 428
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-------KLLYQ-ASIAGHVRAQYQLAL 205
E A+ + AA GD + Q+NLG Y V K+ Y+ A+ A Y L +
Sbjct: 163 EHAVKWFEVAAQNGDASAQYNLGALYNHGRGVEKDYRLAKMWYERAAAQNDANAHYSLGV 222
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
H G+GV + EAAR Y AA+ A YN + Y+ G GL + +A KW AA+
Sbjct: 223 LYHLGQGVIQDYLEAARHYQIAADLENADAQYNLGVLYNQGLGLSQNFNEAAKWYTLAAN 282
Query: 266 CGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 305
G+ AQ G G E KAV Y ++A G+ +A +
Sbjct: 283 QGNTSAQNNLGFLYHNGTGVEQNYDKAVAYFKMAALTGDASAQY 326
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G GV N +A+ + + A GL+Y + E A YR AA G
Sbjct: 472 GTGVPINYKEAVKWWRAATDQSHIQAEYQLGLLYEQGLGVALNLEEARRCYRLAATQGHA 531
Query: 170 AGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+ LG + EA K + QA+ GH++AQYQLA G+GV + +AA
Sbjct: 532 GAQYQLGNLFDKGKGVEQDYTEAAKWIEQAASQGHMKAQYQLAQMHIHGQGVPKDFAKAA 591
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
+ Y +A G+ +A + + Y G G+ +++A +W+K++
Sbjct: 592 QLYRLSANQGHQKAQFQLGMLYKKGHGVAQDYQEATRWLKKS 633
>gi|365830265|ref|ZP_09371848.1| hypothetical protein HMPREF1021_00612 [Coprobacillus sp. 3_3_56FAA]
gi|365263647|gb|EHM93473.1| hypothetical protein HMPREF1021_00612 [Coprobacillus sp. 3_3_56FAA]
Length = 742
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-- 148
W + A L+ ++ G+G +L A ++LK A +G + A G Y
Sbjct: 324 WYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQFWLGYFYENH 383
Query: 149 -EMDKKEAAISL-YRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVR 198
E+ S YRQA+ D LG Y +A++L +A+ G+
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ LA C G G+D +L EA R+Y A + GY RA+ N Y GEG+ + H QA K
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNEAVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAFK 503
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATR 297
++AA+ + L H + EG ++ KA+ Y ELA+
Sbjct: 504 LYQKAAEANYAPG-LYHLALAYEEGNGVDVDIDKAIEYYELASH 546
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 21/253 (8%)
Query: 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
P+++ A C W + ++ G ++ G GV++NL KA++ + K A +G
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 139 AMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-------- 185
A + Y ++D E A+ YR A G P NLG Y E V
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNE-AVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAF 502
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
KL +A+ A + Y LAL G GVD ++ +A +Y A+ Y A+YN L Y
Sbjct: 503 KLYQKAAEANYAPGLYHLALAYEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEH 562
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGE 300
E +A K+ + A D +A L L EG+++ KA YL++A G
Sbjct: 563 NEQYH-DDLKAIKYYEAAIDQNDVRAMYRMALYL-DEGKVIAKNLDKAFTYLQIAANQGY 620
Query: 301 TAADHVKNVILQQ 313
A ++ + L+
Sbjct: 621 GPAMNMYGIYLEN 633
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQAAV 165
++ G GV+++ KA + + GA G A+ + G Y E A A++ Y QAA
Sbjct: 200 YELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCY-EYGHGTAVDLPRAVNYYYQAAK 258
Query: 166 LGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG ++LG I E A K +A+ GH R+Q++L C G G +
Sbjct: 259 LGYSEALYSLGTCLEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLGTIQDF 318
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A WY +A++ Y A+ + CY G+G + + AR+ +AA G+ +AQ L
Sbjct: 319 VKAFYWYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQF--WL 376
Query: 278 GLFTE 282
G F E
Sbjct: 377 GYFYE 381
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 78/175 (44%), Gaps = 20/175 (11%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
+AL+ F KGA ++ + G +Y E D +A Y+ A LG+ NL
Sbjct: 140 EALEYFKKGAEVDNSDCVCIIGYLYERGLGVEQDHYQA-FRYYQSATSLGNVVASCNLAY 198
Query: 178 SYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y VK YQ + AG RA L C G G +L A +Y +AA+
Sbjct: 199 FYELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCYEYGHGTAVDLPRAVNYYYQAAK 258
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLG 278
GY A+Y+ C FGEG+ +A K + AA+ GH ++Q E+GLG
Sbjct: 259 LGYSEALYSLGTCLEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLG 313
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 47/208 (22%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK-----EAAI--- 157
++ G GV ++DKA++ + + + +A+ + GL+Y + D K EAAI
Sbjct: 524 YEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEHNEQYHDDLKAIKYYEAAIDQN 583
Query: 158 ---SLYRQAAVLGDP---AGQFNLGISYLQ----------------------------EE 183
++YR A L + A + +YLQ +E
Sbjct: 584 DVRAMYRMALYLDEGKVIAKNLDKAFTYLQIAANQGYGPAMNMYGIYLENGIGGYKNLDE 643
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A K ++ +V Y LA C G G + A + +L+A+E GY A + Y
Sbjct: 644 AFKCYLASTSDEYVPGIYNLARCYFYGIGTTVDKASAFKLFLKASERGYYDASFMIGYMY 703
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKA 271
S+G+G+ ++A+++ K+AA+ G +A
Sbjct: 704 SYGDGINQDKQKAKEYFKQAANKGMKEA 731
>gi|237748051|ref|ZP_04578531.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379413|gb|EEO29504.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 511
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
AM L + G GVRKN +A + + K A + A G +Y + ++ KE
Sbjct: 139 NAMAQLYVAYMLEKGLGVRKNDREAFNWYKKAAEQNVPNAQYKLGTLYEKGIGTRINLKE 198
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALC 206
A ++ YR+AA G Q LG Y + EA + Y A+ G V AQ LA
Sbjct: 199 A-LNWYRKAAEGGLSGAQVKLGRLYSEGIGVKRDYTEAARWFYPAAEKGDVMAQTALAFL 257
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G GV + A WY +AAE G+ A N Y G G+ + ARKW + AA
Sbjct: 258 FENGLGVQQDDAFAISWYSKAAEKGFAPAQNNLGYLYDNGIGVLRDYTTARKWYEAAAKQ 317
Query: 267 GHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 303
G+ +AQ G LG T + KA +LE A G A
Sbjct: 318 GNVEAQFNLGQLYTLGHGTVQDYGKAAEWLEKAAAKGHPKA 358
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLY 160
++ G+ + G GV+++ +A F A +G +A ++ + + +A AIS Y
Sbjct: 216 VKLGRLYSEGIGVKRDYTEAARWFYPAAEKGDVMAQTALAFLFENGLGVQQDDAFAISWY 275
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA----------GHVRAQYQLALCLHRG 210
+AA G Q NLG YL + + +L + A G+V AQ+ L G
Sbjct: 276 SKAAEKGFAPAQNNLG--YLYDNGIGVLRDYTTARKWYEAAAKQGNVEAQFNLGQLYTLG 333
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
G + +AA W +AA G+ +A+ N + G G+P+ +A ++ ++AA G+
Sbjct: 334 HGTVQDYGKAAEWLEKAAAKGHPKALNNLGMASLDGMGVPMDRVKAGEYFRKAALLGNAH 393
Query: 271 AQ 272
AQ
Sbjct: 394 AQ 395
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 175 LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
LG+ QE+A +A+ + AQ +A L +G GV N +EA WY +AAE
Sbjct: 118 LGVDVNQEKAFDWYLKAAKQNNAMAQLYVAYMLEKGLGVRKNDREAFNWYKKAAEQNVPN 177
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAV 289
A Y Y G G ++ ++A W ++AA+ G AQ++ G L++EG + +A
Sbjct: 178 AQYKLGTLYEKGIGTRINLKEALNWYRKAAEGGLSGAQVKLGR-LYSEGIGVKRDYTEAA 236
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
+ A G+ A + + +D A + SW
Sbjct: 237 RWFYPAAEKGDVMAQTALAFLFENGLGVQQDDAFAI--SW 274
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 12/145 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
F++G GV+++ A+ + K A +G A + G +Y + A Y AA
Sbjct: 258 FENGLGVQQDDAFAISWYSKAAEKGFAPAQNNLGYLYDNGIGVLRDYTTARKWYEAAAKQ 317
Query: 167 GDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ QFNLG Y +Q+ +A + L +A+ GH +A L + G GV +
Sbjct: 318 GNVEAQFNLGQLYTLGHGTVQDYGKAAEWLEKAAAKGHPKALNNLGMASLDGMGVPMDRV 377
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCY 243
+A ++ +AA G A YN + Y
Sbjct: 378 KAGEYFRKAALLGNAHAQYNLATLY 402
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 14/166 (8%)
Query: 152 KKEAAISLYRQAAVLGDPA-GQFNL-----GISYLQE----EAVKLLYQASIAGHVRAQY 201
K+ + L+ A L +PA GQ + GI QE EA+ L Q
Sbjct: 49 KRAIPVLLFSFMASLSNPAAGQTDADAKTEGIRLYQEKKYIEALPYLNAPDAQKDPLVQS 108
Query: 202 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261
L G GVD N ++A WYL+AA+ A + G G+ + R+A W K
Sbjct: 109 ALGNMFSMGLGVDVNQEKAFDWYLKAAKQNNAMAQLYVAYMLEKGLGVRKNDREAFNWYK 168
Query: 262 RAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
+AA+ AQ + G G+ T + +A+ + A G + A
Sbjct: 169 KAAEQNVPNAQYKLGTLYEKGIGTRINLKEALNWYRKAAEGGLSGA 214
>gi|449128595|ref|ZP_21764841.1| hypothetical protein HMPREF9733_02244 [Treponema denticola SP33]
gi|448941003|gb|EMB21907.1| hypothetical protein HMPREF9733_02244 [Treponema denticola SP33]
Length = 544
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +K G GV +N +A+ + K A +G A + G MY E+A+ YR+A
Sbjct: 130 GFMYKEGLGVEQNYKQAVYWYSKAAEQGLYEAQNNLGFMYKTGRGIEQSYESAVYWYRKA 189
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A QFNLG Y E+A + ++A+ G +AQ +L H G GV+
Sbjct: 190 AEKDLAEAQFNLGNMYFDGLGLAKNHEQAAEWYFKAAEQGLAKAQNKLGWMYHNGIGVEQ 249
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N ++A W+ +AAE G ++ Y G G+ +++A +W +AAD G +AQ
Sbjct: 250 NDEKAVYWHRKAAEQGDAEGQFSLGWLYYQGIGVKKDYKKASEWFGKAADQGLTEAQ 306
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
+ G+GV ++ + A + K A +G LA + M+ E E A+ Y+++A
Sbjct: 61 YYEGKGVTQSYETAAYWYRKAAKQGHILAQNNLADMFAEGKGVEQSYKQAVYWYKKSAEQ 120
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q NLG Y + ++AV +A+ G AQ L GRG++ + +
Sbjct: 121 GHAWAQNNLGFMYKEGLGVEQNYKQAVYWYSKAAEQGLYEAQNNLGFMYKTGRGIEQSYE 180
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 277
A WY +AAE A +N Y G GL +H QA +W +AA+ G KAQ + G
Sbjct: 181 SAVYWYRKAAEKDLAEAQFNLGNMYFDGLGLAKNHEQAAEWYFKAAEQGLAKAQNKLGWM 240
Query: 278 ---GLFTEGEMMKAVVYLELATRAGE 300
G+ E KAV + A G+
Sbjct: 241 YHNGIGVEQNDEKAVYWHRKAAEQGD 266
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 22/235 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
F G+GV ++ +A+ + K A +G A + G MY E + A+ Y +AA
Sbjct: 97 FAEGKGVEQSYKQAVYWYKKSAEQGHAWAQNNLGFMYKEGLGVEQNYKQAVYWYSKAAEQ 156
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASIAGH--------VRAQYQLALCLHRGRGVDFNLQ 218
G Q NLG Y ++ Y++++ + AQ+ L G G+ N +
Sbjct: 157 GLYEAQNNLGFMYKTGRGIEQSYESAVYWYRKAAEKDLAEAQFNLGNMYFDGLGLAKNHE 216
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 277
+AA WY +AAE G +A Y G G+ + +A W ++AA+ G + Q G
Sbjct: 217 QAAEWYFKAAEQGLAKAQNKLGWMYHNGIGVEQNDEKAVYWHRKAAEQGDAEGQFSLGWL 276
Query: 278 ---GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA--MLVVD 327
G+ + + KA + A G T A L++L A + +L++D
Sbjct: 277 YYQGIGVKKDYKKASEWFGKAADQGLTEA----QAKLKELEAQIKKNTNPLLIID 327
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
+ + +++L + + G +Q +LA + G+GV + + AA WY +AA+ G++ A N +
Sbjct: 35 ETDEIRILQKEAEKGLAESQNKLAGLYYEGKGVTQSYETAAYWYRKAAKQGHILAQNNLA 94
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELAT 296
++ G+G+ S++QA W K++A+ GH AQ G GL E +AV + A
Sbjct: 95 DMFAEGKGVEQSYKQAVYWYKKSAEQGHAWAQNNLGFMYKEGLGVEQNYKQAVYWYSKAA 154
Query: 297 RAG 299
G
Sbjct: 155 EQG 157
>gi|408379852|ref|ZP_11177443.1| hemaglutinin protein [Agrobacterium albertimagni AOL15]
gi|407746229|gb|EKF57754.1| hemaglutinin protein [Agrobacterium albertimagni AOL15]
Length = 1261
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GDP F +G Y + EA K A+ G AQY+LA L +G GV
Sbjct: 992 AAKNGDPVALFEIGARYTEGRGVKNDFAEAAKWYRLAADKGFAPAQYRLANFLEKGTGVA 1051
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N+ +A R+Y AA G AM+N ++ Y+ G+ + +A +W +AAD G +Q
Sbjct: 1052 PNIGDAKRYYEMAANAGNASAMHNLAVIYASGKDGAQDYAKAVEWFGKAADYGISDSQFN 1111
Query: 275 HGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
+ G T +++ + + +A + G+T A ++ + L +RA VD W+
Sbjct: 1112 LAILSARGNGTAPDLVTSYKWFAIAAKGGDTDAAQKRDEVANALKPGELERARAEVDLWK 1171
Query: 331 A 331
A
Sbjct: 1172 A 1172
>gi|374626152|ref|ZP_09698566.1| hypothetical protein HMPREF0978_01886 [Coprobacillus sp.
8_2_54BFAA]
gi|373914678|gb|EHQ46493.1| hypothetical protein HMPREF0978_01886 [Coprobacillus sp.
8_2_54BFAA]
Length = 742
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-- 148
W + A L+ ++ G+G +L A ++LK A +G + A G Y
Sbjct: 324 WYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQFWLGYFYENH 383
Query: 149 -EMDKKEAAISL-YRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVR 198
E+ S YRQA+ D LG Y +A++L +A+ G+
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ LA C G G+D +L EA R+Y A + GY RA+ N Y GEG+ + H QA K
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNEAVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAFK 503
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATR 297
++AA+ + L H + EG ++ KA+ Y ELA+
Sbjct: 504 LYQKAAEANYAPG-LYHLALAYEEGNGVDVDIDKAIEYYELASH 546
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 21/253 (8%)
Query: 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
P+++ A C W + ++ G ++ G GV++NL KA++ + K A +G
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 139 AMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-------- 185
A + Y ++D E A+ YR A G P NLG Y E V
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNE-AVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAF 502
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
KL +A+ A + Y LAL G GVD ++ +A +Y A+ Y A+YN L Y
Sbjct: 503 KLYQKAAEANYAPGLYHLALAYEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEH 562
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGE 300
E +A K+ + A D +A L L EG+++ KA YL++A G
Sbjct: 563 NEQYH-DDLKAIKYYEAAIDQNDVRAMYRMALYL-DEGKVIAKNLDKAFTYLQIAANQGY 620
Query: 301 TAADHVKNVILQQ 313
A ++ + L+
Sbjct: 621 GPAMNMYGIYLEN 633
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
+AL+ F KGA ++ + G +Y E D +A Y+ A LG+ NL
Sbjct: 140 EALEYFKKGAEVDNSDCVCIIGYLYERGLGVEQDHYQA-FRYYQSATSLGNVVASCNLAY 198
Query: 178 SYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y VK YQ + AG RA L C G G +L A +Y +AA+
Sbjct: 199 FYELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCYEYGHGAAVDLPRAVNYYYQAAK 258
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLG 278
GY A+Y+ C+ FGEG+ +A K + AA+ GH ++Q E+GLG
Sbjct: 259 LGYSEALYSLGTCFEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLG 313
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQAAV 165
++ G GV+++ KA + + GA G A+ + G Y E A A++ Y QAA
Sbjct: 200 YELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCY-EYGHGAAVDLPRAVNYYYQAAK 258
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG ++LG + E A K +A+ GH R+Q++L C G G +
Sbjct: 259 LGYSEALYSLGTCFEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLGTIQDF 318
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A WY +A++ Y A+ + CY G+G + + AR+ +AA G+ +AQ L
Sbjct: 319 VKAFYWYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQF--WL 376
Query: 278 GLFTE 282
G F E
Sbjct: 377 GYFYE 381
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 47/208 (22%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK-----EAAI--- 157
++ G GV ++DKA++ + + + +A+ + GL+Y + D K EAAI
Sbjct: 524 YEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEHNEQYHDDLKAIKYYEAAIDQN 583
Query: 158 ---SLYRQAAVLGDP---AGQFNLGISYLQ----------------------------EE 183
++YR A L + A + +YLQ +E
Sbjct: 584 DVRAMYRMALYLDEGKVIAKNLDKAFTYLQIAANQGYGPAMNMYGIYLENGIGGYKNLDE 643
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A K ++ +V Y LA C G G + A + +L+A+E GY A + Y
Sbjct: 644 AFKYYLASTSDEYVPGIYNLARCYFYGIGTTVDKASAFKLFLKASERGYYDASFMIGYMY 703
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKA 271
S+G+G+ ++A+++ K+AA+ G +A
Sbjct: 704 SYGDGINQDKQKAKEYFKQAANKGMKEA 731
>gi|54294242|ref|YP_126657.1| hypothetical protein lpl1307 [Legionella pneumophila str. Lens]
gi|53754074|emb|CAH15547.1| hypothetical protein lpl1307 [Legionella pneumophila str. Lens]
Length = 376
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 20/221 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVTASDDKAFTWFKKAAEQGYSKAQVNLGYQYM-MGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAGQFNLGISYLQEE---------AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA GD G+++LG+ Y +E A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
D + +AA WY AAE G A G G+ ++QA W ++A G+ Q
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQA 305
Query: 274 EHGL----GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 309
+ G GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 28/186 (15%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNDALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+S EA K +A+ G+ AQ + L G GV +
Sbjct: 95 -------------DTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVTASDD 141
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A W+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LG
Sbjct: 142 KAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLG 199
Query: 279 LFTEGE 284
L G+
Sbjct: 200 LLYTGQ 205
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q+ G++ EEA +A+ AQ L G+GV + EA +WY++AAE G
Sbjct: 59 QYGYGVTTNYEEARNWYQKAADKNDALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQG 118
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMK 287
A N L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ K
Sbjct: 119 NPIAQRNIGLMYATGDGVTASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Query: 288 AVVYLELATRAGETAADHVKNVIL--QQLSATSRDRA 322
A + + A G+ ++ ++ Q+ ++ D+A
Sbjct: 179 AFEWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKA 215
>gi|406915363|gb|EKD54450.1| hypothetical protein ACD_60C00079G0003 [uncultured bacterium]
Length = 467
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 98/235 (41%), Gaps = 26/235 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G+GV K KA F A +G A G+MY DK + A Y +
Sbjct: 183 GLMYYTGQGVSKEDGKAFSWFNLAAEQGLPKAQFMLGVMYSLGRAVPTDKTQ-AFYWYNK 241
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G P Q+NLGI Y AV + +A+ RAQY + G GV
Sbjct: 242 AAQAGLPEAQYNLGILYYNGSGTTVNLNSAVSWIKKAADQDDARAQYFWGYLTYNGIGVA 301
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N+Q+A WY +AA G+ A + Y G G+ RQA W AA G AQ
Sbjct: 302 KNIQQAIDWYEKAAGQGFSEAQFALGFLYHNGLGVAKDDRQAFSWYMAAAKQGLANAQ-- 359
Query: 275 HGLGLFTEGEM-----MKAVVYLELATRAGETAADHVK---NVILQQLSATSRDR 321
+ +GLF + M KA Y T A E D+ + V+ Q SRD
Sbjct: 360 YMVGLFYQQGMGVISDPKAAAYWY--TEAAEQGMDNAQLLLGVMYSQGQGISRDN 412
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 102/247 (41%), Gaps = 43/247 (17%)
Query: 85 SLVCKSWNDALR---PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
S+ +N A + PL + M+ G +G G+ +NL+ ALD + K AA G A
Sbjct: 125 SMAVTLYNQAAKNNNPLAQYML----GYLAANGFGMTQNLNTALDWYSKAAAAGVPEAQY 180
Query: 142 DAGLMYWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHV 197
+ GLMY+ + K++ A S + AA G P QF LG+ Y
Sbjct: 181 NLGLMYYTGQGVSKEDGKAFSWFNLAAEQGLPKAQFMLGVMY------------------ 222
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
GR V + +A WY +AA+ G A YN + Y G G ++ A
Sbjct: 223 ----------SLGRAVPTDKTQAFYWYNKAAQAGLPEAQYNLGILYYNGSGTTVNLNSAV 272
Query: 258 KWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
W+K+AAD +AQ G G+ + +A+ + E A G + A +
Sbjct: 273 SWIKKAADQDDARAQYFWGYLTYNGIGVAKNIQQAIDWYEKAAGQGFSEAQFALGFLYHN 332
Query: 314 LSATSRD 320
++D
Sbjct: 333 GLGVAKD 339
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 150 MDKK-EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
+DKK E A++ Y +A+ G P QF + Y AV L QA+ + AQ
Sbjct: 84 VDKKPELAVAWYMKASSQGLPEAQFAMATLYYYGVGVEQGLSMAVTLYNQAAKNNNPLAQ 143
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y L G G+ NL A WY +AA G A YN L Y G+G+ +A W
Sbjct: 144 YMLGYLAANGFGMTQNLNTALDWYSKAAAAGVPEAQYNLGLMYYTGQGVSKEDGKAFSWF 203
Query: 261 KRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSA 316
AA+ G KAQ G LG + +A + A +AG A + ++ S
Sbjct: 204 NLAAEQGLPKAQFMLGVMYSLGRAVPTDKTQAFYWYNKAAQAGLPEAQYNLGILYYNGSG 263
Query: 317 TSRD 320
T+ +
Sbjct: 264 TTVN 267
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 24/162 (14%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166
WG +G GV KN+ +A+D + K A +G + A G +Y
Sbjct: 290 WGYLTYNGIGVAKNIQQAIDWYEKAAGQGFSEAQFALGFLY------------------- 330
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
LG++ +A A+ G AQY + L +G GV + + AA WY
Sbjct: 331 -----HNGLGVAKDDRQAFSWYMAAAKQGLANAQYMVGLFYQQGMGVISDPKAAAYWYTE 385
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
AAE G A + YS G+G+ ++ A W A+ +
Sbjct: 386 AAEQGMDNAQLLLGVMYSQGQGISRDNQAAYAWFDLASTSSN 427
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 70/180 (38%), Gaps = 12/180 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLAL 205
+ A S+Y A P ++ L G+ E AV +AS G AQ+ +A
Sbjct: 53 QKAFSIYEHFAEGNVPVAEYQLAYLYQNGLGVDKKPELAVAWYMKASSQGLPEAQFAMAT 112
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ G GV+ L A Y +AA+ A Y + G G+ + A W +AA
Sbjct: 113 LYYYGVGVEQGLSMAVTLYNQAAKNNNPLAQYMLGYLAANGFGMTQNLNTALDWYSKAAA 172
Query: 266 CGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
G +AQ GL +T E KA + LA G A + V+ A D+
Sbjct: 173 AGVPEAQYNLGLMYYTGQGVSKEDGKAFSWFNLAAEQGLPKAQFMLGVMYSLGRAVPTDK 232
>gi|422007128|ref|ZP_16354114.1| hypothetical protein OOC_03252 [Providencia rettgeri Dmel1]
gi|414097018|gb|EKT58673.1| hypothetical protein OOC_03252 [Providencia rettgeri Dmel1]
Length = 267
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 14/189 (7%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLAL 205
+AA + +A G+ QF LG ++ V+ Y QA+ G RA+ +A+
Sbjct: 71 KAAAEWFIKAGNQGNSDAQFRLGTMFVNGFGVRRDYDKAMLWYEQAAAQGDTRAETNMAM 130
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+G GV NL++AA W+ +AA+GG + A + YS G G+ L +A W ++AA
Sbjct: 131 MYAQGLGVTQNLEKAAFWFRKAAQGGNILAQFQIGQMYSIGSGVDLDDEKAVFWFRKAAK 190
Query: 266 CGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
K+Q G+ +++EG + +A +L A +G + ++N I +QLS
Sbjct: 191 QKDAKSQDRLGV-MYSEGRGVKKNLQQAYAWLATAVYSGNAESHRLQNKIAEQLSPEELQ 249
Query: 321 RAMLVVDSW 329
+A + + +
Sbjct: 250 QAQKLAEGY 258
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 24/167 (14%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G F +G GVR++ DKA+ + + AA+G T A + +MY +
Sbjct: 90 FRLGTMFVNGFGVRRDYDKAMLWYEQAAAQGDTRAETNMAMMYAQ--------------- 134
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
LG++ E+A +A+ G++ AQ+Q+ G GVD + ++A W+
Sbjct: 135 ---------GLGVTQNLEKAAFWFRKAAQGGNILAQFQIGQMYSIGSGVDLDDEKAVFWF 185
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+AA+ ++ + YS G G+ + +QA W+ A G+ ++
Sbjct: 186 RKAAKQKDAKSQDRLGVMYSEGRGVKKNLQQAYAWLATAVYSGNAES 232
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
QE +++ + Q + G +AQ+QL +G GV + + AA W+++A G A +
Sbjct: 34 QEPSIEQITQLAQKGDPKAQFQLGERYFKGLGVSQDSKAAAEWFIKAGNQGNSDAQFRLG 93
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELAT 296
+ G G+ + +A W ++AA G +A+ + + GL + KA + A
Sbjct: 94 TMFVNGFGVRRDYDKAMLWYEQAAAQGDTRAETNMAMMYAQGLGVTQNLEKAAFWFRKAA 153
Query: 297 RAGETAA 303
+ G A
Sbjct: 154 QGGNILA 160
>gi|335041823|ref|ZP_08534850.1| sel1 domain protein repeat-containing protein [Methylophaga
aminisulfidivorans MP]
gi|333788437|gb|EGL54319.1| sel1 domain protein repeat-containing protein [Methylophaga
aminisulfidivorans MP]
Length = 356
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 18/230 (7%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAG 171
V+++ KA + F K A RGS +A + G M E D K AA + +A G
Sbjct: 109 VKRDQKKAFELFKKSAERGSAVAQFNVGAMLMNGQGVEKDLK-AAADWFEKAGEQGHSQA 167
Query: 172 QFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
QFNLG+ YL VK +++ +G+ AQY++A L G G + +A W
Sbjct: 168 QFNLGLLYLSGSGVKQDTKRAYSWFKRSAESGYPNAQYRVAKMLFDGDGAALDHVQAKSW 227
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GL 279
+L+A E V A + G G + AR W AA AQ GL G
Sbjct: 228 FLKAQENNSVEAAFMLGFMSYLGLGGSQDNLMARHWFDVAAKGWDRNAQFYLGLMNQRGD 287
Query: 280 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
+ +++A + +LA +G A + ++ + LSA R +A + W
Sbjct: 288 GEQKNLLEAYKWFDLAASSGHEDAHYYRSAVAAALSAEQRQQASQLAQQW 337
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYL----------QEEAVKLLYQASIAGHVRAQYQL 203
++A+S AA G + LG+ Y Q++A +L +++ G AQ+ +
Sbjct: 76 DSAMSWLDIAAQKGHDEAAYALGMLYYTGNEPDVKRDQKKAFELFKKSAERGSAVAQFNV 135
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
L G+GV+ +L+ AA W+ +A E G+ +A +N L Y G G+ ++A W KR+
Sbjct: 136 GAMLMNGQGVEKDLKAAADWFEKAGEQGHSQAQFNLGLLYLSGSGVKQDTKRAYSWFKRS 195
Query: 264 ADCGHGKAQ 272
A+ G+ AQ
Sbjct: 196 AESGYPNAQ 204
>gi|422008297|ref|ZP_16355281.1| hypothetical protein OOC_09341 [Providencia rettgeri Dmel1]
gi|414094770|gb|EKT56433.1| hypothetical protein OOC_09341 [Providencia rettgeri Dmel1]
Length = 342
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV----DAGLMYWEMDKKEAAI 157
+ L W ++ G+ V K+ KA +L A + A+ A + ++ A
Sbjct: 152 LTLAYW---YEEGKAVTKDPQKAQKIYLALAEKNHPQALYLLGYQAAVGMYDKVNYPLAF 208
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR 209
+ +AA LG Q +LG+ YL + A+K L QA+ G V AQ+ +AL R
Sbjct: 209 QYFTRAAELGFSPAQNSLGMLYLTGQGTPKNTQSAIKWLTQAAEQGEVSAQFNVALIYAR 268
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
G G+ N +A W+++AA+ V A Y CY +G G+ ++A +W + AA GH
Sbjct: 269 GDGIKANQAKACHWFIKAAQQNSVDAQYAAGACYQYGMGVEADDKKALRWYQLAAAKGHE 328
Query: 270 KAQ 272
+A+
Sbjct: 329 RAE 331
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNL 175
D+AL +L A +G T A ++ GLMY + +D+K+ + R AA GDP GQ N+
Sbjct: 58 FDQALHWYLLSANQGFTKAQINLGLMYQQGTGVKLDEKQMLHWMSR-AAENGDPIGQMNM 116
Query: 176 ------GISYL----QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G+ L E+A + L +A+ A LA G+ V + Q+A + YL
Sbjct: 117 AEYTLYGLDNLLEKNPEKAEQWLEKAAEQHFQPAMLTLAYWYEEGKAVTKDPQKAQKIYL 176
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFT 281
AE + +A+Y + G +++ A ++ RAA+ G AQ G+ G T
Sbjct: 177 ALAEKNHPQALYLLGYQAAVGMYDKVNYPLAFQYFTRAAELGFSPAQNSLGMLYLTGQGT 236
Query: 282 EGEMMKAVVYLELATRAGETAADHVKNVIL 311
A+ +L A GE +A NV L
Sbjct: 237 PKNTQSAIKWLTQAAEQGEVSAQF--NVAL 264
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 182 EEAVKLLYQASIA-----GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
EEA L+ + ++ G AQ+ L + D +A WYL +A G+ +A
Sbjct: 22 EEATPLINEKTLIALAEQGQAEAQFNLGMFYQSHHQFD----QALHWYLLSANQGFTKAQ 77
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVV 290
N L Y G G+ L +Q WM RAA+ G Q+ +GL E KA
Sbjct: 78 INLGLMYQQGTGVKLDEKQMLHWMSRAAENGDPIGQMNMAEYTLYGLDNLLEKNPEKAEQ 137
Query: 291 YLELATR 297
+LE A
Sbjct: 138 WLEKAAE 144
>gi|296120929|ref|YP_003628707.1| Sel1 domain-containing protein repeat-containing protein
[Planctomyces limnophilus DSM 3776]
gi|296013269|gb|ADG66508.1| Sel1 domain protein repeat-containing protein [Planctomyces
limnophilus DSM 3776]
Length = 512
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 13/172 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDP 169
G GV KN+ + A RG+ LAM G +Y AI Y +AA LG P
Sbjct: 264 GSGVAKNVQTCQTHYRTAADRGNALAMKRLGDLYLNNQALPRDLPKAIEWYEKAAKLGQP 323
Query: 170 AGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNLQEA 220
+G+ Y+ +++A++ Q++ AG+ A A GRG V N +
Sbjct: 324 DALNTMGVLYVTGTGVTLDEKKALEYFLQSANAGNPLAMLHAAKFFAMGRGGVKQNFKTY 383
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A W ++A+ GY MY LC+++G+G+ + + A W+++AAD G+ +A+
Sbjct: 384 AAWVRKSADLGYPEGMYEYGLCFAYGDGVKRNDKTAALWIRKAADAGYAQAK 435
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV---DAGLMYWEMDKK-EA 155
EAM LL G ++ G G N A++ + K AA T MV D L+ + K +
Sbjct: 216 EAMTLL--GHMYREGVGTSANPSSAVEWYRKAAAANDTNGMVGLADCYLLGSGVAKNVQT 273
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEA--------VKLLYQASIAGHVRAQYQLALCL 207
+ YR AA G+ LG YL +A ++ +A+ G A + +
Sbjct: 274 CQTHYRTAADRGNALAMKRLGDLYLNNQALPRDLPKAIEWYEKAAKLGQPDALNTMGVLY 333
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAADC 266
G GV + ++A ++L++A G AM + + ++ G G + + + W++++AD
Sbjct: 334 VTGTGVTLDEKKALEYFLQSANAGNPLAMLHAAKFFAMGRGGVKQNFKTYAAWVRKSADL 393
Query: 267 GHGKAQLEHGLGLFTEGEMMK 287
G+ + E+GL F G+ +K
Sbjct: 394 GYPEGMYEYGL-CFAYGDGVK 413
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 85/210 (40%), Gaps = 18/210 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEMDKKEAAISLYR---QAAVL 166
+ G+GV KN K + + AA+ AMV A ++ KK A +R QAA L
Sbjct: 153 YLEGKGVTKNWAKGEELLREAAAKNHADAMVTLAAVLIDSRSKKVDAAESFRWMKQAAEL 212
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
DP LG Y + AV+ +A+ A LA C G GV N+Q
Sbjct: 213 QDPEAMTLLGHMYREGVGTSANPSSAVEWYRKAAAANDTNGMVGLADCYLLGSGVAKNVQ 272
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
Y AA+ G AM Y + LP +A +W ++AA G A G+
Sbjct: 273 TCQTHYRTAADRGNALAMKRLGDLYLNNQALPRDLPKAIEWYEKAAKLGQPDALNTMGV- 331
Query: 279 LFTEG-----EMMKAVVYLELATRAGETAA 303
L+ G + KA+ Y + AG A
Sbjct: 332 LYVTGTGVTLDEKKALEYFLQSANAGNPLA 361
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 23/145 (15%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM 150
W + L + L G + G GV + KAL+ FL+ A G+ LAM+ A +
Sbjct: 313 WYEKAAKLGQPDALNTMGVLYVTGTGVTLDEKKALEYFLQSANAGNPLAMLHAAKFF--- 369
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRG 210
A G F +++++ A G+ Y+ LC G
Sbjct: 370 ------------AMGRGGVKQNFKTYAAWVRKSA--------DLGYPEGMYEYGLCFAYG 409
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRA 235
GV N + AA W +AA+ GY +A
Sbjct: 410 DGVKRNDKTAALWIRKAADAGYAQA 434
>gi|397663782|ref|YP_006505320.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
gi|395127193|emb|CCD05383.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
Length = 376
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 20/221 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYM-MGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAGQFNLGISYLQEE---------AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA GD G+++LG+ Y +E A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
D + +AA WY AAE G A G G+ ++QA W ++A G+ Q
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQA 305
Query: 274 EHGL----GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 309
+ G GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+S EA K +A+ G+ AQ + L G GV +
Sbjct: 95 -------------DTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDD 141
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A W+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LG
Sbjct: 142 KAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLG 199
Query: 279 LFTEGE 284
L G+
Sbjct: 200 LLYTGQ 205
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q+ G++ EEA +A+ + AQ L G+GV + EA +WY++AAE G
Sbjct: 59 QYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQG 118
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMK 287
A N L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ K
Sbjct: 119 NPIAQRNIGLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Query: 288 AVVYLELATRAGETAADHVKNVIL--QQLSATSRDRA 322
A + + A G+ ++ ++ Q+ ++ D+A
Sbjct: 179 AFEWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKA 215
>gi|332527784|ref|ZP_08403823.1| Sel1 domain-containing protein [Rubrivivax benzoatilyticus JA2]
gi|332112180|gb|EGJ12156.1| Sel1 domain-containing protein [Rubrivivax benzoatilyticus JA2]
Length = 526
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 24/222 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---- 155
+A+ +G+ +G GV+K++ A F K A +G A + W ++ +
Sbjct: 161 DAIAQRNFGRLLFNGSGVKKDVAAAAGWFRKSADQGDADAQ---NWIGWMSERGQGLPQD 217
Query: 156 ---AISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLA 204
A+ YR AA G Q NLG+ + E+A +A+ G RAQY L
Sbjct: 218 YVQAVVWYRYAAEQGLAMAQANLGVLLASGLGVTKDPEQAAAWYRKAAEQGEPRAQYLLG 277
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ L G GV + EA WY +AAE G RA + + Y+ GEG+ S R+A W +AA
Sbjct: 278 VALAGGDGVAKDAHEAVVWYRKAAEQGRARAQFKLAYAYASGEGVEKSPREAAAWYLKAA 337
Query: 265 DCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGET 301
+ G AQ GL L+ G+ ++ A + EL+ R G
Sbjct: 338 EQGDSDAQNNLGL-LYELGDGVRQDASEAARWYELSARQGNA 378
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLG 167
+ G+G+ ++ +A+ + A +G +A + G++ E A + YR+AA G
Sbjct: 209 ERGQGLPQDYVQAVVWYRYAAEQGLAMAQANLGVLLASGLGVTKDPEQAAAWYRKAAEQG 268
Query: 168 DPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+P Q+ LG++ EAV +A+ G RAQ++LA G GV+ + +E
Sbjct: 269 EPRAQYLLGVALAGGDGVAKDAHEAVVWYRKAAEQGRARAQFKLAYAYASGEGVEKSPRE 328
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
AA WYL+AAE G A N L Y G+G+ +A +W + +A G+ Q L +
Sbjct: 329 AAAWYLKAAEQGDSDAQNNLGLLYELGDGVRQDASEAARWYELSARQGNAWGQRNIAL-M 387
Query: 280 FTEGEMM-----KAVVYLELATRAGETAADHV--KNVILQQLSATSRDRAMLVVDSWR 330
+GE + +A +L LA A D +N + +LS + +W+
Sbjct: 388 LRDGEGLPASPIQAYAWLNLAASADTPHPDAAEERNALAARLSKAQLQDGQRLARAWK 445
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 16/182 (8%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLA 204
+E A + YR+AA+ G A Q+ + Y++ E + Y +A+ GH+ A +
Sbjct: 74 REDAAAWYRKAALQGHGASQYGVAYLYVKGEGLPQDYAQAASWFRKAADQGHLAAGNWIG 133
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G GV ++ EA+RWY AAE G A N G G+ A W +++A
Sbjct: 134 WLHEQGLGVQKSVGEASRWYRWAAERGDAIAQRNFGRLLFNGSGVKKDVAAAAGWFRKSA 193
Query: 265 DCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATS 318
D G AQ E G GL + ++AVV+ A G A V+L +
Sbjct: 194 DQGDADAQNWIGWMSERGQGLPQ--DYVQAVVWYRYAAEQGLAMAQANLGVLLASGLGVT 251
Query: 319 RD 320
+D
Sbjct: 252 KD 253
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
YQ ++AG Y +C+ R R ++AA WY +AA G+ + Y + Y GEG
Sbjct: 56 YQNALAGA----YYDGVCVQRSR------EDAAAWYRKAALQGHGASQYGVAYLYVKGEG 105
Query: 249 LPLSHRQARKWMKRAADCGH 268
LP + QA W ++AAD GH
Sbjct: 106 LPQDYAQAASWFRKAADQGH 125
>gi|291522026|emb|CBK80319.1| Sel1 repeat [Coprococcus catus GD/7]
Length = 457
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 111/261 (42%), Gaps = 25/261 (9%)
Query: 29 RPELTASARKARIKRRSRFSCSRSIK-----STEGHDFASLPFDVLNKIAASFTLPQLRA 83
+PE+ + +K+ S + IK +TE P +++NK A Q +
Sbjct: 190 KPEVVEAKSVDELKKAMASSEPKVIKFNADSATESKAAEKQP-EIVNKKIAEEQSDQFQQ 248
Query: 84 ASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDA 143
+ A+ L L G R R++ DKA + A++G T A
Sbjct: 249 SEPA-----KAIEELTTRDDLFAEGMRILENGTTREDGDKAFKCLRQAASQGHTEAQYQL 303
Query: 144 GLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQ 190
+ Y + EAA + AA G Q +G Y +EAV
Sbjct: 304 SVCYDRGIGVRRNITEAA-KWCQMAAFGGHAKAQSEIGYCYEYGQGVVRNIKEAVSWYEM 362
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
AS G++ A+ LA C +GRGV +++EA R Y AA GG+ A YN CY +GEG+
Sbjct: 363 ASAQGNIEAKNNLAFCYQKGRGVHKDVKEAIRLYGEAAAGGHASAQYNLGYCYWYGEGVK 422
Query: 251 LSHRQARKWMKRAADCGHGKA 271
+A + K++AD G+ KA
Sbjct: 423 TDKSRAIELFKQSADNGNAKA 443
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
++A K L QA+ GH AQYQL++C RG GV N+ EAA+W AA GG+ +A
Sbjct: 282 DKAFKCLRQAASQGHTEAQYQLSVCYDRGIGVRRNITEAAKWCQMAAFGGHAKAQSEIGY 341
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
CY +G+G+ + ++A W + A+ G+ +A+
Sbjct: 342 CYEYGQGVVRNIKEAVSWYEMASAQGNIEAK 372
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A RQAA G Q+ L + Y + EA K A+ GH +AQ ++ C
Sbjct: 284 AFKCLRQAASQGHTEAQYQLSVCYDRGIGVRRNITEAAKWCQMAAFGGHAKAQSEIGYCY 343
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV N++EA WY A+ G + A N + CY G G+ ++A + AA G
Sbjct: 344 EYGQGVVRNIKEAVSWYEMASAQGNIEAKNNLAFCYQKGRGVHKDVKEAIRLYGEAAAGG 403
Query: 268 HGKAQLEHG 276
H AQ G
Sbjct: 404 HASAQYNLG 412
>gi|433210797|ref|ZP_20394429.1| hypothetical protein WI1_04569, partial [Escherichia coli KTE97]
gi|431725617|gb|ELJ89459.1| hypothetical protein WI1_04569, partial [Escherichia coli KTE97]
Length = 482
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 164 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 223
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P Q +L G+ E+A K +++ G+ AQY LA GRGVD
Sbjct: 224 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 283
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ Q+ W +AE +A Y Y G +P A +K AAD G A L
Sbjct: 284 DYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDMTMAINLLKAAADHGDIDAALVL 343
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
HG + ++ +A+ YL A GE + + ++I Q
Sbjct: 344 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILSMIYYQ 387
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQAAVLGDPAGQFNLGIS 178
K L S+ + A +G+++ D G MY+ E+ KK+ + Y ++A G+ NL +
Sbjct: 143 KKLTSYKRAAQQGNSVFQNDLGAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALM 202
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR-GRGVDFNLQEAARWYLRAAE 229
Y ++A+ L A+ H AQ+ LA C++R G GV+ + ++A +W ++AE
Sbjct: 203 YRDGKGVNKNPQKAISLYLNAANKNHPLAQHSLA-CMYRDGEGVEVDDEQAFKWCQKSAE 261
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GY A Y+ + Y G G+ + ++Q W+ +A+ + KA+ G + E+ + +
Sbjct: 262 QGYAEAQYHLATMYIDGRGVDVDYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDM 321
Query: 290 VYLELATRAGETAADH 305
+A + AADH
Sbjct: 322 T---MAINLLKAAADH 334
>gi|365920829|ref|ZP_09445138.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
gi|364577292|gb|EHM54573.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
Length = 364
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G+GV ++ +A + K AA+ A + G++Y E D +AA + Y +AAV
Sbjct: 144 YDKGKGVTQDYGQARAWYEKAAAQDDAQAQYNLGVLYDEGKGVTHDYTQAA-AWYEKAAV 202
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD A QFNLG+ Y + + V Y +A++ G V+AQY L + G+GV +
Sbjct: 203 QGDAAAQFNLGLLYDEGKGVTQDYTQAAAWYEKAAVQGLVQAQYNLGVLYRDGQGVAQDY 262
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+A RW+ +AA + A +N + Y G+G+ + QAR W ++AA
Sbjct: 263 GKARRWFEKAAAQNFAPAQFNLGVLYRDGQGVAQDYTQARAWFEKAA 309
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 19/189 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ +G GV ++ D+A + K AA+G + G++Y DK + Y QA + A
Sbjct: 108 YANGWGVAQDYDQARAWWGKAAAQGHVNGQYNLGVLY---DKGKGVTQDYGQARAWYEKA 164
Query: 171 GQ-------FNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
+NLG+ Y + + V Y +A++ G AQ+ L L G+GV
Sbjct: 165 AAQDDAQAQYNLGVLYDEGKGVTHDYTQAAAWYEKAAVQGDAAAQFNLGLLYDEGKGVTQ 224
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +AA WY +AA G V+A YN + Y G+G+ + +AR+W ++AA AQ
Sbjct: 225 DYTQAAAWYEKAAVQGLVQAQYNLGVLYRDGQGVAQDYGKARRWFEKAAAQNFAPAQFNL 284
Query: 276 GLGLFTEGE 284
G+ L+ +G+
Sbjct: 285 GV-LYRDGQ 292
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 50/206 (24%)
Query: 164 AVLGDPAGQFNLGISYLQEEAVK--------------------------LLY-------- 189
AV GD A QF LG Y Q + V +LY
Sbjct: 57 AVAGDAAAQFELGALYYQGQDVAQDYAQAAAWWVKAAAQDDANAQYNLGILYANGWGVAQ 116
Query: 190 ----------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+A+ GHV QY L + +G+GV + +A WY +AA +A YN
Sbjct: 117 DYDQARAWWGKAAAQGHVNGQYNLGVLYDKGKGVTQDYGQARAWYEKAAAQDDAQAQYNL 176
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLEL 294
+ Y G+G+ + QA W ++AA G AQ GL L+ EG + +A + E
Sbjct: 177 GVLYDEGKGVTHDYTQAAAWYEKAAVQGDAAAQFNLGL-LYDEGKGVTQDYTQAAAWYEK 235
Query: 295 ATRAGETAADHVKNVILQQLSATSRD 320
A G A + V+ + ++D
Sbjct: 236 AAVQGLVQAQYNLGVLYRDGQGVAQD 261
>gi|323455583|gb|EGB11451.1| hypothetical protein AURANDRAFT_21269, partial [Aureococcus
anophagefferens]
Length = 220
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 135 GSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-----EEA 184
G AM G MY ++DKK+ LYR AA G Q+NLG ++L EEA
Sbjct: 1 GDVDAMPFLGEMYGNGLGVKLDKKKKE-RLYRMAADRGSAFAQYNLG-TFLHFEEKFEEA 58
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+ A+ GH ++ L C GRG ++AA+ Y RA E G V AM N Y
Sbjct: 59 FRYYVLAANQGHTEGEHGLGYCYRLGRGT----EKAAKIYRRAVELGDVEAMRNLGFMYE 114
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 304
G G+ L ++A + + AAD G AQ G L E + +A+ Y LA G A +
Sbjct: 115 TGSGVKLDKKKAERLYRMAADRGDATAQFNLGAFLHAEAKFEEAIRYFVLAADQGLAAGE 174
Query: 305 H 305
H
Sbjct: 175 H 175
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 16/140 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
++ GRG +KA + + G AM + G MY ++DKK+A LYR AA
Sbjct: 81 YRLGRGT----EKAAKIYRRAVELGDVEAMRNLGFMYETGSGVKLDKKKAE-RLYRMAAD 135
Query: 166 LGDPAGQFNLGISYLQ-----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
GD QFNLG ++L EEA++ A+ G ++ L C GRG + +L +A
Sbjct: 136 RGDATAQFNLG-AFLHAEAKFEEAIRYFVLAADQGLAAGEHGLGYCYRLGRGTEVDLGKA 194
Query: 221 ARWYLRAAEGGYVRAMYNTS 240
WY RAA GY +A N +
Sbjct: 195 RYWYARAAAKGYEKATRNLA 214
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 12/142 (8%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGIS 178
+ ++A ++ A +G T G Y E A +YR+A LGD NLG
Sbjct: 53 EKFEEAFRYYVLAANQGHTEGEHGLGYCYRLGRGTEKAAKIYRRAVELGDVEAMRNLGFM 112
Query: 179 YLQEEAVKL-------LYQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y VKL LY+ A+ G AQ+ L LH + +EA R+++ AA+
Sbjct: 113 YETGSGVKLDKKKAERLYRMAADRGDATAQFNLGAFLH----AEAKFEEAIRYFVLAADQ 168
Query: 231 GYVRAMYNTSLCYSFGEGLPLS 252
G + CY G G +
Sbjct: 169 GLAAGEHGLGYCYRLGRGTEVD 190
>gi|54297265|ref|YP_123634.1| hypothetical protein lpp1310 [Legionella pneumophila str. Paris]
gi|397666972|ref|YP_006508509.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
gi|53751050|emb|CAH12461.1| hypothetical protein lpp1310 [Legionella pneumophila str. Paris]
gi|395130383|emb|CCD08623.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
Length = 376
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 20/221 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYM-MGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAGQFNLGISYLQEE---------AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA GD G+++LG+ Y +E A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
D + +AA WY AAE G A G G+ ++QA W ++A G+ Q
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQA 305
Query: 274 EHGL----GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 309
+ G GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+S EA K +A+ G+ AQ + L G GV +
Sbjct: 95 -------------DTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDD 141
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A W+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LG
Sbjct: 142 KAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLG 199
Query: 279 LFTEGE 284
L G+
Sbjct: 200 LLYTGQ 205
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q+ G++ EEA +A+ + AQ L G+GV + EA +WY++AAE G
Sbjct: 59 QYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQG 118
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMK 287
A N L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ K
Sbjct: 119 NPIAQRNIGLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Query: 288 AVVYLELATRAGETAADHVKNVIL--QQLSATSRDRAML 324
A + + A G+ ++ ++ Q+ ++ D+A
Sbjct: 179 AFEWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKAAF 217
>gi|323453624|gb|EGB09495.1| hypothetical protein AURANDRAFT_23917 [Aureococcus anophagefferens]
Length = 280
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 20/238 (8%)
Query: 100 EAMVLLRWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKK 153
EA+ L G ++ GR G+ K+ KA + + G AMV G M+ E +DKK
Sbjct: 15 EAISFL--GGAYREGRLGLVKSEKKAAKIWKRAVELGDVDAMVFIGEMHEEGSGVKLDKK 72
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHR 209
+A + LYR AA G Q NL I E EA + A+ G+ + L +C
Sbjct: 73 KA-MKLYRAAADRGSAVAQTNLAILLCHEKKFEEAFRYFALAADRGYTPGEINLGICYRN 131
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAM-------YNTSLCYSFGEGLPLSHRQARKWMKR 262
G+G + +L +A W+ R A G+ +A+ + Y G G+ L ++A + +
Sbjct: 132 GQGTEVDLGKARYWFERGAAKGHEKAIEILARPDWTIPRLYVTGSGVKLDKKKAMQLFRT 191
Query: 263 AADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
AAD G AQ G+ L++E +A Y LA G T +++ + + T D
Sbjct: 192 AADLGSAVAQTNLGVLLYSEKRFEEAFRYYALAANQGFTPSENNLGICYMDGAGTEVD 249
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFN 174
R V + +A+ SFL GA R L +V + +KK A I +++A LGD
Sbjct: 7 RHVENEVPEAI-SFLGGAYREGRLGLVKS-------EKKAAKI--WKRAVELGDVDAMVF 56
Query: 175 LGISYLQEEAVKL-------LYQASIA-GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
+G + + VKL LY+A+ G AQ LA+ L + +EA R++
Sbjct: 57 IGEMHEEGSGVKLDKKKAMKLYRAAADRGSAVAQTNLAILLCHEK----KFEEAFRYFAL 112
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
AA+ GY N +CY G+G + +AR W +R A GH KA
Sbjct: 113 AADRGYTPGEINLGICYRNGQGTEVDLGKARYWFERGAAKGHEKA 157
>gi|187935086|ref|YP_001886041.1| Sel1 repeat family [Clostridium botulinum B str. Eklund 17B]
gi|187723239|gb|ACD24460.1| Sel1 repeat family [Clostridium botulinum B str. Eklund 17B]
Length = 269
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + G GV ++ +KA + F A++G+ A + MY E E AI Y +A
Sbjct: 81 GDMYYCGNGVEQDYEKAKEYFEYSASQGNPDAQCNLACMYEEGLGTGVNYEKAIKWYEKA 140
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A+ D Q+NLG Y+ + V + Y+ ASI G+ ++Q L +G G++
Sbjct: 141 ALQEDFYAQYNLGNLYMYGKGVDIDYKRAFKWHMKASILGYEKSQNTLGYMYEQGLGMEK 200
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
N +EA ++Y +AA Y A YN + Y G G+ + A W ++AA+ G KA
Sbjct: 201 NYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDRKAAYIWYQKAANQGLRKA 256
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLAL 205
E A+ Y ++A G Q+NLG Y E+A + ++ G+ AQ LA
Sbjct: 59 EEAVKWYIKSAEQGYDVAQYNLGDMYYCGNGVEQDYEKAKEYFEYSASQGNPDAQCNLAC 118
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G G N ++A +WY +AA A YN Y +G+G+ + +++A KW +A+
Sbjct: 119 MYEEGLGTGVNYEKAIKWYEKAALQEDFYAQYNLGNLYMYGKGVDIDYKRAFKWHMKASI 178
Query: 266 CGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 319
G+ K+Q E GLG+ E +AV Y + A + A++ + + ++
Sbjct: 179 LGYEKSQNTLGYMYEQGLGM--EKNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQ 236
Query: 320 DR 321
DR
Sbjct: 237 DR 238
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
+AQ L + G + + +EA +WY+++AE GY A YN Y G G+ + +A+
Sbjct: 39 KAQNALGDKYYIGDDIAQDYEEAVKWYIKSAEQGYDVAQYNLGDMYYCGNGVEQDYEKAK 98
Query: 258 KWMKRAADCGHGKAQ------LEHGLG 278
++ + +A G+ AQ E GLG
Sbjct: 99 EYFEYSASQGNPDAQCNLACMYEEGLG 125
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G N +KA+ + K A + A + G +Y ++D K A + +A++
Sbjct: 120 YEEGLGTGVNYEKAIKWYEKAALQEDFYAQYNLGNLYMYGKGVDIDYKRA-FKWHMKASI 178
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG Q LG Y Q EEAVK +A+ + A+Y LA + G G+ +
Sbjct: 179 LGYEKSQNTLGYMYEQGLGMEKNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDR 238
Query: 218 QEAARWYLRAAEGGYVRAM 236
+ A WY +AA G +A+
Sbjct: 239 KAAYIWYQKAANQGLRKAV 257
>gi|338812695|ref|ZP_08624862.1| Sel1 domain-containing protein [Acetonema longum DSM 6540]
gi|337275319|gb|EGO63789.1| Sel1 domain-containing protein [Acetonema longum DSM 6540]
Length = 567
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 16/234 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV K+ A K A G A G+ Y+ AA+ ++QA
Sbjct: 168 GMAYYSGTGVTKDQTLAFTWIRKAADNGYAPAQHRVGIHYYNGIGVAKDPAAAVKWWKQA 227
Query: 164 AVLGDPAG--------QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ A F G++ Q EA+K +A+ G AQ L + + G+G+
Sbjct: 228 AGQGNVASLAMVGFAYHFGHGVNQDQAEALKWWRKAADKGDSDAQTMLGVAYYEGQGIAK 287
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A +W+L+AA G + A ++ + Y GEG+P +H +A W ++AA+ G ++Q
Sbjct: 288 DQAQAIQWWLKAANQGQMLAQHHLAFAYYRGEGVPQNHAEAVIWWQKAAEKGEPESQTML 347
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
G LG T + KAV++ G A + V L +D A V
Sbjct: 348 GTAYFLGQGTTKDSKKAVMWWTKGAAQGNKVAQYYLGVALSTGDGIVKDEAAAV 401
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 18/215 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQA 163
G + G GV +N +A+ + K A +GS A G+ Y + ++K A A++ ++++
Sbjct: 96 GFAYMSGNGVEQNPKQAVYWWRKSADQGSMQAQHMLGVSYSSGYVVNKDAAEAVAWWQKS 155
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G PA Q+ LG++Y Q A + +A+ G+ AQ+++ + + G GV
Sbjct: 156 ADQGFPAAQYFLGMAYYSGTGVTKDQTLAFTWIRKAADNGYAPAQHRVGIHYYNGIGVAK 215
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ A +W+ +AA G V ++ Y FG G+ +A KW ++AAD G AQ
Sbjct: 216 DPAAAVKWWKQAAGQGNVASLAMVGFAYHFGHGVNQDQAEALKWWRKAADKGDSDAQTML 275
Query: 276 GLGLFTEGEMM-----KAVVYLELATRAGETAADH 305
G+ + EG+ + +A+ + A G+ A H
Sbjct: 276 GVAYY-EGQGIAKDQAQAIQWWLKAANQGQMLAQH 309
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+LG+P GQ Q + L Q++ G +AQYQL L+ G+GV + +EAA+W+
Sbjct: 28 ILGNPTGQ-------AQAATIAELRQSAAKGDPQAQYQLGHILYLGQGVPRDYKEAAKWF 80
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLF 280
++A+ G A Y G G+ + +QA W +++AD G +AQ + + G
Sbjct: 81 KQSADQGNSAAQTALGFAYMSGNGVEQNPKQAVYWWRKSADQGSMQAQHMLGVSYSSGYV 140
Query: 281 TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
+ +AV + + + G AA + + + ++D+ +
Sbjct: 141 VNKDAAEAVAWWQKSADQGFPAAQYFLGMAYYSGTGVTKDQTL 183
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 155 AAISLYRQAAVLGDPAGQFNLG-ISYLQE-------EAVKLLYQASIAGHVRAQYQLALC 206
A I+ RQ+A GDP Q+ LG I YL + EA K Q++ G+ AQ L
Sbjct: 39 ATIAELRQSAAKGDPQAQYQLGHILYLGQGVPRDYKEAAKWFKQSADQGNSAAQTALGFA 98
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G GV+ N ++A W+ ++A+ G ++A + + YS G + +A W +++AD
Sbjct: 99 YMSGNGVEQNPKQAVYWWRKSADQGSMQAQHMLGVSYSSGYVVNKDAAEAVAWWQKSADQ 158
Query: 267 GHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
G AQ G+ ++ + K A ++ A G A H + ++D A
Sbjct: 159 GFPAAQYFLGMAYYSGTGVTKDQTLAFTWIRKAADNGYAPAQHRVGIHYYNGIGVAKDPA 218
Query: 323 MLV 325
V
Sbjct: 219 AAV 221
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQ 202
D KEAA ++Q+A G+ A Q LG +Y+ ++AV +++ G ++AQ+
Sbjct: 72 DYKEAA-KWFKQSADQGNSAAQTALGFAYMSGNGVEQNPKQAVYWWRKSADQGSMQAQHM 130
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L + G V+ + EA W+ ++A+ G+ A Y + Y G G+ A W+++
Sbjct: 131 LGVSYSSGYVVNKDAAEAVAWWQKSADQGFPAAQYFLGMAYYSGTGVTKDQTLAFTWIRK 190
Query: 263 AADCGHGKAQLEHGLGLFT 281
AAD G+ AQ G+ +
Sbjct: 191 AADNGYAPAQHRVGIHYYN 209
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 102/246 (41%), Gaps = 57/246 (23%)
Query: 78 LPQLRAASLVCKSWNDALR---PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR 134
+PQ A +++ W A P + M+ G + G+G K+ KA+ + KGAA+
Sbjct: 321 VPQNHAEAVIW--WQKAAEKGEPESQTML----GTAYFLGQGTTKDSKKAVMWWTKGAAQ 374
Query: 135 GSTLAMVDAGLM----------------YWEMDKKEA----------------------- 155
G+ +A G+ YW+ ++A
Sbjct: 375 GNKVAQYYLGVALSTGDGIVKDEAAAVSYWKKSAEQAYIPAYVGLGQAYYKGQGVAKDYA 434
Query: 156 -AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALC 206
AI Y++A G+ A Q++LG++Y + ++AVKL + G+ AQ+ L
Sbjct: 435 TAIKFYQKAMEKGNAAAQYHLGVAYYEGKGVDKSPKQAVKLWEPIANKGYALAQFALVEI 494
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
+ V N A W AAE G +A Y L Y+ G + +A KW+K++A
Sbjct: 495 VQDNLSVIDNYALAVVWRQDAAEKGNAQAQYYLGLAYANGWDVRQDRTEAVKWLKKSAQQ 554
Query: 267 GHGKAQ 272
G+ A+
Sbjct: 555 GNDAAK 560
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 109/282 (38%), Gaps = 59/282 (20%)
Query: 77 TLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGS 136
T Q A + + K+ ++ P + R G + +G GV K+ A+ + + A +G+
Sbjct: 178 TKDQTLAFTWIRKAADNGYAPAQH-----RVGIHYYNGIGVAKDPAAAVKWWKQAAGQGN 232
Query: 137 TLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEE 183
++ G Y D+ EA + +R+AA GD Q LG++Y Q +
Sbjct: 233 VASLAMVGFAYHFGHGVNQDQAEA-LKWWRKAADKGDSDAQTMLGVAYYEGQGIAKDQAQ 291
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA---------------------- 221
A++ +A+ G + AQ+ LA +RG GV N EA
Sbjct: 292 AIQWWLKAANQGQMLAQHHLAFAYYRGEGVPQNHAEAVIWWQKAAEKGEPESQTMLGTAY 351
Query: 222 --------------RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
W+ + A G A Y + S G+G+ A + K++A+
Sbjct: 352 FLGQGTTKDSKKAVMWWTKGAAQGNKVAQYYLGVALSTGDGIVKDEAAAVSYWKKSAEQA 411
Query: 268 HGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADH 305
+ A + G + + K A+ + + A G AA +
Sbjct: 412 YIPAYVGLGQAYYKGQGVAKDYATAIKFYQKAMEKGNAAAQY 453
>gi|425701990|gb|AFX93152.1| putative Sel1-like repeat-containing protein [Megavirus courdo11]
Length = 570
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+ KA + A +G + A + G Y++ DK E AI ++++ G
Sbjct: 112 GFMYEENIGITGKTKKAKKWYALSANQGLSFAQYNLGYYYFKKDKYEKAIDCFQKSMQSG 171
Query: 168 DPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
+ L +YL+ +EA+KL ++ G++ +QY+L + + G + N+ EA
Sbjct: 172 CYVSNYMLAETYLKLSVPNHDEAIKLFTISANKGYIYSQYRLGILYYDGIHIPININEAI 231
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG--- 278
+W+L AA G + + Y G+ + + QA KW K +A G+ A E+GLG
Sbjct: 232 KWFLMAANQGCDMSQNKLGVIYFEGKYINVDMNQAYKWFKLSAKQGNYFA--EYGLGRVY 289
Query: 279 ---LFTEGEMMKAV 289
FT+ KA+
Sbjct: 290 DSKYFTKYNCQKAI 303
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFN 174
N D+A+ F A +G + G++Y++ ++ EA I + AA G Q
Sbjct: 190 NHDEAIKLFTISANKGYIYSQYRLGILYYDGIHIPININEA-IKWFLMAANQGCDMSQNK 248
Query: 175 LGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
LG+ Y + +A K ++ G+ A+Y L +N Q+A Y++
Sbjct: 249 LGVIYFEGKYINVDMNQAYKWFKLSAKQGNYFAEYGLGRVYDSKYFTKYNCQKAINCYIK 308
Query: 227 AAEGGYV 233
AA GY+
Sbjct: 309 AANNGYI 315
>gi|424741229|ref|ZP_18169590.1| Sel1 repeat protein [Acinetobacter baumannii WC-141]
gi|422945162|gb|EKU40133.1| Sel1 repeat protein [Acinetobacter baumannii WC-141]
Length = 230
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDP 169
+GV KN ++A GS A G+MY+ E D K A + +AA
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSMGAKYSLGMMYYTGTGVEKDAKRA-FDYFTKAAAKDHV 112
Query: 170 AGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NLG+ Y + E A + +A+ G+ A+Y LA +G GV + ++A
Sbjct: 113 KAQYNLGVLYDRGEGTAQDYGKAFEWFSRAAKQGYPPAEYNLAHLYKKGHGVSQSNEQAL 172
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+WY +AAE A YN + Y GEG P + + A+KW ++AAD G
Sbjct: 173 KWYTKAAEHNESDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAG 218
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + G GV K+ +A D F K AA+ A + G++Y D+ E A +
Sbjct: 83 GMMYYTGTGVEKDAKRAFDYFTKAAAKDHVKAQYNLGVLY---DRGEGTAQDYGKAFEWF 139
Query: 161 RQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+AA G P ++NL G+S E+A+K +A+ AQY LA G G
Sbjct: 140 SRAAKQGYPPAEYNLAHLYKKGHGVSQSNEQALKWYTKAAEHNESDAQYNLAQMYLNGEG 199
Query: 213 VDFNLQEAARWYLRAAEGGYVRA 235
NLQ A +W+ +AA+ G + A
Sbjct: 200 TPKNLQLAKKWFQQAADAGDIDA 222
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGG 231
F+L S E +V + + G AQY L + L G +GV N ++A +W A + G
Sbjct: 15 FSLHSSAFAEPSVADIQYRAEHGQSVAQYHLGMMLLSGEQGVVKNYEQAFKWLTAADQNG 74
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+ A Y+ + Y G G+ ++A + +AA H KAQ G+ L+ GE
Sbjct: 75 SMGAKYSLGMMYYTGTGVEKDAKRAFDYFTKAAAKDHVKAQYNLGV-LYDRGE 126
>gi|403054362|ref|ZP_10908846.1| hypothetical protein AberL1_23156 [Acinetobacter bereziniae LMG
1003]
Length = 303
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 20/215 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLY 160
G + G GV N KA + F + A G+ AM GL+Y E+D K+A + Y
Sbjct: 61 GSMYATGEGVDLNPKKAFELFEQAANLGNDEAMFQLGLIYNDGSNYLKEIDNKKA-LYWY 119
Query: 161 RQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA + A N+G++Y + +A + ++A+ G +++Q +A L+ G G
Sbjct: 120 KKAAEKNNAAALHNMGVAYYDGVGVAQNKSQAYEYFHKAAELGFLQSQIIVAYQLYTGTG 179
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ +L ++ W ++AAE G +++ N +L Y GEG+ ++ W ++A+ G+ +AQ
Sbjct: 180 ITKDLSQSFYWSMKAAEQGDIKSQNNVALNYEKGEGVERDPIKSLNWFIKSANNGNVEAQ 239
Query: 273 LEHGLGLF----TEGEMMKAVVYLELATRAGETAA 303
L F T + KA+ Y E A + AA
Sbjct: 240 YNTALKYFSGNGTNQDFSKAIEYAEKAATSNNKAA 274
>gi|432471064|ref|ZP_19713111.1| hypothetical protein A15M_01945 [Escherichia coli KTE206]
gi|430998282|gb|ELD14523.1| hypothetical protein A15M_01945 [Escherichia coli KTE206]
Length = 702
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 384 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 443
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P Q +L G+ E+A K +++ G+ AQY LA GRGVD
Sbjct: 444 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 503
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 504 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 563
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 564 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 607
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQAAVLGDPAGQFNLGIS 178
K L S+ + A +G+++ D G MY+ E+ KK+ + Y ++A G+ NL +
Sbjct: 363 KKLTSYKRAAQQGNSVFQNDLGAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALM 422
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR-GRGVDFNLQEAARWYLRAAE 229
Y ++A+ L A+ H AQ+ LA C++R G GV+ + ++A +W ++AE
Sbjct: 423 YRDGKGVNKNPQKAISLYLNAANKNHPLAQHSLA-CMYRDGEGVEVDDEQAFKWCQKSAE 481
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GY A Y+ + Y G G+ + ++Q W+ +AD + KA+ G + E+ + +
Sbjct: 482 QGYAEAQYHLATMYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDM 541
Query: 290 VYLELATRAGETAADH 305
+A ++AADH
Sbjct: 542 T---MAINLLKSAADH 554
>gi|281422834|ref|ZP_06253833.1| Sel1 repeat family protein [Prevotella copri DSM 18205]
gi|281403100|gb|EFB33780.1| Sel1 repeat family protein [Prevotella copri DSM 18205]
Length = 424
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + G+GV +NL +A+ F K A + + A + G Y+
Sbjct: 55 GEAYYDGKGVTENLTEAVKWFTKAAEQENAKAEYNLGNCYY------------------- 95
Query: 168 DPAGQFNLGISYLQE-EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
+ G+ Y EAVK +A+ + AQ L C G GVD NL+EA +WY +
Sbjct: 96 -----YGYGVQYKDYGEAVKWYTKAAEQEYAEAQNSLGYCYEFGEGVDKNLKEAVKWYTK 150
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
AAE G A N CY G+ + + +A KW +AA+ G+ KAQ G
Sbjct: 151 AAEQGLPLAQCNLGACYENGDWVEKNLEEAVKWYTKAANQGYAKAQYYLG 200
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL-S 252
+G AQ L + G+GV NL EA +W+ +AAE +A YN CY +G G+
Sbjct: 45 SGEAEAQNALGEAYYDGKGVTENLTEAVKWFTKAAEQENAKAEYNLGNCYYYGYGVQYKD 104
Query: 253 HRQARKWMKRAADCGHGKAQ 272
+ +A KW +AA+ + +AQ
Sbjct: 105 YGEAVKWYTKAAEQEYAEAQ 124
>gi|156975097|ref|YP_001446004.1| hypothetical protein VIBHAR_02823 [Vibrio harveyi ATCC BAA-1116]
gi|156526691|gb|ABU71777.1| hypothetical protein VIBHAR_02823 [Vibrio harveyi ATCC BAA-1116]
Length = 256
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 28/225 (12%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + L +A +L G + +G+GV ++ ++A+ F K A +G ++ G +Y+
Sbjct: 2 AEQGLPKAQYIL--GLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGV 59
Query: 150 -MDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQ 200
D K+A + YR+AA G Q NLG+ Y +++AV L++A+ G AQ
Sbjct: 60 TQDDKQA-VYWYRKAAEQGLARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQ 118
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ L G+ + ++A WY +AAE G RA N L Y G+GL +QA W
Sbjct: 119 HNLGFMNQNGQ----DYKQAVYWYRKAAEQGLARAQSNLGLMYLHGQGLIQDDKQAVYWF 174
Query: 261 KRAADCGHGKAQLEHGLGL-FTEGEMM-----KAVVYLELATRAG 299
++AA G AQ H LGL + G+ + +A ++L LA G
Sbjct: 175 RKAAKQGFAIAQ--HNLGLVYLNGKGVTQDNAQAYMWLSLARHNG 217
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + HGRGV ++ +A+ K A +G +A + G M + A+ YR+AA G
Sbjct: 86 GVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQHNLGFMNQNGQDYKQAVYWYRKAAEQG 145
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
Q NLG+ YL ++AV +A+ G AQ+ L L G+GV + +
Sbjct: 146 LARAQSNLGLMYLHGQGLIQDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVTQDNAQ 205
Query: 220 AARWYLRAAEGGY--VRAMYNT 239
A W A G+ + +NT
Sbjct: 206 AYMWLSLARHNGFKNTKENFNT 227
>gi|373471191|ref|ZP_09562259.1| Sel1 repeat protein, partial [Lachnospiraceae bacterium oral taxon
082 str. F0431]
gi|371760930|gb|EHO49589.1| Sel1 repeat protein, partial [Lachnospiraceae bacterium oral taxon
082 str. F0431]
Length = 345
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+R+ +G GV ++ ++A+ F K A ++ A G Y+ + D EA + Y +
Sbjct: 16 GERYYNGDGVEQDYNEAIKWFKKSAENNNSWAQNALGNAYYNGLGIKQDYYEA-VKWYHK 74
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G GQ+NLG Y +A+K +++ + AQ L + G GV+
Sbjct: 75 SAEQGYHWGQYNLGERYYDGVGVEQDYIKAMKWFKKSAENNNSWAQNALGNGYYNGLGVN 134
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ A WY ++AE GY YN + Y +GEGL + +A KW K++A+ + AQ
Sbjct: 135 KDYYAAVEWYRKSAEQGYHWGQYNLGIRYYYGEGLQQDYNEAIKWFKKSAENNNSWAQTA 194
Query: 275 HGL----GLFTEGEMMKAV 289
G GL T + +AV
Sbjct: 195 LGTCYYNGLGTNQDYYEAV 213
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 48/208 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQA 163
G+R+ G GV ++ KA+ F K A ++ A G Y+ ++K AA+ YR++
Sbjct: 88 GERYYDGVGVEQDYIKAMKWFKKSAENNNSWAQNALGNGYYNGLGVNKDYYAAVEWYRKS 147
Query: 164 AVLGDPAGQFNLGISY-----LQE---EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G GQ+NLGI Y LQ+ EA+K +++ + AQ L C + G G +
Sbjct: 148 AEQGYHWGQYNLGIRYYYGEGLQQDYNEAIKWFKKSAENNNSWAQTALGTCYYNGLGTNQ 207
Query: 216 NLQEAARWYLRAAEGGYVRAMYNT------------------------------------ 239
+ EA WY ++A+ Y YN
Sbjct: 208 DYYEAVEWYNKSAQQNYGLGQYNLANMYYNGFGVDRDYNMALTLYTYAANNNVGDAAYML 267
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCG 267
S Y G G+ ++ + +W K+AA G
Sbjct: 268 SCMYYHGYGVQVNPKMEYEWAKKAAQLG 295
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R+ +G G++++ ++A+ F K A ++ A G Y+ D EA + Y +
Sbjct: 160 GIRYYYGEGLQQDYNEAIKWFKKSAENNNSWAQTALGTCYYNGLGTNQDYYEA-VEWYNK 218
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK-------LLYQASIAGHV-RAQYQLALCLHRGRGVD 214
+A GQ+NL Y V LY + +V A Y L+ + G GV
Sbjct: 219 SAQQNYGLGQYNLANMYYNGFGVDRDYNMALTLYTYAANNNVGDAAYMLSCMYYHGYGVQ 278
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N + W +AA+ G M N CY +G G+ + A++W K+A+ G
Sbjct: 279 VNPKMEYEWAKKAAQLGSAEGMTNLGNCYYYGRGITENKSLAKEWYKKASKAG 331
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++A G GQ+NLG Y EA+K +++ + AQ L + G G
Sbjct: 1 HKSAEQGYHWGQYNLGERYYNGDGVEQDYNEAIKWFKKSAENNNSWAQNALGNAYYNGLG 60
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ + EA +WY ++AE GY YN Y G G+ + +A KW K++A+ + AQ
Sbjct: 61 IKQDYYEAVKWYHKSAEQGYHWGQYNLGERYYDGVGVEQDYIKAMKWFKKSAENNNSWAQ 120
Query: 273 LEHGLGLFT 281
G G +
Sbjct: 121 NALGNGYYN 129
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ QY L + G GV+ + EA +W+ ++AE A Y G G+ +
Sbjct: 7 GYHWGQYNLGERYYNGDGVEQDYNEAIKWFKKSAENNNSWAQNALGNAYYNGLGIKQDYY 66
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHV 306
+A KW ++A+ G+ Q G G+ E + +KA+ + + + + A +
Sbjct: 67 EAVKWYHKSAEQGYHWGQYNLGERYYDGVGVEQDYIKAMKWFKKSAENNNSWAQNA 122
>gi|83954939|ref|ZP_00963617.1| Sel1-like repeat protein [Sulfitobacter sp. NAS-14.1]
gi|83840665|gb|EAP79837.1| Sel1-like repeat protein [Sulfitobacter sp. NAS-14.1]
Length = 402
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G ++ G+GV + A D F + AA+G A G M+ E+ + A A + YR+
Sbjct: 80 GVSYRFGQGVDPDAKTAFDYFTRAAAQGFDKAQFSLGNMH-ELGEGTAQSDAEARAWYRK 138
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ GQ+ LGI L+ EEA +LL ++ G AQY L + G GV
Sbjct: 139 AAEQGNAMGQYRLGILLLEGRGGEAAPEEAQQLLRASAEQGLADAQYSLGWMANHGVGVK 198
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY AAE GY A N Y+ G G +A W AA G AQ+
Sbjct: 199 QDHGQALEWYRLAAEQGYAPAQINLGNLYAEGLGTSQDDEKAVGWYYEAARHGVPAAQVN 258
Query: 275 HG----LGLFTEGEMMKAVVYLELATRAGETAA 303
G LG + + +A+V+ + A GE A
Sbjct: 259 MGKHYALGRGVQQDFDEAMVWYQQAAEYGEPVA 291
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 85/196 (43%), Gaps = 39/196 (19%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + L +A L W HG GV+++ +AL+ + A +G A ++ G +Y E
Sbjct: 176 AEQGLADAQYSLGW--MANHGVGVKQDHGQALEWYRLAAEQGYAPAQINLGNLYAEGLGT 233
Query: 150 MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHR 209
E A+ Y +AA G PA Q N+G Y AL
Sbjct: 234 SQDDEKAVGWYYEAARHGVPAAQVNMGKHY------------------------AL---- 265
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
GRGV + EA WY +AAE G A N L Y G+G P +A +W + AA+ G
Sbjct: 266 GRGVQQDFDEAMVWYQQAAEYGEPVAYLNVGLLYENGQGRPADPAEAARWYRAAAERGEP 325
Query: 270 K--AQLEHGLGLFTEG 283
+ A+L H + EG
Sbjct: 326 RSLAKLAH---FYAEG 338
>gi|386389391|ref|ZP_10074207.1| Sel1 repeat protein [Haemophilus paraphrohaemolyticus HK411]
gi|385695770|gb|EIG26321.1| Sel1 repeat protein [Haemophilus paraphrohaemolyticus HK411]
Length = 219
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAG 195
GL ++ + A L+ A G+ QFNLG+ Y EAVK +A+ G
Sbjct: 36 GLSAYQQSDYQTAFKLWLPLAEQGEANVQFNLGVMYANGQGVKQDYFEAVKWYRKAAEQG 95
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
AQ L + GRGV + EA +WY +AAE GY +A +N Y+ G+G+ +
Sbjct: 96 EANAQLNLGVMYDNGRGVKQDDVEAVKWYRKAAEQGYAKAQFNLGNMYANGQGVKQDDVE 155
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLF 280
A KW ++AA+ G+ AQ+ G F
Sbjct: 156 AVKWYRKAAEQGNANAQMILGTVYF 180
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 109 KRFKHGRGVRKNLD--KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYR 161
++F+ G + D A +L A +G + G+MY + D EA + YR
Sbjct: 31 QQFQQGLSAYQQSDYQTAFKLWLPLAEQGEANVQFNLGVMYANGQGVKQDYFEA-VKWYR 89
Query: 162 QAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA G+ Q NLG+ Y EAVK +A+ G+ +AQ+ L G+GV
Sbjct: 90 KAAEQGEANAQLNLGVMYDNGRGVKQDDVEAVKWYRKAAEQGYAKAQFNLGNMYANGQGV 149
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ EA +WY +AAE G A Y G+G+ + A++W +A D G+
Sbjct: 150 KQDDVEAVKWYRKAAEQGNANAQMILGTVYFLGKGVQFNKALAKEWFGKACDNGY 204
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
EA V G + +G+GV+++ +A+ + K A +G A ++ G+MY + D E
Sbjct: 60 EANVQFNLGVMYANGQGVKQDYFEAVKWYRKAAEQGEANAQLNLGVMYDNGRGVKQDDVE 119
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALC 206
A+ YR+AA G QFNLG Y EAVK +A+ G+ AQ L
Sbjct: 120 -AVKWYRKAAEQGYAKAQFNLGNMYANGQGVKQDDVEAVKWYRKAAEQGNANAQMILGTV 178
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGY 232
G+GV FN A W+ +A + GY
Sbjct: 179 YFLGKGVQFNKALAKEWFGKACDNGY 204
>gi|323455770|gb|EGB11638.1| hypothetical protein AURANDRAFT_36347 [Aureococcus anophagefferens]
Length = 558
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G ++ G G ++ KA F + RG+ AM L+Y + + A LYR A
Sbjct: 307 GCCYRDGDGTEQSAKKAAKLFRRAVERGNLRAMCALALLYVHGEGVKQSNQKANQLYRIA 366
Query: 164 AVLGDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
A G GQ NLG Y E +A + ++ G+ +A++ LA C H G GV+ +L+
Sbjct: 367 ADRGSALGQCNLGSRYALEGKFVDAARYYKLSAEQGYSKAEFNLAQCYHHGDGVERDLEI 426
Query: 220 AARWYLRAAEGGYVRAMYNTSLCY-----SFGEGLPLSHRQARKWMKRAADCGHGKA 271
A RW+ RA+ G AMY+ LC + R+A +W++ A GH A
Sbjct: 427 AKRWFARASAKGDSDAMYSLGLCCVDLSGEVTQNTAEHMREAIRWLESAVAAGHETA 483
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQF 173
K+ KA + + G A+V+ G +Y ++DKK+A L+R AA GD Q
Sbjct: 214 KSDKKAAKIYRRAVELGDVQAIVNLGTLYVTGSGVKLDKKKAE-ELFRMAADRGDAFAQC 272
Query: 174 NLGI----SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
NLG EEA + A+ G A+ L C G G + + ++AA+ + RA E
Sbjct: 273 NLGFLLDSEQRFEEAFRYYALAADQGDTGAECNLGCCYRDGDGTEQSAKKAAKLFRRAVE 332
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
G +RAM +L Y GEG+ S+++A + + AAD G Q G EG+ + A
Sbjct: 333 RGNLRAMCALALLYVHGEGVKQSNQKANQLYRIAADRGSALGQCNLGSRYALEGKFVDAA 392
Query: 290 VYLELATRAGETAAD 304
Y +L+ G + A+
Sbjct: 393 RYYKLSAEQGYSKAE 407
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 101/258 (39%), Gaps = 49/258 (18%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI 157
L + ++ G + G GV+ + KA + F A RG A + G + + E A
Sbjct: 229 LGDVQAIVNLGTLYVTGSGVKLDKKKAEELFRMAADRGDAFAQCNLGFLLDSEQRFEEAF 288
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR 209
Y AA GD + NLG Y ++A KL +A G++RA LAL
Sbjct: 289 RYYALAADQGDTGAECNLGCCYRDGDGTEQSAKKAAKLFRRAVERGNLRAMCALALLYVH 348
Query: 210 GRGVDFNLQ--------------------------------EAARWYLRAAEGGYVRAMY 237
G GV + Q +AAR+Y +AE GY +A +
Sbjct: 349 GEGVKQSNQKANQLYRIAADRGSALGQCNLGSRYALEGKFVDAARYYKLSAEQGYSKAEF 408
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF---------TEGEMMKA 288
N + CY G+G+ A++W RA+ G A GL T M +A
Sbjct: 409 NLAQCYHHGDGVERDLEIAKRWFARASAKGDSDAMYSLGLCCVDLSGEVTQNTAEHMREA 468
Query: 289 VVYLELATRAGETAADHV 306
+ +LE A AG A V
Sbjct: 469 IRWLESAVAAGHETAGKV 486
>gi|296106681|ref|YP_003618381.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
gi|295648582|gb|ADG24429.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
Length = 342
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
E M G + G+GV ++ KA+ F K A + ++ ++ G+MY +
Sbjct: 76 EVMAQRNLGLMYAAGKGVPQDNGKAMQWFRKAALQNDAVSQLNLGVMYQKGMGTQQNDRE 135
Query: 156 AISLYRQAAVLGDPAGQFNLGISY-LQE-------EAVKLLYQASIAGHVRAQYQLALCL 207
AI +AA G P + +LGI Y + E EA K L++A+ AQY LA+
Sbjct: 136 AIKWIHKAAAQGFPEAERSLGILYSIAENGQQNYVEAFKWLHKAAEKEDAIAQYNLAVMY 195
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV N EA +W+ +A + G + A L Y+ G + QA KW + AA G
Sbjct: 196 VTGKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMYATGSNVQQDDFQAMKWFRLAAKQG 255
Query: 268 HGKAQLEHGLGLFTEGEMM----KAVVYLELATRAGETAADHV 306
AQ G+G ++ KA+ + LA G A +V
Sbjct: 256 DAVAQYNIGMGFLNGKGVIRNHTKALKWFHLAASQGLPQAQYV 298
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 32/163 (19%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDP 169
G+GVR+N +A+ F K G +A GLMY + A+ +R AA GD
Sbjct: 198 GKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMYATGSNVQQDDFQAMKWFRLAAKQGDA 257
Query: 170 AGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Q+N+G+ +L G+GV N +A +W+ AA
Sbjct: 258 VAQYNIGMGFL----------------------------NGKGVIRNHTKALKWFHLAAS 289
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
G +A Y + Y G LP + +A KW+++AA GH +AQ
Sbjct: 290 QGLPQAQYVLAALYHDGVSLPQNSMEAIKWLRKAAAQGHLQAQ 332
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 169 PAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P+ N G+ Y+ EAVK +A+ G V AQ L L G+GV + +A
Sbjct: 41 PSAWNNRGVDYVIGKRVAQNDSEAVKWFCKAAKQGEVMAQRNLGLMYAAGKGVPQDNGKA 100
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+W+ +AA + N + Y G G + R+A KW+ +AA G +A E LG+
Sbjct: 101 MQWFRKAALQNDAVSQLNLGVMYQKGMGTQQNDREAIKWIHKAAAQGFPEA--ERSLGIL 158
>gi|110641883|ref|YP_669613.1| hypothetical protein ECP_1709 [Escherichia coli 536]
gi|191171699|ref|ZP_03033246.1| putative TPR repeat protein [Escherichia coli F11]
gi|422377177|ref|ZP_16457420.1| DnaJ domain protein [Escherichia coli MS 60-1]
gi|433077845|ref|ZP_20264396.1| hypothetical protein WIU_01716 [Escherichia coli KTE131]
gi|110343475|gb|ABG69712.1| putative TPR repeat protein [Escherichia coli 536]
gi|190908029|gb|EDV67621.1| putative TPR repeat protein [Escherichia coli F11]
gi|324011514|gb|EGB80733.1| DnaJ domain protein [Escherichia coli MS 60-1]
gi|431597516|gb|ELI67422.1| hypothetical protein WIU_01716 [Escherichia coli KTE131]
Length = 649
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 331 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 390
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P Q +L G+ E+A K +++ G+ AQY LA GRGVD
Sbjct: 391 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 451 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 510
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 511 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 554
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQAAVLGDPAGQFNLGIS 178
K L S+ + A +G+++ D G MY+ E+ KK+ + Y ++A G+ NL +
Sbjct: 310 KKLTSYKRAAQQGNSVFQNDLGAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALM 369
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR-GRGVDFNLQEAARWYLRAAE 229
Y ++A+ L A+ H AQ+ LA C++R G GV+ + ++A +W ++AE
Sbjct: 370 YRDGKGVNKNPQKAISLYLNAANKNHPLAQHSLA-CMYRDGEGVEVDDEQAFKWCQKSAE 428
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GY A Y+ + Y G G+ + ++Q W+ +AD + KA+ G + E+ + +
Sbjct: 429 QGYAEAQYHLATMYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDM 488
Query: 290 VYLELATRAGETAADH 305
+A ++AADH
Sbjct: 489 T---MAINLLKSAADH 501
>gi|402466818|gb|EJW02237.1| hypothetical protein EDEG_03321 [Edhazardia aedis USNM 41457]
Length = 587
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 12/174 (6%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE 154
+ + + G ++ G+G KNL A + + K A G+ G Y E +K +
Sbjct: 199 MHDPVATYNLGYCYEEGKGTEKNLQYAFEWYKKAAEMGNAFGQNSLGFCYEEGIGTEKNQ 258
Query: 155 A-AISLYRQAAVLGDPAGQFNL------GISYLQEEAVKLLY--QASIAGHVRAQYQLAL 205
A A+ LY +A G P Q NL GI ++ + L+ +A+ G RAQ+ L
Sbjct: 259 AIALQLYMMSAEQGYPWAQSNLAYCYQKGIGTAKDYVLSCLWYKKAAYQGLSRAQHNLGH 318
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
C +G GV + ++A WYL+AAE V A ++ C+ G+G+P + ++A K+
Sbjct: 319 CYQQGLGVKKDKKQAVLWYLKAAEQNNVYAFHSLGNCFQNGDGVPKNEKEAVKY 372
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + GV+KN + + + A + + A+ G Y E +++K+A Y+
Sbjct: 137 GGCYHDALGVKKNPKLCIYWYKRSAEQDNPCAIGILGYCYLEGFGVPLNEKKA-FECYKT 195
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA++ DP +NLG Y + + A + +A+ G+ Q L C G G +
Sbjct: 196 AALMHDPVATYNLGYCYEEGKGTEKNLQYAFEWYKKAAEMGNAFGQNSLGFCYEEGIGTE 255
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N A + Y+ +AE GY A N + CY G G + + W K+AA G +AQ
Sbjct: 256 KNQAIALQLYMMSAEQGYPWAQSNLAYCYQKGIGTAKDYVLSCLWYKKAAYQGLSRAQ-- 313
Query: 275 HGLG 278
H LG
Sbjct: 314 HNLG 317
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 98 LREAMV--LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----M 150
+RE V L+ ++ G GV N + + + LK A ++ A + E +
Sbjct: 377 VRENFVPSLISLSFCYRLGTGVDVNPEMSFNYMLKAACLNNSYAQNCLAFFFEEGFGTPV 436
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQ 202
+ +EA I Y ++A +P Q NLG Y + E+AV+L A+ GH RA +
Sbjct: 437 NIQEA-IKWYEKSAEQNNPWAQCNLGCIYFEGQEVTMNREKAVRLFIAAANQGHTRAYNK 495
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
L C G ++ + +A Y +A GY RA YN C G G
Sbjct: 496 LGYCYEEGIVLEKDPIKAFDLYNKACRKGYNRAYYNLGRCLENGIG 541
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 16/240 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEAAISLYRQAA 164
G ++ G GV+K+ +A+ +LK A + + A G + D K E Y A
Sbjct: 317 GHCYQQGLGVKKDKKQAVLWYLKAAEQNNVYAFHSLGNCFQNGDGVPKNEKEAVKYYMLA 376
Query: 165 VLGD--PA-------GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
V + P+ + G+ E + + +A+ + AQ LA G G
Sbjct: 377 VRENFVPSLISLSFCYRLGTGVDVNPEMSFNYMLKAACLNNSYAQNCLAFFFEEGFGTPV 436
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N+QEA +WY ++AE A N Y G+ + ++ +A + AA+ GH +A +
Sbjct: 437 NIQEAIKWYEKSAEQNNPWAQCNLGCIYFEGQEVTMNREKAVRLFIAAANQGHTRAYNKL 496
Query: 276 GL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 331
G G+ E + +KA A R G A + L+ +D + + ++
Sbjct: 497 GYCYEEGIVLEKDPIKAFDLYNKACRKGYNRAYYNLGRCLENGIGCQKDVDISLCSFYKG 556
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 23/171 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKK 153
EA+ +L + F G GV K++ +A ++ + LA+V + ++D++
Sbjct: 44 EALSILSFCYEF--GIGVNKDIKEAEKGYIIAGEKEVGLALVRLTFLRRFGRPGIKIDRR 101
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
EA ++ +G + IS+L+ +AS G+ AQY L C H GV
Sbjct: 102 EAQ-EMFNTLQKIGKKS------ISWLE--------KASNYGNSYAQYCLGGCYHDALGV 146
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
N + WY R+AE A+ CY G G+PL+ ++A + K AA
Sbjct: 147 KKNPKLCIYWYKRSAEQDNPCAIGILGYCYLEGFGVPLNEKKAFECYKTAA 197
>gi|375105138|ref|ZP_09751399.1| TPR repeat-containing protein [Burkholderiales bacterium JOSHI_001]
gi|374665869|gb|EHR70654.1| TPR repeat-containing protein [Burkholderiales bacterium JOSHI_001]
Length = 344
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 19/243 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAAISLYRQAA 164
G + GRG+ ++ A D + K A +G A + G +Y + K EA L+ + A
Sbjct: 96 GVMLQAGRGLARDPAAAADWYRKAADQGHASAAHNLGGLYLSGNGVKKDEAQALLWLRKA 155
Query: 165 VLGDPAGQFN---------LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
G G N +G++ A K QA+ AG A + LA RG GV
Sbjct: 156 ADGGNVGAINKIGLMYRIGMGVAKDPTAAFKWFDQAAAAGEPMAMFNLAGTYERGEGVAK 215
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ A W R+A GGY A ++ +L Y G+G+ S + +W++ AA+ G +AQ
Sbjct: 216 DDAAALEWTQRSANGGYPAAQFDLALRYREGKGVSKSTGEEVRWLRAAAERGWARAQGLL 275
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
G+ ++EG + ++A V+L L R G D ++ + L+ R+RA + W+
Sbjct: 276 GI-YYSEGRGVAKDPVQACVWLSLGAREGAALMD-LRKLECGALNPEGRERADKLTREWQ 333
Query: 331 AMP 333
+P
Sbjct: 334 PIP 336
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCL 207
A+ + R AA GDP Q LG Y+ +AV +A+ G+V QY + + L
Sbjct: 40 AVQILRTAAEQGDPDAQAGLGSFYVYGVGVPRDDGQAVNWYRKAAAQGNVEGQYNMGVML 99
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRG+ + AA WY +AA+ G+ A +N Y G G+ QA W+++AAD G
Sbjct: 100 QAGRGLARDPAAAADWYRKAADQGHASAAHNLGGLYLSGNGVKKDEAQALLWLRKAADGG 159
Query: 268 H----GKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
+ K L + +G+ + A + + A AGE A
Sbjct: 160 NVGAINKIGLMYRIGMGVAKDPTAAFKWFDQAAAAGEPMA 199
>gi|268608125|ref|ZP_06141852.1| hypothetical protein RflaF_01309 [Ruminococcus flavefaciens FD-1]
Length = 520
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 114 GRGVRKNLDKA---------------LDSFLKGAARGSTLAMVDAGLMYW-----EMDKK 153
G G++KN+D A +D + A GS A G +YW D
Sbjct: 228 GTGLKKNIDTAEKLSERYGIPLSVSEIDELTEKAKSGSADAQFRLGNIYWLGSGTAADHA 287
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLAL 205
EA + Y+ AA GDP ++L Y Q +A +L +A++ G A LA
Sbjct: 288 EA-VKWYKMAADNGDPNAIYSLACCYYKGDGIPCDQSKAAELFMKAALQGDRDALNNLAK 346
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
C G GV + +AA ++ +AAE G+ A YN + C+ G G +++++A W K+AA+
Sbjct: 347 CYFMGEGVTRSRSKAAGYFRKAAESGHTAAQYNLAECFFHGWGEDVNYKKAIMWYKKAAE 406
Query: 266 CGHGKAQLEHG 276
+AQ +G
Sbjct: 407 QSMPEAQYSYG 417
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 16/215 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLY 160
R G + G G + +A+ + A G A+ Y++ D + A L+
Sbjct: 270 FRLGNIYWLGSGTAADHAEAVKWYKMAADNGDPNAIYSLACCYYKGDGIPCDQSKAAELF 329
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRG 212
+AA+ GD NL Y E V +A+ +GH AQY LA C G G
Sbjct: 330 MKAALQGDRDALNNLAKCYFMGEGVTRSRSKAAGYFRKAAESGHTAAQYNLAECFFHGWG 389
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
D N ++A WY +AAE A Y+ C G G+ +A++ + AA + A+
Sbjct: 390 EDVNYKKAIMWYKKAAEQSMPEAQYSYGWCCLNGLGIQRDLCEAKRMFEAAASQNYTPAK 449
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
G G+ T + AV + A G+ A
Sbjct: 450 KMLGYCWMNGMGTAKNLTTAVEWFGKAANRGDAEA 484
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 94/241 (39%), Gaps = 70/241 (29%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTL--------------AMVDAGLM------- 146
G+RF +GRGV+++ +KA+ + + + RG A D L
Sbjct: 149 GERFYYGRGVKQDYEKAVYWYTQSSDRGDCSSQKKLAECLRLGQGAPQDCALAAKRYTQA 208
Query: 147 --YWEMDKKEAAISLYR---------------------------------QAAVLGDPAG 171
+ D ++A I LY+ + A G
Sbjct: 209 AEQGDYDSQKALILLYQNGGTGLKKNIDTAEKLSERYGIPLSVSEIDELTEKAKSGSADA 268
Query: 172 QFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
QF LG Y EAVK A+ G A Y LA C ++G G+ + +AA
Sbjct: 269 QFRLGNIYWLGSGTAADHAEAVKWYKMAADNGDPNAIYSLACCYYKGDGIPCDQSKAAEL 328
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGL 277
+++AA G A+ N + CY GEG+ S +A + ++AA+ GH AQ HG
Sbjct: 329 FMKAALQGDRDALNNLAKCYFMGEGVTRSRSKAAGYFRKAAESGHTAAQYNLAECFFHGW 388
Query: 278 G 278
G
Sbjct: 389 G 389
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 18/190 (9%)
Query: 80 QLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA 139
Q +AA L K+ AL+ R+A+ L K + G GV ++ KA F K A G T A
Sbjct: 322 QSKAAELFMKA---ALQGDRDALNNL--AKCYFMGEGVTRSRSKAAGYFRKAAESGHTAA 376
Query: 140 MVDAGLMY---WEMD-KKEAAISLYRQAAVLGDPAGQFN--------LGISYLQEEAVKL 187
+ + W D + AI Y++AA P Q++ LGI EA ++
Sbjct: 377 QYNLAECFFHGWGEDVNYKKAIMWYKKAAEQSMPEAQYSYGWCCLNGLGIQRDLCEAKRM 436
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
A+ + A+ L C G G NL A W+ +AA G A +CY +G
Sbjct: 437 FEAAASQNYTPAKKMLGYCWMNGMGTAKNLTTAVEWFGKAANRGDAEAAEMMVVCYKYG- 495
Query: 248 GLPLSHRQAR 257
G L +A+
Sbjct: 496 GEYLEKNEAK 505
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 31/174 (17%)
Query: 159 LYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRG 210
L+R+A GD FNLG + E+AV Q+S G +Q +LA CL G
Sbjct: 133 LFRKAES-GDNDACFNLGERFYYGRGVKQDYEKAVYWYTQSSDRGDCSSQKKLAECLRLG 191
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-----------------EGLPLSH 253
+G + AA+ Y +AAE G + L Y G G+PLS
Sbjct: 192 QGAPQDCALAAKRYTQAAEQGDYDSQKALILLYQNGGTGLKKNIDTAEKLSERYGIPLSV 251
Query: 254 RQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 303
+ + ++A G AQ G LG T + +AV + ++A G+ A
Sbjct: 252 SEIDELTEKAKS-GSADAQFRLGNIYWLGSGTAADHAEAVKWYKMAADNGDPNA 304
>gi|329851658|ref|ZP_08266415.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
gi|328840504|gb|EGF90076.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
Length = 712
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 134 RGSTLAMVDAGLMYWEMDKKEA---AISLYRQAAVLGDPAGQFNLGISYLQEEAVKL--- 187
RGS AM G +Y+ + + +A A+ R+A+ G+ +LG +Y V +
Sbjct: 477 RGSPRAMRKLGALYFTLQQPDASQQAVKWLREASRHGETDAYIDLGRAYASGAGVPVDAA 536
Query: 188 -----LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+A+ AG++ ++ G GV N Q AA +LRAA G AM S
Sbjct: 537 RAFTFFEEAADAGNLTGLIEMGRSYATGYGVARNPQRAAELFLRAANAGSAEAMIMLSYS 596
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y G+G+P S +AR W+KR AD G +AQ +GL
Sbjct: 597 YEVGDGVPQSLPEARAWLKRGADSGDAEAQYWYGL 631
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 15/137 (10%)
Query: 128 FLKGAAR-GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ 181
+L+ A+R G T A +D G Y +D A + + +AA G+ G +G SY
Sbjct: 505 WLREASRHGETDAYIDLGRAYASGAGVPVDAARA-FTFFEEAADAGNLTGLIEMGRSYAT 563
Query: 182 --------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+ A +L +A+ AG A L+ G GV +L EA W R A+ G
Sbjct: 564 GYGVARNPQRAAELFLRAANAGSAEAMIMLSYSYEVGDGVPQSLPEARAWLKRGADSGDA 623
Query: 234 RAMYNTSLCYSFGEGLP 250
A Y L G G P
Sbjct: 624 EAQYWYGLYMLDGRGGP 640
>gi|46446343|ref|YP_007708.1| hypothetical protein pc0709 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399984|emb|CAF23433.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 309
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 12/178 (6%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQ 162
+G R+ +G+GV ++ +A F A + A G MY + A Y+
Sbjct: 116 FGLRYINGQGVAQSDQEAFKYFQLAANQNYADAQYSLGCMYENGQGVAQSDQNAAQCYQL 175
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA Q+NLG+ Y+ +EA + A+ GH +AQ+ L G+GV+
Sbjct: 176 AANQNHVKAQYNLGVMYMHGQGVAQSDQEAARYYQLAAKQGHAKAQFSLGFIYAHGKGVE 235
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ Q+A ++Y RAA+ G A N + YS G G+P S ++A ++ + AAD G AQ
Sbjct: 236 QSDQKAVKYYQRAAKQGNASAQCNLGVMYSSGRGVPQSDQEAARYYQLAADQGDLIAQ 293
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
VKLL + G ++QY L G+GV + QEA +++ AA Y A Y+ Y
Sbjct: 101 VKLL---ADQGDAKSQYLFGLRYINGQGVAQSDQEAFKYFQLAANQNYADAQYSLGCMYE 157
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAG 299
G+G+ S + A + + AA+ H KAQ G+ ++ G+ + +A Y +LA + G
Sbjct: 158 NGQGVAQSDQNAAQCYQLAANQNHVKAQYNLGV-MYMHGQGVAQSDQEAARYYQLAAKQG 216
Query: 300 ETAA 303
A
Sbjct: 217 HAKA 220
>gi|354594421|ref|ZP_09012460.1| hypothetical protein CIN_11560 [Commensalibacter intestini A911]
gi|353672097|gb|EHD13797.1| hypothetical protein CIN_11560 [Commensalibacter intestini A911]
Length = 432
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 49/222 (22%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYR----QAAVL 166
+ H +GV K+L+KA + + A +G+ LMYW + E S R +AA
Sbjct: 194 YIHAKGVEKDLEKAREYYSLSARQGNMQGEYQLALMYWNGEGGEEDHSKARGYCEKAAYQ 253
Query: 167 GDPAGQFNLGISYLQEEAVKLLY------------------------------------- 189
G+ ++ +G Y + V + Y
Sbjct: 254 GEVNAEYFMGNIYYYGQGVSVDYKRAAYFYEKAARQDHGEAQNMIGYMYSEGQGVSKDYK 313
Query: 190 -------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
QA+ +V+AQY L G+ V NL EA W+ +AA+ GYV A +N +
Sbjct: 314 LAIYWYEQAAARHNVQAQYSLGYIYLTGQIVKLNLTEAFEWFYKAADNGYVLAQFNLGVM 373
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
Y G+G+P ++ QA W ++A D GH K+ G ++ EG+
Sbjct: 374 YYKGDGVPQNYEQAVVWFQKAVDQGHKKSSFILGK-MYIEGQ 414
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 15/197 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA 155
A + G+ + G + +N +KA + F + A +G A+++ G+MY+E D +A
Sbjct: 112 AKAMFALGRIYIMGHLLEQNYEKAREYFEQSARQGEVEALLNLGMMYYEGVGVSQDYSKA 171
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
+ L QAA G Q NL Y+ E+A + ++ G+++ +YQLAL
Sbjct: 172 RVYL-EQAAQKGAAEAQNNLAYMYIHAKGVEKDLEKAREYYSLSARQGNMQGEYQLALMY 230
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G + + +A + +AA G V A Y Y +G+G+ + +++A + ++AA
Sbjct: 231 WNGEGGEEDHSKARGYCEKAAYQGEVNAEYFMGNIYYYGQGVSVDYKRAAYFYEKAARQD 290
Query: 268 HGKAQLEHGLGLFTEGE 284
HG+AQ G +++EG+
Sbjct: 291 HGEAQNMIGY-MYSEGQ 306
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+GV + +A + K A + A G MY E D K AI Y Q
Sbjct: 263 GNIYYYGQGVSVDYKRAAYFYEKAARQDHGEAQNMIGYMYSEGQGVSKDYK-LAIYWYEQ 321
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRGVD 214
AA + Q++LG YL + VKL Y+A+ G+V AQ+ L + ++G GV
Sbjct: 322 AAARHNVQAQYSLGYIYLTGQIVKLNLTEAFEWFYKAADNGYVLAQFNLGVMYYKGDGVP 381
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
N ++A W+ +A + G+ ++ + Y G+G+ H
Sbjct: 382 QNYEQAVVWFQKAVDQGHKKSSFILGKMYIEGQGVAHDH 420
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 16/231 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G GV ++ KAL F A RG+ AM G +Y E A + Q+A
Sbjct: 86 YYEGLGVEQDDKKALVLFDDAAKRGNAKAMFALGRIYIMGHLLEQNYEKAREYFEQSARQ 145
Query: 167 GDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ NLG+ Y + V Y QA+ G AQ LA +GV+ +L+
Sbjct: 146 GEVEALLNLGMMYYEGVGVSQDYSKARVYLEQAAQKGAAEAQNNLAYMYIHAKGVEKDLE 205
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-L 277
+A +Y +A G ++ Y +L Y GEG H +AR + ++AA G A+ G +
Sbjct: 206 KAREYYSLSARQGNMQGEYQLALMYWNGEGGEEDHSKARGYCEKAAYQGEVNAEYFMGNI 265
Query: 278 GLFTEG---EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ +G + +A + E A R A ++ + + S+D + +
Sbjct: 266 YYYGQGVSVDYKRAAYFYEKAARQDHGEAQNMIGYMYSEGQGVSKDYKLAI 316
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A +L +A+ GHV++ LAL + G GV+ + ++A + AA+ G +AM+ Y
Sbjct: 63 ARELFEKAAAGGHVQSILYLALIYYEGLGVEQDDKKALVLFDDAAKRGNAKAMFALGRIY 122
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRA 298
G L ++ +AR++ +++A G +A L G+ ++ EG + KA VYLE A +
Sbjct: 123 IMGHLLEQNYEKAREYFEQSARQGEVEALLNLGM-MYYEGVGVSQDYSKARVYLEQAAQK 181
Query: 299 GETAADHVKNVILQQLSATSRDRAM 323
G AA+ N+ + A ++ +
Sbjct: 182 G--AAEAQNNLAYMYIHAKGVEKDL 204
>gi|406876717|gb|EKD26186.1| hypothetical protein ACD_79C01317G0003 [uncultured bacterium]
Length = 282
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTL---AMVDAGLMYWEMDKK--EAAISLYRQ 162
G ++ G VRKN K+ + F KG S+ + DA Y E KK + A Y
Sbjct: 25 GYYYREGIHVRKNHRKSFEYFKKGIELNSSYLIWCLADA-YAYGEGTKKNLKNAFKYYLL 83
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA LG+P LG+ Y ++A+K A+ + A + L LC G GV
Sbjct: 84 AAKLGEPEAITTLGVCYFYGKGIKKNVKKAIKYYRLATKGKDICAYFNLGLCYEWGDGVK 143
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
N ++A ++L+AA G+ R++Y CY G+G+ ++++A KW K++A
Sbjct: 144 KNNKKAFEFFLKAAHLGHSRSLYKVGKCYVEGKGVTKNYKEALKWFKKSA 193
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEA--AISLYRQAAVL 166
+ +G G +KNL A +L A G A+ G+ Y+ + KK AI YR A
Sbjct: 64 YAYGEGTKKNLKNAFKYYLLAAKLGEPEAITTLGVCYFYGKGIKKNVKKAIKYYRLATKG 123
Query: 167 GDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
D FNLG+ Y + VK +A+ GH R+ Y++ C G+GV N +
Sbjct: 124 KDICAYFNLGLCYEWGDGVKKNNKKAFEFFLKAAHLGHSRSLYKVGKCYVEGKGVTKNYK 183
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
EA +W+ ++A A+ +C+ G G+ +++ ++ K+A G A GL
Sbjct: 184 EALKWFKKSALEKDPEALSYLGICFHNGWGVKKDFKKSIEYCKKALSLGDDIANYNLGL- 242
Query: 279 LFTEGEMMKAVV 290
+ +GE +K +
Sbjct: 243 CYLDGEGVKKNI 254
>gi|225575064|ref|ZP_03783674.1| hypothetical protein RUMHYD_03153 [Blautia hydrogenotrophica DSM
10507]
gi|225037734|gb|EEG47980.1| Sel1 repeat protein [Blautia hydrogenotrophica DSM 10507]
Length = 521
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G G ++ +A+ + K A + ++ G Y+ E+A+ Y+ +
Sbjct: 263 GNCYYYGWGTEQDYSEAVKWYQKSADQDNSYGQYMLGECYYNGFGATQDYESAVKWYQAS 322
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A +P GQ LG Y EEA + +A+ G+ Q +L C G GV+
Sbjct: 323 AEQDNPYGQVGLGTCYFFGDGTEANFEEAAQWYEKAAKQGNAVGQNELGACYSSGLGVEE 382
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A W+ +AA G+ + YN Y GEG+ +++A +W ++AA+ G AQ E
Sbjct: 383 DAAKAVEWFQKAANQGHAVSQYNLGKHYYDGEGVERDYQKAVQWYEKAANQGDADAQREL 442
Query: 276 GLGLF----TEGEMMKAVVYLELATRAGETAA 303
G + E + AV + E A G+ +A
Sbjct: 443 GNCYYDGKGVEQDYETAVEWYEKAAEQGDMSA 474
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G G N ++A + K A +G+ + + G Y E D +A + +++
Sbjct: 335 GTCYFFGDGTEANFEEAAQWYEKAAKQGNAVGQNELGACYSSGLGVEEDAAKA-VEWFQK 393
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVD 214
AA G Q+NLG Y E V+ YQ ++ G AQ +L C + G+GV+
Sbjct: 394 AANQGHAVSQYNLGKHYYDGEGVERDYQKAVQWYEKAANQGDADAQRELGNCYYDGKGVE 453
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ + A WY +AAE G + A CY G+G+ R+A +W+ R D
Sbjct: 454 QDYETAVEWYEKAAEQGDMSAQEKLIQCYRNGKGVEKDERKAVEWISRLND 504
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G+ + +G G ++ + A+ + A + + V G Y+ D EA A Y +A
Sbjct: 299 GECYYNGFGATQDYESAVKWYQASAEQDNPYGQVGLGTCYFFGDGTEANFEEAAQWYEKA 358
Query: 164 AVLGDPAGQFNLGISY-----LQEEA---VKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ GQ LG Y ++E+A V+ +A+ GH +QY L + G GV+
Sbjct: 359 AKQGNAVGQNELGACYSSGLGVEEDAAKAVEWFQKAANQGHAVSQYNLGKHYYDGEGVER 418
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ Q+A +WY +AA G A CY G+G+ + A +W ++AA+ G AQ
Sbjct: 419 DYQKAVQWYEKAANQGDADAQRELGNCYYDGKGVEQDYETAVEWYEKAAEQGDMSAQ 475
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 173 FNLGISYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
+ GI Q+ EA K +A+ GH AQ L C ++G+GV N + AA+WY +AA+
Sbjct: 158 YEYGIEVDQDYTEAAKWYEKAAEQGHDGAQNSLGDCYYKGQGVPQNYETAAKWYQKAADQ 217
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMM 286
A + CY G G+ + A KW ++AD G+ AQ G G TE +
Sbjct: 218 ENFYAQSSLGSCYREGNGVERDYAAAMKWYGKSADQGYSYAQYYLGNCYYYGWGTEQDYS 277
Query: 287 KAVVYLE 293
+AV + +
Sbjct: 278 EAVKWYQ 284
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
+ D EAA Y +AA G Q +LG Y + E A K +A+ + AQ
Sbjct: 165 DQDYTEAA-KWYEKAAEQGHDGAQNSLGDCYYKGQGVPQNYETAAKWYQKAADQENFYAQ 223
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
L C G GV+ + A +WY ++A+ GY A Y CY +G G + +A KW
Sbjct: 224 SSLGSCYREGNGVERDYAAAMKWYGKSADQGYSYAQYYLGNCYYYGWGTEQDYSEAVKWY 283
Query: 261 KRAAD 265
+++AD
Sbjct: 284 QKSAD 288
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G+ +++G V ++ +A + K A +G A G Y++ E A Y++A
Sbjct: 155 GRAYEYGIEVDQDYTEAAKWYEKAAEQGHDGAQNSLGDCYYKGQGVPQNYETAAKWYQKA 214
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A + Q +LG Y + V+ Y A++ G+ AQY L C + G G +
Sbjct: 215 ADQENFYAQSSLGSCYREGNGVERDYAAAMKWYGKSADQGYSYAQYYLGNCYYYGWGTEQ 274
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EA +WY ++A+ Y CY G G + A KW + +A+ + Q+
Sbjct: 275 DYSEAVKWYQKSADQDNSYGQYMLGECYYNGFGATQDYESAVKWYQASAEQDNPYGQVGL 334
Query: 276 GLGLF----TEGEMMKAVVYLELATRAG 299
G F TE +A + E A + G
Sbjct: 335 GTCYFFGDGTEANFEEAAQWYEKAAKQG 362
>gi|197251446|ref|YP_002145630.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|440762173|ref|ZP_20941238.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440768920|ref|ZP_20947883.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440772288|ref|ZP_20951193.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|197215149|gb|ACH52546.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|436416084|gb|ELP13996.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|436418772|gb|ELP16653.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436424122|gb|ELP21910.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
Length = 331
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
GK ++ G GV KN A + + A +G A + MYW+ + L Y ++
Sbjct: 143 GKMYEGGDGVEKNHQLAFYWYKQAALQGDATAQENLADMYWDGRGTTKNLRLATLWYLRS 202
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A+ + QF LG +Y + E VK YQ A+ G A + +G GV+
Sbjct: 203 ALQDEVHSQFQLGCAYSEGEGVKQDYQQAMHWYQQAAAQGDSNAYVNIGWMYKQGHGVER 262
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +EA W+ RAAE G V A YN Y G G + +QA W K+A G
Sbjct: 263 DDEEALSWFHRAAEAGNVTAWYNLGFMYRDGRGTAVDVKQALYWFKKAQPTG 314
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 88/215 (40%), Gaps = 22/215 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G R+ K+ KA K A +G LA D G W ++ + A+ Y
Sbjct: 71 GLRYSDTPTSMKDNAKASYWLEKAAKQGHKLAPNDLG---WVLEGETGSEPDYAQAVFWY 127
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRG 212
R G Q NLG Y + V+ +Q A++ G AQ LA GRG
Sbjct: 128 RVGTERGHSYAQNNLGKMYEGGDGVEKNHQLAFYWYKQAALQGDATAQENLADMYWDGRG 187
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
NL+ A WYLR+A V + + YS GEG+ ++QA W ++AA G A
Sbjct: 188 TTKNLRLATLWYLRSALQDEVHSQFQLGCAYSEGEGVKQDYQQAMHWYQQAAAQGDSNAY 247
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
+ G G E + +A+ + A AG A
Sbjct: 248 VNIGWMYKQGHGVERDDEEALSWFHRAAEAGNVTA 282
>gi|307610058|emb|CBW99593.1| hypothetical protein LPW_13631 [Legionella pneumophila 130b]
Length = 376
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 20/221 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVAASDDKAFIWFKKAAEQGYSKAQVNLGYQY-MMGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAGQFNLGISYLQEE---------AVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA GD G+++LG+ Y +E A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGVSADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
D + +AA WY AAE G A G G+ ++QA W ++A G+ Q
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQA 305
Query: 274 EHGL----GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 309
+ G GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 28/186 (15%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ G+S EA K +A+ G+ AQ + L G GV +
Sbjct: 95 ----------DTGK---GVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDD 141
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A W+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LG
Sbjct: 142 KAFIWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLG 199
Query: 279 LFTEGE 284
L G+
Sbjct: 200 LLYTGQ 205
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q+ G++ EEA +A+ + AQ L G+GV + EA +WY++AAE G
Sbjct: 59 QYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQG 118
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMK 287
A N L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ K
Sbjct: 119 NPIAQRNIGLMYATGDGVAASDDKAFIWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKK 178
Query: 288 AVVYLELATRAGETAADHVKNVIL--QQLSATSRDRA 322
A + + A G+ ++ ++ Q+ ++ D+A
Sbjct: 179 AFEWYQKAAEQGDEKGEYSLGLLYTGQEGGVSADDKA 215
>gi|114776923|ref|ZP_01451966.1| hypothetical protein SPV1_11926 [Mariprofundus ferrooxydans PV-1]
gi|114553009|gb|EAU55440.1| hypothetical protein SPV1_11926 [Mariprofundus ferrooxydans PV-1]
Length = 633
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ GRG RKN +AL +K AA G+T A K+ ++ A GD
Sbjct: 147 YAEGRGARKNDAEALAWAIKAAAGGNTEAR----------SFKQQLLNRVTAQASAGDAT 196
Query: 171 GQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
QF L + Y Q ++A L Q+++ G+V AQ+ LA L G D N QEAA
Sbjct: 197 AQFVLAMLYQQGQGLTADMQQAESWLRQSAVQGNVEAQFHLAELLISREG-DANAQEAAA 255
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
WYL+AA +V+A + Y+ G G+ +++A W+ AA G +AQ G+
Sbjct: 256 WYLKAANQKHVKAAAAIGVLYATGRGIKQDNQKALHWLNIAATAGDVRAQANLGIMYAES 315
Query: 283 GEMMKAVVYLELATRAGETAADH 305
GE +A+ +L A +AG T A++
Sbjct: 316 GEDAQAIHWLTEAAKAGLTDAEN 338
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHR 209
E AI+ Y++AA G+ +NL + Y ++E A +L +A+ AG AQ +A R
Sbjct: 426 EDAITWYQKAAEQGNADAMYNLAVLYYRKEDAARAFELFERAAKAGDSEAQNIIASMYQR 485
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
+G FN+ +A WY +AA+ GY A +N Y G+G+ +A W K+AA+ G
Sbjct: 486 AQGTAFNMPQAIAWYEKAAQSGYAPAQFNLGNLYRKGDGVEQKDSKALYWYKKAAESGFA 545
Query: 270 KAQ 272
AQ
Sbjct: 546 PAQ 548
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNL- 175
V N + A+ + K A +G+ AM + ++Y+ + A L+ +AA GD Q +
Sbjct: 421 VVTNSEDAITWYQKAAEQGNADAMYNLAVLYYRKEDAARAFELFERAAKAGDSEAQNIIA 480
Query: 176 -------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
G ++ +A+ +A+ +G+ AQ+ L +G GV+ +A WY +AA
Sbjct: 481 SMYQRAQGTAFNMPQAIAWYEKAAQSGYAPAQFNLGNLYRKGDGVEQKDSKALYWYKKAA 540
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
E G+ A + Y+ G G+ + +QAR+W ++AA+ G A GL
Sbjct: 541 ESGFAPAQNTLAYMYALGRGVAVDKQQARQWFEKAANQGLSIASQNLGL 589
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 9/219 (4%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + GRG++++ KAL A G A + G+MY E + AI +AA G
Sbjct: 273 GVLYATGRGIKQDNQKALHWLNIAATAGDVRAQANLGIMYAESGEDAQAIHWLTEAAKAG 332
Query: 168 DPAGQFNLGI-SYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+ NL + S L A+ L +A++ H AQY LAL RG G N +
Sbjct: 333 LTDAENNLAVFSALGRGGKPDMRAALGWLKKAAVTDHT-AQYNLALMYLRGIGTIQNDEA 391
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
AA ++ + G RA L Y G G+ + A W ++AA+ G+ A +
Sbjct: 392 AAELLKQSLQDGNPRASLLLGLLYDLGRGVVTNSEDAITWYQKAAEQGNADAMYNLAVLY 451
Query: 280 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATS 318
+ + + +A E A +AG++ A ++ + Q+ T+
Sbjct: 452 YRKEDAARAFELFERAAKAGDSEAQNIIASMYQRAQGTA 490
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
DF+ AA W+ AA+GG +A Y ++ Y G+G+ QA +W++ AA GH +AQ
Sbjct: 47 DFDT--AAEWFKVAAKGGKAQAQYRFAMLYRDGKGVKQDDSQAVRWLQLAAAQGHTEAQY 104
Query: 274 EHGL 277
+ G+
Sbjct: 105 QLGV 108
>gi|260555636|ref|ZP_05827856.1| Sel1 repeat family [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|260410547|gb|EEX03845.1| Sel1 repeat family [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|452948342|gb|EME53821.1| hypothetical protein G347_14658 [Acinetobacter baumannii MSP4-16]
Length = 266
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA+ L G+++ G+ V++N KAL+ F K + +G A D G MY+E +
Sbjct: 39 EALRLYEEGQKYFLGKDVKQNYQKALELFQKASDQGLAEAQNDLGGMYFEGLGTTQDYQK 98
Query: 156 AISLYRQAAVLGDPAGQFNLGISY-----LQEE---AVKLLYQASIAGHVRAQYQLALCL 207
A + AA A Q+NLG+ Y +Q++ A++L ++ G+ +AQY L
Sbjct: 99 AFKYFDSAANQKLAAAQYNLGLMYDKGLYIQKDRKKALELYELSTEQGYAKAQYNLGNAY 158
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV N +A + +AA+ +A YN Y+ GEG+ +++A ++ +AA G
Sbjct: 159 ANGDGVPQNNTKALELFSKAAQQNLPQASYNLGNMYADGEGVTQDNKKALEYFTKAAQQG 218
Query: 268 HGKAQ 272
+AQ
Sbjct: 219 FPQAQ 223
>gi|375263333|ref|YP_005025563.1| Sel1 domain-containing protein [Vibrio sp. EJY3]
gi|369843760|gb|AEX24588.1| Sel1 domain-containing protein [Vibrio sp. EJY3]
Length = 341
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 92 NDALRPL----REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
N L PL ++AM LL G ++ G+GV K+ + A +LK A G A + G Y
Sbjct: 41 NSILEPLADNNKDAMALL--GYMYEMGQGVPKDYNAAATLYLKAAKLGQAKAQFNVGNHY 98
Query: 148 WE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAG 195
+ +AAI+ Y++AA G +G Y EEA + +A+ G
Sbjct: 99 RDGRGGKQDYQAAIAWYKKAAHQGLSIASSEIGALYYTGTGVSQNYEEAFYWMQKAANGG 158
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+AQ L + G GV+ N +EA +W L++A G AM + Y G+ + S +
Sbjct: 159 LAKAQLDLCMMYIHGHGVNINRKEAFQWCLKSAMQGNALAMVQVGVMYLAGKDIEQSDEK 218
Query: 256 ARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADH 305
A W+ AA+ G +AQ G G++ E + KA + A G+ A +
Sbjct: 219 AFTWLMNAANKGVAQAQYNIGNYYLEGIYLEQDYEKAFSWFRKAALQGDPYAQY 272
>gi|149909665|ref|ZP_01898318.1| hypothetical protein PE36_12787 [Moritella sp. PE36]
gi|149807369|gb|EDM67322.1| hypothetical protein PE36_12787 [Moritella sp. PE36]
Length = 1046
Score = 74.7 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G G+ ++ KA + K A A + +MY E DK++AA +LY++AA
Sbjct: 417 YDNGDGIEQDKQKAAALYQKAADLDHPGATSNLAIMYDNGDGIEQDKQKAA-ALYQKAAN 475
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
L P +NL I Y +++A L +A+ GH+ A Y LA+ G G++ +
Sbjct: 476 LDHPGSTYNLAIMYDSSDGIEQDKQKAAALYQKAADLGHLGAMYNLAIMYDIGDGIEQDK 535
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
Q+AA Y +AA+ G+ A N ++ Y G+ + ++A ++AAD GH A L
Sbjct: 536 QKAAALYQKAADLGHPDATCNLAIMYDNGDDIEQDKQKAAALYQKAADLGHSGATL 591
Score = 74.7 bits (182), Expect = 6e-11, Method: Composition-based stats.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G G+ ++ KA + K A A + +MY E DK++AA +LY++AA L
Sbjct: 384 GDGIEQDKQKAAALYQKAADLDHPGATCNLAIMYDNGDGIEQDKQKAA-ALYQKAADLDH 442
Query: 169 PAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P NL I Y +++A L +A+ H + Y LA+ G++ + Q+A
Sbjct: 443 PGATSNLAIMYDNGDGIEQDKQKAAALYQKAANLDHPGSTYNLAIMYDSSDGIEQDKQKA 502
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL--- 277
A Y +AA+ G++ AMYN ++ Y G+G+ ++A ++AAD GH A +
Sbjct: 503 AALYQKAADLGHLGAMYNLAIMYDIGDGIEQDKQKAAALYQKAADLGHPDATCNLAIMYD 562
Query: 278 -GLFTEGEMMKAVVYLELATRAGETAA 303
G E + KA + A G + A
Sbjct: 563 NGDDIEQDKQKAAALYQKAADLGHSGA 589
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ HG G+ ++ KA + K A A + +MY E DK++AA +LY++AA
Sbjct: 201 YDHGDGIEQDKQKAAALYQKAANLDHPGATCNLAIMYDIGDGIEQDKQKAA-ALYQKAAD 259
Query: 166 LGDPAGQFNLGISYLQEEAVK-------LLYQASI-AGHVRAQYQLALCLHRGRGVDFNL 217
L P NL + Y E ++ LYQ ++ GH+ A LA+ H G G++ +
Sbjct: 260 LDHPGATCNLAVMYDHGEGIEQDKQKAAALYQKAVNLGHLGATCNLAVMYHHGDGIEQDK 319
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
Q+AA Y +AA + A N ++ Y GEG+ ++A ++AAD H A
Sbjct: 320 QKAAALYQKAANLDHPGATCNLAVMYDHGEGIEQDKQKAAALYQKAADLDHPGA 373
Score = 70.9 bits (172), Expect = 9e-10, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G G+ ++ KA + K A + + +MY E DK++AA +LY++AA
Sbjct: 453 YDNGDGIEQDKQKAAALYQKAANLDHPGSTYNLAIMYDSSDGIEQDKQKAA-ALYQKAAD 511
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG +NL I Y +++A L +A+ GH A LA+ G ++ +
Sbjct: 512 LGHLGAMYNLAIMYDIGDGIEQDKQKAAALYQKAADLGHPDATCNLAIMYDNGDDIEQDK 571
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Q+AA Y +AA+ G+ A N ++ Y G+G+ ++A ++AAD GH A L +
Sbjct: 572 QKAAALYQKAADLGHSGATLNLAIMYDSGDGIEQDKQKAADLYQKAADLGHSGATLNLAI 631
Query: 278 GLFTEGE-----MMKAVVYLELATRAG 299
++ +G+ + K++ E A G
Sbjct: 632 -MYNDGDGIEQNIQKSISLFERAIELG 657
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 16/173 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G G+ ++ KA + K A G A + +MY E DK++AA +LY++AA LG
Sbjct: 528 GDGIEQDKQKAAALYQKAADLGHPDATCNLAIMYDNGDDIEQDKQKAA-ALYQKAADLGH 586
Query: 169 PAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
NL I Y +++A L +A+ GH A LA+ + G G++ N+Q++
Sbjct: 587 SGATLNLAIMYDSGDGIEQDKQKAADLYQKAADLGHSGATLNLAIMYNDGDGIEQNIQKS 646
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ RA E G + +MY L Y G+ +++A + RAA GH K+ L
Sbjct: 647 ISLFERAIELGNIESMYALGLIYRNGK--VQDYKKAAELFTRAAQKGHQKSTL 697
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 20/185 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGD 168
G G+ ++ KA + K A G A + +MY E DK++AA +LY++AA LG
Sbjct: 24 GDGIEQDKQKAAALYQKAADLGHLGATCNLAVMYHNGDGIEQDKQKAA-ALYQKAADLGH 82
Query: 169 PAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
NL + Y +++A L +++ GH+ A LA+ + G G++ + Q+A
Sbjct: 83 LGATCNLAVMYHNGDGIEQDKQKAAALYQKSADLGHLGATCNLAVMYNNGDGIEQDKQKA 142
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA------QLE 274
A Y +AA+ G++ A N ++ Y+ G+G+ ++A ++AA+ H A +
Sbjct: 143 AALYQKAADLGHLGATCNLAVMYNNGDGIEQDKQKAAALYQKAANLDHPGATCNLAVMYD 202
Query: 275 HGLGL 279
HG G+
Sbjct: 203 HGDGI 207
Score = 64.7 bits (156), Expect = 6e-08, Method: Composition-based stats.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G G+ ++ KA + K A G A + +MY E DK++AA +LY++AA
Sbjct: 93 YHNGDGIEQDKQKAAALYQKSADLGHLGATCNLAVMYNNGDGIEQDKQKAA-ALYQKAAD 151
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG NL + Y +++A L +A+ H A LA+ G G++ +
Sbjct: 152 LGHLGATCNLAVMYNNGDGIEQDKQKAAALYQKAANLDHPGATCNLAVMYDHGDGIEQDK 211
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA------ 271
Q+AA Y +AA + A N ++ Y G+G+ ++A ++AAD H A
Sbjct: 212 QKAAALYQKAANLDHPGATCNLAIMYDIGDGIEQDKQKAAALYQKAADLDHPGATCNLAV 271
Query: 272 QLEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
+HG G+ E + KA + A G A
Sbjct: 272 MYDHGEGI--EQDKQKAAALYQKAVNLGHLGA 301
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+ HG G+ ++ KA + K G A + +MY E DK++AA +LY++AA
Sbjct: 273 YDHGEGIEQDKQKAAALYQKAVNLGHLGATCNLAVMYHHGDGIEQDKQKAA-ALYQKAAN 331
Query: 166 LGDPAGQFNLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCLHRGRGVDFNL 217
L P NL + Y E ++ LYQ A+ H A LA+ G G++ +
Sbjct: 332 LDHPGATCNLAVMYDHGEGIEQDKQKAAALYQKAADLDHPGATCNLAIMYDIGDGIEQDK 391
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
Q+AA Y +AA+ + A N ++ Y G+G+ ++A ++AAD H A
Sbjct: 392 QKAAALYQKAADLDHPGATCNLAIMYDNGDGIEQDKQKAAALYQKAADLDHPGA 445
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G G+ ++ KA + K A A + +MY E DK++AA +LY++A LG
Sbjct: 240 GDGIEQDKQKAAALYQKAADLDHPGATCNLAVMYDHGEGIEQDKQKAA-ALYQKAVNLGH 298
Query: 169 PAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
NL + Y +++A L +A+ H A LA+ G G++ + Q+A
Sbjct: 299 LGATCNLAVMYHHGDGIEQDKQKAAALYQKAANLDHPGATCNLAVMYDHGEGIEQDKQKA 358
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
A Y +AA+ + A N ++ Y G+G+ ++A ++AAD H A
Sbjct: 359 AALYQKAADLDHPGATCNLAIMYDIGDGIEQDKQKAAALYQKAADLDHPGA 409
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 173 FNL----GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
FNL GI +++A L +A+ GH+ A LA+ H G G++ + Q+AA Y +AA
Sbjct: 19 FNLYTGDGIEQDKQKAAALYQKAADLGHLGATCNLAVMYHNGDGIEQDKQKAAALYQKAA 78
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ G++ A N ++ Y G+G+ ++A +++AD GH
Sbjct: 79 DLGHLGATCNLAVMYHNGDGIEQDKQKAAALYQKSADLGH 118
Score = 44.7 bits (104), Expect = 0.062, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y A L+ G G++ + Q+AA Y +AA+ G++ A N ++ Y G+G+ ++A
Sbjct: 15 YDYAFNLYTGDGIEQDKQKAAALYQKAADLGHLGATCNLAVMYHNGDGIEQDKQKAAALY 74
Query: 261 KRAADCGH 268
++AAD GH
Sbjct: 75 QKAADLGH 82
>gi|302878679|ref|YP_003847243.1| Sel1 domain-containing protein repeat-containing protein
[Gallionella capsiferriformans ES-2]
gi|302581468|gb|ADL55479.1| Sel1 domain protein repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 406
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQAAVLGDPAGQFNLGISY 179
AL F A +GS A G+MY + ++K + AI YRQAA G+ QFNLG+ +
Sbjct: 36 ALQEFKPLAEQGSADAQNALGVMYEKGFGVEKNDGQAIRWYRQAAEQGNENAQFNLGVLF 95
Query: 180 LQ----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
EAV+ +A+ G+ Q +L G+GV + +A +W+ +AAE G A
Sbjct: 96 DNRQDYTEAVRWYRKAAEQGNKSGQARLGSLYVLGQGVAADKVQAIQWFRKAAEQGQAGA 155
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 291
Y YS G GL QA W ++A + GH AQ G+ GL ++ KA+
Sbjct: 156 QYFLGFAYSGGYGLSKDEVQAVYWYRKAVEQGHADAQFNLGVMYASGLGVTKDLEKAMQL 215
Query: 292 LELATRAGETAADH 305
L+ + G A +
Sbjct: 216 YALSAKQGNEPAKN 229
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 86 LVCKSWNDALRPLREAMVLLRWGK---------RFKHGRGVRKNLDKALDSFLKGAARGS 136
L + ND L L+E L G ++ G GV KN +A+ + + A +G+
Sbjct: 25 LTAYNKNDYLSALQEFKPLAEQGSADAQNALGVMYEKGFGVEKNDGQAIRWYRQAAEQGN 84
Query: 137 TLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLL 188
A + G+++ A+ YR+AA G+ +GQ LG Y+ + +A++
Sbjct: 85 ENAQFNLGVLFDNRQDYTEAVRWYRKAAEQGNKSGQARLGSLYVLGQGVAADKVQAIQWF 144
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
+A+ G AQY L G G+ + +A WY +A E G+ A +N + Y+ G G
Sbjct: 145 RKAAEQGQAGAQYFLGFAYSGGYGLSKDEVQAVYWYRKAVEQGHADAQFNLGVMYASGLG 204
Query: 249 LPLSHRQARKWMKRAADCGHGKAQ 272
+ +A + +A G+ A+
Sbjct: 205 VTKDLEKAMQLYALSAKQGNEPAK 228
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 131 GAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY-----LQEEAV 185
G AR +L ++ G+ DK +A I +R+AA G Q+ LG +Y L ++ V
Sbjct: 119 GQARLGSLYVLGQGVA---ADKVQA-IQWFRKAAEQGQAGAQYFLGFAYSGGYGLSKDEV 174
Query: 186 KLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+ +Y +A GH AQ+ L + G GV +L++A + Y +A+ G A N +
Sbjct: 175 QAVYWYRKAVEQGHADAQFNLGVMYASGLGVTKDLEKAMQLYALSAKQGNEPAKNNLA-- 232
Query: 243 YSFGEGLPLSHRQARKWMKRAADC 266
+ L SH+ + A +C
Sbjct: 233 -DLQKKLLCSHKASTLLFGEALNC 255
>gi|419913974|ref|ZP_14432382.1| TPR repeat-containing protein, partial [Escherichia coli KD1]
gi|388387826|gb|EIL49431.1| TPR repeat-containing protein, partial [Escherichia coli KD1]
Length = 585
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 267 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 326
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P Q +L G+ E+A K +++ G+ AQY LA GRGVD
Sbjct: 327 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 386
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 387 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 446
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 447 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 490
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQAAVLGDPAGQFNLGIS 178
K L S+ + A +G+++ D G MY+ E+ KK+ + Y ++A G+ NL +
Sbjct: 246 KKLTSYKRAAQQGNSVFQNDLGAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALM 305
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR-GRGVDFNLQEAARWYLRAAE 229
Y ++A+ L A+ H AQ+ LA C++R G GV+ + ++A +W ++AE
Sbjct: 306 YRDGKGVNKNPQKAISLYLNAANKNHPLAQHSLA-CMYRDGEGVEVDDEQAFKWCQKSAE 364
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GY A Y+ + Y G G+ + ++Q W+ +AD + KA+ G + E+ + +
Sbjct: 365 QGYAEAQYHLATMYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDM 424
Query: 290 VYLELATRAGETAADH 305
+A ++AADH
Sbjct: 425 T---MAINLLKSAADH 437
>gi|268592892|ref|ZP_06127113.1| TPR repeat protein, protein-protein interaction [Providencia
rettgeri DSM 1131]
gi|291311682|gb|EFE52135.1| TPR repeat protein, protein-protein interaction [Providencia
rettgeri DSM 1131]
Length = 267
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 14/189 (7%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLAL 205
+AA + +A G+ QF LG ++ V+ Y QA+ G RA+ +A+
Sbjct: 71 KAAAEWFIKAGNQGNSDAQFRLGTMFVNGFGVRRDYDKAMLWYEQAAAQGDTRAETNMAM 130
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+G GV NL++AA W+ +AA+GG + A + YS G G+ L +A W ++AA
Sbjct: 131 MYAQGLGVSQNLEKAAFWFRKAAQGGNILAQFQIGQMYSIGSGVDLDDEKAVFWFRKAAK 190
Query: 266 CGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
K+Q G+ +++EG + +A +L A +G + ++N I QLS
Sbjct: 191 QKDAKSQDRLGV-MYSEGRGVKKNLQQAYAWLATAVYSGNAESHRLQNKIAAQLSPEELQ 249
Query: 321 RAMLVVDSW 329
+A + + +
Sbjct: 250 QAQKLAEGY 258
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 24/167 (14%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G F +G GVR++ DKA+ + + AA+G T A + +MY +
Sbjct: 90 FRLGTMFVNGFGVRRDYDKAMLWYEQAAAQGDTRAETNMAMMYAQ--------------- 134
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
LG+S E+A +A+ G++ AQ+Q+ G GVD + ++A W+
Sbjct: 135 ---------GLGVSQNLEKAAFWFRKAAQGGNILAQFQIGQMYSIGSGVDLDDEKAVFWF 185
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+AA+ ++ + YS G G+ + +QA W+ A G+ ++
Sbjct: 186 RKAAKQKDAKSQDRLGVMYSEGRGVKKNLQQAYAWLATAVYSGNAES 232
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
QE +++ + Q + G +AQ+QL +G GV + + AA W+++A G A +
Sbjct: 34 QEPSIEQITQLAQKGDPKAQFQLGERYFKGLGVSQDSKAAAEWFIKAGNQGNSDAQFRLG 93
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELAT 296
+ G G+ + +A W ++AA G +A+ + + GL + KA + A
Sbjct: 94 TMFVNGFGVRRDYDKAMLWYEQAAAQGDTRAETNMAMMYAQGLGVSQNLEKAAFWFRKAA 153
Query: 297 RAGETAA 303
+ G A
Sbjct: 154 QGGNILA 160
>gi|50085803|ref|YP_047313.1| signal peptide [Acinetobacter sp. ADP1]
gi|49531779|emb|CAG69491.1| conserved hypothetical protein; putative signal peptide
[Acinetobacter sp. ADP1]
Length = 240
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPA 170
+GV K+ +AL GS A GLMY + A + +AA G
Sbjct: 64 QGVTKDTTQALKWLTLADQNGSVGAKYSLGLMYMTGTGVSQNQSTAFEWFSKAAKFGHAQ 123
Query: 171 GQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q+ +G Y + +A + + +A++ G+ A++ L L + GRGV N Q+A +
Sbjct: 124 AQYTVGRMYSEGVGVEKNMPQAFEWIQKAALQGYPPAEFSLGLMYNDGRGVAQNKQQAIK 183
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
WY +AAE A YN + Y GEG + A+KW++RAA+ G
Sbjct: 184 WYTQAAEHQQSNAQYNLGIMYLNGEGTSKNPPLAKKWLQRAANAG 228
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAVLGDPAGQFNLG 176
+ L + AA+G + A G+MY ++ A+ A G +++LG
Sbjct: 34 EPTLSDIKQMAAQGKSTAQYHLGMMYLSGEQGVTKDTTQALKWLTLADQNGSVGAKYSLG 93
Query: 177 ISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+ Y+ Q A + +A+ GH +AQY + G GV+ N+ +A W +AA
Sbjct: 94 LMYMTGTGVSQNQSTAFEWFSKAAKFGHAQAQYTVGRMYSEGVGVEKNMPQAFEWIQKAA 153
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK- 287
GY A ++ L Y+ G G+ + +QA KW +AA+ AQ G+ ++ GE
Sbjct: 154 LQGYPPAEFSLGLMYNDGRGVAQNKQQAIKWYTQAAEHQQSNAQYNLGI-MYLNGEGTSK 212
Query: 288 ----AVVYLELATRAGETAADHV 306
A +L+ A AG+ A V
Sbjct: 213 NPPLAKKWLQRAANAGDQDAKDV 235
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G+ + G GV KN+ +A + K A +G A GLMY + K+ AI Y QA
Sbjct: 129 GRMYSEGVGVEKNMPQAFEWIQKAALQGYPPAEFSLGLMYNDGRGVAQNKQQAIKWYTQA 188
Query: 164 AVLGDPAGQFNLGISYLQEEAV 185
A Q+NLGI YL E
Sbjct: 189 AEHQQSNAQYNLGIMYLNGEGT 210
>gi|195112224|ref|XP_002000674.1| GI22400 [Drosophila mojavensis]
gi|193917268|gb|EDW16135.1| GI22400 [Drosophila mojavensis]
Length = 816
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ ++++ KAL+ F A G+ + G +Y E ++ E A + +A+
Sbjct: 339 YQGGKAIQQDHQKALEYFTLAANAGNAIGFAFLGKLYLEGSEQIKADNETAFKYFSKASE 398
Query: 166 LGDPAGQFNLGISYLQ-----EEAVKLL---YQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+GDP GQ LG+ YL+ ++++K L QA+ G V Q QL G GV +
Sbjct: 399 MGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGTMYFTGNGVKTDY 458
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A +++ A + G+V A YN + +++G G+ S A ++ K A+ G ++L H
Sbjct: 459 KLALKYFNLATQSGHVLAYYNLGIMHAYGMGMLRSCPAAVEFFKNVAERGRWSSRLMHAY 518
Query: 278 GLFTEGEMMKAVVYLELATRAGETAA 303
+ + + +A + L G A
Sbjct: 519 SDYKQNRVDEAYMQYSLMAEVGYEVA 544
>gi|319776413|ref|YP_004138901.1| hypothetical protein HICON_16160 [Haemophilus influenzae F3047]
gi|317451004|emb|CBY87234.1| TPR repeat, SEL1 subfamily [Haemophilus influenzae F3047]
Length = 255
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 97 PLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
PL E A V G + G+GV+++ +A+ F K A +G A G MY +
Sbjct: 54 PLAEQSDANVQFNLGVIYAKGQGVKQDDFEAVKWFRKAAEQGHAEAQFSLGNMYSDGIGV 113
Query: 150 -MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQ 200
D EA + YR+AA G Q NLG+ Y VK Y +A G+ AQ
Sbjct: 114 KQDDFEA-VKWYRKAADQGYAGAQMNLGVMYANGRGVKQDYFKAVKWYRKAVEQGYANAQ 172
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
L GRGV + EA +W+ +AAE G + L Y G+G+ A++W
Sbjct: 173 ANLGSAYSAGRGVRQDYTEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTFAKEWF 232
Query: 261 KRAADCGH 268
+A D G+
Sbjct: 233 GKACDNGN 240
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCL 207
A+ +R+AA G QF+LG Y EAVK +A+ G+ AQ L +
Sbjct: 84 AVKWFRKAAEQGHAEAQFSLGNMYSDGIGVKQDDFEAVKWYRKAADQGYAGAQMNLGVMY 143
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + +A +WY +A E GY A N YS G G+ + +A KW K+AA+ G
Sbjct: 144 ANGRGVKQDYFKAVKWYRKAVEQGYANAQANLGSAYSAGRGVRQDYTEAVKWFKKAAENG 203
Query: 268 HGKAQLEHGL 277
Q + GL
Sbjct: 204 SADGQFKLGL 213
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAG 195
GL +E + A L+ A D QFNLG+ Y + EAVK +A+ G
Sbjct: 36 GLTAYEQSDYQTAFKLWLPLAEQSDANVQFNLGVIYAKGQGVKQDDFEAVKWFRKAAEQG 95
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
H AQ+ L G GV + EA +WY +AA+ GY A N + Y+ G G+ + +
Sbjct: 96 HAEAQFSLGNMYSDGIGVKQDDFEAVKWYRKAADQGYAGAQMNLGVMYANGRGVKQDYFK 155
Query: 256 ARKWMKRAADCGHGKAQLEHG 276
A KW ++A + G+ AQ G
Sbjct: 156 AVKWYRKAVEQGYANAQANLG 176
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 172 QFNLGIS-YLQEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
QF G++ Y Q + A KL + Q+ L + +G+GV + EA +W+ +A
Sbjct: 32 QFQQGLTAYEQSDYQTAFKLWLPLAEQSDANVQFNLGVIYAKGQGVKQDDFEAVKWFRKA 91
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG---- 283
AE G+ A ++ YS G G+ +A KW ++AAD G+ AQ+ G+ ++ G
Sbjct: 92 AEQGHAEAQFSLGNMYSDGIGVKQDDFEAVKWYRKAADQGYAGAQMNLGV-MYANGRGVK 150
Query: 284 -EMMKAVVYLELATRAG 299
+ KAV + A G
Sbjct: 151 QDYFKAVKWYRKAVEQG 167
>gi|195392343|ref|XP_002054817.1| GJ24649 [Drosophila virilis]
gi|194152903|gb|EDW68337.1| GJ24649 [Drosophila virilis]
Length = 810
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ ++++ KAL+ F A G+ + G +Y E ++ E A + +A+
Sbjct: 340 YQGGKAIQQDHQKALEYFTLAANAGNAIGFAFLGKLYLEGSEQIKADNETAFKYFSKASE 399
Query: 166 LGDPAGQFNLGISYLQ-----EEAVKLL---YQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+GDP GQ LG+ YL+ ++++K L QA+ G V Q QL G GV +
Sbjct: 400 MGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGTMYFTGNGVKTDY 459
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A +++ A + G+V A YN + +++G G+ S A ++ K A+ G ++L H
Sbjct: 460 KLALKYFNLATQSGHVLAYYNLGIMHAYGMGMLRSCPAAVEFFKNVAERGRWSSRLMHAY 519
Query: 278 GLFTEGEMMKAVVYLELATRAGETAA 303
+ + + +A + L G A
Sbjct: 520 SDYKQNRIDEAYMQYSLMAEVGYEVA 545
>gi|449704723|gb|EMD44910.1| protein kinase, putative [Entamoeba histolytica KU27]
Length = 1038
Score = 74.7 bits (182), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 24/166 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+K+G GV+ + + + L+ A GS++AM + G Y+ LG+
Sbjct: 726 YKYGTGVKMSNELYVQWTLQAANNGSSIAMFNVGCWYY-----------------LGE-- 766
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
N ++ ++EAVK Y+++ G +A L C G GV+ N ++A +W+ R+A+
Sbjct: 767 ---NFKVN--KKEAVKWYYKSAKEGCGKAMCNLGRCYFDGEGVECNKKKAFKWFKRSAKK 821
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
G V +N S CY +G+G + +A W K A+ GH +A + +G
Sbjct: 822 GIVSGQFNCSNCYYYGDGTQRNIDKAMYWSKLASINGHARAFIIYG 867
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G K ++KAL F + +GS +A + G++ + ++ E + R
Sbjct: 612 GVFYSLGYGTSKQINKALQLFNIASGQGSGIAENNKGMILFSGNEYENEV---RDCV--- 665
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
EAV+ ++S G + ++C G GV+ + +A + ++
Sbjct: 666 ---------------EAVQCFIRSSEKGCKEGMFNASVCYFNGDGVEKDDYKAIEYLKKS 710
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
AE GY A + CY +G G+ +S+ +W +AA+ G A G
Sbjct: 711 AELGYAEAECLLASCYKYGTGVKMSNELYVQWTLQAANNGSSIAMFNVG 759
>gi|67481567|ref|XP_656133.1| protein kinase [Entamoeba histolytica HM-1:IMSS]
gi|56473313|gb|EAL50747.1| protein kinase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 1038
Score = 74.7 bits (182), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 24/166 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+K+G GV+ + + + L+ A GS++AM + G Y+ LG+
Sbjct: 726 YKYGTGVKMSNELYVQWTLQAANNGSSIAMFNVGCWYY-----------------LGE-- 766
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
N ++ ++EAVK Y+++ G +A L C G GV+ N ++A +W+ R+A+
Sbjct: 767 ---NFKVN--KKEAVKWYYKSAKEGCGKAMCNLGRCYFDGEGVECNKKKAFKWFKRSAKK 821
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
G V +N S CY +G+G + +A W K A+ GH +A + +G
Sbjct: 822 GIVSGQFNCSNCYYYGDGTQRNIDKAMYWSKLASINGHARAFIIYG 867
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G K ++KAL F + +GS +A + G++ + ++ E + R
Sbjct: 612 GVFYSLGYGTSKQINKALQLFNIASGQGSGIAENNKGMILFSGNEYENEV---RDCV--- 665
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
EAV+ ++S G + ++C G GV+ + +A + ++
Sbjct: 666 ---------------EAVQCFIRSSEKGCKEGMFNASVCYFNGDGVEKDDYKAIEYLKKS 710
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
AE GY A + CY +G G+ +S+ +W +AA+ G A G
Sbjct: 711 AELGYAEAECLLASCYKYGTGVKMSNELYVQWTLQAANNGSSIAMFNVG 759
>gi|270156775|ref|ZP_06185432.1| TPR repeat family protein [Legionella longbeachae D-4968]
gi|289164776|ref|YP_003454914.1| Sel1 repeat protein [Legionella longbeachae NSW150]
gi|269988800|gb|EEZ95054.1| TPR repeat family protein [Legionella longbeachae D-4968]
gi|288857949|emb|CBJ11809.1| putative Sel1 repeat protein [Legionella longbeachae NSW150]
Length = 376
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EAM LL G+ F++G+GV KN ++AL + K A + LA + G MY
Sbjct: 49 EAMYLL--GRMFQYGQGVSKNHEEALKWYQKSAEKNYPLAQLSLGFMY------------ 94
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
LG+ G+ EA K +++ G+ AQ +AL G GV N +
Sbjct: 95 -----DLGE-------GVKQNFPEAFKWYMKSAQQGNAIAQRNIALMYSTGDGVQANKKM 142
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A W+ ++A+ GY +A N + Y GEG +A W ++AA+ G KA E+ LGL
Sbjct: 143 AFDWFEKSAKQGYSKAQVNLAYDYIMGEGTKKDVNKAFYWYQKAAEQGDAKA--EYSLGL 200
Query: 280 FTEGE 284
G+
Sbjct: 201 LYTGQ 205
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 17/223 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEA--AISLYRQAAVL 166
+ G GV+ N A D F K A +G + A V+ Y E KK+ A Y++AA
Sbjct: 130 YSTGDGVQANKKMAFDWFEKSAKQGYSKAQVNLAYDYIMGEGTKKDVNKAFYWYQKAAEQ 189
Query: 167 GDPAGQFNLGISYLQEE---------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD +++LG+ Y ++ A QA+ GH RAQ LA +G GV+ +
Sbjct: 190 GDAKAEYSLGLLYTGQQPGVGQDDQAAFYWFSQAANQGHPRAQTYLAYYYLKGYGVEADP 249
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Q+AA WY AA+ G A G G+ + Q+ W +AA G+ Q + G
Sbjct: 250 QKAAYWYQVAAQNGQSEAQVEIGQLLLTGTGVDKDYAQSFYWFTKAAAQGNTLGQAKLGY 309
Query: 278 ----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSA 316
GL + + +KA ++A + A ++ ++LSA
Sbjct: 310 MYLAGLGVDKDWIKAYALFKIAAKNKNQEAAKELKILQKKLSA 352
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q+ G+S EEA+K +++ + AQ L G GV N EA +WY+++A+ G
Sbjct: 59 QYGQGVSKNHEEALKWYQKSAEKNYPLAQLSLGFMYDLGEGVKQNFPEAFKWYMKSAQQG 118
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----EHGLGLFTEGEMMK 287
A N +L YS G+G+ + + A W +++A G+ KAQ+ ++ +G T+ ++ K
Sbjct: 119 NAIAQRNIALMYSTGDGVQANKKMAFDWFEKSAKQGYSKAQVNLAYDYIMGEGTKKDVNK 178
Query: 288 AVVYLELATRAGETAADH 305
A + + A G+ A++
Sbjct: 179 AFYWYQKAAEQGDAKAEY 196
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A L QA+ G++ A Y L G+GV N +EA +WY ++AE Y A + Y
Sbjct: 35 AYPYLMQAARDGNIEAMYLLGRMFQYGQGVSKNHEEALKWYQKSAEKNYPLAQLSLGFMY 94
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 288
GEG+ + +A KW ++A G+ AQ L +++ G+ ++A
Sbjct: 95 DLGEGVKQNFPEAFKWYMKSAQQGNAIAQRNIAL-MYSTGDGVQA 138
>gi|153867676|ref|ZP_01997972.1| conserved hypothetical protein [Beggiatoa sp. SS]
gi|152145004|gb|EDN72028.1| conserved hypothetical protein [Beggiatoa sp. SS]
Length = 269
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 116/234 (49%), Gaps = 23/234 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLY 160
G ++ G+GV +L +A+ K A +G A + G++Y +M + E +
Sbjct: 38 GVMYRDGKGVHPDLAEAVKWIQKAADQGLAKAQFNLGMLYLYGQGVSHDMTQVEHWLG-- 95
Query: 161 RQAAVLGDPAGQFNLGISYLQE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA G Q++L + Y + K +++ + G V AQ LAL ++G GV
Sbjct: 96 -KAASQGLVQAQYHLWLLYRDARGTKDFVQLAKWVHKTAENGDVGAQSFLALMYYQGEGV 154
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +AA WY +AAE G + + YN + Y G+G+ + +QA W ++AAD G +AQ
Sbjct: 155 KQDFTQAAHWYQKAAEQGDMYSQYNIAQMYHQGKGVKKTPKQAANWYRKAADQGLVEAQY 214
Query: 274 EHGLGLFTEGE-MMKAVVYLE----LATRAGETAADHVKNVILQQLSATSRDRA 322
+ G G++ +GE + K V+++ A + G +A IL QL DR+
Sbjct: 215 QLG-GMYAKGEGVSKDVLFINALFVTAAKQGHESAIVELIHILTQLPLVQIDRS 267
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
AV +A+ H AQ QL + G+GV +L EA +W +AA+ G +A +N + Y
Sbjct: 18 AVSWYRKAADQNHAPAQNQLGVMYRDGKGVHPDLAEAVKWIQKAADQGLAKAQFNLGMLY 77
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+G+G+ Q W+ +AA G +AQ
Sbjct: 78 LYGQGVSHDMTQVEHWLGKAASQGLVQAQ 106
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+S YR+AA Q LG+ Y EAVK + +A+ G +AQ+ L +
Sbjct: 18 AVSWYRKAADQNHAPAQNQLGVMYRDGKGVHPDLAEAVKWIQKAADQGLAKAQFNLGMLY 77
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV ++ + W +AA G V+A Y+ L Y G Q KW+ + A+ G
Sbjct: 78 LYGQGVSHDMTQVEHWLGKAASQGLVQAQYHLWLLYRDARGTK-DFVQLAKWVHKTAENG 136
Query: 268 HGKAQLEHGLGLFTEGEMMK 287
AQ L ++ +GE +K
Sbjct: 137 DVGAQSFLAL-MYYQGEGVK 155
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
+GV N A WY +AA+ + A + Y G+G+ +A KW+++AAD G K
Sbjct: 9 QGVYQNHITAVSWYRKAADQNHAPAQNQLGVMYRDGKGVHPDLAEAVKWIQKAADQGLAK 68
Query: 271 AQLEHG-LGLFTEG 283
AQ G L L+ +G
Sbjct: 69 AQFNLGMLYLYGQG 82
>gi|444708848|gb|ELW49887.1| Protein sel-1 like protein 1 [Tupaia chinensis]
Length = 826
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGI 177
+A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG+
Sbjct: 353 RAFDYFNLAANAGNSHAMAFLGKMYSEGSDTVPQSNETALHYFKKAADMGNPVGQSGLGM 412
Query: 178 SYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
+YL V++ Y +A+ G V Q QL + G GV + ++A +++ A++
Sbjct: 413 AYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQ 472
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GG++ A YN + ++ G G+ S A + K + G +L + +G+ AV
Sbjct: 473 GGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYHSYKDGDYNAAV 532
Query: 290 V-YLELATRAGETAADHVKNVILQQLSAT 317
+ YL LA + E A + IL Q AT
Sbjct: 533 IQYLLLAEQGYEVAQSNAA-FILDQREAT 560
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 29/159 (18%)
Query: 74 ASFTLPQLRAASL-VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGA 132
S T+PQ +L K D P+ ++ + G + +GRGV+ N D AL F K A
Sbjct: 380 GSDTVPQSNETALHYFKKAADMGNPVGQSGL----GMAYLYGRGVQVNYDLALKYFQKAA 435
Query: 133 ARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQAS 192
+G + G MY+ +G+ ++A+K AS
Sbjct: 436 EQGWVDGQLQLGSMYYN------------------------GIGVKRDYKQALKYFNLAS 471
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
GH+ A Y LA G GV + A + E G
Sbjct: 472 QGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 510
>gi|452966969|gb|EME71976.1| TPR repeat-containing SEL1 subfamily protein [Magnetospirillum sp.
SO-1]
Length = 390
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 48/223 (21%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A ++ G ++ G+GV +L +A+ + + A G G+MY +
Sbjct: 154 DAAAMVALGNAYREGKGVAPDLGEAVKLYTQAAKAGDARGQYSLGVMYDQGLGVAQSNAH 213
Query: 156 AISLYRQAAVLGDPAGQFNLG--------------------------------------- 176
A+ +R+AA GDP QFNLG
Sbjct: 214 ALKWFREAAKQGDPQAQFNLGNMIRQGRGVEASPEVAAKWFKQAADQGDAGAIFALGALY 273
Query: 177 -----ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
+ + +AV+L QA+ G A + LA L +GRG D + EAA RAAE G
Sbjct: 274 EAGAGVERDETQAVELYRQAADQGLATALHNLANMLRQGRGTDPDPTEAAMLCRRAAEQG 333
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
A YN ++ + G G+ A +W +RAAD G + +++
Sbjct: 334 LAEAQYNYAVMLALGVGVEQDEAAAIRWFRRAADSGDARGEVQ 376
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 167 GDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD A LG +Y + EAVKL QA+ AG R QY L + +G GV +
Sbjct: 153 GDAAAMVALGNAYREGKGVAPDLGEAVKLYTQAAKAGDARGQYSLGVMYDQGLGVAQSNA 212
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-- 276
A +W+ AA+ G +A +N G G+ S A KW K+AAD G A G
Sbjct: 213 HALKWFREAAKQGDPQAQFNLGNMIRQGRGVEASPEVAAKWFKQAADQGDAGAIFALGAL 272
Query: 277 --LGLFTEGEMMKAV-VYLELATRAGETAADHVKNVILQ 312
G E + +AV +Y + A + TA ++ N++ Q
Sbjct: 273 YEAGAGVERDETQAVELYRQAADQGLATALHNLANMLRQ 311
>gi|145637541|ref|ZP_01793198.1| hypothetical protein CGSHiHH_04235 [Haemophilus influenzae PittHH]
gi|145269227|gb|EDK09173.1| hypothetical protein CGSHiHH_04235 [Haemophilus influenzae PittHH]
Length = 254
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 17/190 (8%)
Query: 95 LRPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---- 147
L+PL E A+ G ++ G GV+++ +A+ + + A +G A + G+MY
Sbjct: 51 LQPLAEQGDAIAQFLLGGVYEDGIGVKQDDFEAVKWYRQAAEQGYARAQYNLGVMYDDGR 110
Query: 148 -WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVR 198
+ D EA + YRQAA G+ Q+NLG Y EAVK +A+ G
Sbjct: 111 GIKQDDFEA-VKWYRQAAEQGNAEAQYNLGNMYANGRGVKQDNFEAVKWFRKAAEQGDAE 169
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ L GRGV + EA +W+ +AA+ G+ +A L Y G+G+ ++ A++
Sbjct: 170 AQLILGAMYGDGRGVKQDDFEAVKWFRKAADQGHAKAQVLLGLSYILGKGVQVNKVLAKE 229
Query: 259 WMKRAADCGH 268
W +A D G
Sbjct: 230 WFGKACDNGE 239
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 9/142 (6%)
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLG------ISYLQE--EAVKLLYQA 191
M+ +Y + D K A + + + A GD QF LG I Q+ EAVK QA
Sbjct: 32 MIQVEQLYKQKDFK-AMLVILQPLAEQGDAIAQFLLGGVYEDGIGVKQDDFEAVKWYRQA 90
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
+ G+ RAQY L + GRG+ + EA +WY +AAE G A YN Y+ G G+
Sbjct: 91 AEQGYARAQYNLGVMYDDGRGIKQDDFEAVKWYRQAAEQGNAEAQYNLGNMYANGRGVKQ 150
Query: 252 SHRQARKWMKRAADCGHGKAQL 273
+ +A KW ++AA+ G +AQL
Sbjct: 151 DNFEAVKWFRKAAEQGDAEAQL 172
>gi|384411700|ref|YP_005621065.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932074|gb|AEH62614.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 632
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ G+ + +N +A F K A +G A ++ G +Y++ D +AA +L+++ A
Sbjct: 386 KYYEGKEISQNFKQAAYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAA-TLFQKTA 444
Query: 165 VLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
P Q LGI Y + E V L QA+ G AQ+ L G+ V N
Sbjct: 445 DQNYPKAQLFLGILYERGEGVPQDTQKALSLYKQAANLGEAEAQFILGYHYGTGKIVPLN 504
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
L++AA WY +AA G +R N + Y G G+P + A W+++AA KA++ G
Sbjct: 505 LKKAASWYNKAAHAGSLRGQINLGIAYMLGAGVPKNILVAIYWLQQAAKSDDIKAEINLG 564
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 132 AARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ----- 181
A +G A D L Y+E + K+AA +++AA GDP+ NLG Y
Sbjct: 372 AEKGDKEAQYDFALKYYEGKEISQNFKQAAY-WFQKAADQGDPSATLNLGALYYDGKLGK 430
Query: 182 ---EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+A L + + + +AQ L + RG GV + Q+A Y +AA G A +
Sbjct: 431 TDFSKAATLFQKTADQNYPKAQLFLGILYERGEGVPQDTQKALSLYKQAANLGEAEAQFI 490
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLEL 294
Y G+ +PL+ ++A W +AA G + Q+ G LG ++ A+ +L+
Sbjct: 491 LGYHYGTGKIVPLNLKKAASWYNKAAHAGSLRGQINLGIAYMLGAGVPKNILVAIYWLQQ 550
Query: 295 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
A ++ + A+ + L ++ A +++ + +D+
Sbjct: 551 AAKSDDIKAE----INLGKIYADPKNQEIFALDT 580
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEAAISLYRQAA 164
G + +G V++N + + A G A + Y E D KE A + AA
Sbjct: 276 GAIYYNGEDVKQNKELGRYWIEQAAKWGDPEAQRITSMFYQESDTLEDKEKAEFWLKTAA 335
Query: 165 VLGDPAGQFNLGISY---------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
+ GD Q + I Y + + +KLL + + G AQY AL + G+ +
Sbjct: 336 LAGDKEAQKQVSILYTNKDPKISEIHPQIIKLLREKAEKGDKEAQYDFALKYYEGKEISQ 395
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N ++AA W+ +AA+ G A N Y G+ +A ++ AD + KAQL
Sbjct: 396 NFKQAAYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAATLFQKTADQNYPKAQLFL 455
Query: 276 GLGLFTEGE-----MMKAVVYLELATRAGETAADHV 306
G+ L+ GE KA+ + A GE A +
Sbjct: 456 GI-LYERGEGVPQDTQKALSLYKQAANLGEAEAQFI 490
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVL 166
+ +G GV KN++K + + K G + G++YW D +E A+ +A
Sbjct: 135 YINGEGVPKNVEKGISWYKKAILSGDIDSARRLGMLYWMGDDVPRDQEKALHWLENSANN 194
Query: 167 GD-PAGQ-----FNLG--ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD A Q + LG I + +E+ + L +++ G V +Q LA + G+ + + +
Sbjct: 195 GDWDASQMLSRFYILGENIPFDKEKGLYWLEKSAKQGGVISQEILANLYYSGQMLPLDKK 254
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+AA WY +AA+ A Y GE + + R W+++AA G +AQ +
Sbjct: 255 KAAYWYEQAAKEHDGSAAKMLGAIYYNGEDVKQNKELGRYWIEQAAKWGDPEAQRITSM- 313
Query: 279 LFTEGEMM----KAVVYLELATRAGETAA 303
+ E + + KA +L+ A AG+ A
Sbjct: 314 FYQESDTLEDKEKAEFWLKTAALAGDKEA 342
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+ Y + V G P F+L + + QE A+ G A + L + G GV ++
Sbjct: 59 TFYSKGDVEGIPK-DFHLALHWYQE--------AAKDGDKEAAQMIGLLYYNGDGVPIDI 109
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+AA W+ +AA G A + Y GEG+P + + W K+A G
Sbjct: 110 AKAAYWFEKAANAGNWDAARRLATLYINGEGVPKNVEKGISWYKKAILSG 159
>gi|168820221|ref|ZP_02832221.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205343240|gb|EDZ30004.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
Length = 365
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
GK ++ G GV KN A + + A +G A + MYW+ + L Y ++
Sbjct: 143 GKMYEGGDGVEKNHQLAFYWYKQAALQGDATAQENLADMYWDGRGTTKNLRLATLWYLRS 202
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A+ + QF LG +Y + E VK YQ A+ G A + +G GV+
Sbjct: 203 ALQDEVHSQFQLGCAYSEGEGVKQDYQQAMHWYQQAAAQGDSNAYVNIGWMYKQGHGVER 262
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +EA W+ RAAE G V A YN Y G G + +QA W ++A G
Sbjct: 263 DDEEALSWFHRAAEAGNVTAWYNLGFMYRDGRGTAVDVKQALYWFQKAQPTG 314
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 88/215 (40%), Gaps = 22/215 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G R+ K+ KA K A +G LA D G W ++ + A+ Y
Sbjct: 71 GLRYSDTPTSMKDNAKASYWLEKAAKQGHKLAPNDLG---WVLEGETGSEPDYAQAVFWY 127
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRG 212
R G Q NLG Y + V+ +Q A++ G AQ LA GRG
Sbjct: 128 RVGTERGHSYAQNNLGKMYEGGDGVEKNHQLAFYWYKQAALQGDATAQENLADMYWDGRG 187
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
NL+ A WYLR+A V + + YS GEG+ ++QA W ++AA G A
Sbjct: 188 TTKNLRLATLWYLRSALQDEVHSQFQLGCAYSEGEGVKQDYQQAMHWYQQAAAQGDSNAY 247
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
+ G G E + +A+ + A AG A
Sbjct: 248 VNIGWMYKQGHGVERDDEEALSWFHRAAEAGNVTA 282
>gi|146343786|ref|YP_001208834.1| hypothetical protein BRADO7034 [Bradyrhizobium sp. ORS 278]
gi|146196592|emb|CAL80619.1| Conserved hypothetical protein; putative TPR repeats; putative
Beta-lactamase [Bradyrhizobium sp. ORS 278]
Length = 650
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 119/270 (44%), Gaps = 54/270 (20%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYR 161
R G+ +HGRG ++LD A D + K AA+G G +Y++ AAI YR
Sbjct: 160 RMGELCRHGRGCPRDLDAARDWYGKAAAQGHAGGAFGLGDIYFQGLGVSADPAAAIGWYR 219
Query: 162 QAAVLGDPAGQFNL--------GISYLQEEAVKLLYQAS--------------------I 193
QAA G Q L G++ + EAV+L +A+ +
Sbjct: 220 QAAEAGHARAQVALASCYQNGTGVAQDRAEAVRLYAEAARHDDVLALHCLGLAFLSGDGV 279
Query: 194 A----------------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
A GH+ A LA RG G + +L+EAA+WY AAE G V+A +
Sbjct: 280 AQSIDRAETALRKGARKGHLPAIQALAEFYARGLGGEPDLREAAQWYQAAAEKGDVQAQF 339
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYL 292
T Y+ G G+ S R+A KW RAA+ GH A + + +G ++ A+ +
Sbjct: 340 FTGRFYATGSGVAPSVREAAKWFLRAAEGGHATAAFNIAV-FYRDGTGIARDVPAAISWF 398
Query: 293 ELATRAGETAADHVKNVILQQLSATSRDRA 322
E A+ AG +AAD I + RD A
Sbjct: 399 EKASAAGISAADIQLGRIYAAGAGIERDPA 428
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G F G GV +++D+A + KGA +G A+ Y E D +EAA Y+
Sbjct: 270 GLAFLSGDGVAQSIDRAETALRKGARKGHLPAIQALAEFYARGLGGEPDLREAA-QWYQA 328
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
AA GD QF G Y G GV +++EAA+
Sbjct: 329 AAEKGDVQAQFFTGRFYAT----------------------------GSGVAPSVREAAK 360
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LG 278
W+LRAAEGG+ A +N ++ Y G G+ A W ++A+ G A ++ G G
Sbjct: 361 WFLRAAEGGHATAAFNIAVFYRDGTGIARDVPAAISWFEKASAAGISAADIQLGRIYAAG 420
Query: 279 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
E + +A +L A G+ A ++L Q
Sbjct: 421 AGIERDPARAAHWLAKAAEGGDAEARTALALVLLQ 455
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+A+ AGH + +QL + G GVD +L + WY AA G+ A YN ++ S G+G
Sbjct: 544 KAARAGHAPSAFQLGVMYCTGNGVDMDLAQGVAWYEAAAREGHPFAQYNLAVMLSKGQGC 603
Query: 250 PLSHRQARKWMK 261
+A +W++
Sbjct: 604 ERDQVKAVEWLR 615
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 54/133 (40%), Gaps = 10/133 (7%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------Q 190
A VDAG E + AI ++R+AA G F +G Y + E V + +
Sbjct: 19 ATVDAGAERHEAGEYLDAIRIWRRAATSGSAESAFRIGQMYAKGEGVVRSFPDAAAWYRR 78
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ AGH A+YQL L G W AA+ G A+ L + G +
Sbjct: 79 AAEAGHTEAKYQLGWMLLDGVAAPVGPNTPEAWQREAADNGETPAV--ARLLFPAGLAVE 136
Query: 251 LSHRQARKWMKRA 263
QA +W+ A
Sbjct: 137 RDPAQAVRWISAA 149
>gi|56550925|ref|YP_161764.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542499|gb|AAV88653.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 632
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ G+ + ++ +A+ F K A +G A ++ G +Y++ D +AA +L+++ A
Sbjct: 386 KYYEGKEISQDFKQAVYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAA-TLFQKTA 444
Query: 165 VLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
P Q LGI Y + E V L QA+ G AQ+ L G+ V N
Sbjct: 445 DQNYPKAQLFLGILYERGEGVPQDTQKALSLYKQAANLGEAEAQFILGYHYGTGKIVPLN 504
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
L++AA WY +AA G +R N + Y G G+P + A W+++AA KA++ G
Sbjct: 505 LKKAASWYTKAAHTGSLRGQINLGIAYMLGAGVPKNILVAIYWLQQAAKSDDIKAEINLG 564
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 132 AARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ----- 181
A +G A D L Y+E D K+A + +++AA GDP+ NLG Y
Sbjct: 372 AEKGDKEAQYDFALKYYEGKEISQDFKQA-VYWFQKAADQGDPSATLNLGALYYDGKLGK 430
Query: 182 ---EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+A L + + + +AQ L + RG GV + Q+A Y +AA G A +
Sbjct: 431 TDFSKAATLFQKTADQNYPKAQLFLGILYERGEGVPQDTQKALSLYKQAANLGEAEAQFI 490
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLEL 294
Y G+ +PL+ ++A W +AA G + Q+ G LG ++ A+ +L+
Sbjct: 491 LGYHYGTGKIVPLNLKKAASWYTKAAHTGSLRGQINLGIAYMLGAGVPKNILVAIYWLQQ 550
Query: 295 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
A ++ + A+ + L ++ A +++ + +D+
Sbjct: 551 AAKSDDIKAE----INLGKIYADPKNQEIFALDT 580
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEAAISLYRQAA 164
G + +G V++N + + A G A + Y E D KE A + AA
Sbjct: 276 GAIYYNGEDVKQNKELGRYWIEQAAKWGEPEAQRITSMFYQESDTLEDKEKAEFWLKTAA 335
Query: 165 VLGDPAGQFNLGISY---------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
+ GD Q + I Y + + +KLL + + G AQY AL + G+ +
Sbjct: 336 LAGDKEAQKQVSILYTNKDPKISEIHPQIIKLLREKAEKGDKEAQYDFALKYYEGKEISQ 395
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A W+ +AA+ G A N Y G+ +A ++ AD + KAQL
Sbjct: 396 DFKQAVYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAATLFQKTADQNYPKAQLFL 455
Query: 276 GLGLFTEGE-----MMKAVVYLELATRAGETAADHV 306
G+ L+ GE KA+ + A GE A +
Sbjct: 456 GI-LYERGEGVPQDTQKALSLYKQAANLGEAEAQFI 490
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVL 166
+ +G GV KN++K + + K G + G++YW D +E A+ +A
Sbjct: 135 YINGEGVPKNVEKGISWYKKAIQSGDIDSARRLGMLYWMGDDVPRDQEKALHWLENSANN 194
Query: 167 GD-PAGQ-----FNLG--ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD A Q + LG I + +E+ + L +++ G V +Q LA + G+ + + +
Sbjct: 195 GDWDASQMLSRFYILGENIPFDKEKGLYWLEKSAKQGGVISQEILANLYYSGQMLPLDKK 254
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+AA WY +AA+ A Y GE + + R W+++AA G +AQ +
Sbjct: 255 KAAYWYEQAAKEHNGSAAKMLGAIYYNGEDVKQNKELGRYWIEQAAKWGEPEAQRITSM- 313
Query: 279 LFTEGEMM----KAVVYLELATRAGETAA 303
+ E + + KA +L+ A AG+ A
Sbjct: 314 FYQESDTLEDKEKAEFWLKTAALAGDKEA 342
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+ Y + V G P F+L + + QE A+ G A + L + G GV ++
Sbjct: 59 TFYSKGDVEGIPK-DFHLALHWYQE--------AAKDGDKEAAQMIGLLYYNGDGVPIDI 109
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+AA W+ +AA G A + Y GEG+P + + W K+A G
Sbjct: 110 AKAAYWFEKAANAGNWDAARRLATLYINGEGVPKNVEKGISWYKKAIQSG 159
>gi|19074843|ref|NP_586349.1| similarity to SKT5 PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|19069568|emb|CAD25953.1| similarity to SKT5 PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|449328583|gb|AGE94860.1| skt5 protein [Encephalitozoon cuniculi]
Length = 590
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G F G GV +N + A++ F + + + A+ + G Y E E A +YR +
Sbjct: 176 GYCFLKGFGVERNEEIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYRLS 235
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A + + Q LG Y + ++A +L ++++ G+ Q LA C +G G +
Sbjct: 236 AKMENSYAQNALGNCYEEGKGVDRDLQKAFELYKKSALQGYPSGQCNLAFCYQKGIGTER 295
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA--DCGHGKAQL 273
NL++A WY RAA G RA +N CY G G R A W K +A D + L
Sbjct: 296 NLEKAFEWYKRAAIQGLSRAKHNIGYCYQNGLGTSPCMRSAVNWYKESAAEDNKYSIHAL 355
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAG 299
+HG G+ + + AV Y RAG
Sbjct: 356 GVCYQHGYGVPKDERL--AVRYFSEGVRAG 383
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 108/253 (42%), Gaps = 56/253 (22%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-E 154
+++ L G ++ GRGV +NL KA + + A ++ A G Y E +D+ +
Sbjct: 203 KDSTALYNIGFCYEEGRGVERNLIKAFEMYRLSAKMENSYAQNALGNCYEEGKGVDRDLQ 262
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQ---- 202
A LY+++A+ G P+GQ NL Y + E+A + +A+I G RA++
Sbjct: 263 KAFELYKKSALQGYPSGQCNLAFCYQKGIGTERNLEKAFEWYKRAAIQGLSRAKHNIGYC 322
Query: 203 --------------------------------LALCLHRGRGVDFNLQEAARWYLRAAEG 230
L +C G GV + + A R++
Sbjct: 323 YQNGLGTSPCMRSAVNWYKESAAEDNKYSIHALGVCYQHGYGVPKDERLAVRYFSEGVRA 382
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGE 284
G+ A+ + +LCY G G+ +S ++ MKRAA+ + AQ E G G T
Sbjct: 383 GFDEAIISLALCYRSGIGVRISPEKSFALMKRAAEMNNSSAQNTLGYYYEEGYG--TPKN 440
Query: 285 MMKAVVYLELATR 297
+ KAV + E + +
Sbjct: 441 LRKAVKWYETSAK 453
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 16/223 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++HG GV K+ A+ F +G G A++ L Y E + +L ++A
Sbjct: 356 GVCYQHGYGVPKDERLAVRYFSEGVRAGFDEAIISLALCYRSGIGVRISPEKSFALMKRA 415
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A + + + Q LG Y + +AVK ++ + A + L+ G V
Sbjct: 416 AEMNNSSAQNTLGYYYEEGYGTPKNLRKAVKWYETSAKRNNSWALFNLSTLYLNGNHVPA 475
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ + R +R+ + G RAM C+ G + R A + +A G+ KA
Sbjct: 476 DKELGIRLLIRSRDLGNPRAMNTLGYCFEKGIVVGKDPRLAFEHYTQALMNGYSKAGYSL 535
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQL 314
G G+ TE ++ KA+ Y A+ AGE A+ IL L
Sbjct: 536 GRCYESGIGTEVDLDKALYYFYKASSAGEEASLQRLKKILSSL 578
>gi|328793806|ref|XP_392802.4| PREDICTED: protein sel-1 homolog 1-like [Apis mellifera]
Length = 741
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ GRGV + ++AL F A G+ LAM G +Y E E A +++AA
Sbjct: 353 HYQGGRGVPLDHERALQYFQHAADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAA 412
Query: 165 VLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
LG+P GQ LG+ YL +A++ QA+ G V Q QL G GV +
Sbjct: 413 ELGNPVGQSGLGLMYLYGRGVERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGVRRD 472
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A +++ A++ G+V A YN + ++ G G+ S A + +K A+ G QL
Sbjct: 473 YKLANKYFSLASQSGHVLAFYNLAQMHATGTGMMRSCPAAVELLKNVAERGKWSDQLMIA 532
Query: 277 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 317
+ EG + +A V L G A IL + T
Sbjct: 533 HTDYREGRINEAFVNYALLAEMGYEVAQSNAAFILDKGETT 573
>gi|380023934|ref|XP_003695764.1| PREDICTED: LOW QUALITY PROTEIN: protein sel-1 homolog 1-like [Apis
florea]
Length = 741
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ GRGV + ++AL F A G+ LAM G +Y E E A +++AA
Sbjct: 353 HYQGGRGVPLDHERALQYFQHAADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAA 412
Query: 165 VLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
LG+P GQ LG+ YL +A++ QA+ G V Q QL G GV +
Sbjct: 413 ELGNPVGQSGLGLMYLYGRGVERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGVRRD 472
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A +++ A++ G+V A YN + ++ G G+ S A + +K A+ G QL
Sbjct: 473 YKLANKYFSLASQSGHVLAFYNLAQMHATGTGMMRSCPAAVELLKNVAERGKWSDQLMIA 532
Query: 277 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 317
+ EG + +A V L G A IL + T
Sbjct: 533 HTDYREGRINEAFVNYALLAEMGYEVAQSNAAFILDKGETT 573
>gi|397676939|ref|YP_006518477.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397628|gb|AFN56955.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 241
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E+AV +A+ G +QY L GRGV + ++AA WY +AA+ +++A YN L
Sbjct: 63 EKAVYWYQKAADKGMKESQYNLGNAYLYGRGVGIDYEKAAFWYRKAADQNFIQAQYNLGL 122
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG------EMMKAVVYLELA 295
Y G+GLP S QA W ++AA+ G KAQ LG+F ++A+ ++E A
Sbjct: 123 LYEKGQGLPKSDEQAAFWWQKAAEQGEAKAQFN--LGVFYHNGRAVPKNNVRAIFWMEQA 180
Query: 296 TRAG 299
+ G
Sbjct: 181 AQQG 184
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 118 RKNLDKALDSFLKGAAR-GSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQ 172
++ D+ + S L+G A+ G++LA G Y E A+ Y++AA G Q
Sbjct: 22 KERYDREMISSLEGRAKAGNSLAEEVLGEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQ 81
Query: 173 FNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+NLG +YL V + Y+ A+ ++AQY L L +G+G+ + ++AA W+
Sbjct: 82 YNLGNAYLYGRGVGIDYEKAAFWYRKAADQNFIQAQYNLGLLYEKGQGLPKSDEQAAFWW 141
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----EHGLGLF 280
+AAE G +A +N + Y G +P ++ +A WM++AA G AQ+ + G
Sbjct: 142 QKAAEQGEAKAQFNLGVFYHNGRAVPKNNVRAIFWMEQAAQQGLIDAQILLAMAYASGQG 201
Query: 281 TEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 315
+ KA+ + + A G AA V LQ LS
Sbjct: 202 APKDKNKAIYWYQKAADQGNIAAKEV----LQTLS 232
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV + +KA + K A + A + GL+Y
Sbjct: 85 GNAYLYGRGVGIDYEKAAFWYRKAADQNFIQAQYNLGLLY-------------------- 124
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
GQ G+ E+A +A+ G +AQ+ L + H GR V N A W +A
Sbjct: 125 -EKGQ---GLPKSDEQAAFWWQKAAEQGEAKAQFNLGVFYHNGRAVPKNNVRAIFWMEQA 180
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
A+ G + A ++ Y+ G+G P +A W ++AAD G+
Sbjct: 181 AQQGLIDAQILLAMAYASGQGAPKDKNKAIYWYQKAADQGN 221
>gi|393786768|ref|ZP_10374900.1| hypothetical protein HMPREF1068_01180 [Bacteroides nordii
CL02T12C05]
gi|392658003|gb|EIY51633.1| hypothetical protein HMPREF1068_01180 [Bacteroides nordii
CL02T12C05]
Length = 828
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 105 LRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDK---KEAAISL 159
+ G + +G G ++ +A++ + K A G+ LAM+ G Y ++ DK E A +
Sbjct: 606 FKMGDYYFYGYGPCLEDNKQAVEWYEKAIANGNALAMLRLGEYYLYDYDKLNESEKAFTY 665
Query: 160 YRQAA---VLGDPAG---QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
++QAA + G + +G+ + EA K A+ G+ + Y+ LC + G GV
Sbjct: 666 FKQAAEQEFYNEGIGICYEMGIGVEENETEAFKYYTLAANNGNTMSMYRTGLCHYNGVGV 725
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
NLQEA RW+ AA + A Y +GEG + +W+++AA+ G KAQ
Sbjct: 726 KQNLQEAFRWFNDAAGNENIHACYYVGKMLMYGEGCTPNPENGLQWLQKAAEAGSDKAQF 785
Query: 274 EHG 276
E G
Sbjct: 786 ELG 788
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE 182
K+ + + K AA+GS A+V+ G + E A L+ +AA P G + +G YL E
Sbjct: 448 KSKEYYEKAAAQGSPYALVELGFLQENEQNYEQAFELFSKAAEQEYPYGMYRVGY-YLSE 506
Query: 183 ---------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
E +A+ AG A + + C G GV+ + +A WY + E
Sbjct: 507 GIKGDAQPEEGAAWYLKAAEAGDTDAMFAMGRCYKNGYGVEEDPDKALAWYQKGEEKEDP 566
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
R + L Y G G+ + +A ++M +AA+ +G AQ + G F
Sbjct: 567 RCITELGLAYENGYGVEENPHKAVEYMTKAAELNYGYAQFKMGDYYF 613
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 80/204 (39%), Gaps = 47/204 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G+ +K+G GV ++ DKAL + KG + + + GL Y + A+ +A
Sbjct: 537 GRCYKNGYGVEEDPDKALAWYQKGEEKEDPRCITELGLAYENGYGVEENPHKAVEYMTKA 596
Query: 164 AVLGDPAGQFNLGISYL---------QEEAVKLLYQASIAGHVRAQYQL----------- 203
A L QF +G Y ++AV+ +A G+ A +L
Sbjct: 597 AELNYGYAQFKMGDYYFYGYGPCLEDNKQAVEWYEKAIANGNALAMLRLGEYYLYDYDKL 656
Query: 204 -----------------------ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
+C G GV+ N EA ++Y AA G +MY T
Sbjct: 657 NESEKAFTYFKQAAEQEFYNEGIGICYEMGIGVEENETEAFKYYTLAANNGNTMSMYRTG 716
Query: 241 LCYSFGEGLPLSHRQARKWMKRAA 264
LC+ G G+ + ++A +W AA
Sbjct: 717 LCHYNGVGVKQNLQEAFRWFNDAA 740
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 113 HGRGV---RKNLDKALDSFLKGAARGSTLAMVDAGLM----YWEMDKKEAAISLYRQAAV 165
+ RG+ + +KAL+ + K AA + A L Y + + + Y +AA
Sbjct: 399 YERGILSENPDYEKALEYYEKSAALENNDGYCRAALYLANGYAGITDEAKSKEYYEKAAA 458
Query: 166 LGDPAGQFNLGISYLQE------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
G P LG +LQE +A +L +A+ + Y++ L G D +E
Sbjct: 459 QGSPYALVELG--FLQENEQNYEQAFELFSKAAEQEYPYGMYRVGYYLSEGIKGDAQPEE 516
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL-- 277
A WYL+AAE G AM+ CY G G+ +A W ++ + + E GL
Sbjct: 517 GAAWYLKAAEAGDTDAMFAMGRCYKNGYGVEEDPDKALAWYQKGEEKEDPRCITELGLAY 576
Query: 278 --GLFTEGEMMKAVVYLELATRAGE 300
G E KAV Y+ T+A E
Sbjct: 577 ENGYGVEENPHKAVEYM---TKAAE 598
>gi|340726986|ref|XP_003401832.1| PREDICTED: protein sel-1 homolog 1-like [Bombus terrestris]
Length = 741
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 13/220 (5%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ GRGV + ++AL F A G+ LAM G +Y E E A +++AA
Sbjct: 354 YQGGRGVPLDHERALQYFQHAADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAAE 413
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG+P GQ LG+ YL +A++ QA+ G V Q QL G GV +
Sbjct: 414 LGNPVGQSGLGLMYLYGRGVERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGVRRDY 473
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A +++ A++ G+V A YN + ++ G G+ S A + +K A+ G QL
Sbjct: 474 KLANKYFSLASQSGHVLAFYNLAQMHATGTGMMRSCPAAVELLKNVAERGKWSDQLMVAH 533
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 317
+ EG + +A V L G A IL + T
Sbjct: 534 TDYREGRINEAFVNYALLAEMGYEVAQSNAAFILDKGETT 573
>gi|432592981|ref|ZP_19829299.1| hypothetical protein A1SS_02399 [Escherichia coli KTE60]
gi|431127959|gb|ELE30251.1| hypothetical protein A1SS_02399 [Escherichia coli KTE60]
Length = 647
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQ 272
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G G A
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAM 510
Query: 273 LEHGLGLFTEGE 284
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ Y + + A+ G+ A Y L + G V +L+ A W+ RAA+ + A
Sbjct: 303 GLFYYPSSVYQSCFHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDA 362
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+Y + YS G G + +ARKW AA G+ AQ E
Sbjct: 363 LYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYE 401
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLG-DPAGQ--FNLGISYLQE-------- 182
A +Y + +E A+ + +AA G D AG + LG YL
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 528
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA + L A+ G + A + LA + L+ + + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALHWYEKAARLGATEAQHQTAA 588
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|26248017|ref|NP_754057.1| hypothetical protein c2163 [Escherichia coli CFT073]
gi|227885812|ref|ZP_04003617.1| TPR repeat-containing protein [Escherichia coli 83972]
gi|300994373|ref|ZP_07180878.1| DnaJ domain protein [Escherichia coli MS 45-1]
gi|301050897|ref|ZP_07197748.1| DnaJ domain protein [Escherichia coli MS 185-1]
gi|386629456|ref|YP_006149176.1| hypothetical protein i02_1982 [Escherichia coli str. 'clone D i2']
gi|386634376|ref|YP_006154095.1| hypothetical protein i14_1982 [Escherichia coli str. 'clone D i14']
gi|386639289|ref|YP_006106087.1| putative TPR repeat protein [Escherichia coli ABU 83972]
gi|422366869|ref|ZP_16447326.1| DnaJ domain protein [Escherichia coli MS 153-1]
gi|432411980|ref|ZP_19654646.1| hypothetical protein WG9_02459 [Escherichia coli KTE39]
gi|432436068|ref|ZP_19678461.1| hypothetical protein A13M_01776 [Escherichia coli KTE188]
gi|432456791|ref|ZP_19698978.1| hypothetical protein A15C_02577 [Escherichia coli KTE201]
gi|432495825|ref|ZP_19737624.1| hypothetical protein A173_02984 [Escherichia coli KTE214]
gi|432504491|ref|ZP_19746221.1| hypothetical protein A17E_01544 [Escherichia coli KTE220]
gi|432523866|ref|ZP_19760998.1| hypothetical protein A17Y_01978 [Escherichia coli KTE230]
gi|432568758|ref|ZP_19805276.1| hypothetical protein A1SE_02338 [Escherichia coli KTE53]
gi|432607588|ref|ZP_19843777.1| hypothetical protein A1U7_02586 [Escherichia coli KTE67]
gi|432651199|ref|ZP_19886956.1| hypothetical protein A1W7_02200 [Escherichia coli KTE87]
gi|432783643|ref|ZP_20017824.1| hypothetical protein A1SY_02482 [Escherichia coli KTE63]
gi|432978366|ref|ZP_20167188.1| hypothetical protein A15S_04281 [Escherichia coli KTE209]
gi|432995425|ref|ZP_20184036.1| hypothetical protein A17A_02508 [Escherichia coli KTE218]
gi|433000001|ref|ZP_20188531.1| hypothetical protein A17K_02335 [Escherichia coli KTE223]
gi|433058149|ref|ZP_20245208.1| hypothetical protein WIM_01918 [Escherichia coli KTE124]
gi|433087296|ref|ZP_20273680.1| hypothetical protein WIY_01744 [Escherichia coli KTE137]
gi|433115614|ref|ZP_20301418.1| hypothetical protein WKA_01803 [Escherichia coli KTE153]
gi|433125251|ref|ZP_20310826.1| hypothetical protein WKE_01747 [Escherichia coli KTE160]
gi|433139314|ref|ZP_20324585.1| hypothetical protein WKM_01595 [Escherichia coli KTE167]
gi|433149262|ref|ZP_20334298.1| hypothetical protein WKQ_01913 [Escherichia coli KTE174]
gi|433212566|ref|ZP_20396169.1| hypothetical protein WI3_01745 [Escherichia coli KTE99]
gi|442604425|ref|ZP_21019270.1| FIG00642536: hypothetical protein [Escherichia coli Nissle 1917]
gi|26108420|gb|AAN80622.1|AE016761_197 Hypothetical protein c2163 [Escherichia coli CFT073]
gi|227837385|gb|EEJ47851.1| TPR repeat-containing protein [Escherichia coli 83972]
gi|300297416|gb|EFJ53801.1| DnaJ domain protein [Escherichia coli MS 185-1]
gi|300406219|gb|EFJ89757.1| DnaJ domain protein [Escherichia coli MS 45-1]
gi|307553781|gb|ADN46556.1| putative TPR repeat protein [Escherichia coli ABU 83972]
gi|315290465|gb|EFU49840.1| DnaJ domain protein [Escherichia coli MS 153-1]
gi|355420355|gb|AER84552.1| hypothetical protein i02_1982 [Escherichia coli str. 'clone D i2']
gi|355425275|gb|AER89471.1| hypothetical protein i14_1982 [Escherichia coli str. 'clone D i14']
gi|430935206|gb|ELC55528.1| hypothetical protein WG9_02459 [Escherichia coli KTE39]
gi|430964490|gb|ELC81937.1| hypothetical protein A13M_01776 [Escherichia coli KTE188]
gi|430982673|gb|ELC99362.1| hypothetical protein A15C_02577 [Escherichia coli KTE201]
gi|431024368|gb|ELD37533.1| hypothetical protein A173_02984 [Escherichia coli KTE214]
gi|431039474|gb|ELD50294.1| hypothetical protein A17E_01544 [Escherichia coli KTE220]
gi|431052968|gb|ELD62604.1| hypothetical protein A17Y_01978 [Escherichia coli KTE230]
gi|431100609|gb|ELE05579.1| hypothetical protein A1SE_02338 [Escherichia coli KTE53]
gi|431138686|gb|ELE40498.1| hypothetical protein A1U7_02586 [Escherichia coli KTE67]
gi|431191068|gb|ELE90453.1| hypothetical protein A1W7_02200 [Escherichia coli KTE87]
gi|431329511|gb|ELG16797.1| hypothetical protein A1SY_02482 [Escherichia coli KTE63]
gi|431480538|gb|ELH60257.1| hypothetical protein A15S_04281 [Escherichia coli KTE209]
gi|431507138|gb|ELH85424.1| hypothetical protein A17A_02508 [Escherichia coli KTE218]
gi|431510018|gb|ELH88265.1| hypothetical protein A17K_02335 [Escherichia coli KTE223]
gi|431570792|gb|ELI43700.1| hypothetical protein WIM_01918 [Escherichia coli KTE124]
gi|431607016|gb|ELI76387.1| hypothetical protein WIY_01744 [Escherichia coli KTE137]
gi|431635140|gb|ELJ03355.1| hypothetical protein WKA_01803 [Escherichia coli KTE153]
gi|431646636|gb|ELJ14128.1| hypothetical protein WKE_01747 [Escherichia coli KTE160]
gi|431661692|gb|ELJ28504.1| hypothetical protein WKM_01595 [Escherichia coli KTE167]
gi|431671926|gb|ELJ38199.1| hypothetical protein WKQ_01913 [Escherichia coli KTE174]
gi|431734848|gb|ELJ98224.1| hypothetical protein WI3_01745 [Escherichia coli KTE99]
gi|441714682|emb|CCQ05247.1| FIG00642536: hypothetical protein [Escherichia coli Nissle 1917]
Length = 647
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQ 272
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G G A
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAM 510
Query: 273 LEHGLGLFTEGE 284
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ Y + A+ G+ A Y L + G V +L+ A W+ RAA+ + A
Sbjct: 303 GLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDA 362
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+Y + YS G G + +ARKW AA G+ AQ E
Sbjct: 363 LYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYE 401
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLG-DPAGQ--FNLGISYLQE-------- 182
A +Y + +E A+ + +AA G D AG + LG YL
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 528
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA + L A+ G + A + LA + L+ + + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALHWYEKAARLGATEAQHQTAA 588
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|191171759|ref|ZP_03033306.1| putative TPR repeat protein [Escherichia coli F11]
gi|432471063|ref|ZP_19713110.1| hypothetical protein A15M_01944 [Escherichia coli KTE206]
gi|432713474|ref|ZP_19948515.1| hypothetical protein WCI_01839 [Escherichia coli KTE8]
gi|433077844|ref|ZP_20264395.1| hypothetical protein WIU_01715 [Escherichia coli KTE131]
gi|190908089|gb|EDV67681.1| putative TPR repeat protein [Escherichia coli F11]
gi|430998281|gb|ELD14522.1| hypothetical protein A15M_01944 [Escherichia coli KTE206]
gi|431257277|gb|ELF50201.1| hypothetical protein WCI_01839 [Escherichia coli KTE8]
gi|431597515|gb|ELI67421.1| hypothetical protein WIU_01715 [Escherichia coli KTE131]
Length = 647
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 502
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 120/278 (43%), Gaps = 49/278 (17%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 290
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISL 159
G +K L+ S L A +G +LA G MY+E D+ + A +
Sbjct: 291 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNW 350
Query: 160 YRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+ +AA + LGI Y EA K A+ G+ AQY+LA
Sbjct: 351 FTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYELARISRFAV 410
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
N +EA +WYL AA G+ A Y Y G G+ QA +W ++A+ G+ A
Sbjct: 411 EPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYLHA 470
Query: 272 QLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 304
Q H L++ E + KA+ + T+A + AD
Sbjct: 471 QY-HTARLYSGSESIPQDQEKALYWF---TKAAKNGAD 504
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLG-DPAGQ--FNLGISYL--------QE 182
A +Y + +E A+ + +AA G D AG + LG YL
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLINNDDPENNA 528
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA + L A+ G + A + LA + L+ + + A WY +AA A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLWSPEAQHQTAA 588
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|422377178|ref|ZP_16457421.1| DnaJ domain protein [Escherichia coli MS 60-1]
gi|324011515|gb|EGB80734.1| DnaJ domain protein [Escherichia coli MS 60-1]
Length = 647
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 502
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 119/278 (42%), Gaps = 49/278 (17%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 290
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL---- 159
G +K L+ S L A +G +LA G MY+E D+ + L
Sbjct: 291 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNW 350
Query: 160 YRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+ +AA + LGI Y EA K A+ G+ AQY+LA
Sbjct: 351 FTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYELARISRFAV 410
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
N +EA +WYL AA G+ A Y Y G G+ QA +W ++A+ G+ A
Sbjct: 411 EPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYLHA 470
Query: 272 QLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 304
Q H L++ E + KA+ + T+A + AD
Sbjct: 471 QY-HTARLYSGSESIPQDQEKALYWF---TKAAKNGAD 504
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLG-DPAGQ--FNLGISYL--------QE 182
A +Y + +E A+ + +AA G D AG + LG YL
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLINNDDPENNA 528
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA + L A+ G + A + LA + L+ + + A WY +AA A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLWSPEAQHQTAA 588
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|300987532|ref|ZP_07178239.1| Sel1 repeat protein, partial [Escherichia coli MS 200-1]
gi|300306102|gb|EFJ60622.1| Sel1 repeat protein [Escherichia coli MS 200-1]
Length = 578
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 262 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 321
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 322 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 381
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 382 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 433
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 120/278 (43%), Gaps = 49/278 (17%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 168 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 221
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISL 159
G +K L+ S L A +G +LA G MY+E D+ + A +
Sbjct: 222 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNW 281
Query: 160 YRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+ +AA + LGI Y EA K A+ G+ AQY+LA
Sbjct: 282 FTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYELARISRFAV 341
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
N +EA +WYL AA G+ A Y Y G G+ QA +W ++A+ G+ A
Sbjct: 342 EPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYLHA 401
Query: 272 QLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 304
Q H L++ E + KA+ + T+A + AD
Sbjct: 402 QY-HTARLYSGSESIPQDQEKALYWF---TKAAKNGAD 435
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 340 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 399
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLG-DPAGQ--FNLGISYL--------QE 182
A +Y + +E A+ + +AA G D AG + LG YL
Sbjct: 400 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLINNDDPENNA 459
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA + L A+ G + A + LA + L+ + + A WY +AA A + T+
Sbjct: 460 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLWSPEAQHQTAA 519
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 520 MYAQGTGTKIDNKQAWMWLTIAGN 543
>gi|408906728|emb|CCM12089.1| hypothetical protein [Helicobacter heilmannii ASB1.4]
Length = 568
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 71/264 (26%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVL 166
F+ G+GV + KA++ + K A GS A+V G M++E M K A+ +++AA L
Sbjct: 152 FRTGKGVGVDYQKAIEYYKKAANLGSVKALVSLGTMHYEGQGMAKNSTKALDYFKEAAKL 211
Query: 167 GDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD +NL G++ +A++ L +A+ G +A Y LA G GVD N++
Sbjct: 212 GDAKAFYNLAIMVESGQGMAKNSTKALEFLKEAAKLGFAKATYTLAAMYEIGEGVDQNMK 271
Query: 219 EAAR-------------------------------------WYLRAAEGGYVRAM----- 236
EA + +Y +AA+ G V AM
Sbjct: 272 EAIKLYQEAGSMGDSEALCSLATLYRTGRGGVEQDKFKALAYYQQAADLGDVNAMGNLNA 331
Query: 237 -------------YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GL 279
YN + Y+ G+G+P ++A ++ K+AA+ G+ KA G+ GL
Sbjct: 332 MEDQTVEQKAQTLYNLGVVYASGDGMPKDEKKALEYFKKAANLGYAKAYYNLGVIYSGGL 391
Query: 280 FTEGEMMKAVVYLELATRAGETAA 303
+ + KA + A + GE A
Sbjct: 392 GVKQDYAKAFECFQEAAKLGEAKA 415
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK 153
++A L G + G G+ K+ KAL+ F K A G A + G++Y + D
Sbjct: 339 QKAQTLYNLGVVYASGDGMPKDEKKALEYFKKAANLGYAKAYYNLGVIYSGGLGVKQDYA 398
Query: 154 EAAISLYRQAAVLGDPAGQFNLGI--SYLQ------EEAVKLLYQASIAGHVRAQYQLAL 205
+A +++AA LG+ +NLG+ Y + +A++ QA G+ A + L
Sbjct: 399 KA-FECFQEAAKLGEAKAYYNLGLMCEYAKGVEKSMPQAIRYYKQAGALGNASAMHHLGT 457
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
H G+ V + Q+A ++ AA G V+ YN + YS GEG+ + RQA + ++AA+
Sbjct: 458 LYHVGKAVLKDPQKAFSYFREAARLGSVKDCYNLGVLYSKGEGIERNTRQALDYFEQAAN 517
Query: 266 CGHGKAQLEHGLGLFTEGEM 285
G A G+ L+ +GEM
Sbjct: 518 LGSSDAMYNMGV-LYYQGEM 536
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEA 155
L A L+ G + G+GV KN DKAL F + A G + V+ G+MY K++
Sbjct: 67 LGSARALVGLGVVYAGGKGVEKNDDKALHYFQQAADLGDSQGYVNLGVMYDLGRGVKRDC 126
Query: 156 AISLY--RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLAL 205
+LY ++AA L D ++ + + + V + YQ +I G V+A L
Sbjct: 127 QKALYYFQKAADLEDIHALNHIALIFRTGKGVGVDYQKAIEYYKKAANLGSVKALVSLGT 186
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ G+G+ N +A ++ AA+ G +A YN ++ G+G+ + +A +++K AA
Sbjct: 187 MHYEGQGMAKNSTKALDYFKEAAKLGDAKAFYNLAIMVESGQGMAKNSTKALEFLKEAAK 246
Query: 266 CGHGKA 271
G KA
Sbjct: 247 LGFAKA 252
>gi|419913972|ref|ZP_14432381.1| TPR repeat-containing protein, partial [Escherichia coli KD1]
gi|388388000|gb|EIL49598.1| TPR repeat-containing protein, partial [Escherichia coli KD1]
Length = 583
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 267 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 326
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 327 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 386
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 387 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 438
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ Y + A+ G+ A Y L + G V +L+ A W+ RAA+ + A
Sbjct: 239 GLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDA 298
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+Y + YS G G + +ARKW AA G+ AQ E
Sbjct: 299 LYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYE 337
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 345 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 404
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLG-DPAGQ--FNLGISYLQE-------- 182
A +Y + +E A+ + +AA G D AG + LG YL
Sbjct: 405 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 464
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA + L A+ G + A + LA + L+ + + + A WY +AA G A + T+
Sbjct: 465 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALHWYEKAARLGATEAQHQTAA 524
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 525 MYAQGTGTKIDNKQAWMWLTIAGN 548
>gi|422805784|ref|ZP_16854216.1| Sel1 [Escherichia fergusonii B253]
gi|424816061|ref|ZP_18241212.1| hypothetical protein ECD227_1178 [Escherichia fergusonii ECD227]
gi|324113509|gb|EGC07484.1| Sel1 [Escherichia fergusonii B253]
gi|325497081|gb|EGC94940.1| hypothetical protein ECD227_1178 [Escherichia fergusonii ECD227]
Length = 644
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
G + G V ++L A + F + A A G+MY + + IS R+ A
Sbjct: 331 GNMYYEGDEVSQDLKLAFNWFTRAAQHNVIEAQYALGIMYRDGRGMDKNISEARKWLLLA 390
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ + IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYEIARISRFAVEPLRNYEEALQWYLSAATQGHELAQYELGQMYIQGIGVER 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A RW+L++AE GY+ A Y+T+ Y + +P +A W +AA G G A E
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYCESKSIPQDQEKALYWFTKAAKNGAGDAMYEL 510
Query: 276 GLGLFTEGE 284
G T +
Sbjct: 511 GKYYLTNND 519
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 29/201 (14%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHELAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEM----DKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAV 185
A +Y E +E A+ + +AA G + LG YL EA+
Sbjct: 469 HAQYHTARLYCESKSIPQDQEKALYWFTKAAKNGAGDAMYELGKYYLTNNDDPENNAEAI 528
Query: 186 KLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+ L A+ G + A + LA + L+ + + + A WY +AA G A ++T+ Y+
Sbjct: 529 QWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALNWYEKAARLGSSEAQHHTAAMYA 588
Query: 245 FGEGLPLSHRQARKWMKRAAD 265
G G + ++QA W+ A +
Sbjct: 589 QGTGTKIDNKQAWMWLTIAGN 609
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ Y + A+ G+ A Y L + G V +L+ A W+ RAA+ + A
Sbjct: 303 GLFYYPSSVYQSCLHAAEQGYSLAWYSLGNMYYEGDEVSQDLKLAFNWFTRAAQHNVIEA 362
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
Y + Y G G+ + +ARKW+ AA G+ AQ E
Sbjct: 363 QYALGIMYRDGRGMDKNISEARKWLLLAAQNGNTSAQYE 401
>gi|188494876|ref|ZP_03002146.1| putative TPR repeat protein [Escherichia coli 53638]
gi|432369883|ref|ZP_19612972.1| hypothetical protein WCM_03830 [Escherichia coli KTE10]
gi|432485514|ref|ZP_19727430.1| hypothetical protein A15Y_01993 [Escherichia coli KTE212]
gi|432670841|ref|ZP_19906372.1| hypothetical protein A1Y7_02377 [Escherichia coli KTE119]
gi|433173623|ref|ZP_20358158.1| hypothetical protein WGQ_01885 [Escherichia coli KTE232]
gi|188490075|gb|EDU65178.1| putative TPR repeat protein [Escherichia coli 53638]
gi|430885510|gb|ELC08381.1| hypothetical protein WCM_03830 [Escherichia coli KTE10]
gi|431015911|gb|ELD29458.1| hypothetical protein A15Y_01993 [Escherichia coli KTE212]
gi|431210915|gb|ELF08898.1| hypothetical protein A1Y7_02377 [Escherichia coli KTE119]
gi|431693889|gb|ELJ59283.1| hypothetical protein WGQ_01885 [Escherichia coli KTE232]
Length = 647
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A G+MY + + IS R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNIIDAQYALGIMYSDGRGTDKNISEARKWFLLA 390
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNASAQYKLARISRFADEPLRNYEEALQWYLSAATQGHDLAQYELGQMYIQGIGVER 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQ 272
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G G A
Sbjct: 451 DEVQAHRWFLQSAEQGYLYAQYHTARLYSESESIPQDQEKALYWFTKAAKNGADGAGDAM 510
Query: 273 LEHGLGLFTEGE 284
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G+ + G GV ++ +A FL+ A +G A +Y E + +E A+ + +A
Sbjct: 439 GQMYIQGIGVERDEVQAHRWFLQSAEQGYLYAQYHTARLYSESESIPQDQEKALYWFTKA 498
Query: 164 AVLG-DPAGQ--FNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLA-LCLHRGR 211
A G D AG + LG YL EA++ L A+ G + A + LA + L+ +
Sbjct: 499 AKNGADGAGDAMYELGKYYLTNNDDPENNAEAIQWLTGAAQRGRIEAIFLLAEMYLYGTK 558
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ + A WY +AA G A + T+ Y+ G G + ++QA W+ A +
Sbjct: 559 DIAKDENHALHWYEKAARLGSTEAQHQTAAMYAQGTGTKIDNKQAWMWLTIAGN 612
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ Y + A+ G+ A Y L + G V +L+ A W+ RAA+ + A
Sbjct: 303 GLFYYPSSVFQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNIIDA 362
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
Y + YS G G + +ARKW AA G+ AQ
Sbjct: 363 QYALGIMYSDGRGTDKNISEARKWFLLAAQNGNASAQ 399
>gi|75674382|ref|YP_316803.1| Sel1 repeat-containing protein [Nitrobacter winogradskyi Nb-255]
gi|74419252|gb|ABA03451.1| sel1-like repeat protein [Nitrobacter winogradskyi Nb-255]
Length = 1059
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R AA+ GDPA F +G+ Y + +EA K +A+ AG V A ++L +G G
Sbjct: 831 RSAALQGDPAASFEVGVRYAEGKGVTVNYDEAAKWYERAAHAGIVPAMFRLGALHEKGLG 890
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
++ A R+YL+AA+ G +AM+N ++ + G G + A +W +AA+ G +Q
Sbjct: 891 TSKDVDTARRYYLQAADRGNAKAMHNLAVLDADGGGKGADYVSAAQWFSKAAERGIADSQ 950
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
G+ G+ E + K+ + LA G+ + ++ + ++L S A L V +
Sbjct: 951 YNLGILYARGIGVEQNLAKSYKWFSLAAAQGDVDSGRKRDEVAKRLDPPSLAAAKLAVQT 1010
Query: 329 WRAMP 333
+ P
Sbjct: 1011 FVVTP 1015
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G R+ G+GV N D+A + + A G AM G ++
Sbjct: 846 GVRYAEGKGVTVNYDEAAKWYERAAHAGIVPAMFRLGALH-------------------- 885
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ LG S + A + QA+ G+ +A + LA+ G G + AA+W+ +A
Sbjct: 886 ----EKGLGTSKDVDTARRYYLQAADRGNAKAMHNLAVLDADGGGKGADYVSAAQWFSKA 941
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
AE G + YN + Y+ G G+ + ++ KW AA G
Sbjct: 942 AERGIADSQYNLGILYARGIGVEQNLAKSYKWFSLAAAQG 981
>gi|432431914|ref|ZP_19674346.1| hypothetical protein A13K_02199 [Escherichia coli KTE187]
gi|432844579|ref|ZP_20077478.1| hypothetical protein A1YS_02218 [Escherichia coli KTE141]
gi|430953463|gb|ELC72361.1| hypothetical protein A13K_02199 [Escherichia coli KTE187]
gi|431394906|gb|ELG78419.1| hypothetical protein A1YS_02218 [Escherichia coli KTE141]
Length = 647
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 502
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ Y + A+ G+ A Y L + G V +L+ A W+ RAA+ + A
Sbjct: 303 GLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDA 362
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+Y + YS G G + +ARKW AA G+ AQ E
Sbjct: 363 LYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYE 401
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLG-DPAGQ--FNLGISYLQE-------- 182
A +Y + +E A+ + +AA G D AG + LG YL
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 528
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA + L A+ G + A + LA + L+ + + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALHWYEKAARLGATEAQHQTAA 588
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|428173955|gb|EKX42854.1| hypothetical protein GUITHDRAFT_58106, partial [Guillardia theta
CCMP2712]
Length = 212
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYR 161
R G + GRGVR++ +A+ FL+ A A + G +Y + E AI R
Sbjct: 30 RLGMYYLEGRGVRRSTREAV-RFLERAGETVAAAALLLGRLYADGSLVEKNVVMAIGWLR 88
Query: 162 QAAVLGDPAGQFNLGISYLQEEA-----VKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
+A LG P + L + QE A V LL Q + +G V A+ +LA G+GV +
Sbjct: 89 KAQDLGHPGAEKELKSRFQQEVAGRRLKVGLLQQQAASGDVDAKCKLAALHFEGQGVQKD 148
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+A + Y AA GG + AM LCY G G+ S + ++W+ RAA GHG AQLE
Sbjct: 149 EPKAFQLYKEAAVGGQLEAMCCVGLCYLSGRGVKSSVEEGKRWVMRAAYLGHGIAQLE 206
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 180 LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
L+ EA A+I GH AQY+L + GRGV + +EA R+ RA E A+
Sbjct: 8 LETEAADWYRAAAIQGHAEAQYRLGMYYLEGRGVRRSTREAVRFLERAGETVAAAALLLG 67
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
L Y+ G + + A W+++A D GH A+ E
Sbjct: 68 RL-YADGSLVEKNVVMAIGWLRKAQDLGHPGAEKE 101
>gi|110641882|ref|YP_669612.1| hypothetical protein ECP_1708 [Escherichia coli 536]
gi|110343474|gb|ABG69711.1| putative TPR repeat protein [Escherichia coli 536]
Length = 647
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 502
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 119/278 (42%), Gaps = 49/278 (17%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 290
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL---- 159
G +K L+ S L A +G +LA G MY+E D+ + L
Sbjct: 291 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNW 350
Query: 160 YRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+ +AA + LGI Y EA K A+ G+ AQY+LA
Sbjct: 351 FTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYELARISRFAV 410
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
N +EA +WYL AA G+ A Y Y G G+ QA +W ++A+ G+ A
Sbjct: 411 EPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYLHA 470
Query: 272 QLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 304
Q H L++ E + KA+ + T+A + AD
Sbjct: 471 QY-HTARLYSGSESIPQDQEKALYWF---TKAAKNGAD 504
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLG-DPAGQ--FNLGISYL--------QE 182
A +Y + +E A+ + +AA G D AG + LG YL
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLINNDDPENNA 528
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA + L A+ G + A + LA + L+ + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLGSPEAQHQTAA 588
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|384412134|ref|YP_005621499.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932508|gb|AEH63048.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 264
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 75 SFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR 134
S + + +A +L+ ++ N P A+ G + G V + KAL + +
Sbjct: 51 SSNIDKSKALTLIQQAANKGFAPAEYAL-----GTFYYKGEAVAADKSKALYWYQQAVTH 105
Query: 135 GSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKL--- 187
G A + G MY+ D K ++ LY+QAA G+ Q NLG+ + + +AV L
Sbjct: 106 GDADAALALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDKA 165
Query: 188 --LY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
LY QA+ G+ +A+ L + G GV + +A WY +AA G +A +
Sbjct: 166 KALYWYQQAADKGNPQAELILGNMYYNGDGVAVDKAKALSWYQQAANHGLAQAELALGIM 225
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ GEG+ + A W+K+AA+ G+ A+ +
Sbjct: 226 FYNGEGVTVDKNNAAYWLKQAANHGNDTAKYQ 257
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAV 165
++ HG + KAL + A +G A G Y++ + K A+ Y+QA
Sbjct: 45 KYAHGDSSNIDKSKALTLIQQAANKGFAPAEYALGTFYYKGEAVAADKSKALYWYQQAVT 104
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD LG Y + ++V L QA+ G+ +AQ L L RG V +
Sbjct: 105 HGDADAALALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDK 164
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A WY +AA+ G +A Y G+G+ + +A W ++AA+ HG AQ E L
Sbjct: 165 AKALYWYQQAADKGNPQAELILGNMYYNGDGVAVDKAKALSWYQQAAN--HGLAQAELAL 222
Query: 278 GL-FTEGEMM-----KAVVYLELATRAGETAADH 305
G+ F GE + A +L+ A G A +
Sbjct: 223 GIMFYNGEGVTVDKNNAAYWLKQAANHGNDTAKY 256
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
+A L G + +G + + K++D + + A +G+ A ++ GLM+ D K
Sbjct: 107 DADAALALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDKAK 166
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCL 207
A+ Y+QAA G+P + LG Y + V + QA+ G +A+ L +
Sbjct: 167 ALYWYQQAADKGNPQAELILGNMYYNGDGVAVDKAKALSWYQQAANHGLAQAELALGIMF 226
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+ G GV + AA W +AA G A Y L ++
Sbjct: 227 YNGEGVTVDKNNAAYWLKQAANHGNDTAKYQLKLWFN 263
>gi|323453918|gb|EGB09789.1| hypothetical protein AURANDRAFT_24792 [Aureococcus anophagefferens]
Length = 382
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAG 171
+HG GV+ + KA+ + A RG A + ++ +K E A+ Y +A G G
Sbjct: 203 RHGSGVKLDKKKAMKLYRAAADRGDAFAQGNLAVLLSSEEKFEEAVRYYALSADQGYTPG 262
Query: 172 QFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
+ LG+ Y + ++ L +A+ G A LA R R + NL+EA RW
Sbjct: 263 ETFLGMCYSDGKGTEVDLGKARYWLERAAAKGDEHAIENLAHLNARLRLYNQNLEEAFRW 322
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+ AA+ G A +NT Y G+G+ L+ +AR+++ RAA GHGKA
Sbjct: 323 FKLAADQGLTGAEFNTGFSYLTGKGVELNFEEARRFLSRAAGKGHGKA 370
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 103/229 (44%), Gaps = 14/229 (6%)
Query: 104 LLRWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAI 157
+ G ++ GR G+ K+ KA + + G AMV G +Y ++DKK+A
Sbjct: 53 ITNLGNAYRFGRVGLVKSDKKAAKIYRRAVELGDVDAMVRLGYLYATGSGVKLDKKKAE- 111
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQ-----EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
LYR AA GD GQ NLG S L EEA + A+ G A+ L C G G
Sbjct: 112 ELYRAAADRGDAFGQINLG-SLLGSEEKFEEAFRYFALAADQGCTFAENSLGYCYRDGDG 170
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTS-LCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+ +L +A W RAA GY A+ N + L G G+ L ++A K + AAD G A
Sbjct: 171 TEVDLGKARYWLERAAAKGYDVAIENLARLDARHGSGVKLDKKKAMKLYRAAADRGDAFA 230
Query: 272 QLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
Q + L +E + +AV Y L+ G T + + T D
Sbjct: 231 QGNLAVLLSSEEKFEEAVRYYALSADQGYTPGETFLGMCYSDGKGTEVD 279
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG-----STLAMVDA----GLMYWEMDKKEAAIS 158
G ++ G G +L KA + AA+G LA +DA G+ ++DKK+A +
Sbjct: 162 GYCYRDGDGTEVDLGKARYWLERAAAKGYDVAIENLARLDARHGSGV---KLDKKKA-MK 217
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
LYR AA GD Q NL + EE AV+ ++ G+ + L +C G+G +
Sbjct: 218 LYRAAADRGDAFAQGNLAVLLSSEEKFEEAVRYYALSADQGYTPGETFLGMCYSDGKGTE 277
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+L +A W RAA G A+ N + + + +A +W K AAD G A+
Sbjct: 278 VDLGKARYWLERAAAKGDEHAIENLAHLNARLRLYNQNLEEAFRWFKLAADQGLTGAEFN 337
Query: 275 HGLGLFT 281
G T
Sbjct: 338 TGFSYLT 344
>gi|124004620|ref|ZP_01689464.1| leucine Rich Repeat domain protein [Microscilla marina ATCC 23134]
gi|123989743|gb|EAY29272.1| leucine Rich Repeat domain protein [Microscilla marina ATCC 23134]
Length = 963
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 94/220 (42%), Gaps = 18/220 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EAM+ L W + G GV NL KA F + A G +A LMY
Sbjct: 707 EAMLYLGW--MYYKGLGVAVNLTKATHWFEQSGALGLISGQYNAALMYHHGRGVKVNFSK 764
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCL 207
A+ Y QAA G + NLG Y + V + +A++ G AQ LA L
Sbjct: 765 AVFWYHQAAEQGHASAAANLGWMYADGKGVTINKSLAADYYRKAALKGQQDAQRNLAHLL 824
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GVD N EA WY +AA G A+ N Y G+G + +A K+ AA+ G
Sbjct: 825 RDGDGVDKNEAEAFNWYEKAASKGDASALVNLGWMYQKGKGCRQDYIKALKYYTEAANKG 884
Query: 268 HGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 303
H +AQ G LG T + +A + +LA G A
Sbjct: 885 HSRAQYNTGVMYQLGKGTFRNLSEAFAWYKLAAEQGYANA 924
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 13/179 (7%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG-LMYWEMDKKEAAISLYR 161
+LL GK F + D+A +++ AA G + G + ++ + A+
Sbjct: 643 LLLSQGKSFYK----EEKYDEATICYVQAAALGGYEGLNALGEINLYKKKDYQQALHWCS 698
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA L P LG Y + +A Q+ G + QY AL H GRGV
Sbjct: 699 KAARLQSPEAMLYLGWMYYKGLGVAVNLTKATHWFEQSGALGLISGQYNAALMYHHGRGV 758
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N +A WY +AAE G+ A N Y+ G+G+ ++ A + ++AA G AQ
Sbjct: 759 KVNFSKAVFWYHQAAEQGHASAAANLGWMYADGKGVTINKSLAADYYRKAALKGQQDAQ 817
>gi|395827877|ref|XP_003787118.1| PREDICTED: protein sel-1 homolog 1 [Otolemur garnettii]
Length = 732
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGI 177
+A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG+
Sbjct: 377 RAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGM 436
Query: 178 SYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
+YL V++ Y +A+ G V Q QL + G GV + ++A +++ A++
Sbjct: 437 AYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQ 496
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GG++ A YN + ++ G G+ S A + K + G +L + +G+ AV
Sbjct: 497 GGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDGDYNAAV 556
Query: 290 V-YLELATRAGETAADHVKNVILQQLSAT 317
+ YL LA + E A + IL Q AT
Sbjct: 557 IQYLLLAEQGYEVAQSNAA-FILDQREAT 584
>gi|237748202|ref|ZP_04578682.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379564|gb|EEO29655.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 398
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 12/185 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
++ LL K ++ G+GV++N A ++ A RG A G+MY++
Sbjct: 94 DSHALLGLCKMYEDGKGVKENDRLAFQYCMQAAKRGEVKAQKRLGMMYYKGTGVARNVHE 153
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A + QAA+ DP + LGI+YL+ +A L +A+ GHV A ++L
Sbjct: 154 ARFWFNQAALSDDPEALYYLGIAYLKGIGGEKDFHQAHDLFERAADEGHVNAMWKLYEMF 213
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ G GV + QEA +W ++ A G +RA + Y G G+ +A +W ++AA G
Sbjct: 214 NEGTGVRQDRQEAFKWLMKLAADGDIRAQFLAGSSYLTGNGVKADPAEAVRWFEKAAQQG 273
Query: 268 HGKAQ 272
AQ
Sbjct: 274 SVDAQ 278
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAG 195
G +++ E A+S+Y+Q A GD L Y + VK QA+ G
Sbjct: 70 GDVFYSRGDYENALSVYKQEAKRGDSHALLGLCKMYEDGKGVKENDRLAFQYCMQAAKRG 129
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
V+AQ +L + ++G GV N+ EA W+ +AA A+Y + Y G G Q
Sbjct: 130 EVKAQKRLGMMYYKGTGVARNVHEARFWFNQAALSDDPEALYYLGIAYLKGIGGEKDFHQ 189
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEG 283
A +RAAD GH A + +F EG
Sbjct: 190 AHDLFERAADEGHVNAMWKL-YEMFNEG 216
>gi|336453020|ref|YP_004607486.1| hypothetical protein HBZC1_07880 [Helicobacter bizzozeronii CIII-1]
gi|335333047|emb|CCB79774.1| hypothetical protein HBZC1_07880 [Helicobacter bizzozeronii CIII-1]
Length = 572
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKE 154
++A L G + +G+ K+ KAL+ F + A G A + G +Y E E
Sbjct: 338 QKAQELYNLGVVYSSDQGIAKDEQKALEYFTQAAKLGHAKAYYNLGTIYSEGLGVPKDLE 397
Query: 155 AAISLYRQAAVLGDPAGQFNLGIS---------------YLQEEAVKLLYQASIAGHVRA 199
A S +++AA LGD +NLG+ + EEA KL + A
Sbjct: 398 QAFSCFQEAAKLGDDKAYYNLGLMCEYARGVPQNIPQALFFYEEAAKLE-------NTSA 450
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
+ L H G+ V ++++A ++ +AA+ G +R YN + YS G+G+ +QA +
Sbjct: 451 LHHLGSLYHVGKIVPKDMEKAFAYFYKAAQLGSIRDCYNLGVMYSKGDGVQKDIQQALSY 510
Query: 260 MKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
++AAD G A G+ G E ++ KA+ Y + + + G A
Sbjct: 511 FEKAADLGSSNALYNLGIIYYQGEGVEKDLEKAISYFQRSCKLGNKKA 558
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGIS 178
+AL ++ + A GS+ A+V G+MY + + +A A++ ++QAA LGD G NLG+
Sbjct: 56 EALKNYEQAADLGSSRALVGLGVMYANGRGVSQDDARALNYFQQAANLGDSQGFVNLGVM 115
Query: 179 YLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y + +K YQ ++ V A +AL G+GV N Q+A Y +AA
Sbjct: 116 YNLGKGIKKDYQKALDFFKQGAEFNDVNAINYMALMYRTGKGVGVNYQKALELYEQAANL 175
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
G VR + + + G G+ ++ QA ++ KRAAD G +A + L + EG
Sbjct: 176 GSVRVLVSLGTMHYNGHGVAKNYPQAIEYFKRAADMGDARAY--YNLAIMCEG 226
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 24/204 (11%)
Query: 89 KSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD 142
+ + +AL+ +A L+ G + +GRGV ++ +AL+ F + A G + V+
Sbjct: 52 RDYAEALKNYEQAADLGSSRALVGLGVMYANGRGVSQDDARALNYFQQAANLGDSQGFVN 111
Query: 143 AGLMY--WEMDKKE--AAISLYRQAAVLGDP-----------AGQFNLGISYLQEEAVKL 187
G+MY + KK+ A+ ++Q A D G+ +G++Y ++A++L
Sbjct: 112 LGVMYNLGKGIKKDYQKALDFFKQGAEFNDVNAINYMALMYRTGK-GVGVNY--QKALEL 168
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
QA+ G VR L + G GV N +A ++ RAA+ G RA YN ++ GE
Sbjct: 169 YEQAANLGSVRVLVSLGTMHYNGHGVAKNYPQAIEYFKRAADMGDARAYYNLAIMCEGGE 228
Query: 248 GLPLSHRQARKWMKRAADCGHGKA 271
G+ Q+R++ K +A G KA
Sbjct: 229 GMDKDTEQSREFFKESARLGFTKA 252
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
++ G GV K+LDKA++ + + G A+ +Y E DK AI+ Y++AA
Sbjct: 260 YESGDGVDKDLDKAIELYQEAGNMGDADALASLANLYRVGKGVEQDKY-TAIAYYKEAAD 318
Query: 166 LGDPAGQ------------------FNLGISYL--------QEEAVKLLYQASIAGHVRA 199
LGD +NLG+ Y +++A++ QA+ GH +A
Sbjct: 319 LGDSQALANLNAMSDRGGSQKAQELYNLGVVYSSDQGIAKDEQKALEYFTQAAKLGHAKA 378
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
Y L G GV +L++A + AA+ G +A YN L + G+P + QA +
Sbjct: 379 YYNLGTIYSEGLGVPKDLEQAFSCFQEAAKLGDDKAYYNLGLMCEYARGVPQNIPQALFF 438
Query: 260 MKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAG 299
+ AA + A L H L+ G +M KA Y A + G
Sbjct: 439 YEEAAKLENTSA-LHHLGSLYHVGKIVPKDMEKAFAYFYKAAQLG 482
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ G+GV N KAL+ + + A GS +V G M++ AI +++AA +
Sbjct: 152 YRTGKGVGVNYQKALELYEQAANLGSVRVLVSLGTMHYNGHGVAKNYPQAIEYFKRAADM 211
Query: 167 GDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD +NL G+ E++ + +++ G +A Y LA G GVD +L
Sbjct: 212 GDARAYYNLAIMCEGGEGMDKDTEQSREFFKESARLGFTKATYTLASMYESGDGVDKDLD 271
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+A Y A G A+ + + Y G+G+ A + K AAD G +A
Sbjct: 272 KAIELYQEAGNMGDADALASLANLYRVGKGVEQDKYTAIAYYKEAADLGDSQA 324
>gi|432583904|ref|ZP_19820304.1| hypothetical protein A1SM_03125, partial [Escherichia coli KTE57]
gi|431116554|gb|ELE19997.1| hypothetical protein A1SM_03125, partial [Escherichia coli KTE57]
Length = 514
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 196 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 255
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P Q +L G+ E+A K +++ G+ AQY LA GRGVD
Sbjct: 256 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 315
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 316 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 375
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 376 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 419
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQAAVLGDPAGQFNLGIS 178
K L S+ + A +G+++ D G MY+ E+ KK+ + Y ++A G+ NL +
Sbjct: 175 KKLTSYKRAAQQGNSVFQNDLGAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALM 234
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR-GRGVDFNLQEAARWYLRAAE 229
Y ++A+ L A+ H AQ+ LA C++R G GV+ + ++A +W ++AE
Sbjct: 235 YRDGKGVNKNPQKAISLYLNAANKNHPLAQHSLA-CMYRDGEGVEVDDEQAFKWCQKSAE 293
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GY A Y+ + Y G G+ + ++Q W+ +AD + KA+ G + E+ + +
Sbjct: 294 QGYAEAQYHLATMYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDM 353
Query: 290 VYLELATRAGETAADH 305
+A ++AADH
Sbjct: 354 T---MAINLLKSAADH 366
>gi|350414268|ref|XP_003490261.1| PREDICTED: protein sel-1 homolog 1-like [Bombus impatiens]
Length = 741
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 13/217 (5%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ GRGV + ++AL F A G+ LAM G +Y E E A +++AA
Sbjct: 353 HYQGGRGVPLDHERALQYFQHAADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAA 412
Query: 165 VLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
LG+P GQ LG+ YL +A++ QA+ G V Q QL G GV +
Sbjct: 413 ELGNPVGQSGLGLMYLYGRGVERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGVRRD 472
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A +++ A++ G+V A YN + ++ G G+ S A + +K A+ G QL
Sbjct: 473 YKLANKYFSLASQSGHVLAFYNLAQMHATGTGMMRSCPAAVELLKNVAERGKWSDQLMVA 532
Query: 277 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
+ EG + +A V L G A IL +
Sbjct: 533 HTDYREGRINEAFVNYALLAEMGYEVAQSNAAFILDK 569
>gi|323450600|gb|EGB06480.1| hypothetical protein AURANDRAFT_29118, partial [Aureococcus
anophagefferens]
Length = 874
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
K W A+ LR+ ++ G ++HG GV+ + KA + A RG +A + G++ +
Sbjct: 178 KIWKRAV-ELRDVRAMVFLGSLYEHGSGVKLDKKKAERLYRAAADRGHAVAQFNVGILLF 236
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
+K E A Y +A G AG+ NLG S + + Y+ G V++
Sbjct: 237 SEEKFEEAFRYYALSADQGYTAGENNLGCSISH---LGIAYRCGRYGLVKSD-------- 285
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ AA+ + RA E G V AM + Y G G+ L ++A + + AAD GH
Sbjct: 286 ---------KPAAKIWKRAVELGNVDAMRHLGAMYEHGSGVKLDKKKAERLYRAAADRGH 336
Query: 269 GKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADH 305
AQ G+ L +E + +AV Y LA G T A+
Sbjct: 337 AVAQCNLGIFLDSEKKFEEAVRYFALAADQGYTDAEQ 373
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 9/226 (3%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
+L+ G +++G GV+ + KA + GA RG +A + + K E A + A
Sbjct: 509 MLKLGFLYENGSGVKLDKKKAERLYRMGADRGDAVAQNNVAFLLVSEKKFEEAFRYFVLA 568
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRG-RGVD 214
A G + + NLG+ Y + EEA + A+ G+ A++ L RG G+
Sbjct: 569 ADQGLTSAENNLGMCYRRGEGTEKKFEEAFRYYALAADQGYTDAEHSLGYAYRRGLYGLV 628
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++AA+ Y RA E G V AM N L Y+ G G+ L ++A + + AAD G AQ
Sbjct: 629 ESDKKAAKIYRRAVELGNVDAMNNLGLFYNNGFGVKLDKKKAERLFRTAADRGDAAAQTS 688
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G L TE + +A LA G T + + +Q T D
Sbjct: 689 LGFLLDTEEKHEEAFRCYVLAADQGYTTGELNLGICYEQGEGTEVD 734
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPA 170
G+ ++ KA + + G+ AM + GL Y ++DKK+A L+R AA GD A
Sbjct: 626 GLVESDKKAAKIYRRAVELGNVDAMNNLGLFYNNGFGVKLDKKKAE-RLFRTAADRGDAA 684
Query: 171 GQFNLGI----SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY-- 224
Q +LG EEA + A+ G+ + L +C +G G + +L +A W+
Sbjct: 685 AQTSLGFLLDTEEKHEEAFRCYVLAADQGYTTGELNLGICYEQGEGTEVDLGKARYWFEP 744
Query: 225 ----LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
RA E G V AM Y G G+ L ++A + + AAD G+ AQ G+ L
Sbjct: 745 AKIWKRAVELGSVEAMVFLGELYEHGNGVKLDKKKAERLWRMAADRGNATAQCNLGVLLH 804
Query: 281 TEGEMMKAVVYLELATRAGET 301
+E + +++ Y L+ G T
Sbjct: 805 SEEKFEESLRYYALSADQGYT 825
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 13/196 (6%)
Query: 135 GSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-----EEA 184
G+ AM G MY ++DKK+A LYR AA G Q NLGI +L EEA
Sbjct: 299 GNVDAMRHLGAMYEHGSGVKLDKKKAE-RLYRAAADRGHAVAQCNLGI-FLDSEKKFEEA 356
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS-LCY 243
V+ A+ G+ A+ L C G G + +L +A W+ RAA G+ +A+ + L
Sbjct: 357 VRYFALAADQGYTDAEQNLGCCYMGGEGTEVDLGKARYWFERAAAKGHEKAIQALARLDA 416
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
G G+ L ++A + + AAD G AQ G+ L +E + + Y LA G T A
Sbjct: 417 RTGSGVKLDKKKAERLFRMAADRGDAGAQSNLGILLASEEKFEETFRYFALAADQGWTNA 476
Query: 304 DHVKNVILQQLSATSR 319
++ + + T +
Sbjct: 477 ENNLGICYRDGDGTEK 492
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 100/244 (40%), Gaps = 41/244 (16%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPA 170
G+ K+ KA + + G+ AM G MY E +DKK+A LYR AA G
Sbjct: 33 GLVKSDKKAAKIYRRAVELGNVDAMTFLGDMYDEGLGVKLDKKKAE-ELYRTAADRGHAV 91
Query: 171 GQFNL----GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD------------ 214
Q NL G +EEA + A+ G+ A+ L C G G +
Sbjct: 92 AQCNLAFVLGSQKKKEEAFRYCALAADQGYTFAENNLGCCYRDGAGTELAQLRRHVENEV 151
Query: 215 ---------------FNL----QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
F L ++AA+ + RA E VRAM Y G G+ L ++
Sbjct: 152 PEAITHLGSVYREGLFGLVKSDKKAAKIWKRAVELRDVRAMVFLGSLYEHGSGVKLDKKK 211
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 315
A + + AAD GH AQ G+ LF+E + +A Y L+ G TA ++ + L
Sbjct: 212 AERLYRAAADRGHAVAQFNVGILLFSEEKFEEAFRYYALSADQGYTAGENNLGCSISHLG 271
Query: 316 ATSR 319
R
Sbjct: 272 IAYR 275
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKL 187
F A +G T A + G+ Y + D E A +YR+A LG+ LG Y VKL
Sbjct: 465 FALAADQGWTNAENNLGICYRDGDGTEKAAKIYRRAVELGNVDAMLKLGFLYENGSGVKL 524
Query: 188 -------LYQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
LY+ + G AQ +A L + +EA R+++ AA+ G A N
Sbjct: 525 DKKKAERLYRMGADRGDAVAQNNVAFLLVSEK----KFEEAFRYFVLAADQGLTSAENNL 580
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+CY GEG +A ++ AAD G+ A EH LG
Sbjct: 581 GMCYRRGEGTEKKFEEAFRYYALAADQGYTDA--EHSLG 617
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 73/204 (35%), Gaps = 46/204 (22%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ +G GV+ + KA F A RG A G + +K E A Y AA G
Sbjct: 657 YNNGFGVKLDKKKAERLFRTAADRGDAAAQTSLGFLLDTEEKHEEAFRCYVLAADQGYTT 716
Query: 171 GQFNLGISYLQEEAV--------------KLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
G+ NLGI Y Q E K+ +A G V A L G GV +
Sbjct: 717 GELNLGICYEQGEGTEVDLGKARYWFEPAKIWKRAVELGSVEAMVFLGELYEHGNGVKLD 776
Query: 217 --------------------------------LQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+E+ R+Y +A+ GY N CYS
Sbjct: 777 KKKAERLWRMAADRGNATAQCNLGVLLHSEEKFEESLRYYALSADQGYTPGEINLGGCYS 836
Query: 245 FGEGLPLSHRQARKWMKRAADCGH 268
G+G + +AR +RAA GH
Sbjct: 837 DGQGTEVDLGKARYLFERAAAKGH 860
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSF------LKGAARGSTLAMVDAGLMY-----WEMDKK 153
L G ++ G G +L KA F + GS AMV G +Y ++DKK
Sbjct: 719 LNLGICYEQGEGTEVDLGKARYWFEPAKIWKRAVELGSVEAMVFLGELYEHGNGVKLDKK 778
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK--LLYQASIA--GHVRAQYQLALCLHR 209
+A L+R AA G+ Q NLG+ EE + L Y A A G+ + L C
Sbjct: 779 KAE-RLWRMAADRGNATAQCNLGVLLHSEEKFEESLRYYALSADQGYTPGEINLGGCYSD 837
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
G+G + +L +A + RAA G+ A N
Sbjct: 838 GQGTEVDLGKARYLFERAAAKGHELATRN 866
>gi|323456548|gb|EGB12415.1| hypothetical protein AURANDRAFT_5055, partial [Aureococcus
anophagefferens]
Length = 228
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 89/168 (52%), Gaps = 13/168 (7%)
Query: 128 FLKGAAR-GSTLAMVDAGLMYWEMD--KKE--AAISLYRQAAVLGDPAGQFNLGISYLQE 182
+LK AA G + A+++ G MY + D +K+ A+ LYR AA LG+ Q N+ + ++E
Sbjct: 1 YLKRAAGLGDSDAILELGTMYEDGDGVRKDIRKAMQLYRTAAELGEANAQQNVALLLVKE 60
Query: 183 ------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
EAV A+ G A+Y LA C G GVD +L+EA RWY RAAE G +
Sbjct: 61 GEHNAVEAVHFYKLAAAQGLTEAEYNLATCYEEGTGVDVDLEEAKRWYARAAEKGDTDSE 120
Query: 237 YNTSLCY-SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
LCY G G+ + +AR+W RAA G AQ G L+ EG
Sbjct: 121 VALGLCYDDVGRGVDVDFEEARRWYARAAAKGDPHAQNNLGF-LYQEG 167
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 47/221 (21%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-- 155
L ++ +L G ++ G GVRK++ KA+ + A G A + L+ + + A
Sbjct: 8 LGDSDAILELGTMYEDGDGVRKDIRKAMQLYRTAAELGEANAQQNVALLLVKEGEHNAVE 67
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ Y+ AA G ++NL Y + EEA + +A+ G ++ L LC
Sbjct: 68 AVHFYKLAAAQGLTEAEYNLATCYEEGTGVDVDLEEAKRWYARAAEKGDTDSEVALGLCY 127
Query: 208 -------------------------------------HRGRGVDFNLQEAARWYLRAAEG 230
G GV+ + EA R Y AA
Sbjct: 128 DDVGRGVDVDFEEARRWYARAAAKGDPHAQNNLGFLYQEGNGVEVDFDEAKRLYELAAAQ 187
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
G A N Y+ G G+ + +A++W +RAA G+ +A
Sbjct: 188 GDDFAECNLGDLYADGLGVDVDLEEAKRWYERAASQGNEEA 228
>gi|419798285|ref|ZP_14323700.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|385695080|gb|EIG25651.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 286
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 85 SLVCKSWNDALRPLRE------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
++ S N A R ++E L G + G G ++ ++A F K A +
Sbjct: 33 NISQNSENQAFRLIQEMAKQGDTRSQLDLGTMYAKGIGTTQDYEQAKYWFEKAAHNDNAE 92
Query: 139 AMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGI----------SYLQEE 183
A + G++Y+E D ++A + +AA G+ FNLGI Y+Q
Sbjct: 93 AQFNLGIIYYEGQGTAQDYRQAKF-WWEKAAEQGNAEAAFNLGILHYAGIGIPQDYIQ-- 149
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A ++A+ G AQ+ L L + G GV + + A W+ +AA+ G +A YN + Y
Sbjct: 150 AKTWFHKAADQGEDSAQFYLGLMYYSGEGVGQDYKLAKSWFEKAAKKGNAKAQYNLGIMY 209
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRA 298
+ G+G+ ++ +A+ W K+AA+ G+ AQ G+ L+ G+ +A + E A
Sbjct: 210 AEGQGVTQNYPKAKYWYKKAAEQGNANAQNNLGV-LYENGQGVTQNFTQAKSWFEKAAAQ 268
Query: 299 GETAADHVKNVILQQ 313
G T A H I+QQ
Sbjct: 269 GNTLAQHALEYIVQQ 283
>gi|421596302|ref|ZP_16040153.1| hypothetical protein BCCGELA001_04002, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404271588|gb|EJZ35417.1| hypothetical protein BCCGELA001_04002, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 311
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R AA+ GD + +G+ + + +EA K +A+ AG V A ++L +G G
Sbjct: 87 RTAAMKGDATAAYEIGMRFAEGKGVATNYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLG 146
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + A R+Y +AAE G +AM+N ++ + G G +++ A +W ++AAD G +Q
Sbjct: 147 VKKDADIARRYYTQAAERGNAKAMHNLAVLDADGGGRGANYKSAAQWFRKAADRGVADSQ 206
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
G+ G+ E + ++ + LA G+T A ++ + ++L + S A L + +
Sbjct: 207 FNLGILYARGIGVEQNLAESYKWFSLAAAQGDTDASGKRDDVAKRLDSQSLAAAKLAIQT 266
Query: 329 WRAMP 333
+ A P
Sbjct: 267 FSAEP 271
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A G RF G+GV N D+A + + A G A G +Y
Sbjct: 94 DATAAYEIGMRFAEGKGVATNYDEAAKWYDRAAQAGVVPATFRLGTLY------------ 141
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+ LG+ + A + QA+ G+ +A + LA+ G G N +
Sbjct: 142 ------------EKGLGVKKDADIARRYYTQAAERGNAKAMHNLAVLDADGGGRGANYKS 189
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
AA+W+ +AA+ G + +N + Y+ G G+ + ++ KW AA G A
Sbjct: 190 AAQWFRKAADRGVADSQFNLGILYARGIGVEQNLAESYKWFSLAAAQGDTDA 241
>gi|365920831|ref|ZP_09445140.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
gi|364577294|gb|EHM54575.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
Length = 418
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+G ++ KA + F K AA+G + A G++Y + A Y +A
Sbjct: 187 GTLYADGKGTPQDYGKAREWFEKAAAQGFSEAQHTLGVLYDNGTGVAQDYDQAREWYEKA 246
Query: 164 AVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+NLG+ Y + V +A+ + AQY L L GRGV
Sbjct: 247 AAQGQAESQYNLGLFYDNGQGVPQDSTKAAAWWEKAAEQNYAAAQYSLGLLYENGRGVAQ 306
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A WY +AA G A +N Y+ G+G+ + +AR+W ++AA G +AQ
Sbjct: 307 DYDKAREWYEKAAAQGEASAQFNLGNLYAQGDGIAQDYNKARQWWEKAAIQGEARAQFNL 366
Query: 276 GLGLFTEGE 284
G +++GE
Sbjct: 367 GA-HYSKGE 374
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGISY 179
AL+ +L A G A D G Y E M + +A A ++A + A QFNLG+ Y
Sbjct: 59 ALEKWLTLAEAGDAEAQFDLGTAYSEGKAMPRNDAKAREWLEKSAAQNNAAAQFNLGLLY 118
Query: 180 LQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
+ +A + +A+I G AQ+ L + +GRG+ N ++A WY +AA G
Sbjct: 119 YKGKGTPQDINKAREWFEKAAIQGLSEAQFNLGVFYEKGRGIPQNYEKAREWYEKAAAQG 178
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
A YN Y+ G+G P + +AR+W ++AA G +AQ H LG+
Sbjct: 179 NGFAKYNLGTLYADGKGTPQDYGKAREWFEKAAAQGFSEAQ--HTLGVL 225
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 18/227 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G+G ++++KA + F K A +G + A + G+ Y + E A Y +AA
Sbjct: 118 YYKGKGTPQDINKAREWFEKAAIQGLSEAQFNLGVFYEKGRGIPQNYEKAREWYEKAAAQ 177
Query: 167 GDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ ++NLG Y + Y +A+ G AQ+ L + G GV +
Sbjct: 178 GNGFAKYNLGTLYADGKGTPQDYGKAREWFEKAAAQGFSEAQHTLGVLYDNGTGVAQDYD 237
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AA G + YN L Y G+G+P +A W ++AA+ + AQ GL
Sbjct: 238 QAREWYEKAAAQGQAESQYNLGLFYDNGQGVPQDSTKAAAWWEKAAEQNYAAAQYSLGL- 296
Query: 279 LFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
L+ G + KA + E A GE +A + Q ++D
Sbjct: 297 LYENGRGVAQDYDKAREWYEKAAAQGEASAQFNLGNLYAQGDGIAQD 343
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQA 163
+ +G GV ++ D+A + + K AA+G + + GL Y D + A + + +A
Sbjct: 226 YDNGTGVAQDYDQAREWYEKAAAQGQAESQYNLGLFY---DNGQGVPQDSTKAAAWWEKA 282
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A A Q++LG+ Y V Y +A+ G AQ+ L +G G+
Sbjct: 283 AEQNYAAAQYSLGLLYENGRGVAQDYDKAREWYEKAAAQGEASAQFNLGNLYAQGDGIAQ 342
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ +A +W+ +AA G RA +N YS GEG+P +AR+W ++AA
Sbjct: 343 DYNKARQWWEKAAIQGEARAQFNLGAHYSKGEGVPQDFSKAREWFEKAA 391
>gi|342904365|ref|ZP_08726166.1| TPR repeat, SEL1 subfamily [Haemophilus haemolyticus M21621]
gi|341953605|gb|EGT80109.1| TPR repeat, SEL1 subfamily [Haemophilus haemolyticus M21621]
Length = 255
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 109 KRFKHG--RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYR 161
++F+ G R + A +L A +G+ A + G+MY + D EA + YR
Sbjct: 31 QQFQQGVEAATRGDYQTAFKLWLSLAEQGNAKAQFNLGVMYEVGQGVKQDDFEA-VKWYR 89
Query: 162 QAAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA G QFNLG+ Y Q+ EAVK +A+ G AQ L +GRGV
Sbjct: 90 KAAEQGIVDAQFNLGVMYGVGQGVKQDDFEAVKWYRKAAEQGLANAQNNLGNMYVKGRGV 149
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ EA +W+ +AAE G +A + L Y+ G G+ + ++ KW+K+AA+ G QL
Sbjct: 150 KQDDFEAVKWFRKAAEQGNAQAQESLGLMYANGRGVKQDYAESVKWVKKAAENGSADGQL 209
Query: 274 EHGLGLF 280
+ G F
Sbjct: 210 KLGAAYF 216
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G+GV+++ +A+ + K A +G A + G+MY + D EA + YR+
Sbjct: 68 GVMYEVGQGVKQDDFEAVKWYRKAAEQGIVDAQFNLGVMYGVGQGVKQDDFEA-VKWYRK 126
Query: 163 AAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y++ EAVK +A+ G+ +AQ L L GRGV
Sbjct: 127 AAEQGLANAQNNLGNMYVKGRGVKQDDFEAVKWFRKAAEQGNAQAQESLGLMYANGRGVK 186
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ E+ +W +AAE G Y G+G+ A++W +A D G+
Sbjct: 187 QDYAESVKWVKKAAENGSADGQLKLGAAYFLGQGIQKDKTLAKEWFGKACDNGN 240
>gi|397677034|ref|YP_006518572.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397723|gb|AFN57050.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 315
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EA 155
+A LL G + G+GV KN KA+ K A + A G +Y D E
Sbjct: 126 DAQTLL--GAAYHMGQGVPKNDQKAIFWLQKAADQAFPQAQNFLGEVYETGDPAVRNIEK 183
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
AIS Y++AA Q +LG++Y + E++ +A++ G + Q+ L
Sbjct: 184 AISWYQKAAEGNSVTAQAHLGMAYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFFYGLAC 243
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G GV N +EA W+ +AA+ G ++A L Y+ GEG+P S +A W+K+AA G
Sbjct: 244 LKGEGVAKNPREAVSWFQKAADQGNLQATTRLGLAYASGEGVPASKEKAVFWLKKAAGQG 303
Query: 268 HGKAQ 272
AQ
Sbjct: 304 EPNAQ 308
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKK 153
+A LL G ++ G G+ KN +KA+ + K A +G+ A G Y + D+K
Sbjct: 90 DAETLL--GNAYQQGVGLPKNQEKAIFWYQKAADQGNLDAQTLLGAAYHMGQGVPKNDQK 147
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
AI ++AA P Q LG Y E+A+ +A+ V AQ L +
Sbjct: 148 --AIFWLQKAADQAFPQAQNFLGEVYETGDPAVRNIEKAISWYQKAAEGNSVTAQAHLGM 205
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
H G + N +++ W+ +AA G + + L GEG+ + R+A W ++AAD
Sbjct: 206 AYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFFYGLACLKGEGVAKNPREAVSWFQKAAD 265
Query: 266 CGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHV 306
G+ +A GL + GE + KAV +L+ A GE A +
Sbjct: 266 QGNLQATTRLGLA-YASGEGVPASKEKAVFWLKKAAGQGEPNAQRI 310
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 39/183 (21%)
Query: 131 GAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ 190
G RG TL A ++W ++AA + A L A Q +G+ QE+A+ +
Sbjct: 62 GYFRGKTLPHDYAKGIFW---LQKAADQGHSDAETLLGNAYQQGVGLPKNQEKAIFWYQK 118
Query: 191 ASIAGHVRAQYQLALCLHRGRGV-----------------------DF------------ 215
A+ G++ AQ L H G+GV +F
Sbjct: 119 AADQGNLDAQTLLGAAYHMGQGVPKNDQKAIFWLQKAADQAFPQAQNFLGEVYETGDPAV 178
Query: 216 -NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N+++A WY +AAEG V A + + Y G LP ++ ++ W K+AA G + Q
Sbjct: 179 RNIEKAISWYQKAAEGNSVTAQAHLGMAYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFF 238
Query: 275 HGL 277
+GL
Sbjct: 239 YGL 241
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 180 LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
LQ + L +A+ G+ A+ +++ RG+ + + + W +AA+ G+ A
Sbjct: 36 LQSDYTPALQKAADQGNADAEAKVSFGYFRGKTLPHDYAKGIFWLQKAADQGHSDAETLL 95
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELA 295
Y G GLP + +A W ++AAD G+ AQ G +G KA+ +L+
Sbjct: 96 GNAYQQGVGLPKNQEKAIFWYQKAADQGNLDAQTLLGAAYHMGQGVPKNDQKAIFWLQ-- 153
Query: 296 TRAGETAADHVKNVI 310
+A + A +N +
Sbjct: 154 -KAADQAFPQAQNFL 167
>gi|78777396|ref|YP_393711.1| Sel1 repeat-containing protein [Sulfurimonas denitrificans DSM
1251]
gi|78497936|gb|ABB44476.1| Sel1-like repeat [Sulfurimonas denitrificans DSM 1251]
Length = 303
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 14/221 (6%)
Query: 80 QLRAASLVCKSWNDALRPLRE--AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST 137
QL A K+++ LR ++ + + G + +G GV KN +KA + + + + +G+
Sbjct: 17 QLFADINSTKTFDKYLREAKDGNSSAMFNVGLSYFNGVGVEKNHNKAFEWYNRASDKGNL 76
Query: 138 LAMVDAGLMYWEMDKKEAAISL----YRQAAVLGDPAGQFNLGISYLQ-------EEAVK 186
A+ + G MY D SL Y AA G Q NLG+ + + ++A
Sbjct: 77 EALNNLGTMYDNGDATLQNSSLAQKYYEMAANAGLATAQLNLGLFFEKNPTSENMKKAAS 136
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
+A++ G+ AQ LA + G G+ +NL+ A W+ AA A YN S+ Y
Sbjct: 137 WYEKAALQGNSIAQNNLAKLYYFGNGIGYNLERAFYWFQEAAWQDDPIAQYNLSMMYYKA 196
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
E P + W++R+A G AQ + G +TEG ++K
Sbjct: 197 EHTPYDASKTLFWLERSAKNGSQHAQTKLG-DFYTEGLIVK 236
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQ 172
+N+ KA + K A +G+++A + +Y+ + E A +++AA DP Q
Sbjct: 127 TSENMKKAASWYEKAALQGNSIAQNNLAKLYYFGNGIGYNLERAFYWFQEAAWQDDPIAQ 186
Query: 173 FNLGISYLQEE-----AVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+NL + Y + E A K L+ +++ G AQ +L G V NL+ A WY
Sbjct: 187 YNLSMMYYKAEHTPYDASKTLFWLERSAKNGSQHAQTKLGDFYTEGLIVKKNLEIAFEWY 246
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+RAA Y +A+Y + Y +G G+ + +A++W+++A++ G+ A L
Sbjct: 247 MRAALKNYQKALYQVGVFYFYGHGVNKNSIKAKEWLEKASESGYEDATL 295
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ A + + L G GV+ N +A WY RA++ G + A+ N Y G+ +
Sbjct: 38 GNSSAMFNVGLSYFNGVGVEKNHNKAFEWYNRASDKGNLEALNNLGTMYDNGDATLQNSS 97
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLF-----TEGEMMKAVVYLELATRAGETAADH 305
A+K+ + AA+ G AQL LGLF T M KA + E A G + A +
Sbjct: 98 LAQKYYEMAANAGLATAQL--NLGLFFEKNPTSENMKKAASWYEKAALQGNSIAQN 151
>gi|282891587|ref|ZP_06300078.1| conserved hypothetical protein [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174833|ref|YP_004651643.1| hypothetical protein PUV_08390 [Parachlamydia acanthamoebae UV-7]
gi|281498555|gb|EFB40883.1| conserved hypothetical protein [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479191|emb|CCB85789.1| uncharacterized protein ybeQ [Parachlamydia acanthamoebae UV-7]
Length = 537
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G+ ++ G+GV+K+ +A+ + K A +G +A D G MY W + + + A+ Y+ A
Sbjct: 279 GRLYESGKGVQKDYTEAIRWYQKAADQGLDIAQNDLGRMYQYGWGVPQDFQTALKFYQMA 338
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLHRGRGVDF 215
A G + + N+G+ Y V+ Y+ + + +A QY LAL GRG+
Sbjct: 339 AKNGLGSAETNIGVMYENGIGVQKNYEQAFNWYQKAADHENPEGQYNLALMYENGRGIQP 398
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
NLQ AA++Y AA G A N + Y G+G+ ++A +AA+ GH
Sbjct: 399 NLQTAAQYYQLAASQGSSLAQNNLGVFYLTGKGVEKDLKRAFDLFTQAAESGH 451
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G+ +++G GV ++ AL + A G A + G+MY E A + Y++A
Sbjct: 315 GRMYQYGWGVPQDFQTALKFYQMAAKNGLGSAETNIGVMYENGIGVQKNYEQAFNWYQKA 374
Query: 164 AVLGDPAGQFNLGISYLQEEAVKL-------LYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
A +P GQ+NL + Y ++ YQ A+ G AQ L + G+GV+
Sbjct: 375 ADHENPEGQYNLALMYENGRGIQPNLQTAAQYYQLAASQGSSLAQNNLGVFYLTGKGVEK 434
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+L+ A + +AAE G+ A N Y G G+P + +A W +++A+
Sbjct: 435 DLKRAFDLFTQAAESGHPVAASNLGRLYETGSGVPQDYLKALYWYQKSAE 484
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-MDKKE--AAISLYRQAA 164
G+ +++G GV KNL +A + + + A + + + G Y E ++ K+ A+ +++AA
Sbjct: 172 GRFYENGIGVEKNLTEAFNYYREAADQNNPQGLNAVGRFYLEVLNPKDYNKALEYFQKAA 231
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIA----------GHVRAQYQLALCLHRGRGVD 214
L + NLG+ Y E + S A G+ AQ L G+GV
Sbjct: 232 KLKYVHSENNLGVMY--ENGWGIPSNISAALAAYKQAADQGNPYAQANLGRLYESGKGVQ 289
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ EA RWY +AA+ G A + Y +G G+P + A K+ + AA G G A E
Sbjct: 290 KDYTEAIRWYQKAADQGLDIAQNDLGRMYQYGWGVPQDFQTALKFYQMAAKNGLGSA--E 347
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAADH 305
+G+ E + Y E A + AADH
Sbjct: 348 TNIGVMYENGIGVQKNY-EQAFNWYQKAADH 377
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV+KN ++A + + K A + + LMY + A Y+ A
Sbjct: 351 GVMYENGIGVQKNYEQAFNWYQKAADHENPEGQYNLALMYENGRGIQPNLQTAAQYYQLA 410
Query: 164 AVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG+ YL + V+ L QA+ +GH A L G GV
Sbjct: 411 ASQGSSLAQNNLGVFYLTGKGVEKDLKRAFDLFTQAAESGHPVAASNLGRLYETGSGVPQ 470
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY ++AE +Y Y G G ++ KRAA G+ +AQ E
Sbjct: 471 DYLKALYWYQKSAEQNDPLGLYYLGRLYINGLGTQKKGQEGLDLFKRAARLGNPQAQAE 529
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
G+GV + EA RWY ++A+ G + AM + GEG+P ++ A + AA G+
Sbjct: 70 GKGVPQDYAEAFRWYKKSADRGNLEAMTLLGNMFILGEGVPKNYDTAFQLFSSAAQSGYS 129
Query: 270 KAQ 272
AQ
Sbjct: 130 LAQ 132
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L+ G + +G+GV ++ +A + K A RG+ AM G M+
Sbjct: 61 LQKGALYFYGKGVPQDYAEAFRWYKKSADRGNLEAMTLLGNMF----------------- 103
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+LG+ G+ + A +L A+ +G+ AQ LA G V+ ++ +A Y
Sbjct: 104 ILGE-------GVPKNYDTAFQLFSSAAQSGYSLAQNNLATMYENGWAVEQDIPKALELY 156
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+AAE A N Y G G+ + +A + + AAD
Sbjct: 157 RQAAEQKNPFAQANLGRFYENGIGVEKNLTEAFNYYREAAD 197
>gi|197117516|ref|YP_002137943.1| SEL1 repeat-containing lipoprotein [Geobacter bemidjiensis Bem]
gi|197086876|gb|ACH38147.1| SEL1 repeat-containing protein [Geobacter bemidjiensis Bem]
Length = 272
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ ++ G GV +N +A+ + K A+G+ A + +Y K++ YR+ A G
Sbjct: 94 GQMYRTGDGVEENPAEAVKWYRKAGAQGNQEAQAELERLY--ALKEDVETKWYRRDAERG 151
Query: 168 DPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
Q NLG+ Y + EA +A++ G +AQY L L G G+D + E
Sbjct: 152 MVRAQVNLGLIYYFGRDLGADKREAALWFSKAAVQGDAQAQYYYGLMLSEGDGIDPDAVE 211
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
AR L AA+ G+ A Y S CY G+G+ + +A W+++AA G+ A E
Sbjct: 212 GARLLLSAAKAGHADAQYQISKCYLHGKGVARNADEAVAWLRKAASQGNHNAASE 266
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 133 ARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISY-----LQE- 182
A G A+ + G+MY+ D K A+ +AA LG+ Q +LG Y ++E
Sbjct: 47 ADGGAQALNNIGIMYYRGDGVRQDKAEAVHWLLKAAALGNEDAQVSLGQMYRTGDGVEEN 106
Query: 183 --EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
EAVK +A G+ AQ +L V+ +WY R AE G VRA N
Sbjct: 107 PAEAVKWYRKAGAQGNQEAQAELERLYALKEDVE------TKWYRRDAERGMVRAQVNLG 160
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
L Y FG L R+A W +AA G +AQ +GL + +EG+
Sbjct: 161 LIYYFGRDLGADKREAALWFSKAAVQGDAQAQYYYGL-MLSEGD 203
>gi|294661164|ref|YP_003573039.1| hypothetical protein Aasi_1584 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336314|gb|ACP20911.1| hypothetical protein Aasi_1584 [Candidatus Amoebophilus asiaticus
5a2]
Length = 185
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G+R+++GRGV K+ KA++ + K A +G A G MY + + ++ A Y++A
Sbjct: 3 GQRYENGRGVTKDYVKAVEWYQKAAKQGDAEAQYILGCMYDDGRGVIKDEQKAFKWYQKA 62
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G QFNLG+SY +++AV+ +A+ GHV AQY L + G G+
Sbjct: 63 AGQGYAKAQFNLGVSYANGQGIAEDEKKAVEWYQKAAEQGHVGAQYNLGVIYEGGMGIKQ 122
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
N ++A WY A E G A + + Y G G+ ++A
Sbjct: 123 NYKQAVSWYQAATEKGSPIAQASLARMYFNGWGIKKDIKRA 163
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+AV+ +A+ G AQY L GRGV + Q+A +WY +AA GY +A +N +
Sbjct: 18 KAVEWYQKAAKQGDAEAQYILGCMYDDGRGVIKDEQKAFKWYQKAAGQGYAKAQFNLGVS 77
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM------MKAVVYLELAT 296
Y+ G+G+ ++A +W ++AA+ GH AQ + LG+ EG M +AV + + AT
Sbjct: 78 YANGQGIAEDEKKAVEWYQKAAEQGHVGAQ--YNLGVIYEGGMGIKQNYKQAVSWYQAAT 135
Query: 297 RAGETAA 303
G A
Sbjct: 136 EKGSPIA 142
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + +A WY +AA+ G A Y Y G G+ ++A KW ++AA G
Sbjct: 7 ENGRGVTKDYVKAVEWYQKAAKQGDAEAQYILGCMYDDGRGVIKDEQKAFKWYQKAAGQG 66
Query: 268 HGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQ 312
+ KAQ G+ + G+ + KAV + + A G A + VI +
Sbjct: 67 YAKAQFNLGVS-YANGQGIAEDEKKAVEWYQKAAEQGHVGAQYNLGVIYE 115
>gi|260753384|ref|YP_003226277.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|384411703|ref|YP_005621068.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|258552747|gb|ACV75693.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|335932077|gb|AEH62617.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 315
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EA 155
+A LL G + G+GV KN KA+ K A + A G +Y D E
Sbjct: 126 DAQTLL--GAAYHMGQGVPKNDQKAIFWLQKAADQAFPQAQNFLGEVYETGDPAVRNIEK 183
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
AIS Y++AA Q +LG++Y + E++ +A++ G + Q+ L
Sbjct: 184 AISWYQKAAEGNSVTAQAHLGMAYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFFYGLAC 243
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G GV N +EA W+ +AA+ G ++A L Y+ GEG+P S +A W+K+AA G
Sbjct: 244 LKGEGVAKNPREAVSWFQKAADQGNLQATTRLGLAYASGEGVPASKEKAVFWLKKAAGQG 303
Query: 268 HGKAQ 272
AQ
Sbjct: 304 EPNAQ 308
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKK 153
+A LL G ++ G G+ KN +KA+ + K A +G+ A G Y + D+K
Sbjct: 90 DAETLL--GNAYQQGVGLPKNQEKAIFWYQKAADQGNLDAQTLLGAAYHMGQGVPKNDQK 147
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
AI ++AA P Q LG Y E+A+ +A+ V AQ L +
Sbjct: 148 --AIFWLQKAADQAFPQAQNFLGEVYETGDPAVRNIEKAISWYQKAAEGNSVTAQAHLGM 205
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
H G + N +++ W+ +AA G + + L GEG+ + R+A W ++AAD
Sbjct: 206 AYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFFYGLACLKGEGVAKNPREAVSWFQKAAD 265
Query: 266 CGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHV 306
G+ +A GL + GE + KAV +L+ A GE A +
Sbjct: 266 QGNLQATTRLGLA-YASGEGVPASKEKAVFWLKKAAGQGEPNAQRI 310
>gi|300995889|ref|ZP_07181299.1| Sel1 repeat protein, partial [Escherichia coli MS 200-1]
gi|300304677|gb|EFJ59197.1| Sel1 repeat protein [Escherichia coli MS 200-1]
Length = 475
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 157 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 216
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P Q +L G+ E+A K +++ G+ AQY LA GRGVD
Sbjct: 217 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 276
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 277 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 336
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 337 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 380
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQAAVLGDPAGQFNLGIS 178
K L S+ + A +G+++ D G MY+ E+ KK+ + Y ++A G+ NL +
Sbjct: 136 KKLTSYKRAAQQGNSVFQNDLGAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALM 195
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR-GRGVDFNLQEAARWYLRAAE 229
Y ++A+ L A+ H AQ+ LA C++R G GV+ + ++A +W ++AE
Sbjct: 196 YRDGKGVNKNPQKAISLYLNAANKNHPLAQHSLA-CMYRDGEGVEVDDEQAFKWCQKSAE 254
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GY A Y+ + Y G G+ + ++Q W+ +AD + KA+ G + E+ + +
Sbjct: 255 QGYAEAQYHLATMYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDM 314
Query: 290 VYLELATRAGETAADH 305
+A ++AADH
Sbjct: 315 T---MAINLLKSAADH 327
>gi|261345228|ref|ZP_05972872.1| Sel1 repeat family protein [Providencia rustigianii DSM 4541]
gi|282566924|gb|EFB72459.1| Sel1 repeat family protein [Providencia rustigianii DSM 4541]
Length = 265
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 30/227 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+R+ G+GV ++ A + F+K +G++ A G MY V G
Sbjct: 53 GERYFKGQGVSQDSKTAAEWFIKAGDQGNSDAQFRLGTMY-----------------VNG 95
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ ++A+ +A+ G RA+ +A +G GV +L++AA WY +A
Sbjct: 96 -------FGVRRDYDKAMLWYEEAAKNGDTRAETNMATMYAQGLGVKQDLEKAAYWYRKA 148
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
A+ G V A + YS G G+ L + +A W ++AA +Q G+ +++EG+ +K
Sbjct: 149 AQSGNVIAQFKIGQMYSIGSGVALDNEKAVFWFRKAAKQRDANSQDRLGV-MYSEGKGVK 207
Query: 288 -----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
A +L A +G + ++ I +QLSA +A + D++
Sbjct: 208 KNLQQAYAWLSTAVYSGNKESQRLQKKIAEQLSADELKQAQKLADNY 254
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G + +G GVR++ DKA+ + + A G T A + MY +
Sbjct: 86 FRLGTMYVNGFGVRRDYDKAMLWYEEAAKNGDTRAETNMATMYAQ--------------- 130
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
LG+ E+A +A+ +G+V AQ+++ G GV + ++A W+
Sbjct: 131 ---------GLGVKQDLEKAAYWYRKAAQSGNVIAQFKIGQMYSIGSGVALDNEKAVFWF 181
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+AA+ + + YS G+G+ + +QA W+ A G+ ++Q
Sbjct: 182 RKAAKQRDANSQDRLGVMYSEGKGVKKNLQQAYAWLSTAVYSGNKESQ 229
>gi|303391317|ref|XP_003073888.1| Sel1 repeat-containing protein [Encephalitozoon intestinalis ATCC
50506]
gi|303303037|gb|ADM12528.1| Sel1 repeat-containing protein [Encephalitozoon intestinalis ATCC
50506]
Length = 588
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G F G GV +N + A++ F + + + A+ + G Y E + A +YR +
Sbjct: 174 GYCFLKGFGVERNEEIAVELFRYASEKKDSTALYNIGFCYEEGKGVVRNLVKAFEMYRLS 233
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A + + Q LG Y + +A + ++++ G+ Q LA C +G G+
Sbjct: 234 AKMENSYAQNALGNCYEEGKGVNKDLHKAFEFYKKSALQGYPSGQCNLAFCYQKGIGIKK 293
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA---- 271
+LQ+A WY RAA G RA +N CY G G P +A W K +A + +
Sbjct: 294 DLQKAFEWYKRAAAQGLSRAKHNIGYCYQNGLGTPPCMSKAVHWYKESASENNKYSIHAL 353
Query: 272 --QLEHGLGL----------FTEGEMM---KAVVYLELATRAG 299
+HG G+ F EG M +A++ L L R+G
Sbjct: 354 GVCYQHGYGVPKDERLAVRYFGEGAKMGFDEAIISLALCYRSG 396
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 14/187 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV K+L KA + + K A +G + Y + + A Y++A
Sbjct: 246 GNCYEEGKGVNKDLHKAFEFYKKSALQGYPSGQCNLAFCYQKGIGIKKDLQKAFEWYKRA 305
Query: 164 AVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G + N+G Y +AV +++ + + + L +C G GV
Sbjct: 306 AAQGLSRAKHNIGYCYQNGLGTPPCMSKAVHWYKESASENNKYSIHALGVCYQHGYGVPK 365
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ + A R++ A+ G+ A+ + +LCY G G+ +S ++ +KRAA + AQ +
Sbjct: 366 DERLAVRYFGEGAKMGFDEAIISLALCYRSGTGVRVSPEKSFGLIKRAAKMNNSSAQ--N 423
Query: 276 GLGLFTE 282
LG + E
Sbjct: 424 TLGYYYE 430
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ G GVR + +K+ + A ++ A G Y E + KEA I Y +A
Sbjct: 393 YRSGTGVRVSPEKSFGLIKRAAKMNNSSAQNTLGYYYEEGYGTPKNIKEA-IKWYGMSAK 451
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+ FNL Y +E ++LL ++ G+ +A L +G GV+ N
Sbjct: 452 QDNSWALFNLSNLYFNRSRSSTDKEVGMRLLIKSRDLGNPKAMDTLGYYFEKGIGVEKNP 511
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
A Y +A +GGY++A YN CY G G + +A + +A+ G
Sbjct: 512 MLAFEHYNQALQGGYLKAGYNLGRCYESGIGTEIDLDKALYYFYKASSAG 561
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 18/169 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-------MDKKEAAISLYRQA 163
++ G G++K+L KA + + + AA+G + A + G Y M K A+ Y+++
Sbjct: 285 YQKGIGIKKDLQKAFEWYKRAAAQGLSRAKHNIGYCYQNGLGTPPCMSK---AVHWYKES 341
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A + LG+ Y + AV+ + + G A LALC G GV
Sbjct: 342 ASENNKYSIHALGVCYQHGYGVPKDERLAVRYFGEGAKMGFDEAIISLALCYRSGTGVRV 401
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ +++ RAA+ A Y G G P + ++A KW +A
Sbjct: 402 SPEKSFGLIKRAAKMNNSSAQNTLGYYYEEGYGTPKNIKEAIKWYGMSA 450
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 27/163 (16%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKKEA------------ 155
G G ++ KA + K A + LA++ + W +D++EA
Sbjct: 57 GIGTAVDMKKAEMRYSKAALSDNGLALIRLAFIRWFGRPTATIDREEAKKILDKLKRLGR 116
Query: 156 -AISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALC 206
++ A G+P ++ LG+ Y + AVK + + ++ + L C
Sbjct: 117 KSVEWLFYANKYGNPYAKYCLGVCYQEGYGVPIDPLLAVKYYSEGAYEANICSIGILGYC 176
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+G GV+ N + A + A+E A+YN CY G+G+
Sbjct: 177 FLKGFGVERNEEIAVELFRYASEKKDSTALYNIGFCYEEGKGV 219
>gi|384260353|ref|YP_005415537.1| TPR repeat SEL1 subfamily [Rhodospirillum photometricum DSM 122]
gi|378401451|emb|CCG06567.1| TPR repeat SEL1 subfamily [Rhodospirillum photometricum DSM 122]
Length = 262
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------A 191
M AG+ Y D+KE A + AA GDP Q ++G SY + V Y A
Sbjct: 45 MAGAGVAY---DEKEGAKWI-EMAAGQGDPKAQLSIGASYAEGRGVNQNYHRALDWFRRA 100
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
+ G A Y + + G G+ + +A WYL AA+ G V A + Y+ GEG+
Sbjct: 101 ADQGEPDAHYNIGMLRSLGLGLPRDPVDAINWYLIAADRGSVLAQFRLGTLYATGEGVSQ 160
Query: 252 SHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 303
+ +A +W ++AA+ GH AQ+ G GL TE +A+ +L A ++GE AA
Sbjct: 161 DYTKAVEWSRKAAERGHEGAQINLGRFLMQGLGTEKNFPEALHWLSSAAQSGEKAA 216
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQ 202
D EAA + YRQAA G Q LG ++Y ++E K + A+ G +AQ
Sbjct: 17 DXFEAA-NWYRQAAEYGHREAQLLLGRMYMAGAGVAYDEKEGAKWIEMAAGQGDPKAQLS 75
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ GRGV+ N A W+ RAA+ G A YN + S G GLP A W
Sbjct: 76 IGASYAEGRGVNQNYHRALDWFRRAADQGEPDAHYNIGMLRSLGLGLPRDPVDAINWYLI 135
Query: 263 AADCGHGKAQLEHGLGLFTEGEMM-----KAVVYL-ELATRAGETAADHVKNVILQQLS 315
AAD G AQ G L+ GE + KAV + + A R E A ++ ++Q L
Sbjct: 136 AADRGSVLAQFRLGT-LYATGEGVSQDYTKAVEWSRKAAERGHEGAQINLGRFLMQGLG 193
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 93/232 (40%), Gaps = 15/232 (6%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKE 154
REA +LL G+ + G GV + + A +G A + G Y E
Sbjct: 34 REAQLLL--GRMYMAGAGVAYDEKEGAKWIEMAAGQGDPKAQLSIGASYAEGRGVNQNYH 91
Query: 155 AAISLYRQAAVLGDPAGQFN--------LGISYLQEEAVKLLYQASIAGHVRAQYQLALC 206
A+ +R+AA G+P +N LG+ +A+ A+ G V AQ++L
Sbjct: 92 RALDWFRRAADQGEPDAHYNIGMLRSLGLGLPRDPVDAINWYLIAADRGSVLAQFRLGTL 151
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G GV + +A W +AAE G+ A N G G + +A W+ AA
Sbjct: 152 YATGEGVSQDYTKAVEWSRKAAERGHEGAQINLGRFLMQGLGTEKNFPEALHWLSSAAQS 211
Query: 267 GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATS 318
G A G G+ + ++ RA T D IL+QL+A S
Sbjct: 212 GEKAAMTALGEFYSHWGDEKNIPLAVDWLGRAA-TLGDERAQEILEQLAAQS 262
>gi|157962656|ref|YP_001502690.1| Sel1 domain-containing protein [Shewanella pealeana ATCC 700345]
gi|157847656|gb|ABV88155.1| Sel1 domain protein repeat-containing protein [Shewanella pealeana
ATCC 700345]
Length = 380
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 15/219 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMD---KKEAAISLYRQA 163
G + +G G+ +N +A+ + K A +G A G +Y + +D ++ A+ Y A
Sbjct: 85 GTIYDYGMGIPENRQEAIKWYRKAAEQGVADAQYTLGTIYDYGIDVSENRQEALDWYYLA 144
Query: 164 AVLGDPAGQFNLGISYLQE-----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
A + +G+ + EA+ + +A+ G AQY LA L+ G G + N Q
Sbjct: 145 AEQNHVDALYAIGMIFHSTKEDYPEAIYWIKKAADKGLDEAQYDLARMLYFGVGTEENKQ 204
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-- 276
+A WYL+AAE G+V A + Y F +G+ + A W ++AA+ G+ KAQ G
Sbjct: 205 QAFIWYLKAAEQGHVAAQFYVGSAYDFAQGVAENKTNAFVWYQKAANEGYAKAQFHLGSM 264
Query: 277 --LGLFTEGEMMKAV-VYLELATRAGETAADHVKNVILQ 312
LG T KA+ YL+ A + G A H V+ +
Sbjct: 265 YELGEGTTVNKAKAIRCYLKAAEQ-GLPDAQHNLGVMFE 302
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%)
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A++L +A+ G AQY L G V N QEA +WY +AAE G A Y Y
Sbjct: 29 AIELHRKAAEQGVADAQYTLETIYDYGINVPVNRQEAIKWYRKAAEQGVADAQYTLGTIY 88
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+G G+P + ++A KW ++AA+ G AQ G
Sbjct: 89 DYGMGIPENRQEAIKWYRKAAEQGVADAQYTLG 121
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCL 207
AI L+R+AA G Q+ L Y ++EA+K +A+ G AQY L
Sbjct: 29 AIELHRKAAEQGVADAQYTLETIYDYGINVPVNRQEAIKWYRKAAEQGVADAQYTLGTIY 88
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G+ N QEA +WY +AAE G A Y Y +G + + ++A W AA+
Sbjct: 89 DYGMGIPENRQEAIKWYRKAAEQGVADAQYTLGTIYDYGIDVSENRQEALDWYYLAAEQN 148
Query: 268 HGKAQLEHGLGLFTEGEMMKAVVY 291
H A G+ + E +Y
Sbjct: 149 HVDALYAIGMIFHSTKEDYPEAIY 172
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVLGDP 169
G G +N +A +LK A +G A G Y + K A Y++AA G
Sbjct: 196 GVGTEENKQQAFIWYLKAAEQGHVAAQFYVGSAYDFAQGVAENKTNAFVWYQKAANEGYA 255
Query: 170 AGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
QF+LG Y E A++ +A+ G AQ+ L + G GV N+ EA
Sbjct: 256 KAQFHLGSMYELGEGTTVNKAKAIRCYLKAAEQGLPDAQHNLGVMFELGDGVVKNMPEAI 315
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WY AA+ G + Y Y + P + A W + AA GH KA
Sbjct: 316 TWYTAAAKQGNAESQYVLGTIYESDKSEPQNLHIADMWYQGAAALGHQKA 365
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 23/179 (12%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM---DKKEAAISLYRQAAVLGDPAGQF 173
++K DK LD AR ++Y+ + + K+ A Y +AA G A QF
Sbjct: 174 IKKAADKGLDEAQYDLAR----------MLYFGVGTEENKQQAFIWYLKAAEQGHVAAQF 223
Query: 174 NLGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
+G +Y + V + YQ A+ G+ +AQ+ L G G N +A R YL
Sbjct: 224 YVGSAYDFAQGVAENKTNAFVWYQKAANEGYAKAQFHLGSMYELGEGTTVNKAKAIRCYL 283
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+AAE G A +N + + G+G+ + +A W AA G+ ++Q + LG E +
Sbjct: 284 KAAEQGLPDAQHNLGVMFELGDGVVKNMPEAITWYTAAAKQGNAESQ--YVLGTIYESD 340
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G + +GV +N A + K A G A G MY E+ + K AI Y +
Sbjct: 226 GSAYDFAQGVAENKTNAFVWYQKAANEGYAKAQFHLGSMY-ELGEGTTVNKAKAIRCYLK 284
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G P Q NLG+ + EA+ A+ G+ +QY L +
Sbjct: 285 AAEQGLPDAQHNLGVMFELGDGVVKNMPEAITWYTAAAKQGNAESQYVLGTIYESDKSEP 344
Query: 215 FNLQEAARWYLRAAEGGYVRAM 236
NL A WY AA G+ +A+
Sbjct: 345 QNLHIADMWYQGAAALGHQKAL 366
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L C+ R + + A + +AAE G A Y Y +G +P++ ++A KW ++
Sbjct: 12 LGGCVSSDRSSERSPDFAIELHRKAAEQGVADAQYTLETIYDYGINVPVNRQEAIKWYRK 71
Query: 263 AADCGHGKAQ------LEHGLGL 279
AA+ G AQ ++G+G+
Sbjct: 72 AAEQGVADAQYTLGTIYDYGMGI 94
>gi|264677901|ref|YP_003277808.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
gi|262208414|gb|ACY32512.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
Length = 445
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK--EAAISLYRQ 162
GK + +G+GV KN D AL A + GL+Y E KK EA ++ Q
Sbjct: 44 GKAYLYGKGVEKNADDALRWLRLAAEHNHAPSQYLLGLVYVLGAEGVKKDPEAGLTHIHQ 103
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ Q LG YL+ EAV+ L +A+ G AQ L +G +
Sbjct: 104 AANAGNLDAQNLLGTIYLKGEAVEKDAATGVAWLERAAQQGSATAQNSLGFVYRKGELLA 163
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+LQ + RWYL AA+ V A + + Y GEG+ +H +A KW+ AD G KAQL
Sbjct: 164 QDLQASFRWYLMAAQQADVLAQFTVAEMYYLGEGVEKNHAEAAKWLTPLADKGVQKAQL 222
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 163 AAVLGDPAGQFNLGI-SYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+A+ G+ Q+N+G+ YL + EA K A+ G+ +AQY L G GV
Sbjct: 321 SALKGNVLAQYNVGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGEGV 380
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+L +A +WY AAE A Y Y G G+ + +QAR+W++RAA+ GH A+
Sbjct: 381 GKSLAQALKWYRLAAEQQDAPAQYALGTLYRDGLGVKKNAKQAREWLQRAAEQGHAPAK 439
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMD 151
+ +++A +LL GK G+GV + +A+ A RGS A + G ++ E
Sbjct: 215 KGVQKAQLLL--GKICFEGQGVAPDYKRAVLLLHAVAIRGSGEAYYELGRLFEQGEGEYR 272
Query: 152 KKEAAISLYRQA---------------AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGH 196
++ AI+ Y QA + + +F + Y++ +++ G+
Sbjct: 273 NEKEAIAYYTQALKYQHAAAAQRLEQISASSPKSAEFAQSMEYMEN------LNSALKGN 326
Query: 197 VRAQYQLALCLHRGRG-VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
V AQY + + + G+G N EAA+W+ AA GY +A YN Y GEG+ S Q
Sbjct: 327 VLAQYNVGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGEGVGKSLAQ 386
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEG 283
A KW + AA+ AQ G L+ +G
Sbjct: 387 ALKWYRLAAEQQDAPAQYALGT-LYRDG 413
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 87 VCKSWNDALRPLREAMVLLRWGKRFKHG-------RGVRKNLDKALDSFLKGAARGSTLA 139
V K+ +DALR LR A ++ G GV+K+ + L + A G+ A
Sbjct: 53 VEKNADDALRWLRLAAEHNHAPSQYLLGLVYVLGAEGVKKDPEAGLTHIHQAANAGNLDA 112
Query: 140 MVDAGLMYW--EMDKKEAA--ISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI-- 193
G +Y E +K+AA ++ +AA G Q +LG Y + E + QAS
Sbjct: 113 QNLLGTIYLKGEAVEKDAATGVAWLERAAQQGSATAQNSLGFVYRKGELLAQDLQASFRW 172
Query: 194 ------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA-MYNTSLCYSFG 246
V AQ+ +A + G GV+ N EAA+W A+ G +A + +C+ G
Sbjct: 173 YLMAAQQADVLAQFTVAEMYYLGEGVEKNHAEAAKWLTPLADKGVQKAQLLLGKICFE-G 231
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGET 301
+G+ +++A + A G G+A E G LF +GE +A+ Y A +
Sbjct: 232 QGVAPDYKRAVLLLHAVAIRGSGEAYYELGR-LFEQGEGEYRNEKEAIAYYTQALKYQHA 290
Query: 302 AADHVKNVILQQLSATSRDRA 322
AA L+Q+SA+S A
Sbjct: 291 AAAQR----LEQISASSPKSA 307
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG- 246
+ A+ G+V AQY+L G+GV+ N +A RW AAE + + Y L Y G
Sbjct: 28 MVNAAKTGNVAAQYELGKAYLYGKGVEKNADDALRWLRLAAEHNHAPSQYLLGLVYVLGA 87
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGET 301
EG+ + +AA+ G+ AQ G ++ +GE ++ V +LE A + G
Sbjct: 88 EGVKKDPEAGLTHIHQAANAGNLDAQNLLGT-IYLKGEAVEKDAATGVAWLERAAQQGSA 146
Query: 302 AADH 305
A +
Sbjct: 147 TAQN 150
>gi|56551033|ref|YP_161872.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542607|gb|AAV88761.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 418
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 114/235 (48%), Gaps = 18/235 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQ 162
G + G+GV + +KA + K A +G+T A G Y++ D ++AA+ +++
Sbjct: 90 GSAYYQGKGVPQGYEKAALWWQKAAGQGNTAAQYVLGSAYYQGKGIPRDYEKAAL-WWQK 148
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA GD A Q++LG +Y Q V Y +A+ GH AQY L ++G GV
Sbjct: 149 AAGQGDAAAQYDLGNAYYQGAGVPRDYAKALSWYQKAADQGHAAAQYDLGSAYYQGAGVP 208
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
++A W+ +AA+ GY A +N Y G G+P + +A W ++AAD G+ AQ
Sbjct: 209 QGYEKAVFWWQKAADQGYAAAQFNLGNAYYQGAGVPQDYAKAVFWYQKAADQGYADAQFN 268
Query: 275 HGLGLFTE----GEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
G E + KAV + + A G+ AA + V + + +DRA V
Sbjct: 269 LGDAYHDEEGVPQDYAKAVFWYQKAADQGDAAAQNNLGVAYARGAGVPQDRAKAV 323
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + G+GV+++ +KA + K A +G A D G Y++ E A +++A
Sbjct: 54 GGAYYQGKGVQRDYEKAAFWYQKAADQGKAEAQYDLGSAYYQGKGVPQGYEKAALWWQKA 113
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A G+ A Q+ LG +Y Q + + Y+ + G AQY L ++G GV
Sbjct: 114 AGQGNTAAQYVLGSAYYQGKGIPRDYEKAALWWQKAAGQGDAAAQYDLGNAYYQGAGVPR 173
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A WY +AA+ G+ A Y+ Y G G+P + +A W ++AAD G+ AQ
Sbjct: 174 DYAKALSWYQKAADQGHAAAQYDLGSAYYQGAGVPQGYEKAVFWWQKAADQGYAAAQFNL 233
Query: 276 GLGLFTEG----EMMKAVVYLELATRAG 299
G + + KAV + + A G
Sbjct: 234 GNAYYQGAGVPQDYAKAVFWYQKAADQG 261
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 17/226 (7%)
Query: 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKAL 125
+D+ N +P+ A +L SW A G + G GV + +KA+
Sbjct: 159 YDLGNAYYQGAGVPRDYAKAL---SWYQKAADQGHAAAQYDLGSAYYQGAGVPQGYEKAV 215
Query: 126 DSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQAAVLGDPAGQFNLGISYLQ 181
+ K A +G A + G Y++ A+ Y++AA G QFNLG +Y
Sbjct: 216 FWWQKAADQGYAAAQFNLGNAYYQGAGVPQDYAKAVFWYQKAADQGYADAQFNLGDAYHD 275
Query: 182 EEAVKLLYQASIAGHVRAQY--------QLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
EE V Y ++ + +A L + RG GV + +A WY +AA+ G
Sbjct: 276 EEGVPQDYAKAVFWYQKAADQGDAAAQNNLGVAYARGAGVPQDRAKAVFWYQKAADQGDA 335
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A Y Y G G+P SH +A W ++AAD G A E+ LG+
Sbjct: 336 NAQYALGNAYYQGAGVPQSHEKAVFWWQKAADQGFVAA--EYNLGV 379
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQY L ++G+GV + ++AA WY +AA+ G A Y+ Y G+G+P +
Sbjct: 45 GDADAQYALGGAYYQGKGVQRDYEKAAFWYQKAADQGKAEAQYDLGSAYYQGKGVPQGYE 104
Query: 255 QARKWMKRAADCGHGKAQL 273
+A W ++AA G+ AQ
Sbjct: 105 KAALWWQKAAGQGNTAAQY 123
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCL 207
AI ++ A GD Q+ LG +Y Q + V+ Y+ A+ G AQY L
Sbjct: 34 AIIELQEKAETGDADAQYALGGAYYQGKGVQRDYEKAAFWYQKAADQGKAEAQYDLGSAY 93
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
++G+GV ++AA W+ +AA G A Y Y G+G+P + +A W ++
Sbjct: 94 YQGKGVPQGYEKAALWWQKAAGQGNTAAQYVLGSAYYQGKGIPRDYEKAALWWQK 148
>gi|407068627|ref|ZP_11099465.1| hypothetical protein VcycZ_03657 [Vibrio cyclitrophicus ZF14]
Length = 529
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+++G+G + + A K A+ G T+ G Y E D + A L + A
Sbjct: 214 YENGQGTNIDKESAFYWMSKAASSGWTVPTASLGRYYLYGIGTEKDT-DKAFKLLSKVAN 272
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNL 217
A +NL Y VK YQ AS + + + Y +A ++G G D NL
Sbjct: 273 ENKYAA-YNLAGMYFNGNGVKQDYQKSFDWYSIASKSDNAASDYFIAQHYYKGLGRDKNL 331
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A +WYL+AAE G V A + S GEG+P S R+A KW ++AA+ G AQ G+
Sbjct: 332 TQAYKWYLQAAEKGDVDAQFRLGWMLSDGEGVPASSRKAFKWYQKAAEQGSVSAQNNLGV 391
Query: 278 ----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
G TE + +A + E + R G A + V+ +
Sbjct: 392 MYDQGRGTEKDRYQAFKWYEKSARQGNDVAQNNLGVMYEN 431
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVL 166
+ +G GV+++ K+ D + + + + Y++ DK A Y QAA
Sbjct: 285 YFNGNGVKQDYQKSFDWYSIASKSDNAASDYFIAQHYYKGLGRDKNLTQAYKWYLQAAEK 344
Query: 167 GDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD QF LG + +A K +A+ G V AQ L + +GRG + +
Sbjct: 345 GDVDAQFRLGWMLSDGEGVPASSRKAFKWYQKAAEQGSVSAQNNLGVMYDQGRGTEKDRY 404
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+A +WY ++A G A N + Y G G+ S++ A W ++A H +AQ
Sbjct: 405 QAFKWYEKSARQGNDVAQNNLGVMYENGTGVRKSNQLAAFWYAKSAQQNHKEAQ 458
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAA 164
+ + G G KNL +A +L+ A +G A G M + + A A Y++AA
Sbjct: 319 QHYYKGLGRDKNLTQAYKWYLQAAEKGDVDAQFRLGWMLSDGEGVPASSRKAFKWYQKAA 378
Query: 165 VLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
G + Q NLG+ Y Q +A K +++ G+ AQ L + G GV +
Sbjct: 379 EQGSVSAQNNLGVMYDQGRGTEKDRYQAFKWYEKSARQGNDVAQNNLGVMYENGTGVRKS 438
Query: 217 LQEAARWYLRAAEGGYVRAMYNTS 240
Q AA WY ++A+ + A N S
Sbjct: 439 NQLAAFWYAKSAQQNHKEAQSNLS 462
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 35/79 (44%)
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
Y+ + + + + L G GV + +A WY ++A+ G + N + Y G+G
Sbjct: 160 YEQCVDSYTYCSFYMGLAFDNGHGVPQDYNKAIHWYSKSAKDGNRDSARNLAWLYENGQG 219
Query: 249 LPLSHRQARKWMKRAADCG 267
+ A WM +AA G
Sbjct: 220 TNIDKESAFYWMSKAASSG 238
>gi|326791575|ref|YP_004309396.1| Sel1 domain-containing protein repeat-containing protein
[Clostridium lentocellum DSM 5427]
gi|326542339|gb|ADZ84198.1| Sel1 domain protein repeat-containing protein [Clostridium
lentocellum DSM 5427]
Length = 350
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EA 155
EAM++L G + G+G+ K+ + A + K A GS AM G MY+E ++K E
Sbjct: 174 EAMLVL--GNIYYMGQGILKDDETAFKWYTKAADLGSAAAMNYMGNMYYEGKGIEKNLEK 231
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHR 209
AI Y +AA G FN+G Y + +E ++ +A+ G + A +A H
Sbjct: 232 AILFYEKAACQGHYTAMFNMGYIYYEAHMKGWDEPFEVYLKAAFEGDIEAINHVAYSYHT 291
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
G + N +EA +WY AA AM + Y G+G P + +A W ++A
Sbjct: 292 GSDTEQNYEEAFKWYQIAAAKDQPSAMIWLAYLYLNGQGAPKDYLKASYWCEKA 345
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 18/176 (10%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAIS 158
+L + +G GV++N +A+ + K AA G AM+ G +Y+ + E A
Sbjct: 139 TILHKAHSYYNGEGVQRNSKEAVKWYEKAAAMGHVEAMLVLGNIYYMGQGILKDDETAFK 198
Query: 159 LYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRG 210
Y +AA LG A +G Y + E+A+ +A+ GH A + + +
Sbjct: 199 WYTKAADLGSAAAMNYMGNMYYEGKGIEKNLEKAILFYEKAACQGHYTAMFNMGYIYYEA 258
Query: 211 --RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G D E YL+AA G + A+ + + Y G ++ +A KW + AA
Sbjct: 259 HMKGWD----EPFEVYLKAAFEGDIEAINHVAYSYHTGSDTEQNYEEAFKWYQIAA 310
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ G GV N +EA +WY +AA G+V AM Y G+G+ A KW +AAD G
Sbjct: 148 YNGEGVQRNSKEAVKWYEKAAAMGHVEAMLVLGNIYYMGQGILKDDETAFKWYTKAADLG 207
Query: 268 HGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAA 303
A G ++ EG+ + KA+++ E A G A
Sbjct: 208 SAAAMNYMG-NMYYEGKGIEKNLEKAILFYEKAACQGHYTA 247
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ +EAVK +A+ GHV A L + G+G+ + + A +WY +AA+ G A
Sbjct: 152 GVQRNSKEAVKWYEKAAAMGHVEAMLVLGNIYYMGQGILKDDETAFKWYTKAADLGSAAA 211
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM----KAVVY 291
M Y G+G+ + +A + ++AA GH A G ++ E M VY
Sbjct: 212 MNYMGNMYYEGKGIEKNLEKAILFYEKAACQGHYTAMFNMGY-IYYEAHMKGWDEPFEVY 270
Query: 292 LELATRAGETAADHV 306
L+ A A +HV
Sbjct: 271 LKAAFEGDIEAINHV 285
>gi|237748075|ref|ZP_04578555.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379437|gb|EEO29528.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQA 163
G + G GV K+ +KA F K A +G A GLMY + ++S R A
Sbjct: 108 GMLYSQGLGVAKDFEKAKYWFDKAAGQGFAPAQTLVGLMYAKGVGTAKSMSQAEKWLRLA 167
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+P Q LG+ YL EA +LL +A++ G AQ L + G+GVD
Sbjct: 168 AKQGEPDAQTYLGLLYLDGTELPQDVGEAARLLKEAAVKGDPNAQSALGMMYFSGKGVDQ 227
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
++ E+ +W +AA G V A Y G G+ +AR W+++AA G AQ
Sbjct: 228 DMNESEKWLEKAAIAGNVDAQTFLGNLYYKGIGVAKDDTRARYWLQKAAIAGDPDAQ 284
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
++A L + + G+ +AQ L + G G+ N A RWY ++A+ A +
Sbjct: 50 KKAAPFLMKEAKKGNAKAQVCLGMMYQEGLGLKQNYMLARRWYEKSAKKNRADAQTFLGM 109
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 297
YS G G+ +A+ W +AA G AQ GL G+ T M +A +L LA +
Sbjct: 110 LYSQGLGVAKDFEKAKYWFDKAAGQGFAPAQTLVGLMYAKGVGTAKSMSQAEKWLRLAAK 169
Query: 298 AGETAA 303
GE A
Sbjct: 170 QGEPDA 175
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 146 MYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHV 197
+Y+ K+AA L ++A G+ Q LG+ Y + +K Y +++
Sbjct: 43 LYYNQQYKKAAPFLMKEAKK-GNAKAQVCLGMMYQEGLGLKQNYMLARRWYEKSAKKNRA 101
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQ L + +G GV + ++A W+ +AA G+ A L Y+ G G S QA
Sbjct: 102 DAQTFLGMLYSQGLGVAKDFEKAKYWFDKAAGQGFAPAQTLVGLMYAKGVGTAKSMSQAE 161
Query: 258 KWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETA 302
KW++ AA G AQ GL L+ +G EL GE A
Sbjct: 162 KWLRLAAKQGEPDAQTYLGL-LYLDGT--------ELPQDVGEAA 197
>gi|150396795|ref|YP_001327262.1| Sel1 domain-containing protein [Sinorhizobium medicae WSM419]
gi|150028310|gb|ABR60427.1| Sel1 domain protein repeat-containing protein [Sinorhizobium
medicae WSM419]
Length = 380
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L G ++HGRGV + +A + + A G A GLMY+ K E + QAA
Sbjct: 121 LNLGVMYEHGRGVAPDPAEAARWYGRAAEHGDAQAQHRLGLMYF---KGEGVKRDHVQAA 177
Query: 165 VL-------GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR 209
G+P+ QF+LG YLQ EA +L A GH AQY L L
Sbjct: 178 RWYRAAAAQGNPSAQFHLGSMYLQGQGVPKEPSEAFRLFRGAGGLGHENAQYNLGLMYLN 237
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
G GV +L E+ RW+ AAE YN +L Y+ G G+ + +A + AA G
Sbjct: 238 GIGVQKDLDESVRWFRAAAEQKSALGQYNLALMYANGTGVAKNSEEAARLTSLAAHQGLA 297
Query: 270 KAQLEHGLGL 279
AQ H LG+
Sbjct: 298 MAQ--HNLGI 305
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G+GV K +A F G A + GLMY + D E+ + +R
Sbjct: 196 GSMYLQGQGVPKEPSEAFRLFRGAGGLGHENAQYNLGLMYLNGIGVQKDLDES-VRWFRA 254
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GQ+NL + Y EEA +L A+ G AQ+ L + G GV+
Sbjct: 255 AAEQKSALGQYNLALMYANGTGVAKNSEEAARLTSLAAHQGLAMAQHNLGIAYISGAGVE 314
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ A W+ +AA+ G+ RA +N ++ Y+ GEG+ + A +WM++AA+
Sbjct: 315 KDSAAAVHWFQKAAQQGHARAQFNLAMMYARGEGVARNDALAFEWMQKAAN 365
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI---------AGHVRAQYQLALCLHRG 210
YR+AA G Q NLG Y E V Y + A+ L + G
Sbjct: 71 YRKAAEQGHVKAQVNLGGLYFDGEGVAQDYAEAARWFRKAAEDGAAALAELNLGVMYEHG 130
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
RGV + EAARWY RAAE G +A + L Y GEG+ H QA +W + AA G+
Sbjct: 131 RGVAPDPAEAARWYGRAAEHGDAQAQHRLGLMYFKGEGVKRDHVQAARWYRAAAAQGNPS 190
Query: 271 AQLEHGLGLFTEGE 284
AQ G ++ +G+
Sbjct: 191 AQFHLG-SMYLQGQ 203
>gi|300023957|ref|YP_003756568.1| Sel1 domain-containing protein repeat-containing protein
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525778|gb|ADJ24247.1| Sel1 domain protein repeat-containing protein [Hyphomicrobium
denitrificans ATCC 51888]
Length = 362
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
EA G+ + G GV+KN KA D ++K A G A L E D+K
Sbjct: 109 EAQANTLIGRIYGEGLGVQKNERKAYDYYMKAAQLGDVQGSFAAALALAEGRGVKKDRKV 168
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALC 206
AA L+ +AA+ G+ +NLG+ +L+ + A + + A+ G AQY LA
Sbjct: 169 AA-ELFEKAALTGNAEANYNLGMLFLKGDGKPQSPIRAFQHIRYAAEKGVPEAQYDLAEL 227
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G G + N EAARW RAAE G A Y+ ++ G GL + MK AAD
Sbjct: 228 YQTGTGTEANALEAARWLSRAAEQGLTPAQYDYAVKLLQGFGLSKDESKIAVLMKAAADK 287
Query: 267 GHGKAQ 272
G AQ
Sbjct: 288 GVPGAQ 293
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 130 KGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQAAVLGDPAGQFNLGISYLQEEAV 185
+ A RG A G +Y E + K E A Y +AA LGD G F ++ + V
Sbjct: 103 EAAQRGEAQANTLIGRIYGEGLGVQKNERKAYDYYMKAAQLGDVQGSFAAALALAEGRGV 162
Query: 186 K--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
K L +A++ G+ A Y L + +G G + A + AAE G A Y
Sbjct: 163 KKDRKVAAELFEKAALTGNAEANYNLGMLFLKGDGKPQSPIRAFQHIRYAAEKGVPEAQY 222
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+ + Y G G + +A +W+ RAA+ G AQ ++ + L
Sbjct: 223 DLAELYQTGTGTEANALEAARWLSRAAEQGLTPAQYDYAVKLL 265
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A+KL +A+ G +A + G GV N ++A +Y++AA+ G V+ + +L
Sbjct: 97 ALKLAEEAAQRGEAQANTLIGRIYGEGLGVQKNERKAYDYYMKAAQLGDVQGSFAAALAL 156
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+ G G+ + A + ++AA G+ +A G+ LF +G+
Sbjct: 157 AEGRGVKKDRKVAAELFEKAALTGNAEANYNLGM-LFLKGD 196
>gi|437248003|ref|ZP_20714969.1| hypothetical protein SEEE1831_22808, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|435168778|gb|ELN54605.1| hypothetical protein SEEE1831_22808, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
Length = 343
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 18/221 (8%)
Query: 57 EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG 116
+G DF+ +F L + +A W L ++ G + +G G
Sbjct: 71 QGSDFSYFILGYHYNYGENFPLSRQKALE-----WYRKAAELGDSSTQEILGDAYMYGDG 125
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQ 172
+N AL+ + + AA+G A G+M+ + + + A++ YR+AA G PA Q
Sbjct: 126 FPQNTQLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQ 185
Query: 173 FNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+LGI + +A+ +A+ +AQYQL + GRGV N + A +WY
Sbjct: 186 THLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWY 245
Query: 225 LRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
L+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 246 LKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 286
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 81 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRRA 140
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G Q +G+ ++Q E V YQ ++A G AQ L + GRGV
Sbjct: 141 AAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQ 200
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G AQL
Sbjct: 201 SDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQGFTPAQLAL 260
Query: 276 GLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVILQ 312
G ++ G + +A ++ +A+ E + D +I +
Sbjct: 261 GE-IYAHGRQGVPKDNKQAYIWYYMASIYTEKSKDDCSALIAE 302
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 45 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 104
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A LGD + Q LG +Y+ + A++ +A+ G AQ + + +G GV
Sbjct: 105 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQ 164
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 165 DYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQL 224
Query: 276 GLGLFT 281
G+ T
Sbjct: 225 GVAYST 230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 14/155 (9%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 31 QKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 90
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
L Q+A WY +AAE G Y +G+G P + + A +W +RAA G +AQ
Sbjct: 91 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRRAAAQGLAEAQD 150
Query: 274 EHGLGLFTEGE-----MMKAVVYLELATRAGETAA 303
G+ +F +GE +A+ + A R G AA
Sbjct: 151 AIGV-MFMQGEGVSQDYQQALAWYRKAARQGLPAA 184
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 26 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 85
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRA---GE 300
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE RA G
Sbjct: 86 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRRAAAQGL 145
Query: 301 TAADHVKNVILQQLSATSRD 320
A V+ Q S+D
Sbjct: 146 AEAQDAIGVMFMQGEGVSQD 165
>gi|433207860|ref|ZP_20391543.1| hypothetical protein WI1_01626, partial [Escherichia coli KTE97]
gi|431730872|gb|ELJ94431.1| hypothetical protein WI1_01626, partial [Escherichia coli KTE97]
Length = 480
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 164 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 223
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 224 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 283
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 284 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 335
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ Y + A+ G+ A Y L + G V +L+ A W+ RAA+ + A
Sbjct: 136 GLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDA 195
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+Y + YS G G + +ARKW AA G+ AQ E
Sbjct: 196 LYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYE 234
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 242 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 301
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLG-DPAGQ--FNLGISYLQE-------- 182
A +Y + +E A+ + +AA G D AG + LG YL
Sbjct: 302 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 361
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA + L A+ G + A + LA + L+ + + + A WY +AA G A + T+
Sbjct: 362 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALHWYEKAARLGATEAQHQTAA 421
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 422 MYAQGTGTKIDNKQAWMWLTIAGN 445
>gi|432713475|ref|ZP_19948516.1| hypothetical protein WCI_01840 [Escherichia coli KTE8]
gi|431257278|gb|ELF50202.1| hypothetical protein WCI_01840 [Escherichia coli KTE8]
Length = 649
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 18/224 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 331 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 390
Query: 164 AVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P Q +L Y E V K +++ G+ AQY LA GRGVD
Sbjct: 391 ANKNHPLAQHSLACMYRDGEGVEVDDGQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 451 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 510
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 511 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 554
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQAAVLGDPAGQFNLGIS 178
K L S+ + A +G+++ D G MY+ E+ KK+ + Y ++A G+ NL +
Sbjct: 310 KKLTSYKRAAQQGNSVFQNDLGAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALM 369
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHR-GRGVDFNLQEAARWYLRAAE 229
Y ++A+ L A+ H AQ+ LA C++R G GV+ + +A +W ++AE
Sbjct: 370 YRDGKGVNKNPQKAISLYLNAANKNHPLAQHSLA-CMYRDGEGVEVDDGQAFKWCQKSAE 428
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 289
GY A Y+ + Y G G+ + ++Q W+ +AD + KA+ G + E+ + +
Sbjct: 429 QGYAEAQYHLATMYIDGRGVDVDYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDM 488
Query: 290 VYLELATRAGETAADH 305
+A ++AADH
Sbjct: 489 T---MAINLLKSAADH 501
>gi|421358796|ref|ZP_15809093.1| hypothetical protein SEEE3139_12155 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421362764|ref|ZP_15813016.1| hypothetical protein SEEE0166_09112 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421367966|ref|ZP_15818159.1| hypothetical protein SEEE0631_12331 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421387807|ref|ZP_15837806.1| hypothetical protein SEEE6622_21043 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421391911|ref|ZP_15841877.1| hypothetical protein SEEE6670_18996 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421394886|ref|ZP_15844825.1| hypothetical protein SEEE6426_11197 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421403249|ref|ZP_15853103.1| hypothetical protein SEEE7246_08361 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421425856|ref|ZP_15875490.1| hypothetical protein SEEE5101_08578 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421433483|ref|ZP_15883043.1| hypothetical protein SEEE5518_00947 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421441178|ref|ZP_15890648.1| hypothetical protein SEEE1618_16969 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|436811250|ref|ZP_20530130.1| hypothetical protein SEEE1882_20062 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436815624|ref|ZP_20533175.1| hypothetical protein SEEE1884_12578 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436846951|ref|ZP_20539583.1| hypothetical protein SEEE1594_22300 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436851213|ref|ZP_20541812.1| hypothetical protein SEEE1566_10588 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436857978|ref|ZP_20546498.1| hypothetical protein SEEE1580_11685 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436865154|ref|ZP_20551121.1| hypothetical protein SEEE1543_12485 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436875673|ref|ZP_20557580.1| hypothetical protein SEEE1441_22716 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436883203|ref|ZP_20561632.1| hypothetical protein SEEE1810_20559 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436887936|ref|ZP_20564265.1| hypothetical protein SEEE1558_10994 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436896275|ref|ZP_20569031.1| hypothetical protein SEEE1018_12147 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436906253|ref|ZP_20575099.1| hypothetical protein SEEE1010_20306 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436911799|ref|ZP_20577628.1| hypothetical protein SEEE1729_10470 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436920036|ref|ZP_20582775.1| hypothetical protein SEEE0895_13655 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436930343|ref|ZP_20588568.1| hypothetical protein SEEE0899_20031 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436935751|ref|ZP_20591191.1| hypothetical protein SEEE1457_10511 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436942940|ref|ZP_20595886.1| hypothetical protein SEEE1747_11677 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436951567|ref|ZP_20600622.1| hypothetical protein SEEE0968_12729 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436964725|ref|ZP_20606361.1| hypothetical protein SEEE1444_18941 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436971300|ref|ZP_20609693.1| hypothetical protein SEEE1445_12921 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436985369|ref|ZP_20614889.1| hypothetical protein SEEE1559_16657 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436991662|ref|ZP_20617673.1| hypothetical protein SEEE1565_07860 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437012123|ref|ZP_20624636.1| hypothetical protein SEEE1808_20573 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437020907|ref|ZP_20627718.1| hypothetical protein SEEE1811_13214 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437029802|ref|ZP_20630984.1| hypothetical protein SEEE0956_06831 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437042559|ref|ZP_20636150.1| hypothetical protein SEEE1455_10136 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437052277|ref|ZP_20641700.1| hypothetical protein SEEE1575_15591 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437058271|ref|ZP_20645118.1| hypothetical protein SEEE1725_10304 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437069250|ref|ZP_20651205.1| hypothetical protein SEEE1745_18316 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437075961|ref|ZP_20654324.1| hypothetical protein SEEE1791_11197 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437086478|ref|ZP_20660487.1| hypothetical protein SEEE1795_19797 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437095549|ref|ZP_20664653.1| hypothetical protein SEEE6709_18262 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437117626|ref|ZP_20670069.1| hypothetical protein SEEE9058_22759 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437123720|ref|ZP_20673086.1| hypothetical protein SEEE0816_15282 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437134682|ref|ZP_20679106.1| hypothetical protein SEEE0819_22919 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437146934|ref|ZP_20686486.1| hypothetical protein SEEE3089_14441 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437167217|ref|ZP_20698535.1| hypothetical protein SEEEN202_07122 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437265924|ref|ZP_20720739.1| hypothetical protein SEEEL909_02688 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437282154|ref|ZP_20729155.1| hypothetical protein SEEEL913_22561 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437308258|ref|ZP_20735299.1| hypothetical protein SEEE7015_08262 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437424589|ref|ZP_20755253.1| hypothetical protein SEEE2217_18397 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437462423|ref|ZP_20762574.1| hypothetical protein SEEE6211_09499 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437478353|ref|ZP_20767366.1| hypothetical protein SEEE4441_10999 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437487488|ref|ZP_20769900.1| hypothetical protein SEEE4647_00956 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437503696|ref|ZP_20774861.1| hypothetical protein SEEE9845_03593 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437557102|ref|ZP_20785063.1| hypothetical protein SEEE0116_09594 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437581089|ref|ZP_20792235.1| hypothetical protein SEEE1117_23006 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437584789|ref|ZP_20792847.1| hypothetical protein SEEE1392_03164 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437624665|ref|ZP_20805301.1| hypothetical protein SEEE0316_20891 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437641806|ref|ZP_20807998.1| hypothetical protein SEEE0436_11640 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437660158|ref|ZP_20812395.1| hypothetical protein SEEE1319_10307 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437680855|ref|ZP_20818426.1| hypothetical protein SEEE4481_18368 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437695535|ref|ZP_20822176.1| hypothetical protein SEEE6297_13709 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437726703|ref|ZP_20830186.1| hypothetical protein SEEE1616_08346 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|395986486|gb|EJH95650.1| hypothetical protein SEEE0631_12331 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395987236|gb|EJH96399.1| hypothetical protein SEEE3139_12155 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395990588|gb|EJH99719.1| hypothetical protein SEEE0166_09112 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|396008632|gb|EJI17566.1| hypothetical protein SEEE6622_21043 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396010874|gb|EJI19786.1| hypothetical protein SEEE6670_18996 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396013623|gb|EJI22510.1| hypothetical protein SEEE6426_11197 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396030280|gb|EJI39015.1| hypothetical protein SEEE7246_08361 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396055709|gb|EJI64186.1| hypothetical protein SEEE5101_08578 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396061887|gb|EJI70303.1| hypothetical protein SEEE5518_00947 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396064781|gb|EJI73164.1| hypothetical protein SEEE1618_16969 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|434963881|gb|ELL56903.1| hypothetical protein SEEE1882_20062 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434973740|gb|ELL66128.1| hypothetical protein SEEE1884_12578 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434977115|gb|ELL69264.1| hypothetical protein SEEE1594_22300 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434986515|gb|ELL78166.1| hypothetical protein SEEE1566_10588 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434990130|gb|ELL81680.1| hypothetical protein SEEE1580_11685 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434995264|gb|ELL86581.1| hypothetical protein SEEE1441_22716 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|434996189|gb|ELL87505.1| hypothetical protein SEEE1543_12485 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435001648|gb|ELL92737.1| hypothetical protein SEEE1810_20559 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435009646|gb|ELM00432.1| hypothetical protein SEEE1558_10994 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435014830|gb|ELM05387.1| hypothetical protein SEEE1010_20306 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435016164|gb|ELM06690.1| hypothetical protein SEEE1018_12147 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435026044|gb|ELM16175.1| hypothetical protein SEEE1729_10470 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435028101|gb|ELM18181.1| hypothetical protein SEEE0895_13655 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435031998|gb|ELM21942.1| hypothetical protein SEEE0899_20031 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435038589|gb|ELM28370.1| hypothetical protein SEEE1457_10511 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435043139|gb|ELM32856.1| hypothetical protein SEEE1747_11677 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435048582|gb|ELM38147.1| hypothetical protein SEEE1444_18941 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435052034|gb|ELM41536.1| hypothetical protein SEEE0968_12729 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435057589|gb|ELM46958.1| hypothetical protein SEEE1445_12921 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435062209|gb|ELM51391.1| hypothetical protein SEEE1559_16657 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435063443|gb|ELM52591.1| hypothetical protein SEEE1808_20573 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435068239|gb|ELM57268.1| hypothetical protein SEEE1565_07860 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435079535|gb|ELM68246.1| hypothetical protein SEEE1811_13214 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435082836|gb|ELM71447.1| hypothetical protein SEEE0956_06831 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435084484|gb|ELM73070.1| hypothetical protein SEEE1455_10136 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435090877|gb|ELM79278.1| hypothetical protein SEEE1575_15591 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435092668|gb|ELM81023.1| hypothetical protein SEEE1745_18316 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435094084|gb|ELM82423.1| hypothetical protein SEEE1725_10304 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435102624|gb|ELM90727.1| hypothetical protein SEEE1795_19797 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435105258|gb|ELM93295.1| hypothetical protein SEEE1791_11197 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435109926|gb|ELM97872.1| hypothetical protein SEEE6709_18262 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435113064|gb|ELN00922.1| hypothetical protein SEEE9058_22759 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435120161|gb|ELN07763.1| hypothetical protein SEEE0819_22919 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435120959|gb|ELN08519.1| hypothetical protein SEEE0816_15282 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435134564|gb|ELN21690.1| hypothetical protein SEEE3089_14441 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435151839|gb|ELN38478.1| hypothetical protein SEEEN202_07122 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435168772|gb|ELN54604.1| hypothetical protein SEEEL913_22561 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435177288|gb|ELN62620.1| hypothetical protein SEEEL909_02688 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435185853|gb|ELN70709.1| hypothetical protein SEEE7015_08262 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435200154|gb|ELN84167.1| hypothetical protein SEEE2217_18397 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435219089|gb|ELO01452.1| hypothetical protein SEEE6211_09499 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435221172|gb|ELO03445.1| hypothetical protein SEEE4441_10999 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435232896|gb|ELO13973.1| hypothetical protein SEEE4647_00956 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435236815|gb|ELO17531.1| hypothetical protein SEEE9845_03593 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435240403|gb|ELO20807.1| hypothetical protein SEEE1117_23006 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435241208|gb|ELO21574.1| hypothetical protein SEEE0116_09594 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435253859|gb|ELO33280.1| hypothetical protein SEEE0316_20891 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435262332|gb|ELO41444.1| hypothetical protein SEEE1392_03164 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435269354|gb|ELO47898.1| hypothetical protein SEEE1319_10307 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435271171|gb|ELO49642.1| hypothetical protein SEEE4481_18368 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435275895|gb|ELO53938.1| hypothetical protein SEEE0436_11640 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435277811|gb|ELO55743.1| hypothetical protein SEEE6297_13709 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435291634|gb|ELO68446.1| hypothetical protein SEEE1616_08346 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
Length = 356
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRRA 153
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G Q +G+ ++Q E V YQ ++A G AQ L + GRGV
Sbjct: 154 AAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQ 213
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G AQL
Sbjct: 214 SDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQGFTPAQLAL 273
Query: 276 G 276
G
Sbjct: 274 G 274
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 18/221 (8%)
Query: 57 EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG 116
+G DF+ +F L + +A W L ++ G + +G G
Sbjct: 84 QGSDFSYFILGYHYNYGENFPLSRQKALE-----WYRKAAELGDSSTQEILGDAYMYGDG 138
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQ 172
+N AL+ + + AA+G A G+M+ + + + A++ YR+AA G PA Q
Sbjct: 139 FPQNTQLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQ 198
Query: 173 FNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+LGI + +A+ +A+ +AQYQL + GRGV N + A +WY
Sbjct: 199 THLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWY 258
Query: 225 LRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
L+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 259 LKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 299
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A LGD + Q LG +Y+ + A++ +A+ G AQ + + +G GV
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQ 177
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 178 DYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQL 237
Query: 276 GLGLFT 281
G+ T
Sbjct: 238 GVAYST 243
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 14/155 (9%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
L Q+A WY +AAE G Y +G+G P + + A +W +RAA G +AQ
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRRAAAQGLAEAQD 163
Query: 274 EHGLGLFTEGE-----MMKAVVYLELATRAGETAA 303
G+ +F +GE +A+ + A R G AA
Sbjct: 164 AIGV-MFMQGEGVSQDYQQALAWYRKAARQGLPAA 197
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRA---GE 300
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE RA G
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRRAAAQGL 158
Query: 301 TAADHVKNVILQQLSATSRD 320
A V+ Q S+D
Sbjct: 159 AEAQDAIGVMFMQGEGVSQD 178
>gi|421881396|ref|ZP_16312731.1| hypothetical protein HBZS_111760 [Helicobacter bizzozeronii CCUG
35545]
gi|375316389|emb|CCF80727.1| hypothetical protein HBZS_111760 [Helicobacter bizzozeronii CCUG
35545]
Length = 439
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 14/173 (8%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGIS 178
+AL ++ + A GS+ A+V G+MY + + +A A++ ++QAA LGD G NLG+
Sbjct: 56 EALKNYEQAADLGSSRALVGLGVMYANGRGVSQDDARALNYFQQAANLGDSQGFVNLGVM 115
Query: 179 YLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y + +K YQ ++ V A +AL G+GV N Q+A Y +AA
Sbjct: 116 YNLGKGIKKDYQKALDFFKQGAEFNDVNAINYMALMYRTGKGVGVNYQKALELYEQAANL 175
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
G VRA+ + + G G+ ++ QA ++ KRAAD G +A + L + EG
Sbjct: 176 GSVRALVSLGTMHYNGHGVAKNYPQAIEYFKRAADMGDARAY--YNLAIMCEG 226
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 24/205 (11%)
Query: 88 CKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
+ + +AL+ +A L+ G + +GRGV ++ +AL+ F + A G + V
Sbjct: 51 SRDYAEALKNYEQAADLGSSRALVGLGVMYANGRGVSQDDARALNYFQQAANLGDSQGFV 110
Query: 142 DAGLMY--WEMDKKE--AAISLYRQAAVLGDP-----------AGQFNLGISYLQEEAVK 186
+ G+MY + KK+ A+ ++Q A D G+ +G++Y ++A++
Sbjct: 111 NLGVMYNLGKGIKKDYQKALDFFKQGAEFNDVNAINYMALMYRTGK-GVGVNY--QKALE 167
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
L QA+ G VRA L + G GV N +A ++ RAA+ G RA YN ++ G
Sbjct: 168 LYEQAANLGSVRALVSLGTMHYNGHGVAKNYPQAIEYFKRAADMGDARAYYNLAIMCEGG 227
Query: 247 EGLPLSHRQARKWMKRAADCGHGKA 271
EG+ Q+R++ K +A G KA
Sbjct: 228 EGMDKDTEQSREFFKESAKLGFTKA 252
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ G+GV N KAL+ + + A GS A+V G M++ AI +++AA +
Sbjct: 152 YRTGKGVGVNYQKALELYEQAANLGSVRALVSLGTMHYNGHGVAKNYPQAIEYFKRAADM 211
Query: 167 GDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD +NL G+ E++ + +++ G +A Y LA G GVD +L
Sbjct: 212 GDARAYYNLAIMCEGGEGMDKDTEQSREFFKESAKLGFTKATYTLASMYESGDGVDKDLD 271
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+A Y A G A+ + + Y G+G+ A + K AAD G +A
Sbjct: 272 KAIELYQEAGNMGDADALASLANLYRVGKGVEQDKYTAIAYYKEAADLGDSQA 324
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 22/179 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
++ G GV K+LDKA++ + + G A+ +Y E DK AI+ Y++AA
Sbjct: 260 YESGDGVDKDLDKAIELYQEAGNMGDADALASLANLYRVGKGVEQDKY-TAIAYYKEAAD 318
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQ--YQLALCLHRGRGVDFNLQEAARW 223
LGD NL + G +AQ Y L + +G+ + Q+A +
Sbjct: 319 LGDSQALANLNA------------MSDRGGSQKAQELYNLGVVYSSDQGIAKDEQKALEY 366
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
+ +AA+ G+ +A YN YS G G+P QA + AA G KA + LGL E
Sbjct: 367 FTQAAKLGHAKAYYNLGTIYSEGLGVPKDLEQAFSCFQEAAKLGDDKAY--YNLGLMCE 423
>gi|345322950|ref|XP_001505693.2| PREDICTED: protein sel-1 homolog 1, partial [Ornithorhynchus
anatinus]
Length = 415
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 14/217 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
F H + +A D F A G++ AM G MY E E A+ +++AA
Sbjct: 8 FFHHKNNEAQNKRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAAD 67
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+G+P GQ LG++YL + A+K +A+ G V Q QL + G GV +
Sbjct: 68 MGNPVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDY 127
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++A +++ A++GG++ A YN + ++ G G+ S A + K + G +L
Sbjct: 128 KQALKYFNLASQGGHILAFYNLAQMHATGTGVMRSCPTAVELFKNVCERGRWSERLMSAY 187
Query: 278 GLFTEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 313
+ +G+ AVV YL LA + E A + ++ Q+
Sbjct: 188 SSYKDGDSNAAVVQYLLLAEQGYEVAQSNAAFILDQK 224
>gi|340362624|ref|ZP_08684996.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|339887146|gb|EGQ76732.1| TPR repeat protein [Neisseria macacae ATCC 33926]
Length = 286
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 85 SLVCKSWNDALRPLRE------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
++ S N A R ++E L G + G G ++ ++A F K A +
Sbjct: 33 NISQNSENQAFRLIQEMAKQGDTRSQLDLGTMYAKGIGTTQDYEQAKYWFEKAAHNDNAE 92
Query: 139 AMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGI----------SYLQEE 183
A + G++Y+E D ++A + +AA G+ FNLGI Y+Q
Sbjct: 93 AQFNLGIIYYEGQGTAQDYRQAKF-WWEKAAEQGNAEAAFNLGIIHYAGIGVPQDYIQ-- 149
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A ++A+ G AQ+ L L + G GV + + A W+ +AA+ G +A YN + Y
Sbjct: 150 AKTWFHKAADQGEDSAQFYLGLMYYSGEGVVQDYKLAKSWFEKAAKKGNAKAQYNLGIMY 209
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRA 298
+ G+G+ ++ +A+ W K+AA+ G+ AQ G+ L+ G+ +A + E A
Sbjct: 210 AEGQGVTQNYPKAKYWYKKAAEQGNANAQNNLGV-LYENGQGVTQNFTQAKSWFEKAAAQ 268
Query: 299 GETAADHVKNVILQQ 313
G T A H I+QQ
Sbjct: 269 GNTLAQHALEYIVQQ 283
>gi|168333753|ref|ZP_02692003.1| Sel1-like repeat [Epulopiscium sp. 'N.t. morphotype B']
Length = 1016
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
E ++ + +AA G Q+ LG+ Y + +A +A+ GH AQY LA+
Sbjct: 694 EKSVEWFEKAANAGYALAQYQLGLCYKKGLGTKKNATKAFSYFLKAAEQGHALAQYHLAM 753
Query: 206 CL------------HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
C H G G +LQ A WY +AA V A Y CY G G+
Sbjct: 754 CYIKSDGVEKDLKWHYGDGAKRDLQNALTWYQKAANQNVVEAQYQLGCCYKKGLGVETDI 813
Query: 254 RQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 303
+A +W ++AA +G+AQL G + EG ++ AV Y E A + A
Sbjct: 814 VKALEWFEKAAAMNYGEAQLVIG-NCYAEGTGVPKSLLTAVEYWEKAAKQDSVEA 867
Score = 71.2 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 23/170 (13%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-------EEAVKLLYQASIAGHVRAQY 201
E K I R A D Q+ LG+ Y E++V+ +A+ AG+ AQY
Sbjct: 654 EATSKTTEIEELRFMAEENDIESQYQLGLWYTAIGPTQDLEKSVEWFEKAANAGYALAQY 713
Query: 202 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY------------SFGEGL 249
QL LC +G G N +A ++L+AAE G+ A Y+ ++CY +G+G
Sbjct: 714 QLGLCYKKGLGTKKNATKAFSYFLKAAEQGHALAQYHLAMCYIKSDGVEKDLKWHYGDGA 773
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELA 295
+ A W ++AA+ +AQ + G GL E +++KA+ + E A
Sbjct: 774 KRDLQNALTWYQKAANQNVVEAQYQLGCCYKKGLGVETDIVKALEWFEKA 823
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQAAVL 166
+K G GV ++ KAL+ F K AA A + G Y E A+ + +AA
Sbjct: 803 YKKGLGVETDIVKALEWFEKAAAMNYGEAQLVIGNCYAEGTGVPKSLLTAVEYWEKAAKQ 862
Query: 167 GDPAGQFNLGISYLQE---------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
F LG Y AV+L A+ AQY++ALC GRGV+ +L
Sbjct: 863 DSVEAMFILGECYXMGWYGIEKNLFRAVELWEAAAAKRFAPAQYRMALCYKEGRGVERDL 922
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+++ + Y +AA GGYV A Y ++ + R+A KW ++AA+ HG++
Sbjct: 923 KQSMKLYEKAASGGYVNAQYELAVMFEKKRDF----RKAAKWYEKAANXXHGES 972
Score = 68.6 bits (166), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY 160
A+ + G +K G G +KN KA FLK A +G LA + Y + D E + +
Sbjct: 709 ALAQYQLGLCYKKGLGTKKNATKAFSYFLKAAEQGHALAQYHLAMCYIKSDGVEKDLKWH 768
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
GD G + A+ +A+ V AQYQL C +G GV+ ++ +A
Sbjct: 769 -----YGD-------GAKRDLQNALTWYQKAANQNVVEAQYQLGCCYKKGLGVETDIVKA 816
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
W+ +AA Y A CY+ G G+P S A ++ ++AA
Sbjct: 817 LEWFEKAAAMNYGEAQLVIGNCYAEGTGVPKSLLTAVEYWEKAA 860
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 17/179 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKE--AAISLYRQ 162
G + G GV K+L A++ + K A + S AM G Y W +K A+ L+
Sbjct: 836 GNCYAEGTGVPKSLLTAVEYWEKAAKQDSVEAMFILGECYXMGWYGIEKNLFRAVELWEA 895
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA Q+ + + Y + ++++KL +A+ G+V AQY+LA+ + R
Sbjct: 896 AAAKRFAPAQYRMALCYKEGRGVERDLKQSMKLYEKAASGGYVNAQYELAVMFEKKR--- 952
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ ++AA+WY +AA + +MY ++ Y G+G+ ++A + K+AAD + AQ
Sbjct: 953 -DFRKAAKWYEKAANXXHGESMYRLAVFYDDGKGVKKDVKKAMELYKKAADLKNSAAQF 1010
>gi|264676919|ref|YP_003276825.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
gi|262207431|gb|ACY31529.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
Length = 542
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G +N AL + K A +G A+ + G +Y E A+ +R+A
Sbjct: 337 GTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRA 396
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD + QFNL G + +A+K A+ GH AQ +L + G+G
Sbjct: 397 ADKGDASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAAR 456
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ +A +WY RAAE G A YN + Y+ G+G+P + +A W AA
Sbjct: 457 DYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVPRDNARAYFWYNLAA 505
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 18/232 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKEA---AISLYRQA 163
G+ + G GV ++ A F K A + + G +Y + + +++ A +++A
Sbjct: 265 GRMYMDGVGVPRDYKLAASWFQKSAEQWNADGQNHLGRLYLYGLGVEQSPAYAAQWFQRA 324
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A Q+NLG Y + A++ +A+ GH A + GRGV
Sbjct: 325 ADQNHADAQYNLGTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQ 384
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N A +W+ RAA+ G A +N + Y+ G+G S QA KW AA+ GH AQ
Sbjct: 385 NYATAMQWFRRAADKGDASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRL 444
Query: 276 GLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
G+ ++ EG+ KAV + + A G+ AA + ++ Q RD A
Sbjct: 445 GV-MYAEGQGAARDYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVPRDNA 495
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 18/180 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + HG+GV +N A F K AA+G A G +Y + +EAA Y +
Sbjct: 85 GEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGLPQNYREAA-QWYGR 143
Query: 163 AAVLGDPAGQFNLGISYLQEE----------AVKLLYQASIAGHVRAQYQLALCLHRGRG 212
AA + Q+NL S+L +E A + L +++ GHV AQ++L +G G
Sbjct: 144 AAQQNNAVAQYNL--SHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRYLKGNG 201
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V N AA W+ +AA+ G+ A S G G+ L QA +W++RAA+ G +AQ
Sbjct: 202 VAVNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQ 261
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 18/235 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G G GV+ + +A + A +G A G MY + D K AA S +++
Sbjct: 229 GSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQNSLGRMYMDGVGVPRDYKLAA-SWFQK 287
Query: 163 AAVLGDPAGQ--------FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A + GQ + LG+ A + +A+ H AQY L G G
Sbjct: 288 SAEQWNADGQNHLGRLYLYGLGVEQSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTP 347
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N A +WY +AAE G+ A+ N Y+ G G+ ++ A +W +RAAD G AQ
Sbjct: 348 QNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRAADKGDASAQFN 407
Query: 275 ----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ G + +A+ + A G + A + V+ + +RD V
Sbjct: 408 LARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAARDYGKAV 462
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
G + +G+G+ +N +A + + A + + +A + +Y E + S Q +
Sbjct: 121 GALYANGQGLPQNYREAAQWYGRAAQQNNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKS 180
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G QF LG YL+ V + Y +A+ GH AQ QL L G GV
Sbjct: 181 AAQGHVTAQFELGQRYLKGNGVAVNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKL 240
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ +AA+W RAAE G RA + Y G G+P ++ A W +++A+
Sbjct: 241 DPVQAAQWLQRAAEQGDARAQNSLGRMYMDGVGVPRDYKLAASWFQKSAE 290
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGV 213
QAA GD Q LG Y+ + V + +A+ GH AQ L G+G+
Sbjct: 71 QAAERGDAKAQNQLGEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGL 130
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
N +EAA+WY RAA+ A YN S Y G G+P S A +W++++A GH AQ
Sbjct: 131 PQNYREAAQWYGRAAQQNNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQF 190
Query: 274 EHG 276
E G
Sbjct: 191 ELG 193
>gi|440794803|gb|ELR15953.1| tetratricopeptide repeat domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 511
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPA 170
GV K++ KA +L A + + A G+ Y + D K+A + Y++AA GDP
Sbjct: 213 GVEKDMFKAFAYYLLAARKSDSKAQFKVGVFYSKGYAVHQDYKKA-MKWYKRAAQQGDPD 271
Query: 171 GQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NLG Y +AV +A + GH A+ L C H GRGV +L A +
Sbjct: 272 AQCNLGWMYASGQGTEADDAQAVFWYQKAVVKGHAVAECNLGNCYHDGRGVAKDLAVAFK 331
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
WY +A+ G + Y G+G+ +A +W +A+ GH AQ + G
Sbjct: 332 WYESSAQKGNAVGQHKLGWAYFNGDGVEKDESKAGEWWHKASAQGHAAAQCDLG 385
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + GRGV K+L A + A +G+ + G Y+ D E A + +A
Sbjct: 313 GNCYHDGRGVAKDLAVAFKWYESSAQKGNAVGQHKLGWAYFNGDGVEKDESKAGEWWHKA 372
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
+ G A Q +LG +Y +AV+L QA+ G+ AQ L + G V
Sbjct: 373 SAQGHAAAQCDLGWAYDNGRGVPKDSAKAVELYLQAAAQGNFFAQNNLGIVFKNGMAVPM 432
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+L +A W+++AAE Y + Y Y G + H +A +W ++AA+
Sbjct: 433 DLAQAFEWFMKAAEQDYANSQYWVGYFYDHGWVVEKDHVKAAEWYEKAAE 482
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAI 157
+A L W + G+G + +A+ + K +G +A + G Y + K+ A+
Sbjct: 271 DAQCNLGW--MYASGQGTEADDAQAVFWYQKAVVKGHAVAECNLGNCYHDGRGVAKDLAV 328
Query: 158 SL--YRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCL 207
+ Y +A G+ GQ LG +Y + V+ ++AS GH AQ L
Sbjct: 329 AFKWYESSAQKGNAVGQHKLGWAYFNGDGVEKDESKAGEWWHKASAQGHAAAQCDLGWAY 388
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + +A YL+AA G A N + + G +P+ QA +W +AA+
Sbjct: 389 DNGRGVPKDSAKAVELYLQAAAQGNFFAQNNLGIVFKNGMAVPMDLAQAFEWFMKAAEQD 448
Query: 268 HGKAQLEHGL----GLFTEGEMMKAVVYLELATR 297
+ +Q G G E + +KA + E A
Sbjct: 449 YANSQYWVGYFYDHGWVVEKDHVKAAEWYEKAAE 482
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQ 200
E D K+A + +AA GDP QFN+ + + E A+K +++ +G+ R
Sbjct: 142 ERDHKQA-FFWFNKAAEHGDPKAQFNIAVMHEDGEGAERDPALALKWYTKSAESGYKRPC 200
Query: 201 YQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
Y+L GV+ ++ +A +YL AA +A + + YS G + +++A KW
Sbjct: 201 YELGRIYENAECGVEKDMFKAFAYYLLAARKSDSKAQFKVGVFYSKGYAVHQDYKKAMKW 260
Query: 260 MKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAAD 304
KRAA G AQ G G TE + +AV + + A G A+
Sbjct: 261 YKRAAQQGDPDAQCNLGWMYASGQGTEADDAQAVFWYQKAVVKGHAVAE 309
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
HVR+ Y + GRGV+ + ++A W+ +AAE G +A +N ++ + GEG
Sbjct: 124 HVRSIYAIGSLYDGGRGVERDHKQAFFWFNKAAEHGDPKAQFNIAVMHEDGEGAERDPAL 183
Query: 256 ARKWMKRAADCGHGKAQLEHG-----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
A KW ++A+ G+ + E G E +M KA Y LA R ++ A V
Sbjct: 184 ALKWYTKSAESGYKRPCYELGRIYENAECGVEKDMFKAFAYYLLAARKSDSKAQFKVGVF 243
Query: 311 LQQLSATSRD 320
+ A +D
Sbjct: 244 YSKGYAVHQD 253
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 87 VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM 146
V W ++ A+ + G + +G GV K+ KA + + K +A+G A D G
Sbjct: 328 VAFKWYESSAQKGNAVGQHKLGWAYFNGDGVEKDESKAGEWWHKASAQGHAAAQCDLGWA 387
Query: 147 YWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQEEAVKL--------LYQASIA 194
Y + K A A+ LY QAA G+ Q NLGI + AV + +A+
Sbjct: 388 YDNGRGVPKDSAKAVELYLQAAAQGNFFAQNNLGIVFKNGMAVPMDLAQAFEWFMKAAEQ 447
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
+ +QY + G V+ + +AA WY +AAE + Y + Y G G+ + +
Sbjct: 448 DYANSQYWVGYFYDHGWVVEKDHVKAAEWYEKAAEQKNAGSQYALAGMYETGRGVEKNLQ 507
Query: 255 QA 256
+A
Sbjct: 508 KA 509
>gi|85713621|ref|ZP_01044611.1| sel1-like repeat protein [Nitrobacter sp. Nb-311A]
gi|85699525|gb|EAQ37392.1| sel1-like repeat protein [Nitrobacter sp. Nb-311A]
Length = 653
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM------DKKEAAISLYRQAAVL 166
+G GV K++D+A ++ L+ AAR + A ++ D +EAA+ Y +AA
Sbjct: 253 NGHGVAKDIDRA-ETALRKAARRDYFPAIQALAEFYSHGAGFAPDLREAAV-WYEKAAER 310
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
D QF +G Y +A + +A+ GH A + +A+ G GV+ N++
Sbjct: 311 DDVQAQFFMGRFYATGTGVGPNIRQAARWFERAARNGHATAAFNIAVFYLNGSGVERNVE 370
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
A W+ RA+EGG A YS G G+P H++A +W+ RAA G A+ + L
Sbjct: 371 SAIEWFERASEGGIRAAQLQLGRLYSAGNGIPRDHKRAEEWLSRAAVGGDPDAKTAYALF 430
Query: 279 LF 280
L
Sbjct: 431 LL 432
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
F HG V +N+D A A RG A G MY E + A + Y AA
Sbjct: 107 FPHGTSVERNVDAAFHWISVAAERGKAEAQTVLGNMYSEGLGCEKNLQIAFAWYGVAAEQ 166
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQ 218
A +F LG Y Q + V + ++ + A HVRAQ LA +G G+ NL
Sbjct: 167 NCAAAEFALGDIYFQGKGVPIDFEQAAAWYRKAAEQDHVRAQVALAFMNLKGTGMPENLA 226
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
EAAR + AA V A+YN L G G+ +A +++AA
Sbjct: 227 EAARLFQSAAMHDDVIALYNIGLLRLNGHGVAKDIDRAETALRKAA 272
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI---SLYRQ 162
R G + G G+ +++ A + + A RG+ A GL++ +K +RQ
Sbjct: 30 RIGMLYAKGEGIDRSVPDAAIWYERAARRGNVEAQFHLGLIFLRGEKPLLGPHRHETWRQ 89
Query: 163 AAV--LGDPAGQ-----FNLGISYLQ--EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
++ LGD A F G S + + A + A+ G AQ L G G
Sbjct: 90 SSAVRLGDRASNIHQLVFPHGTSVERNVDAAFHWISVAAERGKAEAQTVLGNMYSEGLGC 149
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ NLQ A WY AAE A + Y G+G+P+ QA W ++AA+ H +AQ+
Sbjct: 150 EKNLQIAFAWYGVAAEQNCAAAEFALGDIYFQGKGVPIDFEQAAAWYRKAAEQDHVRAQV 209
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 8/136 (5%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLAL 205
EAA+ + +AA G Q+ L + +L+ + A L +A+ AGH AQ+QLA+
Sbjct: 478 EAAVGWFARAASAGYVDAQYTLALLHLEPKNGLSDAKAAASWLTKAAHAGHAGAQFQLAV 537
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G G+ ++++ A+WY AA G+ A +N ++ G+G +A +W +RAA
Sbjct: 538 LYCTGAGLARDVEQGAQWYEAAARQGHKVAQFNLAVMLGKGQGCEPDPGKAVEWFERAAQ 597
Query: 266 CGHGKAQLEHGLGLFT 281
+AQ+ G L +
Sbjct: 598 QDMAEAQVALGDALMS 613
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAG 171
G +++ A+ F + A+ G A L++ E + +AA S +AA G
Sbjct: 472 GGSADVEAAVGWFARAASAGYVDAQYTLALLHLEPKNGLSDAKAAASWLTKAAHAGHAGA 531
Query: 172 QFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
QF L + Y E+ + A+ GH AQ+ LA+ L +G+G + + +A W
Sbjct: 532 QFQLAVLYCTGAGLARDVEQGAQWYEAAARQGHKVAQFNLAVMLGKGQGCEPDPGKAVEW 591
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ RAA+ A G G+ A +W RAA H AQ
Sbjct: 592 FERAAQQDMAEAQVALGDALMSGSGVAKDEGAAVQWYLRAASQNHEGAQ 640
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y++ + +G G+D ++ +AA WY RAA G V A ++ L + GE L + W
Sbjct: 29 YRIGMLYAKGEGIDRSVPDAAIWYERAARRGNVEAQFHLGLIFLRGEKPLLGPHRHETWR 88
Query: 261 KRAA 264
+ +A
Sbjct: 89 QSSA 92
>gi|329123580|ref|ZP_08252142.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
gi|327470322|gb|EGF15782.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
Length = 219
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAG 195
GL +E + A L+ A GD Q+NLG+ Y EAVK +A+ G
Sbjct: 36 GLTAYEQSDYQTAFKLWLPLAEQGDAKAQYNLGVMYGNGRGVKQDDFEAVKWYRKAAEQG 95
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ AQ+ L + G GV ++ EA +WY +AAE G+ +A ++ + Y G+ + +
Sbjct: 96 YASAQFYLGMKYENGSGVKQDVFEAVKWYRKAAEQGHAKAQFDLGVMYDNGQSVKQDDVE 155
Query: 256 ARKWMKRAADCGHGKAQ 272
A KW ++AA+ G+ AQ
Sbjct: 156 AVKWFRKAAEQGNANAQ 172
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 172 QFNLGIS-YLQEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
QF G++ Y Q + A KL + G +AQY L + GRGV + EA +WY +A
Sbjct: 32 QFQQGLTAYEQSDYQTAFKLWLPLAEQGDAKAQYNLGVMYGNGRGVKQDDFEAVKWYRKA 91
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
AE GY A + + Y G G+ +A KW ++AA+ GH KAQ + G+ ++ G+ +K
Sbjct: 92 AEQGYASAQFYLGMKYENGSGVKQDVFEAVKWYRKAAEQGHAKAQFDLGV-MYDNGQSVK 150
Query: 288 -----AVVYLELATRAGETAADHV 306
AV + A G A +
Sbjct: 151 QDDVEAVKWFRKAAEQGNANAQAI 174
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 14/150 (9%)
Query: 132 AARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE---- 182
A +G A + G+MY + D EA + YR+AA G + QF LG+ Y
Sbjct: 56 AEQGDAKAQYNLGVMYGNGRGVKQDDFEA-VKWYRKAAEQGYASAQFYLGMKYENGSGVK 114
Query: 183 ----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
EAVK +A+ GH +AQ+ L + G+ V + EA +W+ +AAE G A
Sbjct: 115 QDVFEAVKWYRKAAEQGHAKAQFDLGVMYDNGQSVKQDDVEAVKWFRKAAEQGNANAQAI 174
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
Y G+G+ ++ A++W +A D G+
Sbjct: 175 LGFSYLLGKGVQVNKSLAKEWFGKACDNGN 204
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 34/142 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++++G GV++++ +A+ + K A +G A D G+MY
Sbjct: 104 GMKYENGSGVKQDVFEAVKWYRKAAEQGHAKAQFDLGVMY-------------------- 143
Query: 168 DPAGQFNLGISYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
+ G S Q+ EAVK +A+ G+ AQ L G+GV N A W+
Sbjct: 144 ------DNGQSVKQDDVEAVKWFRKAAEQGNANAQAILGFSYLLGKGVQVNKSLAKEWFG 197
Query: 226 RAAEGGYVRAMYNTSLCYSFGE 247
+A + G N + C +G+
Sbjct: 198 KACDNG------NQNGCEYYGK 213
>gi|410088873|ref|ZP_11285537.1| hypothetical protein C790_3516 [Morganella morganii SC01]
gi|455739010|ref|YP_007505276.1| hypothetical protein MU9_1857 [Morganella morganii subsp. morganii
KT]
gi|409764619|gb|EKN48797.1| hypothetical protein C790_3516 [Morganella morganii SC01]
gi|455420573|gb|AGG30903.1| hypothetical protein MU9_1857 [Morganella morganii subsp. morganii
KT]
Length = 234
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNL 175
LD + + A G A V G Y+ +D K AA Y +AAV G+ Q++L
Sbjct: 23 LDTQDSALCEAANGGDAGAQVTIGSYYYYGNGAPIDYKTAA-DWYTKAAVQGNEYAQYSL 81
Query: 176 GISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G Y Q E V+ Y+ +I G+ AQ++L G GV+ + +AA WY +A
Sbjct: 82 GEMYFQGEGVQQDYRQAIEWFHKSGEQGNAGAQFRLGAIYEDGDGVNPDFLKAAEWYKKA 141
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
AE G + Y + Y +G+G+ ++R A +W K+AAD
Sbjct: 142 AEQGNAFSQYQLAKMYYYGKGIEQNYRVAAEWYKKAAD 179
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + +G G + A D + K A +G+ A G MY++ + + AI + ++
Sbjct: 46 GSYYYYGNGAPIDYKTAADWYTKAAVQGNEYAQYSLGEMYFQGEGVQQDYRQAIEWFHKS 105
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
G+ QF LG Y + V + +A+ G+ +QYQLA + G+G++
Sbjct: 106 GEQGNAGAQFRLGAIYEDGDGVNPDFLKAAEWYKKAAEQGNAFSQYQLAKMYYYGKGIEQ 165
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
N + AA WY +AA+ Y A+ + + GEG+ S +A
Sbjct: 166 NYRVAAEWYKKAADQKYAFALAKLAEMHLSGEGVEKSQPKAE 207
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQ 200
E+D +++A+ +AA GD Q +G Y + Y+ A++ G+ AQ
Sbjct: 22 ELDTQDSALC---EAANGGDAGAQVTIGSYYYYGNGAPIDYKTAADWYTKAAVQGNEYAQ 78
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y L +G GV + ++A W+ ++ E G A + Y G+G+ +A +W
Sbjct: 79 YSLGEMYFQGEGVQQDYRQAIEWFHKSGEQGNAGAQFRLGAIYEDGDGVNPDFLKAAEWY 138
Query: 261 KRAADCGHGKAQLE 274
K+AA+ G+ +Q +
Sbjct: 139 KKAAEQGNAFSQYQ 152
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L +A+ G AQ + + G G + + AA WY +AA G A Y+ Y GE
Sbjct: 30 LCEAANGGDAGAQVTIGSYYYYGNGAPIDYKTAADWYTKAAVQGNEYAQYSLGEMYFQGE 89
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
G+ +RQA +W ++ + G+ AQ G ++ +G+
Sbjct: 90 GVQQDYRQAIEWFHKSGEQGNAGAQFRLG-AIYEDGD 125
>gi|262281380|ref|ZP_06059161.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
calcoaceticus RUH2202]
gi|262257206|gb|EEY75943.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
calcoaceticus RUH2202]
Length = 230
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDP 169
+GV KN ++A GS A G+MY+ E D K A + +AA
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYYTGTGVEKDAKR-AFDYFTKAAAKDHA 112
Query: 170 AGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NLG+ Y + E Y +A+ G+ A+Y LA +G G+ + ++
Sbjct: 113 KAQYNLGVLYDKGEGTAQNYVQAFEWFSRAAEQGYPPAEYNLAQLYKKGHGITQSDEQTL 172
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+WY +AAE G A YN + Y GEG P + + A+KW ++AAD G
Sbjct: 173 KWYTKAAEHGESDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAG 218
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 50/184 (27%)
Query: 167 GDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD--- 214
G P Q++LG+ L E+A K L A G V A+Y L + + G GV+
Sbjct: 37 GQPVAQYHLGMMLLSGEQGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYYTGTGVEKDA 96
Query: 215 -------------------FNLQ--------------EAARWYLRAAEGGYVRAMYNTSL 241
+NL +A W+ RAAE GY A YN +
Sbjct: 97 KRAFDYFTKAAAKDHAKAQYNLGVLYDKGEGTAQNYVQAFEWFSRAAEQGYPPAEYNLAQ 156
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGE 300
Y G G+ S Q KW +AA+ HG++ ++ L ++ GE L+LA + +
Sbjct: 157 LYKKGHGITQSDEQTLKWYTKAAE--HGESDAQYNLAQMYLNGEGTPKN--LQLAKKWFQ 212
Query: 301 TAAD 304
AAD
Sbjct: 213 QAAD 216
>gi|383864077|ref|XP_003707506.1| PREDICTED: protein sel-1 homolog 1-like [Megachile rotundata]
Length = 744
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 13/220 (5%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ GRGV + ++AL F A G+ +AM G +Y E E A +++AA
Sbjct: 357 YQGGRGVPLDHERALQYFQHAADAGNAIAMAFLGKIYLEGSDIVKQDNETAYKYFKKAAE 416
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG+P GQ LG+ YL +A++ +A+ G V Q QL G GV +
Sbjct: 417 LGNPVGQSGLGLMYLYGRGVERDTAKALQYFNEAAEQGWVDGQLQLGNMYFSGTGVRRDY 476
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A +++ A++ G+V A YN + ++ G G+ S A + +K A+ G QL
Sbjct: 477 KLANKYFNLASQSGHVLAFYNLAQMHATGTGMMRSCPTAVELLKNVAERGKWSDQLMVAH 536
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 317
+ EG + +A V L G A IL + T
Sbjct: 537 TDYREGRINEAFVKYALLAEMGYEVAQSNAAFILDKGETT 576
>gi|440226925|ref|YP_007334016.1| Sel1 domain-containing protein [Rhizobium tropici CIAT 899]
gi|440038436|gb|AGB71470.1| Sel1 domain-containing protein [Rhizobium tropici CIAT 899]
Length = 526
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 11/126 (8%)
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+PA Q+ LG Y +AV +++ G+ +AQY LA GRGVD +L+
Sbjct: 46 GNPAAQYGLGYRYANGQGVEQDDAQAVDWYRKSAEQGNAQAQYALAYMYASGRGVDTDLK 105
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WYLRAA+ G A Y Y+ G G+ +S A W +++A G+AQ ++ LG
Sbjct: 106 QANDWYLRAAQAGNADAQYAIGYSYANGRGMAVSDEDAVAWYQKSAS--QGQAQAQYALG 163
Query: 279 -LFTEG 283
++ G
Sbjct: 164 YMYANG 169
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +G GV ++ +AL + K A +G A G MY ++A+ YR+A
Sbjct: 271 GYSLANGIGVARDYRQALQWYRKAADQGRPDAQYALGYMYENGQGVKADDDSAVRWYRKA 330
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A GD GQ+ L Y V Y +A+ GH AQY L G+G
Sbjct: 331 AEQGDAQGQYALAYMYAGGRGVGRDYGKAFDWYQKAASQGHADAQYALGYMYENGQGTKA 390
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ AA WY +AA+ + Y + Y G G+P + Q ++AAD G A+ E+
Sbjct: 391 DKSTAASWYRKAADQNNPQGEYALAYLYYQGAGVPKDYGQTAALFRKAAD--QGDARAEY 448
Query: 276 GLG-LFTEG 283
GLG L+ G
Sbjct: 449 GLGYLYYNG 457
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 93 DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE--- 149
D RP E + G + +G+G ++ ++A+ + K +G + G Y
Sbjct: 188 DQGRPDAEYAI----GYMYDNGQGAEEDQEQAVAWYKKAGNQGVAQGLYAVGYAYANGKG 243
Query: 150 MDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
+ + +A A S Y +AA+ G Q+ +G S +A++ +A+ G AQ
Sbjct: 244 VTRNDAEAYSWYMKAAIKGRADAQYAVGYSLANGIGVARDYRQALQWYRKAADQGRPDAQ 303
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y L G+GV + A RWY +AAE G + Y + Y+ G G+ + +A W
Sbjct: 304 YALGYMYENGQGVKADDDSAVRWYRKAAEQGDAQGQYALAYMYAGGRGVGRDYGKAFDWY 363
Query: 261 KRAADCGHGKAQLEHGLGLFTEGEMMKA 288
++AA GH AQ G ++ G+ KA
Sbjct: 364 QKAASQGHADAQYALGY-MYENGQGTKA 390
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ GRGV +L +A D +L+ A G+ A G Y E A++ Y+++A
Sbjct: 94 YASGRGVDTDLKQANDWYLRAAQAGNADAQYAIGYSYANGRGMAVSDEDAVAWYQKSASQ 153
Query: 167 GDPAGQFNLGISYL------QEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q+ LG Y Q+EA+ L + +A+ G A+Y + G+G + + +
Sbjct: 154 GQAQAQYALGYMYANGLGVHQDEAIALGWYRKAADQGRPDAEYAIGYMYDNGQGAEEDQE 213
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +A G + +Y Y+ G+G+ + +A W +AA G AQ G
Sbjct: 214 QAVAWYKKAGNQGVAQGLYAVGYAYANGKGVTRNDAEAYSWYMKAAIKGRADAQYAVGYS 273
Query: 279 L 279
L
Sbjct: 274 L 274
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G R+ +G+GV ++ +A+D + K A +G+ A MY + D K+ A Y +
Sbjct: 55 GYRYANGQGVEQDDAQAVDWYRKSAEQGNAQAQYALAYMYASGRGVDTDLKQ-ANDWYLR 113
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ Q+ +G SY E+AV +++ G +AQY L G GV
Sbjct: 114 AAQAGNADAQYAIGYSYANGRGMAVSDEDAVAWYQKSASQGQAQAQYALGYMYANGLGVH 173
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ A WY +AA+ G A Y Y G+G QA W K+A + G
Sbjct: 174 QDEAIALGWYRKAADQGRPDAEYAIGYMYDNGQGAEEDQEQAVAWYKKAGNQG 226
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-----MYWEMDKKEAAISLYRQ 162
G + +G+GV +N +A ++K A +G A G + D ++A + YR+
Sbjct: 235 GYAYANGKGVTRNDAEAYSWYMKAAIKGRADAQYAVGYSLANGIGVARDYRQA-LQWYRK 293
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G P Q+ LG Y + AV+ +A+ G + QY LA GRGV
Sbjct: 294 AADQGRPDAQYALGYMYENGQGVKADDDSAVRWYRKAAEQGDAQGQYALAYMYAGGRGVG 353
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY +AA G+ A Y Y G+G A W ++AAD Q E
Sbjct: 354 RDYGKAFDWYQKAASQGHADAQYALGYMYENGQGTKADKSTAASWYRKAAD--QNNPQGE 411
Query: 275 HGLG-LFTEG 283
+ L L+ +G
Sbjct: 412 YALAYLYYQG 421
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ GRGV ++ KA D + K A++G A G MY + DK AA S YR+AA
Sbjct: 346 YAGGRGVGRDYGKAFDWYQKAASQGHADAQYALGYMYENGQGTKADKSTAA-SWYRKAAD 404
Query: 166 LGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+P G++ L Y Q V L +A+ G RA+Y L + G GV +
Sbjct: 405 QNNPQGEYALAYLYYQGAGVPKDYGQTAALFRKAADQGDARAEYGLGYLYYNGYGVPKDS 464
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-----PLSHRQARK 258
+ AA W+ +AA G A + S + G+G PL A K
Sbjct: 465 KTAADWFNKAAANGLPEAQHGLSYMEANGDGPIKDLGPLGQGAASK 510
>gi|290982293|ref|XP_002673865.1| Sel1 domain protein repeat-containing protein [Naegleria gruberi]
gi|284087451|gb|EFC41121.1| Sel1 domain protein repeat-containing protein [Naegleria gruberi]
Length = 404
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 10/177 (5%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
++ +LL W ++ GRGV +N + AL + K A GS A+ G +Y+ D A+S
Sbjct: 119 DSQILLGW--FYESGRGVEENQEMALYWYKKAADNGSVDAIYRCGNVYYMGDDYSNALSW 176
Query: 160 YRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+ + LGD +G+ Y ++A + ++ G + +++ H G
Sbjct: 177 FWKGNALGDAQSMEKIGLMYRHGFGLKRDLKKAFEYFENSADLGCIDGIFRVGYAFHSGE 236
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
GV + EA +YL AAE G A N + Y G+G+ + + A KW+K A + G+
Sbjct: 237 GVKLDYSEAMEYYLDAAEMGDALAKNNIADMYLKGQGVQQNFQTALKWIKEAMEQGN 293
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 51/260 (19%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW- 148
SW L +A + + G ++HG G++++L KA + F A G + G +
Sbjct: 175 SWFWKGNALGDAQSMEKIGLMYRHGFGLKRDLKKAFEYFENSADLGCIDGIFRVGYAFHS 234
Query: 149 ----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA 204
++D E A+ Y AA +GD + N+ YL
Sbjct: 235 GEGVKLDYSE-AMEYYLDAAEMGDALAKNNIADMYL------------------------ 269
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVR--AMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+G+GV N Q A +W A E G A Y LC G G+ + +A KR
Sbjct: 270 ----KGQGVQQNFQTALKWIKEAMEQGNFDSIATYGEMLCN--GNGVEQDYNKAFDHFKR 323
Query: 263 AADCGHGKA-------QLEHGLGLFTEGEMMKA-VVYLELATRAGETAADHVKNVILQQL 314
++D G+ + E+G G E ++ KA V+YL A A ++ + L
Sbjct: 324 SSDSGYCEFAHFLLGRMYENGWG--CEKDINKAYVLYLRGAKEGDADAITRLETPFKKAL 381
Query: 315 SATSR---DRAMLVVDSWRA 331
S D +L VD R+
Sbjct: 382 FTKSSPLFDTVILTVDEDRS 401
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 12/130 (9%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ E+A L +A+ + +Q L GRGV+ N + A WY +AA+ G V A
Sbjct: 97 GVEENVEKAFYWLKKAAEGEELDSQILLGWFYESGRGVEENQEMALYWYKKAADNGSVDA 156
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA------QLEHGLGLFTEGEMMKAV 289
+Y Y G+ + A W + G ++ HG GL + ++ KA
Sbjct: 157 IYRCGNVYYMGD----DYSNALSWFWKGNALGDAQSMEKIGLMYRHGFGL--KRDLKKAF 210
Query: 290 VYLELATRAG 299
Y E + G
Sbjct: 211 EYFENSADLG 220
>gi|46446347|ref|YP_007712.1| hypothetical protein pc0713 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399988|emb|CAF23437.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 447
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 128 FLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ- 181
F A +G A G MY E +EA I ++ AA GD Q+NL Y +
Sbjct: 244 FKLAADQGDVNAQSKLGTMYKKGLGVEQSNQEA-IKYFKLAADQGDVNAQYNLAFMYAKG 302
Query: 182 -------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
+EA+K + G AQ L +G+G+ + QEAA+++ AA+ G
Sbjct: 303 KRVPQSHQEAIKYFELIADQGEAIAQCALGFMYFQGKGITQSHQEAAKYFKFAADQGEAD 362
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVV 290
A Y+ G G+ S ++A K+ K AAD GH AQ E G GL E +A+
Sbjct: 363 AQCALGFMYANGLGVTQSDQEAAKYYKLAADQGHADAQYELGTMYKKGLGVEQSSQEALR 422
Query: 291 YLELATRAGET-AADHVKNVILQQ 313
Y +LA G T AA + ++I Q+
Sbjct: 423 YYQLAAEQGNTQAAIKIDSIISQK 446
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 94/213 (44%), Gaps = 15/213 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEAAISLYRQAA 164
G R+K GRGV ++ +A F A +G A ++ L+ D + ++ AA
Sbjct: 189 GIRYKKGRGVSQSNQEATKYFQLAAKQGHAEAQLELKLIIESHDIAQTNQETFKYFKLAA 248
Query: 165 VLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
GD Q LG Y + +EA+K A+ G V AQY LA +G+ V +
Sbjct: 249 DQGDVNAQSKLGTMYKKGLGVEQSNQEAIKYFKLAADQGDVNAQYNLAFMYAKGKRVPQS 308
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
QEA +++ A+ G A Y G+G+ SH++A K+ K AAD G AQ G
Sbjct: 309 HQEAIKYFELIADQGEAIAQCALGFMYFQGKGITQSHQEAAKYFKFAADQGEADAQCALG 368
Query: 277 L----GLFTEGEMMKAVVYLELATRAGETAADH 305
GL +A Y +LA G A +
Sbjct: 369 FMYANGLGVTQSDQEAAKYYKLAADQGHADAQY 401
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 116/277 (41%), Gaps = 59/277 (21%)
Query: 85 SLVCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
S + S + + P++ +A G +K+G+ V ++ +A F A +G
Sbjct: 88 SKIIYSSSPSFLPIKLLADQGDAKAQCELGLMYKNGQVVAQSDAEAFKYFKLAADQGDVK 147
Query: 139 AMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVK 186
A + G MY + ++ AI ++ AA G QF +GI Y + +EA K
Sbjct: 148 AQYNLGCMYINGRGVVHSEQEAIKYFKFAADQGHADAQFIIGIRYKKGRGVSQSNQEATK 207
Query: 187 LLYQASIAGHVRAQYQLALCLH-----------------------------------RGR 211
A+ GH AQ +L L + +G
Sbjct: 208 YFQLAAKQGHAEAQLELKLIIESHDIAQTNQETFKYFKLAADQGDVNAQSKLGTMYKKGL 267
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV+ + QEA +++ AA+ G V A YN + Y+ G+ +P SH++A K+ + AD G A
Sbjct: 268 GVEQSNQEAIKYFKLAADQGDVNAQYNLAFMYAKGKRVPQSHQEAIKYFELIADQGEAIA 327
Query: 272 QLEHGLGLFTEGEMM-----KAVVYLELATRAGETAA 303
Q G ++ +G+ + +A Y + A GE A
Sbjct: 328 QCALGF-MYFQGKGITQSHQEAAKYFKFAADQGEADA 363
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +AQ +L L G+ V + EA +++ AA+ G V+A YN Y G G+ S +
Sbjct: 108 GDAKAQCELGLMYKNGQVVAQSDAEAFKYFKLAADQGDVKAQYNLGCMYINGRGVVHSEQ 167
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
+A K+ K AAD GH AQ G+ G +A Y +LA + G A +I
Sbjct: 168 EAIKYFKFAADQGHADAQFIIGIRYKKGRGVSQSNQEATKYFQLAAKQGHAEAQLELKLI 227
Query: 311 LQ 312
++
Sbjct: 228 IE 229
>gi|124005705|ref|ZP_01690544.1| TPR repeat protein [Microscilla marina ATCC 23134]
gi|123988773|gb|EAY28379.1| TPR repeat protein [Microscilla marina ATCC 23134]
Length = 417
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKG--AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
++ G+GV ++L+KA D ++K + + A++D+ WE D + +++RQ AV G+
Sbjct: 179 YEQGQGVTQDLNKAFDLYIKSLKSVKSPAYALLDS----WE-DIPKNVWTVFRQKAVNGN 233
Query: 169 PAGQFNLG----ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
P Q+ L +Y E A+ ++++ GH AQ L G G + ++A +WY
Sbjct: 234 PEMQYKLAELYRCAYAYERALPWFEKSALQGHAVAQTTLGTMYSLGEGTSKSYEKAFQWY 293
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ AE A +N + Y G G+P+ +QA + K++A G AQ+
Sbjct: 294 -KKAEARNRFAQFNLGMMYYEGNGMPIDKKQALYYFKKSAKQGVINAQM 341
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 18/166 (10%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMY--WEMDKK--EAAISLYRQAAVLGDPAGQFNLGI 177
++AL F K A +G +A G MY E K E A Y++A A QFNLG+
Sbjct: 251 ERALPWFEKSALQGHAVAQTTLGTMYSLGEGTSKSYEKAFQWYKKAEARNRFA-QFNLGM 309
Query: 178 SYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF-NLQEAARWYLRAA 228
Y + ++A+ +++ G + AQ + L VDF N +A W +AA
Sbjct: 310 MYYEGNGMPIDKKQALYYFKKSAKQGVINAQ----MLLVYTYAVDFKNYDQAFIWCSKAA 365
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ G A Y +L Y G+G ++ + + WMK+AAD G+ KA++E
Sbjct: 366 KQGNSMAQYQLALYYREGKGTEVNPKLEKHWMKKAADNGYIKAKIE 411
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G G K+ +KA + K AR + A + G+MY+E +DKK+ A+ +++
Sbjct: 273 GTMYSLGEGTSKSYEKAFQWYKKAEAR-NRFAQFNLGMMYYEGNGMPIDKKQ-ALYYFKK 330
Query: 163 AAVLGDPAGQFNLGISYL-----QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+A G Q L +Y ++A +A+ G+ AQYQLAL G+G + N
Sbjct: 331 SAKQGVINAQMLLVYTYAVDFKNYDQAFIWCSKAAKQGNSMAQYQLALYYREGKGTEVNP 390
Query: 218 QEAARWYLRAAEGGYVRA 235
+ W +AA+ GY++A
Sbjct: 391 KLEKHWMKKAADNGYIKA 408
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
K +K G V++NL KA + + + +G +MV GL ++E K + A+ +RQAA D
Sbjct: 46 KAYKRGDKVKQNLKKARYWYRQSSKQGFHKSMVGLGLWHYEQHKYKKALYWFRQAAYSDD 105
Query: 169 PAGQFNLGISY 179
GQ+ LG+ Y
Sbjct: 106 FNGQYYLGLMY 116
>gi|281421328|ref|ZP_06252327.1| Sel1 protein [Prevotella copri DSM 18205]
gi|281404400|gb|EFB35080.1| Sel1 protein [Prevotella copri DSM 18205]
Length = 244
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-----EE---AVKLLYQASIAGHVRAQ 200
EM K+ + YRQ A+ GD N+G+ Y Q E+ A + +A+ G + A
Sbjct: 30 EMKKERETANKYRQQALEGDLMAMNNMGVCYAQGIGVVEDHVMAFQWYMKAAELGDIYAC 89
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y +A C ++G GV+ + + A WYL AAE G V++ N + + G+G H +A +W
Sbjct: 90 YNVAECYYQGDGVEQDFERALHWYLIAAEKGDVQSQVNAANAFYLGQGTEEDHVKAHQWW 149
Query: 261 KRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
+AA GH ++Q G G E + A + E+A + G+ A
Sbjct: 150 LKAAQRGHLQSQKNVGANYRNGDGVEKDDSWAAFWYEMAGQQGDPQA 196
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 126 DSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ 181
+ + + A G +AM + G+ Y + ++ A Y +AA LGD +N+ Y Q
Sbjct: 39 NKYRQQALEGDLMAMNNMGVCYAQGIGVVEDHVMAFQWYMKAAELGDIYACYNVAECYYQ 98
Query: 182 EEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+ V+ ++ A+ G V++Q A + G+G + + +A +W+L+AA+ G++
Sbjct: 99 GDGVEQDFERALHWYLIAAEKGDVQSQVNAANAFYLGQGTEEDHVKAHQWWLKAAQRGHL 158
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
++ N Y G+G+ A W + A G +AQ G T
Sbjct: 159 QSQKNVGANYRNGDGVEKDDSWAAFWYEMAGQQGDPQAQFSTGWFYMT 206
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AI 157
M + G + G GV ++ A ++K A G A + Y++ D E A+
Sbjct: 51 MAMNNMGVCYAQGIGVVEDHVMAFQWYMKAAELGDIYACYNVAECYYQGDGVEQDFERAL 110
Query: 158 SLYRQAAVLGDPAGQFNLGISYL-----QEEAVK---LLYQASIAGHVRAQYQLALCLHR 209
Y AA GD Q N ++ +E+ VK +A+ GH+++Q +
Sbjct: 111 HWYLIAAEKGDVQSQVNAANAFYLGQGTEEDHVKAHQWWLKAAQRGHLQSQKNVGANYRN 170
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
G GV+ + AA WY A + G +A ++T Y G G+ R+ KW+ RA
Sbjct: 171 GDGVEKDDSWAAFWYEMAGQQGDPQAQFSTGWFYMTGTGVKQDKRKGLKWIHRA 224
>gi|91793809|ref|YP_563460.1| Sel1 [Shewanella denitrificans OS217]
gi|91715811|gb|ABE55737.1| Sel1 [Shewanella denitrificans OS217]
Length = 348
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQY 201
D GL+ +MD+++A + LY+QAA LG+ QFNLG+SY + + + Y+ + ++
Sbjct: 60 DEGLVV-DMDQQKA-VMLYKQAAELGNIKAQFNLGLSYYGGQGIDINYELAFEWLLKTAK 117
Query: 202 Q--------LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
Q + +G+GV+ N+ E +WY AAEGG Y + Y +G +P
Sbjct: 118 QGFEPAYDVVGSMYSKGQGVEKNINETVKWYRLAAEGGSGAVSYVLASMYYYGTDIPKDL 177
Query: 254 RQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
QA K+ AA+ + AQ L L+ GE
Sbjct: 178 AQAVKYFSNAANLNYADAQYTMAL-LYARGE 207
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGS-TLAMVDAGLMYWEMDKKE---AAISLYRQA 163
G + G+GV KN+++ + + A GS ++ V A + Y+ D + A+ + A
Sbjct: 128 GSMYSKGQGVEKNINETVKWYRLAAEGGSGAVSYVLASMYYYGTDIPKDLAQAVKYFSNA 187
Query: 164 AVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A L Q+ + + Y + E V +LL A+ V AQ+ L G D
Sbjct: 188 ANLNYADAQYTMALLYARGEGVDVDTQKSMELLLAAAEQELVDAQFFLGEIFRTGEWGDK 247
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ + + RW+ AA+ G A + LC+ G+G PL++ +A K+ + AA+ G AQ
Sbjct: 248 DPKASCRWHQLAADQGNFNAQFRVGLCFYTGKGKPLNYEEAVKYFQLAAEQGQNNAQYLL 307
Query: 276 GLGLFTEGEMMKAVVYLE 293
GL ++T G ++ Y+E
Sbjct: 308 GL-MYTTGMAGLSIDYVE 324
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
LA G VD + Q+A Y +AAE G ++A +N L Y G+G+ +++ A +W+ +
Sbjct: 55 LANFYDEGLVVDMDQQKAVMLYKQAAELGNIKAQFNLGLSYYGGQGIDINYELAFEWLLK 114
Query: 263 AADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAADHV 306
A G A G ++++G+ + + V + LA G A +V
Sbjct: 115 TAKQGFEPAYDVVG-SMYSKGQGVEKNINETVKWYRLAAEGGSGAVSYV 162
>gi|307179553|gb|EFN67867.1| Protein sel-1-like protein 1 [Camponotus floridanus]
Length = 763
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAV 165
++ GRGV + ++A+ F A G+ +AM G +Y E + E A +++AA
Sbjct: 374 YQGGRGVPLDHERAVQYFQHAADAGNPVAMAFLGKIYLEGSEIVKQDNETAYKYFKKAAE 433
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG+P GQ LG+ YL +A++ QA+ G V Q QL G GV +
Sbjct: 434 LGNPVGQSGLGLMYLYGMGVERNTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGVRRDY 493
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A +++ A++ G+V A YN + ++ G GL S A + MK A+ G QL
Sbjct: 494 KLANKYFTLASQSGHVLAYYNLAQMHATGTGLMRSCPTAVELMKNVAERGKWSDQLMVAH 553
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 311
+ +G + +A + L + G A IL
Sbjct: 554 NDYRDGRVNEAFLNYALFSEMGYEVAQSNAAFIL 587
>gi|92116632|ref|YP_576361.1| Sel1-like protein [Nitrobacter hamburgensis X14]
gi|91799526|gb|ABE61901.1| Sel1-like protein [Nitrobacter hamburgensis X14]
Length = 679
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLYRQAAVL 166
+G GV K++D+A ++ L+ AAR V A ++ E D +EAA+ Y +AA
Sbjct: 279 NGHGVAKDIDRA-ETALRKAARKDYFPAVQALADFYSHGAGSEPDLREAAV-WYEKAAER 336
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
D QF +G Y +A K +A+ GH A + +A+ G GV+ N++
Sbjct: 337 DDVQAQFFMGRFYATGTGVGPNIRQAAKWFERAAGNGHATAAFNIAIFYLNGSGVERNVE 396
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
A W+ RA+E G A YS G G+P H++A +W+ +AA G A+ +
Sbjct: 397 AAIEWFERASESGIRAAQLQLGRLYSAGNGVPRDHKRAGEWLSKAASGGEPDAKTAYAFF 456
Query: 279 LF 280
L
Sbjct: 457 LL 458
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
EAA+S + +AA G GQ+ L + YL + AV + +A+ AGH AQ+QLA+
Sbjct: 504 EAAVSWFSRAAGAGHVEGQYTLALLYLDPNNAVSDAKAAVSWMTRAAHAGHAGAQFQLAV 563
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G GV ++ + A WY AA G+ A +N ++ G+G +A +W ++AA+
Sbjct: 564 IYCTGAGVAQDVAQGANWYEAAARQGHKVAQFNLAVMLGKGQGCEADPGKAVEWFEKAAE 623
Query: 266 CGHGKAQLEHGLGLFT 281
+AQ+ G L +
Sbjct: 624 QDMAEAQVALGDALMS 639
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQAAVL 166
F HG V +N+D A A RG A G MY E E AA++ YR AA
Sbjct: 133 FPHGTSVERNVDAAFGWIAVAAERGKAEAQTVLGNMYCEGVGCEKDFRAALAWYRAAADQ 192
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
A +F LG + Q + V + ++ A+ HVRAQ LA +G G+ +
Sbjct: 193 NCAAAEFALGDVHYQGKGVPVDFEQAAVWYRKAAEQDHVRAQVALAFMNLKGTGLPEDPA 252
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------ 272
EAAR + AA A+YN L G G+ +A +++AA + A
Sbjct: 253 EAARLFQGAARQDDTIALYNIGLLRLNGHGVAKDIDRAETALRKAARKDYFPAVQALADF 312
Query: 273 LEHGLGLFTEGEMMKAVVYLELATR 297
HG G +E ++ +A V+ E A
Sbjct: 313 YSHGAG--SEPDLREAAVWYEKAAE 335
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
EA+KL AS AG A Y++ + RG GV ++ +A WY AA G V AM+ L
Sbjct: 37 EAIKLWKLASEAGEAEAGYRIGMLYVRGEGVVRSVPDAVVWYEWAARLGNVEAMFQLGLI 96
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 298
+ G+ L + W + +A KA H L G E + A ++ +A
Sbjct: 97 FLHGDKPLLGPCRHETWRQSSAVRLGDKASTIHQLVFPHGTSVERNVDAAFGWIAVAAER 156
Query: 299 GETAADHV 306
G+ A V
Sbjct: 157 GKAEAQTV 164
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 12/161 (7%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNL 175
+++ A+ F + A G L+Y + + +AA+S +AA G QF L
Sbjct: 502 DVEAAVSWFSRAAGAGHVEGQYTLALLYLDPNNAVSDAKAAVSWMTRAAHAGHAGAQFQL 561
Query: 176 GISYLQEEAVKL-------LYQASI-AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ Y V Y+A+ GH AQ+ LA+ L +G+G + + +A W+ +A
Sbjct: 562 AVIYCTGAGVAQDVAQGANWYEAAARQGHKVAQFNLAVMLGKGQGCEADPGKAVEWFEKA 621
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
AE A G G+ A W ++AA H
Sbjct: 622 AEQDMAEAQVALGDALMSGSGVAQDRDAAVHWYQQAARQNH 662
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 20/219 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G GV +N++ A++ F + + G A + G +Y D K A L + AA
Sbjct: 385 YLNGSGVERNVEAAIEWFERASESGIRAAQLQLGRLYSAGNGVPRDHKRAGEWLSK-AAS 443
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGR-GVDFN 216
G+P + L E+ LL +A+ AGH A +QL + L GR G +
Sbjct: 444 GGEPDAKTAYAFFLLHHDDSTERLEQVRSLLSEAAEAGHAPAAFQLGV-LEMGRFGGSVD 502
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE-- 274
++ A W+ RAA G+V Y +L Y + A WM RAA GH AQ +
Sbjct: 503 VEAAVSWFSRAAGAGHVEGQYTLALLYLDPNNAVSDAKAAVSWMTRAAHAGHAGAQFQLA 562
Query: 275 --HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 311
+ G ++ + + E A R G A V+L
Sbjct: 563 VIYCTGAGVAQDVAQGANWYEAAARQGHKVAQFNLAVML 601
>gi|392964382|ref|ZP_10329803.1| Putative beta-lactamase hcpC [Fibrisoma limi BUZ 3]
gi|387847277|emb|CCH51847.1| Putative beta-lactamase hcpC [Fibrisoma limi BUZ 3]
Length = 303
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQA 191
+VD GL +WE A +R+AA G GQ+NL + Y +A L A
Sbjct: 47 LVDEGLRFWERKDYTKAEQCFRKAADKGYSWGQYNLALCYFHGKGASKDLSKAAVLFQLA 106
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
+ G+ AQ LA H G G+ N ++A WY AA+ G V+A Y FG+G+
Sbjct: 107 ARQGNTEAQCCLATMYHFGMGIHTNFEQALSWYTLAAKAGNVQAHTYIGSMYQFGQGVQK 166
Query: 252 SHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
++ A W ++AA G A + LG EG
Sbjct: 167 DYQTAHDWYQKAAQ--KGCANAMYYLGSLYEG 196
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 83 AASLVCKSWNDALRP----LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
A S +S N A RP + E L+ G RF RK+ KA F K A +G +
Sbjct: 22 ANSPAARSANKACRPDSMVVTENQRLVDEGLRFWE----RKDYTKAEQCFRKAADKGYSW 77
Query: 139 AMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQ--------FNLGISYLQEEAV 185
+ L Y+ D +AA+ L++ AA G+ Q F +GI E+A+
Sbjct: 78 GQYNLALCYFHGKGASKDLSKAAV-LFQLAARQGNTEAQCCLATMYHFGMGIHTNFEQAL 136
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
A+ AG+V+A + G+GV + Q A WY +AA+ G AMY Y
Sbjct: 137 SWYTLAAKAGNVQAHTYIGSMYQFGQGVQKDYQTAHDWYQKAAQKGCANAMYYLGSLYEG 196
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKA 271
G G+ + ++A W + +AD + +A
Sbjct: 197 GYGVAKNTKEALTWYRASADQNNAEA 222
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 84/227 (37%), Gaps = 51/227 (22%)
Query: 107 WGKR-----FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEM---DKKEAAI 157
WG+ + HG+G K+L KA F A +G+T A MY + M E A+
Sbjct: 77 WGQYNLALCYFHGKGASKDLSKAAVLFQLAARQGNTEAQCCLATMYHFGMGIHTNFEQAL 136
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHR 209
S Y AA G+ +G Y + V+ YQ A+ G A Y L
Sbjct: 137 SWYTLAAKAGNVQAHTYIGSMYQFGQGVQKDYQTAHDWYQKAAQKGCANAMYYLGSLYEG 196
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMY---------------------------NTSLC 242
G GV N +EA WY +A+ A Y +
Sbjct: 197 GYGVAKNTKEALTWYRASADQNNAEACYRAFRIYYYELSDAANGYNYLTRAAAQNHVGAL 256
Query: 243 YSFGE-------GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
Y GE G P+ ++AR +AAD G+ AQ+ + F E
Sbjct: 257 YELGETHYLGLLGRPVDRKKARLHYTKAADAGNAMAQMALKVRTFDE 303
>gi|307205848|gb|EFN84031.1| Protein sel-1-like protein 1 [Harpegnathos saltator]
Length = 764
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 13/215 (6%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAA 164
++ GRGV + +KA+ F A G+ +AM G +Y E + E A +++AA
Sbjct: 374 HYQGGRGVPLDHEKAVQYFQHAADAGNPVAMAFLGKIYLEGSEIVKQDNETAYKYFKKAA 433
Query: 165 VLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
LG+P GQ LG+ YL V + + A+ G V Q QL G GV +
Sbjct: 434 ELGNPVGQSGLGLMYLYGMGVERNTGKAWQYFHHAAEQGWVDGQLQLGNMYFSGIGVKRD 493
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A +++ A++ G+V A YN + ++ G G+ S A + MK A+ G QL
Sbjct: 494 YKMANKYFNLASQSGHVLAYYNLAQMHATGTGMVRSCPPAVELMKNVAERGKWSDQLMMA 553
Query: 277 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 311
+ EG++ +A + L + G A IL
Sbjct: 554 HTDYREGKVNEAFLIYALFSEMGYEVAQSNAAFIL 588
>gi|303284122|ref|XP_003061352.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457703|gb|EEH55002.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 439
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 104/267 (38%), Gaps = 75/267 (28%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY----- 160
R G ++ G GV NLD AL F K AA+G T A V G++ + ++ E A++ +
Sbjct: 71 RLGYCYQFGNGVELNLDTALAWFEKAAAKGHTGAQVGIGVVSYTKERYEDAVTWFTKAAD 130
Query: 161 -------------------------------RQAAVLGDPAGQFNLGI-SYLQE---EAV 185
+AA G GQF +G+ +Y +E EAV
Sbjct: 131 QHDTEAESWLGRCYQFGNGVEQNLDTALAWFEKAAAKGHADGQFGIGVVNYTKERYEEAV 190
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNL---------------------------- 217
+A+ G A++ L C G GV+ NL
Sbjct: 191 TWFTKAADQGESNAEFVLGDCYRFGNGVEINLDTALEWYEKAAAKGHAGAQVGIGIVNHK 250
Query: 218 ----QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+EA W+ +AA+ G A CY G G+ L+ A +W ++AA GH Q+
Sbjct: 251 KERYEEAVTWFTKAADQGIADAELRLGHCYQLGNGVELNLDTAMEWYEKAAAKGHVNGQV 310
Query: 274 EHGLGLFTEGEMMKAVVYLELATRAGE 300
G+ + + AV + T+A E
Sbjct: 311 NIGIVSYKKERYEDAVTWF---TKAAE 334
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 12/207 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G GV NLD AL+ F K AA+G A V G + + ++ E A++ + +AA G
Sbjct: 5 GDNYRNGYGVEINLDTALEWFEKAAAKGHAGAQVGIGDVNYTKERYEDAVTWFTKAADQG 64
Query: 168 DPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
D + LG Y V+L +A+ GH AQ + + + ++
Sbjct: 65 DAEAEHRLGYCYQFGNGVELNLDTALAWFEKAAAKGHTGAQVGIGVVSYTKE----RYED 120
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A W+ +AA+ A CY FG G+ + A W ++AA GH Q G+
Sbjct: 121 AVTWFTKAADQHDTEAESWLGRCYQFGNGVEQNLDTALAWFEKAAAKGHADGQFGIGVVN 180
Query: 280 FTEGEMMKAVVYLELATRAGETAADHV 306
+T+ +AV + A GE+ A+ V
Sbjct: 181 YTKERYEEAVTWFTKAADQGESNAEFV 207
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 102/269 (37%), Gaps = 72/269 (26%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ ++ G GV +NLD AL F K AA+G G++ + ++ E A++ + +AA G
Sbjct: 141 GRCYQFGNGVEQNLDTALAWFEKAAAKGHADGQFGIGVVNYTKERYEEAVTWFTKAADQG 200
Query: 168 DPAGQFNLGISYL----------------------------------------QEEAVKL 187
+ +F LG Y EEAV
Sbjct: 201 ESNAEFVLGDCYRFGNGVEINLDTALEWYEKAAAKGHAGAQVGIGIVNHKKERYEEAVTW 260
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL------ 241
+A+ G A+ +L C G GV+ NL A WY +AA G+V N +
Sbjct: 261 FTKAADQGIADAELRLGHCYQLGNGVELNLDTAMEWYEKAAAKGHVNGQVNIGIVSYKKE 320
Query: 242 --------------------------CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
CY FG G+ + A +W ++AA GH AQ
Sbjct: 321 RYEDAVTWFTKAAEQHDADAERWLGHCYRFGNGVEQNFDTALEWYEKAAAKGHAGAQYGI 380
Query: 276 GLGLFTEGEMMKAVVYLELATRAGETAAD 304
G+ + + +AV + A G+T A+
Sbjct: 381 GIVNYKKERYEEAVTWFTKAAAQGDTDAE 409
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 40/165 (24%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
LR G ++ G GV NLD A++ + K AA+G V+ G++ ++ ++ E A++ + +AA
Sbjct: 274 LRLGHCYQLGNGVELNLDTAMEWYEKAAAKGHVNGQVNIGIVSYKKERYEDAVTWFTKAA 333
Query: 165 VLGDP------------------------------------AGQFNLGISYLQ----EEA 184
D Q+ +GI + EEA
Sbjct: 334 EQHDADAERWLGHCYRFGNGVEQNFDTALEWYEKAAAKGHAGAQYGIGIVNYKKERYEEA 393
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
V +A+ G A+ L C +GRGV ++ +A WY +AAE
Sbjct: 394 VTWFTKAAAQGDTDAEVHLGDCYRKGRGVTRDIPKAIEWYTKAAE 438
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 32/137 (23%)
Query: 200 QYQLALCLHRGRGVDFNL--------------------------------QEAARWYLRA 227
+Y + G GV+ NL ++A W+ +A
Sbjct: 1 EYSIGDNYRNGYGVEINLDTALEWFEKAAAKGHAGAQVGIGDVNYTKERYEDAVTWFTKA 60
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
A+ G A + CY FG G+ L+ A W ++AA GH AQ+ G+ +T+
Sbjct: 61 ADQGDAEAEHRLGYCYQFGNGVELNLDTALAWFEKAAAKGHTGAQVGIGVVSYTKERYED 120
Query: 288 AVVYLELATRAGETAAD 304
AV + A +T A+
Sbjct: 121 AVTWFTKAADQHDTEAE 137
>gi|118588352|ref|ZP_01545761.1| hypothetical protein SIAM614_23762 [Stappia aggregata IAM 12614]
gi|118439058|gb|EAV45690.1| hypothetical protein SIAM614_23762 [Stappia aggregata IAM 12614]
Length = 394
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
G GV + KA D F + A G+ A+ + L+Y E D+K++ L QAA L D
Sbjct: 185 GTGVEVDKKKAADLFEEAANAGNASALYNLALLYQEGEGRPFDEKKSR-ELLEQAAKLND 243
Query: 169 PAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P Q+ LG+SYL+ + L +A+ GH AQ + +G+GVD N EA
Sbjct: 244 PEAQYALGLSYLEAQTGLNDPGLGAFWLGRAARRGHTSAQVYYGILRFQGKGVDPNEAEA 303
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
A W+ RAA G AM + Y++G G
Sbjct: 304 ADWFERAATAGNPVAMNRLARVYAYGRG 331
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%)
Query: 175 LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
LGI + +A A+ G + QLA G GV+ + ++AA + AA G
Sbjct: 150 LGIHQDKAKAADWYSLAAAKGDTGSAMQLAQLYLLGTGVEVDKKKAADLFEEAANAGNAS 209
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
A+YN +L Y GEG P +++R+ +++AA +AQ GL
Sbjct: 210 ALYNLALLYQEGEGRPFDEKKSRELLEQAAKLNDPEAQYALGL 252
>gi|392541255|ref|ZP_10288392.1| hypothetical protein PpisJ2_05417 [Pseudoalteromonas piscicida JCM
20779]
Length = 564
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYR 161
+ G ++ G+GV ++ +KA+ + A +G + GLMY + E A Y+
Sbjct: 29 KLGVIYEQGKGVAQSDEKAVKYYQLAAEQGDACGQCNLGLMYEQGKGVAQSDEKAAEYYQ 88
Query: 162 QAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA G+ GQ NLG+ Y E+AV+ A+ G+VR Q L L +G+GV
Sbjct: 89 LAAEQGNAWGQCNLGVMYEYGQGVAQSDEKAVEYYQLAAEQGNVRGQCNLGLMYEQGKGV 148
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ ++A +Y AA G A N Y FG G+ SH +A K+ AA G +AQL
Sbjct: 149 AQSDKKAVEYYQLAAAQGDADAQCNLGYMYDFGRGVKKSHTEANKYYLLAAKKGDNRAQL 208
Query: 274 EHGLGLFTEGEMMK 287
F GE +K
Sbjct: 209 NLAYSYFF-GEGVK 221
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+K L + + +G A +L + +G+GV + ++A ++Y AAE G N L Y
Sbjct: 12 IKALIEKAQSGDADAHCKLGVIYEQGKGVAQSDEKAVKYYQLAAEQGDACGQCNLGLMYE 71
Query: 245 FGEGLPLSHRQARKWMKRAADCGH--GKAQL----EHGLGLFTEGEMMKAVVYLELATRA 298
G+G+ S +A ++ + AA+ G+ G+ L E+G G+ E KAV Y +LA
Sbjct: 72 QGKGVAQSDEKAAEYYQLAAEQGNAWGQCNLGVMYEYGQGVAQSDE--KAVEYYQLAAEQ 129
Query: 299 G 299
G
Sbjct: 130 G 130
>gi|419798038|ref|ZP_14323481.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|385696379|gb|EIG26868.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 267
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 52/214 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G GV ++ +A+ + K A +G+ A + GL+Y D +AA YR+
Sbjct: 48 GVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGLLYANDSSNHQDYAQAA-EWYRK 106
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------------------------------- 189
AA G P+ Q NLG Y + V+ Y
Sbjct: 107 AAEQGHPSAQNNLGAMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQNNLGVMYEKGQGVR 166
Query: 190 -----------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+A+ G AQ+ L L GRGV + +AA W+ +AAE G A +N
Sbjct: 167 QDYARAVEWFLKAAEQGTATAQFNLGLMYETGRGVRQDYAQAAGWFRKAAEQGDAYAQHN 226
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+L Y+FG G+P ++ A++W+ +A C +G Q
Sbjct: 227 LALMYAFGRGVPQNYTIAKEWLGKA--CTNGDQQ 258
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 129 LKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE-- 182
L+ A RG+ A + G+MY + A+ YR+AA G Q+NLG+ Y +
Sbjct: 33 LQAAERGNVKAQNNLGVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGLLYANDSS 92
Query: 183 ------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+A + +A+ GH AQ L G+GV + +A WY ++A+ GY A
Sbjct: 93 NHQDYAQAAEWYRKAAEQGHPSAQNNLGAMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQ 152
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVY 291
N + Y G+G+ + +A +W +AA+ G AQ GL ++ G + +A +
Sbjct: 153 NNLGVMYEKGQGVRQDYARAVEWFLKAAEQGTATAQFNLGL-MYETGRGVRQDYAQAAGW 211
Query: 292 LELATRAGETAADH 305
A G+ A H
Sbjct: 212 FRKAAEQGDAYAQH 225
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
QA+ G+V+AQ L + +G GV + +A +WY +AAE G A YN L Y+
Sbjct: 34 QAAERGNVKAQNNLGVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGLLYANDSSN 93
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAAD 304
+ QA +W ++AA+ GH AQ G ++ G + ++A+ + + + G A
Sbjct: 94 HQDYAQAAEWYRKAAEQGHPSAQNNLG-AMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQ 152
Query: 305 HVKNVILQQLSATSRDRAMLV 325
+ V+ ++ +D A V
Sbjct: 153 NNLGVMYEKGQGVRQDYARAV 173
>gi|344924771|ref|ZP_08778232.1| hypothetical protein COdytL_09001 [Candidatus Odyssella
thessalonicensis L13]
Length = 1945
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 23/221 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + G+GV+++ KA++ + K A + + A + G+ Y E A +A
Sbjct: 1324 GAMYGKGQGVKQDDTKAIEWYTKAAQQENAGAQYNLGVSYLSGQGIEQNYGNAFYWLTKA 1383
Query: 164 AVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+ LG+ YL+ + +K L QA+ G+ AQ L L GRG +
Sbjct: 1384 AEQGIADAQYTLGLMYLKGQGIKQDDTRAKDLFIQAAEQGNADAQNNLGLMYANGRGTEQ 1443
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE- 274
+ +A W +AA+ V A + L Y+ G G+ + A W+ AA G AQL
Sbjct: 1444 DYAKAIYWLGKAAQQRNVNAQFMLGLMYASGRGVEQDYTNAAYWLGEAAQQGDPDAQLRL 1503
Query: 275 -----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
+GLG+ GE KA+ +L TRAGE +N +
Sbjct: 1504 GFMHLNGLGVDMNGE--KAIDWL---TRAGEQGNLEAQNSL 1539
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 15/193 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +GRG ++ KA+ K A + + A GLMY E D AA L +
Sbjct: 1432 GLMYANGRGTEQDYAKAIYWLGKAAQQRNVNAQFMLGLMYASGRGVEQDYTNAAYWL-GE 1490
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GDP Q LG +L E+A+ L +A G++ AQ L+L G+GV
Sbjct: 1491 AAQQGDPDAQLRLGFMHLNGLGVDMNGEKAIDWLTRAGEQGNLEAQNSLSLMYLNGQGVK 1550
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +AA W++ AA+ G A + Y G G+ QA W +A + G+ AQL
Sbjct: 1551 QDDTKAAYWFIAAAQQGDSDAQFRLGFMYLNGRGVGKDEDQAIVWFLKAVEQGNAYAQLN 1610
Query: 275 HGLGLFTEGEMMK 287
GL ++ G+ +K
Sbjct: 1611 LGL-MYANGQSVK 1622
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLA 204
++ AI LY +AA G+ + Q NLG+ Y+ + V L +A+ G+ AQ L
Sbjct: 1265 EDKAIRLYTKAAEQGNASAQSNLGLMYMNGQGVDKDDTKAAYWLAKAAKQGNAFAQTNLG 1324
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G+GV + +A WY +AA+ A YN + Y G+G+ ++ A W+ +AA
Sbjct: 1325 AMYGKGQGVKQDDTKAIEWYTKAAQQENAGAQYNLGVSYLSGQGIEQNYGNAFYWLTKAA 1384
Query: 265 DCGHGKAQLEHGLGLFTEGEMMK 287
+ G AQ GL ++ +G+ +K
Sbjct: 1385 EQGIADAQYTLGL-MYLKGQGIK 1406
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAIS 158
VLL G + +G G +N ++A + K A + G MY E + + A+
Sbjct: 1757 VLL--GNLYLNGWGTVQNYEEAFKWYKKVADQEGAEGQAQVGGMYKEGWGVLQDLQEALQ 1814
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKL-----------LYQASIAGHVRA--QYQLAL 205
++AA D GQ+ L + Y E ++ + S+ +RA QY L
Sbjct: 1815 WIQKAATQNDQTGQYYLALLYRDGEGIQSNDAYALDGLRNAAKQSVRADIRASAQYTLGW 1874
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
GRGVD +L+EA++WY A G A+Y+ Y +G + L+ A +W K+AA+
Sbjct: 1875 MYENGRGVDKDLEEASKWYKLAERGCPAHALYSLGRMYEYGLNVDLNLGTAIEWYKKAAE 1934
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQAAVL 166
+ +G+GV+++ KA F+ A +G + A G MY ++ AI + +A
Sbjct: 1543 YLNGQGVKQDDTKAAYWFIAAAQQGDSDAQFRLGFMYLNGRGVGKDEDQAIVWFLKAVEQ 1602
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q NLG+ Y ++VK Y +I G+ AQ+ LAL +G GV+ N
Sbjct: 1603 GNAYAQLNLGLMYANGQSVKRDYAEAINLYTMSAEQGNACAQFSLALMYEKGEGVEQNEA 1662
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
A Y +AA+ G A + + Y + + + +A W + A+ G+ AQ G
Sbjct: 1663 RAIEIYNKAAQQGLESAQTHLAEMYLYAQREKQDYVKATYWFTKLAEQGNADAQYHLG 1720
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISL 159
LR G +G GV N +KA+D + +G+ A LMY + D +AA
Sbjct: 1501 LRLGFMHLNGLGVDMNGEKAIDWLTRAGEQGNLEAQNSLSLMYLNGQGVKQDDTKAAY-W 1559
Query: 160 YRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+ AA GD QF LG YL +++A+ +A G+ AQ L L G+
Sbjct: 1560 FIAAAQQGDSDAQFRLGFMYLNGRGVGKDEDQAIVWFLKAVEQGNAYAQLNLGLMYANGQ 1619
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
V + EA Y +AE G A ++ +L Y GEG+ + +A + +AA G A
Sbjct: 1620 SVKRDYAEAINLYTMSAEQGNACAQFSLALMYEKGEGVEQNEARAIEIYNKAAQQGLESA 1679
Query: 272 Q 272
Q
Sbjct: 1680 Q 1680
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 19/222 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + GRGV ++ A + A +G A + G M+ +D E AI +A
Sbjct: 1468 GLMYASGRGVEQDYTNAAYWLGEAAQQGDPDAQLRLGFMHLNGLGVDMNGEKAIDWLTRA 1527
Query: 164 AVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRGVDF 215
G+ Q +L + YL + VK A+ G AQ++L GRGV
Sbjct: 1528 GEQGNLEAQNSLSLMYLNGQGVKQDDTKAAYWFIAAAQQGDSDAQFRLGFMYLNGRGVGK 1587
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A W+L+A E G A N L Y+ G+ + + +A +A+ G+ AQ
Sbjct: 1588 DEDQAIVWFLKAVEQGNAYAQLNLGLMYANGQSVKRDYAEAINLYTMSAEQGNACAQFSL 1647
Query: 276 GLGLFTEGEMMK------AVVYLELATRAGETAADHVKNVIL 311
L ++ +GE ++ +Y + A + E+A H+ + L
Sbjct: 1648 AL-MYEKGEGVEQNEARAIEIYNKAAQQGLESAQTHLAEMYL 1688
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-A 156
A L G + +G+ V+++ +A++ + A +G+ A LMY + +++ EA A
Sbjct: 1605 AYAQLNLGLMYANGQSVKRDYAEAINLYTMSAEQGNACAQFSLALMYEKGEGVEQNEARA 1664
Query: 157 ISLYRQAAVLGDPAGQFNLGISYL-----QEEAVKLLY---QASIAGHVRAQYQLALCLH 208
I +Y +AA G + Q +L YL +++ VK Y + + G+ AQY L
Sbjct: 1665 IEIYNKAAQQGLESAQTHLAEMYLYAQREKQDYVKATYWFTKLAEQGNADAQYHLGQMDL 1724
Query: 209 RGRGVDFNLQEAARWYLRAAEGGY-VRAMYNTSL---CYSFGEGLPLSHRQARKWMKRAA 264
G G+ NL++A + + +A + + Y+ L Y G G ++ +A KW K+ A
Sbjct: 1725 NGWGITKNLEKAYKRFGKAVQTAMRSESKYDQVLLGNLYLNGWGTVQNYEEAFKWYKKVA 1784
Query: 265 DCGHGKAQLEHGLGLFTEG 283
D + Q + G G++ EG
Sbjct: 1785 DQEGAEGQAQVG-GMYKEG 1802
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
EA W L+ A+ Y +CY +G +PLSH++A KW+ RAA+ G+
Sbjct: 1195 EALEWLLKIAKQSNSSVQYAIGVCYYYGHWVPLSHKRALKWLTRAAEQGN 1244
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
EA++ L + + + QY + +C + G V + + A +W RAAE G + A+
Sbjct: 1195 EALEWLLKIAKQSNSSVQYAIGVCYYYGHWVPLSHKRALKWLTRAAEQGNLDALSILGYI 1254
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 298
+ GEG +A + +AA+ G+ AQ GL G + + KA +L A +
Sbjct: 1255 CATGEGAAKDEDKAIRLYTKAAEQGNASAQSNLGLMYMNGQGVDKDDTKAAYWLAKAAKQ 1314
Query: 299 GETAA 303
G A
Sbjct: 1315 GNAFA 1319
>gi|440225478|ref|YP_007332569.1| peptidoglycan-binding domain-containing protein [Rhizobium tropici
CIAT 899]
gi|440036989|gb|AGB70023.1| peptidoglycan-binding domain-containing protein [Rhizobium tropici
CIAT 899]
Length = 1228
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLL-------YQASI-AGHVRAQYQLALCLHRGRGVD 214
AA DP F++G Y V YQ S G+ AQY+LA +G GVD
Sbjct: 958 AAKSADPVALFSIGARYTDGRGVAADMKQAASWYQLSADKGYAPAQYRLASMYEKGNGVD 1017
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+L +A ++Y +AA G AM+N ++ Y+ G P + A W RAAD G +Q
Sbjct: 1018 RDLVKAKQYYEQAANQGNASAMHNLAVLYASGTAGPQDYNSAANWFIRAADLGVSDSQFN 1077
Query: 275 HGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
+ L+ G ++ ++ + +A ++G+ A ++ + + + A VD W
Sbjct: 1078 LAI-LYARGNGVKQDLQESYKWFAIAAKSGDKDAAQKRDEVANAMKPADLENARAKVDLW 1136
Query: 330 RAMPS 334
+ P+
Sbjct: 1137 KVQPA 1141
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----A 155
+ + L G R+ GRGV ++ +A + A +G A MY + + +
Sbjct: 963 DPVALFSIGARYTDGRGVAADMKQAASWYQLSADKGYAPAQYRLASMYEKGNGVDRDLVK 1022
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCL 207
A Y QAA G+ + NL + Y A Y ++ +RA Q+ LA+
Sbjct: 1023 AKQYYEQAANQGNASAMHNLAVLYASGTAGPQDYNSAANWFIRAADLGVSDSQFNLAILY 1082
Query: 208 HRGRGVDFNLQEAARWYLRAAEGG 231
RG GV +LQE+ +W+ AA+ G
Sbjct: 1083 ARGNGVKQDLQESYKWFAIAAKSG 1106
>gi|375000419|ref|ZP_09724759.1| Sel1 repeat protein [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353075107|gb|EHB40867.1| Sel1 repeat protein [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
Length = 331
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
GK ++ G GV KN A + + A +G A + MYW+ + L Y ++
Sbjct: 143 GKMYEGGDGVEKNHQLAFYWYKQAALQGDATAQENLADMYWDGRGTTKNLRLATLWYLRS 202
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A+ + QF LG +Y + E VK YQ A+ G A + +G GV+
Sbjct: 203 ALQDEVHSQFQLGCAYSEGEGVKQDYQQAMHWYQQAAAQGDSNAYVNIGWMYKQGHGVER 262
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +EA W+ RAAE G V A YN Y G G + +QA W ++ G
Sbjct: 263 DDEEALSWFHRAAEAGNVTAWYNLGFMYRDGRGTAVDVKQALYWFQKVQPTG 314
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 88/215 (40%), Gaps = 22/215 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G R+ K+ KA K A +G LA D G W ++ + A+ Y
Sbjct: 71 GLRYSDTPTSMKDNAKASYWLEKAAKQGHKLAPNDLG---WVLEGETGSEPDYAQAVFWY 127
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRG 212
R G Q NLG Y + V+ +Q A++ G AQ LA GRG
Sbjct: 128 RVGTERGHSYAQNNLGKMYEGGDGVEKNHQLAFYWYKQAALQGDATAQENLADMYWDGRG 187
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
NL+ A WYLR+A V + + YS GEG+ ++QA W ++AA G A
Sbjct: 188 TTKNLRLATLWYLRSALQDEVHSQFQLGCAYSEGEGVKQDYQQAMHWYQQAAAQGDSNAY 247
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
+ G G E + +A+ + A AG A
Sbjct: 248 VNIGWMYKQGHGVERDDEEALSWFHRAAEAGNVTA 282
>gi|123492730|ref|XP_001326130.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909040|gb|EAY13907.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 2444
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQAAVLGDP 169
G GVR+N D A F A +G+ ++ + GLM + MDK AA + +AA+ G+
Sbjct: 2222 GIGVRRNYDTAAKYFKMAAEKGNIYSLNNIGLMLRKGTGMDKDPVAAAQYFEKAAISGEV 2281
Query: 170 AGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
+NL Y E AV+L+ A+ G+V+A Q A G+ V NL+EAA
Sbjct: 2282 DAMYNLATMYYNGEGIKRDRRKAVQLIKMAADRGNVKAIVQFASFCKHGKLVKQNLEEAA 2341
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL---- 277
++Y A + + L G G+ + +A K +K +AD G+ A + +
Sbjct: 2342 KYYRMATQKDSAKGELMYGLMLKNGTGVDQNLDKAAKHLKHSADKGNADAMMYYAQMAQK 2401
Query: 278 GLFTEGEMMKAVVYLELATRAGETAA 303
G T+ ++++A Y ++A G T A
Sbjct: 2402 GQGTKKDLVQAAFYYKMAADKGNTRA 2427
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYR 161
+G K+G GV KN A F A +G+ + M E D K+A + Y+
Sbjct: 202 YGICLKNGYGVPKNARLAAKYFQMAAEQGNPEGQNNYAWMLKNGCGIEKDSKKA-VEYYK 260
Query: 162 QAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+A + G NL G+ EEA +L Q++ G+ AQ L G GV
Sbjct: 261 LSAEQMNTNGMNNLATMLCAGIGVEQNIEEAAQLFKQSADQGNQYAQNNYGYMLDNGIGV 320
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ ++ A+++Y +A G A +N +L + G G+P++ +A ++MK +AD G+ A+
Sbjct: 321 ERDIVLASKYYKLSASAGNNDAEFNLALLFKNGSGIPMNKYEAARYMKLSADSGNADARF 380
Query: 274 EHG 276
+G
Sbjct: 381 TYG 383
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166
+G K+G GV+K++ A F A +G+ L M + LM
Sbjct: 2179 YGIILKNGLGVKKDVILAAKYFKMSADQGNALGMNNYALMCCS----------------- 2221
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
+G+ + A K A+ G++ + + L L +G G+D + AA+++ +
Sbjct: 2222 -------GIGVRRNYDTAAKYFKMAAEKGNIYSLNNIGLMLRKGTGMDKDPVAAAQYFEK 2274
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTE 282
AA G V AMYN + Y GEG+ R+A + +K AAD G+ KA ++ G +
Sbjct: 2275 AAISGEVDAMYNLATMYYNGEGIKRDRRKAVQLIKMAADRGNVKAIVQFASFCKHGKLVK 2334
Query: 283 GEMMKAVVYLELATRAGETAADHVKNVILQ 312
+ +A Y +AT+ + + ++L+
Sbjct: 2335 QNLEEAAKYYRMATQKDSAKGELMYGLMLK 2364
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Q G+ E A + L ++ G+ AQY +A+ L G GV+ ++ EAA++Y AA+
Sbjct: 2075 AQHGYGMEQDNEMAERYLRMSADNGNSEAQYNIAVMLEEGDGVNKDISEAAKYYKMAADN 2134
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMM 286
G A +N L G+G+ +A + K AD G + Q +G+ GL + +++
Sbjct: 2135 GNFLAQFNYGLLLQKGQGVAKDLERAAYYTKLCADIGDAEGQNNYGIILKNGLGVKKDVI 2194
Query: 287 KAVVYLELATRAG 299
A Y +++ G
Sbjct: 2195 LAAKYFKMSADQG 2207
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQE-----EAVKLLYQASIAGHVRAQYQLALCLH 208
E AI L+++AA G+ G + G+ YL+E EA K A+ H+ QY+LA L+
Sbjct: 601 EEAIKLFKEAADQGNAEGAYKYGM-YLKEKGEYPEAAKYFGIAANLNHIEGQYELASALN 659
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
GRGVDF+ +EA ++ AA+ + + + L G G + ++ K++ AA G+
Sbjct: 660 AGRGVDFDGEEAQYYFKEAADQEHNISQFLYGLLMDTGCGGEVDQDESTKYVLMAAGNGN 719
Query: 269 GKAQ 272
+A+
Sbjct: 720 EEAR 723
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 20/220 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEM---DKKEA 155
EA R G + G GV+K K + + A + + A D A L+ + + K+
Sbjct: 51 EAHAKHRLGLLYMKGIGVKKKTQKGCELIKQSAEQNNEDAYPDYADLLLHGIHFKENKQL 110
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A++ YR +A G+ F +G+ EA+K + G +Q AL L
Sbjct: 111 ALNYYRLSAENGNVEAMFQIGMMLKNGIGVEQNYPEALKYYKMGAEKGDPLSQNNYALML 170
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G G N EA +++L AA A + +C G G+P + R A K+ + AA+ G
Sbjct: 171 KQGLGTKKNKAEAIKYFLLAANQNEPNAQNSYGICLKNGYGVPKNARLAAKYFQMAAEQG 230
Query: 268 HGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGET 301
+ + Q L++G G+ E + KAV Y +L+ T
Sbjct: 231 NPEGQNNYAWMLKNGCGI--EKDSKKAVEYYKLSAEQMNT 268
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 86/349 (24%), Positives = 137/349 (39%), Gaps = 46/349 (13%)
Query: 15 FTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHDFASLPFDVLNKIAA 74
F A IT+ N +PE+TA R I++ R R+ S + L LN
Sbjct: 1957 FDASNLSITQDINMQPEITAETRSMEIEKVHR----RAANSGDSGAQVKLAIIKLNSGER 2012
Query: 75 SFTLPQLR--------AASLVCKSWN----DALRPLREAMVLLR--------------WG 108
L LR AA + K ++ D + +RE R +G
Sbjct: 2013 QEALDLLRIAAENDNEAAEFMLKKFSQEDCDDEQAMRETAEYFRKLADDDNDIDAQYIFG 2072
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQAA 164
+HG G+ ++ + A A G++ A + +M E D IS Y+ AA
Sbjct: 2073 FMAQHGYGMEQDNEMAERYLRMSADNGNSEAQYNIAVMLEEGDGVNKDISEAAKYYKMAA 2132
Query: 165 VLGDPAGQFNLGISYLQEEAV-KLLYQASI-------AGHVRAQYQLALCLHRGRGVDFN 216
G+ QFN G+ + + V K L +A+ G Q + L G GV +
Sbjct: 2133 DNGNFLAQFNYGLLLQKGQGVAKDLERAAYYTKLCADIGDAEGQNNYGIILKNGLGVKKD 2192
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ AA+++ +A+ G M N +L G G+ ++ A K+ K AA+ G+ + G
Sbjct: 2193 VILAAKYFKMSADQGNALGMNNYALMCCSGIGVRRNYDTAAKYFKMAAEKGNIYSLNNIG 2252
Query: 277 L----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
L G + + + A Y E A +GE A + + RDR
Sbjct: 2253 LMLRKGTGMDKDPVAAAQYFEKAAISGEVDAMYNLATMYYNGEGIKRDR 2301
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
K+G G+ K+ KA++ + A + +T M + M E + +EAA L++Q+A
Sbjct: 242 LKNGCGIEKDSKKAVEYYKLSAEQMNTNGMNNLATMLCAGIGVEQNIEEAA-QLFKQSAD 300
Query: 166 LGDPAGQFNLGISYLQEEAV----------KLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
G+ Q N G Y+ + + K ++ AG+ A++ LAL G G+
Sbjct: 301 QGNQYAQNNYG--YMLDNGIGVERDIVLASKYYKLSASAGNNDAEFNLALLFKNGSGIPM 358
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N EAAR+ +A+ G A + GEG R A ++++ A + + H
Sbjct: 359 NKYEAARYMKLSADSGNADARFTYGNMLQSGEGCTKDERIAEEYIQLAVNESADSRFISH 418
Query: 276 GL-----GLFTEGEMMKAV 289
G+ GL + E ++ V
Sbjct: 419 GVFASGPGLSQQKEAIRGV 437
Score = 42.7 bits (99), Expect = 0.26, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EEA+KL +A+ G+ Y+ + L + +G EAA+++ AA ++ Y +
Sbjct: 601 EEAIKLFKEAADQGNAEGAYKYGMYL-KEKG---EYPEAAKYFGIAANLNHIEGQYELAS 656
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 297
+ G G+ +A+ + K AAD H +Q +GL G E + ++ Y+ +A
Sbjct: 657 ALNAGRGVDFDGEEAQYYFKEAADQEHNISQFLYGLLMDTGCGGEVDQDESTKYVLMAAG 716
Query: 298 AG-ETAADHV 306
G E A DH+
Sbjct: 717 NGNEEARDHL 726
>gi|118350855|ref|XP_001008706.1| sel1 repeat protein [Tetrahymena thermophila]
gi|89290473|gb|EAR88461.1| sel1 repeat protein [Tetrahymena thermophila SB210]
Length = 287
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G+G+ ++L+KA++ + K A +G + G +Y++ + AI Y A+
Sbjct: 41 LEEGKGIEQDLEKAIEWYTKSAEKGEAKSQYCLGNLYYQGAAVQQNFQEAIKWYNLASKQ 100
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQ 218
G F LG+ + + K +Q I G+ A L G GV N +
Sbjct: 101 GHDKALFQLGLMQIFGQGFKQDFQKGIDYFKKSGERGNQDAYNNLGNMYREGTGVKVNYE 160
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
EA ++YL A EG AM N + Y G G+ S+ +A K+ K+AAD G AQ G
Sbjct: 161 EAVKYYLMACEGECAAAMANLATLYIQGLGVNQSYEEAAKYFKKAADLGLDIAQFNLGC- 219
Query: 279 LFTEGEMMKAVVY--LELATRAGETAADHVKNVI 310
L+ EG+ +K + LE + GE ++
Sbjct: 220 LYEEGKGVKKDLQMALEYYRKGGENGNQEAEDAF 253
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E A + Y + G AQY + L L G+G++ +L++A WY ++AE G ++ Y
Sbjct: 16 EAAARYYYTLANKGDPYAQYVIGLLLEEGKGIEQDLEKAIEWYTKSAEKGEAKSQYCLGN 75
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL-GLFTEG---EMMKAVVYLELA-T 296
Y G + + ++A KW A+ GH KA + GL +F +G + K + Y + +
Sbjct: 76 LYYQGAAVQQNFQEAIKWYNLASKQGHDKALFQLGLMQIFGQGFKQDFQKGIDYFKKSGE 135
Query: 297 RAGETAADHVKNV 309
R + A +++ N+
Sbjct: 136 RGNQDAYNNLGNM 148
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 15/176 (8%)
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQAS 192
+D L + EAA Y A GDP Q+ + GI E+A++ +++
Sbjct: 3 LDEALKTQKFKSDEAAARYYYTLANKGDPYAQYVIGLLLEEGKGIEQDLEKAIEWYTKSA 62
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
G ++QY L ++G V N QEA +WY A++ G+ +A++ L FG+G
Sbjct: 63 EKGEAKSQYCLGNLYYQGAAVQQNFQEAIKWYNLASKQGHDKALFQLGLMQIFGQGFKQD 122
Query: 253 HRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAA 303
++ + K++ + G+ A G ++ EG +K AV Y +A GE AA
Sbjct: 123 FQKGIDYFKKSGERGNQDAYNNLG-NMYREGTGVKVNYEEAVKYYLMACE-GECAA 176
>gi|404487140|ref|ZP_11022327.1| hypothetical protein HMPREF9448_02788 [Barnesiella intestinihominis
YIT 11860]
gi|404335636|gb|EJZ62105.1| hypothetical protein HMPREF9448_02788 [Barnesiella intestinihominis
YIT 11860]
Length = 1892
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 16/208 (7%)
Query: 108 GKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQ 162
G+ + +G G R+++ +A+ + GA + GL+Y E D + A Y++
Sbjct: 864 GEYYYYGSFGCRRDMKEAIKWYEMGAKSNEPTCVFTLGLIYEEGDGVQKNILKAADWYQK 923
Query: 163 AAVLGDPAGQFNLG-------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G P+ +NLG IS +E+ L+ QA+ +G+ AQ + G V+
Sbjct: 924 GAQAGIPSCLYNLGKLIINKEISGEEEKGFNLIQQAAESGYSFAQNYMGRAYRFGWYVNA 983
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N A W+ +AAE AM N YS+ +GL + + +A W K+AA+ H +A E
Sbjct: 984 NPVRATNWFTKAAEQNMPDAMCNLGDMYSYEDGLTIDYEKAFYWYKKAAETKHSRALTEL 1043
Query: 276 G----LGLFTEGEMMKAVVYLELATRAG 299
G G + KA+ Y + A G
Sbjct: 1044 GDMYYAGKGVRQDYQKAMEYYQKACDEG 1071
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 13/189 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEAAISLYRQA 163
G + +GRG+ N KAL+ + K AA S + G +YW E+ E A+ ++A
Sbjct: 1562 GDMYFYGRGMAINQAKALELYKKAAALDSVYGFFNVGFLYWNGPEEIQDPEQALQYLKKA 1621
Query: 164 AVLGDPAGQFNLGISYLQ--EEAV-----KLLYQASI-AGHVRAQYQLALCLHRGRGVDF 215
+G +G Y EE + K YQ + + A +AL G+GV
Sbjct: 1622 VQMGYTYALSFIGDIYRTGPEELIDYAEAKRYYQKGVDVNEINAIKGMALLYLLGQGVTQ 1681
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N A + +AA+ G AMY+ Y +GEG+P + + A +++ A D + A
Sbjct: 1682 NNAMGAFYLKKAADKGNAWAMYHLGRLYYYGEGIPRNPKLALDYLQMAYDANYPDACSLL 1741
Query: 276 GLGLFTEGE 284
GL L+ GE
Sbjct: 1742 GL-LYERGE 1749
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 15/183 (8%)
Query: 131 GAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ 190
G + A +D G+ + ++K E+AI+ AA +G+ +LG Y V Y+
Sbjct: 747 GMTESLSKAFLDRGINLYNIEKYESAIAPLLLAAQMGESEAATHLGDLYFYGHGVDTDYE 806
Query: 191 --------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
A+ + + AQY +A +G+ V+ + + +W AAE GY A N
Sbjct: 807 QSYYWFAKAAQSNNAYAQYSIAFMYIKGQFVEKDDTQVIKWMKLAAENGYTEAQKNMGEY 866
Query: 243 YSFGE-GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELAT 296
Y +G G ++A KW + A GL ++ EG+ ++KA + +
Sbjct: 867 YYYGSFGCRRDMKEAIKWYEMGAKSNEPTCVFTLGL-IYEEGDGVQKNILKAADWYQKGA 925
Query: 297 RAG 299
+AG
Sbjct: 926 QAG 928
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 47/228 (20%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM 150
W + E + G ++ G GV+KN+ KA D + KGA G + + G +
Sbjct: 884 WYEMGAKSNEPTCVFTLGLIYEEGDGVQKNILKAADWYQKGAQAGIPSCLYNLGKLIINK 943
Query: 151 D---KKEAAISLYRQAAVLGD------------------------------------PAG 171
+ ++E +L +QAA G P
Sbjct: 944 EISGEEEKGFNLIQQAAESGYSFAQNYMGRAYRFGWYVNANPVRATNWFTKAAEQNMPDA 1003
Query: 172 QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
NLG Y E+ + + Y+ A+ H RA +L + G+GV + Q+A +
Sbjct: 1004 MCNLGDMYSYEDGLTIDYEKAFYWYKKAAETKHSRALTELGDMYYAGKGVRQDYQKAMEY 1063
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
Y +A + GY A Y+ Y G+G +A++++ +AA G+ A
Sbjct: 1064 YQKACDEGYPYAFYSLGFMYWKGQGTLPDKEKAQEYLSQAAAMGNESA 1111
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Query: 146 MYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLAL 205
+ +E KEA ++ A L +N+ E A+ L A+ G A L
Sbjct: 737 LRFETSGKEAGMTESLSKAFLDRGINLYNI---EKYESAIAPLLLAAQMGESEAATHLGD 793
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G GVD + +++ W+ +AA+ A Y+ + Y G+ + Q KWMK AA+
Sbjct: 794 LYFYGHGVDTDYEQSYYWFAKAAQSNNAYAQYSIAFMYIKGQFVEKDDTQVIKWMKLAAE 853
Query: 266 CGHGKAQLEHG----LGLF-TEGEMMKAVVYLELATRAGE 300
G+ +AQ G G F +M +A+ + E+ ++ E
Sbjct: 854 NGYTEAQKNMGEYYYYGSFGCRRDMKEAIKWYEMGAKSNE 893
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 22/226 (9%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST-LAMVDAGLMYWEMDKKEA-- 155
++ LL G ++ G GV N+D A + + A + T +A G Y ++ E+
Sbjct: 1272 KDTDTLLHIGLIYESGLGVPLNIDLARRYYERAAEQDETGMAYNFLGGTYMNDEETESNE 1331
Query: 156 --AISLYRQAAVLGDPAGQFNL---------GISYLQEEAVKLLYQASIAGHVRAQYQLA 204
A+ +++A LG+ F + G+ ++LL +AS G+ +A Y+L
Sbjct: 1332 RKAVHYFQKAIELGNTNAMFRISYYLHNGKGGLQVDIPREIELLTEASKRGNHQATYRLG 1391
Query: 205 LCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
L G+ NL+ + +++ AA+ G + A+ Y FGE +P + +A A
Sbjct: 1392 LLFEDNESGMAQNLELSVKYFQLAADNGILAAINKMGELYLFGEVIPANLTKAISCFTAA 1451
Query: 264 ADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAA 303
++ G+GKA G+G E + KA+ Y A G A
Sbjct: 1452 SEQGYGKASYWLGRLHTDGIGQL-EKDTQKAMNYYRKAIEQGYEEA 1496
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 13/193 (6%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE- 149
W + + L G + G+GVR++ KA++ + K G A G MYW+
Sbjct: 1027 WYKKAAETKHSRALTELGDMYYAGKGVRQDYQKAMEYYQKACDEGYPYAFYSLGFMYWKG 1086
Query: 150 ---MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALC 206
+ KE A QAA +G+ + L + E K + + ++ AQ LA
Sbjct: 1087 QGTLPDKEKAQEYLSQAAAMGNESAFQLLNRMDHESEEEKDIDPFARQAYLEAQQALA-- 1144
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
D ++ ++A GYV+A+ + Y GE P +A ++ +A+
Sbjct: 1145 -------DKETEKYINLLSQSANLGYVQALNDLGDLYFNGELAPKHMGKAYEYFLKASQN 1197
Query: 267 GHGKAQLEHGLGL 279
G G G L
Sbjct: 1198 GSGYGSYSCGFIL 1210
Score = 47.8 bits (112), Expect = 0.008, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 12/184 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAA 156
A + G+ + +G G+ +N ALD A GL+Y + E A
Sbjct: 1699 AWAMYHLGRLYYYGEGIPRNPKLALDYLQMAYDANYPDACSLLGLLYERGEGTAPNIELA 1758
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLH 208
LY + LGD + L +YL + A KL QA G+ A+ LA +
Sbjct: 1759 NKLYIRGHELGDDQSMWYLACNYLDGNGLPKDYKRAEKLFIQAIERGNEPARIDLARMIF 1818
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G G + Q+A E GY RA Y G G+ ++QA++ ++A D G+
Sbjct: 1819 HGLGTVQDPQKAYEIIKPCLEQGYGRAYMLMGEVYENGLGVEKDYKQAKELYQKALDLGY 1878
Query: 269 GKAQ 272
AQ
Sbjct: 1879 SFAQ 1882
Score = 45.8 bits (107), Expect = 0.026, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 34/173 (19%)
Query: 114 GRGVRKNLDKALDSFL--KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAG 171
G+GV +N A+ +F K A +G+ AM G +Y Y + +P
Sbjct: 1676 GQGVTQN--NAMGAFYLKKAADKGNAWAMYHLGRLY------------YYGEGIPRNP-- 1719
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
L + YLQ A A + A L L RG G N++ A + Y+R E G
Sbjct: 1720 --KLALDYLQ--------MAYDANYPDACSLLGLLYERGEGTAPNIELANKLYIRGHELG 1769
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLG 278
++M+ + Y G GLP +++A K +A + G+ A+++ HGLG
Sbjct: 1770 DDQSMWYLACNYLDGNGLPKDYKRAEKLFIQAIERGNEPARIDLARMIFHGLG 1822
Score = 42.0 bits (97), Expect = 0.37, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 13/144 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + +G GV + +++ F K A + A MY + ++K + I + A
Sbjct: 792 GDLYFYGHGVDTDYEQSYYWFAKAAQSNNAYAQYSIAFMYIKGQFVEKDDTQVIKWMKLA 851
Query: 164 AVLGDPAGQFNLGISYL---------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A G Q N+G Y +EA+K + + + L L G GV
Sbjct: 852 AENGYTEAQKNMGEYYYYGSFGCRRDMKEAIKWYEMGAKSNEPTCVFTLGLIYEEGDGVQ 911
Query: 215 FNLQEAARWYLRAAEGGYVRAMYN 238
N+ +AA WY + A+ G +YN
Sbjct: 912 KNILKAADWYQKGAQAGIPSCLYN 935
Score = 38.1 bits (87), Expect = 6.5, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
GK + G+ +N +KA D F K A G++ A G MY + + A+S Y+ +
Sbjct: 287 GKVYYRGKLNERNYEKAFDWFSKAAESGNSYAQYLLGNMYENGTFVEQNYDTALSYYKNS 346
Query: 164 AV------LGDPA--GQFNLGISYLQEEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVD 214
A +G+ A G+ +EEA K+ Q A + +LA + RG
Sbjct: 347 AAQNNIMAIGEMAFMKDNGYGMPMNKEEAEKIYLQLAEERDDEWSMIKLAY-IEMDRG-- 403
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N +E +W +A E Y+ A + Y F E A K +++A + AQL
Sbjct: 404 -NSEERLKWIQKALEKEYIDAYFELGFFYQFDE--------AYKDLEKAQQSYYQAAQLG 454
Query: 275 HGLGL 279
+ G+
Sbjct: 455 NPDGM 459
>gi|260753381|ref|YP_003226274.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552744|gb|ACV75690.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 599
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ G+ + ++ +A F K A +G A ++ G +Y++ D +AA +L+++ A
Sbjct: 353 KYYEGKEISQDFKQAAYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAA-TLFQKTA 411
Query: 165 VLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
P Q LGI Y + E V L QA+ G AQ+ L G+ V N
Sbjct: 412 DQNYPKAQLFLGILYERGEGVPQDTQKALSLYKQAANLGEAEAQFILGYHYGTGKIVPLN 471
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
L++AA WY +AA G +R N + Y G G+P + A W+++AA KA++ G
Sbjct: 472 LKKAASWYNKAAHAGSLRGQINLGIAYMLGAGVPKNILVAIYWLQQAAKSDDIKAEINLG 531
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 132 AARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ----- 181
A +G A D L Y+E D K+AA +++AA GDP+ NLG Y
Sbjct: 339 AEKGDKEAQYDFALKYYEGKEISQDFKQAAY-WFQKAADQGDPSATLNLGALYYDGKLGK 397
Query: 182 ---EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+A L + + + +AQ L + RG GV + Q+A Y +AA G A +
Sbjct: 398 TDFSKAATLFQKTADQNYPKAQLFLGILYERGEGVPQDTQKALSLYKQAANLGEAEAQFI 457
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLEL 294
Y G+ +PL+ ++A W +AA G + Q+ G LG ++ A+ +L+
Sbjct: 458 LGYHYGTGKIVPLNLKKAASWYNKAAHAGSLRGQINLGIAYMLGAGVPKNILVAIYWLQQ 517
Query: 295 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
A ++ + A+ + L ++ A +++ + +D+
Sbjct: 518 AAKSDDIKAE----INLGKIYADPKNQEIFALDT 547
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEAAISLYRQAA 164
G + +G V++N + + A G A + Y E D KE A + AA
Sbjct: 243 GAIYYNGEDVKQNKELGRYWIEQAAKWGEPEAQRITSMFYQESDTLEDKEKAEFWLKTAA 302
Query: 165 VLGDPAGQFNLGISY---------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
+ GD Q + I Y + + +KLL + + G AQY AL + G+ +
Sbjct: 303 LAGDKEAQKQVSILYTNKDPKISEIHPQIIKLLREKAEKGDKEAQYDFALKYYEGKEISQ 362
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++AA W+ +AA+ G A N Y G+ +A ++ AD + KAQL
Sbjct: 363 DFKQAAYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAATLFQKTADQNYPKAQLFL 422
Query: 276 GLGLFTEGE-----MMKAVVYLELATRAGETAADHV 306
G+ L+ GE KA+ + A GE A +
Sbjct: 423 GI-LYERGEGVPQDTQKALSLYKQAANLGEAEAQFI 457
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVL 166
+ +G GV KN++K + + K G + G++YW D +E A+ +A
Sbjct: 102 YINGEGVPKNVEKGISWYKKAIQSGDIDSARRLGMLYWMGDDVPRDQEKALHWLENSANN 161
Query: 167 GD-PAGQ-----FNLG--ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD A Q + LG I + +E+ + L +++ G V +Q LA + G+ + + +
Sbjct: 162 GDWDASQMLSRFYILGENIPFDKEKGLYWLEKSAKQGGVISQEILADLYYSGQMLPLDKK 221
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+AA WY +AA+ A Y GE + + R W+++AA G +AQ +
Sbjct: 222 KAAYWYEQAAKEHNGSAAKMLGAIYYNGEDVKQNKELGRYWIEQAAKWGEPEAQRITSM- 280
Query: 279 LFTEGEMM----KAVVYLELATRAGETAA 303
+ E + + KA +L+ A AG+ A
Sbjct: 281 FYQESDTLEDKEKAEFWLKTAALAGDKEA 309
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+ Y + V G P F+L + + QE A+ G A + L + G GV ++
Sbjct: 26 TFYSKGDVEGIPK-DFHLALHWYQE--------AAKDGDKEAAQMIGLLYYNGDGVPIDI 76
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+AA W+ +AA G A + Y GEG+P + + W K+A G
Sbjct: 77 AKAAYWFEKAANAGNWDAARRLATLYINGEGVPKNVEKGISWYKKAIQSG 126
>gi|237748064|ref|ZP_04578544.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379426|gb|EEO29517.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 1181
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 102/236 (43%), Gaps = 24/236 (10%)
Query: 94 ALRPLREAM------VLLRWGKRFKHGR-GVRKNLDKALDSFLKGAARG---STLAMVDA 143
ALR L +A L + G + HG+ K+ KA + F + A G S +A D
Sbjct: 751 ALRYLEKAASANNTNALYKLGTFYFHGQYSATKDRKKAAEYFRRAAKLGHKNSQIAYADI 810
Query: 144 GLMYWEMDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQ---------EEAVKLLYQASI 193
++K E A +Y + A G P GQF G+ Y +AV L QA+
Sbjct: 811 LQKGKGVEKNEKLACEIYEKTAKEGSPYGQFRSGLCYQTGLGNRPKNPAKAVSLFEQAAR 870
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
Q LA C G+GV NL A +WY AAE G V +M T GEG
Sbjct: 871 QNLPDGQIALAYCYETGQGVAQNLALAFKWYKMAAEKGDVGSMITTGKMLDKGEGTARDS 930
Query: 254 RQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADH 305
+QA W +AA+ G +A+++ G G +M KAV + + R G A +
Sbjct: 931 KQAFYWFSKAAEKGSPEAEVQLGQLYYAGRGISADMKKAVSLFDHSARQGNALAQY 986
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGD 168
G G++KN ++A+ F K A +G+ A G M++ +D +A I L +Q A G+
Sbjct: 344 GTGMKKNPEEAVRWFEKAAKQGNIDAQSALGYMHYFGVHVPVDYAKA-IPLLKQGADKGN 402
Query: 169 PAGQFNLGISYL-------QEEAVKLLYQASIAGHVR-AQYQLALCLHRGRGVDFNLQEA 220
Q +G +Y E+ L++ + +VR AQ+ L L G G N+ E
Sbjct: 403 SQAQTAMGFAYASGTGIAKNEQKAFELFEKAARNNVRSAQFYLGEMLENGIGTQRNVPEG 462
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
W ++A+ GY +A + + G+ + +ARKWM+ AA H +AQ G+ F
Sbjct: 463 LAWIEKSAKAGYDQAQFTMGINALRGKDKMQNIDEARKWMRLAAKQNHAEAQYMLGMSYF 522
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 20/178 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQA 163
++ G+GV +NL A + A +G +M+ G M +DK E A + +A
Sbjct: 884 YETGQGVAQNLALAFKWYKMAAEKGDVGSMITTGKM---LDKGEGTARDSKQAFYWFSKA 940
Query: 164 AVLGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVD 214
A G P + LG IS ++AV L ++ G+ AQY + LCLH G+GV+
Sbjct: 941 AEKGSPEAEVQLGQLYYAGRGISADMKKAVSLFDHSARQGNALAQYWMGYLCLH-GKGVE 999
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N A W +AA A + + Y G G+P QA W +AA +AQ
Sbjct: 1000 KNEPLARDWLEKAAVQNQTGAAFELAKQYWNGNGIPSDPEQAIVWFTKAAQNNDVQAQ 1057
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G S E V + +A+ GHV A + + + G G+ N +A +W+ +AA G A
Sbjct: 162 GTSQSLRETVYWIQKAAHKGHVVAMRSMGMLSYSGLGMPENKVDAFKWFEKAASAGDAEA 221
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE---------GEMM 286
Y+ + Y G+G ++ +W+ RAA KAQ ++ L+ + GE+
Sbjct: 222 QYHLGMSYMAGKGTEKDGKKGEEWLYRAALQNQTKAQ-DYLSVLYVQRLLDKKNRPGEIE 280
Query: 287 KAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
+A +LE A R + A ++ NVI Q TS+++A
Sbjct: 281 QARQWLENAARRNDKNAIYMLNVIEQYSRKTSKNQA 316
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 20/255 (7%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGL- 145
C S ++ + +R+ L G+ F G +KN+ KA+D F K A T + GL
Sbjct: 570 CSSISEQMHDIRDPDALYSLGELFFFGNDNHKKNVPKAVDFFSKAADLNHTESQYMLGLI 629
Query: 146 MYWEMD---KKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIA 194
+Y + D K+ A + +AA P Q+ LGI L+ ++A++L+ A+
Sbjct: 630 LYSKTDVGQNKKQACQWFEKAASHNHPESQYMLGICVLEGNHTSADKKKALELIRLAADK 689
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
AQ ++ G V ++++A WY A + G+ A Y+ +L Y PL +
Sbjct: 690 NVSIAQNKMGYLYETGHIVPKDMKKAIEWYTLAEQNGFTDAAYHLALLY-LASSPPLQND 748
Query: 255 Q-ARKWMKRAADCGHGKAQLEHGLGLF-----TEGEMMKAVVYLELATRAGETAADHVKN 308
A +++++AA + A + G F + KA Y A + G +
Sbjct: 749 PLALRYLEKAASANNTNALYKLGTFYFHGQYSATKDRKKAAEYFRRAAKLGHKNSQIAYA 808
Query: 309 VILQQLSATSRDRAM 323
ILQ+ ++ +
Sbjct: 809 DILQKGKGVEKNEKL 823
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 20/233 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE--MDKK------EAAISL 159
G + G+G K+ K + + A + T A ++Y + +DKK E A
Sbjct: 226 GMSYMAGKGTEKDGKKGEEWLYRAALQNQTKAQDYLSVLYVQRLLDKKNRPGEIEQARQW 285
Query: 160 YRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
AA D + L + S Q E + L + + G+ +Q+ L L G
Sbjct: 286 LENAARRNDKNAIYMLNVIEQYSRKTSKNQAETLDTLRRRAEQGNADSQFMLGEALLAGT 345
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
G+ N +EA RW+ +AA+ G + A + FG +P+ + +A +K+ AD G+ +A
Sbjct: 346 GMKKNPEEAVRWFEKAAKQGNIDAQSALGYMHYFGVHVPVDYAKAIPLLKQGADKGNSQA 405
Query: 272 QLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
Q G G KA E A R +A +L+ T R+
Sbjct: 406 QTAMGFAYASGTGIAKNEQKAFELFEKAARNNVRSAQFYLGEMLENGIGTQRN 458
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 111 FKHGRGVRKNLD--KALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAA 164
+ H GV +D KA+ +GA +G++ A G Y ++ A L+ +AA
Sbjct: 375 YMHYFGVHVPVDYAKAIPLLKQGADKGNSQAQTAMGFAYASGTGIAKNEQKAFELFEKAA 434
Query: 165 VLGDPAGQFNLGISYLQE---------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
+ QF LG L+ E + + +++ AG+ +AQ+ + + RG+
Sbjct: 435 RNNVRSAQFYLG-EMLENGIGTQRNVPEGLAWIEKSAKAGYDQAQFTMGINALRGKDKMQ 493
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
N+ EA +W AA+ + A Y + Y GE P + ++ W +AA H +A+L
Sbjct: 494 NIDEARKWMRLAAKQNHAEAQYMLGMSYFLGELTPENQKEGIFWWDKAAAQNHVEARL 551
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAIS 158
++ GK G G ++ +A F K A +GS A V G +Y+ D K+A +S
Sbjct: 913 MITTGKMLDKGEGTARDSKQAFYWFSKAAEKGSPEAEVQLGQLYYAGRGISADMKKA-VS 971
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRG 210
L+ +A G+ Q+ +G L + V+ L +A++ A ++LA G
Sbjct: 972 LFDHSARQGNALAQYWMGYLCLHGKGVEKNEPLARDWLEKAAVQNQTGAAFELAKQYWNG 1031
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF---GEGLPLSHRQARKWMKRAA 264
G+ + ++A W+ +AA+ V+A + YS +G+ ++A W +AA
Sbjct: 1032 NGIPSDPEQAIVWFTKAAQNNDVQAQRALAFIYSVHGAKKGIKPDDQKAFYWANKAA 1088
>gi|117924831|ref|YP_865448.1| hypothetical protein Mmc1_1533 [Magnetococcus marinus MC-1]
gi|117608587|gb|ABK44042.1| TPR repeat SEL1 subfamily-like protein [Magnetococcus marinus MC-1]
Length = 976
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 90/208 (43%), Gaps = 34/208 (16%)
Query: 91 WNDALRPL-------------REAMVLLRWGKRF-KHGRGVRKNLDKALDSFLKGAARGS 136
W +AL PL R + LL+ G+ F RGVR KGA G
Sbjct: 278 WIEALEPLVSANRASVPRAAYRAGVALLKSGQGFVARSRGVR--------WLQKGAELGD 329
Query: 137 TLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--- 189
A GL Y + + E AI Y A+ G+ + QFNL + Y Q V+ +
Sbjct: 330 ANAQFRLGLAYAQGEGVVVNPERAIYWYTLASEQGEVSAQFNLALLYYQGRLVEQDFTKA 389
Query: 190 -----QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
AS G V+A+ L GRG+ N+ EA +WY AAE V A+ + Y
Sbjct: 390 RFWFEHASEQGDVQARDHLGDIYRHGRGIPVNIAEAMKWYRHAAEQKNVYALTSMGDIYQ 449
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQ 272
GEG+ +A KW ++AA GH AQ
Sbjct: 450 AGEGVAEDAAEAAKWYRKAALLGHAPAQ 477
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++HGRG+ N+ +A+ + A + + A+ G +Y
Sbjct: 409 GDIYRHGRGIPVNIAEAMKWYRHAAEQKNVYALTSMGDIY-------------------- 448
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
Q G++ EA K +A++ GH AQ LA +G+GV+ +L +AA+WY +A
Sbjct: 449 ----QAGEGVAEDAAEAAKWYRKAALLGHAPAQGNLADLYRQGKGVEKDLNQAAQWYTKA 504
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
AE G + + Y G+G+ + + A++W +++A G+ AQ
Sbjct: 505 AEQGDMVSQNWLGTLYLDGDGVEKNPQLAQQWYEKSAAQGYAFAQ 549
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E+A++ L + + G AQ+ L LH G G+ N A WY +AAE G+ A N
Sbjct: 710 EQALRWLKKGAEGGSPEAQFHLGYMLHLGVGLAPNAHRAVHWYRKAAEQGFAEAANNLGT 769
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKA------QLEHGLGLFTEGEMMKAVVYLELA 295
Y G G+ +A +W R A GH A HGLG+ + + + Y E A
Sbjct: 770 LYFQGNGVDRDVFKAVEWYTRGAKLGHVPALHNLGNHYRHGLGVAVDARLARH--YFEKA 827
Query: 296 TRAG 299
AG
Sbjct: 828 QAAG 831
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 28/250 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G + + +A FL A + S A G++Y E D EAA + YR+A
Sbjct: 556 LRDGLAGKADYKRARQLFLLAARQNSGDAQNSLGVLYEKGLGGETDPIEAA-AWYRKAIQ 614
Query: 166 LGDPAGQFNLGISYLQ-------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ + ++NLG+ Y EEA++LL A AG +AQ LA +N +
Sbjct: 615 YGNDSARYNLGMLYYANRQFGSIEEALRLLQDAQSAGVAQAQTALARIYLSKENSHYNPE 674
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-- 276
R+ AAE G A + +F L + QA +W+K+ A+ G +AQ G
Sbjct: 675 LGERFLREAAEQGGADAQALLGVLLTFKTPLKQDYEQALRWLKKGAEGGSPEAQFHLGYM 734
Query: 277 --LGLFTEGEMMKAVVYLELATRAG-ETAADHVKNVILQQLSATSRDRAMLVVDSWRA-- 331
LG+ +AV + A G AA+++ + Q DR + W
Sbjct: 735 LHLGVGLAPNAHRAVHWYRKAAEQGFAEAANNLGTLYFQ---GNGVDRDVFKAVEWYTRG 791
Query: 332 -----MPSLH 336
+P+LH
Sbjct: 792 AKLGHVPALH 801
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLAL 205
E A+ ++ A G P QF+LG ++ AV +A+ G A L
Sbjct: 710 EQALRWLKKGAEGGSPEAQFHLGYMLHLGVGLAPNAHRAVHWYRKAAEQGFAEAANNLGT 769
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+G GVD ++ +A WY R A+ G+V A++N Y G G+ + R AR + ++A
Sbjct: 770 LYFQGNGVDRDVFKAVEWYTRGAKLGHVPALHNLGNHYRHGLGVAVDARLARHYFEKAQA 829
Query: 266 CGHGKAQLEHG 276
G ++L G
Sbjct: 830 AGFMPSKLALG 840
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
EA++ L A+ A RA Y+ + L + RW + AE G A + L
Sbjct: 280 EALEPLVSANRASVPRAAYRAGVALLKSGQGFVARSRGVRWLQKGAELGDANAQFRLGLA 339
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 298
Y+ GEG+ ++ +A W A++ G AQ L G E + KA + E A+
Sbjct: 340 YAQGEGVVVNPERAIYWYTLASEQGEVSAQFNLALLYYQGRLVEQDFTKARFWFEHASEQ 399
Query: 299 GETAA-DHVKNV 309
G+ A DH+ ++
Sbjct: 400 GDVQARDHLGDI 411
>gi|423299970|ref|ZP_17277995.1| hypothetical protein HMPREF1057_01136 [Bacteroides finegoldii
CL09T03C10]
gi|408473779|gb|EKJ92301.1| hypothetical protein HMPREF1057_01136 [Bacteroides finegoldii
CL09T03C10]
Length = 601
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G +++G GV+K++ KA D + K AA+G G Y E A Y +A
Sbjct: 142 GNCYENGIGVKKDVVKAFDWYSKAAAQGYAQGECRVGYCYENGIGVEKDVVKAFDWYSKA 201
Query: 164 AVLGDPAGQFNLGISY-----LQEEAVKLL---YQASIAGHVRAQYQLALCLHRGRGVDF 215
A G G+ +G Y ++++ VK +A+ G+ + + + C G GV+
Sbjct: 202 AAQGYAQGECRVGYCYENGIGVEKDVVKAFDWYSKAAAQGYAQGECSVGYCYEEGIGVEK 261
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A WY +AA G V+A Y ++ Y + R+ARKWM +AA+ G AQ+E
Sbjct: 262 DAVKAFDWYSKAATQGNVQAEYKLAVYYE-----KWNWRKARKWMNKAAEDGSLDAQIES 316
Query: 276 GLGLFTE-----GEMMKAVV--YLELATRAG 299
+ GEM K +V Y+ LA + G
Sbjct: 317 ANKYIRDEFSKIGEMQKGMVMKYILLACKQG 347
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEA--AISLYRQA 163
G +++G GV+K++ +A D + K AA+G + G Y KK+ A Y +A
Sbjct: 106 GYCYENGIGVKKDVIRAFDWYSKAAAQGYAQGECNVGNCYENGIGVKKDVVKAFDWYSKA 165
Query: 164 AVLGDPAGQFNLGISY-----LQEEAVKLL---YQASIAGHVRAQYQLALCLHRGRGVDF 215
A G G+ +G Y ++++ VK +A+ G+ + + ++ C G GV+
Sbjct: 166 AAQGYAQGECRVGYCYENGIGVEKDVVKAFDWYSKAAAQGYAQGECRVGYCYENGIGVEK 225
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
++ +A WY +AA GY + + CY G G+ +A W +AA G Q E+
Sbjct: 226 DVVKAFDWYSKAAAQGYAQGECSVGYCYEEGIGVEKDAVKAFDWYSKAAT--QGNVQAEY 283
Query: 276 GLGLFTE 282
L ++ E
Sbjct: 284 KLAVYYE 290
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A K ++A+ G+V A+ ++ C G GV+ ++ +A +WY +AA GY + CY
Sbjct: 50 AFKYYFEAAEQGYVNAESKVGYCYENGIGVEKDVVKAFKWYSKAATQGYAQGECKVGYCY 109
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 279
G G+ +A W +AA G+ + + E+G+G+
Sbjct: 110 ENGIGVKKDVIRAFDWYSKAAAQGYAQGECNVGNCYENGIGV 151
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY-----LQEEAVKLL---YQ 190
A+ AGL + + A Y +AA G + +G Y ++++ VK +
Sbjct: 33 ALYKAGLYMEKRENNTFAFKYYFEAAEQGYVNAESKVGYCYENGIGVEKDVVKAFKWYSK 92
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G+ + + ++ C G GV ++ A WY +AA GY + N CY G G+
Sbjct: 93 AATQGYAQGECKVGYCYENGIGVKKDVIRAFDWYSKAAAQGYAQGECNVGNCYENGIGVK 152
Query: 251 LSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAG 299
+A W +AA G+ + + E+G+G+ E +++KA + A G
Sbjct: 153 KDVVKAFDWYSKAAAQGYAQGECRVGYCYENGIGV--EKDVVKAFDWYSKAAAQG 205
>gi|238911605|ref|ZP_04655442.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 331
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
GK ++ G GV KN A + + A +G A + MYW+ + L Y ++
Sbjct: 143 GKMYEGGDGVEKNHQLAFYWYKQAALQGDATAQENLADMYWDGRGTTKNLRLATLWYLRS 202
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A+ + QF LG +Y + E VK YQ A+ G A + +G GV+
Sbjct: 203 ALQDEVHSQFQLGCAYSEGEGVKQDYQQAMHWYQQAAAQGDSNAYVNIGWMYKQGHGVER 262
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +EA W+ RAAE G V A YN Y G G + +QA W ++ G
Sbjct: 263 DDEEALSWFHRAAEAGNVTAWYNLGFMYRDGRGTAVDVKQALYWFQKVQPTG 314
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 81/193 (41%), Gaps = 22/193 (11%)
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQAAVLGDPAGQFNLGISYLQE 182
K A +G LA D G W ++ + A+ YR G Q NLG Y
Sbjct: 93 KAAKQGHKLAPNDLG---WVLEGETGSEPDYAQAVFWYRVGTERGHSYAQNNLGKMYEGG 149
Query: 183 EAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
+ V+ +Q A++ G AQ LA GRG NL+ A WYLR+A V
Sbjct: 150 DGVEKNHQLAFYWYKQAALQGDATAQENLADMYWDGRGTTKNLRLATLWYLRSALQDEVH 209
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVV 290
+ + YS GEG+ ++QA W ++AA G A + G G E + +A+
Sbjct: 210 SQFQLGCAYSEGEGVKQDYQQAMHWYQQAAAQGDSNAYVNIGWMYKQGHGVERDDEEALS 269
Query: 291 YLELATRAGETAA 303
+ A AG A
Sbjct: 270 WFHRAAEAGNVTA 282
>gi|156551291|ref|XP_001601284.1| PREDICTED: protein sel-1 homolog 1-like [Nasonia vitripennis]
Length = 774
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 13/220 (5%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ GRGV + +AL F A G+ +AM G +Y E + A +++AA
Sbjct: 381 YQGGRGVPIDHQRALHYFQNAADAGNPVAMAFLGKIYLEGSDIVKQDNDTAYKYFKKAAE 440
Query: 166 LGDPAGQFNLGISYL-----QEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG+P GQ LG+ YL +++ K L+ QA+ G V Q QL G GV +
Sbjct: 441 LGNPVGQSGLGLMYLYGRGVEKDPAKALHYFSQAAEQGWVDGQLQLGNMYFSGTGVRRDY 500
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A +++ A++ G+V A YN + ++ G G+ S A + +K A+ G QL
Sbjct: 501 KLANKYFNLASQSGHVLAFYNLAQMHATGTGMMRSCPAAVELLKNVAERGKWSDQLMTAH 560
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 317
+ EG + +A V L G A IL + T
Sbjct: 561 ADYREGRINEAFVTYYLLAEMGYEVAQSNAAFILDRAETT 600
>gi|56550922|ref|YP_161761.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542496|gb|AAV88650.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 315
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EA 155
+A LL G + G+GV KN KA+ K A + A G +Y D E
Sbjct: 126 DAQTLL--GAAYHMGQGVPKNDQKAIFWLQKAADQAFPQAQNFLGEVYETGDPAVRNIEK 183
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
AIS Y++AA Q +LG++Y + E++ +A++ G + Q+ L
Sbjct: 184 AISWYQRAAEGNSVTAQAHLGMAYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFFYGLAC 243
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G GV N +EA W+ +AA+ G ++A L Y+ GEG+P S +A W+++AA G
Sbjct: 244 LKGEGVAKNPREAVSWFQKAADQGNLQATTRLGLAYASGEGVPASKEKAVFWLRKAAGQG 303
Query: 268 HGKAQ 272
AQ
Sbjct: 304 EPNAQ 308
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKK 153
+A LL G ++ G G+ KN +KA+ + K A +G+ A G Y + D+K
Sbjct: 90 DAETLL--GNAYQQGVGLPKNQEKAIFWYQKAADQGNLDAQTLLGAAYHMGQGVPKNDQK 147
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
AI ++AA P Q LG Y E+A+ +A+ V AQ L +
Sbjct: 148 --AIFWLQKAADQAFPQAQNFLGEVYETGDPAVRNIEKAISWYQRAAEGNSVTAQAHLGM 205
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
H G + N +++ W+ +AA G + + L GEG+ + R+A W ++AAD
Sbjct: 206 AYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFFYGLACLKGEGVAKNPREAVSWFQKAAD 265
Query: 266 CGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHV 306
G+ +A GL + GE + KAV +L A GE A +
Sbjct: 266 QGNLQATTRLGLA-YASGEGVPASKEKAVFWLRKAAGQGEPNAQRI 310
>gi|95930658|ref|ZP_01313392.1| Sel1 [Desulfuromonas acetoxidans DSM 684]
gi|95133310|gb|EAT14975.1| Sel1 [Desulfuromonas acetoxidans DSM 684]
Length = 563
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 93/217 (42%), Gaps = 18/217 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G ++ G+GV+KN A K A + A + GL Y W ++K YR+A
Sbjct: 233 GHLYQTGKGVKKNHQLAFSWIRKAALQNLKDAQYNLGLYYYSGWGIEKDLSEGTKWYRKA 292
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQ--------YQLALCLHRGRGVDF 215
A GD G +G +Y V Y+ +++ + +A Y L G+GV+
Sbjct: 293 AEQGDVKGMRKMGAAYYWGHGVAQDYRQALSWYRKAAAQKDLPSYYALGRLYKEGKGVNR 352
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
N A WYL+AAE G+ + + + G G+ RQA +W K+AA+ G AQ
Sbjct: 353 NTTTAYNWYLKAAEQGHGDSQFQVASALFNGRGVAKDRRQAYQWYKKAAEQGDRYAQFSV 412
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHV 306
E GLG E Y + A + E A V
Sbjct: 413 GLYYESGLGGIPESRQDALTWYRKAADQGHEKARQKV 449
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKK 153
L A + G + + V KN A F K A +G A + G +Y +
Sbjct: 151 LGHAKAQFKVGYCYYFAKHVAKNPALAAQWFQKSANQGYAPAQANMGSLYSKGIGVPRDP 210
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLAL 205
A +++AA G P GQ LG Y + VK +Q A++ AQY L L
Sbjct: 211 TMAFEWFKKAADQGHPRGQNGLGHLYQTGKGVKKNHQLAFSWIRKAALQNLKDAQYNLGL 270
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G G++ +L E +WY +AAE G V+ M Y +G G+ +RQA W ++AA
Sbjct: 271 YYYSGWGIEKDLSEGTKWYRKAAEQGDVKGMRKMGAAYYWGHGVAQDYRQALSWYRKAA 329
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+A L QA+ GH +AQ+++ C + + V N AA+W+ ++A GY A N
Sbjct: 140 KAFDLFSQAAHLGHAKAQFKVGYCYYFAKHVAKNPALAAQWFQKSANQGYAPAQANMGSL 199
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMK 287
YS G G+P A +W K+AAD GH + Q +GLG L+ G+ +K
Sbjct: 200 YSKGIGVPRDPTMAFEWFKKAADQGHPRGQ--NGLGHLYQTGKGVK 243
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 12/182 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKKEA-AISLYRQAAVL 166
F+ + ++L KA D F + A G A G Y+ + K A A ++++A
Sbjct: 128 FEGNDDITQDLAKAFDLFSQAAHLGHAKAQFKVGYCYYFAKHVAKNPALAAQWFQKSANQ 187
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q N+G Y + A + +A+ GH R Q L G+GV N Q
Sbjct: 188 GYAPAQANMGSLYSKGIGVPRDPTMAFEWFKKAADQGHPRGQNGLGHLYQTGKGVKKNHQ 247
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
A W +AA A YN L Y G G+ + KW ++AA+ G K + G
Sbjct: 248 LAFSWIRKAALQNLKDAQYNLGLYYYSGWGIEKDLSEGTKWYRKAAEQGDVKGMRKMGAA 307
Query: 279 LF 280
+
Sbjct: 308 YY 309
>gi|237748302|ref|ZP_04578782.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379664|gb|EEO29755.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 283
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI------- 193
+ GL Y++ ++ + A + A +P Q LG YL+ AVK YQ ++
Sbjct: 34 ITQGLKYYKKEEYQKAYRYFSTPAAQKNPRVQRILGYMYLKGLAVKQDYQKAMFWYGKSA 93
Query: 194 -AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
G+ +A Y + + G+GV + ++A +WY R+A GY A YN + Y GEG +
Sbjct: 94 DQGNPQAMYDIGVMYDFGQGVKQDHEKAIQWYQRSALKGYADAQYNLGIAYEKGEGTQQN 153
Query: 253 HRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKN 308
+ +AR+W ++A G+ A + +G GL E KA + A G++AA +
Sbjct: 154 YAKAREWYQKAVTQGNVSAMVNLGNLYGEGLGGEKNDSKAFDLYKKAAEKGDSAAQYNLA 213
Query: 309 VILQQLSATSRD 320
+ AT RD
Sbjct: 214 EYYRAGLATPRD 225
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G + G V+++ KA+ + K A +G+ AM D G+MY E AI Y+++
Sbjct: 69 GYMYLKGLAVKQDYQKAMFWYGKSADQGNPQAMYDIGVMYDFGQGVKQDHEKAIQWYQRS 128
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A+ G Q+NLGI+Y + E + Y +A G+V A L G G +
Sbjct: 129 ALKGYADAQYNLGIAYEKGEGTQQNYAKAREWYQKAVTQGNVSAMVNLGNLYGEGLGGEK 188
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
N +A Y +AAE G A YN + Y G P +A W +++A G KA
Sbjct: 189 NDSKAFDLYKKAAEKGDSAAQYNLAEYYRAGLATPRDLDKAIYWYEKSAAEGTIKA 244
>gi|255691613|ref|ZP_05415288.1| TPR repeat protein [Bacteroides finegoldii DSM 17565]
gi|260622681|gb|EEX45552.1| Sel1 repeat protein [Bacteroides finegoldii DSM 17565]
Length = 553
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 112/260 (43%), Gaps = 29/260 (11%)
Query: 60 DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRK 119
D L V +A+F QL A + ++DA L G ++ G V +
Sbjct: 25 DCYRLGLGVEQDYSAAFKWYQLSAE----QGYSDAQFCL---------GTLYEEGLDVEQ 71
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVLGDPAGQFNL 175
NL+ A+D + K A +G+ A G Y AA Y+ +A GD Q+ L
Sbjct: 72 NLELAVDWYRKSAEQGNAEAQYLLGDCYRVGLGVEQNYSAAFKWYQLSAEQGDLDAQYYL 131
Query: 176 GISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ Y + E AV +++ G+ AQ L C G+GVD + A +WY +
Sbjct: 132 GLLYGEGAGVEQNLELAVDWCRKSAEQGNAEAQCSLGDCYRSGQGVDQDYSAAFKWYQLS 191
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----EHGLGLFTEG 283
AE GY A Y L Y G G+ + A W +++A+ G+ AQ +GLG E
Sbjct: 192 AEQGYSDAQYCLGLLYGEGAGVERNSELAVDWYRKSAEQGNADAQCLLGACYGLGDGVEQ 251
Query: 284 EMMKAVVYLELATRAGETAA 303
+ A + +L+ G + A
Sbjct: 252 DDFMAFRWYQLSAEQGNSVA 271
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV ++ +++ + A +G+++A G +Y E E A+ YR++
Sbjct: 348 GDYYRLGQGVEQDYSESIKWYQLSAEQGNSIAQYCLGFLYREGVGVEQNLELAVDWYRKS 407
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A G+ Q LG Y + V+ Y S G+ AQ L + G GV+
Sbjct: 408 ADQGNADAQCCLGDCYRLGQGVEQNYSESFKWYQLSARQGNSVAQLYLGVLYDEGVGVEQ 467
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
NL+ A WY R+A+ G A CY G+G+ + A KW + +A+ + AQL
Sbjct: 468 NLELAVDWYRRSADQGNAGAQCCLGDCYRLGQGVEQDYSVAFKWYRLSAEQDYSDAQLRL 527
Query: 276 GLGLFTEG 283
G+ L+ EG
Sbjct: 528 GV-LYAEG 534
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-MDKK---EAAISLYRQA 163
G ++ G GV ++ A + A +G + A G +Y E +D + E A+ YR++
Sbjct: 24 GDCYRLGLGVEQDYSAAFKWYQLSAEQGYSDAQFCLGTLYEEGLDVEQNLELAVDWYRKS 83
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A G+ Q+ LG Y V+ Y A+ G + AQY L L G GV+
Sbjct: 84 AEQGNAEAQYLLGDCYRVGLGVEQNYSAAFKWYQLSAEQGDLDAQYYLGLLYGEGAGVEQ 143
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
NL+ A W ++AE G A + CY G+G+ + A KW + +A+ G+ AQ
Sbjct: 144 NLELAVDWCRKSAEQGNAEAQCSLGDCYRSGQGVDQDYSAAFKWYQLSAEQGYSDAQYCL 203
Query: 276 GLGLFTEG 283
GL L+ EG
Sbjct: 204 GL-LYGEG 210
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 18/242 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA LL G ++ G GV +N A + A +G A GL+Y E E
Sbjct: 90 EAQYLL--GDCYRVGLGVEQNYSAAFKWYQLSAEQGDLDAQYYLGLLYGEGAGVEQNLEL 147
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCL 207
A+ R++A G+ Q +LG Y + V Y A+ G+ AQY L L
Sbjct: 148 AVDWCRKSAEQGNAEAQCSLGDCYRSGQGVDQDYSAAFKWYQLSAEQGYSDAQYCLGLLY 207
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV+ N + A WY ++AE G A CY G+G+ A +W + +A+ G
Sbjct: 208 GEGAGVERNSELAVDWYRKSAEQGNADAQCLLGACYGLGDGVEQDDFMAFRWYQLSAEQG 267
Query: 268 HGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
+ AQ G LG + + A + +L+ G+ A + ++ + + ++ +
Sbjct: 268 NSVAQCCLGDYYRLGDGVDQDYSAAFKWYQLSAEQGDLDAQYYLGLLYGEGAGVEQNLEL 327
Query: 324 LV 325
V
Sbjct: 328 AV 329
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G GV ++ A + A +G A GL+Y E E A+ R++
Sbjct: 276 GDYYRLGDGVDQDYSAAFKWYQLSAEQGDLDAQYYLGLLYGEGAGVEQNLELAVDWCRKS 335
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A G+ Q LG Y + V+ Y SI G+ AQY L G GV+
Sbjct: 336 AEQGNADAQCALGDYYRLGQGVEQDYSESIKWYQLSAEQGNSIAQYCLGFLYREGVGVEQ 395
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
NL+ A WY ++A+ G A CY G+G+ ++ ++ KW + +A G+ AQL
Sbjct: 396 NLELAVDWYRKSADQGNADAQCCLGDCYRLGQGVEQNYSESFKWYQLSARQGNSVAQLYL 455
Query: 276 GLGLFTEG 283
G+ L+ EG
Sbjct: 456 GV-LYDEG 462
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 17/239 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV ++ A + A +G + A GL+Y E E A+ YR++
Sbjct: 168 GDCYRSGQGVDQDYSAAFKWYQLSAEQGYSDAQYCLGLLYGEGAGVERNSELAVDWYRKS 227
Query: 164 AVLGDPAGQFNLGISYLQEEAVKL-------LYQASIA-GHVRAQYQLALCLHRGRGVDF 215
A G+ Q LG Y + V+ YQ S G+ AQ L G GVD
Sbjct: 228 AEQGNADAQCLLGACYGLGDGVEQDDFMAFRWYQLSAEQGNSVAQCCLGDYYRLGDGVDQ 287
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ A +WY +AE G + A Y L Y G G+ + A W +++A+ G+ AQ
Sbjct: 288 DYSAAFKWYQLSAEQGDLDAQYYLGLLYGEGAGVEQNLELAVDWCRKSAEQGNADAQCAL 347
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
G LG E + +++ + +L+ G + A + + ++ ++ L VD +R
Sbjct: 348 GDYYRLGQGVEQDYSESIKWYQLSAEQGNSIAQYCLGFLYREGVGVEQNLE-LAVDWYR 405
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++ G GV +NL+ A+D + K A +G+ A G Y E + E+ Y+
Sbjct: 384 GFLYREGVGVEQNLELAVDWYRKSADQGNADAQCCLGDCYRLGQGVEQNYSES-FKWYQL 442
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G+ Q LG+ Y + E AV +++ G+ AQ L C G+GV+
Sbjct: 443 SARQGNSVAQLYLGVLYDEGVGVEQNLELAVDWYRRSADQGNAGAQCCLGDCYRLGQGVE 502
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ A +WY +AE Y A + Y+ G G+ + A W +++A+
Sbjct: 503 QDYSVAFKWYRLSAEQDYSDAQLRLGVLYAEGLGVEQNLELAADWYRKSAE 553
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQ L C G GV+ + A +WY +AE GY A + Y G + +
Sbjct: 15 GDAEAQCSLGDCYRLGLGVEQDYSAAFKWYQLSAEQGYSDAQFCLGTLYEEGLDVEQNLE 74
Query: 255 QARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
A W +++A+ G+ +AQ G +GL E A + +L+ G+ A + ++
Sbjct: 75 LAVDWYRKSAEQGNAEAQYLLGDCYRVGLGVEQNYSAAFKWYQLSAEQGDLDAQYYLGLL 134
Query: 311 LQQLSATSRDRAMLV 325
+ + ++ + V
Sbjct: 135 YGEGAGVEQNLELAV 149
>gi|429764401|ref|ZP_19296721.1| Sel1 repeat protein [Clostridium celatum DSM 1785]
gi|429188191|gb|EKY29080.1| Sel1 repeat protein [Clostridium celatum DSM 1785]
Length = 881
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L+ G+ + GRGV K+ KA + FL A + A GL Y E I++ R
Sbjct: 198 LVEAGENYYLGRGVSKSSKKAYECFLNAAKFKNEYAESYLGLFY------EKGIAVNRNY 251
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
+ A + Y+A+I G+ AQY L + G GV + +A W
Sbjct: 252 EI------------------AFQWYYKAAIKGNAFAQYALGMLYFEGNGVIKDYYKAFLW 293
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
+ ++AE YV A Y CY G G S +A KW ++AA+ AQ L ++ G
Sbjct: 294 FQKSAENDYVEAFYQLGRCYYSGFGCEESKDKAFKWYQKAAEENFSAAQYALSL-MYKNG 352
Query: 284 E-----MMKAVVYLELATRAGETAADHV 306
E M+ A ++E + G A ++
Sbjct: 353 EGCDTNMISAYYWIEKSAENGYEDAYYI 380
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEAAISLYRQAA 164
G ++ G V +N + A + K A +G+ A G++Y+E + K L+ Q +
Sbjct: 238 GLFYEKGIAVNRNYEIAFQWYYKAAIKGNAFAQYALGMLYFEGNGVIKDYYKAFLWFQKS 297
Query: 165 VLGDPAGQF-NLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
D F LG Y +++A K +A+ AQY L+L G G D
Sbjct: 298 AENDYVEAFYQLGRCYYSGFGCEESKDKAFKWYQKAAEENFSAAQYALSLMYKNGEGCDT 357
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
N+ A W ++AE GY A Y Y G + + +++A ++ + +
Sbjct: 358 NMISAYYWIEKSAENGYEDAYYIIGKSYLEGIYVDVDYKKAFYYLNKGYE 407
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 15/177 (8%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLY 160
R G + +G G+ +NLDKA++ + AM + Y +K E + L
Sbjct: 484 RLGIMYYNGEGLERNLDKAIEYMQIAVQKKEPHAMYVLAVAYLRTNKFGEKTTEISKELL 543
Query: 161 RQAAVLGDPAGQFNLG---ISYLQE-------EAVKLLYQASIAGHVRAQYQLALCLHRG 210
++A L P +L I+ L+E E +K + G + +Q +G
Sbjct: 544 KRAFELKSPYAAESLASLMINELKEGKEINNDELIKYIRFGVENGLENSIFQYGYIYEKG 603
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GV +L+ A +Y AAE + A+ + Y G + A +W ++AAD G
Sbjct: 604 IGVPQDLETAYYYYNIAAEKNSINAIVKIADWYKKGIYFKCNIDLAIRWYEKAADMG 660
>gi|374999509|ref|YP_004975597.1| hypothetical protein AZOLI_p60012 [Azospirillum lipoferum 4B]
gi|357428480|emb|CBS91437.1| conserved protein of unknown function [Azospirillum lipoferum 4B]
Length = 450
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 27/249 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
+ +G+GV +++++AL + + A +G A + ++Y EA A + YRQAA
Sbjct: 201 YANGQGVERDIEQALAWYERAAEQGFVNAQLALAIVYEHGTGVEADPARAAAFYRQAAEQ 260
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
G P Q NLG+ Y + + V Y+ ++ G+V AQ+ L L G +
Sbjct: 261 GHPVAQVNLGLLYARGQGVPKDYRETLKWCRLSAEQGNVNAQFNLGLIHSNGLTGSPDYA 320
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
EAA WY +AA G V A N L + G G + W+++AA GH A G
Sbjct: 321 EAAVWYRKAAMQGNVGAQVNLGLLLAHGWGGRPELVEGVDWLRKAAAQGHSGAMSNLGAL 380
Query: 279 LFTEGEM----MKAVVYLELAT--------RAGETAADHVKNVILQQLSATSRDRAMLVV 326
T ++A V+ +A R G A H + L++ R +A +++
Sbjct: 381 YATRDSKAYNPIQAYVWYIMAAASTQPGPEREGLEAKAHE---LGAGLTSEDRHKAQVIM 437
Query: 327 DSWRAMPSL 335
+ W+ P L
Sbjct: 438 EEWKKNPKL 446
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM--YWEMDKKEAAISL--YRQAAVL 166
+ +G G+ ++ +AL + A G A GL+ + + ++ A++ YR++A
Sbjct: 129 YPNGLGIGPDIAQALHWYRLAAEAGHAEAQHHIGLLHAFGQGVPQDHAVAAEWYRKSAEQ 188
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q L Y E+A+ +A+ G V AQ LA+ G GV+ +
Sbjct: 189 GYAVAQHALASLYANGQGVERDIEQALAWYERAAEQGFVNAQLALAIVYEHGTGVEADPA 248
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 277
AA +Y +AAE G+ A N L Y+ G+G+P +R+ KW + +A+ G+ AQ GL
Sbjct: 249 RAAAFYRQAAEQGHPVAQVNLGLLYARGQGVPKDYRETLKWCRLSAEQGNVNAQFNLGLI 308
Query: 278 ---GLFTEGEMMKAVVYLELATRAGETAA 303
GL + +A V+ A G A
Sbjct: 309 HSNGLTGSPDYAEAAVWYRKAAMQGNVGA 337
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 52/229 (22%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAG 195
GL +E + AA++ + A G Q+ +G Y + + V +A+ G
Sbjct: 22 GLAAFEAEDYAAAVADWLPLAERGHAEAQYRMGQLYARGQGVVRDFGDAAHWFRKAAEQG 81
Query: 196 HVRAQYQLALCLHRGRG------------------------------------VDFNLQE 219
H A++ LALC G G + ++ +
Sbjct: 82 HTEARFSLALCYANGEGAAQESALPVRWYKTVSKTNPAAAEANLALLYPNGLGIGPDIAQ 141
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL-- 277
A WY AAE G+ A ++ L ++FG+G+P H A +W +++A+ G+ AQ H L
Sbjct: 142 ALHWYRLAAEAGHAEAQHHIGLLHAFGQGVPQDHAVAAEWYRKSAEQGYAVAQ--HALAS 199
Query: 278 ----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
G E ++ +A+ + E A G A ++ + + D A
Sbjct: 200 LYANGQGVERDIEQALAWYERAAEQGFVNAQLALAIVYEHGTGVEADPA 248
>gi|242019138|ref|XP_002430022.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515084|gb|EEB17284.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 499
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK--EAAISLYRQAAVLG 167
++ GRGV ++ +AL FL+ A G+ +AM G ++ K+ E A +++AA LG
Sbjct: 254 HYQGGRGVLQDHHRALHYFLQAADAGNPIAMAFLGKARSDIVKQDNETAYKYFKKAADLG 313
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+P GQ LG+ YL +A+K QA+ G V Q QL G GV + +
Sbjct: 314 NPVGQSGLGLMYLYGKGIKKDYNKALKYFSQAAEQGWVDGQLQLGNMYFSGLGVRRDYKL 373
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A +++ A++ G+V A YN + ++ G GL S A + K A+ G +L L
Sbjct: 374 ANKYFTLASQSGHVLAFYNLAQMHATGTGLIRSCPTAVELYKNVAERGKWGEKLMEAHSL 433
Query: 280 FTEGEMMKAVVYLELATRAGETAA 303
+ + + +A + L + G A
Sbjct: 434 YRDEDYDEAFMIYALLSELGYEVA 457
>gi|157119150|ref|XP_001659361.1| hypothetical protein AaeL_AAEL008521 [Aedes aegypti]
gi|108875461|gb|EAT39686.1| AAEL008521-PA [Aedes aegypti]
Length = 790
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ GRG+ + KAL F + A G+ +AM G +Y E + A +++AA
Sbjct: 360 YQGGRGISLDHQKALQYFSQAANAGNAVAMAYLGKIYLEGSDNIKADNDTAFKYFKKAAD 419
Query: 166 LGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG+P GQ LG+ YL + V K QA+ G V Q QL G GV +
Sbjct: 420 LGNPVGQSGLGVMYLHGKGVPKDTVKALKFFTQAADQGWVDGQLQLGNMYFSGIGVKRDF 479
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ A +++ A++ G+V A YN ++ G G+ S A + K A+ G
Sbjct: 480 KMANKYFNLASQSGHVLAFYNLGQMHAVGLGMMRSCPTAVELFKNVAERG 529
>gi|323457143|gb|EGB13009.1| hypothetical protein AURANDRAFT_18516 [Aureococcus anophagefferens]
Length = 334
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGIS 178
K ++A + A +G T A + G+ Y E + E A ++++A LGD +LG +
Sbjct: 166 KRFEEAFRYYALSADQGYTDAEHNLGVCYMEGEGTEKAAKIWKRAVELGDAEAMESLGEA 225
Query: 179 YLQEEAVKL-------LYQASIA-GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y E VKL LY+A+ GH AQ+ LA+ L + +EA R+Y AA+
Sbjct: 226 YEYGEGVKLDKKKAERLYRAAADRGHALAQHNLAVLLD----AEEKFEEAFRYYALAADQ 281
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
GY N CY GEG + +AR W +RAA GH
Sbjct: 282 GYTDGETNLGCCYRDGEGTEVDLGKARYWFERAAAKGH 319
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGS-----TLAMVDAGL--MYWEMDKKEAAISLYRQA 163
+ +G G +L KA F + AA+G +LA++DA + ++DKK+A + LYR A
Sbjct: 88 YGNGEGTEVDLGKARYWFERAAAKGHEKAIRSLALLDASIDGEGVKLDKKKA-MKLYRAA 146
Query: 164 AVLGDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
A GD Q NL E EA + ++ G+ A++ L +C G G ++
Sbjct: 147 ADRGDAVAQANLAFLLDSEKRFEEAFRYYALSADQGYTDAEHNLGVCYMEGEGT----EK 202
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
AA+ + RA E G AM + Y +GEG+ L ++A + + AAD GH AQ + L
Sbjct: 203 AAKIWKRAVELGDAEAMESLGEAYEYGEGVKLDKKKAERLYRAAADRGHALAQHNLAVLL 262
Query: 280 FTEGEMMKAVVYLELATRAGET 301
E + +A Y LA G T
Sbjct: 263 DAEEKFEEAFRYYALAADQGYT 284
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 135 GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE---EAVK 186
G+ AM G +YWE +DKK+A L R AA GD Q NLG +E EA +
Sbjct: 9 GNVEAMRHLGKIYWEGSGVKLDKKKAE-RLVRMAAGRGDAVAQNNLGHLLSEERPEEAFR 67
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF- 245
A+ G A+ L C G G + +L +A W+ RAA G+ +A+ + +L +
Sbjct: 68 YYALAADQGFTCAENSLGCCYGNGEGTEVDLGKARYWFERAAAKGHEKAIRSLALLDASI 127
Query: 246 -GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 304
GEG+ L ++A K + AAD G AQ L +E +A Y L+ G T A+
Sbjct: 128 DGEGVKLDKKKAMKLYRAAADRGDAVAQANLAFLLDSEKRFEEAFRYYALSADQGYTDAE 187
Query: 305 HVKNVILQQLSATSR-----DRAMLVVDSWRAMPSL 335
H V + T + RA+ + D+ AM SL
Sbjct: 188 HNLGVCYMEGEGTEKAAKIWKRAVELGDA-EAMESL 222
>gi|414169803|ref|ZP_11425536.1| hypothetical protein HMPREF9696_03391 [Afipia clevelandensis ATCC
49720]
gi|410885535|gb|EKS33350.1| hypothetical protein HMPREF9696_03391 [Afipia clevelandensis ATCC
49720]
Length = 1097
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRG 212
R AA GDP F +GI Y + V Y +AS G V A ++L +G G
Sbjct: 868 RAAANKGDPGAAFEIGIRYAEGRGVAQDYATAAKWYERASHNGIVPATFRLGTLYEKGLG 927
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ ++ A R+YL AAE G +AM+N ++ + G G +++ A +W ++AA+ G +Q
Sbjct: 928 LKKDIDTARRYYLDAAEKGSAKAMHNLAVLDADGGGAGPNYKSASQWFRKAAERGIADSQ 987
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
G+ G+ E + ++ + LA G+ + ++ I ++L A S A L +
Sbjct: 988 FNLGILYARGIGVEQNLAESYKWFSLAAAQGDADSGRKRDDIAKRLDAQSLAAAKLATQT 1047
Query: 329 WRA 331
+ A
Sbjct: 1048 FVA 1050
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 33/131 (25%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLY 160
R G ++ G G++K++D A +L A +GS AM + ++ + ++A +
Sbjct: 916 FRLGTLYEKGLGLKKDIDTARRYYLDAAEKGSAKAMHNLAVLDADGGGAGPNYKSASQWF 975
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
R+AA G QFNLGI Y RG GV+ NL E+
Sbjct: 976 RKAAERGIADSQFNLGILYA----------------------------RGIGVEQNLAES 1007
Query: 221 ARWY-LRAAEG 230
+W+ L AA+G
Sbjct: 1008 YKWFSLAAAQG 1018
>gi|421653723|ref|ZP_16094055.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
gi|408512425|gb|EKK14068.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
Length = 230
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDP 169
+GV KN ++A GS A G+MY+ E D K A + +AA
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRA-FEYFAKAADKSHA 112
Query: 170 AGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NL + Y + E+A + +A+ G+ A+Y LA +G GV + ++A
Sbjct: 113 KAQYNLAVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQAL 172
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+WY +AAE A YN + Y GEG P + + A+KW ++AAD G+
Sbjct: 173 KWYTKAAEHNERDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAGN 219
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGG 231
F+L S E +V + + G AQY L + L G +GV N ++A +W A + G
Sbjct: 15 FSLHSSAFAEPSVADIQYRAEQGQSVAQYHLGMMLLSGEQGVVKNYEQAFKWLTAADQNG 74
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
V A Y+ + Y G G+ ++A ++ +AAD H KAQ + L+ GE
Sbjct: 75 SVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAADKSHAKAQYNLAV-LYDRGE 126
>gi|75674735|ref|YP_317156.1| Sel1 repeat-containing protein [Nitrobacter winogradskyi Nb-255]
gi|74419605|gb|ABA03804.1| sel1-like repeat protein [Nitrobacter winogradskyi Nb-255]
Length = 680
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM------DKKEAAISLYRQAAVLG 167
G GV K++DKA ++ L+ AAR + A ++ D +EAA+ Y +AA
Sbjct: 281 GHGVAKDIDKA-ETALRKAARKDYFPAIQALAEFYSHGGGFAPDLREAAV-WYEKAAERD 338
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
D QF +G Y +A K +A+ GH A + +A+ G GV+ ++
Sbjct: 339 DVQAQFFMGRFYAMGTGVGPNIRQAAKWFERAARNGHATAAFNIAIFYLNGSGVERDVDR 398
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A W+ RA+EGG A YS G G+P + AR+W+ +AA+ G AQ + L L
Sbjct: 399 AIEWFERASEGGIRAAQLQLGKLYSAGNGVPRDQKLAREWLGKAANGGDPDAQTAYALFL 458
Query: 280 FTE 282
+
Sbjct: 459 LRQ 461
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
F HG V +N+D A A +G A G MY E + A++ Y AA
Sbjct: 134 FPHGTSVERNVDAAFHWISAAADKGKAEAQTVLGNMYSEGLGCEKNLQIALAWYGVAAEQ 193
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
A +F LG + Q + V + ++ A+ HVRAQ LA +G G+ N
Sbjct: 194 NCAAAEFALGDIHFQGKGVPVDFEQAAVWYRKAAEQDHVRAQVALAFMNLKGTGMPENPA 253
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
EAAR + AA + A+YN L G G+ +A +++AA
Sbjct: 254 EAARLFQGAAMHDDIIALYNIGLLRLKGHGVAKDIDKAETALRKAA 299
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI---SLYRQ 162
R G+ + G GV +++ A + + A G A GL++ + +K +RQ
Sbjct: 57 RIGRLYVKGEGVVRSVPDAAIWYERAARLGHVDAQFQLGLIFLQGEKPLLGPHRHETWRQ 116
Query: 163 AAV--LGDPAGQ-----FNLGISYLQ--EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
++ LGD A F G S + + A + A+ G AQ L G G
Sbjct: 117 SSAIRLGDKASNIHQLVFPHGTSVERNVDAAFHWISAAADKGKAEAQTVLGNMYSEGLGC 176
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ NLQ A WY AAE A + + G+G+P+ QA W ++AA+ H +AQ+
Sbjct: 177 EKNLQIALAWYGVAAEQNCAAAEFALGDIHFQGKGVPVDFEQAAVWYRKAAEQDHVRAQV 236
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 104/264 (39%), Gaps = 54/264 (20%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----AAVL 166
+ +G GV +++D+A++ F + + G A + G +Y + L R+ AA
Sbjct: 386 YLNGSGVERDVDRAIEWFERASEGGIRAAQLQLGKLYSAGNGVPRDQKLAREWLGKAANG 445
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNL 217
GDP Q + L+ E+A LL +A+ A H A +QL + LH G+ G + ++
Sbjct: 446 GDPDAQTAYALFLLRQDGSAEQLEQAKALLVEAAEADHAPAAFQLGV-LHMGKFGGETDI 504
Query: 218 QEAARWYLRAAEGGYVRAMYNTSL------------------------------------ 241
A W+ RAA G+V A Y +L
Sbjct: 505 AAAVPWFARAAGAGHVDAQYTLALLHLDPGSGMSDAKAAASWMTKAAHAGHAGAQFQLAV 564
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATR 297
Y G GL Q +W + AA GH AQ G G E ++ KAV + E A R
Sbjct: 565 LYCTGAGLAQDVAQGVRWYEAAAQQGHRIAQFNLAVMLGKGQGCEVDLGKAVEWFEKAAR 624
Query: 298 AGETAADHVKNVILQQLSATSRDR 321
A L S ++D+
Sbjct: 625 QDVAEAQIALGDALMSGSGVTKDQ 648
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALC 206
AA+ + +AA G Q+ L + +L + A + +A+ AGH AQ+QLA+
Sbjct: 506 AAVPWFARAAGAGHVDAQYTLALLHLDPGSGMSDAKAAASWMTKAAHAGHAGAQFQLAVL 565
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G G+ ++ + RWY AA+ G+ A +N ++ G+G + +A +W ++AA
Sbjct: 566 YCTGAGLAQDVAQGVRWYEAAAQQGHRIAQFNLAVMLGKGQGCEVDLGKAVEWFEKAARQ 625
Query: 267 GHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVI 310
+AQ+ G L + + K AV + A A H N I
Sbjct: 626 DVAEAQIALGDALMSGSGVTKDQDAAVQWYRRAAGHNHEGARHRLNAI 673
>gi|422021694|ref|ZP_16368204.1| Sel1 domain-containing protein repeat-containing protein
[Providencia sneebia DSM 19967]
gi|414098291|gb|EKT59940.1| Sel1 domain-containing protein repeat-containing protein
[Providencia sneebia DSM 19967]
Length = 306
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY---RQAA 164
GK + G G++K+ + + K A +G A + G +Y +K+ ++ ++AA
Sbjct: 80 GKMYFDGNGMKKDYNLSFLWMTKAAEQGDVEAQSNLGFLYSTDGEKQDYEQVFLWTQKAA 139
Query: 165 VLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
+ G Q NLG Y VK + +A+ G AQY L+L G GV +
Sbjct: 140 LQGFAIAQGNLGSLYRDGNGVKKDVHQAFLWIQKAANQGLASAQYDLSLLYSDGLGVKQD 199
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
++A RW +AA+ G+ A YN + Y G G+ ++QA W ++AA+ G KAQ G
Sbjct: 200 DEQAFRWTKKAADQGFTHAQYNLGVMYMDGIGVKQDYKQAFLWTQQAAEKGFAKAQYNLG 259
Query: 277 L 277
+
Sbjct: 260 I 260
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV+K++ +A K A +G A D L+Y +
Sbjct: 151 GSLYRDGNGVKKDVHQAFLWIQKAANQGLASAQYDLSLLYSD------------------ 192
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
LG+ E+A + +A+ G AQY L + G GV + ++A W +A
Sbjct: 193 ------GLGVKQDDEQAFRWTKKAADQGFTHAQYNLGVMYMDGIGVKQDYKQAFLWTQQA 246
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
AE G+ +A YN + Y G G+ A+ W + A +
Sbjct: 247 AEKGFAKAQYNLGILYYSGSGVTQDKSLAKSWFRNACN 284
>gi|323453470|gb|EGB09341.1| hypothetical protein AURANDRAFT_23899, partial [Aureococcus
anophagefferens]
Length = 274
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 42/218 (19%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLA 204
++DKK+AA L+R AA GD + Q N+ + Y EA++ +A+ G AQY LA
Sbjct: 33 KLDKKKAA-QLWRMAADRGDASAQQNVALVYFNAGRFAEAIRFYKRAAEQGLSDAQYSLA 91
Query: 205 LCLHRGRGVDFNLQEAARWY------------------------------------LRAA 228
+C +G+G + +L EA RWY RAA
Sbjct: 92 VCFEQGKGTEVDLAEAKRWYRKGVDRGEAQSRNNLAGLLGAEGRHRESFELAAELYERAA 151
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 288
E G V AM N + G+G+ + + + AAD G AQL+ G L +G+ +A
Sbjct: 152 ELGEVHAMVNLGMLLRTGDGVNQDREKMFQLYRSAADRGFAWAQLKLGSELHQDGKDEEA 211
Query: 289 VVYLELATRAGETAADHVKNVILQQL-SATSRDRAMLV 325
+L+L+ G A+ L L +DRA +
Sbjct: 212 FPFLKLSAEQGNATAELFVGYYLSGLWPGVPQDRAEAI 249
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+++A+ + RA E G V AM N + Y GEG+ L ++A + + AAD G AQ L
Sbjct: 1 KKSAKLFKRAVELGNVDAMSNLAHLYDNGEGVKLDKKKAAQLWRMAADRGDASAQQNVAL 60
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
F G +A+ + + A G + A + V +Q T D A
Sbjct: 61 VYFNAGRFAEAIRFYKRAAEQGLSDAQYSLAVCFEQGKGTEVDLA 105
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN------------------------- 216
+++ KL +A G+V A LA G GV +
Sbjct: 1 KKSAKLFKRAVELGNVDAMSNLAHLYDNGEGVKLDKKKAAQLWRMAADRGDASAQQNVAL 60
Query: 217 -------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
EA R+Y RAAE G A Y+ ++C+ G+G + +A++W ++ D G
Sbjct: 61 VYFNAGRFAEAIRFYKRAAEQGLSDAQYSLAVCFEQGKGTEVDLAEAKRWYRKGVD--RG 118
Query: 270 KAQLEHGLG--LFTEGEMMKAV-VYLELATRAGETAADHVK---NVILQQLSATSRDR 321
+AQ + L L EG ++ + EL RA E H ++L+ ++DR
Sbjct: 119 EAQSRNNLAGLLGAEGRHRESFELAAELYERAAELGEVHAMVNLGMLLRTGDGVNQDR 176
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEMDKKEA---AISLYRQAAVL 166
F+ G+G +L +A + KG RG + + AGL+ E +E+ A LY +AA L
Sbjct: 94 FEQGKGTEVDLAEAKRWYRKGVDRGEAQSRNNLAGLLGAEGRHRESFELAAELYERAAEL 153
Query: 167 GDPAGQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ NLG ++ +E+ +L A+ G AQ +L LH+ D +
Sbjct: 154 GEVHAMVNLGMLLRTGDGVNQDREKMFQLYRSAADRGFAWAQLKLGSELHQ----DGKDE 209
Query: 219 EAARWYLRAAEGGYVRA-MYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
EA + +AE G A ++ G+P +A +W +RAA G
Sbjct: 210 EAFPFLKLSAEQGNATAELFVGYYLSGLWPGVPQDRAEAIRWFERAAAKG 259
>gi|183600300|ref|ZP_02961793.1| hypothetical protein PROSTU_03860 [Providencia stuartii ATCC 25827]
gi|386743727|ref|YP_006216906.1| hypothetical protein S70_11840 [Providencia stuartii MRSN 2154]
gi|188020091|gb|EDU58131.1| Sel1 repeat protein [Providencia stuartii ATCC 25827]
gi|384480420|gb|AFH94215.1| hypothetical protein S70_11840 [Providencia stuartii MRSN 2154]
Length = 263
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 30/227 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+R+ G GV ++ A + F+K +G+ A G MY V G
Sbjct: 53 GQRYFKGNGVSQDSKVAAEWFIKAGDQGNADAQFQLGTMY-----------------VNG 95
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ ++A+ QA+ RA+ +A+ +G GV +L++AA W+ +A
Sbjct: 96 -------FGVRRDYDKAMLWYQQAAKQNDTRAETNMAMMYAQGLGVAQDLEKAAYWFRKA 148
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
A+GG V A ++ YS G G+ L + +A W ++AA KAQ G+ +++EG+ +K
Sbjct: 149 AQGGNVIAQFHIGQMYSIGSGVDLDNEKAVFWFRKAAKQRDAKAQDRLGV-MYSEGKGVK 207
Query: 288 -----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
+ +L A +G + +++ + +QLS + +A + +++
Sbjct: 208 KNLQQSYAWLTTAVYSGNKESHRLQSKVAEQLSESELKQAQKLAENY 254
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
++ ++ + Q + G AQY L +G GV + + AA W+++A + G A +
Sbjct: 31 QQTIEQITQLAQKGDPTAQYLLGQRYFKGNGVSQDSKVAAEWFIKAGDQGNADAQFQLGT 90
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATR 297
Y G G+ + +A W ++AA +A+ + + GL ++ KA + A +
Sbjct: 91 MYVNGFGVRRDYDKAMLWYQQAAKQNDTRAETNMAMMYAQGLGVAQDLEKAAYWFRKAAQ 150
Query: 298 AGETAA 303
G A
Sbjct: 151 GGNVIA 156
>gi|157106426|ref|XP_001649316.1| hypothetical protein AaeL_AAEL004514 [Aedes aegypti]
gi|108879836|gb|EAT44061.1| AAEL004514-PA [Aedes aegypti]
Length = 790
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ GRG+ + KAL F + A G+ +AM G +Y E + A +++AA
Sbjct: 360 YQGGRGISLDHQKALQYFSQAANAGNAVAMAYLGKIYLEGSDNIKADNDTAFKYFKKAAD 419
Query: 166 LGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG+P GQ LG+ YL + V K QA+ G V Q QL G GV +
Sbjct: 420 LGNPVGQSGLGVMYLHGKGVPKDTVKALKFFTQAADQGWVDGQLQLGNMYFSGIGVKRDF 479
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ A +++ A++ G+V A YN ++ G G+ S A + K A+ G
Sbjct: 480 KMANKYFNLASQSGHVLAFYNLGQMHAVGLGMMRSCPTAVELFKNVAERG 529
>gi|212710155|ref|ZP_03318283.1| hypothetical protein PROVALCAL_01209 [Providencia alcalifaciens DSM
30120]
gi|422019093|ref|ZP_16365643.1| hypothetical protein OO9_10346 [Providencia alcalifaciens Dmel2]
gi|212687154|gb|EEB46682.1| hypothetical protein PROVALCAL_01209 [Providencia alcalifaciens DSM
30120]
gi|414103635|gb|EKT65209.1| hypothetical protein OO9_10346 [Providencia alcalifaciens Dmel2]
Length = 265
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 30/227 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+R+ G+GV ++ A + F+K +G++ A G MY V G
Sbjct: 54 GERYFKGQGVSQDSKVAAEWFIKAGDQGNSDAQFRLGTMY-----------------VNG 96
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ ++A+ +A+ G RA+ +A +G GV +L++AA W+ +A
Sbjct: 97 -------FGVRRDYDKAMLWYEEAAKNGDTRAETNMATMYAQGLGVKQDLEKAAYWFRKA 149
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
A+ G V A + YS G G+ L + +A W ++AA +Q G+ +++EG+ +K
Sbjct: 150 AQSGNVIAQFKIGQMYSIGSGVALDNEKAVFWFRKAAKQRDANSQDRLGV-MYSEGKGVK 208
Query: 288 -----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
A +L A +G + ++ I +QLSA +A + D++
Sbjct: 209 KNLQQAYAWLSTAVYSGNKESQRLQKKIAEQLSAEELKQAQKLADNY 255
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G + +G GVR++ DKA+ + + A G T A + MY +
Sbjct: 87 FRLGTMYVNGFGVRRDYDKAMLWYEEAAKNGDTRAETNMATMYAQ--------------- 131
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
LG+ E+A +A+ +G+V AQ+++ G GV + ++A W+
Sbjct: 132 ---------GLGVKQDLEKAAYWFRKAAQSGNVIAQFKIGQMYSIGSGVALDNEKAVFWF 182
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+AA+ + + YS G+G+ + +QA W+ A G+ ++Q
Sbjct: 183 RKAAKQRDANSQDRLGVMYSEGKGVKKNLQQAYAWLSTAVYSGNKESQ 230
>gi|195503005|ref|XP_002098471.1| GE23928 [Drosophila yakuba]
gi|194184572|gb|EDW98183.1| GE23928 [Drosophila yakuba]
Length = 822
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ +++ KAL+ F A G+ + G +Y E + +AA + +AA
Sbjct: 346 YQGGKVTQQDHQKALEYFSLAATAGNAVGFAFLGKLYLEGSDQIKADNDAAFKYFSKAAE 405
Query: 166 LGDPAGQFNLGISYLQ-----EEAVKLL---YQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+GDP GQ LG+ YL+ ++++K L QA+ G V Q QL G GV +
Sbjct: 406 MGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGNMYFTGDGVKTDY 465
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A ++Y A + G+V A YN + ++G G+ S A ++ K ++ G ++L H
Sbjct: 466 KLAFKYYNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERGRWSSRLMHAY 525
Query: 278 GLFTEGEMMKAVVYLELATRAGETAA 303
+ E + KA + L G A
Sbjct: 526 SDYKENRIDKAYMQYSLMAEVGYEVA 551
>gi|422015298|ref|ZP_16361897.1| hypothetical protein OOA_11118 [Providencia burhodogranariea DSM
19968]
gi|414099463|gb|EKT61104.1| hypothetical protein OOA_11118 [Providencia burhodogranariea DSM
19968]
Length = 262
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ QF LG Y+ AV Y +I RA+ +A +G GV +++
Sbjct: 79 GNADAQFRLGTMYVNGFAVSRDYDKAILWYEAAAKQNDTRAETNMATMYAQGLGVTQDIE 138
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+AA W+ +AA+GG V A +N + YS G G+ L + +A W ++AA K+Q G+
Sbjct: 139 KAAYWFKKAAQGGNVIAQFNLAQMYSVGNGVDLDNTKAVFWYRKAAQQRDAKSQDRLGV- 197
Query: 279 LFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
+++EG+ +K A +L A +G + ++ I QLS + +A + D++
Sbjct: 198 MYSEGKGVKKNLQQAYAWLSTAVYSGNKESHKLQEKIANQLSDSELKQAQKLADNY 253
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 24/164 (14%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G + +G V ++ DKA+ + A + T A + MY +
Sbjct: 85 FRLGTMYVNGFAVSRDYDKAILWYEAAAKQNDTRAETNMATMYAQ--------------- 129
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
LG++ E+A +A+ G+V AQ+ LA G GVD + +A WY
Sbjct: 130 ---------GLGVTQDIEKAAYWFKKAAQGGNVIAQFNLAQMYSVGNGVDLDNTKAVFWY 180
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+AA+ ++ + YS G+G+ + +QA W+ A G+
Sbjct: 181 RKAAQQRDAKSQDRLGVMYSEGKGVKKNLQQAYAWLSTAVYSGN 224
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 167 GDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GDP QF LG SY + V + +A G+ AQ++L G V +
Sbjct: 43 GDPKAQFLLGESYFTGKGVSQDFKVAAQWFIKAGNQGNADAQFRLGTMYVNGFAVSRDYD 102
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+A WY AA+ RA N + Y+ G G+ +A W K+AA G+ AQ
Sbjct: 103 KAILWYEAAAKQNDTRAETNMATMYAQGLGVTQDIEKAAYWFKKAAQGGNVIAQFN 158
>gi|307610906|emb|CBX00523.1| TPR repeat protein [Legionella pneumophila 130b]
Length = 305
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G+ N +A+ K A +G A G++Y AI +R+A
Sbjct: 120 GVLYIEGIGISHNDGEAVKWIHKAAEQGFPDAERTLGILYLTGKGVKQNDGEAIIWFRKA 179
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
GD A Q L Y++ EA++ Y A+ G AQY +A+ G+G+
Sbjct: 180 GEHGDLASQRTLSAMYVEGNHTQQNDFEAMRWFYLAAKQGDPIAQYNIAIGFLVGKGMKQ 239
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N EA +W+ AA G +A Y + Y G+G+P +H +A KW+++AA+ G+ AQ
Sbjct: 240 NNIEAMKWFHLAANQGLPQAQYALAAIYHDGQGVPQNHDEALKWLQKAAEQGYPAAQ 296
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+ V +N +A+ F K A +G T+A + GL Y A+ +R+A
Sbjct: 48 GIDYMIGKKVPQNYSEAVKWFQKAAEQGDTMAQRNLGLTYTTGTGVAQNHSKAMKWFRKA 107
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A DP +FNLG+ Y++ EAVK +++A+ G A+ L + G+GV
Sbjct: 108 AEKNDPVAEFNLGVLYIEGIGISHNDGEAVKWIHKAAEQGFPDAERTLGILYLTGKGVKQ 167
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N EA W+ +A E G + + S Y G + +A +W AA G AQ
Sbjct: 168 NDGEAIIWFRKAGEHGDLASQRTLSAMYVEGNHTQQNDFEAMRWFYLAAKQGDPIAQYNI 227
Query: 276 GLGLFTEGEMMK-----AVVYLELATRAG 299
+G F G+ MK A+ + LA G
Sbjct: 228 AIG-FLVGKGMKQNNIEAMKWFHLAANQG 255
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 168 DPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+PA N GI Y+ EAVK +A+ G AQ L L G GV N +
Sbjct: 40 NPADWNNRGIDYMIGKKVPQNYSEAVKWFQKAAEQGDTMAQRNLGLTYTTGTGVAQNHSK 99
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A +W+ +AAE A +N + Y G G+ + +A KW+ +AA+ G A+ G+ L
Sbjct: 100 AMKWFRKAAEKNDPVAEFNLGVLYIEGIGISHNDGEAVKWIHKAAEQGFPDAERTLGI-L 158
Query: 280 FTEGEMMK-----AVVYLELATRAGETAA 303
+ G+ +K A+++ A G+ A+
Sbjct: 159 YLTGKGVKQNDGEAIIWFRKAGEHGDLAS 187
>gi|325266778|ref|ZP_08133451.1| Sel1 repeat superfamily protein [Kingella denitrificans ATCC 33394]
gi|324981780|gb|EGC17419.1| Sel1 repeat superfamily protein [Kingella denitrificans ATCC 33394]
Length = 127
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E A +L + + G + AQYQLA L G GV +L+ A WY +AAE G A +N L
Sbjct: 23 EAAAPVLRRFAEQGDIDAQYQLAFMLEHGLGVKTDLEGAVHWYAKAAEQGDDSAQFNLGL 82
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
Y+ GEG+P + +A KW KRAA + AQ
Sbjct: 83 SYAQGEGVPQDYDEAAKWWKRAAKQDNKDAQ 113
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQAS 192
+D + + EAA + R+ A GD Q+ L G+ E AV +A+
Sbjct: 10 LDTAFAHIDKGNYEAAAPVLRRFAEQGDIDAQYQLAFMLEHGLGVKTDLEGAVHWYAKAA 69
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
G AQ+ L L +G GV + EAA+W+ RAA
Sbjct: 70 EQGDDSAQFNLGLSYAQGEGVPQDYDEAAKWWKRAA 105
>gi|354594573|ref|ZP_09012612.1| TPR repeat SEL1 subfamily [Commensalibacter intestini A911]
gi|353672249|gb|EHD13949.1| TPR repeat SEL1 subfamily [Commensalibacter intestini A911]
Length = 340
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA- 155
+AMV L G ++ G G+ K+ +KA+ FL + + ++ GLMY W + + A
Sbjct: 114 QAMVNL--GGMYRKGSGIPKDNNKAIKYFLLASKENNPKGFLNLGLMYENGWGVPQSYAK 171
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
AI Y++A +GD +LG+ Y Q + A+ +A+ + +A Y L
Sbjct: 172 AIEYYQKAIQMGDDEALASLGVLYEQGLGVKKNTKTAIHYFQKAAQKNNKKALYNLGRIY 231
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV N +A ++Y +AA+ G A+ + + YS G G+ ++A ++ ++AAD
Sbjct: 232 REGDGVPKNYTKAIQYYQKAAQQGDASALSDLGVMYSHGTGVAKDTKKAVEYTQKAADKN 291
Query: 268 HGKAQLEHGLGLFTEGEM 285
AQ G+ + +GE+
Sbjct: 292 DPTAQFNLGVA-YGKGEI 308
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLY 160
G + G V ++ KA+ + + A +G AMV+ G MY + AI +
Sbjct: 81 FNLGVLYDEGIIVPQDYSKAIQYYTQAAQQGDDQAMVNLGGMYRKGSGIPKDNNKAIKYF 140
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
A+ +P G NLG+ Y +A++ +A G A L + +G G
Sbjct: 141 LLASKENNPKGFLNLGLMYENGWGVPQSYAKAIEYYQKAIQMGDDEALASLGVLYEQGLG 200
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V N + A ++ +AA+ +A+YN Y G+G+P ++ +A ++ ++AA G A
Sbjct: 201 VKKNTKTAIHYFQKAAQKNNKKALYNLGRIYREGDGVPKNYTKAIQYYQKAAQQGDASAL 260
Query: 273 LEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 303
+ G+ +++ G + KAV Y + A + A
Sbjct: 261 SDLGV-MYSHGTGVAKDTKKAVEYTQKAADKNDPTA 295
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 87 VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V +S+ A+ ++A+ L G ++ G GV+KN A+ F K A + + A+
Sbjct: 165 VPQSYAKAIEYYQKAIQMGDDEALASLGVLYEQGLGVKKNTKTAIHYFQKAAQKNNKKAL 224
Query: 141 VDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLL 188
+ G +Y E D AI Y++AA GD + +LG+ Y ++AV+
Sbjct: 225 YNLGRIYREGDGVPKNYTKAIQYYQKAAQQGDASALSDLGVMYSHGTGVAKDTKKAVEYT 284
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+A+ AQ+ L + +G N Q++ W +AA+ +VRA + Y+
Sbjct: 285 QKAADKNDPTAQFNLGVAYGKGEIQPINQQKSIEWITKAADQDFVRAQLYLGIIYA 340
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
Q A G+P Q+N+G+ Y Q +AV+ +A+ +A++ L + G
Sbjct: 33 EQLANQGNPEAQYNIGVMYDQGIGVPQNGNKAVEWYEKAAKQRLYQAEFNLGVLYDEGII 92
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +A ++Y +AA+ G +AM N Y G G+P + +A K+ A+ + K
Sbjct: 93 VPQDYSKAIQYYTQAAQQGDDQAMVNLGGMYRKGSGIPKDNNKAIKYFLLASKENNPKGF 152
Query: 273 LEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 303
L GL ++ G KA+ Y + A + G+ A
Sbjct: 153 LNLGL-MYENGWGVPQSYAKAIEYYQKAIQMGDDEA 187
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 132 AARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ------ 181
A +G+ A + G+MY + A+ Y +AA +FNLG+ Y +
Sbjct: 36 ANQGNPEAQYNIGVMYDQGIGVPQNGNKAVEWYEKAAKQRLYQAEFNLGVLYDEGIIVPQ 95
Query: 182 --EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+A++ QA+ G +A L +G G+ + +A +++L A++ + N
Sbjct: 96 DYSKAIQYYTQAAQQGDDQAMVNLGGMYRKGSGIPKDNNKAIKYFLLASKENNPKGFLNL 155
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKA------QLEHGLGL 279
L Y G G+P S+ +A ++ ++A G +A E GLG+
Sbjct: 156 GLMYENGWGVPQSYAKAIEYYQKAIQMGDDEALASLGVLYEQGLGV 201
>gi|195054669|ref|XP_001994247.1| GH11624 [Drosophila grimshawi]
gi|193896117|gb|EDV94983.1| GH11624 [Drosophila grimshawi]
Length = 821
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 13/178 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ ++++ KAL+ F A G+ + G +Y E ++ E A + +A+
Sbjct: 344 YQGGKAIQQDHQKALEYFTLAANAGNAIGFAFLGKLYLEGSEQIKADNETAFKYFSKASE 403
Query: 166 LGDPAGQFNLGISYLQ-----EEAVKLL---YQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+GDP GQ LG+ YL+ ++++K L QA+ G V Q QL G GV +
Sbjct: 404 MGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGTMYFTGNGVKTDY 463
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ A +++ A + G+V A YN + +++G G+ S A ++ K A+ G +L H
Sbjct: 464 KLALKYFNLATQSGHVLAYYNLGVMHAYGMGMLRSCPAAVEFFKNVAERGRWSNRLMH 521
>gi|297171597|gb|ADI22593.1| FOG: TPR repeat, SEL1 subfamily [uncultured verrucomicrobium
HF0500_16O23]
Length = 275
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 70 NKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFL 129
N++ +T +L L DA + A + GRGV + +AL +
Sbjct: 32 NQVKVRYTPKELFQVDLTMAEQGDAKAQTKTA-------DNYAVGRGVEVDFQEALKWYR 84
Query: 130 KGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEE-- 183
K AA+ + A + G MY+ + + A+ + ++A G+ Q NLG+ Y E
Sbjct: 85 KAAAQNESQAQYNLGYMYYNGEALPRDYQKAVEWFIKSAEQGNAGAQCNLGLMYDNGEGV 144
Query: 184 ------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
A+K +A+I G AQ+ + G G+ N +A WY+++A GG++ +
Sbjct: 145 PQDNATAIKWYRKAAIQGEPMAQFNMGWMYDNGEGIPENDTKALEWYVKSARGGHIESPN 204
Query: 238 NTSLCYSFGEGLPLSHRQARKW 259
+ Y G+G P A W
Sbjct: 205 YIGILYDNGDGTPEDDIAAYAW 226
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ +EA+K +A+ +AQY L + G + + Q+A W++++AE G A
Sbjct: 71 GVEVDFQEALKWYRKAAAQNESQAQYNLGYMYYNGEALPRDYQKAVEWFIKSAEQGNAGA 130
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVV 290
N L Y GEG+P + A KW ++AA G AQ G ++ GE + KA+
Sbjct: 131 QCNLGLMYDNGEGVPQDNATAIKWYRKAAIQGEPMAQFNMGW-MYDNGEGIPENDTKALE 189
Query: 291 YLELATRAGETAADHVKNVILQQLSATSRD 320
+ + R G + + ++ T D
Sbjct: 190 WYVKSARGGHIESPNYIGILYDNGDGTPED 219
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 169 PAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
P + + Y +E ++ + G +AQ + A GRGV+ + QEA +WY +AA
Sbjct: 28 PVQTNQVKVRYTPKELFQVDLTMAEQGDAKAQTKTADNYAVGRGVEVDFQEALKWYRKAA 87
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+A YN Y GE LP +++A +W ++A+ G+ AQ GL ++ GE
Sbjct: 88 AQNESQAQYNLGYMYYNGEALPRDYQKAVEWFIKSAEQGNAGAQCNLGL-MYDNGE 142
>gi|167043546|gb|ABZ08242.1| putative TPR repeat region [uncultured marine microorganism
HF4000_APKG2J17]
Length = 369
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 167 GDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q NLG Y + + V K A+ G AQY L L +G+GV N +
Sbjct: 51 GNADAQSNLGQMYRRGQGVPQNDKTAMKWYKLAAKQGLANAQYNLGLMYRKGQGVPQNDK 110
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
A +W+ AAE G+ A +N L Y G+G+P + + A KW+ AA+ GH AQ GL
Sbjct: 111 TAVKWFRLAAEQGFALAQFNLGLMYGKGQGVPQNDKTAVKWITLAAEQGHADAQNSLGL- 169
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAA 303
++ G+ + AV + +LA G+ A
Sbjct: 170 MYENGDGVPQNDKTAVKWFKLAAEQGDAIA 199
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 88/187 (47%), Gaps = 22/187 (11%)
Query: 132 AARGSTLAMVDAGLMY------WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE-- 183
A +G+ A + G MY + DK A+ Y+ AA G Q+NLG+ Y + +
Sbjct: 48 AEQGNADAQSNLGQMYRRGQGVPQNDK--TAMKWYKLAAKQGLANAQYNLGLMYRKGQGV 105
Query: 184 ------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
AVK A+ G AQ+ L L +G+GV N + A +W AAE G+ A
Sbjct: 106 PQNDKTAVKWFRLAAEQGFALAQFNLGLMYGKGQGVPQNDKTAVKWITLAAEQGHADAQN 165
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYL 292
+ L Y G+G+P + + A KW K AA+ G AQ GL ++ GE + AV +
Sbjct: 166 SLGLMYENGDGVPQNDKTAVKWFKLAAEQGDAIAQFNLGL-MYRNGEGVPQNDKTAVKWY 224
Query: 293 ELATRAG 299
LA G
Sbjct: 225 RLAVEQG 231
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 103/259 (39%), Gaps = 44/259 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV +N A+ F A +G LA + GLMY + + A+ A
Sbjct: 96 GLMYRKGQGVPQNDKTAVKWFRLAAEQGFALAQFNLGLMYGKGQGVPQNDKTAVKWITLA 155
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q +LG+ Y + AVK A+ G AQ+ L L G GV
Sbjct: 156 AEQGHADAQNSLGLMYENGDGVPQNDKTAVKWFKLAAEQGDAIAQFNLGLMYRNGEGVPQ 215
Query: 216 NLQEAARWYLRAAEGGYV----------------------------RAMYNTSLCYSFGE 247
N + A +WY A E G A ++ Y G+
Sbjct: 216 NDKTAVKWYRLAVEQGLAGAQTLVEELQKKIADQNELQARAKQGDAPAQFSLGFMYDTGK 275
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV----YLELATRAGETAA 303
G+P + + A KW K AA+ G AQ G+ F +++ V +L +A G A
Sbjct: 276 GVPQNDKTAVKWYKLAAEQGDATAQTNLGIKYFIGKGVVQDYVRTHMWLSIAASQGYKDA 335
Query: 304 DHVKNVILQQLSATSRDRA 322
+ V+ +Q++ + + A
Sbjct: 336 SKKREVVAKQMTTSQIETA 354
>gi|237746366|ref|ZP_04576846.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377717|gb|EEO27808.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 538
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G+ ++ G GV +N KA + K A +G A G++Y E + + +A A SL A
Sbjct: 163 GELYEAGEGVERNDKKAAFWYQKAADQGHLKAQAKLGILYMEGRGVKRDDARAASLLSNA 222
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG+ Y +A++ +A+ G AQ+ L G GV+
Sbjct: 223 ARHGIAVAQANLGLLYASGRGVAASTNKALEWYRKAASQGEAGAQFSLGNMYEDGTGVEK 282
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+L +AA WY +AAE G A N Y G+ +A W +RAAD G +AQ
Sbjct: 283 DLVKAAVWYRKAAEQGNAEAQNNLGRLYMEGDDFEGHEDEAFVWFQRAADQGFAEAQTNL 342
Query: 276 GL----GLFTEGEMMKAVVYLELATRAGE 300
G+ GL + ++ KAV + A G+
Sbjct: 343 GVLYAYGLGVDQDVEKAVYWYRQAAEQGQ 371
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 87 VCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V S N AL R EA G ++ G GV K+L KA + K A +G+ A
Sbjct: 244 VAASTNKALEWYRKAASQGEAGAQFSLGNMYEDGTGVEKDLVKAAVWYRKAAEQGNAEAQ 303
Query: 141 VDAGLMYWEMDKKEA----AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLL 188
+ G +Y E D E A +++AA G Q NLG+ Y E+AV
Sbjct: 304 NNLGRLYMEGDDFEGHEDEAFVWFQRAADQGFAEAQTNLGVLYAYGLGVDQDVEKAVYWY 363
Query: 189 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
QA+ G + LA +RG GV + + A +WY AA+ G + L Y+ G G
Sbjct: 364 RQAAEQGQPEGAFFLAEAYYRGEGVGRDDRLAVKWYEFAAKQGVPESQDRLGLMYTNGIG 423
Query: 249 LPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVY 291
+ + +A W ++AA G+ ++Q + H GL E + +A+ +
Sbjct: 424 VKQDYGKAVSWFRKAARQGYAESQNNLGVLHARGLGVEQDYARAIAW 470
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQAAVLGDPAGQFN 174
K DKA SF K AA+G A G MY+ + E AA Y++AA G QF
Sbjct: 102 KEYDKAFSSFKKAAAKGHAAAQSALGAMYYNGEGTEENESAAAQWYQKAAEHGRMDAQFA 161
Query: 175 LGISYLQEEAVK-------LLYQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
LG Y E V+ YQ A+ GH++AQ +L + GRGV + AA
Sbjct: 162 LGELYEAGEGVERNDKKAAFWYQKAADQGHLKAQAKLGILYMEGRGVKRDDARAASLLSN 221
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLF 280
AA G A N L Y+ G G+ S +A +W ++AA G AQ E G G+
Sbjct: 222 AARHGIAVAQANLGLLYASGRGVAASTNKALEWYRKAASQGEAGAQFSLGNMYEDGTGV- 280
Query: 281 TEGEMMKAVVYLELATRAGETAADH 305
E +++KA V+ A G A +
Sbjct: 281 -EKDLVKAAVWYRKAAEQGNAEAQN 304
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 170 AGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
AG+++ G+ + QE+ A +A+ GH AQ L + G G + N AA+WY
Sbjct: 89 AGEYSDGMRFYQEKEYDKAFSSFKKAAAKGHAAAQSALGAMYYNGEGTEENESAAAQWYQ 148
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 285
+AAE G + A + Y GEG+ + ++A W ++AAD GH KAQ + G+ L+ EG
Sbjct: 149 KAAEHGRMDAQFALGELYEAGEGVERNDKKAAFWYQKAADQGHLKAQAKLGI-LYMEGRG 207
Query: 286 MK 287
+K
Sbjct: 208 VK 209
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 12/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G+ + G + D+A F + A +G A + G++Y +D+ E A+ YRQA
Sbjct: 307 GRLYMEGDDFEGHEDEAFVWFQRAADQGFAEAQTNLGVLYAYGLGVDQDVEKAVYWYRQA 366
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G P G F L +Y + E AVK A+ G +Q +L L G GV
Sbjct: 367 AEQGQPEGAFFLAEAYYRGEGVGRDDRLAVKWYEFAAKQGVPESQDRLGLMYTNGIGVKQ 426
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A W+ +AA GY + N + ++ G G+ + +A W ++A +AQ
Sbjct: 427 DYGKAVSWFRKAARQGYAESQNNLGVLHARGLGVEQDYARAIAWYRKAIAQNLPQAQFNL 486
Query: 276 G 276
G
Sbjct: 487 G 487
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G GV ++++KA+ + + A +G Y+ + A+ Y A
Sbjct: 343 GVLYAYGLGVDQDVEKAVYWYRQAAEQGQPEGAFFLAEAYYRGEGVGRDDRLAVKWYEFA 402
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G P Q LG+ Y VK Y +++ G+ +Q L + RG GV+
Sbjct: 403 AKQGVPESQDRLGLMYTNGIGVKQDYGKAVSWFRKAARQGYAESQNNLGVLHARGLGVEQ 462
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ A WY +A +A +N Y G G+ ARKW +AA G
Sbjct: 463 DYARAIAWYRKAIAQNLPQAQFNLGTMYLQGHGVRQDVDMARKWFMKAASQG 514
>gi|323448016|gb|EGB03920.1| hypothetical protein AURANDRAFT_33364 [Aureococcus anophagefferens]
Length = 248
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 46 RFSCSRSIKSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLL 105
R C R I + GH P + + P L+ + + + EA+ L
Sbjct: 5 RACCCRVICDSCGHKIGDEPCPICRE-------PALKYEEELAVTRRHVENEVPEAIEFL 57
Query: 106 RWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAIS 158
G ++ G G+ K+ +A F + GS AM + G +Y + D ++A
Sbjct: 58 --GICYRDGDYGLVKSGKRAAKLFKRAVELGSVDAMNNLGSLYDTGPCGVKRDSRKAN-Q 114
Query: 159 LYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIA-GHVRAQYQLALCLHR 209
L+R A+ GD QFNL G+ K Y+ S A G+ +AQ+ LA+ L
Sbjct: 115 LFRMASDRGDATAQFNLAQNLRIGDGVQAPDRTEAKHWYERSAAQGYAKAQFSLAVMLDE 174
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF-GEGLPLSHRQARKWMKRAADCGH 268
+ N++E+ R+Y AAE G++ + +N +CY + GEG+ + +A W +AA+ GH
Sbjct: 175 ----EQNVEESFRYYKLAAERGHILSQFNVGICYEYGGEGVDIDLAEAMTWYAQAAEQGH 230
Query: 269 GKAQ 272
AQ
Sbjct: 231 KGAQ 234
>gi|375000842|ref|ZP_09725182.1| Sel1 repeat protein [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353075530|gb|EHB41290.1| Sel1 repeat protein [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
Length = 355
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G ++HG G+ ++ +AL + K A +G A + G +Y E A YR+A
Sbjct: 67 GSFYEHGNGITQDYTQALKWYRKSAEQGYKYAQYNLGTLYDSAKGVPQSYEYAKKWYRKA 126
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G QFNLG+ Y + Y +++ G+ RAQ L + G GV
Sbjct: 127 AEQGLDVAQFNLGLFYSSGRGGEQDYVQSAEWYGKSAAQGYGRAQTNLGMLYLHGLGVTQ 186
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ Q A W+ ++A RAM N Y++G G+P +A W ++AA G +A+ +
Sbjct: 187 DYQVARMWFEKSACSNDSRAMNNLGYMYNYGIGVPKDQAKAVVWYQKAAKFGSPEAKTDL 246
Query: 276 GLGLFT-----EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
L F E K + L A + GE A + +I + + RD A
Sbjct: 247 ALLYFKGQGGLEHNDKKGMELLIQAAQQGEREAQNNLAIIYSKGDVSFRDYA 298
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
E + + +A+ G V+AQ++L G G+ + +A +WY ++AE GY A YN
Sbjct: 46 ETLTQITKAAERGDVKAQFELGSFYEHGNGITQDYTQALKWYRKSAEQGYKYAQYNLGTL 105
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETA 302
Y +G+P S+ A+KW ++AA+ G AQ LGLF Y++ A G++A
Sbjct: 106 YDSAKGVPQSYEYAKKWYRKAAEQGLDVAQFN--LGLFYSSGRGGEQDYVQSAEWYGKSA 163
Query: 303 A 303
A
Sbjct: 164 A 164
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA GD QF LG Y +A+K +++ G+ AQY L +GV
Sbjct: 53 KAAERGDVKAQFELGSFYEHGNGITQDYTQALKWYRKSAEQGYKYAQYNLGTLYDSAKGV 112
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ + A +WY +AAE G A +N L YS G G + Q+ +W ++A G+G+AQ
Sbjct: 113 PQSYEYAKKWYRKAAEQGLDVAQFNLGLFYSSGRGGEQDYVQSAEWYGKSAAQGYGRAQT 172
Query: 274 E------HGLGL 279
HGLG+
Sbjct: 173 NLGMLYLHGLGV 184
>gi|255065895|ref|ZP_05317750.1| Sel1 repeat family protein [Neisseria sicca ATCC 29256]
gi|349609736|ref|ZP_08889113.1| hypothetical protein HMPREF1028_01088 [Neisseria sp. GT4A_CT1]
gi|255049806|gb|EET45270.1| Sel1 repeat family protein [Neisseria sicca ATCC 29256]
gi|348611304|gb|EGY60965.1| hypothetical protein HMPREF1028_01088 [Neisseria sp. GT4A_CT1]
Length = 286
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 85 SLVCKSWNDALRPLRE------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
++ S N A R ++E L G + G G ++ ++A F K A +
Sbjct: 33 NISQNSENQAFRLIQEMAKQGDTRSQLDLGTMYAKGIGTTQDYEQAKYWFEKAAHNDNAE 92
Query: 139 AMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGI----------SYLQEE 183
A + G++Y+E D ++A + +AA G+ F+LGI Y+Q
Sbjct: 93 AQFNLGIIYYEGQGTAQDYRQAKF-WWEKAAEQGNAEAAFDLGIIHYAGIGVPQDYIQ-- 149
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A ++A+ G AQ+ L L + G GV + + A W+ +AA+ G +A YN + Y
Sbjct: 150 AKTWFHKAADQGEDSAQFYLGLMYYSGEGVGQDYKLAKSWFEKAAKKGNAKAQYNLGIMY 209
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRA 298
+ G+G+ ++ +A+ W K+AA+ G+ AQ G+ L+ G+ +A + E A
Sbjct: 210 AEGQGVTQNYPKAKYWYKKAAEQGNANAQNNLGV-LYENGQGVTQNFTQAKSWFEKAAAQ 268
Query: 299 GETAADHVKNVILQQ 313
G T A H I+QQ
Sbjct: 269 GNTLAQHALEYIVQQ 283
>gi|237746421|ref|ZP_04576901.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377772|gb|EEO27863.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 300
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAG 195
G+ +E + A+ ++AA GD Q LG Y + VK Y +A+ AG
Sbjct: 41 GIALYETKNYQDALPYLQKAAEAGDTRAQLYLGNLYREGLGVKKDYAKTIPWFEKAATAG 100
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ RAQ L + G GV+ + Q+AA+W+L+AAE + A + Y G G+ S Q
Sbjct: 101 NPRAQTYLGIAYSEGLGVEPDYQKAAQWFLKAAEQNHAPAQTLVGVMYYKGMGVEQSFPQ 160
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEG----EMMKAVVYLELATRAGETAADHVKNVIL 311
A+KW+++AA G AQ GL ++ EG + KAV L A E A + ++
Sbjct: 161 AQKWLEKAAANGEKDAQSFLGL-IYLEGNDHNDPQKAVELLSKAADQDEPLAQTILGIMY 219
Query: 312 QQLSATSRDRA 322
Q +D A
Sbjct: 220 IQGKYVKQDYA 230
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-MDKKEA---AISLYRQA 163
G + G GV + KA FLK A + A G+MY++ M +++ A +A
Sbjct: 109 GIAYSEGLGVEPDYQKAAQWFLKAAEQNHAPAQTLVGVMYYKGMGVEQSFPQAQKWLEKA 168
Query: 164 AVLGDPAGQFNLGISYLQ-------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
A G+ Q LG+ YL+ ++AV+LL +A+ AQ L + +G+ V +
Sbjct: 169 AANGEKDAQSFLGLIYLEGNDHNDPQKAVELLSKAADQDEPLAQTILGIMYIQGKYVKQD 228
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+A + AE G V A Y G+G+ +A KW++++A G AQ
Sbjct: 229 YAKAEVLLTKGAEAGNVDAATFLGNMYYRGQGVKKDKAKAVKWLEKSAVRGDMDAQ 284
>gi|381394160|ref|ZP_09919878.1| sel1 domain protein repeat-containing protein [Glaciecola punicea
DSM 14233 = ACAM 611]
gi|379330432|dbj|GAB55011.1| sel1 domain protein repeat-containing protein [Glaciecola punicea
DSM 14233 = ACAM 611]
Length = 365
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 14/168 (8%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQ 202
+K+ + I + +Q A GD Q LG+ Y +EA K A+ G +AQ
Sbjct: 22 EKEISKIEVIQQLAQDGDAEAQLELGVMYHSGDGVLKDFKEAAKWYRLAAEQGDAKAQQL 81
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L L H G GV + +EA +WYL +AE G+ Y YS G+G+ ++A KW K
Sbjct: 82 LGLMHHAGDGVPQSSEEAMKWYLLSAEQGFAEIQYVLGRMYSSGDGVLKDSKEAVKWFKL 141
Query: 263 AADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADH 305
+A+ G AQ + G +F GE + +AV + +L+ G+ +A +
Sbjct: 142 SAEQGDASAQYDLG-NMFDRGEGVLKDSKEAVKWFKLSAEQGDASAQY 188
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDP 169
G GV ++ ++A+ +L A +G G MY D + A+ ++ +A GD
Sbjct: 89 GDGVPQSSEEAMKWYLLSAEQGFAEIQYVLGRMYSSGDGVLKDSKEAVKWFKLSAEQGDA 148
Query: 170 AGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
+ Q++LG + + +EAVK ++ G AQY L RG GV + +EA
Sbjct: 149 SAQYDLGNMFDRGEGVLKDSKEAVKWFKLSAEQGDASAQYNLGNMYARGEGVLKDSKEAV 208
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
+W+ + E G A N Y+ GEG+ ++A KW K +A+ G+ AQ G ++
Sbjct: 209 KWFKLSVEQGNAFAQSNLGFMYAIGEGVLKDFKEAEKWYKLSAEQGNAFAQSNLGFMYYS 268
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + G GV K+ +A+ F A +G A D G M+ D KEA + ++
Sbjct: 119 GRMYSSGDGVLKDSKEAVKWFKLSAEQGDASAQYDLGNMFDRGEGVLKDSKEA-VKWFKL 177
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A GD + Q+NLG Y + +EAVK + G+ AQ L G GV
Sbjct: 178 SAEQGDASAQYNLGNMYARGEGVLKDSKEAVKWFKLSVEQGNAFAQSNLGFMYAIGEGVL 237
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +EA +WY +AE G A N Y G G+ ++A K + AA+ G+ AQ
Sbjct: 238 KDFKEAEKWYKLSAEQGNAFAQSNLGFMYYSGHGVLKDFKEAAKNYRLAAEQGNAVAQFN 297
Query: 275 HGLGLFTEGE 284
G ++ GE
Sbjct: 298 LG-NMYAMGE 306
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 13/197 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
+A L G + G GV K+ +A + A +G A GLM+ D E
Sbjct: 39 DAEAQLELGVMYHSGDGVLKDFKEAAKWYRLAAEQGDAKAQQLLGLMHHAGDGVPQSSEE 98
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ Y +A G Q+ LG Y +EAVK ++ G AQY L
Sbjct: 99 AMKWYLLSAEQGFAEIQYVLGRMYSSGDGVLKDSKEAVKWFKLSAEQGDASAQYDLGNMF 158
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
RG GV + +EA +W+ +AE G A YN Y+ GEG+ ++A KW K + + G
Sbjct: 159 DRGEGVLKDSKEAVKWFKLSAEQGDASAQYNLGNMYARGEGVLKDSKEAVKWFKLSVEQG 218
Query: 268 HGKAQLEHGLGLFTEGE 284
+ AQ G ++ GE
Sbjct: 219 NAFAQSNLGF-MYAIGE 234
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G F G GV K+ +A+ F A +G A + G MY D KEA + ++
Sbjct: 155 GNMFDRGEGVLKDSKEAVKWFKLSAEQGDASAQYNLGNMYARGEGVLKDSKEA-VKWFKL 213
Query: 163 AAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+ G+ Q NLG Y E V K ++ G+ AQ L + G GV
Sbjct: 214 SVEQGNAFAQSNLGFMYAIGEGVLKDFKEAEKWYKLSAEQGNAFAQSNLGFMYYSGHGVL 273
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
+ +EAA+ Y AAE G A +N Y+ GEG+ + W
Sbjct: 274 KDFKEAAKNYRLAAEQGNAVAQFNLGNMYAMGEGVLQDFITSYSW 318
>gi|375136622|ref|YP_004997272.1| Sel1-like repeat protein [Acinetobacter calcoaceticus PHEA-2]
gi|325124067|gb|ADY83590.1| Sel1-like repeat protein [Acinetobacter calcoaceticus PHEA-2]
Length = 258
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDP 169
+GV KN ++A GS A G+MY+ E D K A + +AA
Sbjct: 82 QGVVKNYEQAFKWLTVADQNGSMGAKYSLGMMYYTGTGVEKDAKRA-FDYFTKAAAKDHA 140
Query: 170 AGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NLG+ Y + E A + +A+ G+ A+Y LA +G GV + ++A
Sbjct: 141 KAQYNLGVLYDRGEGTAQDYGKAFEWFSRAAKQGYPPAEYNLAHLYKKGHGVSQSDEQAL 200
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+WY +AAE A YN + Y GEG P + + A+KW ++AAD G
Sbjct: 201 KWYTKAAEHNESDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAG 246
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + G GV K+ +A D F K AA+ A + G++Y D+ E A +
Sbjct: 111 GMMYYTGTGVEKDAKRAFDYFTKAAAKDHAKAQYNLGVLY---DRGEGTAQDYGKAFEWF 167
Query: 161 RQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+AA G P ++NL G+S E+A+K +A+ AQY LA G G
Sbjct: 168 SRAAKQGYPPAEYNLAHLYKKGHGVSQSDEQALKWYTKAAEHNESDAQYNLAQMYLNGEG 227
Query: 213 VDFNLQEAARWYLRAAEGGYVRA 235
NLQ A +W+ +AA+ G V A
Sbjct: 228 TPKNLQLAKKWFQQAADAGDVDA 250
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
QY L + RG G + +A W+ RAA+ GY A YN + Y G G+ S QA KW
Sbjct: 143 QYNLGVLYDRGEGTAQDYGKAFEWFSRAAKQGYPPAEYNLAHLYKKGHGVSQSDEQALKW 202
Query: 260 MKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAAD 304
+AA+ H ++ ++ L ++ GE L+LA + + AAD
Sbjct: 203 YTKAAE--HNESDAQYNLAQMYLNGEGTPKN--LQLAKKWFQQAAD 244
>gi|421887655|ref|ZP_16318805.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|379982807|emb|CCF91078.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
Length = 331
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
GK ++ G GV KN A + + A +G A + MYW+ + L Y ++
Sbjct: 143 GKMYEGGDGVEKNHQLAFYWYKQAALQGDATAQENLADMYWDGRGTTKNLLLATLWYLRS 202
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A+ + QF LG +Y + E VK YQ A+ G A + +G GV+
Sbjct: 203 ALQDEVHSQFQLGCAYSEGEGVKQDYQQAMHWYQQAAAQGDSNAYVNIGWMYKQGHGVER 262
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +EA W+ RAAE G V A YN Y G G + +QA W ++ G
Sbjct: 263 DDEEALSWFHRAAEAGNVTAWYNLGFMYRDGRGTAVDVKQALYWFQKVQPTG 314
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 87/215 (40%), Gaps = 22/215 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL- 166
G R+ K+ KA K A +G LA D G W ++ + + Y QA
Sbjct: 71 GLRYSDTPTSMKDNAKASYWLEKAAKQGHKLAPNDLG---WVLEGETGSEPDYAQAVFWY 127
Query: 167 ------GDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRG 212
G Q NLG Y + V+ +Q A++ G AQ LA GRG
Sbjct: 128 CVGTERGHSYAQNNLGKMYEGGDGVEKNHQLAFYWYKQAALQGDATAQENLADMYWDGRG 187
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
NL A WYLR+A V + + YS GEG+ ++QA W ++AA G A
Sbjct: 188 TTKNLLLATLWYLRSALQDEVHSQFQLGCAYSEGEGVKQDYQQAMHWYQQAAAQGDSNAY 247
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
+ G G E + +A+ + A AG A
Sbjct: 248 VNIGWMYKQGHGVERDDEEALSWFHRAAEAGNVTA 282
>gi|338972860|ref|ZP_08628231.1| hypothetical protein CSIRO_1303 [Bradyrhizobiaceae bacterium SG-6C]
gi|338234021|gb|EGP09140.1| hypothetical protein CSIRO_1303 [Bradyrhizobiaceae bacterium SG-6C]
Length = 1089
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRG 212
R AA GDP F +GI Y + V Y +AS G V A ++L +G G
Sbjct: 860 RAAANKGDPGAAFEIGIRYAEGRGVAQDYATAAKWYERASHNGIVPATFRLGTLYEKGLG 919
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ ++ A R+YL AAE G +AM+N ++ + G G +++ A +W ++AA+ G +Q
Sbjct: 920 LKKDIDAARRYYLDAAEKGSAKAMHNLAVLDADGGGAGPNYKSASQWFRKAAERGIADSQ 979
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
G+ G+ E + ++ + LA G+ + ++ I ++L A S A L +
Sbjct: 980 FNLGILYARGIGVEQNLAESYKWFSLAAAQGDADSGRKRDDIAKRLDAQSLAAAKLATQT 1039
Query: 329 WRA 331
+ A
Sbjct: 1040 FVA 1042
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 33/131 (25%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLY 160
R G ++ G G++K++D A +L A +GS AM + ++ + ++A +
Sbjct: 908 FRLGTLYEKGLGLKKDIDAARRYYLDAAEKGSAKAMHNLAVLDADGGGAGPNYKSASQWF 967
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
R+AA G QFNLGI Y RG GV+ NL E+
Sbjct: 968 RKAAERGIADSQFNLGILYA----------------------------RGIGVEQNLAES 999
Query: 221 ARWY-LRAAEG 230
+W+ L AA+G
Sbjct: 1000 YKWFSLAAAQG 1010
>gi|384411620|ref|YP_005620985.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931994|gb|AEH62534.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 202
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
E A+ +++AA G+ Q+ LG++Y E+AV +A+ GH AQY L
Sbjct: 68 EKAVFWWQKAADQGNAKAQYALGVAYANGMGVAQDYEKAVFWYQKAADQGHAAAQYDLGS 127
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
++G GV ++A WY +AA G A YN + Y FG+G+ AR W ++AAD
Sbjct: 128 AYYQGAGVPQGYEKAVFWYQKAANQGDADAQYNLGVAYYFGQGVVQDKGIARFWFQQAAD 187
Query: 266 CGHGKAQ 272
G KA+
Sbjct: 188 KGEAKAK 194
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
++ + A I L ++A GD A QF G +Y Q E+AV +A+ G+ +AQ
Sbjct: 28 QVSRGSAIIELQKKAEA-GDAAAQFVFGFAYSQGKGVARDYEKAVFWWQKAADQGNAKAQ 86
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y L + G GV + ++A WY +AA+ G+ A Y+ Y G G+P + +A W
Sbjct: 87 YALGVAYANGMGVAQDYEKAVFWYQKAADQGHAAAQYDLGSAYYQGAGVPQGYEKAVFWY 146
Query: 261 KRAADCGHGKAQLEHGLGLF 280
++AA+ G AQ G+ +
Sbjct: 147 QKAANQGDADAQYNLGVAYY 166
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A +G + G+GV ++ +KA+ + K A +G+ A G+ Y E
Sbjct: 46 DAAAQFVFGFAYSQGKGVARDYEKAVFWWQKAADQGNAKAQYALGVAYANGMGVAQDYEK 105
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+ Y++AA G A Q++LG +Y Q E+AV +A+ G AQY L +
Sbjct: 106 AVFWYQKAADQGHAAAQYDLGSAYYQGAGVPQGYEKAVFWYQKAANQGDADAQYNLGVAY 165
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+ G+GV + A W+ +AA+ G +A N
Sbjct: 166 YFGQGVVQDKGIARFWFQQAADKGEAKAKEN 196
>gi|349610785|ref|ZP_08890112.1| hypothetical protein HMPREF1028_02087 [Neisseria sp. GT4A_CT1]
gi|348615784|gb|EGY65294.1| hypothetical protein HMPREF1028_02087 [Neisseria sp. GT4A_CT1]
Length = 267
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 52/214 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++ G GV ++ +A+ + K A +G+ A + GL+Y D +AA YR+
Sbjct: 48 GVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGLLYANDSSIHQDYAQAA-EWYRK 106
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------------------------------- 189
AA G P+ Q NLG Y + V+ Y
Sbjct: 107 AAEQGHPSAQNNLGAMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQNNLGVMYEKGQGVR 166
Query: 190 -----------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+A+ G AQ+ L L GRGV + +AA W+ +AAE G A +N
Sbjct: 167 QDYARAVEWFLKAAEQGTATAQFNLGLMYETGRGVRQDYAQAAGWFRKAAEQGDAYAQHN 226
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+L Y+FG G+P ++ A++W+ +A C +G Q
Sbjct: 227 LALMYAFGRGVPQNYTIAKEWLGKA--CINGDQQ 258
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 129 LKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEA 184
L+ A RG+ A + G+MY + A+ YR+AA G Q+NLG+ Y + +
Sbjct: 33 LQAAERGNVKAQNNLGVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGLLYANDSS 92
Query: 185 VKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+ Y +A+ GH AQ L G+GV + +A WY ++A+ GY A
Sbjct: 93 IHQDYAQAAEWYRKAAEQGHPSAQNNLGAMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQ 152
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVY 291
N + Y G+G+ + +A +W +AA+ G AQ GL ++ G + +A +
Sbjct: 153 NNLGVMYEKGQGVRQDYARAVEWFLKAAEQGTATAQFNLGL-MYETGRGVRQDYAQAAGW 211
Query: 292 LELATRAGETAADH 305
A G+ A H
Sbjct: 212 FRKAAEQGDAYAQH 225
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
QA+ G+V+AQ L + +G GV + +A +WY +AAE G A YN L Y+ +
Sbjct: 34 QAAERGNVKAQNNLGVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGLLYANDSSI 93
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAAD 304
+ QA +W ++AA+ GH AQ G ++ G + ++A+ + + + G A
Sbjct: 94 HQDYAQAAEWYRKAAEQGHPSAQNNLG-AMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQ 152
Query: 305 HVKNVILQQLSATSRDRAMLV 325
+ V+ ++ +D A V
Sbjct: 153 NNLGVMYEKGQGVRQDYARAV 173
>gi|290972227|ref|XP_002668857.1| predicted protein [Naegleria gruberi]
gi|284082390|gb|EFC36113.1| predicted protein [Naegleria gruberi]
Length = 479
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQAAVLG--DPAG 171
K+ KA + F KGA +G + G Y E+D + A+ Y +AA +G P
Sbjct: 61 EKDYGKAFEWFTKGAEQGCAESTYKIGYFYANGLEVDTDYSKAMEWYLKAAEMGFTKPIV 120
Query: 172 Q------FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
Q F G+ EA+K +A G A + +G GV+ +L +A WYL
Sbjct: 121 QIGYLYFFGKGVEQDYVEALKWFLKAVEKGSAEAYVSMGNLYSKGTGVERDLSKAMEWYL 180
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
+AAE G A +N Y FG G+ ++ +A +W +AA+ G+ AQ + G LF G
Sbjct: 181 KAAENGCSTAQFNIGRSYYFGFGVERNYSKAVEWYLKAAENGNTSAQFKVGF-LFETG 237
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 32/160 (20%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISL 159
+++ G + G+GV ++ +AL FLK +GS A V G +Y + E A+
Sbjct: 119 IVQIGYLYFFGKGVEQDYVEALKWFLKAVEKGSAEAYVSMGNLYSKGTGVERDLSKAMEW 178
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
Y +AA G QFN+G SY + G GV+ N +
Sbjct: 179 YLKAAENGCSTAQFNIGRSY----------------------------YFGFGVERNYSK 210
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
A WYL+AAE G A + + G+G+ + ++ W
Sbjct: 211 AVEWYLKAAENGNTSAQFKVGFLFETGKGIEKNFKKEVFW 250
>gi|294661318|ref|YP_003573194.1| hypothetical protein Aasi_1811 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336469|gb|ACP21066.1| hypothetical protein Aasi_1811 [Candidatus Amoebophilus asiaticus
5a2]
Length = 208
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ L + G+GV +LQ+A W+ +AAE GYV A + + Y GEG+P + +QA +
Sbjct: 55 AQVNLGVMYEEGKGVRKDLQQAIGWFRKAAEQGYVNAQNSLGVMYRSGEGIPKNVQQAIE 114
Query: 259 WMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQ 313
W ++AA G+ KAQ G ++ GE + +A ++++ A GE AA V+ +
Sbjct: 115 WFRKAAKQGNSKAQFSLGY-MYYRGEEVREDLQQAAIWVKKAAEQGEPAAQFNLGVMYTR 173
Query: 314 LSATSRD 320
RD
Sbjct: 174 GKGVRRD 180
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 12/178 (6%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKE 154
++A + G + HG V ++ A + +LK A + + A V+ G+MY E +
Sbjct: 15 KDAKAHVELGDMYYHGVWVSQDYTAARELYLKAAEQRNADAQVNLGVMYEEGKGVRKDLQ 74
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALC 206
AI +R+AA G Q +LG+ Y ++A++ +A+ G+ +AQ+ L
Sbjct: 75 QAIGWFRKAAEQGYVNAQNSLGVMYRSGEGIPKNVQQAIEWFRKAAKQGNSKAQFSLGYM 134
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+RG V +LQ+AA W +AAE G A +N + Y+ G+G+ +QA KW + A
Sbjct: 135 YYRGEEVREDLQQAAIWVKKAAEQGEPAAQFNLGVMYTRGKGVRRDLQQAVKWYIKCA 192
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 139 AMVDAGLMY----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA 194
A V+ G MY W AA LY +AA + Q NLG+ Y + + V+ Q +I
Sbjct: 19 AHVELGDMYYHGVWVSQDYTAARELYLKAAEQRNADAQVNLGVMYEEGKGVRKDLQQAIG 78
Query: 195 --------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
G+V AQ L + G G+ N+Q+A W+ +AA+ G +A ++ Y G
Sbjct: 79 WFRKAAEQGYVNAQNSLGVMYRSGEGIPKNVQQAIEWFRKAAKQGNSKAQFSLGYMYYRG 138
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
E + +QA W+K+AA+ G AQ G+ ++T G+
Sbjct: 139 EEVREDLQQAAIWVKKAAEQGEPAAQFNLGV-MYTRGK 175
>gi|300115298|ref|YP_003761873.1| Sel1 domain-containing protein repeat-containing protein
[Nitrosococcus watsonii C-113]
gi|299541235|gb|ADJ29552.1| Sel1 domain protein repeat-containing protein [Nitrosococcus
watsonii C-113]
Length = 241
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQ 190
A VDAG ++ E A+ + A GD QF +G+ Y E A K +
Sbjct: 33 ADVDAGREAYKNQDYELALREFMPLAEQGDENAQFYMGLMYANGYGLPKDAEAAEKWFEK 92
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
S V A++ L + ++G+ V ++++A W+ +AA G A +N Y G +P
Sbjct: 93 FSKHLDVSAKFNLGIMYYQGKSVPQDIEKAIAWFKKAATEGDAEAQFNLGFIYDNGNDIP 152
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADH 305
+A KW + AA+ G +AQ G+ +++EG + ++A + +A + G+ A
Sbjct: 153 QDREEALKWYREAANQGIVEAQNNLGV-MYSEGQGIAKDYVQAYFWFNVAAKQGDKNAAK 211
Query: 306 VKNVILQQLSATSRDRAMLVVDSWR 330
+++ + + ++ + A+ + W+
Sbjct: 212 IRDTLAKDMNTSQMAEAIRLTHEWQ 236
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 114 GRGVRKNLDK--ALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQAAVLG 167
GR KN D AL F+ A +G A GLMY + + K EAA + + +
Sbjct: 38 GREAYKNQDYELALREFMPLAEQGDENAQFYMGLMYANGYGLPKDAEAAEKWFEKFSKHL 97
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
D + +FNLGI Y Q E+A+ +A+ G AQ+ L G + + +E
Sbjct: 98 DVSAKFNLGIMYYQGKSVPQDIEKAIAWFKKAATEGDAEAQFNLGFIYDNGNDIPQDREE 157
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
A +WY AA G V A N + YS G+G+ + QA W AA G A
Sbjct: 158 ALKWYREAANQGIVEAQNNLGVMYSEGQGIAKDYVQAYFWFNVAAKQGDKNA 209
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 98 LREAMVLLRWGKR---------FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
LRE M L G + +G G+ K+ + A F K + A + G+MY+
Sbjct: 51 LREFMPLAEQGDENAQFYMGLMYANGYGLPKDAEAAEKWFEKFSKHLDVSAKFNLGIMYY 110
Query: 149 E----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGH 196
+ E AI+ +++AA GD QFNLG Y EEA+K +A+ G
Sbjct: 111 QGKSVPQDIEKAIAWFKKAATEGDAEAQFNLGFIYDNGNDIPQDREEALKWYREAANQGI 170
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
V AQ L + G+G+ + +A W+ AA+ G
Sbjct: 171 VEAQNNLGVMYSEGQGIAKDYVQAYFWFNVAAKQG 205
>gi|269104631|ref|ZP_06157327.1| tPR repeat protein SEL1 subfamily [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161271|gb|EEZ39768.1| tPR repeat protein SEL1 subfamily [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 333
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 34/181 (18%)
Query: 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ----- 190
+TL + D Y+E + A+ LY Q DP ++LGI Y E Y+
Sbjct: 85 ATLTLAD---YYYEEEDYTKALKLYHQLESSQDPYVLYSLGIMYFDGEGTAQDYEKGNEY 141
Query: 191 ---ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
A+ G+ A YQLA + G+GV + EAA+W+ ++A+ G AMYN + Y GE
Sbjct: 142 YLAAAKLGYSDAMYQLAFSYNDGQGVKQDFTEAAKWFQKSADQGDASAMYNLGIAYLNGE 201
Query: 248 GLPLSHRQARKWMKRA-----------------------ADCGHGKAQLEHGLGLFTEGE 284
G+ +A ++ ++A A CG K + L FT+G
Sbjct: 202 GVKKDCARAIQFFEKAIETDEHARSYAKLGDIYYYTDYKAQCGFKKTDYKKSLAYFTQGA 261
Query: 285 M 285
M
Sbjct: 262 M 262
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHR 209
E I Q A P L Y +EE A+KL +Q + Y L +
Sbjct: 68 EQGIKYLNQLAENNHPKATLTLADYYYEEEDYTKALKLYHQLESSQDPYVLYSLGIMYFD 127
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
G G + ++ +YL AA+ GY AMY + Y+ G+G+ +A KW +++AD G
Sbjct: 128 GEGTAQDYEKGNEYYLAAAKLGYSDAMYQLAFSYNDGQGVKQDFTEAAKWFQKSADQGDA 187
Query: 270 KAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVK 307
A G+ + GE +K A+ + E A E A + K
Sbjct: 188 SAMYNLGIA-YLNGEGVKKDCARAIQFFEKAIETDEHARSYAK 229
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 68/194 (35%), Gaps = 57/194 (29%)
Query: 95 LRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----- 149
L ++ VL G + G G ++ +K + +L A G + AM Y +
Sbjct: 109 LESSQDPYVLYSLGIMYFDGEGTAQDYEKGNEYYLAAAKLGYSDAMYQLAFSYNDGQGVK 168
Query: 150 MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK----------------------- 186
D EAA ++++A GD + +NLGI+YL E VK
Sbjct: 169 QDFTEAA-KWFQKSADQGDASAMYNLGIAYLNGEGVKKDCARAIQFFEKAIETDEHARSY 227
Query: 187 --------------------------LLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
L Y Q ++ G+ +QY + G G N +
Sbjct: 228 AKLGDIYYYTDYKAQCGFKKTDYKKSLAYFTQGAMRGNEYSQYMVGYSYRNGHGTYSNFK 287
Query: 219 EAARWYLRAAEGGY 232
A WY A + GY
Sbjct: 288 TALAWYNIAEDNGY 301
>gi|123481611|ref|XP_001323598.1| CAMK family protein kinase [Trichomonas vaginalis G3]
gi|121906466|gb|EAY11375.1| CAMK family protein kinase [Trichomonas vaginalis G3]
Length = 2004
Score = 71.2 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 14/186 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDK--KEAAISLYRQ 162
G +++G V KN++ A + + A G A + GLM +++ K KEAA ++Y +
Sbjct: 396 GILYQNGISVEKNIELAANYYRLAAQSGHREAQLQYGLMLQNGYDIQKNIKEAA-NIYSE 454
Query: 163 AAVLGDPAG--QFNL------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G+P Q+ L G+ +EA KL A+ + AQ A+ L G+GV
Sbjct: 455 SAKQGNPGAMNQYALLLKEGIGVDKNIKEAAKLFKNAADKENAEAQNNFAIMLQNGQGVP 514
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N++ AA+++ ++A+ G + A N C G G+ + K+ K++AD G
Sbjct: 515 KNIKMAAKYFEKSAKNGNIEAQSNYGWCLKVGAGVEKDIELSTKYFKQSADGGSAIGHNY 574
Query: 275 HGLGLF 280
+GL L
Sbjct: 575 YGLALL 580
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDK--K 153
REA L++G ++G ++KN+ +A + + + A +G+ AM L+ E +DK K
Sbjct: 425 REAQ--LQYGLMLQNGYDIQKNIKEAANIYSESAKQGNPGAMNQYALLLKEGIGVDKNIK 482
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLAL 205
EAA L++ AA + Q N I + V K +++ G++ AQ
Sbjct: 483 EAA-KLFKNAADKENAEAQNNFAIMLQNGQGVPKNIKMAAKYFEKSAKNGNIEAQSNYGW 541
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
CL G GV+ +++ + +++ ++A+GG L G+G+ S ++A K +A+
Sbjct: 542 CLKVGAGVEKDIELSTKYFKQSADGGSAIGHNYYGLALLLGQGVHKSDKRAAHQFKLSAE 601
Query: 266 CGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAA 303
L +G+ L+ +G +K A +Y++ + G A
Sbjct: 602 MNDEFGLLNYGMALY-DGIGVKQNYTIAAIYIKKSADKGNNQA 643
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 180 LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV-DFNLQEAARWYLRAAEGGYVRAMYN 238
+ +EA++ A+ G A YQL C G+GV + +LQ A+++Y +AA+ ++ Y
Sbjct: 885 VNDEAIESFKLAADIGIAEAMYQLGRCYEEGKGVKEVDLQLASKYYKKAADLDHIEGCYK 944
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+LC G G+P + A + K+ + H ++L +
Sbjct: 945 YALCCRNGLGVPKNDADALNYFKKGYEFDHDLSKLNYA 982
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLY 160
+ G G +RK+ + L A +G LAM+ G D E ++ +
Sbjct: 1854 FKLGYMLYKGERIRKDPIRGLQYLAMAARQGHILAMIMIGRALKNGDFIGQNIELSLKYF 1913
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
+ A++L DP G N G+S E + + +++ G+V AQ A+ L+ G+ + +++ A
Sbjct: 1914 KAASILDDPVGLLNYGMSQKGGEGAEYVKKSADLGNVEAQCYYAVMLYSGKEIKRDVESA 1973
Query: 221 ARWYLRAAEGGYVRA 235
+ +A+ GY A
Sbjct: 1974 FYYIKLSADQGYSNA 1988
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 19/205 (9%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLM----YWEMDKKEAAISLYRQAAVLGDPAGQ 172
+++ L +A + F A G AM GLM + E A+ +R+AA L
Sbjct: 1613 IKERLIEAANHFKMLADNGDPSAMFIYGLMLRNGFGVKQNLEGAVEYFRRAAKLNHADAC 1672
Query: 173 FNLGISY-LQEEAVKLLYQASIAG-------HVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+N G+ L A + L +A+ H+ A Y LA+ G GV N AA ++
Sbjct: 1673 YNCGLMIRLGFGAKQNLSRAAYYYYLAAKQRHIYASYNLAILHSNGWGVSKNESLAAYYF 1732
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 283
AA GG A N L G G+ + A K+ +R+A G+ Q + L + +EG
Sbjct: 1733 GIAARGGDAAAQANLGLMLKNGIGVEKNIFGAVKYFRRSARQGNATGQNNYAL-ILSEGW 1791
Query: 284 -----EMMKAVVYLELATRAGETAA 303
KA ++ A + G +A
Sbjct: 1792 PGHDPNPEKATIFFRFAAKQGNVSA 1816
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 25/121 (20%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAG 171
++G GV KN AL+ F KG +E D +S A +L + G
Sbjct: 950 RNGLGVPKNDADALNYFKKG----------------YEFDHD---LSKLNYAEMLNEIGG 990
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
+ N+ + A L + + GH A YQ A+ L GRGV +LQ ++ ++LR A
Sbjct: 991 KSNIAL------AANLFRELAYLGHAEAMYQYAIMLRDGRGVPVDLQRSSHYFLRCATIN 1044
Query: 232 Y 232
Y
Sbjct: 1045 Y 1045
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 13/180 (7%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQAAVLGD 168
+G GV KN A F A G A + GLM E A+ +R++A G+
Sbjct: 1717 NGWGVSKNESLAAYYFGIAARGGDAAAQANLGLMLKNGIGVEKNIFGAVKYFRRSARQGN 1776
Query: 169 PAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
GQ N + + E+A A+ G+V A Y A+ L +G G N ++
Sbjct: 1777 ATGQNNYALILSEGWPGHDPNPEKATIFFRFAAKQGNVSAMYNYAIALLKGVGCKRNPKK 1836
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
AA+ ++ G + + + GE + + +++ AA GH A + G L
Sbjct: 1837 AAKILALSSREGDIDSQFKLGYMLYKGERIRKDPIRGLQYLAMAARQGHILAMIMIGRAL 1896
Score = 39.7 bits (91), Expect = 2.2, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLY 160
+G K G GV K+++ + F + A GS + GL + DK+ A +
Sbjct: 539 YGWCLKVGAGVEKDIELSTKYFKQSADGGSAIGHNYYGLALLLGQGVHKSDKRAA--HQF 596
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRG 212
+ +A + D G N G++ VK Y +++ G+ +AQ+ A L G G
Sbjct: 597 KLSAEMNDEFGLLNYGMALYDGIGVKQNYTIAAIYIKKSADKGNNQAQFLYANMLKDGIG 656
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
V+ N AA +Y AA+ G A + + G G+ + +A K+
Sbjct: 657 VERNYSAAAIYYKLAADQGNNDAKFFYAYLLKNGLGIDKNEEEAEKY 703
Score = 38.5 bits (88), Expect = 4.4, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 33/241 (13%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDK-KEAAISL----YRQAAVLGDPAGQFN-- 174
D+A++SF A G AM G Y E KE + L Y++AA L G +
Sbjct: 887 DEAIESFKLAADIGIAEAMYQLGRCYEEGKGVKEVDLQLASKYYKKAADLDHIEGCYKYA 946
Query: 175 ------LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
LG+ +A+ + H ++ A L+ G N+ AA + A
Sbjct: 947 LCCRNGLGVPKNDADALNYFKKGYEFDHDLSKLNYAEMLNEIGGKS-NIALAANLFRELA 1005
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE---- 284
G+ AMY ++ G G+P+ +++ + R A + + L++G+ + E
Sbjct: 1006 YLGHAEAMYQYAIMLRDGRGVPVDLQRSSHYFLRCATINYKDSGLQYGILISEENGINFF 1065
Query: 285 MMKAVVYLELATRAGETAADHVK---------------NVILQQLSATSRDRAMLVVDSW 329
+ + Y LA + +T + N+ L LS + +R+ L++D +
Sbjct: 1066 ITDVLNYFLLALKEKQTKSAKFMYGLMLVTGIGMKRDLNIGLGALSVSGHERSQLIIDFY 1125
Query: 330 R 330
+
Sbjct: 1126 K 1126
>gi|291562354|emb|CBL41170.1| FOG: TPR repeat, SEL1 subfamily [butyrate-producing bacterium
SS3/4]
Length = 291
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 80/187 (42%), Gaps = 14/187 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEAAISLYRQA 163
G + G GV + +A + + GS A+ G+ Y E A LY +A
Sbjct: 81 GICMEQGNGVEADPVQAFWLYQQAVEMGSLNAVCCLGVCYQYGIGTAPDAEKAAELYCKA 140
Query: 164 AVLGDPAGQF--------NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G P GQ +G+ EAV + A+ + Y+L +C G GV+
Sbjct: 141 AEYGSPRGQMLLARAFHDGIGVEADAAEAVHWVRAAAYQRYGEGMYRLGVCYEYGDGVEQ 200
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N + A W+ AAE G AM + CY G G+ S QA W +R A+CG ++ H
Sbjct: 201 NWEHAVHWFREAAESGVSVAMTDLGYCYEKGCGVEQSWEQAFSWYRRGAECGDLRSM--H 258
Query: 276 GLGLFTE 282
LG E
Sbjct: 259 NLGYCYE 265
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDPAGQFNLGIS 178
+ +D F K A GS + + G+ + + EA A LY+QA +G LG+
Sbjct: 60 RMVDCFRKAAYLGSAWGVCNLGICMEQGNGVEADPVQAFWLYQQAVEMGSLNAVCCLGVC 119
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y E+A +L +A+ G R Q LA H G GV+ + EA W AA
Sbjct: 120 YQYGIGTAPDAEKAAELYCKAAEYGSPRGQMLLARAFHDGIGVEADAAEAVHWVRAAAYQ 179
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
Y MY +CY +G+G+ + A W + AA+ G
Sbjct: 180 RYGEGMYRLGVCYEYGDGVEQNWEHAVHWFREAAESG 216
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 102/260 (39%), Gaps = 35/260 (13%)
Query: 11 TGSRFTALQFPITEKD-NRRPELTASARKARIKRRSRFSCSRSIKSTEGHDFASLPFDVL 69
TG +TAL + + + + + + RKA + C+ I +G+ + P
Sbjct: 39 TGDDWTALGNTLWDAEASDKKRMVDCFRKAAYLGSAWGVCNLGICMEQGNGVEADPVQAF 98
Query: 70 NKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFL 129
+ + L A + G +++G G + +KA + +
Sbjct: 99 WLYQQAVEMGSLNAVCCL--------------------GVCYQYGIGTAPDAEKAAELYC 138
Query: 130 KGAARGST-----LAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--- 181
K A GS LA + E D EA + R AA G + LG+ Y
Sbjct: 139 KAAEYGSPRGQMLLARAFHDGIGVEADAAEA-VHWVRAAAYQRYGEGMYRLGVCYEYGDG 197
Query: 182 -----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
E AV +A+ +G A L C +G GV+ + ++A WY R AE G +R+M
Sbjct: 198 VEQNWEHAVHWFREAAESGVSVAMTDLGYCYEKGCGVEQSWEQAFSWYRRGAECGDLRSM 257
Query: 237 YNTSLCYSFGEGLPLSHRQA 256
+N CY G G+ S QA
Sbjct: 258 HNLGYCYEKGRGVEQSWEQA 277
>gi|443693090|gb|ELT94533.1| hypothetical protein CAPTEDRAFT_19559 [Capitella teleta]
Length = 628
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-------EAAISLYRQA 163
++ GRGV N D+AL+ F A G+ AM G MY E + E A Y+++
Sbjct: 246 YQGGRGVDINHDRALNYFRLAAESGNANAMAFLGKMYSEGNSNSVVKPDNETAFEFYKKS 305
Query: 164 AVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+P GQ LG+ Y+ + V + A+ G V Q QL + + G GV
Sbjct: 306 ADKGNPVGQSGLGLMYMYGKGVEKDLTKAFRFFSLAADQGWVDGQLQLGIMYYAGLGVRR 365
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ + A +++ A++ G+V A YN ++ ++ G G+ + A + K A+ G L
Sbjct: 366 DYKMALKYFNLASQSGHVLAFYNLAIMHASGTGVLRACHTACELFKNVAERGKWADLLME 425
Query: 276 GLGLFTEGEMMKAVV-YLELATRAGETAADHVKNVI 310
++ EG + A++ Y+ L E A +V ++
Sbjct: 426 AHAMYREGNVDGAMLKYMFLGELGYEVAQSNVAYLL 461
>gi|307944520|ref|ZP_07659860.1| Sel1 domain-containing protein [Roseibium sp. TrichSKD4]
gi|307772269|gb|EFO31490.1| Sel1 domain-containing protein [Roseibium sp. TrichSKD4]
Length = 371
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISLY 160
+R G+ + G GV ++ KA D F A + A+ + L Y + + E A L
Sbjct: 153 VRLGQLYLLGNGVEQDKKKAADYFEIAAKADNPTALYNLALSYQAGEGRSYDAEKARELL 212
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRG 212
QAA L +P Q++LG+S+L+ K+ L +A+ GH AQ + H+G+G
Sbjct: 213 VQAARLNEPEAQYSLGLSFLEGIDGKINEGQGAFWLGRAARRGHTSAQVYYGILRHQGKG 272
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
+D N EAA W+ RAA G AM + Y+ G G + QA W
Sbjct: 273 LDPNEAEAAAWFERAALAGNPVAMNRLARIYANGRGKTPNQMQAAAW 319
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G+G++ + KA D + AA+G+ A V G +Y E DKK+AA +
Sbjct: 120 GVLHETGQGIKLDYAKAADWYTLAAAQGNAYAAVRLGQLYLLGNGVEQDKKKAA-DYFEI 178
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA +P +NL +SY E+A +LL QA+ AQY L L G
Sbjct: 179 AAKADNPTALYNLALSYQAGEGRSYDAEKARELLVQAARLNEPEAQYSLGLSFLEGIDGK 238
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
N + A W RAA G+ A + G+GL + +A W +RAA G+
Sbjct: 239 INEGQGAFWLGRAARRGHTSAQVYYGILRHQGKGLDPNEAEAAAWFERAALAGN 292
>gi|294673103|ref|YP_003573719.1| hypothetical protein PRU_0335 [Prevotella ruminicola 23]
gi|294472071|gb|ADE81460.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
Length = 1106
Score = 71.2 bits (173), Expect = 7e-10, Method: Composition-based stats.
Identities = 59/182 (32%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQAAVLGDPAGQFNLGISYLQ--- 181
K A G T A G MY E+ K A Y +AA GD Q+NLG+ Y
Sbjct: 864 KAATLGDTNAQFYIGHMY-EIGKGVEKNYVVAAEWYSKAAEQGDARAQYNLGLIYEYGKG 922
Query: 182 -----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
++A++L A+ HV AQ QL + G+GV+ N ++A +AAEGGY A
Sbjct: 923 IEPNLDKAIELYRMAAEQSHVLAQNQLGVKYRLGQGVEQNGEKAFDLIYKAAEGGYSVAQ 982
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELAT 296
N Y+ G G ++ +A +W K++A+ G+ KA L G +A+ + E A
Sbjct: 983 NNLGWMYANGCGTEQNYEKAIEWYKKSAENGYKKAYNGIAWTLHLSGRYEEALPWAEKAV 1042
Query: 297 RA 298
A
Sbjct: 1043 AA 1044
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 12/172 (6%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAG 195
G +Y + A +AA LGD QF +G Y + V+ Y +A+ G
Sbjct: 846 GHLYLNIGDNNLASQWLEKAATLGDTNAQFYIGHMYEIGKGVEKNYVVAAEWYSKAAEQG 905
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
RAQY L L G+G++ NL +A Y AAE +V A + Y G+G+ + +
Sbjct: 906 DARAQYNLGLIYEYGKGIEPNLDKAIELYRMAAEQSHVLAQNQLGVKYRLGQGVEQNGEK 965
Query: 256 ARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
A + +AA+ G+ AQ G G TE KA+ + + + G A
Sbjct: 966 AFDLIYKAAEGGYSVAQNNLGWMYANGCGTEQNYEKAIEWYKKSAENGYKKA 1017
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A + L +A+ G AQ+ + G+GV+ N AA WY +AAE G RA YN L Y
Sbjct: 858 ASQWLEKAATLGDTNAQFYIGHMYEIGKGVEKNYVVAAEWYSKAAEQGDARAQYNLGLIY 917
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAG 299
+G+G+ + +A + + AA+ H AQ + G LG E KA + A G
Sbjct: 918 EYGKGIEPNLDKAIELYRMAAEQSHVLAQNQLGVKYRLGQGVEQNGEKAFDLIYKAAEGG 977
Query: 300 ETAADH 305
+ A +
Sbjct: 978 YSVAQN 983
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 28/173 (16%)
Query: 86 LVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL 145
+V W +A G +++G+G+ NLDKA++ + A + LA G+
Sbjct: 892 VVAAEWYSKAAEQGDARAQYNLGLIYEYGKGIEPNLDKAIELYRMAAEQSHVLAQNQLGV 951
Query: 146 MYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLAL 205
Y + G+ E+A L+Y+A+ G+ AQ L
Sbjct: 952 KY------------------------RLGQGVEQNGEKAFDLIYKAAEGGYSVAQNNLGW 987
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRA----MYNTSLCYSFGEGLPLSHR 254
G G + N ++A WY ++AE GY +A + L + E LP + +
Sbjct: 988 MYANGCGTEQNYEKAIEWYKKSAENGYKKAYNGIAWTLHLSGRYEEALPWAEK 1040
>gi|290988297|ref|XP_002676858.1| predicted protein [Naegleria gruberi]
gi|284090462|gb|EFC44114.1| predicted protein [Naegleria gruberi]
Length = 451
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISL 159
+ G + +G G+ N +K+L+ + +G LA G MY E D K++ + L
Sbjct: 268 FQLGLMYHYGNGIETNTEKSLEHLNNASNQGHPLAQEFLGEMYLFGLGVEKDYKKS-LEL 326
Query: 160 YRQAAVLGD-PAGQFNLGISYLQEEAVK------LLYQASIAGHVRAQYQLALCLHRGRG 212
+ AA G P FN+G Y + V+ L + + ++ + AQY +
Sbjct: 327 FLNAAHSGQSPQSIFNIGFIYQEGMGVERNLDKSLEWYSQVSENPVAQYNVGAIYAERED 386
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+D +A WYL++AE YV A YN + G+G P + R+A +W+ +AA+ GH A
Sbjct: 387 LD----KAYEWYLKSAENDYVDAQYNVGCLCAQGKGTPRNDRKALEWITKAAEAGHENA 441
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 22/223 (9%)
Query: 93 DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK 152
DAL L M LL G+ F ++LDK+L+ F K A G +Y +
Sbjct: 90 DALFMLGN-MYLLGLGEEFA------QDLDKSLEYFEKLHELNYLEAECYLGYIYESKGE 142
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
E A Y +++ G FN+G+++ E A++ +A GH +AQ QL
Sbjct: 143 LEKAFDWYLKSSKKGVRDALFNVGLAFYNGRGTSQNFENAIENFTKAGEIGHAKAQQQLG 202
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G G + + ++ W+ +AA+ G + + G+G+ +QA W +
Sbjct: 203 FMYYYGTGCEQDYVKSYEWHSKAAQNGVPESQSTVAFMLLHGQGVEKDPKQAFDWFTKNG 262
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
D ++Q + GL G E K++ +L A+ G A
Sbjct: 263 DA---ESQFQLGLMYHYGNGIETNTEKSLEHLNNASNQGHPLA 302
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 11/174 (6%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAIS 158
L G F +GRG +N + A+++F K G A G MY+ E D ++
Sbjct: 162 LFNVGLAFYNGRGTSQNFENAIENFTKAGEIGHAKAQQQLGFMYYYGTGCEQDYVKS-YE 220
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAV-KLLYQA----SIAGHVRAQYQLALCLHRGRGV 213
+ +AA G P Q + L + V K QA + G +Q+QL L H G G+
Sbjct: 221 WHSKAAQNGVPESQSTVAFMLLHGQGVEKDPKQAFDWFTKNGDAESQFQLGLMYHYGNGI 280
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ N +++ A+ G+ A Y FG G+ ++++ + AA G
Sbjct: 281 ETNTEKSLEHLNNASNQGHPLAQEFLGEMYLFGLGVEKDYKKSLELFLNAAHSG 334
>gi|437437682|ref|ZP_20756821.1| hypothetical protein SEEE4018_03243 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437601309|ref|ZP_20797553.1| hypothetical protein SEEE0268_04242 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435213295|gb|ELN96205.1| hypothetical protein SEEE4018_03243 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435261079|gb|ELO40240.1| hypothetical protein SEEE0268_04242 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
Length = 223
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGD 168
+G G +N AL+ + + AA+G A G+M+ + + + A++ YR+AA G
Sbjct: 2 YGDGFPQNTQLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGL 61
Query: 169 PAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
PA Q +LGI + +A+ +A+ +AQYQL + GRGV N + A
Sbjct: 62 PAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNA 121
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKW 259
+WYL+AAE G+ A Y+ G +G+P ++QA W
Sbjct: 122 LKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIW 161
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 13 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 72
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 73 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 132
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 133 FTPAQLALG 141
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 20 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 79
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
S RQA W ++AA KAQ + G+ T
Sbjct: 80 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 110
>gi|421377856|ref|ZP_15827945.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421431311|ref|ZP_15880896.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421446885|ref|ZP_15896297.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|437139926|ref|ZP_20682190.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437155225|ref|ZP_20691444.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437807555|ref|ZP_20839817.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|445346559|ref|ZP_21418852.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445362751|ref|ZP_21424395.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|395997161|gb|EJI06202.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396053258|gb|EJI61755.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396062467|gb|EJI70880.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|435131331|gb|ELN18558.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435138093|gb|ELN25120.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435300875|gb|ELO76934.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|444877933|gb|ELY02066.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444883978|gb|ELY07830.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 509
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA+ G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAALQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAALQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPSSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAALQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|221067763|ref|ZP_03543868.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220712786|gb|EED68154.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 445
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK--EAAISLYRQ 162
GK + +G+GV KN D AL A + + GL+Y E KK EA ++ Q
Sbjct: 44 GKAYLYGKGVEKNADDALRWLRLAADQQHAPSQYLLGLVYVLGAEGVKKDPEAGLARIHQ 103
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ Q LG YL+ EAV+ L +A+ G AQ L +G +
Sbjct: 104 AANAGNLDAQNLLGTIYLRGEAVERNAATGVAWLERAAQQGSATAQNSLGFVYRKGELLA 163
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+LQ + RWYL AA+ V A + + Y GEG+ +H +A KW+ AD G KAQL
Sbjct: 164 QDLQVSFRWYLMAAQQADVLAQFTVAEMYYLGEGVEKNHAEAAKWLTPLADKGVQKAQL 222
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 29/212 (13%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMD 151
+ +++A +LL GK G+GV + +A+ A RGS A + G ++ E
Sbjct: 215 KGVQKAQLLL--GKICFEGQGVAPDYKRAVLLLHAVAIRGSGEAYYELGRLFEQGEGEYR 272
Query: 152 KKEAAISLYRQA---------------AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGH 196
+ AI+ Y QA + AG F + Y++ +++ G+
Sbjct: 273 NDKEAIAYYTQALKYQHAAAAERLQQLSAASAEAGSFAQSMEYMEN------LNSALRGN 326
Query: 197 VRAQYQLALCLHRGRGVDF-NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
V AQY + + + G+G D N EAA+W+ AAE GY +A YN Y G+G+ S Q
Sbjct: 327 VLAQYNVGVFQYLGKGFDKPNYAEAAKWFAMAAEQGYAKAQYNLGTLYENGDGVDRSLAQ 386
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
A KW + AA+ AQ G L+ +G+ +K
Sbjct: 387 ALKWYRLAAEQQDAPAQYALGT-LYRDGQGVK 417
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 26/198 (13%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKG-----AARGSTL-----AMVDA 143
A+R EA L G+ F+ G G +N +A+ + + AA L A +A
Sbjct: 249 AIRGSGEAYYEL--GRLFEQGEGEYRNDKEAIAYYTQALKYQHAAAAERLQQLSAASAEA 306
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGI-SYLQE--------EAVKLLYQASIA 194
G M+ E S R G+ Q+N+G+ YL + EA K A+
Sbjct: 307 GSFAQSMEYMENLNSALR-----GNVLAQYNVGVFQYLGKGFDKPNYAEAAKWFAMAAEQ 361
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ +AQY L G GVD +L +A +WY AAE A Y Y G+G+ + R
Sbjct: 362 GYAKAQYNLGTLYENGDGVDRSLAQALKWYRLAAEQQDAPAQYALGTLYRDGQGVKKNAR 421
Query: 255 QARKWMKRAADCGHGKAQ 272
AR+W++RAA GH A+
Sbjct: 422 LAREWLQRAAAQGHAPAK 439
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGL 249
A+ G V AQY+L G+GV+ N +A RW AA+ + + Y L Y G EG+
Sbjct: 31 AAKTGDVAAQYELGKAYLYGKGVEKNADDALRWLRLAADQQHAPSQYLLGLVYVLGAEGV 90
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAAD 304
+ +AA+ G+ AQ G ++ GE ++ V +LE A + G A
Sbjct: 91 KKDPEAGLARIHQAANAGNLDAQNLLGT-IYLRGEAVERNAATGVAWLERAAQQGSATAQ 149
Query: 305 H 305
+
Sbjct: 150 N 150
>gi|429750339|ref|ZP_19283391.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429165409|gb|EKY07464.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 262
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 178 SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
SY Q +K L + G + AQ LALC +G GV + Q+AA WY AA G+ +A
Sbjct: 16 SYTQNADIKTLIAKASKGDIEAQAYLALCYEKGTGVAQSYQKAAMWYESAANKGHAKAQT 75
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EGEMMKAVVYLELAT 296
L G+G+P S+++A +W +RAA+ G+ + Q + G+ + +G VV +E
Sbjct: 76 KLGLLIYKGQGVPQSYKKAAEWFERAANQGYAEGQTKIGICYYKGQGVAQSDVVAVEWWQ 135
Query: 297 RAGE 300
+A E
Sbjct: 136 KAAE 139
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q L + Y + V YQ A+ GH +AQ +L L +++G+GV + +
Sbjct: 33 GDIEAQAYLALCYEKGTGVAQSYQKAAMWYESAANKGHAKAQTKLGLLIYKGQGVPQSYK 92
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+AA W+ RAA GY +CY G+G+ S A +W ++AA+ +G+AQ G
Sbjct: 93 KAAEWFERAANQGYAEGQTKIGICYYKGQGVAQSDVVAVEWWQKAAEQNYGEAQSLLGYA 152
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAA 303
F +G+ + +AV + ELA + G+ A
Sbjct: 153 -FLKGQGVGQSDEEAVAWFELAAQQGDIDA 181
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ G GV ++ KA + A +G A GL+ ++ K+AA + +AA
Sbjct: 45 YEKGTGVAQSYQKAAMWYESAANKGHAKAQTKLGLLIYKGQGVPQSYKKAA-EWFERAAN 103
Query: 166 LGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G GQ +GI Y + + AV+ +A+ + AQ L +G+GV +
Sbjct: 104 QGYAEGQTKIGICYYKGQGVAQSDVVAVEWWQKAAEQNYGEAQSLLGYAFLKGQGVGQSD 163
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+EA W+ AA+ G + A + CY G+G+ S+ +A W +RAA G +AQ+ GL
Sbjct: 164 EEAVAWFELAAQQGDIDAQRDLGNCYFQGKGVDQSYEKAIGWYERAAQQGDKEAQMLLGL 223
Query: 278 ----GLFTEGEMMKAVVYLELATRAGET-AADHVK 307
G T+ KA+ ++E + + T A +++K
Sbjct: 224 CYEQGKGTDRSQAKAIFWIEKSCKNYNTRACEYLK 258
>gi|332309262|ref|YP_004408594.1| Sel1 domain-containing protein, partial [Helicobacter felis ATCC
49179]
gi|326319860|emb|CCA30646.1| Sel1 domain protein repeat-containing protein, partial
[Helicobacter felis ATCC 49179]
Length = 642
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 136/332 (40%), Gaps = 72/332 (21%)
Query: 72 IAASFTLPQL-RAASLVCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKA 124
+A+ + L + + V K + +ALR ++A + R G + +G+GV K+ KA
Sbjct: 149 VASYYNLGHMYQKGQGVPKDYMEALRFYKKASEMGNSKGYTRLGDLYYNGQGVPKDYAKA 208
Query: 125 LDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISY 179
D++ K A +GS A GLMY+E D K+A + Y++A +GD G LG Y
Sbjct: 209 FDNYQKAAEKGSAEAYNKLGLMYYEGKGVPRDYKKA-LGYYQKAGEMGDFRGYIRLGDLY 267
Query: 180 LQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGV--DF-------------- 215
+ V Y +A+ G A +L L + G+GV D+
Sbjct: 268 YNGQGVPKDYAKAFDNYQKAAEKGSAEAYNKLGLMYYEGKGVQQDYPQALEYYTKATKMG 327
Query: 216 --------------------NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
N ++A +Y +A E G + Y G+G+P +++Q
Sbjct: 328 NANSYASLGTFYYDGQGAPRNYKKALEYYQKAGEMGSAKGYTRLGDLYYNGQGVPQNYQQ 387
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETA-------- 302
A K+ +A G G A G ++ G+ + KA+ Y + A G++
Sbjct: 388 ALKYYNKAGAMGDGVAYRTLG-DMYYNGQGVPQDYAKAIDYYKKAAENGDSVAYRILGDM 446
Query: 303 -ADHVKNVILQQLSATSRDRAMLVVDSWRAMP 333
AD K + + A A VV++ + P
Sbjct: 447 YADGAKQAQVSHVEANIAPSAQEVVENTKPNP 478
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAA 156
A R G + +G+GVR++ +AL + K A G +A G MY+ +E A
Sbjct: 77 AQGYTRLGDMYYNGQGVRQDYQQALKYYNKAGAMGDGVAYRTLGDMYYNGQGVSKDEEQA 136
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLH 208
+S Y +AA GD A +NLG Y + EA++ +AS G+ + +L +
Sbjct: 137 VSYYTKAAKEGDVASYYNLGHMYQKGQGVPKDYMEALRFYKKASEMGNSKGYTRLGDLYY 196
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV + +A Y +AAE G A L Y G+G+P +++A + ++A + G
Sbjct: 197 NGQGVPKDYAKAFDNYQKAAEKGSAEAYNKLGLMYYEGKGVPRDYKKALGYYQKAGEMG 255
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 18/217 (8%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAA 156
A +G + +G+GV KN KA F GS G MY+ + A
Sbjct: 41 AQAYYNFGLLYYNGQGVYKNYAKAFQYFQAAGWNGSAQGYTRLGDMYYNGQGVRQDYQQA 100
Query: 157 ISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLH 208
+ Y +A +GD LG Y +E+AV +A+ G V + Y L
Sbjct: 101 LKYYNKAGAMGDGVAYRTLGDMYYNGQGVSKDEEQAVSYYTKAAKEGDVASYYNLGHMYQ 160
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+G+GV + EA R+Y +A+E G + Y G+G+P + +A ++AA+ G
Sbjct: 161 KGQGVPKDYMEALRFYKKASEMGNSKGYTRLGDLYYNGQGVPKDYAKAFDNYQKAAEKGS 220
Query: 269 GKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGE 300
+A + GL ++ EG + KA+ Y + A G+
Sbjct: 221 AEAYNKLGL-MYYEGKGVPRDYKKALGYYQKAGEMGD 256
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+GV K+ ++A+ + K A G + + G MY + D EA + Y++
Sbjct: 120 GDMYYNGQGVSKDEEQAVSYYTKAAKEGDVASYYNLGHMYQKGQGVPKDYMEA-LRFYKK 178
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
A+ +G+ G LG Y + V Y +A+ G A +L L + G+GV
Sbjct: 179 ASEMGNSKGYTRLGDLYYNGQGVPKDYAKAFDNYQKAAEKGSAEAYNKLGLMYYEGKGVP 238
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A +Y +A E G R Y G+G+P + +A ++AA+ G +A +
Sbjct: 239 RDYKKALGYYQKAGEMGDFRGYIRLGDLYYNGQGVPKDYAKAFDNYQKAAEKGSAEAYNK 298
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAG 299
GL ++ EG+ + +A+ Y AT+ G
Sbjct: 299 LGL-MYYEGKGVQQDYPQALEYYTKATKMG 327
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 173 FNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
++LG+ Y + V Y+ + G RA + + G+GV + +A +Y
Sbjct: 535 YSLGVMYRNGQGVPRDYKKAFTYYQKAGEMGDARAYNNIGTMYYNGQGVPQDYAKAIDYY 594
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+AAE G + Y+ + Y G+G+P +++A + ++A + G +A
Sbjct: 595 KKAAEEGSAVSYYSLGVMYRNGQGVPRDYKKAFTYYQKAGEMGDARA 641
>gi|293611220|ref|ZP_06693518.1| hypothetical protein HMPREF0013_03381 [Acinetobacter sp. SH024]
gi|292826471|gb|EFF84838.1| hypothetical protein HMPREF0013_03381 [Acinetobacter sp. SH024]
Length = 230
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDP 169
+GV KN ++A GS A G+MY+ E D K A + +AA
Sbjct: 54 QGVVKNYEQAFKWLTVADQNGSMGAKYSLGMMYYTGTGVEKDAKRA-FDYFTKAAAKDHA 112
Query: 170 AGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NLG+ Y + E A + +A+ G+ A+Y LA +G GV + ++A
Sbjct: 113 KAQYNLGVLYDRGEGTAQDYGKAFEWFSRAAKQGYPPAEYNLAHLYKKGHGVSQSDEQAL 172
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+WY +AAE A YN + Y GEG P + + A+KW + AAD G A+
Sbjct: 173 KWYTKAAEHNESDAQYNLAQMYLNGEGTPKNLQLAKKWFQHAADAGDSDAK 223
>gi|292491596|ref|YP_003527035.1| Sel1 domain-containing protein repeat-containing protein
[Nitrosococcus halophilus Nc4]
gi|291580191|gb|ADE14648.1| Sel1 domain protein repeat-containing protein [Nitrosococcus
halophilus Nc4]
Length = 241
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQ 190
A VDAG ++ E A+ + A G+ QF +G+ Y EEA + +
Sbjct: 33 ADVDAGREAYKNQDYETALREFMPLAEEGNMNAQFYMGLMYANGHGLPQDPEEAQRWFEK 92
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
S V A++ LA+ ++G+ V ++ +A W+ RAAE G A +N Y G G+
Sbjct: 93 FSEQLDVSAKFNLAVMYYQGKSVPQDVPKAVYWFKRAAEEGDPEAQFNLGFIYDNGYGVA 152
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADH 305
+A KW + AA+ G +AQ G+ +++EG + ++A + +A + G+ A+
Sbjct: 153 QDREEAIKWYEEAANQGIVEAQNNLGV-MYSEGQGVAKDYVQAYFWFNVAAKQGDKNAEK 211
Query: 306 VKNVILQQLSATSRDRAMLVVDSWR 330
++ + + ++ + A+ + W+
Sbjct: 212 YRDTLAKDMNTSQVAEAIKLTHEWQ 236
>gi|365879801|ref|ZP_09419202.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365292160|emb|CCD91733.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 677
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166
W ++ G VR + A S LKG+ G V+A ++ E K + A++LY
Sbjct: 215 WYRQAADGGHVRAKVALAF-SHLKGS--GVAEDHVEAARLFAEAAKHDDALALY------ 265
Query: 167 GDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
N+G+ YL + ++ L +A+ ++ A LA +G G + +++
Sbjct: 266 -------NIGLMYLNGDGIEKSVDRAETALRKAARKDYLPAIQTLAEFYAKGLGGEPDMR 318
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 277
EA RWY AAE G V+A + Y+ G G+P S R A +W +AA+ GHG A G+
Sbjct: 319 EAVRWYEAAAERGDVQAQFLVGRFYAAGTGVPPSPRSAARWFLQAAEGGHGTAAFNIGIF 378
Query: 278 ---GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
G ++ KA+ + E A+ AG AA+ + + RD+A
Sbjct: 379 HLNGTGVARDVAKAIHWFEKASEAGLRAAEVQLGRLYASGTGVERDQA 426
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGS------TLAMVDAGLMYWEMDKK 153
+A+ L G + +G G+ K++D+A ++ L+ AAR TLA A + E D +
Sbjct: 260 DALALYNIGLMYLNGDGIEKSVDRA-ETALRKAARKDYLPAIQTLAEFYAKGLGGEPDMR 318
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLAL 205
EA + Y AA GD QF +G Y A + QA+ GH A + + +
Sbjct: 319 EA-VRWYEAAAERGDVQAQFLVGRFYAAGTGVPPSPRSAARWFLQAAEGGHGTAAFNIGI 377
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G GV ++ +A W+ +A+E G A Y+ G G+ +A +W+ +AAD
Sbjct: 378 FHLNGTGVARDVAKAIHWFEKASEAGLRAAEVQLGRLYASGTGVERDQARAERWLGKAAD 437
Query: 266 CGHGKAQLEHGLGLF 280
G +A++ L LF
Sbjct: 438 SGDAEAKV--ALALF 450
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCL 207
AI Y +AA G F L YL + V L +A+ AGH AQ+ LA+
Sbjct: 500 AIIWYTRAAEAGLAEAMFVLARLYLDSKISIPNPVVGVSWLEKAAKAGHAGAQFDLAVLY 559
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV +L++ WY AA+GG+ A YN ++ + G+G +A W + AA+ G
Sbjct: 560 CTGNGVAQSLEKGVAWYEAAAQGGHTFAQYNLAVMTAKGQGCARDPDKAMDWFRTAAESG 619
Query: 268 HGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAA 303
AQ+ G L T + K AV++ + A G A
Sbjct: 620 MAAAQVALGDALATGNGLAKDLDAAVLWFDKAAAQGHEGA 659
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 173 FNLGISYLQEE--AVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAE 229
F GI+ ++E + +A+ +GH AQ ++ LC H GRG +L A WY RAA
Sbjct: 127 FPTGIAVERDEHQGAAWIERAASSGHAEAQARMGDLCRH-GRGGPRDLAAAREWYARAAA 185
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ Y G G+ A W ++AAD GH +A++
Sbjct: 186 QDLADGAFGLGDIYFQGLGVETDPETAVAWYRQAADGGHVRAKV 229
>gi|325577670|ref|ZP_08147945.1| hypothetical protein HMPREF9417_0686 [Haemophilus parainfluenzae
ATCC 33392]
gi|325160415|gb|EGC72541.1| hypothetical protein HMPREF9417_0686 [Haemophilus parainfluenzae
ATCC 33392]
Length = 569
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 20/221 (9%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAGQ 172
VR N D+ L+ A G A D + Y D+ E A Y+ AA GD Q
Sbjct: 331 VRDNFDELLER----AKEGDLDAQKDLAMAYVRGDEIEQNNEEAFKWYKAAAEQGDADAQ 386
Query: 173 FNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+L G+ EEA+K L++++ GH A Y L G V + EA +WY
Sbjct: 387 NSLYNRYAKGEGVEQNSEEAMKWLHRSAEQGHGLAYYNLGFEYSSGDLVRKDELEAIKWY 446
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLF 280
+AA+ A Y Y++G+ + ++ AR++ + A +G+AQ E G+ GL
Sbjct: 447 KKAAKKDVTEAYYQLGFLYTYGDTIKKDYQSAREYYELAGGSWNGEAQNELGILHFNGLG 506
Query: 281 TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
T + KA +Y +LA G + + T R+R
Sbjct: 507 TPKDNAKAFLYFQLAAENGSPEGMYNLGAMYDNGFGTKRNR 547
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKE-AAISLYRQAAV 165
R+ G GV +N ++A+ + A +G LA + G Y D K E AI Y++AA
Sbjct: 392 RYAKGEGVEQNSEEAMKWLHRSAEQGHGLAYYNLGFEYSSGDLVRKDELEAIKWYKKAAK 451
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQAS-----IAG---HVRAQYQLALCLHRGRGVDFNL 217
+ LG Y + +K YQ++ +AG + AQ +L + G G +
Sbjct: 452 KDVTEAYYQLGFLYTYGDTIKKDYQSAREYYELAGGSWNGEAQNELGILHFNGLGTPKDN 511
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+A ++ AAE G MYN Y G G + + A +W K++ + G+ KA
Sbjct: 512 AKAFLYFQLAAENGSPEGMYNLGAMYDNGFGTKRNRKFATQWFKKSCEAGYEKA 565
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
EA K L +A+ G A Y LA LH RG + ++A +WYL+AAE G + A Y
Sbjct: 198 EAQKYLTKAAEMGLPNAMYGLA-NLHDFRG---DKKQAFKWYLKAAENGLIDAYYYVGNA 253
Query: 243 YSFGEGLPLSHRQARKWMKRAA-----DCGHGKAQL-EHGLGLFTEGEMMKAVVYLELAT 296
Y GEG+ ++A KW++ AA D A++ + GLG + + KA + LA
Sbjct: 254 YKRGEGIQQDSQKALKWLELAAEYQMRDAARELAEIYQDGLGNVPQN-LEKAQAFYLLAK 312
Query: 297 RAGETAADHVKNV 309
AGE V+ +
Sbjct: 313 EAGENVERSVQQL 325
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 27/207 (13%)
Query: 85 SLVCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
+L C + ++L L+ +A + + G+ + G+G + DKA+ + + A G L
Sbjct: 7 NLFCSTDKNSLEALKQHAEQGDAEAIYQLGRVYALGKGEEVDYDKAMTLYHRANALGYPL 66
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL------QE-----EAVKL 187
A + G +Y +M + E ++ + Q GD +LG YL Q+ E +K
Sbjct: 67 AANNIGALYDDMGEPEKSVEWFEQGIRQGDKRATISLGRFYLLGIGVEQDTFKGVEMLKK 126
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY------VRAMYNT-S 240
+A ++ AQ + G V N +A +YL A + + +YN
Sbjct: 127 YDNDGLASYLLAQVYDGVI---GYEVPINYPKALEYYLLAEKNKQDLTNEDLMTLYNNLG 183
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCG 267
Y+ E +P ++ +A+K++ +AA+ G
Sbjct: 184 TLYNAHEDIPTNYAEAQKYLTKAAEMG 210
>gi|429755011|ref|ZP_19287692.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429175949|gb|EKY17361.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 815
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%)
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+SY Q+ VK L + + G V+AQ +LA +G+GV + QEA W + AE G ++A
Sbjct: 15 LSYGQDTNVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLKAQ 74
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y + CY G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 75 YQLAQCYFNGKGIPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q L +Y + + V+ YQ ++ G ++AQYQLA C G+G+ + Q
Sbjct: 33 GDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLKAQYQLAQCYFNGKGIPKSPQ 92
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 274
+ W + A+ G A +LCY G+G+ S + +++ A+ + + QL+
Sbjct: 93 KGVEWLTKVADAGNPEAQRELALCYRDGKGVEQSKEKYYALIEKHAEKENPEVQLDLAKA 152
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAAD 304
+ G ++ KA + E A++ G + A+
Sbjct: 153 YHSGEGVTKDVNKAKYWAEQASKNGNSEAE 182
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ + QY LA C + G G+D + ++AA +Y +A Y A + CY GEG+ S +
Sbjct: 729 YAQGQYNLANCYYNGNGIDRSYEKAANYYKLSARKDYAPAQFRLGHCYYHGEGIEQSDSR 788
Query: 256 ARKWMKRAADCGHGKA 271
A W ++A D G KA
Sbjct: 789 AADWFEQACDNGEKKA 804
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 123 KALDSFLKGAARGSTLA---MVDAGLMYWEMDKKEA-AISLYRQAAVLGDPAGQFNLGIS 178
+A++ + A +G+T A + DA L ++K EA AI + +AA GD + LG
Sbjct: 198 EAIERLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKAAKGGDAEAMYQLGNF 257
Query: 179 YLQ----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
Y ++A+ QA+ G+ AQ QLALC + G G + + ++A W L++
Sbjct: 258 YFYGNSPLIGKYYKKAINYYTQAANKGNAAAQAQLALCFYNGIGTNASPKDAFSWILKSV 317
Query: 229 EGGYV-RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM-- 285
+A N +CY+ G G S+ QA + ++AA+ G AQ G L EG++
Sbjct: 318 NTNPTPKAQNNLGVCYAVGIGAHPSNAQALESFQKAAEAGDVTAQYNLGNMLLQEGQLDV 377
Query: 286 MKAVVYLE 293
K YLE
Sbjct: 378 KKGFDYLE 385
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNL- 175
D + +K A +G A + Y++ +EA + L + A GD Q+ L
Sbjct: 20 DTNVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWL-EKVAETGDLKAQYQLA 78
Query: 176 -------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL--- 225
GI ++ V+ L + + AG+ AQ +LALC G+GV+ Q ++Y
Sbjct: 79 QCYFNGKGIPKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVE---QSKEKYYALIE 135
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ AE + + Y GEG+ +A+ W ++A+ G+ +A++
Sbjct: 136 KHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEM 183
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE------EAVKLLYQASIAGHVRAQYQLALCLHR 209
A+ +++AA GD Q+NLG LQE + L +A+ A H+ A +L
Sbjct: 346 ALESFQKAAEAGDVTAQYNLGNMLLQEGQLDVKKGFDYLEKAAAANHLLALKKLGDLYFN 405
Query: 210 GRGVDFNLQEAARWYLRAA------------------EGGYVRAMYNTSLCYSFGEGLPL 251
G+ + + + A +Y +A+ E Y +YN S CY+ G+G+
Sbjct: 406 GKYTNQSFERAFEYYTKASKQTPTPQKEMLDYFYQGQEEAYADVLYNLSQCYAEGKGVKK 465
Query: 252 SHRQARKWMKRAA 264
S R+A KW ++A
Sbjct: 466 SMREAGKWAVKSA 478
>gi|440799995|gb|ELR21038.1| Sel1 repeatcontaining protein [Acanthamoeba castellanii str. Neff]
Length = 810
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
GK + G GV +N +KA + + + A GS A + G Y E A Y +A
Sbjct: 327 GKAYSKGWGVEQNPEKAFEWYTRAAEAGSGEAQCNLGCCYARGQGTPKDMEKARVWYAKA 386
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ Q NLG+ YL+ +A+ LL QA G+++AQ+ L G +
Sbjct: 387 AEQGNVPAQANLGVMYLKGDGIAPDINQAIHLLSQAGNHGNLKAQFHLGTTYFFGDQTER 446
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ +AA W+L+ AE G +N + Y+ G+ + R+A +W+ A + G+
Sbjct: 447 DYCKAAEWFLKGAEQGDAVCAFNVGVMYNNALGVAKNLREAIRWLLLAEEKGY 499
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYR 161
R+G KHG+G KN + A F+K A G A + G Y + A Y
Sbjct: 253 RYGVCLKHGKGTEKNPETAFSWFMKAAEAGLAAAQYNVGWCYRYGCGVARNYDLAFRWYS 312
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA G F +G +Y + E+A + +A+ AG AQ L C RG+G
Sbjct: 313 KAADQHYSHGMFAVGKAYSKGWGVEQNPEKAFEWYTRAAEAGSGEAQCNLGCCYARGQGT 372
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
++++A WY +AAE G V A N + Y G+G+ QA + +A + G+ KAQ
Sbjct: 373 PKDMEKARVWYAKAAEQGNVPAQANLGVMYLKGDGIAPDINQAIHLLSQAGNHGNLKAQF 432
Query: 274 EHGLGLF----TEGEMMKAVVYL 292
G F TE + KA +
Sbjct: 433 HLGTTYFFGDQTERDYCKAAEWF 455
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+EA +A+ AGH A Y+ +CL G+G + N + A W+++AAE G A YN
Sbjct: 233 QEAHDCYKRAAEAGHTEASYRYGVCLKHGKGTEKNPETAFSWFMKAAEAGLAAAQYNVGW 292
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
CY +G G+ ++ A +W +AAD
Sbjct: 293 CYRYGCGVARNYDLAFRWYSKAAD 316
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
QY + C G GV N A RWY +AA+ Y M+ YS G G+ + +A +W
Sbjct: 287 QYNVGWCYRYGCGVARNYDLAFRWYSKAADQHYSHGMFAVGKAYSKGWGVEQNPEKAFEW 346
Query: 260 MKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
RAA+ G G+AQ G G T +M KA V+ A G A
Sbjct: 347 YTRAAEAGSGEAQCNLGCCYARGQGTPKDMEKARVWYAKAAEQGNVPA 394
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 32/184 (17%)
Query: 69 LNKIAASFTLPQLRAASLVCKSWND--ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALD 126
L+++ T P +A+S W++ A + +EAM L G G GV +N +K +
Sbjct: 536 LSQVYTRLTPPDTKASSY----WSERAAGQGHKEAMYDL--GNLLLTGDGVERNTEKGIA 589
Query: 127 SFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK 186
+ GS A+ GL+Y+E + +G Y +A K
Sbjct: 590 WLKRAIEAGSIDAIYRLGLLYYEGKE----------------------VGRDY--RKAFK 625
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
+A+ AG V A Y++ RG GV+ N ++AA+W++RAA G V A Y + Y G
Sbjct: 626 HFTRAANAGDVTAAYRVGKMYARGIGVEQNGKKAAKWFVRAAAQGQVGAFYAEAALYDQG 685
Query: 247 EGLP 250
+P
Sbjct: 686 VLVP 689
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ E+ + L +A AG + A Y+L L + G+ V + ++A + + RAA G V A
Sbjct: 579 GVERNTEKGIAWLKRAIEAGSIDAIYRLGLLYYEGKEVGRDYRKAFKHFTRAANAGDVTA 638
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
Y Y+ G G+ + ++A KW RAA G
Sbjct: 639 AYRVGKMYARGIGVEQNGKKAAKWFVRAAAQGQ 671
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 36/218 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---------------WEMDK 152
G + G ++ KA + FLKGA +G + + G+MY W +
Sbjct: 435 GTTYFFGDQTERDYCKAAEWFLKGAEQGDAVCAFNVGVMYNNALGVAKNLREAIRWLLLA 494
Query: 153 KEAAISLYRQAA--VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRG 210
+E ++GD A + +L + + G QY L+ R
Sbjct: 495 EEKGYDDVPDTMNDIIGDSAAAL-----------LPILTEKAEEGSALGQYYLSQVYTRL 543
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
D + ++ W RAA G+ AMY+ G+G+ + + W+KRA + G
Sbjct: 544 TPPD--TKASSYWSERAAGQGHKEAMYDLGNLLLTGDGVERNTEKGIAWLKRAIEAGSID 601
Query: 271 AQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAA 303
A GL L+ EG+ + KA + A AG+ A
Sbjct: 602 AIYRLGL-LYYEGKEVGRDYRKAFKHFTRAANAGDVTA 638
>gi|303272473|ref|XP_003055598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463572|gb|EEH60850.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 322
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 78 LPQLRAASLVCKSWNDALRPLREAM--VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
LP L+ ++ D PLR+ V + KR+ DKALD + +GA +G
Sbjct: 153 LPDAHFHGLLAQAGADLTTPLRQCNLGVFYKDAKRY----------DKALDWYHRGARQG 202
Query: 136 STLAMVDAGLMYWEMDKKE----AAISLYRQAAVLGDPAGQFNLGISYLQ----EEAVKL 187
+ G +Y + E A+ Y ++A G + Q N+G + + EEA K
Sbjct: 203 CPTCEHNIGHIYSDGHGVEQNIDTALEWYTKSAEKGHASAQNNVGGVHRKKGQHEEAFKW 262
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+A+ G + A+Y L +C G GV N+ EA +W+ +AAE G+ RA N
Sbjct: 263 FMKAANQGDIYAEYNLGICYENGNGVKRNVPEAVKWFTKAAEKGHPRAAEN 313
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 131 GAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------E 182
GA + L + G+ Y + + + A+ Y + A G P + N+G Y +
Sbjct: 166 GADLTTPLRQCNLGVFYKDAKRYDKALDWYHRGARQGCPTCEHNIGHIYSDGHGVEQNID 225
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
A++ +++ GH AQ + +HR +G +EA +W+++AA G + A YN +C
Sbjct: 226 TALEWYTKSAEKGHASAQNNVG-GVHRKKG---QHEEAFKWFMKAANQGDIYAEYNLGIC 281
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKA 271
Y G G+ + +A KW +AA+ GH +A
Sbjct: 282 YENGNGVKRNVPEAVKWFTKAAEKGHPRA 310
>gi|302878785|ref|YP_003847349.1| sporulation domain-containing protein [Gallionella
capsiferriformans ES-2]
gi|302581574|gb|ADL55585.1| Sporulation domain-containing protein [Gallionella
capsiferriformans ES-2]
Length = 304
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQ 200
E D E A +R AA G P QFNLG+ Y EAVK A+ G V AQ
Sbjct: 69 EQDLAEGA-KWFRLAAQQGLPQAQFNLGMMYAVGQGVAQNPAEAVKWYRMAAEQGLVLAQ 127
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
L + G GV N EAARW AAE G +A +N + Y G+G+ ++ +A +W
Sbjct: 128 TNLGVAYISGLGVARNEAEAARWIRLAAEKGETQAQFNLGVMYINGQGVDKNYAEANRWA 187
Query: 261 KRAADCGHGKAQ---LEHGLGLFTEGEMMKAV-----------VYLELATRAGETAADHV 306
RAA GH A+ L+ L +E + + + YL+LA A+
Sbjct: 188 SRAAAQGHENARALMLDLNNRLKSEKSIERPIDAGGETDNLTHYYLQLAAFKSNKEAEKY 247
Query: 307 KNVILQQLSATSRDRAMLVVDSW 329
+ QL+ T ++ D W
Sbjct: 248 IEKMRAQLNPTGHTLSIFSTDGW 270
>gi|145218916|ref|YP_001129625.1| Sel1 domain-containing protein [Chlorobium phaeovibrioides DSM 265]
gi|145205080|gb|ABP36123.1| Sel1 domain protein repeat-containing protein [Chlorobium
phaeovibrioides DSM 265]
Length = 503
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 20/236 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R+ G GV ++ +A+ + + A RG A + G+M +D EAA YR
Sbjct: 102 GMRYSEGVGVSQSGTEAMKWYRRAADRGYARAQFNLGVMCDRGRGVPVDYAEAA-KWYRL 160
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA A Q N+ + Y + EA+K A+ G V AQY LA G GV
Sbjct: 161 AAGQEVAAAQHNISVLYDEGKGVRRDSTEALKWRRLAAEQGIVEAQYLLAHAYRYGGGVL 220
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +EAA+W+ AA G A + ++ Y +GEG+P +A +W RAA+ G +AQ
Sbjct: 221 RDDREAAKWFKLAAAQGNAYAQFELAVMYDYGEGVPQDKFEAVEWYGRAAEQGVPEAQNS 280
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ ++ EGE + +++ + LA G++ A + ++ ++D A V
Sbjct: 281 LAV-MYDEGEGLTRNKEESLYWCRLAAEQGDSVAQNNLGWAYREGDGVAKDYAEAV 335
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
+ DKK+ ++L ++ A G+P QF LG+ Y + EA+K +A+ G+ RAQ
Sbjct: 77 DADKKD--LALLQKEADGGNPKAQFLLGMRYSEGVGVSQSGTEAMKWYRRAADRGYARAQ 134
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ L + RGRGV + EAA+WY AA A +N S+ Y G+G+ +A KW
Sbjct: 135 FNLGVMCDRGRGVPVDYAEAAKWYRLAAGQEVAAAQHNISVLYDEGKGVRRDSTEALKWR 194
Query: 261 KRAADCGHGKAQ 272
+ AA+ G +AQ
Sbjct: 195 RLAAEQGIVEAQ 206
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ +G GV ++ +A++ + + A +G A +MY E + KE ++ R AA
Sbjct: 249 YDYGEGVPQDKFEAVEWYGRAAEQGVPEAQNSLAVMYDEGEGLTRNKEESLYWCRLAAEQ 308
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q NLG +Y + EAVK L A+ G AQ L L G+GV +
Sbjct: 309 GDSVAQNNLGWAYREGDGVAKDYAEAVKWLRLAAGQGVTIAQNNLGLMYLEGQGVKRDEP 368
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
EA R + AA G A N Y G+ + ++ +A KW + AA+
Sbjct: 369 EALRLFRLAAAEGNGYACCNIGEMYVKGQVVEQNYEEAMKWFRLAAE 415
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMV--------DAGLMYWEMDKKEAAISLYRQ 162
+ G+GVR++ +AL A +G A G++ D +EAA ++
Sbjct: 177 YDEGKGVRRDSTEALKWRRLAAEQGIVEAQYLLAHAYRYGGGVL---RDDREAA-KWFKL 232
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ QF L + Y + EAV+ +A+ G AQ LA+ G G+
Sbjct: 233 AAAQGNAYAQFELAVMYDYGEGVPQDKFEAVEWYGRAAEQGVPEAQNSLAVMYDEGEGLT 292
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N +E+ W AAE G A N Y G+G+ + +A KW++ AA G AQ
Sbjct: 293 RNKEESLYWCRLAAEQGDSVAQNNLGWAYREGDGVAKDYAEAVKWLRLAAGQGVTIAQNN 352
Query: 275 HGLGLFTEGEMMK 287
GL ++ EG+ +K
Sbjct: 353 LGL-MYLEGQGVK 364
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 107/267 (40%), Gaps = 21/267 (7%)
Query: 53 IKSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFK 112
+ + +G+ +A V+ + A ++ + + ++ ++ +
Sbjct: 232 LAAAQGNAYAQFELAVMYDYGEGVPQDKFEAVEWYGRAAEQGVPEAQNSLAVM-----YD 286
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGD 168
G G+ +N +++L A +G ++A + G Y E D A+ R AA G
Sbjct: 287 EGEGLTRNKEESLYWCRLAAEQGDSVAQNNLGWAYREGDGVAKDYAEAVKWLRLAAGQGV 346
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
Q NLG+ YL+ EA++L A+ G+ A + +G+ V+ N +EA
Sbjct: 347 TIAQNNLGLMYLEGQGVKRDEPEALRLFRLAAAEGNGYACCNIGEMYVKGQVVEQNYEEA 406
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG---- 276
+W+ AAE A Y Y G+G+ +A KW + A L G
Sbjct: 407 MKWFRLAAEKDGNDAAYWIGWLYEEGKGVLADPDEAAKWYRIAEGRKDPNGLLSIGEMYE 466
Query: 277 LGLFTEGEMMKAVVYLELATRAGETAA 303
GL G + A + A RAGE A
Sbjct: 467 KGLGVPGSISNAEKWYRKACRAGEKDA 493
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+++G GV ++ +A F AA+G+ A + +MY DK EA + Y +AA
Sbjct: 213 YRYGGGVLRDDREAAKWFKLAAAQGNAYAQFELAVMYDYGEGVPQDKFEA-VEWYGRAAE 271
Query: 166 LGDPAGQFNLGISYLQEEAV-----KLLYQASIA---GHVRAQYQLALCLHRGRGVDFNL 217
G P Q +L + Y + E + + LY +A G AQ L G GV +
Sbjct: 272 QGVPEAQNSLAVMYDEGEGLTRNKEESLYWCRLAAEQGDSVAQNNLGWAYREGDGVAKDY 331
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
EA +W AA G A N L Y G+G+ +A + + AA G+G A G
Sbjct: 332 AEAVKWLRLAAGQGVTIAQNNLGLMYLEGQGVKRDEPEALRLFRLAAAEGNGYACCNIGE 391
Query: 278 GLFTEGEMMK 287
++ +G++++
Sbjct: 392 -MYVKGQVVE 400
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFT 281
+ A+GG +A + + YS G G+ S +A KW +RAAD G+ +AQ G+ G
Sbjct: 88 KEADGGNPKAQFLLGMRYSEGVGVSQSGTEAMKWYRRAADRGYARAQFNLGVMCDRGRGV 147
Query: 282 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ +A + LA AA H +V+ + RD
Sbjct: 148 PVDYAEAAKWYRLAAGQEVAAAQHNISVLYDEGKGVRRD 186
>gi|237748158|ref|ZP_04578638.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379520|gb|EEO29611.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 404
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM-----YWEMDKKEAA 156
MV L G + HG+GV ++L+K+L K A RG A + GL Y+ D ++A
Sbjct: 179 MVQLYLGLMYGHGKGVPRDLNKSLFWVEKAADRGLPHAQLARGLFASFSHYYPRDDEKAV 238
Query: 157 ISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
+ L + AA G P QF L G+ E+A+ A+ G+ A+Y ++
Sbjct: 239 LYLTK-AAKQGMPMAQFYLALMYQRGRGVEQSNEQALHWNMLAAEQGYPDAEYAMSRMAE 297
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GV + + W RAA G A Y + Y G+ +P A W +AA G+
Sbjct: 298 LGIGVTADKAWSMMWLDRAAHHGMPLAQYLMGMAYLEGKSVPQDLPVAAAWFYKAAMQGN 357
Query: 269 GKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
AQL G G+ + KAV +LE A AG T A
Sbjct: 358 ADAQLRLGYMYARGIGVPVDKPKAVAWLEKAASAGNTVA 396
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+E ++L+ +++ G VRAQ L G V + EA +W RAA G L
Sbjct: 127 DEGIRLIRRSAEGGFVRAQLYLGTLYANGTHVKADPHEAEKWLSRAAGQGSPMVQLYLGL 186
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 297
Y G+G+P ++ W+++AAD G AQL GL + + KAV+YL A +
Sbjct: 187 MYGHGKGVPRDLNKSLFWVEKAADRGLPHAQLARGLFASFSHYYPRDDEKAVLYLTKAAK 246
Query: 298 AG 299
G
Sbjct: 247 QG 248
>gi|114569086|ref|YP_755766.1| peptidoglycan binding domain-containing protein [Maricaulis maris
MCS10]
gi|114339548|gb|ABI64828.1| Peptidoglycan-binding domain 1 protein [Maricaulis maris MCS10]
Length = 1072
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 163 AAVLGDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
AA G+P ++ LG+ L A LL +A+ G AQY+ L G GV+ NL+
Sbjct: 811 AAAEGNPVARYQLGVRALDAGDAATAAILLRRAAEQGVPAAQYRFGKLLETGEGVEINLE 870
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A RW RAA G+ RAM+N + Y +G G + A +W + AA G +Q L
Sbjct: 871 DARRWTERAANAGHRRAMHNLGVMYYYGSGAAQNMETAARWFQEAALLGLRDSQFNLAL- 929
Query: 279 LFTEGE 284
L+ G+
Sbjct: 930 LYETGD 935
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLG--------ISYLQEE 183
AA G+ +A G+ + A L R+AA G PA Q+ G + E+
Sbjct: 812 AAEGNPVARYQLGVRALDAGDAATAAILLRRAAEQGVPAAQYRFGKLLETGEGVEINLED 871
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A + +A+ AGH RA + L + + G G N++ AARW+ AA G + +N +L Y
Sbjct: 872 ARRWTERAANAGHRRAMHNLGVMYYYGSGAAQNMETAARWFQEAALLGLRDSQFNLALLY 931
Query: 244 SFGEGLPLSHRQARKWMKRAA 264
G+G+PLS A W AA
Sbjct: 932 ETGDGVPLSLPDAFAWFSIAA 952
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 24/123 (19%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R+GK + G GV NL+ A + A G AM + G+MY+
Sbjct: 854 RFGKLLETGEGVEINLEDARRWTERAANAGHRRAMHNLGVMYY----------------- 896
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
+ G + E A + +A++ G +Q+ LAL G GV +L +A W+
Sbjct: 897 -------YGSGAAQNMETAARWFQEAALLGLRDSQFNLALLYETGDGVPLSLPDAFAWFS 949
Query: 226 RAA 228
AA
Sbjct: 950 IAA 952
>gi|354594420|ref|ZP_09012459.1| hypothetical protein CIN_11550 [Commensalibacter intestini A911]
gi|353672096|gb|EHD13796.1| hypothetical protein CIN_11550 [Commensalibacter intestini A911]
Length = 621
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G G+ KN++K + K A G+ A+ G +Y++ + A + +A
Sbjct: 151 GYAYFKGIGIAKNIEKGMQYLQKSADNGNVKAIFYIGSLYYDGQSFPKNPKKAFPYFEKA 210
Query: 164 AVLGDPAGQFNLGISY-----LQEEAVKLL--YQASIAGHVRAQYQLALCLHRGRGVDFN 216
A G+ QF LG+ Y ++++ K + Y+ S H A Y LA G GV+ N
Sbjct: 211 AYKGNTDAQFYLGLMYANGIGVEQDYSKAIYWYEKSSKTHPTAAYNLAKMYKEGLGVEVN 270
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
A +AA G V+A Y + Y G+ +P +A W ++AA G+ A +
Sbjct: 271 YNTAFELLKKAANGNNVQAQYGLANLYDLGDKIPQDSSKAAFWYEKAAKQGNIDA--AYA 328
Query: 277 LG-LFTEG-----EMMKAVVYLELATRAGETAA 303
LG ++ EG + K YLE A + G A
Sbjct: 329 LGEMYLEGRGVGEDFTKGFQYLEQAAQNGNADA 361
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQAAVL 166
+ G G ++ KA + + AA GS A G+MY + IS Y+QAA
Sbjct: 46 YIQGDGNSQDFKKAREYLEQSAAAGSDNAQYMLGVMYEKGQGAPQDISKALEYYKQAAKK 105
Query: 167 GDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
++ LG Y EA+K +A+ + A+Y L +G G+ N++
Sbjct: 106 NHAKAEYALGTMYDHARGVPEDHAEAIKWYEKAAKQNNSSAEYALGYAYFKGIGIAKNIE 165
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 277
+ ++ ++A+ G V+A++ Y G+ P + ++A + ++AA G+ AQ GL
Sbjct: 166 KGMQYLQKSADNGNVKAIFYIGSLYYDGQSFPKNPKKAFPYFEKAAYKGNTDAQFYLGLM 225
Query: 278 ---GLFTEGEMMKAVVYLELATRAGETAA 303
G+ E + KA+ + E +++ TAA
Sbjct: 226 YANGIGVEQDYSKAIYWYEKSSKTHPTAA 254
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAIS 158
+ G + G+ KN KA F K A +G+T A GLMY E D +A I
Sbjct: 183 IFYIGSLYYDGQSFPKNPKKAFPYFEKAAYKGNTDAQFYLGLMYANGIGVEQDYSKA-IY 241
Query: 159 LYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRG 210
Y +++ P +NL G+ A +LL +A+ +V+AQY LA G
Sbjct: 242 WYEKSSKT-HPTAAYNLAKMYKEGLGVEVNYNTAFELLKKAANGNNVQAQYGLANLYDLG 300
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
+ + +AA WY +AA+ G + A Y Y G G+ + +++++AA G+
Sbjct: 301 DKIPQDSSKAAFWYEKAAKQGNIDAAYALGEMYLEGRGVGEDFTKGFQYLEQAAQNGNAD 360
Query: 271 AQLE 274
AQL+
Sbjct: 361 AQLK 364
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 172 QFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
QFN Y+Q ++A + L Q++ AG AQY L + +G+G ++ +A +
Sbjct: 39 QFNRANMYIQGDGNSQDFKKAREYLEQSAAAGSDNAQYMLGVMYEKGQGAPQDISKALEY 98
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF--- 280
Y +AA+ + +A Y Y G+P H +A KW ++AA + A+ G F
Sbjct: 99 YKQAAKKNHAKAEYALGTMYDHARGVPEDHAEAIKWYEKAAKQNNSSAEYALGYAYFKGI 158
Query: 281 -TEGEMMKAVVYLELATRAGETAA 303
+ K + YL+ + G A
Sbjct: 159 GIAKNIEKGMQYLQKSADNGNVKA 182
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 14/179 (7%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTL-AMVDAGLMYWEMDK----KEAAISLYRQA 163
K +K G GV N + A + LK AA G+ + A +Y DK A Y +A
Sbjct: 259 KMYKEGLGVEVNYNTAFE-LLKKAANGNNVQAQYGLANLYDLGDKIPQDSSKAAFWYEKA 317
Query: 164 AVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + LG YL+ V + L QA+ G+ AQ ++A +G V
Sbjct: 318 AKQGNIDAAYALGEMYLEGRGVGEDFTKGFQYLEQAAQNGNADAQLKIASIYFKGINVPI 377
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY ++AE A+Y Y G +P +A K+ + AA+ G AQL+
Sbjct: 378 DHNKALEWYQKSAEQKNKVALYTLGNIYEQGLDVPKDISKAVKYYQEAAEGGDVDAQLK 436
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
Y+ AG + AQ+ A +G G + ++A + ++A G A Y + Y G+
Sbjct: 27 FYKTIRAGFIEAQFNRANMYIQGDGNSQDFKKAREYLEQSAAAGSDNAQYMLGVMYEKGQ 86
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE------GEMMKAVVYLELATRAGET 301
G P +A ++ K+AA H KA E+ LG + + +A+ + E A + +
Sbjct: 87 GAPQDISKALEYYKQAAKKNHAKA--EYALGTMYDHARGVPEDHAEAIKWYEKAAKQNNS 144
Query: 302 AADH 305
+A++
Sbjct: 145 SAEY 148
>gi|290986591|ref|XP_002676007.1| predicted protein [Naegleria gruberi]
gi|284089607|gb|EFC43263.1| predicted protein [Naegleria gruberi]
Length = 368
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 99 REAMVLLRW-GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI 157
+E + + + G + G G+ K++ KA F K A +G+ + E A
Sbjct: 57 KENLTIYNYLGNCYLEGSGLEKDIKKAQYWFEKSALKGNAYGQFGVASCHDENHSYTKAF 116
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHR 209
Y++AA GD FN+ Y E V+ +++ G AQY++ +
Sbjct: 117 EWYKKAADHGDSNALFNVAYCYEWGEGVEKDLSKSFEWFLKSAEKGDAEAQYRIGMRYTM 176
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G+GV+ +L +A WY ++++ GY+ +M+ Y+ G+G ++ KW+ RA++
Sbjct: 177 GKGVERDLYKAFNWYYKSSKNGYINSMFQLGYMYASGKGTSFDGAKSLKWLSRASE 232
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEA--------VKLLYQASIAGHVRAQYQLALCLH 208
+ L + A LGD QF+L Y E +K L + ++ L C
Sbjct: 12 VELMIKGAQLGDYTMQFDLANYYKTSEQHSEAIQWFLKALAHNNKKENLTIYNYLGNCYL 71
Query: 209 RGRGVDFNLQEAARW--------------------------------YLRAAEGGYVRAM 236
G G++ ++++A W Y +AA+ G A+
Sbjct: 72 EGSGLEKDIKKAQYWFEKSALKGNAYGQFGVASCHDENHSYTKAFEWYKKAADHGDSNAL 131
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYL 292
+N + CY +GEG+ ++ +W ++A+ G +AQ + + +G E ++ KA +
Sbjct: 132 FNVAYCYEWGEGVEKDLSKSFEWFLKSAEKGDAEAQYRIGMRYTMGKGVERDLYKAFNWY 191
Query: 293 ELATRAG 299
+++ G
Sbjct: 192 YKSSKNG 198
>gi|237746450|ref|ZP_04576930.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377801|gb|EEO27892.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 1527
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 119/281 (42%), Gaps = 60/281 (21%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
EA LL G+ ++ GRGV ++ KA K AA+ A LM D K
Sbjct: 471 EAQYLL--GQAYRDGRGVPEDKQKARQWLEKAAAQNHAAAKSAYALMLGNGEGGPADPKT 528
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALC 206
A L +AA GDP G + G + L + A++ + +A+ G+ AQY +
Sbjct: 529 GA-RLLLEAAQQGDPQGMYFRGQAILAHDSSPESAKTALRWISEAAQKGYANAQYWMGTE 587
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC------------------------ 242
H G+ + NL+ A WY RAAE GY A Y + C
Sbjct: 588 NHTGKRIPKNLKAACEWYRRAAEQGYATAQYWYAHCLQEGTSDAQDVSKALVWFEKAAKN 647
Query: 243 ------YSF------GEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGE 284
Y+ GEG+P + AR+W ++AA+ GH KAQ L GLG E
Sbjct: 648 GNADAQYTLGILNHNGEGIPKNLEAARRWYRQAAEQGHVKAQYWLATCLLEGLGGPENPE 707
Query: 285 MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+A E A R G+T A + ++ S T+++ AM +
Sbjct: 708 --EAFALYEKAARQGDTKAQYKLALLYTNASGTAKNDAMAL 746
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ 181
D L L GA R S LA G W AA + +AA G+P Q+ LG+ YL
Sbjct: 68 DDPLMKTLTGAIRASGLA----GKPDWH-----AARLRFEEAAKAGEPYAQYFLGLMYLS 118
Query: 182 --------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
++A Q++ AQY LA C +GRG + +EA WY AAE G+V
Sbjct: 119 GKGTTVNPQKAFDWFLQSARQNLPDAQYWLAGCYAKGRGTAKSEREAMYWYRIAAENGHV 178
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A L +G GLP + ++A W+++AA G+ +AQ
Sbjct: 179 GAQTGMGLALLYGVGLPQNEKEAAGWLEKAAHAGNAQAQ 217
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 12/181 (6%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEA-AISLYRQAAVLGD 168
G G +N ++A + K A +G T A L+Y K +A A+ +AA GD
Sbjct: 698 EGLGGPENPEEAFALYEKAARQGDTKAQYKLALLYTNASGTAKNDAMALQWLEKAAENGD 757
Query: 169 PAGQFNLGISY-----LQE--EAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
PA Q+ LG+ L E EA + Y +A+ H AQY L + G G + N EA
Sbjct: 758 PAAQYRLGVENHIGKRLPENPEAARQWYRKAADQSHAEAQYWLGVLTLNGEGGEKNPAEA 817
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
RW ++A+ G+ A Y L + G+ +P + +AR+W+++AA H AQ +GL L
Sbjct: 818 FRWMEKSAKNGHAEAQYQLGLAFRDGDIIPENKPKARQWLEKAAAQNHANAQHAYGLMLL 877
Query: 281 T 281
Sbjct: 878 N 878
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL---- 166
++ G G+ ++ +A + + AA G+ AM +AGL +D + A R A +L
Sbjct: 1238 YREGLGLARDDAQAFYWYSQSAASGNVEAMREAGLAL--IDGRGTAKDESRGATLLHAAA 1295
Query: 167 --GDPAGQFNLGISYL------QEEAVKL--LYQASIAGHVRAQYQLALCLHRGRGVDFN 216
DPA Q++L + Y+ Q+ A L +A+ AQY+LA +G V+ +
Sbjct: 1296 RQDDPAAQYHLALLYIYGIGLPQDRATGFGWLEKAANGDDEIAQYRLARAYDKGFYVEKD 1355
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ---- 272
++A W +AA+ + A Y+ + Y G G+P H +A W AA GH AQ
Sbjct: 1356 EKKAFYWTEKAAQHDFAEARYDLGMRYQMGLGVPKDHAKAFHWHLLAAKAGHRDAQSALA 1415
Query: 273 --LEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
E GLG T+ + KA + R G+ A
Sbjct: 1416 FLYEQGLG--TQKDTKKAFYWYTEGARDGDPTA 1446
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----------EMDKKEAAISLYRQA 163
G+ + KNL A + + + A +G A YW + A+ + +A
Sbjct: 591 GKRIPKNLKAACEWYRRAAEQGYATAQ------YWYAHCLQEGTSDAQDVSKALVWFEKA 644
Query: 164 AVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ Q+ LGI E + + QA+ GHV+AQY LA CL G G
Sbjct: 645 AKNGNADAQYTLGILNHNGEGIPKNLEAARRWYRQAAEQGHVKAQYWLATCLLEGLGGPE 704
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N +EA Y +AA G +A Y +L Y+ G + A +W+++AA+ G AQ
Sbjct: 705 NPEEAFALYEKAARQGDTKAQYKLALLYTNASGTAKNDAMALQWLEKAAENGDPAAQYRL 764
Query: 276 GL 277
G+
Sbjct: 765 GV 766
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 42/250 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGA---------------ARGSTLAMVDAGLMYWEMDK 152
G + G+G N KA D FL+ A A+G A + MYW
Sbjct: 113 GLMYLSGKGTTVNPQKAFDWFLQSARQNLPDAQYWLAGCYAKGRGTAKSEREAMYW---- 168
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLA 204
YR AA G Q +G++ L ++EA L +A+ AG+ +AQY L
Sbjct: 169 -------YRIAAENGHVGAQTGMGLALLYGVGLPQNEKEAAGWLEKAAHAGNAQAQYHLY 221
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC----YSFGEGLPLSHRQARKWM 260
G G+ N EA +W +R+A+GG+ +A + ++ YS + P +QA +W+
Sbjct: 222 KQYKNGAGLPQNPDEARKWLVRSAKGGWPQAQLSLAMAYLLRYSRQKDNPDEAKQAVQWV 281
Query: 261 KRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSA 316
+ AA+ +A G GL +M KA + A AG+ + ++ +L
Sbjct: 282 EEAAERNDLEATRLMGSLYQSGLAVGVDMKKAAYWYRRAAEAGDAESQNLYGKMLTAGVG 341
Query: 317 TSRDRAMLVV 326
+++R V+
Sbjct: 342 VAQNRKEAVL 351
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNL-------- 175
F + A G A GLMY + A + Q+A P Q+ L
Sbjct: 97 FEEAAKAGEPYAQYFLGLMYLSGKGTTVNPQKAFDWFLQSARQNLPDAQYWLAGCYAKGR 156
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G + + EA+ A+ GHV AQ + L L G G+ N +EAA W +AA G +A
Sbjct: 157 GTAKSEREAMYWYRIAAENGHVGAQTGMGLALLYGVGLPQNEKEAAGWLEKAAHAGNAQA 216
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
Y+ Y G GLP + +ARKW+ R+A G +AQL
Sbjct: 217 QYHLYKQYKNGAGLPQNPDEARKWLVRSAKGGWPQAQL 254
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G GV K+ KALD + A +G A G++Y + + A + +AA +P
Sbjct: 1133 GNGVPKDTGKALDILVPVAEKGQPEAQNLLGVLYSKGMGVPQNAKMACLWFEKAARQDEP 1192
Query: 170 AGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
GQF L A C G G + + +AA WY R+AE
Sbjct: 1193 GGQFGL----------------------------ARCYDTGDGGEQDFAKAAHWYTRSAE 1224
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF----TEGEM 285
G+ +A Y + Y G GL QA W ++A G+ +A E GL L T +
Sbjct: 1225 AGFPKAQYALGILYREGLGLARDDAQAFYWYSQSAASGNVEAMREAGLALIDGRGTAKDE 1284
Query: 286 MKAVVYLELATRAGETAADH 305
+ L A R + AA +
Sbjct: 1285 SRGATLLHAAARQDDPAAQY 1304
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 12/168 (7%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQ 162
+GK G GV +N +A+ K AA+ T A + G + + + E AI +
Sbjct: 332 YGKMLTAGVGVAQNRKEAVLWLEKAAAQDHTEAGLLLGALLFHDESGVADPEKAIPYLKS 391
Query: 163 AAVLGDPAGQFNLGISYL------QEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
AA GD Q +G +Y ++E ++ +A+ G +Q LA H G+GV
Sbjct: 392 AAEKGDIQAQNMMGGAYFAGKGVAKDEGQAFIWFEKAAQYGDPLSQLNLARMYHAGQGVA 451
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ +A +W RAAE G A Y Y G G+P ++AR+W+++
Sbjct: 452 KDETKARKWLSRAAENGQPEAQYLLGQAYRDGRGVPEDKQKARQWLEK 499
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 8/168 (4%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALC 206
D E A + R GD L I+ E+ A LL A+ G A + L C
Sbjct: 998 DPAENAPPVTRDDNARGDIVEALQLLIAPDSEKNDGKAFALLENAAQTGDPTALHYLGYC 1057
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
GRG + ++A +L+AAE GY A Y T G G+ + +QA W+++A+
Sbjct: 1058 YQEGRGTPQDPKKAFASFLQAAEAGYAEAQYMTGKALWNGHGVAKNEKQAAFWIEKASRN 1117
Query: 267 GHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
G+ A G LG + KA+ L G+ A ++ V+
Sbjct: 1118 GNLDASFVLGYMTLLGNGVPKDTGKALDILVPVAEKGQPEAQNLLGVL 1165
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%)
Query: 172 QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
Q LG+ +A A+ AGH AQ LA +G G + ++A WY A G
Sbjct: 1383 QMGLGVPKDHAKAFHWHLLAAKAGHRDAQSALAFLYEQGLGTQKDTKKAFYWYTEGARDG 1442
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A++ CY G G P+ ++ ++ AA+ G AQ
Sbjct: 1443 DPTALFLLGNCYLSGTGTPIDKKKGLALVREAAERGQPGAQ 1483
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 14/177 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
+ + G KN AL K A G A G+ + K+ EAA YR+AA
Sbjct: 732 YTNASGTAKNDAMALQWLEKAAENGDPAAQYRLGVEN-HIGKRLPENPEAARQWYRKAAD 790
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
Q+ LG+ L EA + + +++ GH AQYQL L G + N
Sbjct: 791 QSHAEAQYWLGVLTLNGEGGEKNPAEAFRWMEKSAKNGHAEAQYQLGLAFRDGDIIPENK 850
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+A +W +AA + A + L GEG P W+ +A G +A+ +
Sbjct: 851 PKARQWLEKAAAQNHANAQHAYGLMLLNGEGGPADPASGASWLVKAGKQGPAQARYQ 907
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCL 207
A + +AA GDP Q NL G++ + +A K L +A+ G AQY L
Sbjct: 421 AFIWFEKAAQYGDPLSQLNLARMYHAGQGVAKDETKARKWLSRAAENGQPEAQYLLGQAY 480
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + Q+A +W +AA + A +L GEG P + + + AA G
Sbjct: 481 RDGRGVPEDKQKARQWLEKAAAQNHAAAKSAYALMLGNGEGGPADPKTGARLLLEAAQQG 540
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 76/216 (35%), Gaps = 48/216 (22%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A +L AA GDP LG Y + ++A QA+ AG+ AQY L
Sbjct: 1035 AFALLENAAQTGDPTALHYLGYCYQEGRGTPQDPKKAFASFLQAAEAGYAEAQYMTGKAL 1094
Query: 208 HRGRGVDFNLQEAARWYLRA------------------------------------AEGG 231
G GV N ++AA W +A AE G
Sbjct: 1095 WNGHGVAKNEKQAAFWIEKASRNGNLDASFVLGYMTLLGNGVPKDTGKALDILVPVAEKG 1154
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMK 287
A + YS G G+P + + A W ++AA Q + G E + K
Sbjct: 1155 QPEAQNLLGVLYSKGMGVPQNAKMACLWFEKAARQDEPGGQFGLARCYDTGDGGEQDFAK 1214
Query: 288 AVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
A + + AG A + ++ ++ +RD A
Sbjct: 1215 AAHWYTRSAEAGFPKAQYALGILYREGLGLARDDAQ 1250
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 167 GDPAGQFNLGISYL------------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
G P Q +L ++YL ++AV+ + +A+ + A + G V
Sbjct: 248 GWPQAQLSLAMAYLLRYSRQKDNPDEAKQAVQWVEEAAERNDLEATRLMGSLYQSGLAVG 307
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
++++AA WY RAAE G + + G G+ + ++A W+++AA H +A L
Sbjct: 308 VDMKKAAYWYRRAAEAGDAESQNLYGKMLTAGVGVAQNRKEAVLWLEKAAAQDHTEAGLL 367
Query: 275 HGLGLFTE----GEMMKAVVYLELATRAGETAADHV 306
G LF + + KA+ YL+ A G+ A ++
Sbjct: 368 LGALLFHDESGVADPEKAIPYLKSAAEKGDIQAQNM 403
>gi|299530229|ref|ZP_07043655.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
gi|298721886|gb|EFI62817.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
Length = 418
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK--EAAISLYRQ 162
GK +G+GV KN D AL A + GL+Y E KK EA ++ Q
Sbjct: 17 GKAHLYGKGVEKNADDALRWLHLAAEHNHAPSQYLLGLVYVLGAEGVKKDPEAGLTHIHQ 76
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ Q LG YL+ EAV+ L +A+ G AQ L +G +
Sbjct: 77 AANAGNLDAQNLLGTIYLKGEAVEKDAATGVAWLERAAQQGSATAQNSLGFVYRKGELLA 136
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+LQ + RWYL AA+ V A + + Y GEG+ +H +A KW+ AD G KAQL
Sbjct: 137 QDLQASFRWYLMAAQQADVLAQFTVAEMYYLGEGVEKNHAEAAKWLTPLADKGVQKAQL 195
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 163 AAVLGDPAGQFNLGI-SYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+A+ G+ Q+N+G+ YL + EA K A+ G+ +AQY L G GV
Sbjct: 294 SALKGNVLAQYNVGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGEGV 353
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+L +A +WY AAE A Y Y G G+ + +QAR+W++RAA+ GH A+
Sbjct: 354 GKSLAQALKWYRLAAEQQDAPAQYALGTLYRDGLGVKKNAKQAREWLQRAAEQGHAPAK 412
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMD 151
+ +++A +LL GK G+GV + +A+ A RGS A + G ++ E
Sbjct: 188 KGVQKAQLLL--GKICFEGQGVAPDYKRAVLLLHAVAIRGSGEAYYELGRLFEQGEGEYR 245
Query: 152 KKEAAISLYRQA---------------AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGH 196
++ AI+ Y QA + + +F + Y++ +++ G+
Sbjct: 246 NEKEAIAYYTQALKYQHAAAAQRLEQLSASSPKSAEFAQSMEYMEN------LNSALKGN 299
Query: 197 VRAQYQLALCLHRGRG-VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
V AQY + + + G+G N EAA+W+ AA GY +A YN Y GEG+ S Q
Sbjct: 300 VLAQYNVGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGEGVGKSLAQ 359
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEG 283
A KW + AA+ AQ G L+ +G
Sbjct: 360 ALKWYRLAAEQQDAPAQYALGT-LYRDG 386
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAA--ISLYRQAAVLGDPA 170
GV+K+ + L + A G+ A G +Y E +K+AA ++ +AA G
Sbjct: 61 EGVKKDPEAGLTHIHQAANAGNLDAQNLLGTIYLKGEAVEKDAATGVAWLERAAQQGSAT 120
Query: 171 GQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q +LG Y + E + QAS V AQ+ +A + G GV+ N EAA+
Sbjct: 121 AQNSLGFVYRKGELLAQDLQASFRWYLMAAQQADVLAQFTVAEMYYLGEGVEKNHAEAAK 180
Query: 223 WYLRAAEGGYVRA-MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
W A+ G +A + +C+ G+G+ +++A + A G G+A E G LF
Sbjct: 181 WLTPLADKGVQKAQLLLGKICFE-GQGVAPDYKRAVLLLHAVAIRGSGEAYYELGR-LFE 238
Query: 282 EGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
+GE +A+ Y A + AA L+QLSA+S A
Sbjct: 239 QGEGEYRNEKEAIAYYTQALKYQHAAAAQR----LEQLSASSPKSA 280
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGL 249
A+ G V AQY+L G+GV+ N +A RW AAE + + Y L Y G EG+
Sbjct: 4 AAKTGDVAAQYELGKAHLYGKGVEKNADDALRWLHLAAEHNHAPSQYLLGLVYVLGAEGV 63
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAAD 304
+ +AA+ G+ AQ G ++ +GE ++ V +LE A + G A
Sbjct: 64 KKDPEAGLTHIHQAANAGNLDAQNLLGT-IYLKGEAVEKDAATGVAWLERAAQQGSATAQ 122
Query: 305 H 305
+
Sbjct: 123 N 123
>gi|299772021|ref|YP_003734047.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
oleivorans DR1]
gi|298702109|gb|ADI92674.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
oleivorans DR1]
Length = 230
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDP 169
+GV KN ++A GS A G++Y+ E D K A + +AA G
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMLYYTGTGVEKDPKRA-FDYFTKAAAKGHA 112
Query: 170 AGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q+NLG+ Y + E Y +A+ G+ A+Y LA +G GV + ++A
Sbjct: 113 KAQYNLGVLYDRGEGTAQNYVQAFEWFSRAANQGYPPAEYNLAHLYKKGHGVSQSDEQAL 172
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+WY +AAE A YN + Y GEG P + + A+KW ++AAD G
Sbjct: 173 KWYTKAAEHNESDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAG 218
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA---- 163
G + G GV K+ +A D F K AA+G A + G++Y D+ E Y QA
Sbjct: 83 GMLYYTGTGVEKDPKRAFDYFTKAAAKGHAKAQYNLGVLY---DRGEGTAQNYVQAFEWF 139
Query: 164 ---AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
A G P ++NL G+S E+A+K +A+ AQY LA G G
Sbjct: 140 SRAANQGYPPAEYNLAHLYKKGHGVSQSDEQALKWYTKAAEHNESDAQYNLAQMYLNGEG 199
Query: 213 VDFNLQEAARWYLRAAEGGYVRA 235
NLQ A +W+ +AA+ G V A
Sbjct: 200 TPKNLQLAKKWFQQAADAGDVDA 222
>gi|384411621|ref|YP_005620986.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931995|gb|AEH62535.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 526
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----E 149
A + L +A + L G + G+G+ ++ +KA+ + K A +G+ A G Y+
Sbjct: 294 ADQELADAQLSL--GLAYDLGQGIAQDYEKAVFWYQKAADQGNVDAQFYLGSAYYFGQGV 351
Query: 150 MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQY 201
E + +++AA G+P QF LG +Y E V Y+ ++ G+ AQY
Sbjct: 352 AQDYEKTMFWWQKAAEQGNPKSQFGLGNAYYNGEGVARDYEKAVFWYQKAADQGYADAQY 411
Query: 202 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261
L ++G+G + +A W+ +AA+ G A Y L Y G G+ + +A W +
Sbjct: 412 NLGDAYYQGQGAAQDYGKAVFWWRKAADQGLAAAQYALGLAYYNGAGIAQDYGKAVFWYQ 471
Query: 262 RAADCGHGKAQLEHGL 277
+AA+ G+ AQL G+
Sbjct: 472 KAANKGYADAQLNLGV 487
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G+GV ++ +K + + K A +G+ + G Y+ + E A+ Y++A
Sbjct: 342 GSAYYFGQGVAQDYEKTMFWWQKAAEQGNPKSQFGLGNAYYNGEGVARDYEKAVFWYQKA 401
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+NLG +Y Q + Y +A+ G AQY L L + G G+
Sbjct: 402 ADQGYADAQYNLGDAYYQGQGAAQDYGKAVFWWRKAADQGLAAAQYALGLAYYNGAGIAQ 461
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ +A WY +AA GY A N + Y G+G+ AR W+++AAD G+
Sbjct: 462 DYGKAVFWYQKAANKGYADAQLNLGVAYLKGQGVVQDKGVARFWIQKAADKGN 514
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G G+ ++ KA+ + K A + A + GL Y ++ + E A+ Y++
Sbjct: 270 GNAYHDGAGIAQDYGKAVFWYQKAADQELADAQLSLGLAY-DLGQGIAQDYEKAVFWYQK 328
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ QF LG +Y + V Y+ A+ G+ ++Q+ L + G GV
Sbjct: 329 AADQGNVDAQFYLGSAYYFGQGVAQDYEKTMFWWQKAAEQGNPKSQFGLGNAYYNGEGVA 388
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AA+ GY A YN Y G+G + +A W ++AAD G AQ
Sbjct: 389 RDYEKAVFWYQKAADQGYADAQYNLGDAYYQGQGAAQDYGKAVFWWRKAADQGLAAAQYA 448
Query: 275 HGLGLFTEG----EMMKAVVYLELATRAG 299
GL + + KAV + + A G
Sbjct: 449 LGLAYYNGAGIAQDYGKAVFWYQKAANKG 477
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + G+G+ ++ +KA+ F K A + A GL+Y + K AI Y++A
Sbjct: 90 GVAYISGQGISQDYEKAVFWFDKAADQNDASAQYYLGLLYDQGAGVPKDKVKAIFWYQKA 149
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD A Q NLG +Y E+A +A+ G+V AQ+ L + G GV
Sbjct: 150 AEQGDAAAQSNLGNAYRDGMGVAQDYEKAAFWWQKAADQGNVDAQFYLGGAYYFGYGVAR 209
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 273
+ ++A W +AA+ G A Y Y G G+ + ++ W ++AAD G AQ
Sbjct: 210 DYEKAMFWSQKAADQGLAAAQYFLGNAYYNGAGVAQDYGKSVFWYQKAADQGLAAAQYFL 269
Query: 274 ------------EHGLGLF-----TEGEMMKAVVYLELATRAGE-TAADHVKNVILQQLS 315
++G +F + E+ A + L LA G+ A D+ K V Q +
Sbjct: 270 GNAYHDGAGIAQDYGKAVFWYQKAADQELADAQLSLGLAYDLGQGIAQDYEKAVFWYQKA 329
Query: 316 A 316
A
Sbjct: 330 A 330
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 16/214 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G G+ ++ +KA+ + K A + + A G+ Y E A+ + +A
Sbjct: 54 GLAYQKGAGIAQDYEKAVFWWQKAADQDNVSAQRKLGVAYISGQGISQDYEKAVFWFDKA 113
Query: 164 AVLGDPAGQFNLGISYLQ-----EEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDF 215
A D + Q+ LG+ Y Q ++ VK ++ +A+ G AQ L G GV
Sbjct: 114 ADQNDASAQYYLGLLYDQGAGVPKDKVKAIFWYQKAAEQGDAAAQSNLGNAYRDGMGVAQ 173
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++AA W+ +AA+ G V A + Y FG G+ + +A W ++AAD G AQ
Sbjct: 174 DYEKAAFWWQKAADQGNVDAQFYLGGAYYFGYGVARDYEKAMFWSQKAADQGLAAAQYFL 233
Query: 276 GLGLFTEG----EMMKAVVYLELATRAGETAADH 305
G + + K+V + + A G AA +
Sbjct: 234 GNAYYNGAGVAQDYGKSVFWYQKAADQGLAAAQY 267
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 98/230 (42%), Gaps = 18/230 (7%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE- 149
W D +A G + G GV K+ KA+ + K A +G A + G Y +
Sbjct: 109 WFDKAADQNDASAQYYLGLLYDQGAGVPKDKVKAIFWYQKAAEQGDAAAQSNLGNAYRDG 168
Query: 150 ----MDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHV 197
D ++AA +++AA G+ QF LG +Y E+A+ +A+ G
Sbjct: 169 MGVAQDYEKAAF-WWQKAADQGNVDAQFYLGGAYYFGYGVARDYEKAMFWSQKAADQGLA 227
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQY L + G GV + ++ WY +AA+ G A Y Y G G+ + +A
Sbjct: 228 AAQYFLGNAYYNGAGVAQDYGKSVFWYQKAADQGLAAAQYFLGNAYHDGAGIAQDYGKAV 287
Query: 258 KWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 303
W ++AAD AQL G LG + KAV + + A G A
Sbjct: 288 FWYQKAADQELADAQLSLGLAYDLGQGIAQDYEKAVFWYQKAADQGNVDA 337
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEAAISLYRQA 163
G ++ G GV ++ +KA + K A +G+ A G Y+ E A+ ++A
Sbjct: 162 GNAYRDGMGVAQDYEKAAFWWQKAADQGNVDAQFYLGGAYYFGYGVARDYEKAMFWSQKA 221
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A G A Q+ LG +Y V Y S+ G AQY L H G G+
Sbjct: 222 ADQGLAAAQYFLGNAYYNGAGVAQDYGKSVFWYQKAADQGLAAAQYFLGNAYHDGAGIAQ 281
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A WY +AA+ A + L Y G+G+ + +A W ++AAD G+ AQ
Sbjct: 282 DYGKAVFWYQKAADQELADAQLSLGLAYDLGQGIAQDYEKAVFWYQKAADQGNVDAQFYL 341
Query: 276 G 276
G
Sbjct: 342 G 342
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
++ + A I L ++A GD A QF LG++Y + E+AV +A+ +V AQ
Sbjct: 28 QVSRGSAIIELQKKAEA-GDAAAQFVLGLAYQKGAGIAQDYEKAVFWWQKAADQDNVSAQ 86
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+L + G+G+ + ++A W+ +AA+ A Y L Y G G+P +A W
Sbjct: 87 RKLGVAYISGQGISQDYEKAVFWFDKAADQNDASAQYYLGLLYDQGAGVPKDKVKAIFWY 146
Query: 261 KRAADCGHGKAQLEHG 276
++AA+ G AQ G
Sbjct: 147 QKAAEQGDAAAQSNLG 162
>gi|324504766|gb|ADY42054.1| Protein sel-1 1 [Ascaris suum]
Length = 716
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N++ A F A GST A G MY + A +++AA G+
Sbjct: 337 GRGVEQNMELASQYFSTAAEAGSTNAYAYLGKMYLDGTSATPQDNATAFQFFKKAADKGN 396
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ LG+ Y+ +A+KL A+ G V Q L ++G GV + + A
Sbjct: 397 PIGQSGLGVMYMYGKGVKQDYNKALKLFTLAAEQGWVDGQLNLGHMHYKGLGVKRDFKLA 456
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++ G++ A +N + ++ G G+P + A + K A+ G +L +
Sbjct: 457 IKYFQLASQSGHILAFFNLAQIHATGTGVPRNCHTAVELYKNVAERGRWSERLMEAYSSY 516
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVI 310
EG +A YL LA E A + +I
Sbjct: 517 REGRTDEAAFKYLFLAELGYEPAQTNFAYII 547
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 24/124 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G+GV+++ +KAL F A +G ++ G M+ Y+ V
Sbjct: 404 GVMYMYGKGVKQDYNKALKLFTLAAEQGWVDGQLNLGHMH------------YKGLGVKR 451
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
D F L I Y Q AS +GH+ A + LA G GV N A Y
Sbjct: 452 D----FKLAIKYFQ--------LASQSGHILAFFNLAQIHATGTGVPRNCHTAVELYKNV 499
Query: 228 AEGG 231
AE G
Sbjct: 500 AERG 503
>gi|323447117|gb|EGB03067.1| hypothetical protein AURANDRAFT_34508 [Aureococcus anophagefferens]
Length = 345
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 10/241 (4%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
K W A+ L ++R G ++ G GV+ + KA + A RG +A + G+
Sbjct: 76 KIWKRAV-ELGNVEAMVRLGYSYETGSGVKLDKKKAERLYRAAADRGHAVAQFNLGIRLH 134
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQ 200
+K E Y AA G + NLG Y + + ++ +A+ GH +A
Sbjct: 135 SEEKHEEGFRYYALAADQGYTNAENNLGCCYERGKGTEVDLGKARYWFERAAAKGHEKAT 194
Query: 201 YQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
LAL RG G+ + ++AA+ Y RA E G V AM +G G+ L ++A +
Sbjct: 195 QSLALAYRRGYFGLVQSDKKAAKIYRRAVELGNVDAMSRLGEMTEYGSGVKLDKKKAERL 254
Query: 260 MKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 319
+ AAD G AQ L +EG+ +A Y LA G+T + + T
Sbjct: 255 YRAAADRGCAIAQSSLAYLLHSEGKCEEAFRYFALAANQGDTITESCLGCCYRDGEGTEV 314
Query: 320 D 320
D
Sbjct: 315 D 315
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKL-------LYQASIA-GHVRAQYQ 202
DKK A I +++A LG+ LG SY VKL LY+A+ GH AQ+
Sbjct: 71 DKKAAKI--WKRAVELGNVEAMVRLGYSYETGSGVKLDKKKAERLYRAAADRGHAVAQFN 128
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L + LH + +E R+Y AA+ GY A N CY G+G + +AR W +R
Sbjct: 129 LGIRLH----SEEKHEEGFRYYALAADQGYTNAENNLGCCYERGKGTEVDLGKARYWFER 184
Query: 263 AADCGHGKA 271
AA GH KA
Sbjct: 185 AAAKGHEKA 193
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 21/169 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------WEMDKKEAAISLYRQA 163
++ G+G +L KA F + AA+G A L Y + DKK A I YR+A
Sbjct: 165 YERGKGTEVDLGKARYWFERAAAKGHEKATQSLALAYRRGYFGLVQSDKKAAKI--YRRA 222
Query: 164 AVLGD--------PAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
LG+ ++ G+ +++A +L A+ G AQ LA LH +
Sbjct: 223 VELGNVDAMSRLGEMTEYGSGVKLDKKKAERLYRAAADRGCAIAQSSLAYLLH----SEG 278
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+EA R++ AA G CY GEG + +AR W +RAA
Sbjct: 279 KCEEAFRYFALAANQGDTITESCLGCCYRDGEGTEVDLGKARYWFERAA 327
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++AA+ + RA E G V AM Y G G+ L ++A + + AAD GH AQ G+
Sbjct: 72 KKAAKIWKRAVELGNVEAMVRLGYSYETGSGVKLDKKKAERLYRAAADRGHAVAQFNLGI 131
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
L +E + + Y LA G T A++ ++ T D
Sbjct: 132 RLHSEEKHEEGFRYYALAADQGYTNAENNLGCCYERGKGTEVD 174
>gi|329123578|ref|ZP_08252140.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
gi|327470320|gb|EGF15780.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
Length = 189
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCL 207
A+ +R+AA G QF+LG Y EAVK +A+ G+ AQ L +
Sbjct: 18 AVKWFRKAAEQGHAEAQFSLGNMYSDGIGVKQDDFEAVKWYRKAADQGYAGAQMNLGVMY 77
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + +A +WY +A E GY A N YS G G+ + +A KW K+AA+ G
Sbjct: 78 ANGRGVKQDYFKAVKWYRKAVEQGYANAQANLGSAYSAGRGVRQDYTEAVKWFKKAAENG 137
Query: 268 HGKAQLEHGL 277
Q + GL
Sbjct: 138 SADGQFKLGL 147
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G+GV+++ +A+ F K A +G A G MY + D EA + YR+AA
Sbjct: 5 YAKGQGVKQDDFEAVKWFRKAAEQGHAEAQFSLGNMYSDGIGVKQDDFEA-VKWYRKAAD 63
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 217
G Q NLG+ Y VK Y +A G+ AQ L GRGV +
Sbjct: 64 QGYAGAQMNLGVMYANGRGVKQDYFKAVKWYRKAVEQGYANAQANLGSAYSAGRGVRQDY 123
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
EA +W+ +AAE G + L Y G+G+ A++W +A D G+
Sbjct: 124 TEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTFAKEWFGKACDNGN 174
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
EAVK +A+ GH AQ+ L G GV + EA +WY +AA+ GY A N +
Sbjct: 17 EAVKWFRKAAEQGHAEAQFSLGNMYSDGIGVKQDDFEAVKWYRKAADQGYAGAQMNLGVM 76
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
Y+ G G+ + +A KW ++A + G+ AQ G
Sbjct: 77 YANGRGVKQDYFKAVKWYRKAVEQGYANAQANLG 110
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ + +G+GV + EA +W+ +AAE G+ A ++ YS G G+ +A KW ++
Sbjct: 1 MGVIYAKGQGVKQDDFEAVKWFRKAAEQGHAEAQFSLGNMYSDGIGVKQDDFEAVKWYRK 60
Query: 263 AADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAG 299
AAD G+ AQ+ G+ ++ G + KAV + A G
Sbjct: 61 AADQGYAGAQMNLGV-MYANGRGVKQDYFKAVKWYRKAVEQG 101
>gi|440792477|gb|ELR13698.1| Sel1 repeatcontaining protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 130 KGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--- 182
K A++G A GLMY E E A++ +R+AA G+ Q +LG Y +
Sbjct: 202 KAASQGHREAQFSLGLMYKEGRSVAQSDELAVAWWRKAAHQGEFNAQSHLGYMYEKGRGV 261
Query: 183 ------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
EA +A+I GH AQY LA +GRGV N EAA WYL++A G A
Sbjct: 262 ERPSDVEAAAWYRRAAIQGHSSAQYNLAGLCRQGRGVAQNNSEAATWYLQSARQGLALAQ 321
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
++ G G+ S+ +A W +AA GH AQ E G
Sbjct: 322 FHLGCMCHDGVGVAQSYEEAVAWWSKAALQGHIGAQYELG 361
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 16/190 (8%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKK 153
REA L G +K GR V ++ + A+ + K A +G A G MY E
Sbjct: 209 REAQFSL--GLMYKEGRSVAQSDELAVAWWRKAAHQGEFNAQSHLGYMYEKGRGVERPSD 266
Query: 154 EAAISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLAL 205
A + YR+AA+ G + Q+NL G++ EA Q++ G AQ+ L
Sbjct: 267 VEAAAWYRRAAIQGHSSAQYNLAGLCRQGRGVAQNNSEAATWYLQSARQGLALAQFHLGC 326
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAA 264
H G GV + +EA W+ +AA G++ A Y Y G G+P AR+W+ AA
Sbjct: 327 MCHDGVGVAQSYEEAVAWWSKAALQGHIGAQYELGCLYKAGRAGVPQDIALARRWLSAAA 386
Query: 265 DCGHGKAQLE 274
G+ +AQ E
Sbjct: 387 SKGYPEAQAE 396
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 164 AVLGDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A GD Q+ L +Y++ E A +A+ GH AQ+ L G GV+
Sbjct: 99 ATEGDAVAQYRLAKAYMKGNHDVAQSAENAAGWADKAARQGHAGAQFLLGKMYAGGFGVE 158
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N E W+ +A G +A Y+ Y G+ + A + ++AA GH +AQ
Sbjct: 159 RNADEVLTWWAKAVRQGNKQAQYHLGRLYE-SVGVVTT---AAQLTEKAASQGHREAQFS 214
Query: 275 HGLGLFTEG 283
GL ++ EG
Sbjct: 215 LGL-MYKEG 222
>gi|374621834|ref|ZP_09694364.1| Sel1 domain-containing protein [Ectothiorhodospira sp. PHS-1]
gi|373940965|gb|EHQ51510.1| Sel1 domain-containing protein [Ectothiorhodospira sp. PHS-1]
Length = 220
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 14/159 (8%)
Query: 160 YRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
YR A LG G+FN+G Y + EAV+ A+ G + AQ LAL +GR
Sbjct: 15 YRMMAQLGHDTGRFNVGYMYARGQGVRQDDAEAVRWYRMAAENGDLNAQTNLALMYVQGR 74
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GVD + +A RWY +AAE G RA N + Y G G +A W + AAD + A
Sbjct: 75 GVDKDEVQALRWYRQAAEQGSTRAQCNMAYLYLHGIGTDADEARAAHWYRMAADLENPAA 134
Query: 272 QLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADH 305
Q + G+ L+ G ++++A ++ +LA G A+
Sbjct: 135 QSDLGV-LYANGRGVPRDLVQAYMWTQLAAFQGYAQAEE 172
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCL 207
A+ YR AA GD Q NL + Y+Q +A++ QA+ G RAQ +A
Sbjct: 47 AVRWYRMAAENGDLNAQTNLALMYVQGRGVDKDEVQALRWYRQAAEQGSTRAQCNMAYLY 106
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G D + AA WY AA+ A + + Y+ G G+P QA W + AA G
Sbjct: 107 LHGIGTDADEARAAHWYRMAADLENPAAQSDLGVLYANGRGVPRDLVQAYMWTQLAAFQG 166
Query: 268 HGKAQLEHGLGLF 280
+ AQ E LG +
Sbjct: 167 Y--AQAEENLGQY 177
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 55/132 (41%), Gaps = 32/132 (24%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVL 166
+ GRGV K+ +AL + + A +GST A + +Y D EA A YR AA L
Sbjct: 70 YVQGRGVDKDEVQALRWYRQAAEQGSTRAQCNMAYLYLHGIGTDADEARAAHWYRMAADL 129
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
+PA Q +LG+ Y GRGV +L +A W
Sbjct: 130 ENPAAQSDLGVLYAN----------------------------GRGVPRDLVQAYMWTQL 161
Query: 227 AAEGGYVRAMYN 238
AA GY +A N
Sbjct: 162 AAFQGYAQAEEN 173
>gi|312083937|ref|XP_003144069.1| Sel1l protein [Loa loa]
gi|307760767|gb|EFO20001.1| Sel1l protein [Loa loa]
Length = 709
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 14/211 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N+D A F A GST A G MY + A +++AA G+
Sbjct: 329 GRGVEQNMDLASQYFSTAAQAGSTNAYAYLGKMYLDGTSATPQDNATAFQFFKKAADKGN 388
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ L I Y+ +A KL A+ G V Q L RG GV + + A
Sbjct: 389 PVGQSGLAIMYMYGKGVKQDYTKAAKLFTLAAEQGWVDGQLNLGYLHFRGLGVKRDFKLA 448
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++ G+V A +N + ++ G G+P + A + K A+ G +L +
Sbjct: 449 IKYFQLASQSGHVNAYFNLAQIHATGTGVPRNCHTAVELYKNVAERGRWSERLMEAYASY 508
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVI 310
G + +A YL LA E A + +I
Sbjct: 509 RSGRVDEAAFKYLFLAELGYEPAQTNFAYII 539
>gi|347964156|ref|XP_310466.4| AGAP000615-PA [Anopheles gambiae str. PEST]
gi|333466863|gb|EAA06387.4| AGAP000615-PA [Anopheles gambiae str. PEST]
Length = 849
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ GRG+ + +AL F + A G+ +AM G +Y E E A +++AA
Sbjct: 388 YQGGRGIPLDHQRALQYFSQAANAGNAVAMAFLGKIYLEGSDNIKADNETAFKYFKKAAD 447
Query: 166 LGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG+P GQ LGI YL + V K +A+ G V Q QL + G GV +
Sbjct: 448 LGNPVGQSGLGIMYLHGKGVRKDTGKALKYFAKAADQGWVDGQLQLGNMYYSGIGVQRDF 507
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ A +++ A++ G+V A YN ++ G G+ S A + K A+ G
Sbjct: 508 KLAIKYFSLASQSGHVLAFYNLGQMHAIGLGMIRSCPTAVELFKNVAERG 557
>gi|213586863|ref|ZP_03368689.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 267
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 31 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 90
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 91 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 150
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA--- 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 151 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYT 210
Query: 265 -----DCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297
DC A+ G T ++ + +L R
Sbjct: 211 EKSKDDCSALIAERNRLKGTLTPDQLSETYAAFDLIRR 248
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q EAV YQ ++A G AQ L +
Sbjct: 54 ALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 113
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 114 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLKAAEQG 173
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVI 310
AQL G ++ G + +A ++ +A+ E + D +I
Sbjct: 174 FTPAQLALG-EIYAHGRQGVPKDNKQAYIWYYMASIYTEKSKDDCSALI 221
>gi|403052608|ref|ZP_10907092.1| hypothetical protein AberL1_13916 [Acinetobacter bereziniae LMG
1003]
Length = 282
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 159 LYRQAAVLGDPAGQFNLGISY-----LQE---EAVKLLYQASIAGHVRAQYQLALCLHRG 210
L+ AA LGD LG Y +QE +A + +A+ AG+ A+ + G
Sbjct: 117 LFEDAAALGDIPSLNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENNIGNMYLHG 176
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GV + +A++WY++AAE G V A YN L Y G+G+ + QA KW AA+ G
Sbjct: 177 HGVSQDKLKASQWYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYKWFLEAANQGDHN 236
Query: 271 AQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 305
AQ G GL + + ++ + E + ++G + A H
Sbjct: 237 AQYHLGKMYLDGLGVDKNLSNSISWFEKSAKSGNSYAAH 275
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAIS 158
L G +K G GV++N +A + +LK A G + A + G MY DK +A+
Sbjct: 130 LNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENNIGNMYLHGHGVSQDKLKAS-Q 188
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRG 210
Y +AA G+ Q+NLG+ Y + +K Y +A+ G AQY L G
Sbjct: 189 WYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYKWFLEAANQGDHNAQYHLGKMYLDG 248
Query: 211 RGVDFNLQEAARWYLRAAEGG 231
GVD NL + W+ ++A+ G
Sbjct: 249 LGVDKNLSNSISWFEKSAKSG 269
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCL 207
A Y+ +A G ++NL GI +A KL A+ G + + +L
Sbjct: 78 AFKWYKLSADKGYAKAKYNLAILLSSDSGIKNDYAQAKKLFEDAAALGDIPSLNELGNFY 137
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV N +A+ +YL+AA GY A N Y G G+ +A +W +AA+ G
Sbjct: 138 KDGIGVQENYAQASEYYLKAANAGYSAAENNIGNMYLHGHGVSQDKLKASQWYIKAAEQG 197
Query: 268 HGKAQLEHGLGLFTEGEMMKAVV------YLELATRAGETAADHVKNVILQQL 314
AQ GL F G+ +K +LE A + A H+ + L L
Sbjct: 198 EVDAQYNLGLMYFL-GDGIKQDYSQAYKWFLEAANQGDHNAQYHLGKMYLDGL 249
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 195 GHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
G AQY + + G + + N+ EA +WY +A+ GY +A YN ++ S G+ +
Sbjct: 52 GDPEAQYNMGVLFTDGYKDLKPNIIEAFKWYKLSADKGYAKAKYNLAILLSSDSGIKNDY 111
Query: 254 RQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA-DHVKN 308
QA+K + AA G + E G G+ + +A Y A AG +AA +++ N
Sbjct: 112 AQAKKLFEDAAALGDIPSLNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENNIGN 171
Query: 309 VILQ 312
+ L
Sbjct: 172 MYLH 175
>gi|194910259|ref|XP_001982100.1| GG12409 [Drosophila erecta]
gi|190656738|gb|EDV53970.1| GG12409 [Drosophila erecta]
Length = 824
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ +++ KAL+ F K A G+ + G +Y E + +AA + +A+
Sbjct: 348 YQGGKVTQQDHQKALEYFTKAATAGNAVGFAFLGKLYLEGSDQIKADNDAAFKYFSKASE 407
Query: 166 LGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+GDP GQ LG+ YL +A+ QA+ G V Q QL G GV +
Sbjct: 408 MGDPVGQSGLGLMYLNGLGVPRDSIKALSYFTQAADQGWVDGQLQLGNMYFTGNGVKTDY 467
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A +++ A + G+V A YN + ++G G+ S A ++ K ++ G ++L H
Sbjct: 468 KLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERGRWSSRLMHAY 527
Query: 278 GLFTEGEMMKAVVYLELATRAGETAA 303
+ + + +A + L G A
Sbjct: 528 SDYKDNRIDEAYMQYSLMAEVGYEVA 553
>gi|423012857|ref|ZP_17003578.1| Sel1 domain-containing protein [Achromobacter xylosoxidans AXX-A]
gi|338784186|gb|EGP48529.1| Sel1 domain-containing protein [Achromobacter xylosoxidans AXX-A]
Length = 264
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGR 211
+R A G Q+ LG+ Y V + L +A+ GH AQ L GR
Sbjct: 32 WRPLAEAGHAKAQYGLGLMYANGSGVPQDDLLASQWLRKAADQGHAPAQDALGTLYQLGR 91
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV + +AARWY RAAE G A YN + Y FG G+P AR+W ++AAD G+ +A
Sbjct: 92 GVPKDELQAARWYRRAAEQGLDTAQYNLARQYDFGRGVPRDLAAAREWYEKAADQGYPRA 151
Query: 272 Q 272
Q
Sbjct: 152 Q 152
>gi|407782908|ref|ZP_11130116.1| Putative TPR repeat protein [Oceanibaculum indicum P24]
gi|407204849|gb|EKE74829.1| Putative TPR repeat protein [Oceanibaculum indicum P24]
Length = 222
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALC 206
A+ Y A G+ QF LG+SY Q EAV+ +A+ G AQ +LAL
Sbjct: 30 AMRWYEAQARAGNARAQFLLGLSYEQGLRGAEPDAAEAVRWYRKAAEQGVPEAQAKLALA 89
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
L GRGV + EA RWY +AAE G A YN + G G P +A W ++AA
Sbjct: 90 LQFGRGVAADPAEARRWYGKAAEQGLAGAQYNLAYLLEAGLGGPRDTSRAIYWYEKAAVG 149
Query: 267 GHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
G +A G GL GE + +A +L LA+ AGE + + +++ R+
Sbjct: 150 GVSRALTALG-GLHARGEDGQQNLREAYKWLILASEAGEPGTADMLRQLAGEIATEDREA 208
Query: 322 AMLVVDSWRA 331
A WRA
Sbjct: 209 AESDARRWRA 218
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA++ + AG+ RAQ+ L L +G RG + + EA RWY +AAE G A +L
Sbjct: 29 EAMRWYEAQARAGNARAQFLLGLSYEQGLRGAEPDAAEAVRWYRKAAEQGVPEAQAKLAL 88
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLG 278
FG G+ +AR+W +AA+ G AQ LE GLG
Sbjct: 89 ALQFGRGVAADPAEARRWYGKAAEQGLAGAQYNLAYLLEAGLG 131
>gi|313683440|ref|YP_004061178.1| sel1 domain-containing protein repeat-containing protein
[Sulfuricurvum kujiense DSM 16994]
gi|313156300|gb|ADR34978.1| Sel1 domain protein repeat-containing protein [Sulfuricurvum
kujiense DSM 16994]
Length = 227
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQAAVLGDPAGQFNLGI 177
++A++ F A + + +A+ G M+ + E+++ LY QAA L +PA +NL +
Sbjct: 15 EEAIELFETLALQNNPIALSSLGYMHQKGLGIESSLERSFHLYTQAAELNEPAALYNLAL 74
Query: 178 SYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y Q ++ +LL +A++ +AQ+++AL L RG G N EAA WY AA+
Sbjct: 75 MYADGVVVPHDQFKSYELLLRAAVLEFPQAQFEVALALERGLGCVQNFSEAAFWYEEAAK 134
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEM 285
G A N + + G G+ H +A RAA+ +AQ GL GL E +
Sbjct: 135 RGNANAFNNLGVLFKEGHGVVQDHAKAFICFSRAANANLAEAQYNLGLMYDQGLGCEADH 194
Query: 286 MKAVVYLELATRAGETAADHVKNVI 310
A LE +A + K++I
Sbjct: 195 DTA---LEWCRKAAYNGHEKAKSII 216
>gi|404378836|ref|ZP_10983915.1| hypothetical protein HMPREF9021_01251 [Simonsiella muelleri ATCC
29453]
gi|294483337|gb|EFG31023.1| hypothetical protein HMPREF9021_01251 [Simonsiella muelleri ATCC
29453]
Length = 269
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 9/184 (4%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV+++ D A + K A +G V Y + ++ + A Y AA G
Sbjct: 45 GFMYQTGAGVKQDNDLAAKWYTKAAEQGDVDCQVILAEWYDDNEQYDLAAKWYAVAAEQG 104
Query: 168 DPAGQFNL------GISYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
D Q NL G+ + Q+ +A + A++ G A Y L + G D N ++
Sbjct: 105 DVDAQNNLARLYAEGLGFEQDYDKAEQYWQMAAVQGDDEALYNLGVIHDDALGRDPNYEK 164
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
AA +YL+AA G AM N + Y G G+P QA +W +AA+ G+ AQL G+
Sbjct: 165 AADFYLQAAHLGNADAMVNLGMLYQEGFGVPEDAAQANEWFLQAAELGNETAQLNLGIN- 223
Query: 280 FTEG 283
+ EG
Sbjct: 224 YAEG 227
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQ 200
+ DK E ++ AAV GD +NLG+ + E+A QA+ G+ A
Sbjct: 125 DYDKAE---QYWQMAAVQGDDEALYNLGVIHDDALGRDPNYEKAADFYLQAAHLGNADAM 181
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
L + G GV + +A W+L+AAE G A N + Y+ G G+ A KW
Sbjct: 182 VNLGMLYQEGFGVPEDAAQANEWFLQAAELGNETAQLNLGINYAEGLGVMQDFDLAEKWW 241
Query: 261 KRAADCGHGKAQ 272
AA G+ A+
Sbjct: 242 TIAAKQGNKDAE 253
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G QYQL G GV + AA+WY +AAE G V + Y E L
Sbjct: 36 GDADCQYQLGFMYQTGAGVKQDNDLAAKWYTKAAEQGDVDCQVILAEWYDDNEQYDL--- 92
Query: 255 QARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
A KW AA+ G AQ + GL E + KA Y ++A G+ A + VI
Sbjct: 93 -AAKWYAVAAEQGDVDAQNNLARLYAEGLGFEQDYDKAEQYWQMAAVQGDDEALYNLGVI 151
>gi|149908090|ref|ZP_01896758.1| hypothetical protein PE36_20520 [Moritella sp. PE36]
gi|149809096|gb|EDM69027.1| hypothetical protein PE36_20520 [Moritella sp. PE36]
Length = 291
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGIS 178
K +++F+ A G++ A + G MY + A+S YR++A G Q L
Sbjct: 28 KYIETFI-AAKHGNSQAQYNLGFMYANGSGFLKNNHKAVSWYRKSAEQGCAIAQSTLAYM 86
Query: 179 Y--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y +EA ++A+ AQ L++ GRGV N EA W +AAE
Sbjct: 87 YGSGKGTYQSDQEAAIWCHKAAEQNIALAQLMLSVMYVNGRGVAQNDNEAVLWCRKAAEQ 146
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGE 284
Y RA YN Y+ G+G+ S++ A W K+A++ G+ KAQ G+G+ E
Sbjct: 147 NYARAQYNLGFMYTKGKGVTQSYKIAVSWFKKASEQGYAKAQSNLGYMYSKGIGILKNDE 206
Query: 285 MMKAVVYLELATRAGETAADHVKNVI 310
+ A + A G A + +V+
Sbjct: 207 L--AAYWFRKAGEQGNAKAQYCLSVM 230
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAISLYR 161
G + +G G KN KA+ + K A +G +A MY ++ D +EAAI ++
Sbjct: 48 GFMYANGSGFLKNNHKAVSWYRKSAEQGCAIAQSTLAYMYGSGKGTYQSD-QEAAIWCHK 106
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA Q L + Y+ EAV +A+ + RAQY L +G+GV
Sbjct: 107 -AAEQNIALAQLMLSVMYVNGRGVAQNDNEAVLWCRKAAEQNYARAQYNLGFMYTKGKGV 165
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ + A W+ +A+E GY +A N YS G G+ + A W ++A + G+ KAQ
Sbjct: 166 TQSYKIAVSWFKKASEQGYAKAQSNLGYMYSKGIGILKNDELAAYWFRKAGEQGNAKAQ 224
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ +GRGV +N ++A+ K A + A + G MY
Sbjct: 123 YVNGRGVAQNDNEAVLWCRKAAEQNYARAQYNLGFMY---------------------TK 161
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
G+ G++ + AV +AS G+ +AQ L +G G+ N + AA W+ +A E
Sbjct: 162 GK---GVTQSYKIAVSWFKKASEQGYAKAQSNLGYMYSKGIGILKNDELAAYWFRKAGEQ 218
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
G +A Y S+ Y G G+P + A W+ A G+ A
Sbjct: 219 GNAKAQYCLSVMYYKGHGVPRCDKHAYAWVSLALINGYENAH 260
>gi|432465751|ref|ZP_19707842.1| hypothetical protein A15K_01689 [Escherichia coli KTE205]
gi|433072872|ref|ZP_20259538.1| hypothetical protein WIS_01828 [Escherichia coli KTE129]
gi|433120302|ref|ZP_20305981.1| hypothetical protein WKC_01726 [Escherichia coli KTE157]
gi|433183321|ref|ZP_20367587.1| hypothetical protein WGO_01760 [Escherichia coli KTE85]
gi|430994232|gb|ELD10563.1| hypothetical protein A15K_01689 [Escherichia coli KTE205]
gi|431589435|gb|ELI60650.1| hypothetical protein WIS_01828 [Escherichia coli KTE129]
gi|431644060|gb|ELJ11747.1| hypothetical protein WKC_01726 [Escherichia coli KTE157]
gi|431708211|gb|ELJ72735.1| hypothetical protein WGO_01760 [Escherichia coli KTE85]
Length = 647
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQ 272
+ +A RW+L++AE GY+ A Y+T+ YS E + +A W +AA G G A
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESISQDQEKALYWFTKAAKNGADGAGDAM 510
Query: 273 LEHGLGLFTEGE 284
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ Y + A+ G+ A Y L + G V +L+ A W+ RAA+ + A
Sbjct: 303 GLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDA 362
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+Y + YS G G + +ARKW AA G+ AQ E
Sbjct: 363 LYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYE 401
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLG-DPAGQ--FNLGISYLQE-------- 182
A +Y + +E A+ + +AA G D AG + LG YL
Sbjct: 469 HAQYHTARLYSGSESISQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 528
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA + L A+ G + A + LA + L+ + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLGSTEAQHQTAA 588
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|432484351|ref|ZP_19726274.1| hypothetical protein A15Y_00819 [Escherichia coli KTE212]
gi|432669559|ref|ZP_19905104.1| hypothetical protein A1Y7_01092 [Escherichia coli KTE119]
gi|433172485|ref|ZP_20357042.1| hypothetical protein WGQ_00745 [Escherichia coli KTE232]
gi|431018152|gb|ELD31589.1| hypothetical protein A15Y_00819 [Escherichia coli KTE212]
gi|431213292|gb|ELF11168.1| hypothetical protein A1Y7_01092 [Escherichia coli KTE119]
gi|431695986|gb|ELJ61184.1| hypothetical protein WGQ_00745 [Escherichia coli KTE232]
Length = 325
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G+++ + K+ ++A+ K A +G T A G W +D+ EA A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALG---WTLDRGEAPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GVD
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVD 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G+ + A +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVDQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDK-KEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + +D+ K A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVDQNKTLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE---MMKAV 289
A Y+ Y+ + + QA W+K+AA GH A G L GE +AV
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTL-DRGEAPNYKEAV 120
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
V+ ++A +G + A + + + + ++D A+
Sbjct: 121 VWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|432583903|ref|ZP_19820303.1| hypothetical protein A1SM_03124 [Escherichia coli KTE57]
gi|431116553|gb|ELE19996.1| hypothetical protein A1SM_03124 [Escherichia coli KTE57]
Length = 647
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ L IS EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +A RW+L++AE GY+ A Y+T+ YS E + +A W +AA G
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESISQDQEKALYWFTKAAKNG 502
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ Y + A+ G+ A Y L + G V +L+ A W+ RAA+ + A
Sbjct: 303 GLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDA 362
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+Y + YS G G + +ARKW AA G+ AQ E
Sbjct: 363 LYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYE 401
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLG-DPAGQ--FNLGISYLQE-------- 182
A +Y + +E A+ + +AA G D AG + LG YL
Sbjct: 469 HAQYHTARLYSGSESISQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 528
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA + L A+ G + A + LA + L+ + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLGSTEAQHQTAA 588
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|383934141|ref|ZP_09987583.1| hypothetical protein RNAN_0643 [Rheinheimera nanhaiensis E407-8]
gi|383704597|dbj|GAB57674.1| hypothetical protein RNAN_0643 [Rheinheimera nanhaiensis E407-8]
Length = 717
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 85/212 (40%), Gaps = 48/212 (22%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------------------WEMDKKEA 155
G+GV KN ++A D + + AA+G T A + G+ Y DK++
Sbjct: 358 GQGVSKNENRAFDLYNRAAAQGVTEAQRELGISYSLGRGVRANDSKAVEFLQLACDKQDL 417
Query: 156 AI----------------------SLYRQAAVLGDPAGQFNLGISYLQEEAVKL------ 187
A L ++AA G+ QF LG+ Q + V +
Sbjct: 418 AACYHLALHILEGRGIKADAVRGAQLLQRAANEGNSEAQFRLGVMLSQGQGVAVDETAAF 477
Query: 188 --LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
L +A+ GH AQY L L G G N EA +WY AAE G + A YN Y
Sbjct: 478 GWLLKAAEQGHAEAQYLTGLRLANGTGTAQNDAEAVKWYRAAAEQGVLYAQYNLGFMYGA 537
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
G G+ QA W + A+ G AQ GL
Sbjct: 538 GRGVAQDDEQALYWYTKVAEQGDADAQFNLGL 569
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 133 ARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY------LQEEAVK 186
A G +A DA +YW Y++AA Q+NLG Y Q+EA
Sbjct: 248 ANGKGVAQDDALAVYW-----------YQKAAAQQHVLAQYNLGFMYANGRGVTQDEASA 296
Query: 187 LLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
LL+ +A+ G V AQY +A GRG ++ +A WY RA E G+ RA + + Y
Sbjct: 297 LLWYERAANQGDVDAQYIVAGRYQTGRGAPVDINKAIGWYQRALEQGHSRAGFQLAQFYL 356
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGE 300
G+G+ + +A RAA G +AQ E G LG KAV +L+LA +
Sbjct: 357 TGQGVSKNENRAFDLYNRAAAQGVTEAQRELGISYSLGRGVRANDSKAVEFLQLACDKQD 416
Query: 301 TAA 303
AA
Sbjct: 417 LAA 419
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 12/182 (6%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAV 165
R++ GRG +++KA+ + + +G + A Y + K E A LY +AA
Sbjct: 318 RYQTGRGAPVDINKAIGWYQRALEQGHSRAGFQLAQFYLTGQGVSKNENRAFDLYNRAAA 377
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G Q LGISY +AV+ L A + A Y LAL + GRG+ +
Sbjct: 378 QGVTEAQRELGISYSLGRGVRANDSKAVEFLQLACDKQDLAACYHLALHILEGRGIKADA 437
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
A+ RAA G A + + S G+G+ + A W+ +AA+ GH +AQ GL
Sbjct: 438 VRGAQLLQRAANEGNSEAQFRLGVMLSQGQGVAVDETAAFGWLLKAAEQGHAEAQYLTGL 497
Query: 278 GL 279
L
Sbjct: 498 RL 499
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 79/188 (42%), Gaps = 17/188 (9%)
Query: 81 LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
+R A L+ ++ N+ + R G G+GV + A LK A +G A
Sbjct: 438 VRGAQLLQRAANEG-----NSEAQFRLGVMLSQGQGVAVDETAAFGWLLKAAEQGHAEAQ 492
Query: 141 VDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISY------LQEEAVKLLYQ 190
GL A+ YR AA G Q+NLG Y Q++ L +
Sbjct: 493 YLTGLRLANGTGTAQNDAEAVKWYRAAAEQGVLYAQYNLGFMYGAGRGVAQDDEQALYWY 552
Query: 191 ASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
+A G AQ+ L L GRGV + Q+A WY +AA ++RA+ + Y G G
Sbjct: 553 TKVAEQGDADAQFNLGLRYETGRGVRQDDQQAVAWYQKAAGQNHLRAIAHLGYMYEKGYG 612
Query: 249 LPLSHRQA 256
+ L ++A
Sbjct: 613 VSLDEKRA 620
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 12/171 (7%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGD 168
GRG++ + + + A G++ A G+M + + AA +AA G
Sbjct: 429 EGRGIKADAVRGAQLLQRAANEGNSEAQFRLGVMLSQGQGVAVDETAAFGWLLKAAEQGH 488
Query: 169 PAGQF--------NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
Q+ G + EAVK A+ G + AQY L GRGV + ++A
Sbjct: 489 AEAQYLTGLRLANGTGTAQNDAEAVKWYRAAAEQGVLYAQYNLGFMYGAGRGVAQDDEQA 548
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WY + AE G A +N L Y G G+ +QA W ++AA H +A
Sbjct: 549 LYWYTKVAEQGDADAQFNLGLRYETGRGVRQDDQQAVAWYQKAAGQNHLRA 599
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 12/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G R +G G +N +A+ + A +G A + G MY E A+ Y +
Sbjct: 496 GLRLANGTGTAQNDAEAVKWYRAAAEQGVLYAQYNLGFMYGAGRGVAQDDEQALYWYTKV 555
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD QFNLG+ Y ++AV +A+ H+RA L +G GV
Sbjct: 556 AEQGDADAQFNLGLRYETGRGVRQDDQQAVAWYQKAAGQNHLRAIAHLGYMYEKGYGVSL 615
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ + A Y ++ RA+ L Y G + ++A + +AA+ G+ AQ
Sbjct: 616 DEKRALALYQQSLPAKVPRALTALGLFYKNGRLVKADDKRAVELFAQAAEQGYANAQYNL 675
Query: 276 G 276
G
Sbjct: 676 G 676
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +AQYQLAL G+GV + A WY +AA +V A YN Y+ G G+
Sbjct: 235 GLAQAQYQLALAHANGKGVAQDDALAVYWYQKAAAQQHVLAQYNLGFMYANGRGVTQDEA 294
Query: 255 QARKWMKRAADCGHGKAQ 272
A W +RAA+ G AQ
Sbjct: 295 SALLWYERAANQGDVDAQ 312
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 92/217 (42%), Gaps = 20/217 (9%)
Query: 78 LPQLRAASLVCKSWNDA-----LRPLREAMVLL---RWGKRFKHGRGVRKNLDKALDSFL 129
L LR A+ + NDA R E VL G + GRGV ++ ++AL +
Sbjct: 494 LTGLRLANGTGTAQNDAEAVKWYRAAAEQGVLYAQYNLGFMYGAGRGVAQDDEQALYWYT 553
Query: 130 KGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISY------ 179
K A +G A + GL Y + A++ Y++AA +LG Y
Sbjct: 554 KVAEQGDADAQFNLGLRYETGRGVRQDDQQAVAWYQKAAGQNHLRAIAHLGYMYEKGYGV 613
Query: 180 -LQEEAVKLLYQASIAGHV-RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
L E+ LYQ S+ V RA L L GR V + + A + +AAE GY A Y
Sbjct: 614 SLDEKRALALYQQSLPAKVPRALTALGLFYKNGRLVKADDKRAVELFAQAAEQGYANAQY 673
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N Y +G G+ +AR + AA+ AQ +
Sbjct: 674 NLGWMYEYGRGVAKDLVKARDLYQLAAEQSEPLAQAQ 710
>gi|429743994|ref|ZP_19277518.1| Sel1 repeat protein [Neisseria sp. oral taxon 020 str. F0370]
gi|429164032|gb|EKY06198.1| Sel1 repeat protein [Neisseria sp. oral taxon 020 str. F0370]
Length = 591
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 55/247 (22%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + G+GV+++ +A+ + K AA+G A+ + Y+ +DK E I + Q
Sbjct: 254 GTIYAQGKGVKQDWKQAVQWYEKAAAQGHVRALGALSIRYFSGEGVDKDEKRGIDMLTQV 313
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRA---------------- 199
A GD Q LG YL +EEAVK L +A+ G+ RA
Sbjct: 314 AERGDTLAQTVLGGRYLTGSGVKQDKEEAVKWLTRAAEKGNARAARLLSTTYRDGFVVEK 373
Query: 200 --------------------QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
QY LAL +G+GV ++ +A +WY +AAE G A YN
Sbjct: 374 DDGKAVYWLEKAAQLGQAQAQYDLALRYRQGKGVPKDMAQAVKWYRKAAEQGRADAQYNL 433
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-EHGLG-LFTEGEMM-----KAVVYL 292
++ Y G+G+ QA +W+++AA + L +H LG ++ G ++ +A +L
Sbjct: 434 AVAYRAGDGVAKDDAQAVEWLRKAAAQETSFSVLAQHELGFMYLRGSILPKDAKQAAYWL 493
Query: 293 ELATRAG 299
+ A+R G
Sbjct: 494 DKASRHG 500
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 95/232 (40%), Gaps = 56/232 (24%)
Query: 94 ALRPLREA-----MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
AL PL EA LL GK + GRGV K+ KAL K A GS M + G+MY+
Sbjct: 56 ALLPLAEAGDAEAQALL--GKAYYLGRGVEKDEQKALFWDKKAAENGSLRGMNNLGVMYY 113
Query: 149 E----------------------------------------MDKKEAAISL-YRQAAVLG 167
E + + EA +L YR+AA G
Sbjct: 114 EGRGGLAKDLAEGTKWIRRAAEKGYAVSQRNIGLAYEEGKGVARDEAQAALWYRKAAEQG 173
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
D Q LG Y ++A +A+ G+ AQ L GRGV N E
Sbjct: 174 DALSQSALGTLYFDGRGVAQDDKQAFAWYEKAAKQGNAAAQNNLGFMYGAGRGVAQNPAE 233
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+ +WY +AA A YN Y+ G+G+ +QA +W ++AA GH +A
Sbjct: 234 SLKWYKKAAAQNDATAQYNIGTIYAQGKGVKQDWKQAVQWYEKAAAQGHVRA 285
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + GRGV ++ +A + K A +G+ A + G MY ++ Y++A
Sbjct: 182 GTLYFDGRGVAQDDKQAFAWYEKAAKQGNAAAQNNLGFMYGAGRGVAQNPAESLKWYKKA 241
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A D Q+N+G Y Q ++AV+ +A+ GHVRA L++ G GVD
Sbjct: 242 AAQNDATAQYNIGTIYAQGKGVKQDWKQAVQWYEKAAAQGHVRALGALSIRYFSGEGVDK 301
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA---- 271
+ + + AE G A Y G G+ +A KW+ RAA+ G+ +A
Sbjct: 302 DEKRGIDMLTQVAERGDTLAQTVLGGRYLTGSGVKQDKEEAVKWLTRAAEKGNARAARLL 361
Query: 272 QLEHGLGLFTEGEMMKAVVYLE 293
+ G E + KAV +LE
Sbjct: 362 STTYRDGFVVEKDDGKAVYWLE 383
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E AVK L + AG AQ L + GRGV+ + Q+A W +AAE G +R M N +
Sbjct: 51 EAAVKALLPLAEAGDAEAQALLGKAYYLGRGVEKDEQKALFWDKKAAENGSLRGMNNLGV 110
Query: 242 CYSFGE-GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
Y G GL + KW++RAA+ G+ +Q GL + EG+
Sbjct: 111 MYYEGRGGLAKDLAEGTKWIRRAAEKGYAVSQRNIGLA-YEEGK 153
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQAS---IAGHVRAQYQLA 204
A+ YR+AA G Q+NL ++Y +AV+ L +A+ + V AQ++L
Sbjct: 414 AVKWYRKAAEQGRADAQYNLAVAYRAGDGVAKDDAQAVEWLRKAAAQETSFSVLAQHELG 473
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
RG + + ++AA W +A+ GYVRA + GEG+ +A + ++ AA
Sbjct: 474 FMYLRGSILPKDAKQAAYWLDKASRHGYVRAKKKLAAMSVAGEGVEKDDAKAAELLRDAA 533
Query: 265 DCGHGKAQLEHGL----GLFT-EGEMMKAVVYLELATRAGETAAD-HVKNV 309
+ G ++L GL G T ++ +A +L A+ G + AD ++K++
Sbjct: 534 EAGDADSRLILGLAYKNGFLTLPKDLQQAEYWLRKASEQGRSEADPYLKDI 584
>gi|189502299|ref|YP_001958016.1| hypothetical protein Aasi_0921 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497740|gb|ACE06287.1| hypothetical protein Aasi_0921 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1281
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK +++G GV KN ++ F K A G + G +Y + + + A YR+AA
Sbjct: 978 GKLYQNGEGVEKNEEEVAKFFKKAAKIGHPGGEYELGRVYEDKKQYKEAHKYYRRAANHN 1037
Query: 168 DPAGQFNLGISYLQ--------------------------EEAVKLLYQASIAGHVRAQY 201
+ QF+L Y + +E VKL +A+ GH A Y
Sbjct: 1038 NADAQFSLAQMYRENLVKVEGRESEKEKGKEKKEDENFSLKEVVKLYQEAAKQGHAEAAY 1097
Query: 202 QLALCLHRGRG-VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR-QARKW 259
+L G V N +A +WY +A+GG +A Y+ Y G GL QA W
Sbjct: 1098 ELGQVYETELGEVKQNYGKARKWYQVSAQGGNAKAQYSLGRIYQNGCGLRRKDEVQASIW 1157
Query: 260 MKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
K AA GH +AQ E G + +A + E+A A
Sbjct: 1158 YKAAAKQGHREAQFELGRMYENTKDYAEARKWYEMAADQNHVGA 1201
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLYRQAAVLGDPA 170
V++N KA + A G+ A G +Y D+ +A+I Y+ AA G
Sbjct: 1110 VKQNYGKARKWYQVSAQGGNAKAQYSLGRIYQNGCGLRRKDEVQASI-WYKAAAKQGHRE 1168
Query: 171 GQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
QF LG Y EA K A+ HV AQ+ LA G+G D N A R Y
Sbjct: 1169 AQFELGRMYENTKDYAEARKWYEMAADQNHVGAQFNLAGMYRDGKGGDKNEDTAVRLYKA 1228
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
AA+ Y A Y G+G+ +A ++ ++ A+
Sbjct: 1229 AAKQEYADANIQLGWMYDHGKGVEKDPSKALEYYRKEAE 1267
Score = 44.3 bits (103), Expect = 0.084, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A++L QA GH A Y+L G GV+ N +E A+++ +AA+ G+ Y Y
Sbjct: 958 AIELYQQADERGHAGAAYELGKLYQNGEGVEKNEEEVAKFFKKAAKIGHPGGEYELGRVY 1017
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +++A K+ +RAA+ + AQ
Sbjct: 1018 EDKK----QYKEAHKYYRRAANHNNADAQF 1043
>gi|418532479|ref|ZP_13098382.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
gi|371450338|gb|EHN63387.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
Length = 437
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK--EAAISLYRQ 162
GK + +G GV KN D A+ A + GL+Y E KK EA ++ Q
Sbjct: 36 GKAYLYGNGVEKNADDAMRWLRLAAEHNHAPSQYLLGLVYVLGAEGVKKDPEAGLAYIHQ 95
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ Q LG YL+ EAV+ L +A+ G AQ L +G V
Sbjct: 96 AANAGNLDAQNLLGTIYLKGEAVEKDAARGVAWLERAAQRGSAAAQNGLGFVYRKGELVA 155
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ Q + RWYL+AA+ V A + + Y GEG+ +H +A KW+ AD G KAQL
Sbjct: 156 QDQQASFRWYLKAAQQADVLAQFTVAEMYYLGEGVEKNHAEAAKWLAPLADKGVQKAQL 214
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 163 AAVLGDPAGQFNLGI-SYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+A+ G+ Q+N+G+ YL + EA K A+ G+ +AQY L G GV
Sbjct: 313 SALKGNVLAQYNVGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGEGV 372
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+L +A +WY AAE A Y Y G G+ + +QAR+W++RAA+ G+ A+
Sbjct: 373 GKSLVQALKWYRLAAEQQDAPAQYALGTLYRDGLGVKKNAKQAREWLQRAAEQGYAPAK 431
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMD 151
+ +++A +LL GK G+GV + +A+ A RGS A + G ++ E
Sbjct: 207 KGVQKAQLLL--GKICFEGQGVDPDYKRAVLLLHAVAIRGSGEAYYELGRLFEQGEGEYR 264
Query: 152 KKEAAISLYRQA---------------AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGH 196
++ AI+ Y QA + + +F + Y++ +++ G+
Sbjct: 265 NEKEAIAYYTQALKYQHAAAAQRLEQLSASSPKSAEFAQSMEYMEN------LNSALKGN 318
Query: 197 VRAQYQLALCLHRGRG-VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
V AQY + + + G+G N EAA+W+ AA GY +A YN Y GEG+ S Q
Sbjct: 319 VLAQYNVGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGEGVGKSLVQ 378
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEG 283
A KW + AA+ AQ G L+ +G
Sbjct: 379 ALKWYRLAAEQQDAPAQYALGT-LYRDG 405
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 7/137 (5%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGL 249
A+ G V AQY+L G GV+ N +A RW AAE + + Y L Y G EG+
Sbjct: 23 AAKTGDVGAQYELGKAYLYGNGVEKNADDAMRWLRLAAEHNHAPSQYLLGLVYVLGAEGV 82
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 304
++ +AA+ G+ AQ G ++ +GE + + V +LE A + G AA
Sbjct: 83 KKDPEAGLAYIHQAANAGNLDAQNLLGT-IYLKGEAVEKDAARGVAWLERAAQRGSAAAQ 141
Query: 305 HVKNVILQQLSATSRDR 321
+ + ++ ++D+
Sbjct: 142 NGLGFVYRKGELVAQDQ 158
>gi|444921845|ref|ZP_21241674.1| Putative protein YbeQ [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507051|gb|ELV07234.1| Putative protein YbeQ [Wohlfahrtiimonas chitiniclastica SH04]
Length = 258
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 14/193 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEA 155
A LR G + G GVR++ +A + A +G+ +A G Y D EA
Sbjct: 31 AEAQLRLGAAYSSGEGVRQDDAEAAKWYRLSADQGNDIAQWRLGAAYSFGEGVRQDYAEA 90
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCL 207
+ +R +A G+ Q+ LG++Y + V+ Y +I G+ AQ++L +
Sbjct: 91 -VKWFRLSADQGNDEAQWRLGVAYGSGKGVRQDYAEAIKWFRLSADQGNDEAQWRLGVAY 149
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GV + EA +W+ +A+ G A + + Y GEG+ + +A KW + +AD G
Sbjct: 150 GSGKGVRQDYAEAVKWFRLSADQGNDEAQWRLGVAYFLGEGVRQDYAEAVKWFRLSADQG 209
Query: 268 HGKAQLEHGLGLF 280
+ +AQL+ G+ F
Sbjct: 210 NAEAQLKLGVAYF 222
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAA 156
+ R G + G GVR++ +A+ F A +G+ A G+ Y D EA
Sbjct: 68 IAQWRLGAAYSFGEGVRQDYAEAVKWFRLSADQGNDEAQWRLGVAYGSGKGVRQDYAEA- 126
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLH 208
I +R +A G+ Q+ LG++Y EAVK ++ G+ AQ++L +
Sbjct: 127 IKWFRLSADQGNDEAQWRLGVAYGSGKGVRQDYAEAVKWFRLSADQGNDEAQWRLGVAYF 186
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GV + EA +W+ +A+ G A + Y GEG+ + +A++W ++ D G+
Sbjct: 187 LGEGVRQDYAEAVKWFRLSADQGNAEAQLKLGVAYFLGEGVRQDYAEAKEWFGKSCDNGN 246
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
++ L + + G+ AQ +L G GV + EAA+WY +A+ G A + YS
Sbjct: 19 IQELIKKADQGNAEAQLRLGAAYSSGEGVRQDDAEAAKWYRLSADQGNDIAQWRLGAAYS 78
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATRAGE 300
FGEG+ + +A KW + +AD G+ +AQ + +G G + +A+ + L+ G
Sbjct: 79 FGEGVRQDYAEAVKWFRLSADQGNDEAQWRLGVAYGSGKGVRQDYAEAIKWFRLSADQGN 138
Query: 301 TAA 303
A
Sbjct: 139 DEA 141
>gi|384411622|ref|YP_005620987.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931996|gb|AEH62536.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 197
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E+AV +A+ G +QY L GRGV + ++AA WY +AA+ +++A YN L
Sbjct: 63 EKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAFWYRKAADQNFIQAQYNLGL 122
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
Y G+GLP S A W ++AAD G+ AQL G +
Sbjct: 123 LYVKGQGLPKSDEHAAFWWQKAADQGYADAQLNLGKAYY 161
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 8/127 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLAL 205
E A+ Y++AA G Q+NLG +YL V + Y+ A+ ++AQY L L
Sbjct: 63 EKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAFWYRKAADQNFIQAQYNLGL 122
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+G+G+ + + AA W+ +AA+ GY A N Y G+G+ AR W+++AAD
Sbjct: 123 LYVKGQGLPKSDEHAAFWWQKAADQGYADAQLNLGKAYYLGQGVVQDKGIARFWIQQAAD 182
Query: 266 CGHGKAQ 272
G+ KA+
Sbjct: 183 KGNAKAK 189
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
AG+ A+ L GRG + ++A WY +AA+ G + YN Y G G+ + +
Sbjct: 39 AGNRLAEEVLGEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDY 98
Query: 254 RQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+A W ++AAD +AQ GL L+ +G+
Sbjct: 99 EKAAFWYRKAADQNFIQAQYNLGL-LYVKGQ 128
>gi|221235062|ref|YP_002517498.1| polar development protein podJ [Caulobacter crescentus NA1000]
gi|29429226|sp|Q9ZG88.2|PODJ_CAUCR RecName: Full=Localization factor PodJL; AltName: Full=Polar
organelle development protein; Contains: RecName:
Full=Localization factor PodJS
gi|251764811|sp|B8GXA0.1|PODJ_CAUCN RecName: Full=Localization factor PodJL; AltName: Full=Polar
organelle development protein; Contains: RecName:
Full=Localization factor PodJS
gi|24110907|tpg|DAA00313.1| TPA_exp: polar organelle development protein [Caulobacter
vibrioides]
gi|220964234|gb|ACL95590.1| polar development protein podJ [Caulobacter crescentus NA1000]
Length = 974
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 12/150 (8%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
V+LL +A+ G+ AQ+ L+ G+ GV ++ EA RW RAA GG RAM+N +L Y
Sbjct: 745 VELLKRAANGGYPAAQFYLSKMYEGGKNGVKVDMAEARRWSERAANGGDPRAMHNLALYY 804
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATR 297
GEG P + A W ++AAD G +Q E GLG+ +A + +A R
Sbjct: 805 FKGEGGPRNSTTAASWFRKAADMGLVDSQFNLAQLYESGLGVSQ--NPAEAYKWYVIAGR 862
Query: 298 AGETAADHVKNVILQQLSATSR---DRAML 324
AG++ A + QL+A ++ DR+ L
Sbjct: 863 AGDSTARGRATALRSQLTAEAQQTADRSAL 892
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 157 ISLYRQAAVLGDPAGQFNL---------GISYLQEEAVKLLYQASIAGHVRAQYQLALCL 207
+ L ++AA G PA QF L G+ EA + +A+ G RA + LAL
Sbjct: 745 VELLKRAANGGYPAAQFYLSKMYEGGKNGVKVDMAEARRWSERAANGGDPRAMHNLALYY 804
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G G N AA W+ +AA+ G V + +N + Y G G+ + +A KW A G
Sbjct: 805 FKGEGGPRNSTTAASWFRKAADMGLVDSQFNLAQLYESGLGVSQNPAEAYKWYVIAGRAG 864
Query: 268 HGKAQ 272
A+
Sbjct: 865 DSTAR 869
>gi|313652038|ref|YP_004046716.1| Sel1 domain protein repeat-containing protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940789|gb|ADR19980.1| Sel1 domain protein repeat-containing protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 246
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 18/195 (9%)
Query: 89 KSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD 142
K + +A + + +A G + +G+GVR++ KA++ + K G L +
Sbjct: 36 KKYKEAFQKFKKACDGGDAKGCFILGVMYDNGQGVRQDYSKAVEFYQKACDGGEALGCFN 95
Query: 143 AGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQ 190
G MY+ A+ Y++A GD G +NLG+ Y + + AV+ +
Sbjct: 96 LGFMYYNGQGVGQDYSKAVEFYQKACDGGDAWGCYNLGVQYEKGQGVGQDNFKAVEFYQK 155
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A G+ L + +G+GV + +AA +Y +A +GG + YN + Y G+G+
Sbjct: 156 ACDGGYALGCNNLGVMYAKGQGVGQDYFKAAEFYQKACDGGEAKGCYNLGVMYYEGQGVR 215
Query: 251 LSHRQARKWMKRAAD 265
+ +A++ +A D
Sbjct: 216 QDYFRAKELFGKACD 230
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 14/195 (7%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI----- 193
+V+ GL + K + A +++A GD G F LG+ Y + V+ Y ++
Sbjct: 24 GLVEDGLKLLDQKKYKEAFQKFKKACDGGDAKGCFILGVMYDNGQGVRQDYSKAVEFYQK 83
Query: 194 ---AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
G + L + G+GV + +A +Y +A +GG YN + Y G+G+
Sbjct: 84 ACDGGEALGCFNLGFMYYNGQGVGQDYSKAVEFYQKACDGGDAWGCYNLGVQYEKGQGVG 143
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADH 305
+ +A ++ ++A D G+ G+ ++ +G + KA + + A GE +
Sbjct: 144 QDNFKAVEFYQKACDGGYALGCNNLGV-MYAKGQGVGQDYFKAAEFYQKACDGGEAKGCY 202
Query: 306 VKNVILQQLSATSRD 320
V+ + +D
Sbjct: 203 NLGVMYYEGQGVRQD 217
>gi|260753301|ref|YP_003226194.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552664|gb|ACV75610.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 233
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E+AV +A+ G +QY L GRGV + ++AA WY +AA+ +++A YN L
Sbjct: 63 EKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAFWYRKAADQNFIQAQYNLGL 122
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELAT 296
Y G+GLP S A W ++AA+ G KAQ G+ + G + +A+ ++E A
Sbjct: 123 LYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLGV-FYHNGRAVPKNDARAIFWMEQAA 181
Query: 297 RAG 299
G
Sbjct: 182 HQG 184
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + HGRG ++ +KA+ + K A +G + + G Y +D ++AA YR+
Sbjct: 49 GEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAF-WYRK 107
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA Q+NLG+ Y++ E A +A+ G +AQ+ L + H GR V
Sbjct: 108 AADQNFIQAQYNLGLLYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLGVFYHNGRAVP 167
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
N A W +AA G V A ++ Y+ G+G P +A W ++AAD G+
Sbjct: 168 KNDARAIFWMEQAAHQGLVEAQMLLAMAYASGQGAPKDKEKAVFWYQKAADQGN 221
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLAL 205
E A+ Y++AA G Q+NLG +YL V + Y+ A+ ++AQY L L
Sbjct: 63 EKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAFWYRKAADQNFIQAQYNLGL 122
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+G+G+ + + AA W+ +AAE G +A +N + Y G +P + +A WM++AA
Sbjct: 123 LYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLGVFYHNGRAVPKNDARAIFWMEQAAH 182
Query: 266 CGHGKAQL 273
G +AQ+
Sbjct: 183 QGLVEAQM 190
>gi|294054544|ref|YP_003548202.1| Sel1 domain-containing protein repeat-containing protein
[Coraliomargarita akajimensis DSM 45221]
gi|293613877|gb|ADE54032.1| Sel1 domain protein repeat-containing protein [Coraliomargarita
akajimensis DSM 45221]
Length = 1129
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+R G +++G G + KA FL A G+ LA MY
Sbjct: 760 IRLGLMYRYGYGPAVDRSKAEALFLPAAKNGNALAQYSLAWMY----------------- 802
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
PA + N Y E+A + QA+ GH +AQ + G+G++ + +AA+WY
Sbjct: 803 --NSPADE-NSTPDY--EQANEWFLQAAENGHTKAQLEYGYHCESGKGMEVDYVKAAKWY 857
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
L AAE G A N L Y++ G+P ++A KW +AA + KA
Sbjct: 858 LAAAEQGNAIAQTNLGLAYTYARGVPEDAKEATKWFLKAAKQNNAKA 904
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISL 159
L W + ++A + FL+ A G T A ++ G E+D +AA
Sbjct: 798 LAWMYNSPADENSTPDYEQANEWFLQAAENGHTKAQLEYGYHCESGKGMEVDYVKAA-KW 856
Query: 160 YRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
Y AA G+ Q NLG++Y +EA K +A+ + +A Y L G
Sbjct: 857 YLAAAEQGNAIAQTNLGLAYTYARGVPEDAKEATKWFLKAAKQNNAKALYYLGWNYQLGD 916
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
G++ + + A Y +AA+GGY A C+ +G G+ + QA
Sbjct: 917 GIEQDGRAALDAYQQAADGGYAWAQVMLGRCHEYGIGVKADYTQA 961
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AA 156
A+ G + + RGV ++ +A FLK A + + A+ G Y D E AA
Sbjct: 866 AIAQTNLGLAYTYARGVPEDAKEATKWFLKAAKQNNAKALYYLGWNYQLGDGIEQDGRAA 925
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAVKL-------LYQASIAGHVR--AQYQLALCL 207
+ Y+QAA G Q LG + VK Y A++ G A LA
Sbjct: 926 LDAYQQAADGGYAWAQVMLGRCHEYGIGVKADYTQAFDHYSAALEGKASNWATLHLARMH 985
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
RG G N ++A Y +E Y + + + CY+ G G + A + ++RA
Sbjct: 986 ERGLGTPPNAEQAFTHYQTLSENDYGSGIAHLARCYADGIGTTVDQDLALQTIQRA 1041
>gi|393908256|gb|EJD74976.1| Sel1l protein, variant [Loa loa]
Length = 649
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 14/211 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N+D A F A GST A G MY + A +++AA G+
Sbjct: 269 GRGVEQNMDLASQYFSTAAQAGSTNAYAYLGKMYLDGTSATPQDNATAFQFFKKAADKGN 328
Query: 169 PAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ L I Y+ +A KL A+ G V Q L RG GV + + A
Sbjct: 329 PVGQSGLAIMYMYGKGVKQDYTKAAKLFTLAAEQGWVDGQLNLGYLHFRGLGVKRDFKLA 388
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++ G+V A +N + ++ G G+P + A + K A+ G +L +
Sbjct: 389 IKYFQLASQSGHVNAYFNLAQIHATGTGVPRNCHTAVELYKNVAERGRWSERLMEAYASY 448
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVI 310
G + +A YL LA E A + +I
Sbjct: 449 RSGRVDEAAFKYLFLAELGYEPAQTNFAYII 479
>gi|254561474|ref|YP_003068569.1| hypothetical protein METDI3061 [Methylobacterium extorquens DM4]
gi|254268752|emb|CAX24713.1| conserved hypothetical protein; putative signal peptide
[Methylobacterium extorquens DM4]
Length = 464
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 87 VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM 146
K W + A + G ++ G+GV K+ A + KGA G+ AM + G++
Sbjct: 213 AAKGWFEKATSAGSAEAMNDLGLLYEEGQGVAKDDAAAKGWYEKGAEAGNPFAMTNLGVL 272
Query: 147 YWEMD--KKEAAIS--LYRQAAVLGDPAGQFNLGISYLQEEAV-------KLLY-QASIA 194
Y K++ A + Y +AA +P G LG+ Y V KL Y +A+ A
Sbjct: 273 YENGQGVKQDYATAKLWYEKAAAADNPDGMRGLGLLYGNGRGVTQDYATAKLWYDKAANA 332
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G A L + G+GV + A WY +AA G ++MYN Y G+G+ +
Sbjct: 333 GSAFAMNDLGILYDNGQGVKQDYATAKLWYEKAAAEGNAQSMYNLGALYENGQGVKKDYG 392
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 303
A+ W ++AAD G + G L+ EG + A ++ E A G+T A
Sbjct: 393 SAKLWYEKAADAGSPEGMSALGT-LYAEGWGVTRDRSAAKLWYEKAAALGDTGA 445
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
LG++ A +A+ AG A L L G+GV + A WY + AE G
Sbjct: 204 GLGVTQDYAAAKGWFEKATSAGSAEAMNDLGLLYEEGQGVAKDDAAAKGWYEKGAEAGNP 263
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
AM N + Y G+G+ + A+ W ++AA
Sbjct: 264 FAMTNLGVLYENGQGVKQDYATAKLWYEKAA 294
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEAAIS--LYRQAAVL 166
+ +GRGV ++ A + K A GS AM D G++Y + K++ A + Y +AA
Sbjct: 309 YGNGRGVTQDYATAKLWYDKAANAGSAFAMNDLGILYDNGQGVKQDYATAKLWYEKAAAE 368
Query: 167 GDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ +NLG Y + VK Y +A+ AG L G GV +
Sbjct: 369 GNAQSMYNLGALYENGQGVKKDYGSAKLWYEKAADAGSPEGMSALGTLYAEGWGVTRDRS 428
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
A WY +AA G AM + + G G + R
Sbjct: 429 AAKLWYEKAAALGDTGAMQKIATLFEKGTGKAGAKR 464
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
++L L G+GV + A WY +AA G +MYN + FG G+ + A++W
Sbjct: 51 HKLGLLYEEGQGVAQDYAAARGWYEKAAAKGLAESMYNLGILDEFGRGVAQDYPAAKRW 109
>gi|188025893|ref|ZP_02960184.2| hypothetical protein PROSTU_02101 [Providencia stuartii ATCC 25827]
gi|188020880|gb|EDU58920.1| Sel1 repeat protein [Providencia stuartii ATCC 25827]
Length = 353
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
+ A + ++A LG Q +LG+ YL + A+K L AS G + AQ+ LAL
Sbjct: 215 QQAYQYFSRSAQLGFSPAQNSLGMLYLHGQGVKKEVKSAIKWLTLASEQGEISAQFNLAL 274
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
RG GV + +A W++RAA+ G A Y T CY +G G+ R+A W K AA
Sbjct: 275 IYARGDGVPADQAKACHWFIRAAQHGNNDAQYATGACYQYGMGVKQDDRKALYWYKLAAS 334
Query: 266 CGHGKAQ 272
G+ +A+
Sbjct: 335 QGNERAE 341
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
+LL +++ G AQ+ LA+ L + L EAA+WY +A+ G+ +A N +L Y
Sbjct: 41 QLLLKSAQDGQAEAQFNLAMLLQSEK----QLTEAAKWYRLSAQQGFTKAQINLALLYQQ 96
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQL 273
G G+ S Q WMK+AA+ G QL
Sbjct: 97 GNGVDKSPEQMLFWMKKAAEAGDPLGQL 124
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
++A + +++ G AQ L + G+GV ++ A +W A+E G + A +N +L
Sbjct: 215 QQAYQYFSRSAQLGFSPAQNSLGMLYLHGQGVKKEVKSAIKWLTLASEQGEISAQFNLAL 274
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATR 297
Y+ G+G+P +A W RAA G+ AQ G G+ + + KA+ + +LA
Sbjct: 275 IYARGDGVPADQAKACHWFIRAAQHGNNDAQYATGACYQYGMGVKQDDRKALYWYKLAAS 334
Query: 298 AGETAADHVKNVILQ 312
G A+ K +IL+
Sbjct: 335 QGNERAEK-KVLILE 348
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 167 GDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
G QFNL + E EA K ++ G +AQ LAL +G GVD + ++
Sbjct: 50 GQAEAQFNLAMLLQSEKQLTEAAKWYRLSAQQGFTKAQINLALLYQQGNGVDKSPEQMLF 109
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFG--EGLPLSHRQARKWMKRAADCGHGKAQL------E 274
W +AAE G N + G + LP + +QA W+ +AA A+L E
Sbjct: 110 WMKKAAEAGDPLGQLNMAEYTLSGVDKLLPKNKQQAEAWLVKAAAQHFQPAELMLAYWYE 169
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETA 302
G+ + TE +Y LA + A
Sbjct: 170 KGIAV-TEAPQKAQQIYQSLAKQNNPQA 196
>gi|384222371|ref|YP_005613537.1| hypothetical protein BJ6T_87070 [Bradyrhizobium japonicum USDA 6]
gi|354961270|dbj|BAL13949.1| hypothetical protein BJ6T_87070 [Bradyrhizobium japonicum USDA 6]
Length = 1085
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 12/187 (6%)
Query: 159 LYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRG 210
+ R AA+ GD + +G+ + + +EA K +A+ AG V A ++L +G
Sbjct: 859 VLRTAAMKGDATAAYEIGVRFAEGKGVAANYDEAAKWYDRAAQAGVVPATFRLGTLYEKG 918
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GV + A R+Y +AAE G +AM+N ++ + G G +++ A +W ++AAD G
Sbjct: 919 LGVKRDADIARRYYTQAAERGNAKAMHNLAVLDADGGGRGANYKSAAQWFRKAADRGVAD 978
Query: 271 AQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 326
+Q G+ G+ E + ++ + LA G+ A ++ + ++L S A L +
Sbjct: 979 SQFNLGILYARGIGVEQNLAESYKWFTLAAAQGDADASGKRDDVAKRLDPQSLAAAKLAI 1038
Query: 327 DSWRAMP 333
++ A P
Sbjct: 1039 QTFSAEP 1045
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A G RF G+GV N D+A + + A G A G +Y
Sbjct: 868 DATAAYEIGVRFAEGKGVAANYDEAAKWYDRAAQAGVVPATFRLGTLY------------ 915
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+ LG+ + A + QA+ G+ +A + LA+ G G N +
Sbjct: 916 ------------EKGLGVKRDADIARRYYTQAAERGNAKAMHNLAVLDADGGGRGANYKS 963
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
AA+W+ +AA+ G + +N + Y+ G G+ + ++ KW AA G A
Sbjct: 964 AAQWFRKAADRGVADSQFNLGILYARGIGVEQNLAESYKWFTLAAAQGDADA 1015
>gi|283856195|ref|YP_161870.2| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|283775191|gb|AAV88759.2| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 233
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E+AV +A+ G +QY L GRGV + ++AA WY +AA+ +++A YN L
Sbjct: 63 EKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAFWYRKAADQNFIQAQYNLGL 122
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELAT 296
Y G+GLP S A W ++AA+ G KAQ G+ + G + +A+ ++E A
Sbjct: 123 LYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLGV-FYHNGRAVPKNDARAIFWMEQAA 181
Query: 297 RAG 299
G
Sbjct: 182 HQG 184
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + HGRG ++ +KA+ + K A +G + + G Y +D ++AA YR+
Sbjct: 49 GEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAF-WYRK 107
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA Q+NLG+ Y++ E A +A+ G +AQ+ L + H GR V
Sbjct: 108 AADQNFIQAQYNLGLLYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLGVFYHNGRAVP 167
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
N A W +AA G V A ++ Y+ G+G P +A W ++AAD G+
Sbjct: 168 KNDARAIFWMEQAAHQGLVEAQMLLAMAYASGQGAPKDKEKAVYWYQKAADQGN 221
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLAL 205
E A+ Y++AA G Q+NLG +YL V + Y+ A+ ++AQY L L
Sbjct: 63 EKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAFWYRKAADQNFIQAQYNLGL 122
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+G+G+ + + AA W+ +AAE G +A +N + Y G +P + +A WM++AA
Sbjct: 123 LYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLGVFYHNGRAVPKNDARAIFWMEQAAH 182
Query: 266 CGHGKAQL 273
G +AQ+
Sbjct: 183 QGLVEAQM 190
>gi|303281979|ref|XP_003060281.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457752|gb|EEH55050.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 200
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 11/165 (6%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNL 175
GV KN + A +GA G+ A D G+++++ + E A + ++A G P + NL
Sbjct: 38 GVEKNDELARHWLERGAELGNFHAQCDLGVIHYDAGEYEVAREWFEKSAAQGHPIAEANL 97
Query: 176 GISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ Y + +AV+ L +A+ G AQ L L + +EA +W ++
Sbjct: 98 GVYYEKGHGVERNIPKAVEFLLRAAKKGCGDAQNNYGLLLSKEM---HEHEEAMKWLEKS 154
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A GY AM N Y G+G+P + +AR+W ++AA+ GH A+
Sbjct: 155 AAQGYAEAMCNIGTLYHDGKGVPRNLLKAREWWQKAAERGHEGAK 199
>gi|206563106|ref|YP_002233869.1| hypothetical protein BCAM1255 [Burkholderia cenocepacia J2315]
gi|444359438|ref|ZP_21160750.1| Sel1 repeat protein [Burkholderia cenocepacia BC7]
gi|444368150|ref|ZP_21168012.1| Sel1 repeat protein [Burkholderia cenocepacia K56-2Valvano]
gi|198039146|emb|CAR55110.1| putative exported protein [Burkholderia cenocepacia J2315]
gi|443601427|gb|ELT69569.1| Sel1 repeat protein [Burkholderia cenocepacia K56-2Valvano]
gi|443602049|gb|ELT70156.1| Sel1 repeat protein [Burkholderia cenocepacia BC7]
Length = 356
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQAAVLGDPAGQFNLGISY----- 179
++ A RG D LMY D E A YR+AA GD A Q NLG Y
Sbjct: 45 MEKAKRGDLDGEFDVALMYEHGDGVEQNPAEAAKWYRRAADQGDAASQNNLGTLYETGVG 104
Query: 180 ---LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+ EAV +A+ GH A L G G + EA R Y RAAE G R
Sbjct: 105 VEQSRAEAVNWYRRAAAQGHGNALCNLGRAYEHGEGAPQDSAEAVRLYRRAAEQGLPRGQ 164
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
L Y G G+P +A KW +RAAD G +AQ G L+ G +K
Sbjct: 165 LYLGLMYDAGTGVPQDAAEAAKWYRRAADQGDPQAQNALGY-LYDSGRGVK 214
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 16/185 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
++HG GV +N +A + + A +G + + G +Y E + EA ++ YR+AA
Sbjct: 63 YEHGDGVEQNPAEAAKWYRRAADQGDAASQNNLGTLYETGVGVEQSRAEA-VNWYRRAAA 121
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G NLG +Y EAV+L +A+ G R Q L L G GV +
Sbjct: 122 QGHGNALCNLGRAYEHGEGAPQDSAEAVRLYRRAAEQGLPRGQLYLGLMYDAGTGVPQDA 181
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
EAA+WY RAA+ G +A Y G G+ S A W + AA+ G+ AQ + L
Sbjct: 182 AEAAKWYRRAADQGDPQAQNALGYLYDSGRGVKQSDIDAFNWYRLAAEQGYANAQ--NNL 239
Query: 278 GLFTE 282
GL E
Sbjct: 240 GLMYE 244
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G GV ++ +A++ + + AA+G A+ + G Y D EA + LYR+
Sbjct: 96 GTLYETGVGVEQSRAEAVNWYRRAAAQGHGNALCNLGRAYEHGEGAPQDSAEA-VRLYRR 154
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G P GQ LG+ Y EA K +A+ G +AQ L GRGV
Sbjct: 155 AAEQGLPRGQLYLGLMYDAGTGVPQDAAEAAKWYRRAADQGDPQAQNALGYLYDSGRGVK 214
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A WY AAE GY A N L Y G+G+ +A KW + AA G +
Sbjct: 215 QSDIDAFNWYRLAAEQGYANAQNNLGLMYESGQGVRQDDVEAVKWYRLAAAQGVATSLFR 274
Query: 275 HGLGLFTEG 283
G+ ++ G
Sbjct: 275 LGVQYYSGG 283
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 20/162 (12%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAI 157
L G+ ++HG G ++ +A+ + + A +G + GLMY D EAA
Sbjct: 127 ALCNLGRAYEHGEGAPQDSAEAVRLYRRAAEQGLPRGQLYLGLMYDAGTGVPQDAAEAA- 185
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI-----------AGHVRAQYQLALC 206
YR+AA GDP Q LG Y VK Q+ I G+ AQ L L
Sbjct: 186 KWYRRAADQGDPQAQNALGYLYDSGRGVK---QSDIDAFNWYRLAAEQGYANAQNNLGLM 242
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
G+GV + EA +WY AA G +++ + Y G G
Sbjct: 243 YESGQGVRQDDVEAVKWYRLAAAQGVATSLFRLGVQYYSGGG 284
>gi|357405672|ref|YP_004917596.1| beta-lactamase [Methylomicrobium alcaliphilum 20Z]
gi|351718337|emb|CCE24006.1| putative Beta-lactamase [Methylomicrobium alcaliphilum 20Z]
Length = 385
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 113/250 (45%), Gaps = 38/250 (15%)
Query: 46 RFSCSRSIKSTEGHDFASL-P-FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMV 103
RF+C + G++ SL P F + ++ F+ Q L + + A PL
Sbjct: 66 RFNCDATATVINGNESESLRPLFSMRQQLKQDFSTFQ----ELADQDYGKAYFPL----- 116
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE--------- 154
+ + G+G+ +N +KA + +++ A T A W MD E
Sbjct: 117 ----ARMYLGGQGIPRNAEKA-EYYMRMAFNWCTSHQALADPEIW-MDLAEMYGNGFGIE 170
Query: 155 ----AAISLYRQAAVLGDPAGQFNLG--ISY---LQEEAVKLLY---QASIAGHVRAQYQ 202
++S R+AA G Q+NLG I Y ++++A++ ++ +A+ G+ AQ
Sbjct: 171 QNPVQSLSWCRKAAEAGLAGAQYNLGLKIEYGLGVKQDAIQAVFWYRKAADQGYAGAQCN 230
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
L L G GV+ N +AA WY RAAE GY A Y FG G+ QA W ++
Sbjct: 231 LGLNYECGYGVEQNTVQAAFWYRRAAEQGYAYAQIELGALYEFGVGVARDGEQAAFWYRK 290
Query: 263 AADCGHGKAQ 272
AA+ GH AQ
Sbjct: 291 AAEQGHPYAQ 300
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + ++G GV+++ +A+ + K A +G A + GL Y E + +AA YR+
Sbjct: 196 GLKIEYGLGVKQDAIQAVFWYRKAADQGYAGAQCNLGLNYECGYGVEQNTVQAAF-WYRR 254
Query: 163 AAVLGDPAGQ--------FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q F +G++ E+A +A+ GH AQ L G GV
Sbjct: 255 AAEQGYAYAQIELGALYEFGVGVARDGEQAAFWYRKAAEQGHPYAQDFLGELYWAGFGVA 314
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ ++A WY +AA+ G RA Y G + +QA W ++ A GH K Q
Sbjct: 315 QDYEKAVFWYRQAADQGAPRAQDMLHRVYPNGPAVETVDQQALYWYRKIAGRGHVKTQ 372
>gi|291002059|ref|XP_002683596.1| predicted protein [Naegleria gruberi]
gi|284097225|gb|EFC50852.1| predicted protein [Naegleria gruberi]
Length = 335
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 24/158 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G F+ G+GV+++ KA + +LK A +G T A G +YR+ A
Sbjct: 105 GAFFEEGKGVQQDYVKAFEWYLKAAEKGDTDAQFVIG-------------CIYRKGA--- 148
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ +A + +A+ G+ RAQ + +C G GV+ + +A WY +A
Sbjct: 149 --------GVEQDDVKAFEWYLRAAEKGYARAQLNIGVCFDDGIGVEQDDVKAFEWYFKA 200
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
AE G +N CY GEG+ + + A W+ + +
Sbjct: 201 AEKGCKDGQFNLGCCYKKGEGVEMDLKLALYWLSKVVN 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 162 QAAVLGDPAGQFNLGISY-----LQEEAVKLL---YQASIAGHVRAQYQLALCLHRGRGV 213
+AA GD QFN+G + +Q++ VK +A+ G AQ+ + +G GV
Sbjct: 91 KAAEKGDTTAQFNVGAFFEEGKGVQQDYVKAFEWYLKAAEKGDTDAQFVIGCIYRKGAGV 150
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ + +A WYLRAAE GY RA N +C+ G G+ +A +W +AA+ G Q
Sbjct: 151 EQDDVKAFEWYLRAAEKGYARAQLNIGVCFDDGIGVEQDDVKAFEWYFKAAEKGCKDGQF 210
Query: 274 EHGLGLFTEGE 284
G + +GE
Sbjct: 211 NLGC-CYKKGE 220
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
LC +R V RW L+AAE G A +N + G+G+ + +A +W +AA
Sbjct: 71 LCWYRYYAVCL-FTCVERWTLKAAEKGDTTAQFNVGAFFEEGKGVQQDYVKAFEWYLKAA 129
Query: 265 DCGHGKAQLEHG 276
+ G AQ G
Sbjct: 130 EKGDTDAQFVIG 141
>gi|451981484|ref|ZP_21929837.1| hypothetical protein, contains Sel1-like TPR repeats [Nitrospina
gracilis 3/211]
gi|451761272|emb|CCQ91099.1| hypothetical protein, contains Sel1-like TPR repeats [Nitrospina
gracilis 3/211]
Length = 220
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCL 207
+I+ + A G+ QF+LG SY +EEA K +++ G AQ+ + +C
Sbjct: 24 SIAELKNMAGEGNVLAQFDLGQSYRLGYGVEPNKEEAFKWYLKSAEGGLPDAQHHVGVCY 83
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G GV+ + Q+A WYL++AE GY A L Y G G+P ++A KW K+ +
Sbjct: 84 AKGFGVERDYQKAREWYLKSAENGYPLAFSKLGLVYLKGLGVPKDPQEAAKWYKQGVEKN 143
Query: 268 HGKAQLEHG-LGLFTEGEMMKAVVYLELATRA----GET----AADHVKNVILQQLSATS 318
+ L +G + + EG V +L TRA G+T A + + ++ ++S
Sbjct: 144 VQSSLLTYGVMHMNGEGVERDYVKAYDLLTRARRHGGDTDLARGARIMLDKLISKMSEEE 203
Query: 319 RDRAML-VVDSWRAMP 333
+DRA + + SW P
Sbjct: 204 KDRAGVSPIPSWIFDP 219
>gi|16760126|ref|NP_455743.1| hypothetical protein STY1292 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142103|ref|NP_805445.1| hypothetical protein t1669 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213428334|ref|ZP_03361084.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213650214|ref|ZP_03380267.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|378959834|ref|YP_005217320.1| hypothetical protein STBHUCCB_17740 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|25512257|pir||AD0649 probable secreted protein STY1292 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502420|emb|CAD08375.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137732|gb|AAO69294.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|374353706|gb|AEZ45467.1| Tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 509
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q EAV YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A QFN G+ Y L++ + L + +A+ G AQ + + +G V
Sbjct: 270 TAQRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGL 277
G+
Sbjct: 390 LGV 392
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 90/240 (37%), Gaps = 29/240 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G GV + ++A W G Y + L + + P ++ W ++ A
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPG--HIPLNALYDKAHPADQVHSQTWYRKTA 271
Query: 265 DCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVILQQLSATSRD 320
K Q G+ + ++K A+ + A G A V+ Q A S+D
Sbjct: 272 QRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQD 331
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|213163323|ref|ZP_03349033.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 481
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q EAV YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A QFN G+ Y L++ + L + +A+ G AQ + + +G V
Sbjct: 270 TAQRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGL 277
G+
Sbjct: 390 LGV 392
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 90/240 (37%), Gaps = 29/240 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G GV + ++A W G Y + L + + P ++ W ++ A
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPG--HIPLNALYDKAHPADQVHSQTWYRKTA 271
Query: 265 DCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVILQQLSATSRD 320
K Q G+ + ++K A+ + A G A V+ Q A S+D
Sbjct: 272 QRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQD 331
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|196228876|ref|ZP_03127742.1| Sel1 domain protein repeat-containing protein [Chthoniobacter
flavus Ellin428]
gi|196227157|gb|EDY21661.1| Sel1 domain protein repeat-containing protein [Chthoniobacter
flavus Ellin428]
Length = 645
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 130 KGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGISY------ 179
K AA G+ A GL Y++ + K A A+ LY+QAA G Q NLG+ Y
Sbjct: 65 KDAAAGNVKAQATLGLCYYQGYGVKKDLAKAVELYQQAAKAGHAGAQNNLGLMYEYGTGL 124
Query: 180 -LQEEAVKLLYQASIAGHVR-AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
+ LY A+ +R A+Y L + +G V + EA WY +AA G+ A+
Sbjct: 125 PVDHAKAHELYVAAAKQKLRDAEYNLGVEYDQGISVPQSWTEARSWYEKAAAQGHTAALT 184
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297
N Y G G+P++ A+K+++ AD G+ AQ F + + YL A
Sbjct: 185 NLGNLYLNGHGVPVNLETAKKYLQTPADVGNPTAQYNLATCYFLQHNATEGTTYLRRAAE 244
Query: 298 AGETAA 303
G + A
Sbjct: 245 GGSSNA 250
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G GV+K+L KA++ + + A G A + GLMY +D +A LY AA
Sbjct: 82 YYQGYGVKKDLAKAVELYQQAAKAGHAGAQNNLGLMYEYGTGLPVDHAKAH-ELYVAAAK 140
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
++NLG+ Y Q EA +A+ GH A L G GV NL
Sbjct: 141 QKLRDAEYNLGVEYDQGISVPQSWTEARSWYEKAAAQGHTAALTNLGNLYLNGHGVPVNL 200
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A ++ A+ G A YN + CY L + + +++RAA+ G AQLE G
Sbjct: 201 ETAKKYLQTPADVGNPTAQYNLATCYF----LQHNATEGTTYLRRAAEGGSSNAQLEWGR 256
Query: 278 GLFTEG----EMMKAVVYLELA 295
L+ ++ KA+ + LA
Sbjct: 257 YLYNSAPPRRDVTKAIYWTRLA 278
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L + + AG+V+AQ L LC ++G GV +L +A Y +AA+ G+ A N L Y +G
Sbjct: 63 LEKDAAAGNVKAQATLGLCYYQGYGVKKDLAKAVELYQQAAKAGHAGAQNNLGLMYEYGT 122
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
GLP+ H +A + AA A+ +E+ G+ +A + E A G TAA
Sbjct: 123 GLPVDHAKAHELYVAAAKQKLRDAEYNLGVEYDQGISVPQSWTEARSWYEKAAAQGHTAA 182
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 163 AAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G P G+F LG+ Y+ V K A+ VRA LA G V
Sbjct: 320 SAQTGYPDGEFALGLCYVNGTGVASDRAAGFKWFQAAAAQKQVRAAAMLAYFYEDGGTVP 379
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261
+ +EA +W AAEGG +A ++ CY G G+ + ++A KW +
Sbjct: 380 RDYKEAVKWLRIAAEGGEHQAQFHLGRCYRDGTGVDIDQKEALKWFR 426
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ ++ L LC G GV + +W+ AA VRA + Y G +P ++
Sbjct: 324 GYPDGEFALGLCYVNGTGVASDRAAGFKWFQAAAAQKQVRAAAMLAYFYEDGGTVPRDYK 383
Query: 255 QARKWMKRAADCGHGKAQLEHG 276
+A KW++ AA+ G +AQ G
Sbjct: 384 EAVKWLRIAAEGGEHQAQFHLG 405
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
+EAVK L A+ G +AQ+ L C G GVD + +EA +W+ + +G
Sbjct: 383 KEAVKWLRIAAEGGEHQAQFHLGRCYRDGTGVDIDQKEALKWFRLSVQG 431
>gi|418845155|ref|ZP_13399941.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418858817|ref|ZP_13413428.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418863324|ref|ZP_13417862.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392813964|gb|EJA69928.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392831685|gb|EJA87314.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392833192|gb|EJA88807.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGAVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+GE PLS ++A +W ++AA+ G Q
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQ 126
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGAVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|213612595|ref|ZP_03370421.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 482
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q EAV YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A QFN G+ Y L++ + L + +A+ G AQ + + +G V
Sbjct: 270 TAQRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGL 277
G+
Sbjct: 390 LGV 392
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 90/240 (37%), Gaps = 29/240 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G GV + ++A W G Y + L + + P ++ W ++ A
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPG--HIPLNALYDKAHPADQVHSQTWYRKTA 271
Query: 265 DCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVILQQLSATSRD 320
K Q G+ + ++K A+ + A G A V+ Q A S+D
Sbjct: 272 QRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQD 331
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|213419506|ref|ZP_03352572.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q EAV YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A QFN G+ Y L++ + L + +A+ G AQ + + +G V
Sbjct: 270 TAQRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGL 277
G+
Sbjct: 390 LGV 392
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 90/240 (37%), Gaps = 29/240 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G GV + ++A W G Y + L + + P ++ W ++ A
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPG--HIPLNALYDKAHPADQVHSQTWYRKTA 271
Query: 265 DCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVILQQLSATSRD 320
K Q G+ + ++K A+ + A G A V+ Q A S+D
Sbjct: 272 QRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQD 331
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|149277936|ref|ZP_01884075.1| hypothetical protein PBAL39_24640 [Pedobacter sp. BAL39]
gi|149231134|gb|EDM36514.1| hypothetical protein PBAL39_24640 [Pedobacter sp. BAL39]
Length = 828
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G G+ N +A + +GA +G TLA AG + E
Sbjct: 679 GLCYEYGIGIEPNAAEAFKYYQQGAEQGYTLAKYHAGKCFLE------------------ 720
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+G+ EEA A+ G AQY L +G+GV N +E W A
Sbjct: 721 ------GIGVKANPEEAFNYFKDAAGYGEAAAQYHAGHMLMQGKGVAMNKEEGLNWLNTA 774
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
AE Y A Y CY G+G+ +A W + AAD GH KA
Sbjct: 775 AEENYANAQYALGNCYLMGDGVEEDEDRAMYWFELAADNGHEKA 818
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 98/233 (42%), Gaps = 47/233 (20%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
W L +A L G+ ++ G GV +N DKAL+ + + A G A V+ GL Y +
Sbjct: 520 EWYQKGAALNDANCLFAAGRCYRFGNGVEENPDKALEYYHRSAELGDPKAYVELGLCYEQ 579
Query: 150 -----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-------EEAVKLLYQASIAGHV 197
D ++ A+ ++AA L GQ+ LG Y+ ++ ++LL +A+ G
Sbjct: 580 EYGVSFDAQQ-AMDYMQRAADLDYYYGQYKLGYYYMHGLVTQDTKKGLELLEKAAEKGFP 638
Query: 198 RAQ-----------------------YQ-----------LALCLHRGRGVDFNLQEAARW 223
+A YQ L LC G G++ N EA ++
Sbjct: 639 QAMLEIGDYYLYDYDDIDQSANAIGYYQQAQEQGVVHHGLGLCYEYGIGIEPNAAEAFKY 698
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
Y + AE GY A Y+ C+ G G+ + +A + K AA G AQ G
Sbjct: 699 YQQGAEQGYTLAKYHAGKCFLEGIGVKANPEEAFNYFKDAAGYGEAAAQYHAG 751
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G+ +++G +L+KA+ F +G A GS +M + +Y E D ++A + QA
Sbjct: 430 GRIYRYGINGTPDLEKAIALFERGLAMGSPYSMTEMAFLYEDGTLEADYQKA-FDYFHQA 488
Query: 164 AVLGDPAGQFNLGISYLQE----------EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
A L P G +YL+ A + + + + C G GV
Sbjct: 489 ATLDYPFAIHMTG-TYLENGYHNQQPDPASAFEWYQKGAALNDANCLFAAGRCYRFGNGV 547
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ N +A +Y R+AE G +A LCY G+ +QA +M+RAAD + Q
Sbjct: 548 EENPDKALEYYHRSAELGDPKAYVELGLCYEQEYGVSFDAQQAMDYMQRAADLDYYYGQY 607
Query: 274 EHGL----GLFTEGEMMKAVVYLELATRAG 299
+ G GL T+ + K + LE A G
Sbjct: 608 KLGYYYMHGLVTQ-DTKKGLELLEKAAEKG 636
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 15/212 (7%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYR 161
+ G + HG V ++ K L+ K A +G AM++ G Y + AI Y+
Sbjct: 608 KLGYYYMHGL-VTQDTKKGLELLEKAAEKGFPQAMLEIGDYYLYDYDDIDQSANAIGYYQ 666
Query: 162 QA---AVLGDPAG---QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
QA V+ G ++ +GI EA K Q + G+ A+Y C G GV
Sbjct: 667 QAQEQGVVHHGLGLCYEYGIGIEPNAAEAFKYYQQGAEQGYTLAKYHAGKCFLEGIGVKA 726
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N +EA ++ AA G A Y+ G+G+ ++ + W+ AA+ + AQ
Sbjct: 727 NPEEAFNYFKDAAGYGEAAAQYHAGHMLMQGKGVAMNKEEGLNWLNTAAEENYANAQYAL 786
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAA 303
G +G E + +A+ + ELA G A
Sbjct: 787 GNCYLMGDGVEEDEDRAMYWFELAADNGHEKA 818
>gi|119945229|ref|YP_942909.1| TPR repeat- and Sel1 domain-containing protein [Psychromonas
ingrahamii 37]
gi|119863833|gb|ABM03310.1| Sel1 domain and tetratricopeptide repeat-containing protein
[Psychromonas ingrahamii 37]
Length = 193
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G+ ++ AL F K A +G A V+ G MY E
Sbjct: 42 GVMYMMGNGIPQSYPLALKWFSKAAKQGLASAQVNLGSMYKE------------------ 83
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+LG++ EA +A++ GH Q LAL G GV N EA+RW+L+A
Sbjct: 84 ------SLGVTQNNAEAFIWYQKAALQGHAAGQNNLALMYMLGLGVTPNPIEASRWWLKA 137
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A+ G+V A + Y G G+P + +A KW ++AA G A+
Sbjct: 138 AQQGHVSAQLSLGTLYELGLGVPKNSDEAIKWWRKAAMQGDSSAK 182
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 68/153 (44%), Gaps = 12/153 (7%)
Query: 163 AAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A GD A Q NLG+ Y+ A+K +A+ G AQ L GV
Sbjct: 29 SAEYGDAASQHNLGVMYMMGNGIPQSYPLALKWFSKAAKQGLASAQVNLGSMYKESLGVT 88
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N EA WY +AA G+ N +L Y G G+ + +A +W +AA GH AQL
Sbjct: 89 QNNAEAFIWYQKAALQGHAAGQNNLALMYMLGLGVTPNPIEASRWWLKAAQQGHVSAQLS 148
Query: 275 HG----LGLFTEGEMMKAVVYLELATRAGETAA 303
G LGL +A+ + A G+++A
Sbjct: 149 LGTLYELGLGVPKNSDEAIKWWRKAAMQGDSSA 181
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 175 LGISYLQE-EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
L IS+ + E VK+ ++ G +Q+ L + G G+ + A +W+ +AA+ G
Sbjct: 12 LCISFAESGEQVKIDTLSAEYGDAASQHNLGVMYMMGNGIPQSYPLALKWFSKAAKQGLA 71
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAV 289
A N Y G+ ++ +A W ++AA GH Q L + LGL ++A
Sbjct: 72 SAQVNLGSMYKESLGVTQNNAEAFIWYQKAALQGHAAGQNNLALMYMLGLGVTPNPIEAS 131
Query: 290 VYLELATRAGETAAD 304
+ A + G +A
Sbjct: 132 RWWLKAAQQGHVSAQ 146
>gi|348676736|gb|EGZ16553.1| hypothetical protein PHYSODRAFT_501566 [Phytophthora sojae]
Length = 322
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQAAVLGDPAGQ 172
V ++L++AL + + A G A D G MY + E A+ LYRQAA P
Sbjct: 139 VPQDLERALHYWTRAAESGHMAASYDLGYMYAQGLHVGQDDEKAVQLYRQAAKQNMPEAH 198
Query: 173 FNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
LG + L E+AV +A+ AG+ AQ+ L C GRG++ + +AA+++
Sbjct: 199 RALGAACLHGRGVEQSAEQAVTHFRRAAEAGNALAQFDLGACYMLGRGIEQDHSKAAQFF 258
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
AAEGG +A + + G+G+P +A ++ + AA G
Sbjct: 259 FLAAEGGVPQAQLCLAQLFENGQGIPADREKAVQYYQLAAQGG 301
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLAL 205
E A++ +R+AA G+ QF+LG Y+ +A + + A+ G +AQ LA
Sbjct: 216 EQAVTHFRRAAEAGNALAQFDLGACYMLGRGIEQDHSKAAQFFFLAAEGGVPQAQLCLAQ 275
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+G+ + ++A ++Y AA+GG A
Sbjct: 276 LFENGQGIPADREKAVQYYQLAAQGGLQEA 305
>gi|62180323|ref|YP_216740.1| hypothetical protein SC1753 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224583751|ref|YP_002637549.1| hypothetical protein SPC_1972 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|375114651|ref|ZP_09759821.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|62127956|gb|AAX65659.1| putative TPR repeat protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224468278|gb|ACN46108.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322714797|gb|EFZ06368.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYDPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYDPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|222053397|ref|YP_002535759.1| Sel1 domain-containing protein repeat-containing protein [Geobacter
daltonii FRC-32]
gi|221562686|gb|ACM18658.1| Sel1 domain protein repeat-containing protein [Geobacter daltonii
FRC-32]
Length = 255
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 167 GDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD AG F G+ + + E V+ +A+ GH AQ+ L L G GV +L
Sbjct: 57 GDSAGDFAAGVMHYKGEGVQRDPAEAAVWFQRAANGGHASAQFNLGLLYLNGEGVAKDLG 116
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
EA W+ RAA G RA YN L Y+ G+G+ W + AA+ G+ KAQ+ G G
Sbjct: 117 EAFCWFSRAAAQGDARAQYNLGLMYARGDGVAEDMAATLNWFRLAAEQGYVKAQIYLG-G 175
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
L+ GE + +AV + +A T A V+ + +D
Sbjct: 176 LYARGEGVEKDRREAVRWFRMAAEQESTEAQVYLGVMYTKGDGVEKD 222
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
G GV+++ +A F + A G A + GL+Y D EA + +AA GD
Sbjct: 72 GEGVQRDPAEAAVWFQRAANGGHASAQFNLGLLYLNGEGVAKDLGEA-FCWFSRAAAQGD 130
Query: 169 PAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQEA 220
Q+NLG+ Y + + V A++ G+V+AQ L RG GV+ + +EA
Sbjct: 131 ARAQYNLGLMYARGDGVAEDMAATLNWFRLAAEQGYVKAQIYLGGLYARGEGVEKDRREA 190
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
RW+ AAE A + Y+ G+G+ + +A W+ RAA G AQ
Sbjct: 191 VRWFRMAAEQESTEAQVYLGVMYTKGDGVEKDNDEAAYWLNRAARKGSITAQ 242
>gi|170035069|ref|XP_001845394.1| Sel1l protein [Culex quinquefasciatus]
gi|167876852|gb|EDS40235.1| Sel1l protein [Culex quinquefasciatus]
Length = 781
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ GRG++ + KAL F + A G+ +AM G +Y E + A +++AA
Sbjct: 356 YQGGRGIQLDHQKALQYFSQAANAGNAVAMAFLGKIYLEGSDNIKADNDTAFKYFKKAAD 415
Query: 166 LGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG+P GQ LG+ +L + A+K QA+ G V Q QL G GV +
Sbjct: 416 LGNPVGQSGLGVMFLHGKGVPKDTVKALKYFTQAADQGWVDGQLQLGNMYFSGTGVKRDF 475
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ A ++Y A++ G+V A Y+ ++ G G+ S A + K A+ G
Sbjct: 476 KLANKYYNLASQSGHVLAFYHLGQMHAVGLGMMRSCPTAVELFKNVAERG 525
>gi|322785900|gb|EFZ12519.1| hypothetical protein SINV_14183 [Solenopsis invicta]
Length = 508
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAA 164
++ GRGV + ++A+ F A G+ +AM G +Y E + E A +++AA
Sbjct: 126 HYQGGRGVPLDHERAVQYFQHAADAGNPVAMAFLGKIYLEGSEIVKQDNETAYKYFKKAA 185
Query: 165 VLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
LG+P GQ LG+ YL +A++ QA+ G V Q QL G GV +
Sbjct: 186 ELGNPVGQSGLGLMYLYGMGVERNTAKALQYFSQAAEQGWVDGQLQLGNMYFSGIGVRRD 245
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ A +++ A++ G+V A YN + ++ G G+ S A + MK A+ G QL
Sbjct: 246 YKMANKYFNLASQSGHVLAYYNLAQMHATGTGMMRSCPTAVELMKNVAERGKWSDQLMVA 305
Query: 277 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 311
+ EG + +A + L + G A IL
Sbjct: 306 HTDYREGRVNEAFLNYALFSEMGYEVAQSNAAFIL 340
>gi|237746477|ref|ZP_04576957.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377828|gb|EEO27919.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 523
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 100/232 (43%), Gaps = 22/232 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
F+ G G KN +A + + + A G A G +Y + A A+ YR+AA
Sbjct: 162 FEKGLGTTKNSREAFNWYHRAATAGIPNAQYKLGYLYEKGIGVHASPAQALLWYRKAAEG 221
Query: 167 GDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G + Q LG +Y + EA + Y+A+ G+V+AQ LA G GV +
Sbjct: 222 GIASAQTRLGRAYSEGRGVKRDDLEAARWFYKAAEQGNVQAQTALAWLYETGLGVGKDEP 281
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 274
AA WY +AAE GY A N Y G G+ ARKW + AA G+ A
Sbjct: 282 RAASWYTKAAEKGYAPAQNNLGYLYDSGTGVMQDFITARKWYEAAAAQGNVSAMFNLGQL 341
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS----ATSRDRA 322
H LG T + +A + A G A + N+ + L AT R RA
Sbjct: 342 HYLGHGTPQDYARAAGWFAKAAEQGHPKA--LNNLGMAYLDGMGVATDRVRA 391
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 30/187 (16%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
++ +V G F G GV + KA +LK A + ++A + +
Sbjct: 114 KDPLVQTALGNMFSMGLGVPTDHGKAFSWYLKAARQNHSIAQLYTAYSF----------- 162
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
+ LG + EA ++A+ AG AQY+L +G GV +
Sbjct: 163 -------------EKGLGTTKNSREAFNWYHRAATAGIPNAQYKLGYLYEKGIGVHASPA 209
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------ 272
+A WY +AAEGG A YS G G+ +A +W +AA+ G+ +AQ
Sbjct: 210 QALLWYRKAAEGGIASAQTRLGRAYSEGRGVKRDDLEAARWFYKAAEQGNVQAQTALAWL 269
Query: 273 LEHGLGL 279
E GLG+
Sbjct: 270 YETGLGV 276
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-A 156
A R G+ + GRGV+++ +A F K A +G+ A +Y + K E A
Sbjct: 224 ASAQTRLGRAYSEGRGVKRDDLEAARWFYKAAEQGNVQAQTALAWLYETGLGVGKDEPRA 283
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAV-------KLLYQASIA-GHVRAQYQLALCLH 208
S Y +AA G Q NLG Y V + Y+A+ A G+V A + L +
Sbjct: 284 ASWYTKAAEKGYAPAQNNLGYLYDSGTGVMQDFITARKWYEAAAAQGNVSAMFNLGQLHY 343
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G G + AA W+ +AAE G+ +A+ N + Y G G+ +A + +AA G+
Sbjct: 344 LGHGTPQDYARAAGWFAKAAEQGHPKALNNLGMAYLDGMGVATDRVRAGHYFLKAAKRGN 403
Query: 269 GKAQ 272
AQ
Sbjct: 404 AHAQ 407
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A L W ++ G GV K+ +A + K A +G A + G +Y M
Sbjct: 261 QAQTALAW--LYETGLGVGKDEPRAASWYTKAAEKGYAPAQNNLGYLYDSGTGVMQDFIT 318
Query: 156 AISLYRQAAVLGDPAGQFNLG-ISYLQE-------EAVKLLYQASIAGHVRAQYQLALCL 207
A Y AA G+ + FNLG + YL A +A+ GH +A L +
Sbjct: 319 ARKWYEAAAAQGNVSAMFNLGQLHYLGHGTPQDYARAAGWFAKAAEQGHPKALNNLGMAY 378
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY-SFGEGLPLSHRQ-----ARKWMK 261
G GV + A ++L+AA+ G A YN + Y E L ++R ARKW
Sbjct: 379 LDGMGVATDRVRAGHYFLKAAKRGNAHAQYNLATLYVQHPEALTKANRAKTDALARKWFG 438
Query: 262 RAADCGHGKA 271
++A GH A
Sbjct: 439 KSAANGHAAA 448
>gi|445220263|ref|ZP_21402909.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444870697|gb|ELX95182.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
Length = 512
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPSSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|418825129|ref|ZP_13380440.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392817454|gb|EJA73367.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
Length = 556
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 337 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 396
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 397 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 456
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 457 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 513
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 360 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 419
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 420 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 479
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVI 310
AQL G ++ G + +A ++ +A+ E + D +I
Sbjct: 480 FTPAQLALG-EIYAHGRQGVPKDNKQAYIWYYMASIYTEKSKDDCSALI 527
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 119 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 178
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 179 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 238
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 239 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 296
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI-----SL 159
L G + +G GV ++ +A+ +G T + +Y DK A +
Sbjct: 271 LYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLSALY---DKAHPADRVHSQTW 327
Query: 160 YRQAAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGR 211
YR+ A Q+N G+ Y L++ + L + +A+ G AQ + + +G
Sbjct: 328 YRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGE 387
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV + Q+A WY +AA G A + + +FG G+ S RQA W ++AA KA
Sbjct: 388 GVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKA 447
Query: 272 QLEHGLGLFT 281
Q + G+ T
Sbjct: 448 QYQLGVAYST 457
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 104 EQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 163
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 164 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 215
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+ V+ L Q + G AQ+ L GR V + + A +W +A + G + +
Sbjct: 98 QYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYH 157
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGET 301
Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 158 YNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASP 217
Query: 302 AADHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 218 TND--AGVVRGQGSASS 232
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 88/240 (36%), Gaps = 29/240 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 155 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 214
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 215 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 274
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G GV + ++A W G Y S Y + P ++ W ++ A
Sbjct: 275 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLSALYD--KAHPADRVHSQTWYRKTA 332
Query: 265 DCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVILQQLSATSRD 320
K Q G+ + ++K A+ + A G A V+ Q S+D
Sbjct: 333 QRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQD 392
>gi|386745030|ref|YP_006218209.1| hypothetical protein S70_18585 [Providencia stuartii MRSN 2154]
gi|384481723|gb|AFH95518.1| hypothetical protein S70_18585 [Providencia stuartii MRSN 2154]
Length = 343
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-----MYWEMDKKEAA 156
++L W ++ G V ++ KA + A + + A+ G MY + D ++A
Sbjct: 152 LMLAYW---YEKGIAVTEDPQKAQQIYQSLAKQNNPQALYLLGYQAATGMYDKADYQQA- 207
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLH 208
+ ++A LG Q +LG+ YL + A+K L AS G + AQ+ LAL
Sbjct: 208 YQYFSRSAQLGFSPAQNSLGMLYLHGQGVKKEVKSAIKWLTLASEQGEISAQFNLALIYA 267
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
RG G+ + +A W++RAA+ G A Y T CY +G G+ R+A W K AA G+
Sbjct: 268 RGDGMPADQAKACHWFIRAAQHGNNDAQYATGACYQYGMGVKQDDRKALYWYKLAASQGN 327
Query: 269 GKAQ 272
+A+
Sbjct: 328 ERAE 331
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
++A + +++ G AQ L + G+GV ++ A +W A+E G + A +N +L
Sbjct: 205 QQAYQYFSRSAQLGFSPAQNSLGMLYLHGQGVKKEVKSAIKWLTLASEQGEISAQFNLAL 264
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATR 297
Y+ G+G+P +A W RAA G+ AQ G G+ + + KA+ + +LA
Sbjct: 265 IYARGDGMPADQAKACHWFIRAAQHGNNDAQYATGACYQYGMGVKQDDRKALYWYKLAAS 324
Query: 298 AGETAADHVKNVILQ 312
G A+ K +IL+
Sbjct: 325 QGNERAEK-KVLILE 338
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
+LL +++ G AQ+ LA+ L + L EAA+WY +A+ G+ +A N +L Y
Sbjct: 31 QLLLKSAQDGQAEAQFNLAMLLQSEK----QLTEAAKWYRLSAQQGFTKAQINLALLYQQ 86
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQL 273
G G+ S Q WMK+AA+ G QL
Sbjct: 87 GNGVDKSPEQMLFWMKKAAEAGDPLGQL 114
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 167 GDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
G QFNL + E EA K ++ G +AQ LAL +G GVD + ++
Sbjct: 40 GQAEAQFNLAMLLQSEKQLTEAAKWYRLSAQQGFTKAQINLALLYQQGNGVDKSPEQMLF 99
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFG--EGLPLSHRQARKWMKRAADCGHGKAQL------E 274
W +AAE G N + G + LP + +QA W+ +AA A+L E
Sbjct: 100 WMKKAAEAGDPLGQLNMAEYTLSGVDKLLPKNKQQAEAWLVKAAAQHFQPAELMLAYWYE 159
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETA 302
G+ + TE +Y LA + A
Sbjct: 160 KGIAV-TEDPQKAQQIYQSLAKQNNPQA 186
>gi|198244980|ref|YP_002215386.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|375118865|ref|ZP_09764032.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|421370368|ref|ZP_15820533.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421382465|ref|ZP_15832511.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421401148|ref|ZP_15851024.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421410615|ref|ZP_15860396.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421412882|ref|ZP_15862636.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421416874|ref|ZP_15866593.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421421869|ref|ZP_15871537.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421447995|ref|ZP_15897391.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|436601631|ref|ZP_20513054.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436797836|ref|ZP_20523282.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|437162206|ref|ZP_20695865.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437177170|ref|ZP_20703650.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437183787|ref|ZP_20707883.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437261326|ref|ZP_20718396.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437292392|ref|ZP_20731919.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437321230|ref|ZP_20738579.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437340965|ref|ZP_20744516.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437381810|ref|ZP_20750420.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437754893|ref|ZP_20834148.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|438095574|ref|ZP_20862093.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438096941|ref|ZP_20862201.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438112284|ref|ZP_20868881.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|445141428|ref|ZP_21385450.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445158254|ref|ZP_21393110.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|445175032|ref|ZP_21397210.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445204005|ref|ZP_21401161.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445243157|ref|ZP_21407899.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445330108|ref|ZP_21413727.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|197939496|gb|ACH76829.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|326623132|gb|EGE29477.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|395997573|gb|EJI06613.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396006451|gb|EJI15414.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396021213|gb|EJI30039.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396022748|gb|EJI31561.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396039970|gb|EJI48594.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396041184|gb|EJI49807.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396045051|gb|EJI53646.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396074292|gb|EJI82583.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|434960762|gb|ELL54112.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434974750|gb|ELL67080.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|435143161|gb|ELN30029.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435154850|gb|ELN41408.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435162149|gb|ELN48340.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435163782|gb|ELN49918.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435181003|gb|ELN66096.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435194394|gb|ELN78848.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435196828|gb|ELN81152.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435202875|gb|ELN86683.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435310929|gb|ELO85247.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435314012|gb|ELO87512.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435327286|gb|ELO99028.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435330362|gb|ELP01628.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|444845635|gb|ELX70828.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444851130|gb|ELX76225.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444858766|gb|ELX83742.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444862088|gb|ELX86952.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444878260|gb|ELY02382.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444890745|gb|ELY14050.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPSSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|378955266|ref|YP_005212753.1| hypothetical protein SPUL_1571 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357205877|gb|AET53923.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSAQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPSSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G A Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSAQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G AQ G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSAQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|332025179|gb|EGI65359.1| Protein sel-1-like protein 1 [Acromyrmex echinatior]
Length = 763
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAV 165
++ GRGV + ++A+ F A G+ +AM G +Y E + E A +++AA
Sbjct: 375 YQGGRGVPLDHERAVQYFQHAADAGNPVAMAFLGKIYLEGSEIVKQDNETAYKYFKKAAE 434
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
LG+P GQ LG+ YL +A++ QA+ G V Q QL G GV +
Sbjct: 435 LGNPVGQSGLGLMYLYGMGVERNTGKALQYFSQAAEQGWVDGQLQLGNMYFSGIGVRRDY 494
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A +++ A++ G+V A YN + ++ G G+ S A + MK A+ G QL
Sbjct: 495 KMANKYFNLASQSGHVLAYYNLAQMHATGTGMMRSCPTAVELMKNVAERGKWSDQLMVAH 554
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 311
+ +G + +A + L + G A IL
Sbjct: 555 SDYRDGRVNEAFLNYALFSEMGYEVAQSNAAFIL 588
>gi|443709979|gb|ELU04399.1| hypothetical protein CAPTEDRAFT_223518 [Capitella teleta]
Length = 535
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
EA +L AS G+ +A Y LA+C G+GV ++ +AA+ Y AA G +++YN SL
Sbjct: 259 EAFQLWEHASSKGYAKASYNLAICYETGKGVPQDMSQAAKLYHIAASQGCSKSLYNLSLM 318
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG---EMMKAVVYLELATRAG 299
Y G G+ +A++ +++AA G +AQ E G+ ++TE +M KA A +
Sbjct: 319 YMDGCGVTRDENKAKQLLEKAAASGLKQAQTELGV-IYTEHKHRDMQKAASLFSWAAKQQ 377
Query: 300 ETAADHVKNVILQQ 313
++AA + + +Q
Sbjct: 378 DSAAQYYLGICYEQ 391
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD------KKEAAISLYRQAA 164
++ G+GV +++ +A + A++G + ++ + LMY MD + A L +AA
Sbjct: 283 YETGKGVPQDMSQAAKLYHIAASQGCSKSLYNLSLMY--MDGCGVTRDENKAKQLLEKAA 340
Query: 165 VLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q LG+ Y + ++A L A+ AQY L +C +G GV N
Sbjct: 341 ASGLKQAQTELGVIYTEHKHRDMQKAASLFSWAAKQQDSAAQYYLGICYEQGLGVPCNPC 400
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKAQ 272
+AA Y ++A GY+ A +N + + G GLP +A K + AA G +Q
Sbjct: 401 KAAELYRQSANAGYLSAYHNLAKLFEQGAAGLPEDRNEALKLYEMAAKKGCASSQ 455
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
N EA + + A+ GY +A YN ++CY G+G+P QA K AA G K+
Sbjct: 256 NYNEAFQLWEHASSKGYAKASYNLAICYETGKGVPQDMSQAAKLYHIAASQGCSKS 311
>gi|188590842|ref|YP_001795442.1| hypothetical protein RALTA_A0047 [Cupriavidus taiwanensis LMG
19424]
gi|170937736|emb|CAP62720.1| conserved hypothetical protein, tetratricopeptide repeats; putative
exported protein [Cupriavidus taiwanensis LMG 19424]
Length = 233
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 148 WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRA 199
+E + + A+ + AA G+ QFN + L+ +EA+ L +A+ G A
Sbjct: 46 YESGRFDEALRGFAGAARQGNRLAQFNYAMMLLRGEGTAARPQEALVWLRKAADNGMTHA 105
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
QY RG+ V +L+EA RWY RAA+GG+V+A + Y G G+P + QA W
Sbjct: 106 QYTWGDLYERGQLVPKSLEEANRWYERAAQGGHVQAQMELATNYFTGRGVPRDYGQAFAW 165
Query: 260 MKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
+RAA G G AQ E G + ++ +A ++ A G+T A
Sbjct: 166 YQRAASAGDGGAQYIVGSFYERGEPGVVDQDIEQAKIWYARAAARGDTGA 215
>gi|417365455|ref|ZP_12138065.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|353594374|gb|EHC51907.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|197249692|ref|YP_002146271.1| hypothetical protein SeAg_B1381 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|440762949|ref|ZP_20941998.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440768112|ref|ZP_20947086.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440774562|ref|ZP_20953449.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|197213395|gb|ACH50792.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|436412785|gb|ELP10723.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436418617|gb|ELP16500.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|436421699|gb|ELP19543.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FTPAQ 423
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPSSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|428169149|gb|EKX38086.1| hypothetical protein GUITHDRAFT_77568, partial [Guillardia theta
CCMP2712]
Length = 288
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 78/173 (45%), Gaps = 27/173 (15%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE------MDKKEAAISLYRQAAVLGDP 169
G+ N A+ +K A RGS AM GLMY E D ++A L R A
Sbjct: 103 GLEPNASAAVPLLIKAADRGSKRAMTWVGLMYAEGRYGMLQDDEKAEWYLLRSAR----- 157
Query: 170 AGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
++ G +E I RA ++LA GRGV N ++A WY RA+
Sbjct: 158 --EYKEGSQVGKE----------IRAGARALFKLAQRFAEGRGVKQNYEKAIDWYSRASI 205
Query: 230 GGYVRAMYNTSLCY--SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
GY A Y +CY G GL S A +W RA++ GH KAQ + LGLF
Sbjct: 206 KGYSPAFYELGMCYIKGLGHGLDQSDSAAVEWYARASEEGHAKAQFK--LGLF 256
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 50/78 (64%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+ ++ G+ +AQY L +C G GV+ + + AA W+ ++A G+V+A Y +LCY +G+G+
Sbjct: 8 EGALKGNDKAQYHLGICYAEGLGVEKSYKRAAGWFSKSARQGHVKATYELALCYRYGDGV 67
Query: 250 PLSHRQARKWMKRAADCG 267
S+ + R+ ++ A+ G
Sbjct: 68 SKSYTKCRRLLQSASRKG 85
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE- 154
A L + +RF GRGV++N +KA+D + + + +G + A + G+ Y + +D+ +
Sbjct: 173 ARALFKLAQRFAEGRGVKQNYEKAIDWYSRASIKGYSPAFYELGMCYIKGLGHGLDQSDS 232
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ 181
AA+ Y +A+ G QF LG+ YL+
Sbjct: 233 AAVEWYARASEEGHAKAQFKLGLFYLK 259
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHR 209
S + + A+ G+ Q++LGI Y + V+ Y+ + GHV+A Y+LALC
Sbjct: 4 SWFLEGALKGNDKAQYHLGICYAEGLGVEKSYKRAAGWFSKSARQGHVKATYELALCYRY 63
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCGH 268
G GV + + R A+ G + A+ + ++ + G+ GL + A + +AAD G
Sbjct: 64 GDGVSKSYTKCRRLLQSASRKGSLPALEDLAVAHLKGKLGLEPNASAAVPLLIKAADRGS 123
Query: 269 GKAQLEHGLGLFTEG 283
+A GL ++ EG
Sbjct: 124 KRAMTWVGL-MYAEG 137
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
A W+L A G +A Y+ +CY+ G G+ S+++A W ++A GH KA E L
Sbjct: 3 ASWFLEGALKGNDKAQYHLGICYAEGLGVEKSYKRAAGWFSKSARQGHVKATYELAL 59
>gi|420160287|ref|ZP_14667071.1| Sel1 repeat protein, partial [Capnocytophaga ochracea str. Holt 25]
gi|394760742|gb|EJF43245.1| Sel1 repeat protein, partial [Capnocytophaga ochracea str. Holt 25]
Length = 251
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+SY Q+ VK L + + G V+AQ +LA +G+GV + QEA W + AE G + A
Sbjct: 15 LSYGQDANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQ 74
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y + CY G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 75 YQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q L +Y + + V+ YQ ++ G + AQYQLA C G+GV + Q
Sbjct: 33 GDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQYQLAQCYFNGKGVPKSPQ 92
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 274
+ W + A+ G A +LCY G+G+ S + +++ A+ + + QL+
Sbjct: 93 KGVEWLTKVADAGNPEAQRELALCYRDGKGVEQSKEKYYALIEKHAEKENPEVQLDLAKA 152
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAAD 304
+ G ++ KA + E A++ G + A+
Sbjct: 153 YHSGEGVTKDVNKAKYWAEQASKNGNSEAE 182
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLG 176
D + +K A +G A + Y++ +EA + L + A GD Q+ L
Sbjct: 20 DANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWL-EKVAETGDLNAQYQLA 78
Query: 177 ISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL--- 225
Y ++ V+ L + + AG+ AQ +LALC G+GV+ Q ++Y
Sbjct: 79 QCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVE---QSKEKYYALIE 135
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ AE + + Y GEG+ +A+ W ++A+ G+ +A++
Sbjct: 136 KHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEM 183
>gi|417539008|ref|ZP_12191421.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|353665346|gb|EHD03501.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGCQGVPKDNKQAYIWYYMAS 452
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 FTPAQLALG 427
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + G+ V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGQYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----- 159
L G + +G GV ++ +A+ +G T + +Y DK A +
Sbjct: 210 LYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADQVHSQTW 266
Query: 160 YRQAAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGR 211
YR+ A Q+N G+ Y L++ + L + +A+ G AQ + + +G
Sbjct: 267 YRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGE 326
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV + Q+A WY +AA G A + + +FG G+ S RQA W ++AA KA
Sbjct: 327 GVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKA 386
Query: 272 QLEHGLGLFT 281
Q + G+ T
Sbjct: 387 QYQLGVAYST 396
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF+LG Y + + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFSLGSWYAEGQYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L G+ V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGQYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADQVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|315224578|ref|ZP_07866404.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea F0287]
gi|314945444|gb|EFS97467.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea F0287]
Length = 815
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+SY Q+ VK L + + G V+AQ +LA +G+GV + QEA W + AE G + A
Sbjct: 15 LSYGQDANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQ 74
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y + CY G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 75 YQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q L +Y + + V+ YQ ++ G + AQYQLA C G+GV + Q
Sbjct: 33 GDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQYQLAQCYFNGKGVPKSPQ 92
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 274
+ W + A+ G A +LCY G+G+ S + +++ A+ + + QL+
Sbjct: 93 KGVEWLTKVADAGNPEAQRELALCYRDGKGVEQSKEKYYALIEKHAEKENPEVQLDLAKA 152
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAAD 304
+ G ++ KA + E A++ G + A+
Sbjct: 153 YHSGEGVTKDVNKAKYWAEQASKNGNSEAE 182
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 123 KALDSFLKGAARGSTLA---MVDAGLMYWEMDKKEA-AISLYRQAAVLGDPAGQFNLGIS 178
+A++ + A +G+T A + DA L ++K EA AI + +AA GD + LG
Sbjct: 198 EAIERLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKAAKGGDAEAMYQLGNF 257
Query: 179 YLQ----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
Y ++A+ QA+ G+ AQ QLALC + G G + + ++A W L++
Sbjct: 258 YFYGNSPLIGKYYKKAINYYTQAANKGNAAAQAQLALCFYNGIGTNASPKDAFSWILKSV 317
Query: 229 EGGYV-RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM-- 285
+A N +CY+ G G S+ QA + ++AA+ G AQ G L EG++
Sbjct: 318 NTNPTPKAQNNLGVCYAVGIGAHPSNAQALESFQKAAEAGDVTAQYNLGNMLLQEGQLDV 377
Query: 286 MKAVVYLE 293
K YLE
Sbjct: 378 KKGFDYLE 385
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ + QY LA C + G G+D + ++AA +Y +A Y A + CY GEG+ S +
Sbjct: 729 YAQGQYNLANCYYNGNGIDRSYEKAANYYKLSARKDYAPAQFRLGHCYYHGEGIEQSDSR 788
Query: 256 ARKWMKRAADCGHGK 270
A W ++A D G K
Sbjct: 789 AADWFEQACDNGEKK 803
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLG 176
D + +K A +G A + Y++ +EA + L + A GD Q+ L
Sbjct: 20 DANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWL-EKVAETGDLNAQYQLA 78
Query: 177 ISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL--- 225
Y ++ V+ L + + AG+ AQ +LALC G+GV+ Q ++Y
Sbjct: 79 QCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVE---QSKEKYYALIE 135
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ AE + + Y GEG+ +A+ W ++A+ G+ +A++
Sbjct: 136 KHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEM 183
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE------EAVKLLYQASIAGHVRAQYQLALCLHR 209
A+ +++AA GD Q+NLG LQE + L +A+ A H+ A +L
Sbjct: 346 ALESFQKAAEAGDVTAQYNLGNMLLQEGQLDVKKGFDYLEKAAAANHLLALKKLGDLYFN 405
Query: 210 GRGVDFNLQEAARWYLRAA------------------EGGYVRAMYNTSLCYSFGEGLPL 251
G+ + + + A +Y +A+ E Y +YN S CY+ G+G+
Sbjct: 406 GKYTNQSFERAFEYYTKASKQTPTPQKEMLDYFYQGQEEAYADVLYNLSQCYAEGKGVKK 465
Query: 252 SHRQARKWMKRAA 264
S R+A KW ++A
Sbjct: 466 SMREAGKWAVKSA 478
>gi|213857328|ref|ZP_03384299.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 431
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 198 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 257
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 258 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 317
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 318 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 374
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q EAV YQ ++A G AQ L +
Sbjct: 221 ALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 280
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 281 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLKAAEQG 340
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 341 FTPAQLALG 349
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-- 198
++ A+ YR+AA LGD + Q LG +Y+ + Q ++ AG VR
Sbjct: 29 RQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQ 88
Query: 199 -----AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
AQ++L + G+GV + Q+ A +AAE Y A + Y +GEG+P +
Sbjct: 89 GSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDY 148
Query: 254 RQARKWMK 261
RQA W+
Sbjct: 149 RQAVYWLN 156
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 135 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 191
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A QFN G+ Y L++ + L + +A+ G AQ + + +G V
Sbjct: 192 TAQRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVS 251
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 252 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 311
Query: 275 HGL 277
G+
Sbjct: 312 LGV 314
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 90/240 (37%), Gaps = 29/240 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 16 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 75
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 76 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 135
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G GV + ++A W G Y + L + + P ++ W ++ A
Sbjct: 136 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPG--HIPLNALYDKAHPADQVHSQTWYRKTA 193
Query: 265 DCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVILQQLSATSRD 320
K Q G+ + ++K A+ + A G A V+ Q A S+D
Sbjct: 194 QRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQD 253
>gi|303237418|ref|ZP_07323984.1| Sel1 repeat protein [Prevotella disiens FB035-09AN]
gi|302482368|gb|EFL45397.1| Sel1 repeat protein [Prevotella disiens FB035-09AN]
Length = 429
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
E +L A+ AG V AQY + C G GV+ N EAA+WY +AAE G A +
Sbjct: 46 EEFQLYKDAAKAGDVDAQYNVGYCYENGEGVEQNYSEAAKWYRKAAEQGLSAAQHGLGYL 105
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHG 269
Y++G+G+ + +A KW +AA+ G+G
Sbjct: 106 YAYGQGVKENWTEAAKWFSKAAEQGYG 132
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 84/188 (44%), Gaps = 28/188 (14%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLH 208
LY+ AA GD Q+N+G Y E V+ Y +A+ G AQ+ L
Sbjct: 48 FQLYKDAAKAGDVDAQYNVGYCYENGEGVEQNYSEAAKWYRKAAEQGLSAAQHGLGYLYA 107
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD--- 265
G+GV N EAA+W+ +AAE GY +++ CY G G+P + +A K+ ++A D
Sbjct: 108 YGQGVKENWTEAAKWFSKAAEQGYGLSIFAMGACYEDGNGVPQNFVEAAKYYRKAVDKNV 167
Query: 266 ------------CGHGKAQ-LEHGLGLFTEGEMMK---AVVYLELATRAGE-TAADHVKN 308
G G Q E + LF +G ++ A YL L G AD +
Sbjct: 168 VEAYEALGRFYYIGGGVPQNYEEAVKLFAKGAALRNPNAQYYLGLCYHFGNGIKADTTEA 227
Query: 309 VILQQLSA 316
V L LSA
Sbjct: 228 VKLYLLSA 235
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKK 153
LR G + G G++ + +A+ +L A +G A + G Y D K
Sbjct: 201 LRNPNAQYYLGLCYHFGNGIKADTTEAVKLYLLSAEQGFAPAQNELGNFYLTDPTHKDYK 260
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLAL 205
+A + QA P FN+ + Y + + AV+ +A++AG+ A ++ +
Sbjct: 261 KA-LEWLNQAVAQDLPDAFFNMALCYEEGWGVEQNLKTAVEWNRKAALAGNAEAITKMGI 319
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
G+GV+ N+ +A +WYL+ AE G A N + C G G+ ++ +A KW+++A
Sbjct: 320 AYEEGKGVEQNMTDAVKWYLKGAELGNSDAQTNYAKCLLQGNGITQNYTEAIKWLEKA 377
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 54/258 (20%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+GV++N +A F K A +G L++ G Y + + EAA YR+
Sbjct: 103 GYLYAYGQGVKENWTEAAKWFSKAAEQGYGLSIFAMGACYEDGNGVPQNFVEAA-KYYRK 161
Query: 163 AAVLG-----DPAGQFNL---GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A + G+F G+ EEAVKL + + + AQY L LC H G G+
Sbjct: 162 AVDKNVVEAYEALGRFYYIGGGVPQNYEEAVKLFAKGAALRNPNAQYYLGLCYHFGNGIK 221
Query: 215 FNLQEAARWYLRAAEGGYV-----------------------------------RAMYNT 239
+ EA + YL +AE G+ A +N
Sbjct: 222 ADTTEAVKLYLLSAEQGFAPAQNELGNFYLTDPTHKDYKKALEWLNQAVAQDLPDAFFNM 281
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVV-YLEL 294
+LCY G G+ + + A +W ++AA G+ +A + G+ G E M AV YL+
Sbjct: 282 ALCYEEGWGVEQNLKTAVEWNRKAALAGNAEAITKMGIAYEEGKGVEQNMTDAVKWYLKG 341
Query: 295 ATRAGETAADHVKNVILQ 312
A A + +LQ
Sbjct: 342 AELGNSDAQTNYAKCLLQ 359
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
++ G GV +NL A++ K A G+ A+ G+ Y E E A+ Y + A L
Sbjct: 285 YEEGWGVEQNLKTAVEWNRKAALAGNAEAITKMGIAYEEGKGVEQNMTDAVKWYLKGAEL 344
Query: 167 GDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ Q N GI+ EA+K L +A + A L C G GV +L+
Sbjct: 345 GNSDAQTNYAKCLLQGNGITQNYTEAIKWLEKAVAQKNPIAINNLGFCYLNGFGVTADLE 404
Query: 219 EAARWYLRAAEGGYVRAMYNTSL 241
+A +++ +AA+ GY A N +
Sbjct: 405 KAEQYFQKAADMGYELAKENLKM 427
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKE---AAISLYRQA 163
G +++G GV +N +A + K A +G + A G +Y + KE A + +A
Sbjct: 67 GYCYENGEGVEQNYSEAAKWYRKAAEQGLSAAQHGLGYLYAYGQGVKENWTEAAKWFSKA 126
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G F +G Y EA K +A V A L + G GV
Sbjct: 127 AEQGYGLSIFAMGACYEDGNGVPQNFVEAAKYYRKAVDKNVVEAYEALGRFYYIGGGVPQ 186
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N +EA + + + A A Y LCY FG G+ +A K +A+ G AQ E
Sbjct: 187 NYEEAVKLFAKGAALRNPNAQYYLGLCYHFGNGIKADTTEAVKLYLLSAEQGFAPAQNEL 246
Query: 276 G 276
G
Sbjct: 247 G 247
>gi|187250846|ref|YP_001875328.1| Sel1 domain-containing protein repeat-containing protein
[Elusimicrobium minutum Pei191]
gi|186971006|gb|ACC97991.1| Sel1 domain protein repeat-containing protein [Elusimicrobium
minutum Pei191]
Length = 464
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
NDALR + G + + RGV+++ AL A G+ AM+D +Y+++
Sbjct: 82 NDALREV---------GFSYLNARGVKRDFRTALKHLTNAADSGNVQAMLDIAALYYDLK 132
Query: 152 KKEAAISLYRQAAVLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLAL 205
K Y +AA G AG L Y E+ + L + + G + A QLA
Sbjct: 133 KPREEYEWYEKAAASGAEAGMQILVDRYCYAARKDGEKCLIWLTKLADGGSIEAMKQLAQ 192
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+G L++ WY RAA+ G V AM Y+ G + A KW AA
Sbjct: 193 IYEKGEITAKTLEKTEYWYERAAQAGDVEAMSLVGQAYALGSMHTKDAKLAFKWNLEAAK 252
Query: 266 CGHGKAQL----EHGLGLFTEGEMMKAVVYLELATRAGE 300
G+ KA + G FT +M KAV E T+A E
Sbjct: 253 QGNEKAIFALCSSYIYGQFTSKDMKKAV---EWCTKAAE 288
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 6/152 (3%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLG 176
V+K+L KA+ F K A G ++ + L Y + + A + A+L + + LG
Sbjct: 309 VKKDLPKAVSWFTKAAQAGDGSSIGELSLYYLKAKNYDKAFEWASKGALLDNEQSAYVLG 368
Query: 177 ISYLQEEAVK------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y+ VK L + + + + L A WYLRAA+
Sbjct: 369 HLYMHGLGVKKDLAQALKWNTKVVSLNKENFLYMYNLAEVYTAQRKYSNAFTWYLRAAKA 428
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
G+ +M + Y G G + AR W K+
Sbjct: 429 GHEPSMKELVVMYVAGRGTEKNLDAARYWQKK 460
>gi|194445007|ref|YP_002041009.1| hypothetical protein SNSL254_A1890 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|418809293|ref|ZP_13364845.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418813448|ref|ZP_13368969.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418817760|ref|ZP_13373244.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418820670|ref|ZP_13376102.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418833612|ref|ZP_13388535.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418836829|ref|ZP_13391713.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418840396|ref|ZP_13395225.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418850433|ref|ZP_13405149.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418854179|ref|ZP_13408858.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418866940|ref|ZP_13421401.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|194403670|gb|ACF63892.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|392773378|gb|EJA30074.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392774674|gb|EJA31369.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392787299|gb|EJA43841.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392792230|gb|EJA48694.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392795446|gb|EJA51818.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392801190|gb|EJA57420.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392810886|gb|EJA66898.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392818283|gb|EJA74167.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392824972|gb|EJA80730.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392840052|gb|EJA95590.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVI 310
AQL G ++ G + +A ++ +A+ E + D +I
Sbjct: 419 FTPAQLALG-EIYAHGRQGVPKDNKQAYIWYYMASIYTEKSKDDCSALI 466
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLSALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 88/240 (36%), Gaps = 29/240 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G GV + ++A W G Y S Y + P ++ W ++ A
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLSALYD--KAHPADRVHSQTWYRKTA 271
Query: 265 DCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVILQQLSATSRD 320
K Q G+ + ++K A+ + A G A V+ Q S+D
Sbjct: 272 QRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQD 331
>gi|56413318|ref|YP_150393.1| hypothetical protein SPA1113 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|56127575|gb|AAV77081.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRDVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GR V + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRDVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVI 310
AQ G ++ G + +A ++ +A+ E + D +I
Sbjct: 419 FTPAQSALG-EIYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALI 466
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLSALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG + S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRDVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 100/277 (36%), Gaps = 67/277 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLSALYDKAHPADRVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
+A+ + A R G AA L +SA RD A
Sbjct: 333 QQALAWYRKAARQGLPAA----QTHLGIMSAFGRDVA 365
>gi|270295371|ref|ZP_06201572.1| serine/threonine protein kinase [Bacteroides sp. D20]
gi|270274618|gb|EFA20479.1| serine/threonine protein kinase [Bacteroides sp. D20]
Length = 727
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 130 KGAARGSTLAMVDAGLMYW---EMDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQ---- 181
K A +G+T A + G MY+ ++ K A Y++AA G+ Q LG Y
Sbjct: 462 KAAEQGNTEAQYELGRMYFLGRDVAKNATEAEKWYQKAANQGNAKAQNELGNLYYTGLNV 521
Query: 182 ----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
EA+K +A+ G AQY+L G+G+ N EAA+WY +AAE V A Y
Sbjct: 522 TRNYSEAIKWYQKAAEQGIASAQYKLGYMYDYGQGISQNRVEAAKWYKKAAEQENVDAQY 581
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK---AVVYLEL 294
+ + G+P +A KW K+AA+ G KAQ + G +++ G K A+ + ++
Sbjct: 582 RLGNMFFYKVGIPEDIDEAIKWYKKAAEQGDIKAQKKLG-EIYSNGARKKDPEAIKWYKM 640
Query: 295 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAM 332
A G+ A L+QL L W M
Sbjct: 641 AAERGDAEA-------LKQLGDIYEKENALEAVKWYKM 671
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYR 161
+ G + +G+G+ +N +A + K A + + A G M++ + + AI Y+
Sbjct: 546 KLGYMYDYGQGISQNRVEAAKWYKKAAEQENVDAQYRLGNMFFYKVGIPEDIDEAIKWYK 605
Query: 162 QAAVLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
+AA GD Q LG Y EA+K A+ G A QL +
Sbjct: 606 KAAEQGDIKAQKKLGEIYSNGARKKDPEAIKWYKMAAERGDAEALKQLGDIYEKE----- 660
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCGHGKAQ 272
N EA +WY A E G A +N L Y +G+ G+P + +A KW ++AA+ G AQ
Sbjct: 661 NALEAVKWYKMAIEQGNASASFNLGLIYEYGKPGIPKNKAEAIKWYRKAAEQGSETAQ 718
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 66/139 (47%), Gaps = 6/139 (4%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE--AAISLYRQA 163
R G F + G+ +++D+A+ + K A +G A G +Y +K+ AI Y+ A
Sbjct: 582 RLGNMFFYKVGIPEDIDEAIKWYKKAAEQGDIKAQKKLGEIYSNGARKKDPEAIKWYKMA 641
Query: 164 AVLGDPAGQFNLGISYLQE---EAVKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNLQE 219
A GD LG Y +E EAVK A G+ A + L L G+ G+ N E
Sbjct: 642 AERGDAEALKQLGDIYEKENALEAVKWYKMAIEQGNASASFNLGLIYEYGKPGIPKNKAE 701
Query: 220 AARWYLRAAEGGYVRAMYN 238
A +WY +AAE G A N
Sbjct: 702 AIKWYRKAAEQGSETAQKN 720
>gi|409249912|ref|YP_006885727.1| Protein sel-1 homolog 1 Suppressor of lin-12-like protein 1;
Sel-1L; Flags: Precursor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|320085740|emb|CBY95518.1| Protein sel-1 homolog 1 Suppressor of lin-12-like protein 1;
Sel-1L; Flags: Precursor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FTPAQ 423
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPSSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|167553939|ref|ZP_02347682.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205321748|gb|EDZ09587.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FTPAQ 423
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|298159968|gb|EFI01006.1| hypothetical protein PSA3335_0918 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 513
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 48/217 (22%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE------------------ 149
G++++ G+GVRKN KA +S L A+RG LA G+ + E
Sbjct: 81 GRQYEEGKGVRKNPVKAFESMLAAASRGMALAQYKVGVFFEEGFGVSVDLSKAAQYYKAA 140
Query: 150 ---------------------MDKKE-AAISLYRQAAVLGDPAGQFNLGISYL------- 180
+ K E +AI + AA GD +LG++Y+
Sbjct: 141 AEQGLHAAQSSYALMLRDGLGVKKDEVSAIGFMQSAANGGDATALNSLGVAYIIGSGVSR 200
Query: 181 -QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+ V+LL A+ G AQ LA G GV+ + +EA +WY ++A G A
Sbjct: 201 DAVKGVQLLKLAAEKGDAIAQRNLAKSFSDGTGVEKDEREAFKWYRKSAVGNDKVAQLAL 260
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
Y +G G+ ++ A W KR+A G+ AQ + G
Sbjct: 261 GQSYEYGSGVEQDYKNALVWYKRSASTGYAPAQYKIG 297
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 14/175 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGS-TLAMVDAGLMYW--EMDKKEA--AISLYRQAAV 165
+ G GV+K+ A+ F++ AA G A+ G+ Y ++A + L + AA
Sbjct: 156 LRDGLGVKKDEVSAI-GFMQSAANGGDATALNSLGVAYIIGSGVSRDAVKGVQLLKLAAE 214
Query: 166 LGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD Q NL G+ + EA K ++++ AQ L G GV+ +
Sbjct: 215 KGDAIAQRNLAKSFSDGTGVEKDEREAFKWYRKSAVGNDKVAQLALGQSYEYGSGVEQDY 274
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ A WY R+A GY A Y Y+FG+G+ +++AR W++ AA G AQ
Sbjct: 275 KNALVWYKRSASTGYAPAQYKIGYFYNFGKGVAADYKEARYWLRLAATQGLAVAQ 329
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A L G + G GV ++ K + A +G +A + + E D++E
Sbjct: 181 DATALNSLGVAYIIGSGVSRDAVKGVQLLKLAAEKGDAIAQRNLAKSFSDGTGVEKDERE 240
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALC 206
A YR++AV D Q LG SY V+ Y+ ++ G+ AQY++
Sbjct: 241 A-FKWYRKSAVGNDKVAQLALGQSYEYGSGVEQDYKNALVWYKRSASTGYAPAQYKIGYF 299
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
+ G+GV + +EA W AA G A + + + G+G + + A KW + AA
Sbjct: 300 YNFGKGVAADYKEARYWLRLAATQGLAVAQADLASLFELGQGGAVDNAAAAKWYRLAAAQ 359
Query: 267 GHGKAQ------LEHGLGLFTEGEMMKAVVYL-ELATRAGETAADHVKNVILQQLSATSR 319
+AQ L+ G G+ E + +A++YL LA+ A + + N+ L S+
Sbjct: 360 NMPRAQYQLAVMLKEGRGV--EIDYAEALLYLRSLASNNVSYAENELGNMYKNGL-GVSQ 416
Query: 320 DRAMLVVDSWRAM 332
D V W+A+
Sbjct: 417 DYLAAVDWYWKAV 429
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISL 159
L G+ +++G GV ++ AL + + A+ G A G Y D KEA L
Sbjct: 258 LALGQSYEYGSGVEQDYKNALVWYKRSASTGYAPAQYKIGYFYNFGKGVAADYKEARYWL 317
Query: 160 YRQAAVLG------DPAGQFNLGIS-YLQEEAVKLLYQASIAGHV-RAQYQLALCLHRGR 211
R AA G D A F LG + A Y+ + A ++ RAQYQLA+ L GR
Sbjct: 318 -RLAATQGLAVAQADLASLFELGQGGAVDNAAAAKWYRLAAAQNMPRAQYQLAVMLKEGR 376
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAAD 265
GV+ + E A YLR+ V N Y G G+ + A W +A +
Sbjct: 377 GVEIDYAE-ALLYLRSLASNNVSYAENELGNMYKNGLGVSQDYLAAVDWYWKAVN 430
>gi|396082401|gb|AFN84010.1| Sel1 repeat-containing protein [Encephalitozoon romaleae SJ-2008]
Length = 588
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G F G GV KN + A++ F + + + A+ + G Y E E A +Y+ +
Sbjct: 174 GYCFLKGFGVEKNEEIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNFFKAFEMYKLS 233
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
+ + + Q LG Y + ++A + ++++ G+ Q LA C +G G
Sbjct: 234 SKMENSYAQNALGNCYEEGKGVNRDLQKAFEFYKKSALQGYPSGQCNLAFCYQKGIGTKK 293
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA---- 271
LQ+A WY RAA G RA +N CY G G P +A W K +A + +
Sbjct: 294 CLQKAFEWYKRAAVQGLSRAKHNIGYCYQNGLGTPQCMSKAIYWYKESASESNKHSIHAL 353
Query: 272 --QLEHGLGL----------FTEGE---MMKAVVYLELATRAG 299
+HG G+ F EG +A++ L L R+G
Sbjct: 354 GVCYQHGYGVSRDERLAVRYFNEGAKAGFDEAIISLALCYRSG 396
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 14/187 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM--DKK--EAAISLYRQA 163
G ++ G+GV ++L KA + + K A +G + Y + KK + A Y++A
Sbjct: 246 GNCYEEGKGVNRDLQKAFEFYKKSALQGYPSGQCNLAFCYQKGIGTKKCLQKAFEWYKRA 305
Query: 164 AVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
AV G + N+G Y +A+ +++ + + + L +C G GV
Sbjct: 306 AVQGLSRAKHNIGYCYQNGLGTPQCMSKAIYWYKESASESNKHSIHALGVCYQHGYGVSR 365
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ + A R++ A+ G+ A+ + +LCY G G+ +S ++ MKRAA+ + AQ +
Sbjct: 366 DERLAVRYFNEGAKAGFDEAIISLALCYRSGTGVRISPEKSFSLMKRAAEMNNASAQ--N 423
Query: 276 GLGLFTE 282
LG + E
Sbjct: 424 TLGYYYE 430
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ G GVR + +K+ + A + A G Y E + AI Y +A
Sbjct: 393 YRSGTGVRISPEKSFSLMKRAAEMNNASAQNTLGYYYEEGYGTLKNIREAIRWYEMSAKQ 452
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
+ FNL Y ++ V LL+++ G+ RA L C +G GV+ N +
Sbjct: 453 DNSWALFNLSSLYFNGVHIPPDEKLGVSLLFRSRDLGNPRAANTLGYCFEKGIGVEKNPK 512
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
A Y +A GY +A YN CY G G + +A + +++ G
Sbjct: 513 LAFEHYTQAFINGYSKAGYNLGRCYENGIGTGIDLDKALYYFYKSSSVG 561
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 30/178 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++HG GV ++ A+ F +GA G A++ L Y
Sbjct: 354 GVCYQHGYGVSRDERLAVRYFNEGAKAGFDEAIISLALCY-------------------- 393
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ G+ E++ L+ +A+ + AQ L G G N++EA RWY +
Sbjct: 394 ----RSGTGVRISPEKSFSLMKRAAEMNNASAQNTLGYYYEEGYGTLKNIREAIRWYEMS 449
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 279
A+ A++N S Y G +P + + R+ D G+ +A E G+G+
Sbjct: 450 AKQDNSWALFNLSSLYFNGVHIPPDEKLGVSLLFRSRDLGNPRAANTLGYCFEKGIGV 507
>gi|161613749|ref|YP_001587714.1| hypothetical protein SPAB_01474 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161363113|gb|ABX66881.1| hypothetical protein SPAB_01474 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 509
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FTPAQ 423
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|288573899|ref|ZP_06392256.1| Sel1 domain protein repeat-containing protein [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569640|gb|EFC91197.1| Sel1 domain protein repeat-containing protein [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 854
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 93/219 (42%), Gaps = 41/219 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---------------- 151
G+ GRG+ K+ KA++ K A G A D G++ + D
Sbjct: 174 GRLLSLGRGIEKDEGKAVELLRKAAEGGHIYAQHDLGILLGKSDDPKLVEEADKWLEKAA 233
Query: 152 -------------------KKEAAISLYRQAAVLGDPAGQFNLGISYLQE-----EAVKL 187
++E A + A+ G+P Q+ LG Q+ EA
Sbjct: 234 KEGYDDSQLSYGAFLLRNGREEEAKDWLKMASDRGNPEAQYLLGQLCRQQGGSFKEAANW 293
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
A+ GH AQY LA RG GV+ + +A WY RAAE G A YN S+ Y G
Sbjct: 294 FGLAARQGHGPAQYALATLYERGIGVEKDPTLSALWYRRAAEQGIPEAQYNLSVIYRKGS 353
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM 286
LP ++ W+K+AA+ G +AQ G L+ EG+ +
Sbjct: 354 SLPKDLGKSLLWLKKAAELGLPEAQYSLGT-LYREGDEI 391
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAIS 158
+LR G + G+ V + +A+ K A +GS A G MY + D AA+S
Sbjct: 593 AMLRLGLAYDEGKLVAPDKMEAVKWIRKAAEQGSDKAQFTLGAMYLKGDGLVKSHNAAMS 652
Query: 159 LYRQAAVLGDPAGQFNLGI-------SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+ ++A G+ Q+NLG+ L+ A+ + +A+ G+ AQ +L + G
Sbjct: 653 WFCESAKQGNLQAQYNLGLCLWNSKDEELRSSAIMWMERAAQGGYAPAQCELGIRYITGE 712
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAADCGHGK 270
G+ + A RW+ +AE GYV A YN ++ Y +G L A W RAA G+
Sbjct: 713 GLPQSDPAALRWFSLSAEQGYVPAQYNLAVLYLYGGPYLSPDESSAFHWFSRAAKEGYRD 772
Query: 271 AQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHV 306
AQ G L+ G ++ A +L +A G A V
Sbjct: 773 AQFYLGC-LYERGNAVSRDVKAAKTWLTMAMEGGSAEAREV 812
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA LG P Q++LG Y + +A +L +AS G+ +Q L L RG G
Sbjct: 367 KKAAELGLPEAQYSLGTLYREGDEIPRDLSKAAELFRKASNRGNAESQCALGLMYLRGAG 426
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + +EA + + E GY A YN L YS GE +P +A +W ++AA GH AQ
Sbjct: 427 VPRDEKEAMEHLIASGEAGYPSAQYNLGLLYSRGEAVPRDTAEAARWFRKAALQGHPGAQ 486
Query: 273 LEHGL 277
G+
Sbjct: 487 CNLGV 491
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 13/227 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEAAISLY--RQA 163
G + G GV ++ KA+ + + A GS + GLM+ E K++ + Y +A
Sbjct: 66 GYLYDQGNGVSQDKGKAMKWYKEAAKGGSADGQYNLGLMFRDGEGTPKDSYKATYWLEKA 125
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q LG+ + E+ K A+ G++ Y L L GRG++
Sbjct: 126 ASQGHQTAQIALGMMAMNPDEGEPRYEDGAKWFAMAAEQGNISGCYNLGRLLSLGRGIEK 185
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +A +AAEGG++ A ++ + + P +A KW+++AA G+ +QL +
Sbjct: 186 DEGKAVELLRKAAEGGHIYAQHDLGILLGKSDD-PKLVEEADKWLEKAAKEGYDDSQLSY 244
Query: 276 GLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
G L G +A +L++A+ G A ++ + +Q + ++ A
Sbjct: 245 GAFLLRNGREEEAKDWLKMASDRGNPEAQYLLGQLCRQQGGSFKEAA 291
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G F+ G G K+ KA K A++G A + G+M D+ E + A
Sbjct: 102 GLMFRDGEGTPKDSYKATYWLEKAASQGHQTAQIALGMMAMNPDEGEPRYEDGAKWFAMA 161
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ +G +NL GI + +AV+LL +A+ GH+ AQ+ L + L G+ D
Sbjct: 162 AEQGNISGCYNLGRLLSLGRGIEKDEGKAVELLRKAAEGGHIYAQHDLGILL--GKSDDP 219
Query: 216 NL-QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR--QARKWMKRAADCGHGKAQ 272
L +EA +W +AA+ GY + S+G L + R +A+ W+K A+D G+ +AQ
Sbjct: 220 KLVEEADKWLEKAAKEGYDDSQ------LSYGAFLLRNGREEEAKDWLKMASDRGNPEAQ 273
Query: 273 LEHG-LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
G L G +A + LA R G A + + ++ +D +
Sbjct: 274 YLLGQLCRQQGGSFKEAANWFGLAARQGHGPAQYALATLYERGIGVEKDPTL 325
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 14/175 (8%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQF 173
K A L A +G LA G +Y + + K A+ Y++AA G GQ+
Sbjct: 40 EKRYKDAYTHLLPEAEKGDPLAQCTLGYLYDQGNGVSQDKGKAMKWYKEAAKGGSADGQY 99
Query: 174 NLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
NLG+ + E A L +A+ GH AQ L + + ++ A+W+
Sbjct: 100 NLGLMFRDGEGTPKDSYKATYWLEKAASQGHQTAQIALGMMAMNPDEGEPRYEDGAKWFA 159
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
AAE G + YN S G G+ +A + +++AA+ GH AQ H LG+
Sbjct: 160 MAAEQGNISGCYNLGRLLSLGRGIEKDEGKAVELLRKAAEGGHIYAQ--HDLGIL 212
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G + ++L KA + F K + RG+ + GLMY D+KEA L
Sbjct: 382 GTLYREGDEIPRDLSKAAELFRKASNRGNAESQCALGLMYLRGAGVPRDEKEAMEHLIAS 441
Query: 163 AAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVD 214
G P+ Q+NLG+ Y + EAV + +A++ GH AQ L + RG GV
Sbjct: 442 GEA-GYPSAQYNLGLLYSRGEAVPRDTAEAARWFRKAALQGHPGAQCNLGVQYERGDGVA 500
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
AA W +AA+ G A+YN +L Y G+G+ + +A + +++A + G
Sbjct: 501 LVPSAAAAWLGKAAKQGEPYALYNLALLYQKGKGVERNRERAVELLEKAIEAG 553
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 27/196 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N ++A++ K GS A G ++ A G P
Sbjct: 529 YQKGKGVERNRERAVELLEKAIEAGSWDAPYSLGCLF---------------AGDYGGPV 573
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
+ + A+ LYQA+ G RA +L L G+ V + EA +W +AAE
Sbjct: 574 REIS---------ALYRLYQAASIGDRRAMLRLGLAYDEGKLVAPDKMEAVKWIRKAAEQ 624
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF-TEGEMMK-- 287
G +A + Y G+GL SH A W +A G+ +AQ GL L+ ++ E ++
Sbjct: 625 GSDKAQFTLGAMYLKGDGLVKSHNAAMSWFCESAKQGNLQAQYNLGLCLWNSKDEELRSS 684
Query: 288 AVVYLELATRAGETAA 303
A++++E A + G A
Sbjct: 685 AIMWMERAAQGGYAPA 700
>gi|200390424|ref|ZP_03217035.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|199602869|gb|EDZ01415.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
Length = 509
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FTPAQ 423
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|237746263|ref|ZP_04576743.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377614|gb|EEO27705.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 341
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 118 RKNLDKALDSFLKGAARGSTLA------MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAG 171
K +AL K A G+ A M D G +M +K A+ Y ++A G+P
Sbjct: 38 NKEFKEALPLIEKEAKSGNAEAQFILAKMYDFGEGVNKMPQK--ALYWYEKSAEQGNPKA 95
Query: 172 QFNLGISYLQEEAVK-------LLYQASI-AGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
Q NL Y E V +LY S G AQ+ L L +G+G+D + ++A W
Sbjct: 96 QNNLAYMYSNGEGVNKSIKKAFILYSLSANQGLSAAQFNLGLMYSKGKGIDQDYKKALFW 155
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
Y ++AE Y +A + + Y GEG+P + +A +W K+AA G+ ++ G + E
Sbjct: 156 YKKSAEQNYTKAFHALGVAYQNGEGVPANRDEAIRWYKKAAAQGYARSMANLGSLYYPE 214
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS- 158
EA +L K + G GV K KAL + K A +G+ A + MY + +I
Sbjct: 58 EAQFIL--AKMYDFGEGVNKMPQKALYWYEKSAEQGNPKAQNNLAYMYSNGEGVNKSIKK 115
Query: 159 ---LYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCL 207
LY +A G A QFNLG+ Y + + + Y+ ++ + +A + L +
Sbjct: 116 AFILYSLSANQGLSAAQFNLGLMYSKGKGIDQDYKKALFWYKKSAEQNYTKAFHALGVAY 175
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADC 266
G GV N EA RWY +AA GY R+M N SL Y G S +A KW A D
Sbjct: 176 QNGEGVPANRDEAIRWYKKAAAQGYARSMANLGSLYYPEDAGDLESWDEAYKWYSMAIDH 235
Query: 267 GHGKAQLEHGLGL 279
G K GLGL
Sbjct: 236 GDRK-NAPLGLGL 247
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+EA+ L+ + + +G+ AQ+ LA G GV+ Q+A WY ++AE G +A N +
Sbjct: 42 KEALPLIEKEAKSGNAEAQFILAKMYDFGEGVNKMPQKALYWYEKSAEQGNPKAQNNLAY 101
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELAT 296
YS GEG+ S ++A +A+ G AQ GL ++++G + KA+ + + +
Sbjct: 102 MYSNGEGVNKSIKKAFILYSLSANQGLSAAQFNLGL-MYSKGKGIDQDYKKALFWYKKSA 160
Query: 297 RAGETAADHVKNVILQQLSAT--SRDRAM 323
T A H V Q +RD A+
Sbjct: 161 EQNYTKAFHALGVAYQNGEGVPANRDEAI 189
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 77/186 (41%), Gaps = 17/186 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G+G+ ++ KAL + K A + T A G+ Y + ++ AI Y++A
Sbjct: 136 GLMYSKGKGIDQDYKKALFWYKKSAEQNYTKAFHALGVAYQNGEGVPANRDEAIRWYKKA 195
Query: 164 AVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHR--GRG- 212
A G NLG Y E+A L Y +I R L L L G G
Sbjct: 196 AAQGYARSMANLGSLYYPEDAGDLESWDEAYKWYSMAIDHGDRKNAPLGLGLIHLFGSGR 255
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA- 271
+ +A + AAE G Y + +G G P +A + K+AA+ G A
Sbjct: 256 YPVDNAKAYSLFTLAAENGRADGWYWLGVMEEYGFGRPQDEERAMELYKKAANAGVEPAI 315
Query: 272 -QLEHG 276
+LEHG
Sbjct: 316 NRLEHG 321
>gi|417373025|ref|ZP_12143157.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353603633|gb|EHC58668.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
Length = 509
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FTPAQ 423
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + G+ V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGQYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L G+ V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGQYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADQVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|207856733|ref|YP_002243384.1| hypothetical protein SEN1279 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|206708536|emb|CAR32857.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 491
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 258 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 317
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 318 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 377
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 378 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 434
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 281 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 340
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 341 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 400
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVI 310
AQL G ++ G + +A ++ +A+ E + D +I
Sbjct: 401 FTPAQLALGE-IYAHGRQGVPKDNKQAYIWYYMASIYTEKSKDDCSALI 448
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 40 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 99
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 100 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 159
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 160 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 217
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 195 GVAYFYGEGVPQDYRQAVYWLNEGIPSSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 251
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 252 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 311
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 312 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 371
Query: 275 HGLGLFT 281
G+ T
Sbjct: 372 LGVAYST 378
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +
Sbjct: 25 EQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 84
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 85 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 136
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 21 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 80
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 81 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 140
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 141 D--AGVVRGQGSASS 153
>gi|168462767|ref|ZP_02696698.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|418760455|ref|ZP_13316610.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418765884|ref|ZP_13321965.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418770141|ref|ZP_13326165.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418777363|ref|ZP_13333292.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418779045|ref|ZP_13334952.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418785833|ref|ZP_13341659.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418801372|ref|ZP_13357008.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419788234|ref|ZP_14313925.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|195634437|gb|EDX52789.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|392617748|gb|EIX00163.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392737937|gb|EIZ95088.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392739637|gb|EIZ96770.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392742760|gb|EIZ99844.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392743822|gb|EJA00884.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392750705|gb|EJA07665.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392754495|gb|EJA11412.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392780336|gb|EJA36991.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
Length = 509
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFAPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q EAV YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FAPAQ 423
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + G+ V+ + A+ K +GS L+ G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGQYVKPDYKLAIKWLEKAGKQGSDLSYFIIGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYDPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G V
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L G+ V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGQYVKPDYKLAIKWLEKAGKQGSDLSYFIIGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 90/240 (37%), Gaps = 29/240 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYDPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G GV + ++A W G Y + L + + P ++ W ++ A
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPG--HIPLNALYDKAHPADQVHSQTWYRKTA 271
Query: 265 DCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVILQQLSATSRD 320
K Q G+ + ++K A+ + A G A V+ Q A S+D
Sbjct: 272 QRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQD 331
>gi|322379183|ref|ZP_08053575.1| cysteine-rich protein H [Helicobacter suis HS1]
gi|322379989|ref|ZP_08054257.1| cysteine-rich protein H [Helicobacter suis HS5]
gi|321147578|gb|EFX42210.1| cysteine-rich protein H [Helicobacter suis HS5]
gi|321148385|gb|EFX42893.1| cysteine-rich protein H [Helicobacter suis HS1]
Length = 165
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 32/165 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+G+ KN KAL + K A GS LA + +MY + + + A+ Y++A
Sbjct: 11 GVMYHDGQGIGKNYQKALQYYQKAANMGSALAYNNLAIMYHDGQGVVKDYQKAMEYYKKA 70
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
A +G + FNLG+ Y H G+ V + Q+A R+
Sbjct: 71 ADMGLASAYFNLGLMY----------------------------HNGQSVGKDYQKALRY 102
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
Y +AA GG A +N ++ Y+ G+G+ ++A++++K+A G+
Sbjct: 103 YRKAANGGVATAYHNLAIMYAKGQGVQKDLQKAKEYVKKACKIGY 147
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G + L + H G+G+ N Q+A ++Y +AA G A N ++ Y G+G+ ++
Sbjct: 2 GSAEGYFSLGVMYHDGQGIGKNYQKALQYYQKAANMGSALAYNNLAIMYHDGQGVVKDYQ 61
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNV 309
+A ++ K+AAD G A GL ++ G+ + KA+ Y A G A H +
Sbjct: 62 KAMEYYKKAADMGLASAYFNLGL-MYHNGQSVGKDYQKALRYYRKAANGGVATAYHNLAI 120
Query: 310 ILQQLSATSRD 320
+ + +D
Sbjct: 121 MYAKGQGVQKD 131
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNL 217
+G G F+LG+ Y + + YQ A+ G A LA+ H G+GV +
Sbjct: 1 MGSAEGYFSLGVMYHDGQGIGKNYQKALQYYQKAANMGSALAYNNLAIMYHDGQGVVKDY 60
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
Q+A +Y +AA+ G A +N L Y G+ + +++A ++ ++AA+ G
Sbjct: 61 QKAMEYYKKAADMGLASAYFNLGLMYHNGQSVGKDYQKALRYYRKAANGG 110
>gi|401406890|ref|XP_003882894.1| putative Sel1 repeat domain-containing protein [Neospora caninum
Liverpool]
gi|325117310|emb|CBZ52862.1| putative Sel1 repeat domain-containing protein [Neospora caninum
Liverpool]
Length = 386
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 80 QLRAASLVCKSW-----NDA-LRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAA 133
++ AA L CK+ DA L A L G + + G GV NL +A + + +
Sbjct: 10 EVAAARLECKTLRRELSKDADLENKERAAQLCTEGHKNRFGHGVPANLLRAFQLYTEAGS 69
Query: 134 RGSTLAMVDAGLMYWE--------MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ---- 181
G A+ AG++ E D ++L +AA LG Q +G + Q
Sbjct: 70 LGDPDALTCAGILLEEGLVDPDIDYDNVVKDLNLLGRAAKLGHADAQVAVGYACEQGRSG 129
Query: 182 -----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
++A+ +A+ G A LA + GRG + ++AA + +AA GG A+
Sbjct: 130 WMQDHQQAIFWYTKAAEQGSATATNNLASLFYHGRGCQQDFEKAAELFKKAAAGGNTNAV 189
Query: 237 YNTSLCYSFGEGLPLSHR-QARKWMKRAADCGHGKAQLEHGLGLF 280
YN +CY FG G+ +A + +RAA GH KA GL LF
Sbjct: 190 YNLGVCYEFGRGVAAEDSDKALQLYQRAAQAGHVKAACALGLLLF 234
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
F HGRG +++ +KA + F K AA G+T A+ + G+ Y
Sbjct: 160 FYHGRGCQQDFEKAAELFKKAAAGGNTNAVYNLGVCY----------------------- 196
Query: 171 GQFNLGISYLQEEAVKLLYQ-ASIAGHVRAQYQLALCLHR-----GRGVDFNLQEAARWY 224
+F G++ + LYQ A+ AGHV+A L L L + G+ VD + AA+W
Sbjct: 197 -EFGRGVAAEDSDKALQLYQRAAQAGHVKAACALGLLLFKLNVAAGKPVDAYIG-AAKWL 254
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
AAE V A + + G G+ ++QA ++ + AA
Sbjct: 255 RVAAEHKDVEACFGLGQLFEAGLGVSKDYQQALEYYRTAA 294
>gi|168260019|ref|ZP_02681992.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205350911|gb|EDZ37542.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 509
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FTPAQ 423
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS L+ G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDLSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G + T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGISGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDLSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDLSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGISGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|417333430|ref|ZP_12116978.1| tetratricopeptide repeat family protein, partial [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
gi|353578450|gb|EHC40284.1| tetratricopeptide repeat family protein, partial [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
Length = 356
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 123 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 182
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 183 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 242
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 243 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 299
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 146 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 205
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 206 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 265
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 266 FTPAQLALG 274
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 60 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 116
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 117 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 176
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 177 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 236
Query: 275 HGLGLFT 281
G+ T
Sbjct: 237 LGVAYST 243
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ++L + G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA
Sbjct: 19 AQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVY 78
Query: 259 WM 260
W+
Sbjct: 79 WL 80
>gi|239908141|ref|YP_002954882.1| hypothetical protein DMR_35050 [Desulfovibrio magneticus RS-1]
gi|239798007|dbj|BAH76996.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 705
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 94/197 (47%), Gaps = 21/197 (10%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE---------EAVKLLYQASIAGHVRAQYQLALC 206
A++ YR+AA GD F LG S L + EA K QA+ G RAQ+ L L
Sbjct: 463 AVTYYREAANAGDLEAGFALG-SLLSKGLAGEPDFAEARKWYEQAAAHGDARAQFNLGLM 521
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G+G N EA RW L AA+GG A N + G G P ++A +W + AA
Sbjct: 522 YLTGKGGPVNDAEALRWMLEAAKGGDAHARSNVATMTLTGRGTPSDPQEAFRWYRLAAGQ 581
Query: 267 GHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRA-GETA----ADHVKNVILQQLSA 316
G+ +AQ G + EG ++ A+ +L LA+RA G A A K V+ ++L+
Sbjct: 582 GYAQAQAMLA-GFYYEGRVVPRDFESALFWLTLASRAPGGDALLQRAARAKAVLEKRLTP 640
Query: 317 TSRDRAMLVVDSWRAMP 333
+R + +++ P
Sbjct: 641 DQLERVAARLTAYKPAP 657
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+AV +A+ AG + A + L L +G + + EA +WY +AA G RA +N L
Sbjct: 462 KAVTYYREAANAGDLEAGFALGSLLSKGLAGEPDFAEARKWYEQAAAHGDARAQFNLGLM 521
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
Y G+G P++ +A +WM AA G A+
Sbjct: 522 YLTGKGGPVNDAEALRWMLEAAKGGDAHAR 551
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 51/131 (38%), Gaps = 36/131 (27%)
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG--------------- 231
LL QA+ AG +A Y +AL G+GV N EA RW +AAE G
Sbjct: 394 LLSQAAWAGQPQAMYAMALLHLSGQGVSGNPAEAFRWCAKAAEAGVPEAKGLLAALSEEE 453
Query: 232 ------------YVRAMYNTS-LCYSFGEGLPLSH--------RQARKWMKRAADCGHGK 270
Y R N L F G LS +ARKW ++AA G +
Sbjct: 454 FPSAANLAKAVTYYREAANAGDLEAGFALGSLLSKGLAGEPDFAEARKWYEQAAAHGDAR 513
Query: 271 AQLEHGLGLFT 281
AQ GL T
Sbjct: 514 AQFNLGLMYLT 524
>gi|291288401|ref|YP_003505217.1| Sel1 domain-containing protein repeat-containing protein
[Denitrovibrio acetiphilus DSM 12809]
gi|290885561|gb|ADD69261.1| Sel1 domain protein repeat-containing protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 216
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-----MYWEMDKKEAAISLYRQAAV 165
++HG GV +N+ AL +++ A GS A G +Y+E K+A + Y++AA
Sbjct: 48 YEHGEGVPQNIKMALRMYIRAAKLGSAEAKFLLGSFCSSGIYFEKSTKKAFV-FYKEAAD 106
Query: 166 LGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G P + G+ YL E+A + GH Q +L L GRG +
Sbjct: 107 QGMPDAIYKTGLFYLFGYLGVKNLEQAFNYFEMGANLGHPPCQNRLGLLYAGGRGTLKSD 166
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+A WY +AAE G+ AMYN S G G +++A KW AA
Sbjct: 167 DDAVYWYRKAAEQGHGEAMYNLGCMLSTGRGGKADNKEALKWFNLAA 213
>gi|16765101|ref|NP_460716.1| hypothetical protein STM1760 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167993199|ref|ZP_02574294.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168241338|ref|ZP_02666270.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194448382|ref|YP_002045802.1| hypothetical protein SeHA_C1954 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197264161|ref|ZP_03164235.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|374980768|ref|ZP_09722098.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|378450327|ref|YP_005237686.1| hypothetical protein STM14_2127 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378984320|ref|YP_005247475.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378989100|ref|YP_005252264.1| hypothetical protein STMUK_1732 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379700930|ref|YP_005242658.1| hypothetical protein STM474_1776 [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383496451|ref|YP_005397140.1| hypothetical protein UMN798_1851 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386591594|ref|YP_006087994.1| hypothetical protein SU5_02364 [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|419730584|ref|ZP_14257530.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419732270|ref|ZP_14259176.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419745364|ref|ZP_14272002.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419748417|ref|ZP_14274913.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421571928|ref|ZP_16017595.1| hypothetical protein CFSAN00322_17075 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421577790|ref|ZP_16023375.1| hypothetical protein CFSAN00326_00245 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421583093|ref|ZP_16028622.1| hypothetical protein CFSAN00328_03920 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422025934|ref|ZP_16372354.1| hypothetical protein B571_08831 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422030969|ref|ZP_16377153.1| hypothetical protein B572_08911 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427549997|ref|ZP_18927662.1| hypothetical protein B576_08923 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427565852|ref|ZP_18932384.1| hypothetical protein B577_08384 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427585769|ref|ZP_18937167.1| hypothetical protein B573_08335 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427609032|ref|ZP_18942031.1| hypothetical protein B574_08619 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427633346|ref|ZP_18946928.1| hypothetical protein B575_08934 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427655987|ref|ZP_18951693.1| hypothetical protein B578_08599 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427661129|ref|ZP_18956602.1| hypothetical protein B579_09224 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427668330|ref|ZP_18961403.1| hypothetical protein B580_08927 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|16420289|gb|AAL20675.1| putative TPR repeat protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194406686|gb|ACF66905.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197242416|gb|EDY25036.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205328697|gb|EDZ15461.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205339425|gb|EDZ26189.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|267993705|gb|ACY88590.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|312912748|dbj|BAJ36722.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321224388|gb|EFX49451.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323130029|gb|ADX17459.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332988647|gb|AEF07630.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|380463272|gb|AFD58675.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381294592|gb|EIC35731.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381303119|gb|EIC44148.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381306080|gb|EIC46973.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381314070|gb|EIC54845.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383798638|gb|AFH45720.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|402519008|gb|EJW26373.1| hypothetical protein CFSAN00322_17075 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402526497|gb|EJW33772.1| hypothetical protein CFSAN00326_00245 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402532559|gb|EJW39751.1| hypothetical protein CFSAN00328_03920 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414018947|gb|EKT02576.1| hypothetical protein B571_08831 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414019430|gb|EKT03044.1| hypothetical protein B576_08923 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414021443|gb|EKT04991.1| hypothetical protein B572_08911 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414033156|gb|EKT16124.1| hypothetical protein B577_08384 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414035019|gb|EKT17921.1| hypothetical protein B573_08335 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414038008|gb|EKT20739.1| hypothetical protein B574_08619 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414047847|gb|EKT30110.1| hypothetical protein B578_08599 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414049325|gb|EKT31540.1| hypothetical protein B575_08934 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414053755|gb|EKT35730.1| hypothetical protein B579_09224 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414059850|gb|EKT41393.1| hypothetical protein B580_08927 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
Length = 509
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FTPAQ 423
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|393779651|ref|ZP_10367888.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392609846|gb|EIW92644.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 811
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+SY Q+ VK L + + G V+AQ +LA +G+GV + QEA W + AE G + A
Sbjct: 15 LSYGQDANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQ 74
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y + CY G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 75 YQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 123 KALDSFLKGAARGSTLA---MVDAGLMYWEMDKKEA-AISLYRQAAVLGDPAGQFNLGIS 178
+A+ + A +G+T A + DA L ++K EA AI + +AA GD + LG
Sbjct: 198 EAIKRLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKAAKGGDAEALYQLGNF 257
Query: 179 YLQ----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
Y ++A+ QA+ G+ AQ QLALC + G G + + +EA W L++
Sbjct: 258 YFYGNSPLIGKYYKKAINYYTQAANKGNAVAQAQLALCFYNGIGTNASPKEAFSWILKSV 317
Query: 229 EGGYV-RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM-- 285
+A N +CY+ G G S+ QA ++ ++AA+ G AQ G L EG++
Sbjct: 318 NTNPTPKAQNNLGVCYAVGIGAHPSNAQALEFFQKAAEAGDVTAQYNLGNILLQEGQLDV 377
Query: 286 MKAVVYLE 293
K YLE
Sbjct: 378 KKGFDYLE 385
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ + QY LA C + G G+D + ++AA +Y +A Y A + CY GEG+ S +
Sbjct: 725 YAQGQYNLANCYYNGNGIDRSYEKAANYYKLSARKDYAPAQFRLGHCYYHGEGIEQSDSR 784
Query: 256 ARKWMKRAADCGHGKA 271
A W ++A D G KA
Sbjct: 785 AADWFEQACDNGEKKA 800
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q L +Y + + V+ YQ ++ G + AQYQLA C G+GV + Q
Sbjct: 33 GDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQYQLAQCYFNGKGVPKSPQ 92
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 274
+ W + A+ G A +LCY G+G+ S + +++ A+ + + QL+
Sbjct: 93 KGVEWLTKVADAGNPEAQRELALCYRDGKGVEQSKEKYYALIEKHAEKENPEVQLDLAKA 152
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAAD 304
+ G ++ KA + E A++ G + A+
Sbjct: 153 YHSGEGVTKDVNKAKYWAEQASKNGNSEAE 182
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 88/232 (37%), Gaps = 67/232 (28%)
Query: 100 EAMVLLRWGKRFKHGRG--VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDK 152
+A L + G + +G + K KA++ + + A +G+ +A L ++
Sbjct: 247 DAEALYQLGNFYFYGNSPLIGKYYKKAINYYTQAANKGNAVAQAQLALCFYNGIGTNASP 306
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLA 204
KEA + + P Q NLG+ Y +A++ +A+ AG V AQY L
Sbjct: 307 KEAFSWILKSVNTNPTPKAQNNLGVCYAVGIGAHPSNAQALEFFQKAAEAGDVTAQYNLG 366
Query: 205 -LCLHRG-----RGVDF----------------------------NLQEAARWYLRAA-- 228
+ L G +G D+ + + A +Y +A+
Sbjct: 367 NILLQEGQLDVKKGFDYLEKAAAANHLLALKKLGDLYFNGKYTNQSFERAFEYYTKASKQ 426
Query: 229 ----------------EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
E Y +YN S CY+ G+G+ S R+A KW +AA
Sbjct: 427 TPTPQKEMLDYFYQGQEEAYADVLYNLSQCYAEGKGVKKSMREASKWAVKAA 478
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLG 176
D + +K A +G A + Y++ +EA + L + A GD Q+ L
Sbjct: 20 DANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWL-EKVAETGDLNAQYQLA 78
Query: 177 ISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL--- 225
Y ++ V+ L + + AG+ AQ +LALC G+GV+ Q ++Y
Sbjct: 79 QCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVE---QSKEKYYALIE 135
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ AE + + Y GEG+ +A+ W ++A+ G+ +A++
Sbjct: 136 KHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEM 183
>gi|354594462|ref|ZP_09012501.1| hypothetical protein CIN_11970 [Commensalibacter intestini A911]
gi|353672138|gb|EHD13838.1| hypothetical protein CIN_11970 [Commensalibacter intestini A911]
Length = 236
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 14/137 (10%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLH 208
I+ Q A GD Q N+G+ Y + E V + +A+ G +AQY L L +
Sbjct: 31 IAALEQKASQGDVKAQLNVGLMYFRGEGVSEDGAKAFENFTKAAEQGDAQAQYILGLMYY 90
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
GRG+ + +A W+ ++AE G + A+ Y+ G G+P + +A KW +AAD G
Sbjct: 91 LGRGIPQDYTKAFEWFHKSAEQGNIDALVGIGYLYAEGRGVPQDYFEAIKWFSKAADQGD 150
Query: 269 GKAQL------EHGLGL 279
+AQL E+G G+
Sbjct: 151 AEAQLKLANMYENGQGV 167
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
Query: 132 AARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYL------- 180
A++G A ++ GLMY+ + A + +AA GD Q+ LG+ Y
Sbjct: 38 ASQGDVKAQLNVGLMYFRGEGVSEDGAKAFENFTKAAEQGDAQAQYILGLMYYLGRGIPQ 97
Query: 181 -QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+A + ++++ G++ A + GRGV + EA +W+ +AA+ G A
Sbjct: 98 DYTKAFEWFHKSAEQGNIDALVGIGYLYAEGRGVPQDYFEAIKWFSKAADQGDAEAQLKL 157
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
+ Y G+G+P + +A + +AA+ G+ A L G+G E
Sbjct: 158 ANMYENGQGVPQDYAKAIELYTQAANKGNAIAFL--GIGAIYE 198
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISL 159
L G + G GV ++ KA ++F K A +G A GLMY+ D +A
Sbjct: 47 LNVGLMYFRGEGVSEDGAKAFENFTKAAEQGDAQAQYILGLMYYLGRGIPQDYTKA-FEW 105
Query: 160 YRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+ ++A G+ +G Y + EA+K +A+ G AQ +LA G+
Sbjct: 106 FHKSAEQGNIDALVGIGYLYAEGRGVPQDYFEAIKWFSKAADQGDAEAQLKLANMYENGQ 165
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ-ARKWMKRA 263
GV + +A Y +AA G A Y G+ L ++ A+ + K+A
Sbjct: 166 GVPQDYAKAIELYTQAANKGNAIAFLGIGAIYEQGKKNILQDKEKAKVYYKQA 218
>gi|170591713|ref|XP_001900614.1| sel-1 [Brugia malayi]
gi|158591766|gb|EDP30369.1| sel-1, putative [Brugia malayi]
Length = 646
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 14/211 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N+D A F A GST A G MY + A +++AA G+
Sbjct: 269 GRGVEQNMDLASQYFSTAAQAGSTNAYAYLGKMYLDGTPATPQDNATAFQFFKKAADKGN 328
Query: 169 PAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P GQ L I Y+ + VK L A+ G V Q L RG GV + + A
Sbjct: 329 PVGQSGLAIMYMYGKGVKQDYIKAAKLFTLAAEQGWVDGQLNLGYLHFRGLGVKRDFKLA 388
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+++ A++ G+V A +N + ++ G G+P + A + K A+ G +L +
Sbjct: 389 IKYFQLASQSGHVNAYFNLAQIHATGTGVPRNCHTAVELYKNVAERGRWSERLMEAYASY 448
Query: 281 TEGEMMKAVV-YLELATRAGETAADHVKNVI 310
G + +A YL LA E A + +I
Sbjct: 449 RGGRVDEAAFKYLFLAELGYEPAQTNFAYII 479
>gi|419793622|ref|ZP_14319240.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392616548|gb|EIW98980.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
Length = 509
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFAPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q EAV YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FAPAQ 423
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + G+ V+ + A+ K +GS L+ G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGQYVKPDYKLAIKWLEKAGKQGSDLSYFIIGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEE--------AVKLLYQASI----AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + A++L +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALELYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYDPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----- 159
L G + +G GV ++ +A+ +G T + +Y DK A +
Sbjct: 210 LYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADQVHSQTW 266
Query: 160 YRQAAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGR 211
YR+ A Q+N G+ Y L++ + L + +A+ G AQ + + +G
Sbjct: 267 YRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGE 326
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
V + Q+A WY +AA G A + + +FG G+ S RQA W ++AA KA
Sbjct: 327 AVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKA 386
Query: 272 QLEHGLGLFT 281
Q + G+ T
Sbjct: 387 QYQLGVAYST 396
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L G+ V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGQYVKPDYKLAIKWLEKAGKQGSDLSYFIIGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LEL +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALELYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 29/240 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ LYR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALELYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYDPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G GV + ++A W G Y + L + + P ++ W ++ A
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPG--HIPLNALYDKAHPADQVHSQTWYRKTA 271
Query: 265 DCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVILQQLSATSRD 320
K Q G+ + ++K A+ + A G A V+ Q A S+D
Sbjct: 272 QRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQD 331
>gi|378699636|ref|YP_005181593.1| hypothetical protein SL1344_1688 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|301158284|emb|CBW17783.1| hypothetical secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
Length = 491
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 258 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 317
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 318 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 377
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 378 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 434
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 281 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 340
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 341 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 400
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVILQ 312
AQ G ++ G + +A ++ +A+ E + D +I +
Sbjct: 401 FTPAQSALGE-IYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALIAE 450
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 40 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 99
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 100 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 159
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 160 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 217
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 195 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 251
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 252 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 311
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 312 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 371
Query: 275 HGLGLFT 281
G+ T
Sbjct: 372 LGVAYST 378
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 25 EQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 84
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 85 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 136
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 21 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 80
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 81 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 140
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 141 D--AGVVRGQGSASS 153
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 76 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 135
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 136 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 195
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 196 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 255
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 256 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 314
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 315 QQALAWYRKAARQGLPAA 332
>gi|335423615|ref|ZP_08552636.1| TPR repeat, SEL1 subfamily protein [Salinisphaera shabanensis
E1L3A]
gi|334891440|gb|EGM29688.1| TPR repeat, SEL1 subfamily protein [Salinisphaera shabanensis
E1L3A]
Length = 406
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY-------LQEEAVKLLYQASIA 194
DA + Y + D + A L+ A GD QFNL + Y L E + +QA+
Sbjct: 34 DAIVAYQKGDY-DTAHDLWAPLAEAGDARAQFNLALLYGNGLGRTLDRETARRWFQAAAE 92
Query: 195 -GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
G+V+AQY LA L G GV ++ A WY +AA + A N +L Y G+G+P
Sbjct: 93 QGNVQAQYNLARMLQSGDGVQADVAAARGWYEKAARQDFAPAQNNLALMYLEGQGMPRDR 152
Query: 254 RQARKWMKRAADCGHGKAQLEHGLGL-FTEGEMMKAVVYLELATRAGETAADHVKNVILQ 312
+A +W RAA+ GL + E +M ++V L RAG + +++ IL
Sbjct: 153 ARAVRWFSRAAESSPEARNNLSGLAMRLPEARVMASLVNL----RAGPS----MQSRILD 204
Query: 313 QLS 315
Q+S
Sbjct: 205 QVS 207
>gi|197362243|ref|YP_002141880.1| hypothetical protein SSPA1039 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197093720|emb|CAR59193.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 491
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 258 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 317
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 318 LAWYRKAARQGLPAAQTHLGIMSAFGRDVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 377
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 378 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 434
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 281 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 340
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GR V + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 341 AFGRDVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 400
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVILQ 312
AQ G ++ G + +A ++ +A+ E + D +I +
Sbjct: 401 FTPAQSALGE-IYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALIAE 450
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 40 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 99
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 100 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 159
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 160 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 217
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 195 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLSALY---DKAHPADRVHSQTWYRK 251
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 252 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 311
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG + S RQA W ++AA KAQ +
Sbjct: 312 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRDVAQSDRQAIAWYRKAAKQDFAKAQYQ 371
Query: 275 HGLGLFT 281
G+ T
Sbjct: 372 LGVAYST 378
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +
Sbjct: 25 EQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 84
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 85 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 136
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 21 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 80
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 81 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 140
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 141 D--AGVVRGQGSASS 153
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 100/277 (36%), Gaps = 67/277 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 76 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 135
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 136 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 195
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 196 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLSALYDKAHPADRVHSQTWYRKTAQR 255
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 256 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 314
Query: 286 MKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
+A+ + A R G AA L +SA RD A
Sbjct: 315 QQALAWYRKAARQGLPAA----QTHLGIMSAFGRDVA 347
>gi|420150362|ref|ZP_14657522.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394752421|gb|EJF36123.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 811
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+SY Q+ VK L + + G V+AQ +LA +G+GV + QEA W + AE G + A
Sbjct: 15 LSYGQDANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQ 74
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y + CY G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 75 YQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q L +Y + + V+ YQ ++ G + AQYQLA C G+GV + Q
Sbjct: 33 GDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQYQLAQCYFNGKGVPKSPQ 92
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 274
+ W + A+ G A +LCY G+G+ S + + +++ A+ + + QL+
Sbjct: 93 KGVEWLTKVADAGNPEAQRELALCYRDGKGVEQSKEKYYRLIEKHAEKENSEVQLDLAKA 152
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAAD 304
+ G ++ KA + E A++ G + A+
Sbjct: 153 YHSGEGVTKDVNKAKYWAEQASKNGNSEAE 182
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ + QY LA C + G G+D + ++AA +Y +A Y A + CY GEG+ S +
Sbjct: 725 YAQGQYNLANCYYNGNGIDRSYEKAANYYKLSARKDYAPAQFRLGHCYYHGEGIEQSDSR 784
Query: 256 ARKWMKRAADCGHGKA 271
A W ++A D G KA
Sbjct: 785 AADWFEQACDNGEKKA 800
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 123 KALDSFLKGAARGSTLA---MVDAGLMYWEMDKKEA-AISLYRQAAVLGDPAGQFNLGIS 178
+A+ + A +G+T A + DA L ++K EA AI + +AA GD + LG
Sbjct: 198 EAIKRLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKAAKGGDAEAMYQLGNF 257
Query: 179 YLQ----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
Y ++A+ QA+ G+ AQ QLALC + G G + + ++A W L++
Sbjct: 258 YFYGNSPLIGKYYKKAINYYTQAANKGNAAAQAQLALCFYNGIGTNASPKDAFSWILKSV 317
Query: 229 EGGYV-RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM-- 285
+A N +CY+ G G S+ QA ++ ++AA+ G AQ G L EG++
Sbjct: 318 NTNPTPKAQNNLGVCYAVGIGAHPSNAQALEFFQKAAEAGDVTAQYNLGNMLLQEGQLDV 377
Query: 286 MKAVVYLE 293
K YLE
Sbjct: 378 KKGFDYLE 385
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLG 176
D + +K A +G A + Y++ +EA + L + A GD Q+ L
Sbjct: 20 DANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWL-EKVAETGDLNAQYQLA 78
Query: 177 ISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
Y ++ V+ L + + AG+ AQ +LALC G+GV+ + ++ R + A
Sbjct: 79 QCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVEQSKEKYYRLIEKHA 138
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
E + + Y GEG+ +A+ W ++A+ G+ +A+L
Sbjct: 139 EKENSEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEL 183
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE------EAVKLLYQASIAGHVRAQYQLALCLHR 209
A+ +++AA GD Q+NLG LQE + L +A+ A H+ A +L
Sbjct: 346 ALEFFQKAAEAGDVTAQYNLGNMLLQEGQLDVKKGFDYLEKAAAANHLLALKKLGDLYFN 405
Query: 210 GRGVDFNLQEAARWYLRAA------------------EGGYVRAMYNTSLCYSFGEGLPL 251
G+ + + + A +Y +A+ E Y +YN S CY+ G+G+
Sbjct: 406 GKYTNQSFERAFEYYTKASKQTPTPQKEMLDYFYQGQEEAYADVLYNLSQCYAEGKGVKK 465
Query: 252 SHRQARKWMKRAA 264
S R+A KW +AA
Sbjct: 466 SMREASKWAVKAA 478
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQAAVL 166
++ G+GV ++ +K K A + ++ +D Y E K+ + Y QA+
Sbjct: 117 YRDGKGVEQSKEKYYRLIEKHAEKENSEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKN 176
Query: 167 GDPAGQFNLG-----ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
G+ + L ++ EA+K L Q + G+ AQ LA G+GV+ + +A
Sbjct: 177 GNSEAELLLASWTYEVNASNPEAIKRLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAI 236
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPL---SHRQARKWMKRAADCGH 268
+AA+GG AMY Y +G PL +++A + +AA+ G+
Sbjct: 237 EMLEKAAKGGDAEAMYQLGNFYFYGNS-PLIGKYYKKAINYYTQAANKGN 285
>gi|323451959|gb|EGB07834.1| hypothetical protein AURANDRAFT_26920 [Aureococcus anophagefferens]
Length = 409
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+AM+ L G+ ++HG GV+ + KA + A RG A ++G++ + K E A
Sbjct: 219 DAMIFL--GEFYEHGSGVKLDKKKAERLYRAAADRGDAAAQNNSGILLYHEKKFEEAFRY 276
Query: 160 YRQAAVLGDPAGQFNLGISYLQ---------EEAVKLLYQASIAGHVRAQYQLALCLHRG 210
AA G AG+ +LG++Y Q ++A K+ +A G V A +L G
Sbjct: 277 VALAADQGLTAGENSLGVAYHQGLFGLVTSDKKAAKIWKRAVELGSVEAMTKLGELYENG 336
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GV + ++A R Y AA+ G N CY GEG + +AR W++RAA GH +
Sbjct: 337 SGVKLDKKKAERLYRMAADRGDAPGENNLGCCYQHGEGTEVDLGKARYWLERAAAKGHER 396
Query: 271 A 271
A
Sbjct: 397 A 397
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 114/283 (40%), Gaps = 28/283 (9%)
Query: 49 CSRSIKSTEGHDFASLPFDVLNKIAASFT----------LPQLRAASLVCKSWNDALRPL 98
C E D A L V N++ + T +++ K W A+ L
Sbjct: 26 CRLPCPKNEAEDLARLRRHVENEVPEAITHLGDSYQEGWYGLVKSDKKAAKIWKRAV-EL 84
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
+ ++ G+ + G V+ + +KA F A RG A GL+ +K E A
Sbjct: 85 GDVEAMVSLGELHQRGSAVKLDKEKAERLFRMAADRGDACAQSSLGLLLHSEEKHEEAFR 144
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRG 210
AA G + + NLG+ Y E ++ +A+ G +A LA
Sbjct: 145 YVALAADQGRTSAESNLGVCYRDGEGTEVDLGKARYWFERAAAKGSEQATKNLAR----- 199
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
+ Q+AA+ Y RA E G V AM Y G G+ L ++A + + AAD G
Sbjct: 200 ----LDAQKAAKIYRRAVELGDVDAMIFLGEFYEHGSGVKLDKKKAERLYRAAADRGDAA 255
Query: 271 AQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 313
AQ G+ L+ E + +A Y+ LA G TA ++ V Q
Sbjct: 256 AQNNSGILLYHEKKFEEAFRYVALAADQGLTAGENSLGVAYHQ 298
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++AA+ + RA E G V AM + + G + L +A + + AAD G AQ GL
Sbjct: 72 KKAAKIWKRAVELGDVEAMVSLGELHQRGSAVKLDKEKAERLFRMAADRGDACAQSSLGL 131
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
L +E + +A Y+ LA G T+A+ V + T D
Sbjct: 132 LLHSEEKHEEAFRYVALAADQGRTSAESNLGVCYRDGEGTEVD 174
>gi|238913659|ref|ZP_04657496.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 509
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFAPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVI 310
AQ G ++ G + +A ++ +A+ E + D +I
Sbjct: 419 FAPAQSALG-EIYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALI 466
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPSSYTPGHIPLSALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|354594378|ref|ZP_09012417.1| hypothetical protein CIN_11130 [Commensalibacter intestini A911]
gi|353672054|gb|EHD13754.1| hypothetical protein CIN_11130 [Commensalibacter intestini A911]
Length = 213
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L+ G + G+GV + KA + F K A +G+ A + G MY+
Sbjct: 53 LKLGMTYVLGQGVSADYQKAAEYFNKAANQGNAFAQYNLGSMYY---------------- 96
Query: 165 VLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
+ G+ ++A++ +A+ G+V A QL + G+GV + Q+AA ++
Sbjct: 97 --------YGKGVPQDDQKAIEYFNKAADQGNVSALTQLGVIYAEGQGVSQDYQKAAEYW 148
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+AA GY A YN Y +G G P ++ ++ +AAD G AQ
Sbjct: 149 DKAANQGYEAAQYNLGRMYYYGRGFPQDSQKTIEYFNKAADQGDVIAQ 196
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+V AQ +L + G+GV + Q+AA ++ +AA G A YN Y +G+G+P +
Sbjct: 47 GNVNAQLKLGMTYVLGQGVSADYQKAAEYFNKAANQGNAFAQYNLGSMYYYGKGVPQDDQ 106
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADH 305
+A ++ +AAD G+ A + G+ ++ EG + KA Y + A G AA +
Sbjct: 107 KAIEYFNKAADQGNVSALTQLGV-IYAEGQGVSQDYQKAAEYWDKAANQGYEAAQY 161
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLAL 205
++++ L ++ A G+ Q LG++Y+ + V YQ A+ G+ AQY L
Sbjct: 34 KSSLMLVKERADQGNVNAQLKLGMTYVLGQGVSADYQKAAEYFNKAANQGNAFAQYNLGS 93
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ G+GV + Q+A ++ +AA+ G V A+ + Y+ G+G+ +++A ++ +AA+
Sbjct: 94 MYYYGKGVPQDDQKAIEYFNKAADQGNVSALTQLGVIYAEGQGVSQDYQKAAEYWDKAAN 153
Query: 266 CGHGKAQLEHG-LGLFTEG---EMMKAVVYLELATRAGETAA 303
G+ AQ G + + G + K + Y A G+ A
Sbjct: 154 QGYEAAQYNLGRMYYYGRGFPQDSQKTIEYFNKAADQGDVIA 195
>gi|284048398|ref|YP_003398737.1| Sel1 domain-containing protein repeat-containing protein
[Acidaminococcus fermentans DSM 20731]
gi|283952619|gb|ADB47422.1| Sel1 domain protein repeat-containing protein [Acidaminococcus
fermentans DSM 20731]
Length = 649
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 132 AARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK 186
A +G LA GLMY + + EAA Y++AA G GQ NLG Y + V+
Sbjct: 447 ADKGDFLAENVKGLMYDSGVGFPSSQTEAA-KWYQRAAEQGYARGQCNLGFMYEYGQGVE 505
Query: 187 LLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
Y+ ++ G+ R Q L + G+GV+ + ++A WY ++AE G YN
Sbjct: 506 QSYEKAVEWYRKAAEQGNARGQCHLGVMYEYGQGVEQSYEKAVEWYRKSAEQGEACGQYN 565
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
Y +G+G+ S +AR+W K+ +D G +A+
Sbjct: 566 LGSMYRYGKGVTRSIEKAREWYKKTSDQGIEQAK 599
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A++ Y A+ + D + + N I ++ E L + G A+ L G G
Sbjct: 415 AVAGYDYASRMPDSSEEKNKTIEEVKNEISVL----ADKGDFLAENVKGLMYDSGVGFPS 470
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ EAA+WY RAAE GY R N Y +G+G+ S+ +A +W ++AA+ G+ + Q
Sbjct: 471 SQTEAAKWYQRAAEQGYARGQCNLGFMYEYGQGVEQSYEKAVEWYRKAAEQGNARGQCHL 530
Query: 276 GL----GLFTEGEMMKAVVYLELATRAGETAADH 305
G+ G E KAV + + GE +
Sbjct: 531 GVMYEYGQGVEQSYEKAVEWYRKSAEQGEACGQY 564
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 175 LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
+G Q EA K +A+ G+ R Q L G+GV+ + ++A WY +AAE G R
Sbjct: 466 VGFPSSQTEAAKWYQRAAEQGYARGQCNLGFMYEYGQGVEQSYEKAVEWYRKAAEQGNAR 525
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
+ + Y +G+G+ S+ +A +W +++A+ G Q G
Sbjct: 526 GQCHLGVMYEYGQGVEQSYEKAVEWYRKSAEQGEACGQYNLG 567
>gi|429747727|ref|ZP_19280977.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429162529|gb|EKY04844.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 815
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 177 ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+SY Q+ VK L + + G V+AQ +LA +G+GV + QEA W + AE G + A
Sbjct: 15 LSYGQDANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQ 74
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y + CY G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 75 YQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ + QY LA C + G G+D + ++AA +Y +A Y A + CY GEG+ S +
Sbjct: 729 YAQGQYNLANCYYNGNGIDRSYEKAANYYKLSARKDYAPAQFRLGHCYYHGEGIEQSDSR 788
Query: 256 ARKWMKRAADCGHGKA 271
A W ++A D G KA
Sbjct: 789 AADWFEQACDNGEKKA 804
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 123 KALDSFLKGAARGSTLA---MVDAGLMYWEMDKKEA-AISLYRQAAVLGDPAGQFNLGIS 178
+A+ + A +G+T A + DA L ++K EA AI + +AA GD + LG
Sbjct: 198 EAIKRLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKAAKGGDAEALYQLGNF 257
Query: 179 YLQ----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
Y ++A+ QA+ G+ AQ QLALC + G G + + +EA W L++
Sbjct: 258 YFYGNSPLIGKYYKKAINYYTQAANKGNAAAQAQLALCFYNGIGTNASPKEAFSWILKSV 317
Query: 229 EGGYV-RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM-- 285
+A N +CY+ G G S+ QA ++ ++AA+ G AQ G L EG++
Sbjct: 318 NTNPTPKAQNNLGVCYAVGIGAHPSNAQALEFFQKAAEAGDVTAQYNLGNMLLQEGQLDV 377
Query: 286 MKAVVYLE 293
K YLE
Sbjct: 378 KKGFDYLE 385
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q L +Y + + V+ YQ ++ G + AQYQLA C G+GV + Q
Sbjct: 33 GDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQYQLAQCYFNGKGVPKSPQ 92
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 274
+ W + A+ G A +LCY G+G+ S + +++ A+ + + QL+
Sbjct: 93 KGVEWLTKVADAGNPEAQRELALCYRDGKGVEQSKEKYYALIEKHAEKENPEVQLDLAKA 152
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAAD 304
+ G ++ KA + E A++ G + A+
Sbjct: 153 YHSGEGVTKDVNKAKYWAEQASKNGNSEAE 182
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE------EAVKLLYQASIAGHVRAQYQLALCLHR 209
A+ +++AA GD Q+NLG LQE + L +A+ A H+ A +L
Sbjct: 346 ALEFFQKAAEAGDVTAQYNLGNMLLQEGQLDVKKGFDYLEKAAAANHLLALKKLGDLYFN 405
Query: 210 GRGVDFNLQEAARWYLRAA------------------EGGYVRAMYNTSLCYSFGEGLPL 251
G+ + + + A +Y +A+ E Y +YN S CY+ G+G+
Sbjct: 406 GKYTNQSFERAFEYYTKASKQTPTPQKEMLDYFYQGQEEAYADVLYNLSQCYAEGKGVKK 465
Query: 252 SHRQARKWMKRAA 264
S R+A KW +AA
Sbjct: 466 SMREASKWAVKAA 478
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLG 176
D + +K A +G A + Y++ +EA + L + A GD Q+ L
Sbjct: 20 DANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWL-EKVAETGDLNAQYQLA 78
Query: 177 ISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL--- 225
Y ++ V+ L + + AG+ AQ +LALC G+GV+ Q ++Y
Sbjct: 79 QCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVE---QSKEKYYALIE 135
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ AE + + Y GEG+ +A+ W ++A+ G+ +A+L
Sbjct: 136 KHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEL 183
>gi|417326034|ref|ZP_12111832.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353574337|gb|EHC37412.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
Length = 509
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFAPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FAPAQ 423
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADQVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|303289691|ref|XP_003064133.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454449|gb|EEH51755.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 357
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 96/217 (44%), Gaps = 17/217 (7%)
Query: 100 EAMVLLRWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EA + W F HG GV K+ + +K A G A G Y +M +AA
Sbjct: 106 EAARTIAW--HFFHGTDGVEKDTELHFRWLVKAAELGDAKAQCRIGSEYNQMSNYDAARK 163
Query: 159 LYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRG 210
+ +AA G+ NLG Y + + V+ +A++ G+ AQY L
Sbjct: 164 WFDKAAAQGNADAMNNLGALYYKGQGVEKNISTAAEWYLKAAMKGNSHAQYTYGALLD-- 221
Query: 211 RGVDFNLQE-AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
+D N E A +WYL+AA G AM N +L Y G+G+ + A +W +AA G
Sbjct: 222 --IDMNQHEDAMKWYLKAAAQGDANAMNNLALLYFNGKGVERNVSTAAEWFLKAASKGDR 279
Query: 270 KAQLEHGLGLFTE-GEMMKAVVYLELATRAGETAADH 305
+AQ +G LF E G+ A+ + A G A H
Sbjct: 280 EAQCNYGNILFEEMGQYEDAMKWYMKAAAQGHAEATH 316
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 87 VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG-L 145
+ W D A + G + G+GV KN+ A + +LK A +G++ A G L
Sbjct: 160 AARKWFDKAAAQGNADAMNNLGALYYKGQGVEKNISTAAEWYLKAAMKGNSHAQYTYGAL 219
Query: 146 MYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHV 197
+ +M++ E A+ Y +AA GD NL + Y + V+ +A+ G
Sbjct: 220 LDIDMNQHEDAMKWYLKAAAQGDANAMNNLALLYFNGKGVERNVSTAAEWFLKAASKGDR 279
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQ L G ++A +WY++AA G+ A +N Y G+G+ + AR
Sbjct: 280 EAQCNYGNILFEEMG---QYEDAMKWYMKAAAQGHAEATHNIGTLYFRGDGVEQNKWTAR 336
Query: 258 KWMKRAADCG 267
+W ++AA G
Sbjct: 337 EWWEKAAAYG 346
>gi|323453627|gb|EGB09498.1| hypothetical protein AURANDRAFT_24301, partial [Aureococcus
anophagefferens]
Length = 391
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L G + HG G +L +A F + AA+G + + A + + ++ A+ LY++A
Sbjct: 129 LYHVGFCYVHGAGTEIDLAEAKRWFERAAAKGQKES-IHALEILAQHSIEKKAVKLYKRA 187
Query: 164 AVLGDPAGQFNLGISYLQEEAVKL-------LYQ-ASIAGHVRAQYQLALCLHRGRGVDF 215
A LGD NLG SY VK+ LY+ A+ GH AQ L L G G D
Sbjct: 188 AELGDVIAMLNLGCSYDHGGGVKMNKKKALQLYRMAADRGHASAQCNLGHMLLDG-GSDE 246
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+ +EA + +A G+ A+Y CY GEG +A++W +RAA GH A
Sbjct: 247 SQREAFEYLKLSAAQGFTHAIYQVGFCYVNGEGTETDLAEAKRWFERAAAKGHKDA 302
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 47/188 (25%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
KA+ + + A G +AM++ G Y +M+KK+A + LYR AA G + Q NLG
Sbjct: 179 KAVKLYKRAAELGDVIAMLNLGCSYDHGGGVKMNKKKA-LQLYRMAADRGHASAQCNLGH 237
Query: 178 SYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA-- 228
L Q EA + L ++ G A YQ+ C G G + +L EA RW+ RAA
Sbjct: 238 MLLDGGSDESQREAFEYLKLSAAQGFTHAIYQVGFCYVNGEGTETDLAEAKRWFERAAAK 297
Query: 229 --------------EG------------------GYVRAMYNTSLCYSFGEGLPLSHRQA 256
EG G+ A+Y C+ GEG + +
Sbjct: 298 GHKDAIRGLEVLLDEGSDESQREAFKYYMLSAARGFTDAIYMVGQCHVNGEGTEVDLVEG 357
Query: 257 RKWMKRAA 264
++W +RAA
Sbjct: 358 KRWFERAA 365
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 47/185 (25%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKL-------LYQ-ASIAGHVRAQ-- 200
DKK A+ LY++A LGD NLG +Y + AVK+ LY+ A+ GH RAQ
Sbjct: 3 DKK--AVKLYKRAVELGDVDATLNLGYAYEKGLAVKMDLKKGVQLYRMAADRGHARAQCN 60
Query: 201 ---------------------------------YQLALCLHRGRGVDFNLQEAARWYLRA 227
Y + C G G + +L+EA + +
Sbjct: 61 LATMLRDESSDESQREAFEYYMLSAAQGYTDAIYMVGCCYVHGSGTEVDLREAFEYLKLS 120
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
A G+ A+Y+ CY G G + +A++W +RAA G+ + H L + + + K
Sbjct: 121 AAQGFTNALYHVGFCYVHGAGTEIDLAEAKRWFERAA--AKGQKESIHALEILAQHSIEK 178
Query: 288 AVVYL 292
V L
Sbjct: 179 KAVKL 183
>gi|378445167|ref|YP_005232799.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|261246946|emb|CBG24763.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
Length = 491
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 258 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 317
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 318 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 377
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 378 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 434
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 281 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 340
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 341 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 400
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVILQ 312
AQ G ++ G + +A ++ +A+ E + D +I +
Sbjct: 401 FTPAQSALGE-IYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALIAE 450
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 40 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 99
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 100 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 159
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 160 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 217
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 195 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 251
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 252 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 311
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 312 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 371
Query: 275 HGLGLFT 281
G+ T
Sbjct: 372 LGVAYST 378
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G V AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 21 VQELEQKAEQGDVSAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 80
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 81 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 140
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 141 D--AGVVRGQGSASS 153
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 25 EQKAEQGDVSAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 84
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 85 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 136
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 76 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 135
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 136 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 195
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 196 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 255
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 256 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 314
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 315 QQALAWYRKAARQGLPAA 332
>gi|438059179|ref|ZP_20856620.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435313876|gb|ELO87401.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
Length = 470
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 237 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 296
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 297 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 356
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 357 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 413
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 260 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 319
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 320 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 379
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 380 FTPAQLALG 388
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 19 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 78
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 79 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 138
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 139 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 194
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 174 GVAYFYGEGVPQDYRQAVYWLNEGIPSSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 230
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 231 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 290
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 291 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 350
Query: 275 HGLGLFT 281
G+ T
Sbjct: 351 LGVAYST 357
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 5 QKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 64
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 65 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 115
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L Q + G AQ+ L GR V + + A +W +A + G + + Y++GE
Sbjct: 3 LEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGE 62
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAADHV 306
PLS ++A +W ++AA+ G Q G ++ +G + LE +A D
Sbjct: 63 NFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTND-- 120
Query: 307 KNVILQQLSATS 318
V+ Q SA+S
Sbjct: 121 AGVVRGQGSASS 132
>gi|17988811|ref|NP_541444.1| TPR repeat-containing protein, partial [Brucella melitensis bv. 1
str. 16M]
gi|17984631|gb|AAL53708.1| tetratricopeptide repeat family protein [Brucella melitensis bv. 1
str. 16M]
Length = 317
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 37 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIG 96
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 97 SFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 156
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 157 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 216
Query: 321 RAMLVVDSWRAMP 333
RA V W+A P
Sbjct: 217 RAKGAVKLWKAKP 229
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N +K AA+ LA D G
Sbjct: 44 LREAAAKGDIRALFEIGNRYMEGRGVAEN--------VKEAAKWYQLA-ADQGF------ 88
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 89 ----APAQYR--------IGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFA 136
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 137 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 196
Query: 269 GKA 271
A
Sbjct: 197 KDA 199
>gi|419739872|ref|ZP_14266613.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381297437|gb|EIC38528.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
Length = 510
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 277 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 336
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 337 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 396
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 397 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 453
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 300 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 359
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 360 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 419
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVILQ 312
AQ G ++ G + +A ++ +A+ E + D +I +
Sbjct: 420 FTPAQSALGE-IYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALIAE 469
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 59 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 118
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 119 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 178
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 179 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 236
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 214 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 270
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 271 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 330
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 331 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 390
Query: 275 HGLGLFT 281
G+ T
Sbjct: 391 LGVAYST 397
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 44 EQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 103
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 155
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 40 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 99
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 100 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 159
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 160 D--AGVVRGQGSASS 172
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 95 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 154
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 155 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 214
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 215 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 274
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 275 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 333
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 334 QQALAWYRKAARQGLPAA 351
>gi|290982691|ref|XP_002674063.1| predicted protein [Naegleria gruberi]
gi|284087651|gb|EFC41319.1| predicted protein [Naegleria gruberi]
Length = 551
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYR------ 161
G ++ GV +NL KA + L+ A +G T +M+ Y E + + R
Sbjct: 120 GLLYRFAEGVEQNLPKAFEFHLRAAKQGITTSMLAVACSY------ELGMGIMRDISKSF 173
Query: 162 ----QAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHR 209
+AA GD Q+ +G +Y E V+ +A+ VRAQ + + +
Sbjct: 174 EWLLKAAENGDVGAQYYVGHAYEIGEGVEPDDTKSFEWYLKAAEQMDVRAQLAIGISFYC 233
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
GRGV N +++ W+L+AAE G A + Y GEG+ + +A +W ++A+ GH
Sbjct: 234 GRGVTENQRKSFEWFLKAAEQGDKSAQFYVGCAYDSGEGVEKNRYKAFEWYLKSAENGHK 293
Query: 270 KAQL 273
AQ
Sbjct: 294 DAQF 297
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDP 169
G GV K++ KA + +LK A G A + GL+Y + E A + +AA G
Sbjct: 90 GLGVEKDIRKAFEWYLKSAENGFAKAQCNVGLLYRFAEGVEQNLPKAFEFHLRAAKQGIT 149
Query: 170 ------AGQFNLGISYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
A + LG+ +++ ++ + L +A+ G V AQY + G GV+ + ++
Sbjct: 150 TSMLAVACSYELGMGIMRDISKSFEWLLKAAENGDVGAQYYVGHAYEIGEGVEPDDTKSF 209
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
WYL+AAE VRA + + G G+ + R++ +W +AA+ G AQ G
Sbjct: 210 EWYLKAAEQMDVRAQLAIGISFYCGRGVTENQRKSFEWFLKAAEQGDKSAQFYVG 264
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
++ G G+ +++ K+ + LK A G A G Y + E + Y +AA
Sbjct: 159 YELGMGIMRDISKSFEWLLKAAENGDVGAQYYVGHAYEIGEGVEPDDTKSFEWYLKAAEQ 218
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
D Q +GIS+ Q ++ + +A+ G AQ+ + G GV+ N
Sbjct: 219 MDVRAQLAIGISFYCGRGVTENQRKSFEWFLKAAEQGDKSAQFYVGCAYDSGEGVEKNRY 278
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+A WYL++AE G+ A +N Y G+G+ + W+ +
Sbjct: 279 KAFEWYLKSAENGHKDAQFNVVYAYEKGDGVEECFSKTVFWLAK 322
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 173 FNLGISYLQEEAVKLLYQ-----ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
FN G+ Y +E+ + +Q A Q+++A H G GV+ ++++A WYL++
Sbjct: 48 FNRGVLYGKEKEYEKAFQCFMKVAEECECADTQFKIAYYYHIGLGVEKDIRKAFEWYLKS 107
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----EHGLGLFTEG 283
AE G+ +A N L Y F EG+ + +A ++ RAA G + L + LG+
Sbjct: 108 AENGFAKAQCNVGLLYRFAEGVEQNLPKAFEFHLRAAKQGITTSMLAVACSYELGMGIMR 167
Query: 284 EMMKAVVYLELATRAGETAADH 305
++ K+ +L A G+ A +
Sbjct: 168 DISKSFEWLLKAAENGDVGAQY 189
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 12/137 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEAAISLYRQA 163
G ++ G GV + K+ + +LK A + A + G+ ++ + + + + +A
Sbjct: 192 GHAYEIGEGVEPDDTKSFEWYLKAAEQMDVRAQLAIGISFYCGRGVTENQRKSFEWFLKA 251
Query: 164 AVLGDPAGQFNLGISYLQEEAV-KLLYQA-------SIAGHVRAQYQLALCLHRGRGVDF 215
A GD + QF +G +Y E V K Y+A + GH AQ+ + +G GV+
Sbjct: 252 AEQGDKSAQFYVGCAYDSGEGVEKNRYKAFEWYLKSAENGHKDAQFNVVYAYEKGDGVEE 311
Query: 216 NLQEAARWYLRAAEGGY 232
+ W + G +
Sbjct: 312 CFSKTVFWLAKRLNGNF 328
>gi|427764964|ref|ZP_18966556.1| hypothetical protein B581_10537, partial [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|414065436|gb|EKT46181.1| hypothetical protein B581_10537, partial [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
Length = 431
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 198 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 257
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 258 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 317
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 318 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 374
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 221 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 280
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 281 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 340
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVI 310
AQ G ++ G + +A ++ +A+ E + D +I
Sbjct: 341 FTPAQSALGE-IYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALI 388
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 135 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 191
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 192 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 251
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 252 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 311
Query: 275 HGLGLFT 281
G+ T
Sbjct: 312 LGVAYST 318
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-- 198
++ A+ YR+AA LGD + Q LG +Y+ + Q ++ AG VR
Sbjct: 29 RQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQ 88
Query: 199 -----AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
AQ++L + G+GV + Q+ A +AAE Y A + Y +GEG+P +
Sbjct: 89 GSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDY 148
Query: 254 RQARKWMK 261
RQA W+
Sbjct: 149 RQAVYWLN 156
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 16 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 75
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 76 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 135
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 136 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQR 195
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 196 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 254
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 255 QQALAWYRKAARQGLPAA 272
>gi|153869990|ref|ZP_01999482.1| Sel1-like repeat [Beggiatoa sp. PS]
gi|152073542|gb|EDN70516.1| Sel1-like repeat [Beggiatoa sp. PS]
Length = 174
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 9/124 (7%)
Query: 157 ISLYRQAAVLGDPAG-QFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCL 207
I L Q ++ + AG F +G + Q E A +L +A+ G+ AQ+QL L
Sbjct: 3 ILLPNQQSLKPEEAGFSFEIGKLFYQGEETTQDLTLAAQLYLKAAEKGYTEAQFQLGLMY 62
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+G+GV + +AA+W+ AAE G++ A Y L Y GEG+P + +A KW K+AA+ G
Sbjct: 63 LQGKGVPQSFIQAAQWFYTAAEFGHIDAQYQLGLRYEKGEGVPQNRLKAFKWYKKAAEQG 122
Query: 268 HGKA 271
+A
Sbjct: 123 QYQA 126
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCL 207
A LY +AA G QF LG+ YLQ +A + Y A+ GH+ AQYQL L
Sbjct: 39 AAQLYLKAAEKGYTEAQFQLGLMYLQGKGVPQSFIQAAQWFYTAAEFGHIDAQYQLGLRY 98
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRA 235
+G GV N +A +WY +AAE G +A
Sbjct: 99 EKGEGVPQNRLKAFKWYKKAAEQGQYQA 126
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+++ ++G +L AA+ YL+AAE GY A + L Y G+G+P S QA +W
Sbjct: 20 FEIGKLFYQGEETTQDLTLAAQLYLKAAEKGYTEAQFQLGLMYLQGKGVPQSFIQAAQWF 79
Query: 261 KRAADCGHGKAQLEHGL 277
AA+ GH AQ + GL
Sbjct: 80 YTAAEFGHIDAQYQLGL 96
>gi|417341480|ref|ZP_12122523.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|357957836|gb|EHJ82717.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
Length = 521
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + AA+G A G+M+ + + + A
Sbjct: 288 AKVQYNFGVWYYNGYHLLKDHNLALEWYRSAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 347
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 348 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 407
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 408 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 464
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 311 ALEWYRSAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 370
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 371 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 430
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 431 FTPAQLALG 439
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISL 159
L G + +G GV ++ +A+ +G T + +Y DK A +
Sbjct: 222 LYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKAHPADRVHSQTW 278
Query: 160 YRQAAVLGDPAGQFNLGISY------LQEEAVKLLYQASIA--GHVRAQYQLALCLHRGR 211
YR+ A Q+N G+ Y L++ + L + S A G AQ + + +G
Sbjct: 279 YRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRSAAAQGLAEAQDAIGVMFMQGE 338
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV + Q+A WY +AA G A + + +FG G+ S RQA W ++AA KA
Sbjct: 339 GVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKA 398
Query: 272 QLEHGLGLFT 281
Q + G+ T
Sbjct: 399 QYQLGVAYST 408
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 35/190 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------------------AGHVR- 198
A LGD + Q LG +Y+ + Q ++ AG VR
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVPPLQPMMRAGVVRG 177
Query: 199 ------AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
AQ++L + G+GV + Q+ A +AAE Y A + Y +GEG+P
Sbjct: 178 QGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQD 237
Query: 253 HRQARKWMKR 262
+RQA W+
Sbjct: 238 YRQAVYWLNE 247
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+GE PLS ++A +W ++AA+ G Q
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQ 126
>gi|167536781|ref|XP_001750061.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771390|gb|EDQ85057.1| predicted protein [Monosiga brevicollis MX1]
Length = 689
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISL 159
L G+ G GV ++ +A A G AM G MY E D A+
Sbjct: 238 LTLGQLHLQGHGVPQDFQRARHYLELAAGNGDPDAMASLGDMYVNGLGVEQDNA-TALKY 296
Query: 160 YRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
AA AG+ +LG+ YL E A KL ++A+ AGH Q+ L + G
Sbjct: 297 LETAAQRNSAAGRTSLGVMYLNGWSVQRDPEMAYKLFHKAAAAGHPDGQHNLGSLYYSGT 356
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
G + ++A ++ AA+ G+V AMYN +L + G G S AR +K A+ G
Sbjct: 357 GTTKDYRKAMHYFTLAAQQGHVLAMYNLALMHGHGIGTSRSCESARGLLKNVAERGEWGR 416
Query: 272 QLEHGLGLFTEGEMMKAVV-YLELATRAGETA 302
+L + ++ G+ +A++ YL LA E A
Sbjct: 417 ELMNAHEIYESGDTDEALLRYLVLAEMGYEVA 448
>gi|340363636|ref|ZP_08685959.1| Sel1 domain protein [Neisseria macacae ATCC 33926]
gi|339885315|gb|EGQ75044.1| Sel1 domain protein [Neisseria macacae ATCC 33926]
Length = 267
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G+GVR++ +A++ + K A +G A + G+MY
Sbjct: 120 GAMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQNNLGVMY-------------------- 159
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
GQ G+ AV+ +A+ G AQ+ L L GRGV + +AA W+ +A
Sbjct: 160 -EKGQ---GVRQDYARAVEWFLKAAEQGTATAQFNLGLMYETGRGVRQDYAQAAGWFRKA 215
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
AE G A +N +L Y+FG G+P ++ A++W+ +A C +G Q
Sbjct: 216 AEQGDAYAQHNLALMYAFGRGVPQNYTIAKEWLGKA--CTNGDQQ 258
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 18/194 (9%)
Query: 129 LKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE-- 182
L+ A RG+ A + G+MY + A+ YR+AA G A Q+NLG+ Y +
Sbjct: 33 LQAAERGNVKAQNNLGVMYEKGLGVHQDYTQAMKWYRKAAEQGAAAAQYNLGLLYANDSS 92
Query: 183 ------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
+A + +A+ GH AQ L G+GV + +A WY ++A+ GY A
Sbjct: 93 NHQDYAQAAEWYRKAAEQGHPSAQNNLGAMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQ 152
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVY 291
N + Y G+G+ + +A +W +AA+ G AQ GL ++ G + +A +
Sbjct: 153 NNLGVMYEKGQGVRQDYARAVEWFLKAAEQGTATAQFNLGL-MYETGRGVRQDYAQAAGW 211
Query: 292 LELATRAGETAADH 305
A G+ A H
Sbjct: 212 FRKAAEQGDAYAQH 225
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
QA+ G+V+AQ L + +G GV + +A +WY +AAE G A YN L Y+
Sbjct: 34 QAAERGNVKAQNNLGVMYEKGLGVHQDYTQAMKWYRKAAEQGAAAAQYNLGLLYANDSSN 93
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAAD 304
+ QA +W ++AA+ GH AQ G ++ G + ++A+ + + + G A
Sbjct: 94 HQDYAQAAEWYRKAAEQGHPSAQNNLG-AMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQ 152
Query: 305 HVKNVILQQLSATSRDRAMLV 325
+ V+ ++ +D A V
Sbjct: 153 NNLGVMYEKGQGVRQDYARAV 173
>gi|422014678|ref|ZP_16361287.1| Sel1 domain-containing protein [Providencia burhodogranariea DSM
19968]
gi|414100558|gb|EKT62173.1| Sel1 domain-containing protein [Providencia burhodogranariea DSM
19968]
Length = 348
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-----MYWEMDKKEAA 156
++L W ++ G + ++ K+ +L A + + A+ G MY ++ ++A
Sbjct: 157 LMLAYW---YEKGVAITEDPQKSQQIYLSLAKKNNPQALYLLGYQAATGMYDNVNYQQAY 213
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLH 208
R A + PA Q +LG+ YL + A+K L AS G + AQ+ LAL
Sbjct: 214 QYFSRSAQLAFSPA-QNSLGMLYLHGQGVKKDVPSAIKWLTLASEQGEISAQFNLALIYA 272
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
RG GV + +A RW+++AA+ G A Y + CY +G G+ ++A W K AA H
Sbjct: 273 RGDGVPADQAKACRWFIKAAQHGNPDAQYASGACYQYGMGVTQDDQKALYWYKLAASQRH 332
Query: 269 GKAQ 272
+A+
Sbjct: 333 DRAE 336
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ L + G+GV ++ A +W A+E G + A +N +L Y+ G+G+P +A +
Sbjct: 227 AQNSLGMLYLHGQGVKKDVPSAIKWLTLASEQGEISAQFNLALIYARGDGVPADQAKACR 286
Query: 259 WMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELA 295
W +AA G+ AQ ++G+G+ + + KA+ + +LA
Sbjct: 287 WFIKAAQHGNPDAQYASGACYQYGMGVTQDDQ--KALYWYKLA 327
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQ+ LA+ + EAA+WY +AE G+ +A N +L Y G+G+ +
Sbjct: 45 GIAEAQFNLAILYQSEK----KFAEAAKWYRLSAEQGFTKAQINLALLYQQGKGVTKDSK 100
Query: 255 QARKWMKRAADCGHGKAQL 273
Q WM+++AD G Q+
Sbjct: 101 QMLYWMQKSADAGDPLGQM 119
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 167 GDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
G QFNL I Y E EA K ++ G +AQ LAL +G+GV + ++
Sbjct: 45 GIAEAQFNLAILYQSEKKFAEAAKWYRLSAEQGFTKAQINLALLYQQGKGVTKDSKQMLY 104
Query: 223 WYLRAAEGGYVRAMYNTS--LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------E 274
W ++A+ G N + + L + +QA+KW+++AA A+L E
Sbjct: 105 WMQKSADAGDPLGQMNMAEYTLEGIDKNLIKNKQQAQKWLEKAAAQHFQPAELMLAYWYE 164
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETA 302
G+ + TE +YL LA + A
Sbjct: 165 KGVAI-TEDPQKSQQIYLSLAKKNNPQA 191
>gi|182416044|ref|YP_001821110.1| peptidoglycan-binding LysM [Opitutus terrae PB90-1]
gi|177843258|gb|ACB77510.1| Peptidoglycan-binding LysM [Opitutus terrae PB90-1]
Length = 1910
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G + +G+GV ++ AL + + AARG A + G+M E+ + A A Y +
Sbjct: 59 GNAYANGQGVTQDFAAALRCYTQAAARGHAPAYFNLGMMA-ELGRGSAPDVAAAFKHYLK 117
Query: 163 AAVLGDPAGQFNLG------ISYLQE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A LG QFN G I Q+ EA QA+ G AQY LAL GRGV
Sbjct: 118 SAELGFAPAQFNAGNMYANGIGVAQDYFEAALWFRQAAERGVAEAQYNLALAYELGRGVT 177
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
+ +A RWY AA GY RA YN +L G G
Sbjct: 178 KDEGQAQRWYRDAANRGYARARYNLALMLEEGRG 211
>gi|421883900|ref|ZP_16315123.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|379986519|emb|CCF87396.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
Length = 376
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 34/278 (12%)
Query: 43 RRSRFSCSRSIKST--EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLRE 100
R++ + ++ I S+ GH +P +VL A A + ++W
Sbjct: 94 RQAVYWLNKGIPSSYAPGH----IPLNVLYDKAHP-------ADRVYSQTWYRKAAQRVM 142
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 143 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGESVSQDYQQA 202
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 203 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 262
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA--- 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 263 TGRGVPENSRNALKWYLKAAEQGFAPAQSALGEIYAHGRQGVPKDNKQAYIWYYMASIYT 322
Query: 265 -----DCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297
DC A+ G T ++ + +L R
Sbjct: 323 EKSKNDCSALIAERNRLKGTLTPDQLSETYAAFDLIRR 360
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ KG + ++Y DK A + YR+
Sbjct: 80 GVAYFYGEGVPQDYRQAVYWLNKGIPSSYAPGHIPLNVLY---DKAHPADRVYSQTWYRK 136
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
AA Q+N G+ Y L++ + L + +A+ G AQ + + +G V
Sbjct: 137 AAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGESVS 196
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 197 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 256
Query: 275 HGLGLFT 281
G+ T
Sbjct: 257 LGVAYST 263
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ++L + G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA
Sbjct: 39 AQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVY 98
Query: 259 WMKRAADCGHGKAQL 273
W+ + + +
Sbjct: 99 WLNKGIPSSYAPGHI 113
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 210 GRGVDFNLQEAARWYLRAA----EGGYVR-------AMYNTSLCYSFGEGLPLSHRQARK 258
G G N Q A WY +AA + G VR A + + Y+ G+G+P ++Q
Sbjct: 3 GDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAI 62
Query: 259 WMKRAADCGHGKAQLEHGLGLF 280
M++AA+ + AQL G+ F
Sbjct: 63 LMRKAAENMYYPAQLYLGVAYF 84
>gi|398948454|ref|ZP_10672807.1| TPR repeat-containing protein [Pseudomonas sp. GM33]
gi|398160685|gb|EJM48948.1| TPR repeat-containing protein [Pseudomonas sp. GM33]
Length = 401
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLYRQAAVLGDPA 170
+ KN +K L + A + + AM+ G Y + + L R+AA G+ +
Sbjct: 198 LPKNTEKGLSFLNQAAEQDDSSAMIVLGESYLGGIEGVPQNPMKGETYL-RRAADQGNSS 256
Query: 171 GQFNLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q +G I EA +A+ G AQY+L + G+GV N ++AA
Sbjct: 257 AQIKMGNRLLYGLDIPKNPTEAFSWYLKAASQGSAEAQYKLGELYYEGKGVPQNYKQAAS 316
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 282
WYL++AE Y+ A+ + CY+FGEG+ ++QA W G A +G G FTE
Sbjct: 317 WYLKSAEQKYLSAIRALANCYAFGEGVTQDYKQAYVW------ASLGAAIDTYGFGNFTE 370
>gi|328542522|ref|YP_004302631.1| Sel1-like repeat protein [Polymorphum gilvum SL003B-26A1]
gi|326412268|gb|ADZ69331.1| Sel1 repeat family [Polymorphum gilvum SL003B-26A1]
Length = 366
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLY 160
R + + G+GV ++ KA D F A G+ AM + ++Y E + + A L
Sbjct: 148 FRLAQLYLLGQGVERDKKKAADLFEIAADAGNPSAMYNLAILYQEGEGRPYNEAEAAKLL 207
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRG 212
+AA LGD Q++LG+ YL+ A L +A+ GHV AQ + +G+G
Sbjct: 208 ERAADLGDTEAQYSLGLQYLEGNATIRDPARGAFWLGRAARRGHVSAQVYYGILRFQGKG 267
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
V+ + EAA W+ RAA G AM + Y++G G + A W
Sbjct: 268 VEPDEAEAADWFERAAAAGNPVAMNRLARIYAYGRGRDVDPVAAASW 314
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLL---------YQ-ASIAGHVRAQYQLAL 205
A++L A GD A Q LG+ +QE + + YQ A++ G A ++LA
Sbjct: 95 AVALATPLAEAGDAAAQTLLGV--MQETGLGIAQDKRRAAEWYQVATVTGDPGAAFRLAQ 152
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G+GV+ + ++AA + AA+ G AMYN ++ Y GEG P + +A K ++RAAD
Sbjct: 153 LYLLGQGVERDKKKAADLFEIAADAGNPSAMYNLAILYQEGEGRPYNEAEAAKLLERAAD 212
Query: 266 CGHGKAQLEHGL 277
G +AQ GL
Sbjct: 213 LGDTEAQYSLGL 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQ 200
E DKK+AA L+ AA G+P+ +NL I Y + EA KLL +A+ G AQ
Sbjct: 161 ERDKKKAA-DLFEIAADAGNPSAMYNLAILYQEGEGRPYNEAEAAKLLERAADLGDTEAQ 219
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y L L G + A W RAA G+V A + G+G+ +A W
Sbjct: 220 YSLGLQYLEGNATIRDPARGAFWLGRAARRGHVSAQVYYGILRFQGKGVEPDEAEAADWF 279
Query: 261 KRAADCGH 268
+RAA G+
Sbjct: 280 ERAAAAGN 287
>gi|294648896|ref|ZP_06726351.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292825218|gb|EFF83966.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 217
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 15/165 (9%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAISLYRQAAVLGDPA 170
V+K+++ A +L+ A +G A + G++Y E D +A + +R++A G+P
Sbjct: 42 VKKDINVAYAKYLEEAKQGDPNAQLSLGMIYKRGSYGIERDFIKA-VDWFRESAKSGNPY 100
Query: 171 GQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q+NLG++YL E++ +A+I GH +QY++A G GV N +A
Sbjct: 101 AQYNLGLAYLFGQGVDENLEKSYAWFMKAAIQGHANSQYEIASMYLAGEGVAKNEIKAVE 160
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
W +AA+ A Y Y G ++ + A+KW K+AA+ G
Sbjct: 161 WMTKAADQEMAIAAYALGEMYEDGSSGTVNIKLAKKWYKKAAEYG 205
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 20/163 (12%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE---------EAVKLLYQASIAGHVRAQYQLALC 206
A + Y + A GDP Q +LG+ Y + +AV +++ +G+ AQY L L
Sbjct: 49 AYAKYLEEAKQGDPNAQLSLGMIYKRGSYGIERDFIKAVDWFRESAKSGNPYAQYNLGLA 108
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G+GVD NL+++ W+++AA G+ + Y + Y GEG+ + +A +WM +AAD
Sbjct: 109 YLFGQGVDENLEKSYAWFMKAAIQGHANSQYEIASMYLAGEGVAKNEIKAVEWMTKAADQ 168
Query: 267 GHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADH 305
E + + GEM + V ++LA + + AA++
Sbjct: 169 -------EMAIAAYALGEMYEDGSSGTVNIKLAKKWYKKAAEY 204
>gi|123437585|ref|XP_001309587.1| TKL family protein kinase [Trichomonas vaginalis G3]
gi|121891320|gb|EAX96657.1| TKL family protein kinase [Trichomonas vaginalis G3]
Length = 1103
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 69/238 (28%), Positives = 109/238 (45%), Gaps = 25/238 (10%)
Query: 81 LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
LR A+ +CK A EAM + K+G+GV+ N A SF+ A RG AM
Sbjct: 861 LRKAAYMCKL--SAESGNVEAM--YTFANIVKNGQGVQSNSVDAHSSFVLAADRGHVKAM 916
Query: 141 VDAGLMYWEMDKK-EAAISLYRQAAVLGDPAGQFNLGISYLQE---------EAVKLLYQ 190
+ A W ++K A+ Y+ AA D G + G +L E +A +
Sbjct: 917 LAAAYYMWTVEKDLPKALKYYKMAADQQDCDGLSSYG-HFLAEGLGCNKDPVKAAECFRA 975
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGL 249
A++ G Y A+ L G GV+ ++ AA++Y AA+ G V A + S + G EG
Sbjct: 976 AALMGSTLGMYNYAVTLQTGNGVERDITSAAKFYKMAADRGDVDACIHYSQLLATGWEGN 1035
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVK 307
+Q+ + K+AAD G+ + ++G L+ + K R +TAA ++K
Sbjct: 1036 QKDLQQSANYAKKAADLGNPRGMFQYGKMLWYGTGVQK---------RDQQTAASYIK 1084
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
SLY ++ D G+ N +Y + + +K L +A+ GH AQY+ + L++G V N
Sbjct: 345 SLYYLGKMIID--GKIN---NYDKIQGIKFLKKAAEGGHAEAQYECGMALYKGEDVGCNK 399
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG- 276
AA ++ +AA+ A+ S G+G+ +S +++K ++ AD + + G
Sbjct: 400 IMAAEFFKQAAKSYLPGAIIMLSKMLLVGDGVEMSKAKSKKLLQILADKQNVECAFILGK 459
Query: 277 ---LGLFTEGEMMKAVVYLELATRAGETAA 303
G F E ++ A YLE A +G + A
Sbjct: 460 YSYTGEFGEKDLATAEKYLEFAANSGNSEA 489
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+A Y A+ GH A + + L G GV +L++AA +AE G V AMY +
Sbjct: 827 KAAIYFYDAAKNGHSGAMLECSNFLSNGMGVKKDLRKAAYMCKLSAESGNVEAMYTFANI 886
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EGEMMKAVVYLELA 295
G+G+ + A AAD GH KA L ++T E ++ KA+ Y ++A
Sbjct: 887 VKNGQGVQSNSVDAHSSFVLAADRGHVKAMLAAAYYMWTVEKDLPKALKYYKMA 940
Score = 44.3 bits (103), Expect = 0.089, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
++Y A +L + +++ Q+ A+ + +A+ GH+ A+YQ L RG G +L
Sbjct: 772 AMYEYALILAAESNKYSA-----QQSAI-YMKKAADKGHLEAKYQCGNYLVRGFGTKQDL 825
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+AA ++ AA+ G+ AM S S G G+ R+A K +A+ G+ +A
Sbjct: 826 SKAAIYFYDAAKNGHSGAMLECSNFLSNGMGVKKDLRKAAYMCKLSAESGNVEA 879
Score = 41.6 bits (96), Expect = 0.48, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFT 281
+ AE G + AMY +L + E S +Q+ +MK+AAD GH +A+ + G G T
Sbjct: 763 KKAESGDINAMYEYALILA-AESNKYSAQQSAIYMKKAADKGHLEAKYQCGNYLVRGFGT 821
Query: 282 EGEMMKAVVYLELATRAGETAA 303
+ ++ KA +Y A + G + A
Sbjct: 822 KQDLSKAAIYFYDAAKNGHSGA 843
Score = 38.9 bits (89), Expect = 3.2, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 35/219 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G G G +++L KA F A G + AM++ + L
Sbjct: 812 GNYLVRGFGTKQDLSKAAIYFYDAAKNGHSGAMLEC-------------------SNFLS 852
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ +G+ +A + ++ +G+V A Y A + G+GV N +A ++ A
Sbjct: 853 N-----GMGVKKDLRKAAYMCKLSAESGNVEAMYTFANIVKNGQGVQSNSVDAHSSFVLA 907
Query: 228 AEGGYVRAMYNTS-LCYSFGEGLPLSHRQARKWMKRAA---DCGHGKAQLEHGL--GLFT 281
A+ G+V+AM + ++ + LP +A K+ K AA DC G + H L GL
Sbjct: 908 ADRGHVKAMLAAAYYMWTVEKDLP----KALKYYKMAADQQDC-DGLSSYGHFLAEGLGC 962
Query: 282 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ +KA A G T + V LQ + RD
Sbjct: 963 NKDPVKAAECFRAAALMGSTLGMYNYAVTLQTGNGVERD 1001
>gi|254293295|ref|YP_003059318.1| Sel1 domain-containing protein repeat-containing protein [Hirschia
baltica ATCC 49814]
gi|254041826|gb|ACT58621.1| Sel1 domain protein repeat-containing protein [Hirschia baltica ATCC
49814]
Length = 1303
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 163 AAVLGDPAGQFNLGISYL----QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
AA G P L I L + A + + +A+ G AQY++ RG GV +++
Sbjct: 1043 AAASGSPIALHELAIKQLASGEKRIAAETMRKAADQGLAAAQYRMGKLYERGEGVPRSIK 1102
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------ 272
E+ +W AAE G V+AM++ ++ Y+ GEG S +W RAA+ G +Q
Sbjct: 1103 ESRKWTKLAAENGNVKAMHDLAVFYAEGEGGEQSFLSGVEWFSRAAEYGLIDSQYNLGVL 1162
Query: 273 LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
E GLG+ T ++ KA + E+A G+ IL+ L +T ++ + D++
Sbjct: 1163 YEQGLGVST--DLAKAAYWFEVAGHNGDADGTRRAREILRNLPSTEANKIIADADAF 1217
>gi|163851702|ref|YP_001639745.1| Sel1 domain-containing protein [Methylobacterium extorquens PA1]
gi|163663307|gb|ABY30674.1| Sel1 domain protein repeat-containing protein [Methylobacterium
extorquens PA1]
Length = 464
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 87 VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM 146
K W + A + G ++ G+GV K+ A + KGA G+ AM + G +
Sbjct: 213 AAKGWFEKAASAGSAEAMNDLGLLYEDGQGVAKDDAAAKGWYEKGAEAGNPFAMTNLGSL 272
Query: 147 YWEMD--KKEAAIS--LYRQAAVLGDPAGQFNLGISYLQEEAV-------KLLY-QASIA 194
Y + K++ A + Y +AA +P G LG+ Y V KL Y +A+ A
Sbjct: 273 YEKGQGVKQDYATAKLWYEKAAAADNPDGMRGLGLLYGNGRGVTQDYATAKLWYDKAANA 332
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G A L + G+GV + A WY +AA G ++MYN Y G+G+ +
Sbjct: 333 GSAFAMNDLGILYDNGQGVKQDYATAKLWYEKAAAAGNAQSMYNLGALYENGQGVKKDYG 392
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 303
A+ W ++AAD G + G L+ EG + A ++ E A G+T A
Sbjct: 393 SAKLWYEKAADAGSPEGMSALGT-LYAEGWGVTRDRSAAKLWYEKAAALGDTGA 445
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+A+ AG A ++L L G+GV + A WY +AA G +MYN + FG G+
Sbjct: 40 KAATAGDATAMHKLGLLYEEGQGVAQDYAAARGWYEKAAAKGLAESMYNLGILDEFGRGV 99
Query: 250 PLSHRQARKW 259
+ A+ W
Sbjct: 100 AQDYAAAKGW 109
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEAAIS--LYRQAAVL 166
+ +GRGV ++ A + K A GS AM D G++Y + K++ A + Y +AA
Sbjct: 309 YGNGRGVTQDYATAKLWYDKAANAGSAFAMNDLGILYDNGQGVKQDYATAKLWYEKAAAA 368
Query: 167 GDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ +NLG Y + VK Y +A+ AG L G GV +
Sbjct: 369 GNAQSMYNLGALYENGQGVKKDYGSAKLWYEKAADAGSPEGMSALGTLYAEGWGVTRDRS 428
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
A WY +AA G AM + + G G + R
Sbjct: 429 AAKLWYEKAAALGDTGAMQKIAALFEKGTGKAGAKR 464
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
LG++ A +A+ AG A L L G+GV + A WY + AE G
Sbjct: 204 GLGVTQDYAAAKGWFEKAASAGSAEAMNDLGLLYEDGQGVAKDDAAAKGWYEKGAEAGNP 263
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
AM N Y G+G+ + A+ W ++AA
Sbjct: 264 FAMTNLGSLYEKGQGVKQDYATAKLWYEKAA 294
>gi|416228537|ref|ZP_11627691.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
46P47B1]
gi|326563872|gb|EGE14123.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
46P47B1]
Length = 297
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GVR++ KA + K A +G A + G+MY + + A+ Y +A
Sbjct: 74 GAMYAEGDGVRQDYHKAFEWTTKAAHQGFAEAQFNLGVMYRKGQGVSQDDQKAVEWYTKA 133
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A GD Q+NLG+ Y Q + V+ Y S+ G+ AQ+ LAL + G+GV
Sbjct: 134 ANQGDAQAQYNLGVMYAQGKGVRQDYYKSVEWYTKAAKQGYADAQFNLALMYYEGQGVRQ 193
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ +A W+ +AA G+ A N + Y G G+ +++A +W +
Sbjct: 194 DYHKAFEWFTKAAHQGHAAAQSNLGVMYDKGHGVRQDYQKAIEWYTK 240
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNL 175
N KA + + K A +G +A G MY E D A +AA G QFNL
Sbjct: 50 NHAKAFEWWQKSAHQGHAVAQTILGAMYAEGDGVRQDYHKAFEWTTKAAHQGFAEAQFNL 109
Query: 176 GISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ Y + ++AV+ +A+ G +AQY L + +G+GV + ++ WY +A
Sbjct: 110 GVMYRKGQGVSQDDQKAVEWYTKAANQGDAQAQYNLGVMYAQGKGVRQDYYKSVEWYTKA 169
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
A+ GY A +N +L Y G+G+ + +A +W +
Sbjct: 170 AKQGYADAQFNLALMYYEGQGVRQDYHKAFEWFTK 204
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+L RQA GD QFNL Y Q+ +A + +++ GH AQ L G GV
Sbjct: 25 TLTRQAQN-GDAGAQFNLADEYYQQGNHAKAFEWWQKSAHQGHAVAQTILGAMYAEGDGV 83
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +A W +AA G+ A +N + Y G+G+ ++A +W +AA+ G +AQ
Sbjct: 84 RQDYHKAFEWTTKAAHQGFAEAQFNLGVMYRKGQGVSQDDQKAVEWYTKAANQGDAQAQY 143
Query: 274 EHGLGLFTEGEMMKAVVY--LELATRAGETA-ADHVKNVIL 311
G+ ++ +G+ ++ Y +E T+A + AD N+ L
Sbjct: 144 NLGV-MYAQGKGVRQDYYKSVEWYTKAAKQGYADAQFNLAL 183
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A G + G+GVR++ K+++ + K A +G A + LMY+E
Sbjct: 138 DAQAQYNLGVMYAQGKGVRQDYYKSVEWYTKAAKQGYADAQFNLALMYYEGQGVRQDYHK 197
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQY--------QLALCL 207
A + +AA G A Q NLG+ Y + V+ YQ +I + +A + L
Sbjct: 198 AFEWFTKAAHQGHAAAQSNLGVMYDKGHGVRQDYQKAIEWYTKAAHQGHAAAQSNLGAMY 257
Query: 208 HRGRGVDFNLQEAARWYLRAAEGG 231
+ G GV N A R+Y +A + G
Sbjct: 258 YNGHGVRQNKSTAKRYYGQACDNG 281
>gi|290989409|ref|XP_002677330.1| predicted protein [Naegleria gruberi]
gi|284090937|gb|EFC44586.1| predicted protein [Naegleria gruberi]
Length = 515
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G G K+ +KA + F K A +G A GLMY + E A Y ++
Sbjct: 337 GMKYIKGEGCEKSFEKAFEWFEKSANQGYNEAQYRLGLMYCFGQGCNESFEKAFEWYEKS 396
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G QF LG+ Y E+A + +++ G AQ+ +G G
Sbjct: 397 ANQGHNEAQFRLGLMYYLGNGCKQSFEKAFEWYEKSANQGIAIAQHMFGEMYLQGEGCKQ 456
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
++A W+ ++A GY A +N Y GEG S +A +W +++A+ GH
Sbjct: 457 LFEKAFEWFEKSANQGYNEAQFNLGSMYLIGEGCDKSFEKAFEWFEKSANQGH 509
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 180 LQEEAVKLLYQASIAGH------VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
L+ + + +++I H + QY L + +G G + + ++A W+ ++A GY
Sbjct: 307 LKNQVTETTLESTIIQHTANQENIVTQYNLGMKYIKGEGCEKSFEKAFEWFEKSANQGYN 366
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF----TEGEMMKAV 289
A Y L Y FG+G S +A +W +++A+ GH +AQ GL + + KA
Sbjct: 367 EAQYRLGLMYCFGQGCNESFEKAFEWYEKSANQGHNEAQFRLGLMYYLGNGCKQSFEKAF 426
Query: 290 VYLELATRAGETAADHV 306
+ E + G A H+
Sbjct: 427 EWYEKSANQGIAIAQHM 443
>gi|282858109|ref|ZP_06267304.1| Sel1 repeat protein [Pyramidobacter piscolens W5455]
gi|282584031|gb|EFB89404.1| Sel1 repeat protein [Pyramidobacter piscolens W5455]
Length = 452
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-- 155
L EA +LL + ++ G V+K+ +A+ + K A GS+ AM ++ W + E
Sbjct: 231 LPEAQLLL--AQLYQKGIFVKKDAKQAVRWYEKAARNGSSEAM---NILAWRYENGEGVT 285
Query: 156 -----AISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQ 202
A+ Y+ AA G+ F LG+ Y + A + +A+ G V A Y
Sbjct: 286 KSPTQALQWYKAAAERGEHNALFRLGVLYYTGKHVAADHALAFEYFKKAAELGDVAAWYN 345
Query: 203 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+A G G N +EA W+ RAA G RA N + Y+ GEG P+ +A W +
Sbjct: 346 VAWLNKTGDGTAQNFREAKTWFERAALTGNSRAQVNLGVMYANGEGFPVDLEEACFWFEL 405
Query: 263 AADCGHGKAQ 272
+ CG+ AQ
Sbjct: 406 SKLCGNEDAQ 415
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 82/189 (43%), Gaps = 15/189 (7%)
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDPAGQFNLGISYLQ---- 181
+ A G A + GL+Y ++ E A++LY +AA D L + YL
Sbjct: 154 RAADGGYAQAQRELGLLYETGERLEKDTARAVALYSEAAAQNDAFAMKFLAVLYLNGNNP 213
Query: 182 ---EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
A +LL +A A AQ LA +G V + ++A RWY +AA G AM
Sbjct: 214 AYRRTAFELLKRADRANLPEAQLLLAQLYQKGIFVKKDAKQAVRWYEKAARNGSSEAMNI 273
Query: 239 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLEL 294
+ Y GEG+ S QA +W K AA+ G A G+ +T + A Y +
Sbjct: 274 LAWRYENGEGVTKSPTQALQWYKAAAERGEHNALFRLGVLYYTGKHVAADHALAFEYFKK 333
Query: 295 ATRAGETAA 303
A G+ AA
Sbjct: 334 AAELGDVAA 342
>gi|158522728|ref|YP_001530598.1| Sel1 domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158511554|gb|ABW68521.1| Sel1 domain protein repeat-containing protein [Desulfococcus
oleovorans Hxd3]
Length = 254
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGISYL---- 180
LK A +G A G MY+ D E A+ ++AA G Q NLG+ Y
Sbjct: 30 LKKAEQGKCWAQTLIGYMYYLGDGVEQDFEKALFWTKKAAEQGGKDAQENLGLFYYVEGL 89
Query: 181 ------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
+EE+++ +A+ GH AQ L + G GV N Q+A W+ +AAE G
Sbjct: 90 KGMEVNKEESLQWFEKAAEQGHSGAQLDLGRMYYLGHGVPQNYQKAFEWFTKAAEQGESD 149
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
A Y Y +G G+P +++A +W +AA+ G +AQ G F
Sbjct: 150 AEYLLGGMYFYGTGVPQDYKKAFEWYSKAAEQGQPEAQASLGAMYF 195
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 81 LRAASLVCKSWNDALRPLREAMVLLRW-----GKRFKHGRGVRKNLDKALDSFLKGAARG 135
L AAS+ +S +D L++A W G + G GV ++ +KAL K A +G
Sbjct: 14 LFAASVNAES-DDFTETLKKAEQGKCWAQTLIGYMYYLGDGVEQDFEKALFWTKKAAEQG 72
Query: 136 STLAMVDAGLMYW-------EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLL 188
A + GL Y+ E++K+E+ + + +AA G Q +LG Y V
Sbjct: 73 GKDAQENLGLFYYVEGLKGMEVNKEES-LQWFEKAAEQGHSGAQLDLGRMYYLGHGVPQN 131
Query: 189 YQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
YQ A+ G A+Y L G GV + ++A WY +AAE G A +
Sbjct: 132 YQKAFEWFTKAAEQGESDAEYLLGGMYFYGTGVPQDYKKAFEWYSKAAEQGQPEAQASLG 191
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCG 267
Y G G+P +++ A KW AA G
Sbjct: 192 AMYFLGLGVPQNYKAAYKWGSLAAANG 218
>gi|418529155|ref|ZP_13095095.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
gi|371453581|gb|EHN66593.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
Length = 542
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G +N AL + K A +G A+ + G +Y E A+ +R+A
Sbjct: 337 GTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRA 396
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD + QFNL G + +A+K A+ GH AQ +L + G+G
Sbjct: 397 ADKGDASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAAR 456
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ +A +WY RAAE G A YN + Y+ G+G+ + +A W AA
Sbjct: 457 DYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNARAYFWYNLAA 505
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKEA---AISLYRQA 163
G+ + G GV ++ A F K A + + G +Y + + +++ A +++A
Sbjct: 265 GRMYMDGVGVPRDYKLAASWFQKSAEQWNADGQNHLGRLYLYGLGVEQSPAYAAQWFQRA 324
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A Q+NLG Y + A++ +A+ GH A + GRGV
Sbjct: 325 ADQNHADAQYNLGTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQ 384
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N A +W+ RAA+ G A +N + Y+ G+G S QA KW AA+ GH AQ
Sbjct: 385 NYATAMQWFRRAADKGDASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRL 444
Query: 276 GLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
G+ ++ EG+ KAV + + A G+ AA + ++ Q +RD A
Sbjct: 445 GV-MYAEGQGAARDYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNA 495
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 18/180 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + HG+GV +N A F K AA+G A G +Y + +EAA Y +
Sbjct: 85 GEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGLPQNYREAA-QWYGR 143
Query: 163 AAVLGDPAGQFNLGISYLQEE----------AVKLLYQASIAGHVRAQYQLALCLHRGRG 212
AA + Q+NL S+L +E A + L +++ GHV AQ++L +G G
Sbjct: 144 AAQQNNAVAQYNL--SHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRYIKGNG 201
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V N AA W+ +AA+ G+ A S G G+ L QA +W++RAA+ G +AQ
Sbjct: 202 VAVNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQ 261
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 18/235 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G G GV+ + +A + A +G A G MY + D K AA S +++
Sbjct: 229 GSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQNSLGRMYMDGVGVPRDYKLAA-SWFQK 287
Query: 163 AAVLGDPAGQ--------FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A + GQ + LG+ A + +A+ H AQY L G G
Sbjct: 288 SAEQWNADGQNHLGRLYLYGLGVEQSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTP 347
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N A +WY +AAE G+ A+ N Y+ G G+ ++ A +W +RAAD G AQ
Sbjct: 348 QNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRAADKGDASAQFN 407
Query: 275 ----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ G + +A+ + A G + A + V+ + +RD V
Sbjct: 408 LARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAARDYGKAV 462
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
G + +G+G+ +N +A + + A + + +A + +Y E + S Q +
Sbjct: 121 GALYANGQGLPQNYREAAQWYGRAAQQNNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKS 180
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G QF LG Y++ V + Y +A+ GH AQ QL L G GV
Sbjct: 181 AAQGHVTAQFELGQRYIKGNGVAVNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKL 240
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ +AA+W RAAE G RA + Y G G+P ++ A W +++A+
Sbjct: 241 DPVQAAQWLQRAAEQGDARAQNSLGRMYMDGVGVPRDYKLAASWFQKSAE 290
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGV 213
QAA GD Q LG Y+ + V + +A+ GH AQ L G+G+
Sbjct: 71 QAAERGDAKAQNQLGEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGL 130
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
N +EAA+WY RAA+ A YN S Y G G+P S A +W++++A GH AQ
Sbjct: 131 PQNYREAAQWYGRAAQQNNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQF 190
Query: 274 EHG 276
E G
Sbjct: 191 ELG 193
>gi|115522741|ref|YP_779652.1| Sel1 domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115516688|gb|ABJ04672.1| Sel1 domain protein repeat-containing protein [Rhodopseudomonas
palustris BisA53]
Length = 1095
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R AA+ GDP + +G+ Y + EEA K +A+ AG V A +++ +G G
Sbjct: 878 RAAALKGDPNAAYEIGLRYAEARGVAANFEEAAKWYDRAAQAGIVPAIFRIGTLNEKGLG 937
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + A R+Y+ AAE G +AM+N ++ + G +++ A W ++AA+ G +Q
Sbjct: 938 VKKDPDAARRYYILAAERGNAKAMHNLAVMEADGGSRGANYKSAAHWFRKAAERGVADSQ 997
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
G+ G+ E + ++ + LA G+ A ++ + ++L A S A L + +
Sbjct: 998 FNLGILYARGIGVEQNLAESFKWFSLAAAQGDQDAGRKRDDVGKKLDAQSLAAAKLAIQT 1057
Query: 329 WRAMP 333
+ P
Sbjct: 1058 FVPAP 1062
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L A++ G A Y++ L RGV N +EAA+WY RAA+ G V A++ G
Sbjct: 877 LRAAALKGDPNAAYEIGLRYAEARGVAANFEEAAKWYDRAAQAGIVPAIFRIGTLNEKGL 936
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
G+ AR++ AA+ G+ KA H L +
Sbjct: 937 GVKKDPDAARRYYILAAERGNAKAM--HNLAVM 967
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 33/132 (25%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISL 159
+ R G + G GV+K+ D A ++ A RG+ AM + +M + + ++A
Sbjct: 925 IFRIGTLNEKGLGVKKDPDAARRYYILAAERGNAKAMHNLAVMEADGGSRGANYKSAAHW 984
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+R+AA G QFNLGI Y RG GV+ NL E
Sbjct: 985 FRKAAERGVADSQFNLGILYA----------------------------RGIGVEQNLAE 1016
Query: 220 AARWY-LRAAEG 230
+ +W+ L AA+G
Sbjct: 1017 SFKWFSLAAAQG 1028
>gi|255066181|ref|ZP_05318036.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
gi|255049726|gb|EET45190.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
Length = 213
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 160 YRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
YR+AA G+ Q NLG+ Y Q +AVK +++++ G+V Q+ L + RG
Sbjct: 68 YRKAAAQGNSNAQNNLGMIYAQGYGVRRDYAQAVKFYHKSAVQGNVSGQHNLGMMYARGT 127
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV + +A RWY +AA G A YN Y G G+ S A+KW +A D G +
Sbjct: 128 GVRQDDVQAVRWYRKAAGQGSSLAQYNLGEMYFEGRGVRRSFADAQKWYSKACDNGDSRG 187
Query: 272 QLEHGLGLFTE 282
E L L E
Sbjct: 188 -CEKNLRLIPE 197
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD QF LG Y + V+ Y +A+ G+ AQ L + +G GV +
Sbjct: 39 GDAEAQFFLGAMYDIGQGVRQDYVQARKWYRKAAAQGNSNAQNNLGMIYAQGYGVRRDYA 98
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A ++Y ++A G V +N + Y+ G G+ QA +W ++AA G G + ++ LG
Sbjct: 99 QAVKFYHKSAVQGNVSGQHNLGMMYARGTGVRQDDVQAVRWYRKAA--GQGSSLAQYNLG 156
Query: 279 -LFTEG 283
++ EG
Sbjct: 157 EMYFEG 162
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
+G AQ+ L G+GV + +A +WY +AA G A N + Y+ G G+ +
Sbjct: 38 SGDAEAQFFLGAMYDIGQGVRQDYVQARKWYRKAAAQGNSNAQNNLGMIYAQGYGVRRDY 97
Query: 254 RQARKWMKRAADCGHGKAQLEHGLGLF 280
QA K+ ++A G+ Q H LG+
Sbjct: 98 AQAVKFYHKSAVQGNVSGQ--HNLGMM 122
>gi|83644132|ref|YP_432567.1| hypothetical protein HCH_01274 [Hahella chejuensis KCTC 2396]
gi|83632175|gb|ABC28142.1| FOG: TPR repeat, SEL1 subfamily [Hahella chejuensis KCTC 2396]
Length = 237
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
H AQ+ LA+ +GRG + NL++AA WY AAE G+ A N + Y+ G G+P +++
Sbjct: 55 HPDAQFLLAMMYEKGRGTEANLEKAAEWYKAAAEQGHPSAQNNLAQLYNQGRGVPQDYKE 114
Query: 256 ARKWMKRAADCGHGKAQLEHGLGL-FTEGE 284
A KW +AA G+ AQ + L L + +GE
Sbjct: 115 AVKWFSKAAGSGNATAQ--YNLALRYAKGE 142
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Query: 117 VRKN-LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDPAG 171
++KN +DKA D A + A +MY + EA A Y+ AA G P+
Sbjct: 35 IKKNDMDKAFDGLQVLANQKHPDAQFLLAMMYEKGRGTEANLEKAAEWYKAAAEQGHPSA 94
Query: 172 QFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
Q NL Y Q +EAVK +A+ +G+ AQY LAL +G GV+ NL +A
Sbjct: 95 QNNLAQLYNQGRGVPQDYKEAVKWFSKAAGSGNATAQYNLALRYAKGEGVEKNLSKAFEL 154
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
Y +AE V +N + Y+ GEG + +A +W +A+
Sbjct: 155 YRSSAEQNNVFGQFNLAYSYATGEGTDKNMVEALRWAMLSAE 196
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ GRG NL+KA + + A +G A + +Y + D KEA + + +AA
Sbjct: 66 YEKGRGTEANLEKAAEWYKAAAEQGHPSAQNNLAQLYNQGRGVPQDYKEA-VKWFSKAAG 124
Query: 166 LGDPAGQFNLGISYLQEEAVKL-------LYQASIA-GHVRAQYQLALCLHRGRGVDFNL 217
G+ Q+NL + Y + E V+ LY++S +V Q+ LA G G D N+
Sbjct: 125 SGNATAQYNLALRYAKGEGVEKNLSKAFELYRSSAEQNNVFGQFNLAYSYATGEGTDKNM 184
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYS 244
EA RW + +AE + RA+ S S
Sbjct: 185 VEALRWAMLSAEKKFPRAIQFVSFLGS 211
>gi|299531481|ref|ZP_07044887.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
gi|298720444|gb|EFI61395.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
Length = 542
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G +N AL + K A +G A+ + G +Y E A+ +R+A
Sbjct: 337 GTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRA 396
Query: 164 AVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD + QFNL G + +A+K A+ GH AQ +L + G+G
Sbjct: 397 ADKGDASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAAR 456
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ +A +WY RAAE G A YN + Y+ G+G+ + +A W AA
Sbjct: 457 DYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNARAYFWYNLAA 505
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKEA---AISLYRQA 163
G+ + G GV ++ A F K A + + G +Y + + +++ A +++A
Sbjct: 265 GRMYMDGVGVPRDYKLAASWFQKSAEQWNADGQNHLGRLYLYGLGVEQSPAYAAQWFQRA 324
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A Q+NLG Y + A++ +A+ GH A + GRGV
Sbjct: 325 ADQNHADAQYNLGTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQ 384
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N A +W+ RAA+ G A +N + Y+ G+G S QA KW AA+ GH AQ
Sbjct: 385 NYATAMQWFRRAADKGDASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRL 444
Query: 276 GLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
G+ ++ EG+ KAV + + A G+ AA + ++ Q +RD A
Sbjct: 445 GV-MYAEGQGAARDYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNA 495
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 18/180 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + HG+GV +N A F K AA+G A G +Y + +EAA Y +
Sbjct: 85 GEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGLPQNYREAA-QWYGR 143
Query: 163 AAVLGDPAGQFNLGISYLQEE----------AVKLLYQASIAGHVRAQYQLALCLHRGRG 212
AA + Q+NL S+L +E A + L +++ GHV AQ++L +G G
Sbjct: 144 AAQQSNAVAQYNL--SHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRYLKGNG 201
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V N AA W+ +AA+ G+ A S G G+ L QA +W++RAA+ G +AQ
Sbjct: 202 VAVNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQ 261
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 18/235 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G G GV+ + +A + A +G A G MY + D K AA S +++
Sbjct: 229 GSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQNSLGRMYMDGVGVPRDYKLAA-SWFQK 287
Query: 163 AAVLGDPAGQ--------FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A + GQ + LG+ A + +A+ H AQY L G G
Sbjct: 288 SAEQWNADGQNHLGRLYLYGLGVEQSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTP 347
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N A +WY +AAE G+ A+ N Y+ G G+ ++ A +W +RAAD G AQ
Sbjct: 348 QNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRAADKGDASAQFN 407
Query: 275 ----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ G + +A+ + A G + A + V+ + +RD V
Sbjct: 408 LARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAARDYGKAV 462
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
G + +G+G+ +N +A + + A + + +A + +Y E + S Q +
Sbjct: 121 GALYANGQGLPQNYREAAQWYGRAAQQSNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKS 180
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G QF LG YL+ V + Y +A+ GH AQ QL L G GV
Sbjct: 181 AAQGHVTAQFELGQRYLKGNGVAVNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKL 240
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ +AA+W RAAE G RA + Y G G+P ++ A W +++A+
Sbjct: 241 DPVQAAQWLQRAAEQGDARAQNSLGRMYMDGVGVPRDYKLAASWFQKSAE 290
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGV 213
QAA GD Q LG Y+ + V + +A+ GH AQ L G+G+
Sbjct: 71 QAAERGDAKAQNQLGEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGL 130
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
N +EAA+WY RAA+ A YN S Y G G+P S A +W++++A GH AQ
Sbjct: 131 PQNYREAAQWYGRAAQQSNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQF 190
Query: 274 EHG 276
E G
Sbjct: 191 ELG 193
>gi|395009218|ref|ZP_10392781.1| TPR repeat-containing protein [Acidovorax sp. CF316]
gi|394312755|gb|EJE49867.1| TPR repeat-containing protein [Acidovorax sp. CF316]
Length = 236
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 8/138 (5%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ ++A L +A+ AG+ + L L +G GV ++Q A + AAE G V+A
Sbjct: 71 GVGKDVKKAAALFTEAADAGYTPSMANLGLMYSKGDGVPQDMQRAQHYATLAAEKGDVQA 130
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVV 290
++ Y G G+P SH +A W ++AA+ G AQ E+GL LF +G + ++A
Sbjct: 131 QFDLGQSYRMGVGVPQSHEKAAHWYRKAAEAGSLAAQNEYGL-LFAQGHGVPQDYVQAFA 189
Query: 291 YLELATRAGETAADHVKN 308
++++ AGE A +KN
Sbjct: 190 WIDMPASAGEPQA--IKN 205
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQF 173
G+GV K++ KA F + A G T +M + GLMY + D
Sbjct: 69 GQGVGKDVKKAAALFTEAADAGYTPSMANLGLMYSKGD---------------------- 106
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
G+ + A A+ G V+AQ+ L G GV + ++AA WY +AAE G +
Sbjct: 107 --GVPQDMQRAQHYATLAAEKGDVQAQFDLGQSYRMGVGVPQSHEKAAHWYRKAAEAGSL 164
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
A L ++ G G+P + QA W+ A G +A
Sbjct: 165 AAQNEYGLLFAQGHGVPQDYVQAFAWIDMPASAGEPQA 202
>gi|51244078|ref|YP_063962.1| TPR repeat-containing protein [Desulfotalea psychrophila LSv54]
gi|50875115|emb|CAG34955.1| related to TPR repeat proteins [Desulfotalea psychrophila LSv54]
Length = 355
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 34/285 (11%)
Query: 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH------------- 113
++ +I A Q R SL KS D+ + ++A + R H
Sbjct: 33 EIAQEIQAVNAETQFRLGSLYHKSTADS-KDQQKAFSWFQKSARLGHAGAQYQLAVMYYQ 91
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
G+G K+L KA K A +G A G+MY++ D K A L ++A GD
Sbjct: 92 GKGTLKDLKKAFTWLKKSAQQGDASAQYQLGIMYYQGKGMIKDPKRAFYWL-EKSAQQGD 150
Query: 169 PAGQFNLGISYLQEEA--------VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
Q+ L Y E + + +++ GH AQ++L + +RG G + + A
Sbjct: 151 GNAQYQLAAMYHNGEGTPRSPIQELSWVEKSARQGHRAAQFRLGVMYYRGEGTPKDPKRA 210
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
W ++A G A Y + Y G+G ++A W K++A GH AQ + G ++
Sbjct: 211 LPWVEKSARQGNAMAQYQLAAMYHTGKGTLKDAKRAFFWFKKSARQGHRAAQYQLG-DMY 269
Query: 281 TEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
GE +A ++E + R G+ AA + V+ T++D
Sbjct: 270 YRGEGTLKDQERAFSWVEKSARQGDRAAQYQLAVMYYLGKGTAKD 314
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 16/219 (7%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFN 174
K+ KA F K A G A +MY++ + + A + +++A GD + Q+
Sbjct: 61 KDQQKAFSWFQKSARLGHAGAQYQLAVMYYQGKGTLKDLKKAFTWLKKSAQQGDASAQYQ 120
Query: 175 LGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
LGI Y Q + A L +++ G AQYQLA H G G + + W +
Sbjct: 121 LGIMYYQGKGMIKDPKRAFYWLEKSAQQGDGNAQYQLAAMYHNGEGTPRSPIQELSWVEK 180
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTE 282
+A G+ A + + Y GEG P ++A W++++A G+ AQ + + G T
Sbjct: 181 SARQGHRAAQFRLGVMYYRGEGTPKDPKRALPWVEKSARQGNAMAQYQLAAMYHTGKGTL 240
Query: 283 GEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
+ +A + + + R G AA + + + T +D+
Sbjct: 241 KDAKRAFFWFKKSARQGHRAAQYQLGDMYYRGEGTLKDQ 279
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
R G + G G K+ +AL K A +G+ +A MY + + A +
Sbjct: 191 FRLGVMYYRGEGTPKDPKRALPWVEKSARQGNAMAQYQLAAMYHTGKGTLKDAKRAFFWF 250
Query: 161 RQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+++A G A Q+ LG Y QE A + +++ G AQYQLA+ + G+G
Sbjct: 251 KKSARQGHRAAQYQLGDMYYRGEGTLKDQERAFSWVEKSARQGDRAAQYQLAVMYYLGKG 310
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 248
+L+ A W+ ++A+ G+ A + GEG
Sbjct: 311 TAKDLKRAFSWFEKSAKQGHRAAQRQLRVMSYKGEG 346
>gi|168233787|ref|ZP_02658845.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194471697|ref|ZP_03077681.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194458061|gb|EDX46900.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205332150|gb|EDZ18914.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 509
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRHGVPKDNKQAYIWYYMAS 452
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQ 272
AQ
Sbjct: 419 FTPAQ 423
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK+ A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALY---DKEHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVDF 215
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +F
Sbjct: 44 QKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENF 103
Query: 216 NL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 104 PLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 93/258 (36%), Gaps = 63/258 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAG-----------QFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLA 204
A + AG QF LG+ Y + V YQ A+ + AQ L
Sbjct: 154 ASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLG 213
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYV------------------------------- 233
+ G GV + ++A W G Y
Sbjct: 214 VAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKEHPADRVHSQTWYRKTAQR 273
Query: 234 ---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----M 285
+ YN + Y G L H A +W +RAA G +AQ G+ +F +GE
Sbjct: 274 VMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV-MFMQGEGVSQDY 332
Query: 286 MKAVVYLELATRAGETAA 303
+A+ + A R G AA
Sbjct: 333 QQALAWYRKAARQGLPAA 350
>gi|303289829|ref|XP_003064202.1| hypothetical protein MICPUCDRAFT_53932 [Micromonas pusilla
CCMP1545]
gi|226454518|gb|EEH51824.1| hypothetical protein MICPUCDRAFT_53932 [Micromonas pusilla
CCMP1545]
Length = 480
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-MYWEMDKKEAAISL 159
AM +L G+ ++ GRGV KN A + FLK A+ G A ++ G+ + EM + AA
Sbjct: 93 AMKML--GQLYEDGRGVEKNKSTAAEWFLKAASTGDREAQLNYGIFLDDEMGQYAAAREW 150
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ- 218
Y +AA GD NLG Y V+ + A +++ + C GV L+
Sbjct: 151 YEKAAAQGDYDAMNNLGQLYDNGRGVERNKSTAAAWYLKGALKGNPCAQNNYGVYLELER 210
Query: 219 ----EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A +WY RAA G +M N L Y G G+ + +AR+W ++A + G K++
Sbjct: 211 EQYANALKWYERAAACGNESSMCNIGLLYDEGRGVERNIAKAREWWEQAVEQGCQKSE 268
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 12/197 (6%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA----- 170
GV +N + A +K A G D G M++E+ + EAA + +AA GD
Sbjct: 38 GVEENDELARQWLVKAAELGHVGTQSDLGSMFYELSEYEAARKWWEKAAAQGDVHAMKML 97
Query: 171 GQF---NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
GQ G+ + A + +A+ G AQ + L G A WY +A
Sbjct: 98 GQLYEDGRGVEKNKSTAAEWFLKAASTGDREAQLNYGIFLDDEMG---QYAAAREWYEKA 154
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM- 286
A G AM N Y G G+ + A W + A G+ AQ +G+ L E E
Sbjct: 155 AAQGDYDAMNNLGQLYDNGRGVERNKSTAAAWYLKGALKGNPCAQNNYGVYLELEREQYA 214
Query: 287 KAVVYLELATRAGETAA 303
A+ + E A G ++
Sbjct: 215 NALKWYERAAACGNESS 231
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 170 AGQFNLGISYLQEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR-WYL 225
AG + G ++E A + L +A+ GHV Q L + + + EAAR W+
Sbjct: 29 AGHYRKGTGGVEENDELARQWLVKAAELGHVGTQSDLGSMFY-----ELSEYEAARKWWE 83
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE-GE 284
+AA G V AM Y G G+ + A +W +AA G +AQL +G+ L E G+
Sbjct: 84 KAAAQGDVHAMKMLGQLYEDGRGVEKNKSTAAEWFLKAASTGDREAQLNYGIFLDDEMGQ 143
Query: 285 MMKAVVYLELATRAGETAA 303
A + E A G+ A
Sbjct: 144 YAAAREWYEKAAAQGDYDA 162
>gi|418939835|ref|ZP_13493221.1| Peptidoglycan-binding domain 1 protein [Rhizobium sp. PDO1-076]
gi|375053443|gb|EHS49836.1| Peptidoglycan-binding domain 1 protein [Rhizobium sp. PDO1-076]
Length = 1300
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ--------AAVLGDPAGQFN 174
+ALDS AA STLA A + K AAI + AA GDP F
Sbjct: 990 QALDSNPAPAAETSTLAPPPA-------ETKAAAIVVPATITPPSLSIAAKDGDPVALFE 1042
Query: 175 LGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
+G Y EA K ++ G V AQY+LA +G GV ++ A R+Y
Sbjct: 1043 IGARYTDGRGVTSDFAEAAKWYQLSADRGFVPAQYRLANLYEKGTGVPRDIATAKRYYEM 1102
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM 286
AA G AM+N ++ ++ G + +A +W ++AA+ G +Q + L+ G +
Sbjct: 1103 AANAGNASAMHNLAVLFASGADGAQDYAKAVEWFEKAAEFGISDSQFNLAI-LYARGNGV 1161
Query: 287 KAVV-----YLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 333
K + + +A + G+ A ++ + + +RA VD W+A P
Sbjct: 1162 KQDLTASYKWFAVAAKEGDKDAAQKRDEVANAMKPDQLERARAEVDLWKAKP 1213
>gi|261251410|ref|ZP_05943984.1| hypothetical protein VIA_001429 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417952522|ref|ZP_12595581.1| Sel1 domain-containing protein [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260938283|gb|EEX94271.1| hypothetical protein VIA_001429 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342819338|gb|EGU54184.1| Sel1 domain-containing protein [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 381
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G+ +++G V ++ DKA +LK A +G+T A G +Y + K + YRQA
Sbjct: 65 GQMYEYGSEVEQDYDKAEYWYLKAAKQGNTFAQDSLGWIYQYPNSKFHKLIESTYWYRQA 124
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA--------QYQLALCLHRGRGVDF 215
A G Q +LG +Y+ +K Y+ +I+ + +A Q L +G GV
Sbjct: 125 AEQGYAPSQDSLGFAYMHGIGIKKDYKKAISWYTKASDQNYAPAQRNLGRLYEKGHGVKK 184
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ AA WY +AAE G RA + Y G G+ + A +W K+++D
Sbjct: 185 DYVIAANWYRKAAENGDGRAANYLGIMYRDGIGIQQDRQLALEWFKKSSD 234
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY---QASIAGHVRAQYQLALCLHR 209
KEA++ + A GQ S ++++ K Y +A+ G+ AQ L
Sbjct: 47 KEASVGARKGNASYQSQLGQMYEYGSEVEQDYDKAEYWYLKAAKQGNTFAQDSLGWIYQY 106
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
L E+ WY +AAE GY + + Y G G+ +++A W +A+D +
Sbjct: 107 PNSKFHKLIESTYWYRQAAEQGYAPSQDSLGFAYMHGIGIKKDYKKAISWYTKASDQNYA 166
Query: 270 KAQLEHGLGLFTEGEMMK 287
AQ G L+ +G +K
Sbjct: 167 PAQRNLGR-LYEKGHGVK 183
>gi|256424715|ref|YP_003125368.1| Sel1 domain-containing protein repeat-containing protein
[Chitinophaga pinensis DSM 2588]
gi|256039623|gb|ACU63167.1| Sel1 domain protein repeat-containing protein [Chitinophaga
pinensis DSM 2588]
Length = 211
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A Y +AA+ G Q+N+G Y + ++AV AS G AQ L C
Sbjct: 73 AFKWYMKAALQGHMESQYNVGFFYREGDVVRQNDKKAVYWFKLASAQGDTEAQRDLGYCY 132
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G++ ++ +A WY +AA +A+YN LCY G+G+ S R A+ + +RAA G
Sbjct: 133 FYGLGIEKDVTQAIFWYKKAAAKDDPKALYNLGLCYKHGDGVGQSQRWAKYYFERAARLG 192
Query: 268 HGKAQLE 274
+ A L+
Sbjct: 193 NNAASLQ 199
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+ V L + A+ G+ RAQ+ LA C G GV + A +WY++AA G++ + YN
Sbjct: 36 QIVMLWFSAASQGNKRAQFYLATCYDNGMGVQRDTAIAFKWYMKAALQGHMESQYNVGFF 95
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELA 295
Y G+ + + ++A W K A+ G +AQ + G GL E ++ +A+ + + A
Sbjct: 96 YREGDVVRQNDKKAVYWFKLASAQGDTEAQRDLGYCYFYGLGIEKDVTQAIFWYKKA 152
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G VR+N KA+ F +A+G T A D G Y+ E D + AI Y++
Sbjct: 93 GFFYREGDVVRQNDKKAVYWFKLASAQGDTEAQRDLGYCYFYGLGIEKDVTQ-AIFWYKK 151
Query: 163 AAVLGDPAGQFNLGISYLQEEAV 185
AA DP +NLG+ Y + V
Sbjct: 152 AAAKDDPKALYNLGLCYKHGDGV 174
>gi|410465884|ref|ZP_11319057.1| TPR repeat-containing protein, partial [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409981090|gb|EKO37711.1| TPR repeat-containing protein, partial [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 695
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 94/197 (47%), Gaps = 21/197 (10%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE---------EAVKLLYQASIAGHVRAQYQLALC 206
A++ YR+AA GD F LG S L + EA K QA+ G RAQ+ L L
Sbjct: 450 AVTYYREAANAGDLEAGFALG-SLLSKGLAGEPDFVEARKWYEQAAAHGDARAQFNLGLM 508
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G+G N EA RW L AA+GG A N + G G P ++A +W + AA
Sbjct: 509 YLTGKGGPVNDAEALRWMLEAAKGGDPHARSNVATMTLTGRGTPSDPKEAFRWYRLAAGQ 568
Query: 267 GHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRA-GETA----ADHVKNVILQQLSA 316
G+ +AQ G + EG ++ A+ +L LA+RA G A A K V+ ++L+
Sbjct: 569 GYAQAQAMLA-GFYYEGRVVPRDFESALFWLTLASRAPGGDALLQRAARAKAVLEKRLTP 627
Query: 317 TSRDRAMLVVDSWRAMP 333
+R + +++ P
Sbjct: 628 DQLERVSARLAAYKPAP 644
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+AV +A+ AG + A + L L +G + + EA +WY +AA G RA +N L
Sbjct: 449 KAVTYYREAANAGDLEAGFALGSLLSKGLAGEPDFVEARKWYEQAAAHGDARAQFNLGLM 508
Query: 243 YSFGEGLPLSHRQARKWMKRAADCG 267
Y G+G P++ +A +WM AA G
Sbjct: 509 YLTGKGGPVNDAEALRWMLEAAKGG 533
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 51/131 (38%), Gaps = 36/131 (27%)
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG--------------- 231
LL QA+ AG +A Y +AL G+GV N EA RW +AAE G
Sbjct: 381 LLSQAAWAGQPQAMYAMALLHLSGQGVSGNPAEAFRWCAKAAEAGVPEAKGLLAALSEEE 440
Query: 232 ------------YVRAMYNTS-LCYSFGEGLPLSHR--------QARKWMKRAADCGHGK 270
Y R N L F G LS +ARKW ++AA G +
Sbjct: 441 FPSAANLAKAVTYYREAANAGDLEAGFALGSLLSKGLAGEPDFVEARKWYEQAAAHGDAR 500
Query: 271 AQLEHGLGLFT 281
AQ GL T
Sbjct: 501 AQFNLGLMYLT 511
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYL------------QEEAVKLLYQASIAGHVRAQY 201
+AA+SL QAA GDP LG + L EA +A+ AG A
Sbjct: 158 DAALSLLGQAAKAGDPQAATALGQTMLALSEAGDRRGGTPAEAAAWFEKAAAAGEAEALT 217
Query: 202 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261
+LA GRGV + +AA +A+E G+ A Y+ L Y G+G+ +A + +
Sbjct: 218 RLAELCADGRGVPADPAKAAALRRKASEAGHAPAAYDLGLMYLSGQGVTAYPLEAARLFE 277
Query: 262 RAADCGHGKAQLEHGLGLFTEGE 284
RAA+ GH A L+ G ++ +GE
Sbjct: 278 RAAEAGHVPAMLQLG-DMYFDGE 299
>gi|171912508|ref|ZP_02927978.1| Sel1 domain protein repeat-containing protein [Verrucomicrobium
spinosum DSM 4136]
Length = 231
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A Y++AA G Q LG+ Y++ E K QAS GH AQ LA C
Sbjct: 75 AFHWYKEAAAKGYAEAQAALGLIYMKGEGTPEDYAEGAKWFRQASEQGHPVAQMNLASCY 134
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G+ +L+EAARW+ +AE A Y + Y GEG+P S+ +A KW+ +A G
Sbjct: 135 ANGHGLPRDLKEAARWFRESAERNEPMAQYYLGILYGRGEGVPQSYIEAYKWLTASAAQG 194
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 11/154 (7%)
Query: 164 AVLGDPAGQFNLGISYLQEE---------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A+ G+ A Q L I Y E A +A+ G+ AQ L L +G G
Sbjct: 46 ALAGEGAAQLALAIRYDGRERSDDHDMGKAFHWYKEAAAKGYAEAQAALGLIYMKGEGTP 105
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ E A+W+ +A+E G+ A N + CY+ G GLP ++A +W + +A+ AQ
Sbjct: 106 EDYAEGAKWFRQASEQGHPVAQMNLASCYANGHGLPRDLKEAARWFRESAERNEPMAQYY 165
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAADHVKN 308
G+ L+ GE + Y+E +AA VK
Sbjct: 166 LGI-LYGRGEGVPQ-SYIEAYKWLTASAAQGVKE 197
>gi|417511220|ref|ZP_12175893.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|353643707|gb|EHC87836.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
Length = 509
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +++ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQSIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 264
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + +++ WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQSIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVI 310
AQ G ++ G + +A ++ +A+ E + D +I
Sbjct: 419 FTPAQSALG-EIYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALI 466
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA-----ISLYRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVPQDYRQAVYWLNEGIPSSYTPGHIPLNALY---DKAHPADRVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQ+ W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQSIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF+LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|189502645|ref|YP_001958362.1| hypothetical protein Aasi_1323 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498086|gb|ACE06633.1| hypothetical protein Aasi_1323 [Candidatus Amoebophilus asiaticus
5a2]
Length = 765
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 25/178 (14%)
Query: 112 KHGRGVRK--NLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAV 165
KHG + N KA++ + +G A+ G +Y + + AI Y+ AA
Sbjct: 316 KHGCKTMEEYNEKKAVEWYKASINQGYVPALTSLGYLYQRARNIYRRYQGAIECYKIAAK 375
Query: 166 LGDPAGQFNLGISYLQEEAVKLLY----------------QASIAGHVRAQYQLALCLHR 209
GD +F+LG +Y E +++ QA+ GHV AQ QL L H
Sbjct: 376 HGDTQAKFHLGETYYYGEMTNVIHYRGVKTDYKKAFKWYSQAANEGHVEAQAQLGLMYHN 435
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW---MKRAA 264
G+ V +L ++A WY RAA+GG A + + Y G G+P QA W KRA+
Sbjct: 436 GQMVKRDLVKSAEWYKRAAKGGSEAAQIHMGMIYKKGRGVPKDLAQAIYWCMQTKRAS 493
>gi|123380240|ref|XP_001298406.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121878955|gb|EAX85476.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 494
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
++ G+G+ +NL +A F A + A GLMY + D E A YR AA
Sbjct: 119 YQLGKGIEQNLPEAAKYFRMAADQNLAAAQFCLGLMYEQGDGVEQNPEEAARYYRLAADQ 178
Query: 167 GDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q NL GI EA K + ++ +Q A L +G GV N+
Sbjct: 179 GDVDAQCNLAAMLYKGAGIPQNLREAAKYFKRGAVQNDPDSQCNYATMLLKGEGVRPNVA 238
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
EAAR++ AA+ G A + L G G L A ++ ++AAD GH AQ
Sbjct: 239 EAARYFKSAADQGLPEAQFCYGLMLETGNGERLDSEAAIRYYRKAADAGHPLAQ 292
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G +++G G +N +A + A +G A +MY E + EAA +R
Sbjct: 80 GVMYENGEGCNQNFQQAAHYYKLAADKGIAAAQNYLAIMYQLGKGIEQNLPEAA-KYFRM 138
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA A QF LG+ Y Q EEA + A+ G V AQ LA L++G G+
Sbjct: 139 AADQNLAAAQFCLGLMYEQGDGVEQNPEEAARYYRLAADQGDVDAQCNLAAMLYKGAGIP 198
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
NL+EAA+++ R A + N + GEG+ + +A ++ K AAD G +AQ
Sbjct: 199 QNLREAAKYFKRGAVQNDPDSQCNYATMLLKGEGVRPNVAEAARYFKSAADQGLPEAQFC 258
Query: 275 HGLGLFT-EGEMMK---AVVYLELATRAG 299
+GL L T GE + A+ Y A AG
Sbjct: 259 YGLMLETGNGERLDSEAAIRYYRKAADAG 287
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLH 208
S Y Q A GD QF LG+ Y E +Q A+ G AQ LA+
Sbjct: 61 FSRYLQKAEHGDTESQFYLGVMYENGEGCNQNFQQAAHYYKLAADKGIAAAQNYLAIMYQ 120
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G+G++ NL EAA+++ AA+ A + L Y G+G+ + +A ++ + AAD G
Sbjct: 121 LGKGIEQNLPEAAKYFRMAADQNLAAAQFCLGLMYEQGDGVEQNPEEAARYYRLAADQGD 180
Query: 269 GKAQ 272
AQ
Sbjct: 181 VDAQ 184
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G +Q+ L + G G + N Q+AA +Y AA+ G A ++ Y G+G+ +
Sbjct: 71 GDTESQFYLGVMYENGEGCNQNFQQAAHYYKLAADKGIAAAQNYLAIMYQLGKGIEQNLP 130
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAA 303
+A K+ + AAD AQ GL ++ +G+ + +A Y LA G+ A
Sbjct: 131 EAAKYFRMAADQNLAAAQFCLGL-MYEQGDGVEQNPEEAARYYRLAADQGDVDA 183
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 12/198 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQAAVLGDP 169
G G+ +NL +A F +GA + + + M + + ++ ++ AA G P
Sbjct: 194 GAGIPQNLREAAKYFKRGAVQNDPDSQCNYATMLLKGEGVRPNVAEAARYFKSAADQGLP 253
Query: 170 AGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
QF G+ E A++ +A+ AGH AQ LA + GRG N QEAA
Sbjct: 254 EAQFCYGLMLETGNGERLDSEAAIRYYRKAADAGHPLAQTNLAKMMRVGRGAMKNPQEAA 313
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
++ +A + + A GEG ++ + +AA+ G A + G
Sbjct: 314 NFFEKAYKSNNIEATAYFGEMKFLGEGTSKDENLGKQLILQAAEQGEPAALIWRGEFKIA 373
Query: 282 EGEMMKAVVYLELATRAG 299
+ ++ V + +A AG
Sbjct: 374 DKKIEDGVKDIRVAADAG 391
>gi|237746480|ref|ZP_04576960.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377831|gb|EEO27922.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 290
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAG 195
GL Y++ + E A + + + Q N+ YL+ E+A+ +++ G
Sbjct: 40 GLQYYQDRQFEKAWQYFSKPDAQRNSRVQRNIAYMYLKGIVVPKDSEKALYWFLKSAKQG 99
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ +A + + + G+G+ N Q A +W+L++A GY A Y L Y+ G+G+ S+ Q
Sbjct: 100 NAQAMFDIGVMYGNGQGITQNYQTARQWHLKSASKGYANAQYYLGLLYAQGDGVEQSYEQ 159
Query: 256 ARKWMKRAADCGHGKAQLEHGLGLFTEG 283
AR W RAA GH A + G LF EG
Sbjct: 160 ARFWYARAAAQGHASAIVNLG-NLFYEG 186
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 64 LPFDVLNKIAASFTLPQLRAASLVCKSWNDALRP--LREAMVLLRWGKRFKHGRGVRKNL 121
LPF L+ + T Q K+W +P R + V + G V K+
Sbjct: 26 LPFFRLSYADNASTGLQYYQDRQFEKAWQYFSKPDAQRNSRVQRNIAYMYLKGIVVPKDS 85
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ 181
+KAL FLK A +G+ AM D G+MY G+ GQ GI+
Sbjct: 86 EKALYWFLKSAKQGNAQAMFDIGVMY-------------------GN--GQ---GITQNY 121
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+ A + +++ G+ AQY L L +G GV+ + ++A WY RAA G+ A+ N L
Sbjct: 122 QTARQWHLKSASKGYANAQYYLGLLYAQGDGVEQSYEQARFWYARAAAQGHASAIVN--L 179
Query: 242 CYSFGEGLPLSHRQARKWM--KRAADCGHGKAQL 273
F EGL + +M K+AA+ G AQ
Sbjct: 180 GNLFYEGLGGEQDRVLAFMLCKKAAELGDAYAQF 213
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS-- 158
A + G + +G+G+ +N A LK A++G A GL+Y + D E +
Sbjct: 101 AQAMFDIGVMYGNGQGITQNYQTARQWHLKSASKGYANAQYYLGLLYAQGDGVEQSYEQA 160
Query: 159 --LYRQAAVLGDPAGQFNLGISYLQ----EE----AVKLLYQASIAGHVRAQYQLALCLH 208
Y +AA G + NLG + + E+ A L +A+ G AQ+ LA
Sbjct: 161 RFWYARAAAQGHASAIVNLGNLFYEGLGGEQDRVLAFMLCKKAAELGDAYAQFNLAELYR 220
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCG 267
GR N +A WY ++A+ G V+AM + + G G P++ AR+W +R AD
Sbjct: 221 TGRVTSENPGKALYWYRKSADQGTVKAMRKLATIHDRGWLGQPVNKPLAREW-ERKADAA 279
Query: 268 HGKAQLE 274
+ + E
Sbjct: 280 EARQRRE 286
>gi|123503783|ref|XP_001328599.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121911544|gb|EAY16376.1| hypothetical protein TVAG_359850 [Trichomonas vaginalis G3]
Length = 2338
Score = 68.6 bits (166), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 7/226 (3%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166
+G K+G GV K++++A F A + + + + GL+ E KE A L++++A L
Sbjct: 2085 YGLMLKNGYGVHKDIERAQKYFELSAKQNDPVGLNNLGLVLMEKGDKENATLLFKKSADL 2144
Query: 167 GDPAGQFNLGISYLQE---EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
G+ +N G+S + + E+ + ++ G+ +Q +L + L G + +L A +
Sbjct: 2145 GNIKAMYNYGLSRINDDPMESARYFQMSAEKGNSDSQLKLGMMLRSGDVLPQDLITALHY 2204
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GL 279
+ +A+ G V AM GEG + A K+ AA G+ A L +GL G
Sbjct: 2205 IVLSAKQGNVNAMCVLGRMLKQGEGTTKNPTLAAKYFLFAAKHGNNIAMLNYGLMLKDGT 2264
Query: 280 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
+ + ++V +++++ +G A +L ++R M +
Sbjct: 2265 GVDQNIEESVKFIKMSADSGNAEAQCYYATMLSNGKNIEKNREMAI 2310
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G V KN + A+ A +G+ AM G M E
Sbjct: 366 YEKGISVEKNSEMAMKYLRLSANQGNIDAMFRYGTMLRE--------------------- 404
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
GI+ +EA ++ A+ G V+A+ + L L G GV + +AA + +AA+
Sbjct: 405 ---GHGIAQNLQEAAQIFQDAAERGDVQAKNKFGLFLRNGIGVKRDYIKAASLFKQAADQ 461
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMM 286
Y A N + GEG+P + + + K++++AA+ G AQ +G +G E +
Sbjct: 462 NYAEAQNNYGVMIKLGEGVPKNSKISAKFVEKAANQGCPAAQNNYGWMLKVGYGVEKSLP 521
Query: 287 KAVVYLELATRAG 299
K+ ++ +L++ G
Sbjct: 522 KSSLFFKLSSEGG 534
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 21/227 (9%)
Query: 74 ASFTLPQLRAASL-VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALD 126
A+F L Q+ + V K+ A++ LR + + R+G + G G+ +NL +A
Sbjct: 358 ANFILSQIYEKGISVEKNSEMAMKYLRLSANQGNIDAMFRYGTMLREGHGIAQNLQEAAQ 417
Query: 127 SFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ 181
F A RG A GL + D +AA SL++QAA Q N G+
Sbjct: 418 IFQDAAERGDVQAKNKFGLFLRNGIGVKRDYIKAA-SLFKQAADQNYAEAQNNYGVMIKL 476
Query: 182 EEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
E V K + +A+ G AQ L G GV+ +L +++ ++ ++EGG
Sbjct: 477 GEGVPKNSKISAKFVEKAANQGCPAAQNNYGWMLKVGYGVEKSLPKSSLFFKLSSEGGSK 536
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
N L FG G+ + + A ++ +A G L +GL L+
Sbjct: 537 YGQNNYGLALLFGYGIKKNEKLAVQYFHDSAKQGDKYGCLNYGLCLY 583
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLY-RQ 162
+G K G GV KN + K A +G A + G M + ++K SL+ +
Sbjct: 470 YGVMIKLGEGVPKNSKISAKFVEKAANQGCPAAQNNYGWMLKVGYGVEKSLPKSSLFFKL 529
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
++ G GQ N G++ L ++ AV+ + ++ G LCL+ G G
Sbjct: 530 SSEGGSKYGQNNYGLALLFGYGIKKNEKLAVQYFHDSAKQGDKYGCLNYGLCLYEGIGCL 589
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N E ++ ++A+ G V AM+ + G G+ ++ A ++ K+AAD GH A+
Sbjct: 590 QNEIEGMKYIRKSADLGVVNAMFLFANICKDGIGVENDYKLACQYYKKAADIGHEDAKFC 649
Query: 275 HGLGL 279
+GL L
Sbjct: 650 YGLLL 654
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVK----- 186
A G AM L E + + L + AA +P QF G + ++
Sbjct: 1097 AEAGCIEAMNKLALQKKENQEINDYVDLVKTAADFDNPQSQFEYGTCLFEGRGIEQNIRQ 1156
Query: 187 ---LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
L+ +A++AG+ AQ+ +A L +G ++ +L++AA +Y AAE + A+ ++
Sbjct: 1157 GKNLIEKAAVAGNPDAQFYIAKELEKGDKIEQDLEKAAEYYGEAAENDHSGALCRLAMI- 1215
Query: 244 SFGEGLPLSHR-QARKWMKRAADCGHGKA 271
+ E P S + Q + +K AA+ G+ +A
Sbjct: 1216 NINETAPNSDKSQGYEMLKAAAEAGNPEA 1244
Score = 45.4 bits (106), Expect = 0.034, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM----YWEMDKKEAAISLYRQ 162
+G K G GV K+L K+ F + GS + GL Y ++ A+ +
Sbjct: 506 YGWMLKVGYGVEKSLPKSSLFFKLSSEGGSKYGQNNYGLALLFGYGIKKNEKLAVQYFHD 565
Query: 163 AAVLGDPAGQFNLG------ISYLQEE--AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A GD G N G I LQ E +K + +++ G V A + A G GV+
Sbjct: 566 SAKQGDKYGCLNYGLCLYEGIGCLQNEIEGMKYIRKSADLGVVNAMFLFANICKDGIGVE 625
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ + A ++Y +AA+ G+ A + L G+G S +A K++
Sbjct: 626 NDYKLACQYYKKAADIGHEDAKFCYGLLLKKGKGCEKSDAEADKYL 671
Score = 44.7 bits (104), Expect = 0.056, Method: Composition-based stats.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 11/190 (5%)
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA 199
M D L + + ++ A ++Y A +L + G+ +V A GH
Sbjct: 1955 MSDTCLHFKRLAEQGDASAMYVYALML-----RSGFGVKQDLPLSVTWFKAAGKRGHAGG 2009
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
Y L + G G N AA +Y +AA+ Y +A +N L Y G+G+ S+ A +
Sbjct: 2010 NYNAGLMIRHGIGHPSNPSHAAYYYKQAADAKYAKAAFNLGLLYLKGQGVTKSNENAAVY 2069
Query: 260 MKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 315
K AAD G +Q +GL G ++ +A Y EL+ + + + N+ L +
Sbjct: 2070 FKIAADKGDSASQANYGLMLKNGYGVHKDIERAQKYFELSAKQNDPVG--LNNLGLVLME 2127
Query: 316 ATSRDRAMLV 325
++ A L+
Sbjct: 2128 KGDKENATLL 2137
Score = 40.8 bits (94), Expect = 0.97, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 17/214 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM----YWEMDKKEA 155
+A + + + G GV+++L ++ F RG +AGLM
Sbjct: 1970 DASAMYVYALMLRSGFGVKQDLPLSVTWFKAAGKRGHAGGNYNAGLMIRHGIGHPSNPSH 2029
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A Y+QAA FNLG+ YL+ E A A+ G +Q L L
Sbjct: 2030 AAYYYKQAADAKYAKAAFNLGLLYLKGQGVTKSNENAAVYFKIAADKGDSASQANYGLML 2089
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV +++ A +++ +A+ + N L +G A K++AD G
Sbjct: 2090 KNGYGVHKDIERAQKYFELSAKQNDPVGLNNLGLVL-MEKG---DKENATLLFKKSADLG 2145
Query: 268 HGKAQLEHGLGLFTEGEMMKAVVYLELATRAGET 301
+ KA +GL + + M++ Y +++ G +
Sbjct: 2146 NIKAMYNYGLSRIND-DPMESARYFQMSAEKGNS 2178
Score = 38.5 bits (88), Expect = 4.1, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 180 LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+ + V L S G A YQL L +G V+ + Q+A + +AA+ G+V AM+
Sbjct: 848 INDNDVDSLMNGSELGLPEANYQLGLLYKKGEKVEKDEQKADEEFKKAADKGHVDAMHKH 907
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ E + +A K+ +AA+ G+ K+ +E
Sbjct: 908 AKILLENE----NESEAEKYFLKAAENGNEKSAIE 938
>gi|297171155|gb|ADI22165.1| FOG: TPR repeat, SEL1 subfamily [uncultured gamma proteobacterium
HF0200_24F15]
Length = 556
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLAL 205
E A+ ++R+ A GD Q+ LG++Y + E V K QA+ +G+V+A + L
Sbjct: 48 ETALPIWRRLAAEGDANAQYALGVAYFKGEGVSRDITESMKWFEQAAESGNVQAMFNLGA 107
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G G + EA W+ ++A G A YN L Y G+G QA KW+++AA+
Sbjct: 108 AHWEGNGTRQSYAEAVEWWEKSAAAGQSAAQYNLGLAYYLGKGTEQDLNQALKWIRQAAE 167
Query: 266 CGHGKAQ 272
H AQ
Sbjct: 168 SSHNGAQ 174
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
E A+ + + + G AQY L + +G GV ++ E+ +W+ +AAE G V+AM+N
Sbjct: 48 ETALPIWRRLAAEGDANAQYALGVAYFKGEGVSRDITESMKWFEQAAESGNVQAMFNLGA 107
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF----TEGEMMKAVVYLELATR 297
+ G G S+ +A +W +++A G AQ GL + TE ++ +A+ ++ A
Sbjct: 108 AHWEGNGTRQSYAEAVEWWEKSAAAGQSAAQYNLGLAYYLGKGTEQDLNQALKWIRQAAE 167
Query: 298 AGETAADHVKNVILQQLS 315
+ A V +I ++L+
Sbjct: 168 SSHNGAQEVLVIIEKELA 185
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 24/125 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV +++ +++ F + A G+ AM + G +WE + RQ
Sbjct: 70 GVAYFKGEGVSRDITESMKWFEQAAESGNVQAMFNLGAAHWEGNGT-------RQ----- 117
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
SY EAV+ +++ AG AQY L L + G+G + +L +A +W +A
Sbjct: 118 ----------SYA--EAVEWWEKSAAAGQSAAQYNLGLAYYLGKGTEQDLNQALKWIRQA 165
Query: 228 AEGGY 232
AE +
Sbjct: 166 AESSH 170
>gi|395507833|ref|XP_003758223.1| PREDICTED: protein sel-1 homolog 2 [Sarcophilus harrisii]
Length = 685
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 13/220 (5%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGDP 169
+G+ ++ KAL FLK A GST AM G MY E + A + AA G+
Sbjct: 311 KGLEQDFYKALYYFLKAAKAGSTNAMAFLGKMYLEGNPAVPQNNVTAFKYFSMAANKGNA 370
Query: 170 AGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
G LG+ Y +EA+KL +A+ G AQYQL + G GV + + A
Sbjct: 371 IGLHGLGLIYFHGKGVPVDYDEALKLFQKAAEKGWPNAQYQLGFMYYSGSGVWKDYKLAF 430
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
+++ A++ G A+Y + Y+ G G+ S R A + K + G + +
Sbjct: 431 KYFYLASQSGQPLAIYYLAEMYASGTGVLRSCRTAVELYKGVCELGRWAEKFLTAYFAYK 490
Query: 282 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
+G++ +++ L G A IL+ AT ++
Sbjct: 491 DGDINSSLIQYALLAEMGYEVAQSNSAFILESQKATILEK 530
>gi|237745400|ref|ZP_04575881.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229378866|gb|EEO28957.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 271
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
FK GR +A+ +K A+ A+ G +Y E E A YR+AA +
Sbjct: 32 FKAGR-----YQEAMSYLMKPDAQRDAKAVNLVGYLYDEGLGVAKNAEVANQWYRKAAEM 86
Query: 167 GDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G QFNLG+SY + EAVK +A+ + +A+ ++ G GV + +
Sbjct: 87 GFAKAQFNLGLSYQYGSGVSKDESEAVKWFRKAAEQKYFKAESKMGYLTAEGIGVKQDYK 146
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
EA +WY RAAE G A + L Y GEG+ QA ++ A+ G+G+AQL
Sbjct: 147 EAMKWYRRAAEHGDHGAYADIGLFYDKGEGVTKDPNQAVQYYILGAEKGNGRAQL 201
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKAL 125
+A +LV +++ L + A V +W G +++G GV K+ +A+
Sbjct: 54 KAVNLVGYLYDEGLGVAKNAEVANQWYRKAAEMGFAKAQFNLGLSYQYGSGVSKDESEAV 113
Query: 126 DSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYL 180
F K A + A G + E D KEA + YR+AA GD ++G+ Y
Sbjct: 114 KWFRKAAEQKYFKAESKMGYLTAEGIGVKQDYKEA-MKWYRRAAEHGDHGAYADIGLFYD 172
Query: 181 QEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
+ E AV+ + G+ RAQ LA C +G G+ + + A WY AA+ G
Sbjct: 173 KGEGVTKDPNQAVQYYILGAEKGNGRAQLFLADCYAKGNGIRQDNERALHWYREAAKNGN 232
Query: 233 VRAMYNTSLCYSFGE-GLPLSHRQARKWMKRA 263
V AM + Y+ G G+ + ++++W++ A
Sbjct: 233 VMAMQELAAIYAKGRLGVRKNEAESQRWLEMA 264
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 175 LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
LG++ E A + +A+ G +AQ+ L L G GV + EA +W+ +AAE Y +
Sbjct: 67 LGVAKNAEVANQWYRKAAEMGFAKAQFNLGLSYQYGSGVSKDESEAVKWFRKAAEQKYFK 126
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAV 289
A + G G+ +++A KW +RAA+ G A + GL + +GE + +AV
Sbjct: 127 AESKMGYLTAEGIGVKQDYKEAMKWYRRAAEHGDHGAYADIGL-FYDKGEGVTKDPNQAV 185
Query: 290 VYLELATRAG 299
Y L G
Sbjct: 186 QYYILGAEKG 195
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+EA+ L + +A + G GV N + A +WY +AAE G+ +A +N L
Sbjct: 38 QEAMSYLMKPDAQRDAKAVNLVGYLYDEGLGVAKNAEVANQWYRKAAEMGFAKAQFNLGL 97
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
Y +G G+ +A KW ++AA+ + KA+ + G L EG
Sbjct: 98 SYQYGSGVSKDESEAVKWFRKAAEQKYFKAESKMGY-LTAEG 138
>gi|269468898|gb|EEZ80485.1| hypothetical protein Sup05_0100 [uncultured SUP05 cluster
bacterium]
Length = 187
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLYRQAAVLGDPAGQ---- 172
AL F+ A +G+T A + GLM+ +M+K AI + +AA GD Q
Sbjct: 12 ALKEFVPLAKKGNTKAQLSLGLMHQYGTGLPVDMNK---AIQWFLKAAHGGDKIAQSWLA 68
Query: 173 ----FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
F G+ EA K +A+ GH +Q L L G+G++ + +++ WY AA
Sbjct: 69 MMYTFGNGVPLDNTEAFKWFSKAANQGHPSSQDMLGLMYQSGKGIEVDYKKSFYWYNLAA 128
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
G+ +A +N + Y+ G G+ + +A KW ++AD G+ A
Sbjct: 129 NQGHAQAQFNLAEMYAKGLGVEMDKNKALKWHSKSADQGYSDA 171
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ +AQ L L G G+ ++ +A +W+L+AA GG A ++ Y+FG G+PL +
Sbjct: 23 GNTKAQLSLGLMHQYGTGLPVDMNKAIQWFLKAAHGGDKIAQSWLAMMYTFGNGVPLDNT 82
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
+A KW +AA+ GH +Q GL G E + K+ + LA G A
Sbjct: 83 EAFKWFSKAANQGHPSSQDMLGLMYQSGKGIEVDYKKSFYWYNLAANQGHAQA 135
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISL 159
L G ++G G+ +++KA+ FLK A G +A +MY +D EA
Sbjct: 29 LSLGLMHQYGTGLPVDMNKAIQWFLKAAHGGDKIAQSWLAMMYTFGNGVPLDNTEA-FKW 87
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGR 211
+ +AA G P+ Q LG+ Y + +++ Y+ S GH +AQ+ LA +G
Sbjct: 88 FSKAANQGHPSSQDMLGLMYQSGKGIEVDYKKSFYWYNLAANQGHAQAQFNLAEMYAKGL 147
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAM 236
GV+ + +A +W+ ++A+ GY A+
Sbjct: 148 GVEMDKNKALKWHSKSADQGYSDAI 172
>gi|363540752|ref|YP_004895098.1| mg1047 gene product [Megavirus chiliensis]
gi|350611917|gb|AEQ33361.1| putative Sel1-like repeat-containing protein [Megavirus chiliensis]
Length = 570
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 14/194 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+ KA + A +G + A + G Y + +K E AI ++++ G
Sbjct: 112 GFMYEEDIGIIGKTKKAKKWYALSANQGLSFAQYNLGYYYIKKNKYEKAIDCFQKSMQSG 171
Query: 168 DPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
+ L +YL+ ++A+KL ++ G++ +QY+L + + G + N+ EA
Sbjct: 172 CYVSNYMLAETYLKLSVPNHDQAIKLFTISANKGYIYSQYRLGILYYDGIHIPININEAI 231
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG--- 278
+W+L AA G + + Y G+ + + QA KW K + G+ A E+GLG
Sbjct: 232 KWFLMAANQGCDMSQNKLGVIYFEGKHINVDINQAYKWFKLSTKQGNYFA--EYGLGRVY 289
Query: 279 ---LFTEGEMMKAV 289
FT+ KA+
Sbjct: 290 DSKYFTKYNCQKAI 303
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFN 174
N D+A+ F A +G + G++Y++ ++ EA I + AA G Q
Sbjct: 190 NHDQAIKLFTISANKGYIYSQYRLGILYYDGIHIPININEA-IKWFLMAANQGCDMSQNK 248
Query: 175 LGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
LG+ Y + +A K ++ G+ A+Y L +N Q+A Y++
Sbjct: 249 LGVIYFEGKHINVDINQAYKWFKLSTKQGNYFAEYGLGRVYDSKYFTKYNCQKAINCYIK 308
Query: 227 AAEGGYV 233
AA GY+
Sbjct: 309 AANNGYI 315
>gi|221068950|ref|ZP_03545055.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220713973|gb|EED69341.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 542
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKEA---AISLYRQA 163
G+ + G GV ++ A F K A + + G +Y + + +++ A +++A
Sbjct: 265 GRMYMDGVGVPRDYKLAASWFQKSAEQWNADGQNHLGRLYLYGLGVEQSPAYAAQWFQRA 324
Query: 164 AVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A Q+NLG Y + A++ +A+ GH A + GRGV
Sbjct: 325 ADQNHADAQYNLGTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVPQ 384
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N A +W+ RAA+ G A +N + Y+ G+G S QA KW AA+ GH AQ
Sbjct: 385 NYATAMQWFRRAADKGDASAQFNLARLYADGQGGAASPAQAMKWYAAAAEQGHSGAQNRL 444
Query: 276 GLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
G+ ++ EG+ KAV + + A G+ AA + ++ Q +RD A
Sbjct: 445 GV-MYAEGQGAARDYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNA 495
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G +N AL + K A +G A+ + G +Y E A+ +R+A
Sbjct: 337 GTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVPQNYATAMQWFRRA 396
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD + QFNL Y +A+K A+ GH AQ +L + G+G
Sbjct: 397 ADKGDASAQFNLARLYADGQGGAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAAR 456
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ +A +WY RAAE G A YN + Y+ G+G+ + +A W AA
Sbjct: 457 DYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNARAYFWYNLAA 505
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 20/236 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G G GV+ + +A + A +G A G MY + D K AA S +++
Sbjct: 229 GSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQNSLGRMYMDGVGVPRDYKLAA-SWFQK 287
Query: 163 AAVLGDPAGQ--------FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A + GQ + LG+ A + +A+ H AQY L G G
Sbjct: 288 SAEQWNADGQNHLGRLYLYGLGVEQSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTP 347
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N A +WY +AAE G+ A+ N Y+ G G+P ++ A +W +RAAD G AQ
Sbjct: 348 QNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVPQNYATAMQWFRRAADKGDASAQFN 407
Query: 275 HGLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
L+ +G+ +A+ + A G + A + V+ + +RD V
Sbjct: 408 LAR-LYADGQGGAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAARDYGKAV 462
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + HG+GV +N A F K AA+G A G +Y + +EAA Y +
Sbjct: 85 GEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGLPQNYREAA-QWYGR 143
Query: 163 AAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA + Q+NL G+ A + L +++ GHV AQ++L +G GV
Sbjct: 144 AAQQNNAVAQYNLSHLYQDGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRYLKGNGVA 203
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
N AA W+ +AA+ G+ +A S G G+ L QA +W++RAA+ G +AQ
Sbjct: 204 VNYMTAADWFKKAADQGHAQAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQ 261
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
G + +G+G+ +N +A + + A + + +A + +Y + + S Q +
Sbjct: 121 GALYANGQGLPQNYREAAQWYGRAAQQNNAVAQYNLSHLYQDGLGVPQSFSTAAQWLEKS 180
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G QF LG YL+ V + Y +A+ GH +AQ QL L G GV
Sbjct: 181 AAQGHVTAQFELGQRYLKGNGVAVNYMTAADWFKKAADQGHAQAQNQLGSMLSDGVGVKL 240
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ +AA+W RAAE G RA + Y G G+P ++ A W +++A+
Sbjct: 241 DPVQAAQWLQRAAEQGDARAQNSLGRMYMDGVGVPRDYKLAASWFQKSAE 290
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGV 213
QAA GD Q LG Y+ + V + +A+ GH AQ L G+G+
Sbjct: 71 QAAERGDAKAQNQLGEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGL 130
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
N +EAA+WY RAA+ A YN S Y G G+P S A +W++++A GH AQ
Sbjct: 131 PQNYREAAQWYGRAAQQNNAVAQYNLSHLYQDGLGVPQSFSTAAQWLEKSAAQGHVTAQF 190
Query: 274 EHG 276
E G
Sbjct: 191 ELG 193
>gi|429753148|ref|ZP_19285964.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429174242|gb|EKY15724.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 807
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 27/199 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EA ++ G+ + +G+GV ++ KA++ F K AA+G+ A+ Y
Sbjct: 213 EAQAMI--GESYLNGKGVEQSESKAIEWFEKAAAKGNATALYHLANFY-----------F 259
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
Y + ++G ++A+ QA+ G+V AQ QLA+CL+ G G + ++
Sbjct: 260 YGNSPLIGK-----------FPKKALDYYTQAANKGNVDAQRQLAVCLYNGIGGTASQRD 308
Query: 220 AARWYLRAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
A W L+A N ++CY+ G G S QA + ++AAD G AQ G
Sbjct: 309 AFNWILKAVNANPSPITENNLAVCYATGNGTRQSVAQAVELFRKAADAGDVAAQYNLGAL 368
Query: 279 LFTEG--EMMKAVVYLELA 295
L E ++ KA YLE A
Sbjct: 369 LLEEPQQDVKKAFEYLEKA 387
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F ++Y Q+ +VK L + + G V+AQ +LA +G+GV + Q+AA W + AE G
Sbjct: 11 FLASLAYGQDTSVKKLMKLAEKGDVKAQSELAEAYLKGKGVKRSFQDAALWLEKVAETGD 70
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A Y + + G+G+P S + +W+ +AA+ G+ KA+ E L
Sbjct: 71 AQAQYQLAHLHLDGKGMPKSEEKGTEWLAKAAENGNQKAEQELAL 115
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+AV +A+ + QY+L C + G G++ + ++AA +Y RAA GY A + C
Sbjct: 708 QAVTQYQKAAHREYAEGQYKLGNCYYNGSGLERSNEKAADYYKRAARQGYAPAQFRLGNC 767
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKA 271
Y GEG+ S +A W +A D G +A
Sbjct: 768 YYHGEGIQQSDTRAIDWFDQACDSGEKQA 796
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q L +YL+ + VK +Q + G +AQYQLA G+G+ + +
Sbjct: 33 GDVKAQSELAEAYLKGKGVKRSFQDAALWLEKVAETGDAQAQYQLAHLHLDGKGMPKSEE 92
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ W +AAE G +A +LCY G G+P S + W+++ AD
Sbjct: 93 KGTEWLAKAAENGNQKAEQELALCYRDGRGVPQSTEKYYAWIEKNAD 139
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 24/137 (17%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE------EAVKLLYQASIAGHVRAQYQLALCLHR 209
A+ L+R+AA GD A Q+NLG L+E +A + L +A+ H+ A +L
Sbjct: 346 AVELFRKAADAGDVAAQYNLGALLLEEPQQDVKKAFEYLEKAAAQNHLLALKKLGDLNFT 405
Query: 210 GRGVDFNLQEAARWYLRAAE------------------GGYVRAMYNTSLCYSFGEGLPL 251
G+ + + A +Y +AA+ Y ++ S CY+ G+G+
Sbjct: 406 GKYTNQSYTRAFEYYNKAAKLTPTPENQMLDYFYQGQADAYADVLFTLSQCYADGKGVKK 465
Query: 252 SHRQARKWMKRAADCGH 268
S +A KW +AAD H
Sbjct: 466 SPHEAAKWAMKAADLSH 482
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLA 204
++AA+ L + A GD Q+ L G+ +E+ + L +A+ G+ +A+ +LA
Sbjct: 56 QDAALWL-EKVAETGDAQAQYQLAHLHLDGKGMPKSEEKGTEWLAKAAENGNQKAEQELA 114
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
LC GRGV + ++ W + A+ + + + Y G+G+ +A+ W +AA
Sbjct: 115 LCYRDGRGVPQSTEKYYAWIEKNADKEKAETLLDLAKAYYAGDGVTKDVNKAKFWADKAA 174
Query: 265 DCGHGKAQL 273
G+ +A+L
Sbjct: 175 KKGNKEAEL 183
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYR----QAAVL 166
++ GRGV ++ +K K A + ++D Y+ D ++ + +AA
Sbjct: 117 YRDGRGVPQSTEKYYAWIEKNADKEKAETLLDLAKAYYAGDGVTKDVNKAKFWADKAAKK 176
Query: 167 GDPAGQFNLG-----ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
G+ + L I+ EA++ L Q + G AQ + G+GV+ + +A
Sbjct: 177 GNKEAELLLATWVYEINPSNPEAIQRLMQVAEKGDTEAQAMIGESYLNGKGVEQSESKAI 236
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK---WMKRAADCGHGKAQLEHGLG 278
W+ +AA G A+Y+ + Y +G PL + +K + +AA+ G+ AQ + +
Sbjct: 237 EWFEKAAAKGNATALYHLANFYFYGNS-PLIGKFPKKALDYYTQAANKGNVDAQRQLAVC 295
Query: 279 LFT 281
L+
Sbjct: 296 LYN 298
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 274
+A Y +AA Y Y CY G GL S+ +A + KRAA G+ AQ
Sbjct: 708 QAVTQYQKAAHREYAEGQYKLGNCYYNGSGLERSNEKAADYYKRAARQGYAPAQFRLGNC 767
Query: 275 --HGLGLFTEGEMMKAVVYLELATRAGETAA 303
HG G+ + +A+ + + A +GE A
Sbjct: 768 YYHGEGI--QQSDTRAIDWFDQACDSGEKQA 796
>gi|399910565|ref|ZP_10778879.1| Putative TPR repeat protein [Halomonas sp. KM-1]
Length = 296
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 28/248 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
EA LL G + G+GV ++ +A + + + A G+ +A + MY E D +E
Sbjct: 57 EAQSLL--GGMYLRGQGVTQDFLQAAEWYRRSAELGNPIAQNNLAWMYEVGRGVEQDYQE 114
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALC 206
A + YR +A G Q NLG+ + EA K ++ G ++Q L
Sbjct: 115 A-MKWYRLSAEEGMAGAQQNLGLMFFYGRGSSVNYSEAAKWFRLSAGQGLAKSQEYLGNM 173
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
+ G GV + +E+ARW+ AAE G V + Y + + GEG+P A +W +AA+
Sbjct: 174 YYYGAGVSADYEESARWFRLAAEQGEVTSQYQLGVLHMNGEGVPQDDVIAAEWFYKAAEQ 233
Query: 267 GHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G AQ E+G G+ E +AV + +A + G A V L +L+ + +
Sbjct: 234 GDDHAQYNLGAMYENGWGVSQNYE--EAVKWYAMAAQQGLKEAQEV----LLELAESGVE 287
Query: 321 RAMLVVDS 328
A+++V++
Sbjct: 288 AAVVIVNA 295
>gi|401827984|ref|XP_003888284.1| Sel1 repeat domain-containing protein [Encephalitozoon hellem ATCC
50504]
gi|392999556|gb|AFM99303.1| Sel1 repeat domain-containing protein [Encephalitozoon hellem ATCC
50504]
Length = 588
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G F G GV KN + A++ F + + + A+ + G Y E E A +Y+ +
Sbjct: 174 GYCFLKGFGVEKNEEIAVELFRYASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYKLS 233
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
+ + + Q LG Y + ++A + ++++ G+ Q LA C +G G
Sbjct: 234 SKMENSYAQNALGNCYEEGKGVDRDFQKAFEFYKKSALQGYPSGQCNLAFCYQKGIGTKK 293
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA--DCGHGKAQL 273
LQ+A WY RAA G RA +N CY G G +A W K++A + H L
Sbjct: 294 CLQKAFEWYKRAAMQGLSRAKHNIGYCYQNGLGTSRCMSKAIYWYKQSASENNKHSIHAL 353
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAG 299
+HG G+ + E+ AV Y +AG
Sbjct: 354 GVCYQHGYGVPKDEEL--AVRYFNEGAKAG 381
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-E 154
+++ L G ++ GRGV +NL KA + + + ++ A G Y E +D+ +
Sbjct: 201 KDSTALYNIGFCYEEGRGVERNLIKAFEMYKLSSKMENSYAQNALGNCYEEGKGVDRDFQ 260
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALC 206
A Y+++A+ G P+GQ NL Y + ++A + +A++ G RA++ + C
Sbjct: 261 KAFEFYKKSALQGYPSGQCNLAFCYQKGIGTKKCLQKAFEWYKRAAMQGLSRAKHNIGYC 320
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G G + +A WY ++A +++ +CY G G+P A ++ A
Sbjct: 321 YQNGLGTSRCMSKAIYWYKQSASENNKHSIHALGVCYQHGYGVPKDEELAVRYFNEGAKA 380
Query: 267 GHGKA 271
G +A
Sbjct: 381 GFDEA 385
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 82/208 (39%), Gaps = 48/208 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G ++HG GV K+ + A+ F +GA G A++ L Y E + SL ++A
Sbjct: 354 GVCYQHGYGVPKDEELAVRYFNEGAKAGFDEAIISLALCYRSGTGVRISPEKSFSLMKRA 413
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAV------------------------------ 185
A + + + Q LG Y + +EAV
Sbjct: 414 AEMNNSSAQNTLGYYYEEGFGTSRNIKEAVRWYETSAKQDNSWALFNLSSLYFNGAHGPP 473
Query: 186 ------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
KLL ++ G+ RA L C +G GV+ N + A Y +A GY +A YN
Sbjct: 474 DEKLGVKLLSRSRDLGNPRAANTLGYCFEKGIGVEKNPKLAFEHYTQALMNGYSKAGYNL 533
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCG 267
CY G G + +A + RA+ G
Sbjct: 534 GRCYENGIGTGIDIDKALYYFYRASSAG 561
>gi|421623956|ref|ZP_16064834.1| Sel1 repeat protein [Acinetobacter baumannii OIFC098]
gi|408702468|gb|EKL47878.1| Sel1 repeat protein [Acinetobacter baumannii OIFC098]
Length = 302
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G G KN KALD + K AA+ + A G++Y E D K+A Y +
Sbjct: 121 GAYYANGDGGVKNYQKALDWYSKAAAQDNAEAKYYLGILYEEGYGVTQDYKKA-FEWYSK 179
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKL-------LY-QASIAGHVRAQYQLALCLHRGRGVD 214
AA Q NL Y Q + V+L LY +A+ G+ +AQ L G GV+
Sbjct: 180 AAAQNYADAQNNLAALYAQGKGVELNNKKAFELYSKAAEQGNEKAQNNLGAIYALGIGVN 239
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AA+ A + + Y GEG+ ++ A KW+++AA+ G+ A
Sbjct: 240 QDYKKAFEWYSKAAQQENDEAQFTVGMMYYKGEGVQQNNELAEKWLRKAAENGNKDA--- 296
Query: 275 HGLGLFTE 282
L LF E
Sbjct: 297 --LSLFEE 302
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q LG Y++ + V Y+ A+ G+ AQ L G+GV+ N +
Sbjct: 40 GDAGAQAKLGELYVEGQVVPQDYKKAFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNYK 99
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G V+A N Y+ G+G ++++A W +AA + +A+ G+
Sbjct: 100 KAFEWYSKAAEQGEVKAQNNLGAYYANGDGGVKNYQKALDWYSKAAAQDNAEAKYYLGI- 158
Query: 279 LFTEG 283
L+ EG
Sbjct: 159 LYEEG 163
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCL 207
A Y +AA G+ Q NLG Y + V+ Y+ A+ G V+AQ L
Sbjct: 65 AFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNYKKAFEWYSKAAEQGEVKAQNNLGAYY 124
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G N Q+A WY +AA A Y + Y G G+ +++A +W +AA
Sbjct: 125 ANGDGGVKNYQKALDWYSKAAAQDNAEAKYYLGILYEEGYGVTQDYKKAFEWYSKAAAQN 184
Query: 268 HGKAQLEHGLGLFTEGE--MMKAVVYLELATRAGETAADHVKNVI 310
+ AQ + L+ +G+ + EL ++A E + +N +
Sbjct: 185 YADAQ-NNLAALYAQGKGVELNNKKAFELYSKAAEQGNEKAQNNL 228
>gi|429755968|ref|ZP_19288584.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429172225|gb|EKY13799.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 278
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F G+SY Q E K L + + G + AQ +LA +G GV + +A WY +AAE G
Sbjct: 27 FFFGMSYAQREDFKTLIEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAEQGD 86
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
V++ LCY + +G+ S+ +A W ++AA+ G+ +AQ + G+
Sbjct: 87 VKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV 131
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCL 207
A++ Y +AA GD Q LG+ Y + V Y+ A+ G+ AQ +L +C
Sbjct: 74 AVAWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCY 133
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
H+G+GV + ++A W+ +AA+ + A CY G G+ S A W ++AA+ G
Sbjct: 134 HKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQG 193
Query: 268 HGKAQLEHGLGLF----TEGEMMKAVVYLELATRAGETAADHV 306
+AQ G F KA+ + E A G+ A +
Sbjct: 194 DVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTI 236
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+ A GD Q L +Y + +AV +A+ G V++Q +L LC + +GV
Sbjct: 44 EKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLCYYYRKGV 103
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ ++AA W+ +AAE GY A +CY G+G+ S QA W ++AAD +AQ
Sbjct: 104 VQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQS 163
Query: 274 EHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
G GL AV++ E A G+ A
Sbjct: 164 FLGYCYYKGLGVAQSDSDAVLWYEKAANQGDVEA 197
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 77/206 (37%), Gaps = 48/206 (23%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
+R ++ G GV ++ KA+ + K A +G + GL Y+ + E A +
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWF 114
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA G Q LG+ Y + E+AV +A+ AQ L C ++G G
Sbjct: 115 QKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLG 174
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTS-------------------------------- 240
V + +A WY +AA G V A N
Sbjct: 175 VAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQ 234
Query: 241 ----LCYSFGEGLPLSHRQARKWMKR 262
CY G G+ S ++A W ++
Sbjct: 235 TILGFCYYAGTGVDKSQKRAIYWFEK 260
>gi|445129100|ref|ZP_21380648.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|444854410|gb|ELX79474.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
Length = 457
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCG 267
GRGV N + A +WYL+AAE G A Y+ G +G+P ++QA W A+ G
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGVTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYG 455
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 419 VTPAQLALG 427
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+ +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVSQDYRQAVYWLNE 235
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 213 GVAYFYGEGVSQDYRQAVYWLNEGIPSSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 269
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 270 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 329
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 330 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 389
Query: 275 HGLGLFT 281
G+ T
Sbjct: 390 LGVAYST 396
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +
Sbjct: 43 EQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 102
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 103 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 154
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 39 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 98
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 99 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 158
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 159 D--AGVVRGQGSASS 171
>gi|213963117|ref|ZP_03391375.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
sputigena Capno]
gi|213954201|gb|EEB65525.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
sputigena Capno]
Length = 810
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 27/199 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EA ++ G+ + +G+GV ++ KA++ F K AA+G+ A+ Y
Sbjct: 213 EAQAMI--GESYLNGKGVEQSESKAIEWFEKAAAKGNATALYHLANFY-----------F 259
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
Y + ++G ++A+ QA+ G+V AQ QLA+CL+ G G + ++
Sbjct: 260 YGNSPLIGK-----------FPKKALDYYTQAANKGNVDAQRQLAVCLYNGIGGAASQRD 308
Query: 220 AARWYLRAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
A W L+A N ++CY+ G G S QA + ++AAD G AQ G
Sbjct: 309 AFNWILKAVNANPSPITENNLAVCYATGNGTRQSVAQAVELFRKAADAGDVTAQYNLGTL 368
Query: 279 LFTEG--EMMKAVVYLELA 295
L E ++ KA YLE A
Sbjct: 369 LLEEPQQDVKKAFEYLEKA 387
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F ++Y Q+ +VK L + + G V+AQ +LA +G+GV + Q+AA W + AE G
Sbjct: 11 FLASLAYGQDSSVKKLMKLAEKGDVKAQSELAEAYLKGKGVKRSFQDAALWLEKVAETGD 70
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+A Y + + G+G+P S + +W+ +AA+ G+ KA+ E L
Sbjct: 71 AQAQYQLAHLHLDGKGMPKSEEKGAEWLAKAAENGNQKAEQELAL 115
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+AV +A+ + QY+L C + G G++ + ++AA +Y RAA GY A + C
Sbjct: 711 QAVTQYQKAAHREYAEGQYKLGNCYYNGSGLERSNEKAADYYKRAARQGYAPAQFRLGNC 770
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKA 271
Y GEG+ S +A W +A D G +A
Sbjct: 771 YYHGEGIQQSDARAIDWFDQACDSGEKQA 799
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q L +YL+ + VK +Q + G +AQYQLA G+G+ + +
Sbjct: 33 GDVKAQSELAEAYLKGKGVKRSFQDAALWLEKVAETGDAQAQYQLAHLHLDGKGMPKSEE 92
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 274
+ A W +AAE G +A +LCY G G+ S + W+++ AD + L+
Sbjct: 93 KGAEWLAKAAENGNQKAEQELALCYRDGRGVAQSTEKYYAWIEKNADNEKAETLLDLAKA 152
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G ++ KA + E A + G AD + + + + ++ D
Sbjct: 153 YYAGDGVTKDVNKAKFWAEKAAKKGSKDADFLLATWVYETNPSNPD 198
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 24/137 (17%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE------EAVKLLYQASIAGHVRAQYQLALCLHR 209
A+ L+R+AA GD Q+NLG L+E +A + L +A+ H+ A +L
Sbjct: 346 AVELFRKAADAGDVTAQYNLGTLLLEEPQQDVKKAFEYLEKAAAQNHLLALKKLGDLNFT 405
Query: 210 GRGVDFNLQEAARWYLRAAE------------------GGYVRAMYNTSLCYSFGEGLPL 251
G+ + + A +Y +AA+ Y ++ S CY+ G+G+
Sbjct: 406 GKYTNQSYARAFEYYNKAAKLTPTPENQMLDYFYQGQADAYADVLFTLSQCYADGKGVKK 465
Query: 252 SHRQARKWMKRAADCGH 268
S R+A KW +AAD H
Sbjct: 466 SPREAAKWAMKAADLSH 482
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 33/187 (17%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA-MVDAGLMYWEMDKKEAAI 157
+A LL K + G GV K+++KA K A +GS A + A +Y I
Sbjct: 141 EKAETLLDLAKAYYAGDGVTKDVNKAKFWAEKAAKKGSKDADFLLATWVYETNPSNPDGI 200
Query: 158 SLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
Q A GD Q +G SYL G+GV+ +
Sbjct: 201 QRLMQVAEKGDAEAQAMIGESYL----------------------------NGKGVEQSE 232
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK---WMKRAADCGHGKAQLE 274
+A W+ +AA G A+Y+ + Y +G PL + +K + +AA+ G+ AQ +
Sbjct: 233 SKAIEWFEKAAAKGNATALYHLANFYFYGNS-PLIGKFPKKALDYYTQAANKGNVDAQRQ 291
Query: 275 HGLGLFT 281
+ L+
Sbjct: 292 LAVCLYN 298
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A Y +AA Y Y CY G GL S+ +A + KRAA G+ AQ G
Sbjct: 711 QAVTQYQKAAHREYAEGQYKLGNCYYNGSGLERSNEKAADYYKRAARQGYAPAQFRLG-N 769
Query: 279 LFTEGEMM-----KAVVYLELATRAGETAA 303
+ GE + +A+ + + A +GE A
Sbjct: 770 CYYHGEGIQQSDARAIDWFDQACDSGEKQA 799
>gi|421498702|ref|ZP_15945791.1| Sel1 protein repeat-containing protein [Aeromonas media WS]
gi|407182289|gb|EKE56257.1| Sel1 protein repeat-containing protein [Aeromonas media WS]
Length = 349
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 105/250 (42%), Gaps = 56/250 (22%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G F+ G+GV ++ +A + K A +G+ A + G MY + + A++ YR+A
Sbjct: 52 GFMFEMGQGVPQDNQQAAIWYRKAAEQGNADAQSNLGAMYAQGRGVPQDDQQAVAWYRKA 111
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
G+ Q NLG Y + V+ Y ++A G AQY LAL + G GV
Sbjct: 112 VEQGNAITQCNLGAMYYDGKGVEQDYAQAMAWFRKAAEQGDADAQYNLALMYYNGEGVPQ 171
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP------------------------- 250
+ Q+A WY +AA A Y +L Y+ GEG+P
Sbjct: 172 DNQQAVAWYSQAARQRNAAAQYALALMYANGEGVPQDNQLALTWYRQAAGQGNAAAQCKL 231
Query: 251 -----------LSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLE 293
L + QA W ++AA+ GH AQ HGLG+ + + +AV +
Sbjct: 232 GEMNEMGQGVRLDYAQAVAWYRKAAEQGHADAQTSLGSMYAHGLGVPQDDQ--QAVAWYR 289
Query: 294 LATRAGETAA 303
A G +A
Sbjct: 290 KAAEQGNASA 299
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 97/232 (41%), Gaps = 51/232 (21%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA 155
A+ G + G+GV ++ +A+ F K A +G A + LMY+ D ++A
Sbjct: 117 AITQCNLGAMYYDGKGVEQDYAQAMAWFRKAAEQGDADAQYNLALMYYNGEGVPQDNQQA 176
Query: 156 -----------------------------------AISLYRQAAVLGDPAGQFNLGISYL 180
A++ YRQAA G+ A Q LG
Sbjct: 177 VAWYSQAARQRNAAAQYALALMYANGEGVPQDNQLALTWYRQAAGQGNAAAQCKLGEMNE 236
Query: 181 QEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
+ V+L Y ++A GH AQ L G GV + Q+A WY +AAE G
Sbjct: 237 MGQGVRLDYAQAVAWYRKAAEQGHADAQTSLGSMYAHGLGVPQDDQQAVAWYRKAAEQGN 296
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG 283
A N + Y G G+P +++QA W +AA GH AQ H LG L+ +G
Sbjct: 297 ASAQCNLGVMYEKGRGVPQNNQQAVAWYSQAARQGHAGAQ--HQLGSLYAQG 346
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
LY+A+ G AQ L G+GV + Q+AA WY +AAE G A N Y+ G
Sbjct: 36 LYKAAEQGDANAQCDLGFMFEMGQGVPQDNQQAAIWYRKAAEQGNADAQSNLGAMYAQGR 95
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
G+P +QA W ++A + G+ Q G G E + +A+ + A G+ A
Sbjct: 96 GVPQDDQQAVAWYRKAVEQGNAITQCNLGAMYYDGKGVEQDYAQAMAWFRKAAEQGDADA 155
Query: 304 DH 305
+
Sbjct: 156 QY 157
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 32/146 (21%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G+ + G+GVR + +A+ + K A +G A G MY + A++ YR+A
Sbjct: 232 GEMNEMGQGVRLDYAQAVAWYRKAAEQGHADAQTSLGSMYAHGLGVPQDDQQAVAWYRKA 291
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
A G+ + Q NLG+ Y +GRGV N Q+A W
Sbjct: 292 AEQGNASAQCNLGVMY----------------------------EKGRGVPQNNQQAVAW 323
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGL 249
Y +AA G+ A + Y+ G G+
Sbjct: 324 YSQAARQGHAGAQHQLGSLYAQGLGV 349
>gi|429749503|ref|ZP_19282622.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429168040|gb|EKY09901.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 783
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 17/193 (8%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNL 175
N AL +K A +G+ A G+ Y E +E AI + +AA G+P + L
Sbjct: 193 NSGDALQQLMKVAEKGNPDAQYTIGMAYLEGKGGQKSEEKAIEWFEKAAAKGNPDAAYKL 252
Query: 176 GISYLQ----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G Y ++A++ +A+I G+ AQ QL++CL+ G G + ++A W
Sbjct: 253 GNYYFYGNSPLIPKFYKKAIEYYTRAAIKGNADAQRQLSVCLYNGIGDAQSFRDAFNWVY 312
Query: 226 RAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 283
++ N +CY+ G G S +QA ++AAD G AQ G L E
Sbjct: 313 KSVNSSPTPVSENNLGVCYATGNGTRPSPQQAIDLFQKAADEGDVMAQYNLGAILLEEAT 372
Query: 284 -EMMKAVVYLELA 295
++ K YLE A
Sbjct: 373 LDVRKGFEYLEKA 385
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 15/133 (11%)
Query: 156 AISLYRQA-------AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQ 200
A+S Y Q A GD Q L +Y + VK YQ ++ +G +AQ
Sbjct: 13 AVSTYSQDIKKLTKLAEKGDVQAQAELADAYFNGKGVKRSYQDAVVWLEKVAESGDAKAQ 72
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
YQL C G+GV + ++AA W+ +AA GG V A +LCY G+G+ S + +W+
Sbjct: 73 YQLGQCYFTGQGVAKSEEKAAEWFEKAANGGNVDAQRQLALCYRDGKGVAQSTEKYYQWI 132
Query: 261 KRAADCGHGKAQL 273
++ AD + QL
Sbjct: 133 EKNADKESPEVQL 145
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 57/151 (37%), Gaps = 28/151 (18%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
R N K L K + + A + G Y + + A++ Y++AA P G+F L
Sbjct: 648 RLNETKGLLWLNKASEQNHVEAQNELGNFYNDKQEYAQALNFYQKAANNNSPVGRFKLAN 707
Query: 178 SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
Y + G G D + + AA Y AA GY A Y
Sbjct: 708 YY----------------------------YNGTGTDRSFERAAELYKEAARQGYALAQY 739
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
CY GEGL S +A W ++A D G
Sbjct: 740 RLGHCYFHGEGLKQSDSRAADWFEQACDNGE 770
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQE------EAVKLLYQASIAGHVRAQYQLALCL 207
+ AI L+++AA GD Q+NLG L+E + + L +A+ ++ A +L
Sbjct: 342 QQAIDLFQKAADEGDVMAQYNLGAILLEEATLDVRKGFEYLEKAASKNNLLALKKLGDLH 401
Query: 208 HRGRGVDFNLQEAARWYLRAAEG------------------GYVRAMYNTSLCYSFGEGL 249
+ G+ + + A +YL+AA+ Y +Y S CY+ G+G+
Sbjct: 402 YNGKYTNISHTRAFEYYLKAAQKEPLQQNESLEYFYQQENEAYAEVLYLLSQCYANGKGV 461
Query: 250 PLSHRQARKWMKRAADCGHGKA 271
S + A +W +AA+ G+ A
Sbjct: 462 KKSEKDAAEWAVKAANLGNQTA 483
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 31/182 (17%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA-MVDAGLMYWEMDKKEAAISLYR 161
V L K ++ G GV K+L KA K AA+G+ A + A Y M A+
Sbjct: 143 VQLALAKAYQTGDGVAKDLQKARSWAQKAAAKGNLDAEYLVASWAYEAMPNSGDALQQLM 202
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
+ A G+P Q+ +G++YL+ G+G + ++A
Sbjct: 203 KVAEKGNPDAQYTIGMAYLE----------------------------GKGGQKSEEKAI 234
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEG--LPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
W+ +AA G A Y Y +G +P +++A ++ RAA G+ AQ + + L
Sbjct: 235 EWFEKAAAKGNPDAAYKLGNYYFYGNSPLIPKFYKKAIEYYTRAAIKGNADAQRQLSVCL 294
Query: 280 FT 281
+
Sbjct: 295 YN 296
>gi|407972996|ref|ZP_11153909.1| peptidoglycan binding domain-containing protein [Nitratireductor
indicus C115]
gi|407431767|gb|EKF44438.1| peptidoglycan binding domain-containing protein [Nitratireductor
indicus C115]
Length = 1239
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R+AA GDP F + Y+ + A++ +A+ AG AQ +L +G G
Sbjct: 963 REAAAGGDPKAFFEIANRYMDGQGGAVDPAKAIEWYTKAADAGFAPAQSRLGDIYQKGIG 1022
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+D + +A W+ AAE G AM+N + ++ G ++ A +W AA+ G +Q
Sbjct: 1023 IDRDPAKAKMWFQLAAEQGNASAMHNLGVLFAMGATGETDNQSAARWFLEAAEHGVTDSQ 1082
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAA----DHVKNVILQQLSATSRDRAML 324
G+ G+ T+ ++ +A + +L R+G+ A D V + +L +D+A+L
Sbjct: 1083 FNLGILAAKGMGTKQDLTEAYKWFDLVARSGDKDAAAKRDEVAANMSPELLKQGKDKALL 1142
Query: 325 --------------VVDSWRAMP 333
+ D+WR P
Sbjct: 1143 WKPKPVDPAVNLVDIPDAWRTAP 1165
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L +A+ G +A +++A G+G + +A WY +AA+ G+ A Y G
Sbjct: 962 LREAAAGGDPKAFFEIANRYMDGQGGAVDPAKAIEWYTKAADAGFAPAQSRLGDIYQKGI 1021
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
G+ +A+ W + AA+ G+ A H LG+
Sbjct: 1022 GIDRDPAKAKMWFQLAAEQGNASAM--HNLGVL 1052
>gi|319938296|ref|ZP_08012693.1| hypothetical protein HMPREF9488_03529 [Coprobacillus sp. 29_1]
gi|319806589|gb|EFW03247.1| hypothetical protein HMPREF9488_03529 [Coprobacillus sp. 29_1]
Length = 1150
Score = 68.2 bits (165), Expect = 6e-09, Method: Composition-based stats.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDK 152
L + M + G +++G G +NL+KA + + + A G+ M + G Y +D
Sbjct: 617 LGDPMAMCTLGYYYENGIGCERNLEKAFEYYQRSAQGGNLRGMTNLGYCYEAGIGTSVDL 676
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-------KLLYQ-ASIAGHVRAQYQLA 204
++A + +Y++AA LG Q NLG Y V K Y+ A+ + RA LA
Sbjct: 677 QKA-VEVYQRAAELGYDVAQCNLGYCYEMAIGVEKDLQLAKKYYELAAQQRNPRALCNLA 735
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
G + N +A Y AA Y RA+ N L Y G G+ + ++A ++ +AA
Sbjct: 736 NLYEIGVDGESNFAKAVELYEEAAAMNYTRALCNLGLYYEEGTGVEQNDKKAVEYYYKAA 795
Query: 265 DCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRA 298
+ G AQ G +G+ E M KA Y ++++++
Sbjct: 796 ELGDEVAQCNLGYCYEMGIGLEVNMQKAFEYYQISSQS 833
Score = 67.4 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKKE-AAISLYRQAAVLGDP 169
G G + +KA + F K AA+ A+ G Y +DK E ++ Y++AA LG
Sbjct: 206 GIGCEVDDEKAFEYFEKAAAKDMPRALFYVGECYCFGRGVDKDEIKGMTHYKKAADLGFT 265
Query: 170 AGQFNLGISY-----LQE---EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
++++G Y +QE EA +A+ G AQ QL G GV+ + Q A
Sbjct: 266 QAKYSVGYCYEYGIGVQEDYHEAATWYQEAANEGLESAQLQLGYFYEAGEGVEQDPQLAV 325
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
WY +A+ Y A + CY G G+ +A+++ R+A+ G+ +A + +G L
Sbjct: 326 YWYQQASHQNYAPAHCYLAYCYEMGIGIEKDIEKAKEYYLRSAEMGYPRAMMSYG-KLIE 384
Query: 282 EGEMMKAVVYLELATRAGETAA 303
+ M A+ YL + G A
Sbjct: 385 DENMSLAMDYLRRSAETGYVYA 406
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 16/186 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +GRG ++ A + K A ++ G M MDK E A++ Y+ AA
Sbjct: 131 YMNGRGRVQDEYMAYQLYEKAAKMNHAKSICSLGYMNEIGLGTPMDK-EKAVAYYQMAAD 189
Query: 166 LGDPAGQFN--------LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
L D N +G E+A + +A+ RA + + C GRGVD +
Sbjct: 190 LDDEIASCNYAFCLYEGIGCEVDDEKAFEYFEKAAAKDMPRALFYVGECYCFGRGVDKDE 249
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ Y +AA+ G+ +A Y+ CY +G G+ + +A W + AA+ G AQL+ L
Sbjct: 250 IKGMTHYKKAADLGFTQAKYSVGYCYEYGIGVQEDYHEAATWYQEAANEGLESAQLQ--L 307
Query: 278 GLFTEG 283
G F E
Sbjct: 308 GYFYEA 313
Score = 64.3 bits (155), Expect = 9e-08, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-MDKKE---AAISLYRQA 163
G ++ G GV ++L +A + + + M + +Y + +D A LY QA
Sbjct: 519 GYCYEVGIGVEQDLQQAKRYYELATQQNNLRGMCNLAYLYEKGIDGAPDYVKAKELYEQA 578
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A P G +LG Y +A + +AS G A L G G +
Sbjct: 579 AAYNYPRGYASLGFLYEDGLGVDKDLNKAFECYQKASELGDPMAMCTLGYYYENGIGCER 638
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
NL++A +Y R+A+GG +R M N CY G G + ++A + +RAA+ G+ AQ
Sbjct: 639 NLEKAFEYYQRSAQGGNLRGMTNLGYCYEAGIGTSVDLQKAVEVYQRAAELGYDVAQCNL 698
Query: 276 G----LGLFTEGEMMKAVVYLELATR 297
G + + E ++ A Y ELA +
Sbjct: 699 GYCYEMAIGVEKDLQLAKKYYELAAQ 724
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDPAG 171
GV K+L A + A + + A+ + +Y E+ A+ LY +AA +
Sbjct: 707 GVEKDLQLAKKYYELAAQQRNPRALCNLANLYEIGVDGESNFAKAVELYEEAAAMNYTRA 766
Query: 172 QFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
NLG+ Y + ++AV+ Y+A+ G AQ L C G G++ N+Q+A +
Sbjct: 767 LCNLGLYYEEGTGVEQNDKKAVEYYYKAAELGDEVAQCNLGYCYEMGIGLEVNMQKAFEY 826
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGL 277
Y +++ Y RA+ N L Y G+ P+ ++A + + AAD + AQ E G+
Sbjct: 827 YQISSQSHYPRAVSNLGLFYELGKAGPIDEQKAFECYQIAADSQYPPAQCNLACCYEDGI 886
Query: 278 GLFTEGEMMKAVVYLELATRAGET 301
G T+ ++ KA + A + T
Sbjct: 887 G--TDIDLQKAFELYKAAAQRNST 908
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGA----ARGS-TLAMVDAGLMYWEMDKKEAAISLYRQ 162
G ++ GRGV ++ KA++ + K +RG LA + + E D A+ Y
Sbjct: 951 GNMYEFGRGVSQDYQKAIEYYSKAVDQDYSRGYYALATLYKSGLGVEKDTP-LALKYYTI 1009
Query: 163 AAVLGDPAGQFNLGISYLQE---------EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA G + +NL + Y E +A++ +A GH A L +C GV
Sbjct: 1010 AADKGHVSAMYNLAVLYDFEAEEQYRDMTKAIQYYQEAVDKGHYGAMNNLGVCYKEEDGV 1069
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ ++A + + +AA+GG A N + Y++G+G + QA+ W ++A +
Sbjct: 1070 PLDFEKAFQLFKKAADGGDYHAFMNLARAYTYGQGTKIDLEQAQVWCQKAVE 1121
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISL 159
+ ++ ++G G KN + A + K A + A+ G Y E AI+
Sbjct: 407 MCKYSYYLENGIGCDKNEELAFEYCQKAADLNDSGALCTLGYYYENGIGCEKNLEKAIAY 466
Query: 160 YRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
Y+Q++ G G NLG Y +++AV++ QAS G+ AQ L C G
Sbjct: 467 YQQSSDAGSLRGMTNLGYCYEAGIGTAVDEKKAVEIYQQASDLGYDIAQCNLGYCYEVGI 526
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGH-- 268
GV+ +LQ+A R+Y A + +R M N + Y G +G P + +A++ ++AA +
Sbjct: 527 GVEQDLQQAKRYYELATQQNNLRGMCNLAYLYEKGIDGAP-DYVKAKELYEQAAAYNYPR 585
Query: 269 GKAQL----EHGLGLFTEGEMMKAVVYLELATRAGETAA 303
G A L E GLG+ + ++ KA + A+ G+ A
Sbjct: 586 GYASLGFLYEDGLGV--DKDLNKAFECYQKASELGDPMA 622
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAIS 158
L G ++ G GV +N KA++ + K A G +A + G Y EM + A
Sbjct: 767 LCNLGLYYEEGTGVEQNDKKAVEYYYKAAELGDEVAQCNLGYCY-EMGIGLEVNMQKAFE 825
Query: 159 LYRQAAVLGDPAGQFNLGISY-------LQEEAVKLLYQ-ASIAGHVRAQYQLALCLHRG 210
Y+ ++ P NLG+ Y + E+ YQ A+ + + AQ LA C G
Sbjct: 826 YYQISSQSHYPRAVSNLGLFYELGKAGPIDEQKAFECYQIAADSQYPPAQCNLACCYEDG 885
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
G D +LQ+A Y AA+ R +YN + +G G + + A + + A+ G+
Sbjct: 886 IGTDIDLQKAFELYKAAAQRNSTRGLYNVARFLEYGIGCDVDYDLAFENYQSASQMGYLD 945
Query: 271 AQLEHG----LGLFTEGEMMKAVVYLELA 295
A + G G + KA+ Y A
Sbjct: 946 ADIALGNMYEFGRGVSQDYQKAIEYYSKA 974
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 64/242 (26%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ + GRGV K+ K + + K A G T A G Y + D EAA + Y++
Sbjct: 236 GECYCFGRGVDKDEIKGMTHYKKAADLGFTQAKYSVGYCYEYGIGVQEDYHEAA-TWYQE 294
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ--------LALCLHRGRGVD 214
AA G + Q LG Y E V+ Q ++ + +A +Q LA C G G++
Sbjct: 295 AANEGLESAQLQLGYFYEAGEGVEQDPQLAVYWYQQASHQNYAPAHCYLAYCYEMGIGIE 354
Query: 215 FNLQEAARWYLRAAE-------------------------------GGYVRAMYNTSLCY 243
++++A +YLR+AE GYV AM S
Sbjct: 355 KDIEKAKEYYLRSAEMGYPRAMMSYGKLIEDENMSLAMDYLRRSAETGYVYAMCKYSYYL 414
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKA------QLEHGLGLFTEGEMMKAVVYLELATR 297
G G + A ++ ++AAD A E+G+G E + KA+ Y + ++
Sbjct: 415 ENGIGCDKNEELAFEYCQKAADLNDSGALCTLGYYYENGIG--CEKNLEKAIAYYQQSSD 472
Query: 298 AG 299
AG
Sbjct: 473 AG 474
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 43/196 (21%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL------MYWEMD------------- 151
++ G G+ K+++KA + +L+ A G AM+ G M MD
Sbjct: 347 YEMGIGIEKDIEKAKEYYLRSAEMGYPRAMMSYGKLIEDENMSLAMDYLRRSAETGYVYA 406
Query: 152 ----------------KKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKL 187
+E A ++AA L D LG Y E+A+
Sbjct: 407 MCKYSYYLENGIGCDKNEELAFEYCQKAADLNDSGALCTLGYYYENGIGCEKNLEKAIAY 466
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
Q+S AG +R L C G G + ++A Y +A++ GY A N CY G
Sbjct: 467 YQQSSDAGSLRGMTNLGYCYEAGIGTAVDEKKAVEIYQQASDLGYDIAQCNLGYCYEVGI 526
Query: 248 GLPLSHRQARKWMKRA 263
G+ +QA+++ + A
Sbjct: 527 GVEQDLQQAKRYYELA 542
Score = 47.0 bits (110), Expect = 0.012, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 13/163 (7%)
Query: 154 EAAISLYRQAAVLGDPAGQFN--------LGISYLQEEAVKLLYQASIAGHVRAQYQLAL 205
+ A LY+ AA G +N +G + A + AS G++ A L
Sbjct: 893 QKAFELYKAAAQRNSTRGLYNVARFLEYGIGCDVDYDLAFENYQSASQMGYLDADIALGN 952
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
GRGV + Q+A +Y +A + Y R Y + Y G G+ A K+ AAD
Sbjct: 953 MYEFGRGVSQDYQKAIEYYSKAVDQDYSRGYYALATLYKSGLGVEKDTPLALKYYTIAAD 1012
Query: 266 CGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAA 303
GH A + E E M KA+ Y + A G A
Sbjct: 1013 KGHVSAMYNLAVLYDFEAEEQYRDMTKAIQYYQEAVDKGHYGA 1055
>gi|5852329|gb|AAD54009.1|AF088857_1 hypothetical protein [Vogesella indigofera]
Length = 268
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA- 155
+A R G R++ G GV ++ KA + + A +G A + ++Y +++ +A
Sbjct: 44 DANAQFRLGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVNQNDAE 103
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A++ +R+AA G Q NLG + +EAV +A+ G + A Y LA+ +
Sbjct: 104 ALAWFRKAATQGQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADYNLAIMM 163
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRG+ + A + + AE G A N L Y G G+ ++ A W+++
Sbjct: 164 REGRGLPQDDAAAVALFRKVAEQGVAIAQSNLGLMYKLGRGVAQDYQLALSWLRKGVAQK 223
Query: 268 HGKAQLEHGLGLFTEGEMM-----KAVVYLELATRA 298
AQ G+ L+ EG+ + +AVV+ LA A
Sbjct: 224 SAMAQANLGV-LYLEGKGVAQDDNEAVVWFRLAAGA 258
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQ++L + +G GV + +AA WY +AA G A N ++ Y G+G+ +
Sbjct: 43 GDANAQFRLGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVNQNDA 102
Query: 255 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
+A W ++AA G +AQL G G T +AVV+ A G+ AD+ ++
Sbjct: 103 EALAWFRKAATQGQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADYNLAIM 162
Query: 311 LQQLSATSRDRAMLV 325
+++ +D A V
Sbjct: 163 MREGRGLPQDDAAAV 177
>gi|168334953|ref|ZP_02693071.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 561
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISLYRQAAVLGDP 169
G GV K++ +A++ K A++G A Y D + + + ++AA +G
Sbjct: 53 GDGVDKDVTQAIEWLEKAASQGHADAQWSLVSCYQYEDTRSLDLDKILECSQKAADMGHS 112
Query: 170 AGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
A Q+ +GI Y + A++ ++++ G+ AQ +L C G V +L +AA
Sbjct: 113 AAQYQMGIRYYLGDGLSSDPATAMEYFHKSANLGYALAQLRLGYCYQYGDAVAQDLTKAA 172
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
W+ AA+ G A Y+ CY +GEG+ + W ++AA GH AQ
Sbjct: 173 EWFKLAAKKGNADAQYSLGFCYRYGEGVSEDFALSNVWYQKAATQGHTNAQF 224
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 92 NDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL 145
N A++ REA L G + +G ++ ++ F + AA S + G
Sbjct: 350 NTAVQLFREAAKSQHTGALFELGNYYYYGNAETHDILLSMICFSQAAAANSASSQYQLGF 409
Query: 146 MYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASI 193
Y + A++ Y++AA A Q LG Y E V + +++
Sbjct: 410 FYHQGQPVAQNFATAVTWYQKAATFELAAAQTALGFCYYHGEGVSQDFDIAAEWFTKSAN 469
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
GH AQ+ L + G GV +L AA+W+ +A G A YN ++CY+ G+G+
Sbjct: 470 QGHAIAQFYLGVIYAYGEGVSLDLSLAAKWFSASAAQGDAEAQYNLAICYATGQGVVQDF 529
Query: 254 RQARKWMKRAADCGH--GKAQLE 274
A +W K+AA G+ + QLE
Sbjct: 530 STAVEWFKKAAALGNTLAEQQLE 552
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 13/182 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYR-----Q 162
G +++G GV ++ + + K A +G T A + + + IS
Sbjct: 191 GFCYRYGEGVSEDFALSNVWYQKAATQGHTNAQFILDISSTSKTSQSSVISQAMLDESLS 250
Query: 163 AAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA LGDP Q+ LG+ Y + E A ++A+ H +AQY+L C G G
Sbjct: 251 AAELGDPNAQYILGLCYFKGELVPKNLXQAATYFHEAARQDHGKAQYELGKCYFYGYGKI 310
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +AA Y AA G A Y CY FG+G+ A + + AA H A E
Sbjct: 311 QDFTQAATLYQAAANQGLASAQYRLGSCYKFGKGVEPDANTAVQLFREAAKSQHTGALFE 370
Query: 275 HG 276
G
Sbjct: 371 LG 372
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
N G S LQ K L + + G + +QYQ+ LC +G GVD ++ +A W +AA G+
Sbjct: 20 NQGTSELQ---FKRLLKFATKGSIESQYQVGLCYFKGDGVDKDVTQAIEWLEKAASQGHA 76
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
A ++ CY + + L + + ++AAD GH AQ + G+
Sbjct: 77 DAQWSLVSCYQYEDTRSLDLDKILECSQKAADMGHSAAQYQMGI 120
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 16/197 (8%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQAAVLGDPAGQFNLGISYLQEEA 184
LK A +GS + GL Y++ D + AI +AA G Q++L Y E+
Sbjct: 32 LKFATKGSIESQYQVGLCYFKGDGVDKDVTQAIEWLEKAASQGHADAQWSLVSCYQYEDT 91
Query: 185 --------VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 236
++ +A+ GH AQYQ+ + + G G+ + A ++ ++A GY A
Sbjct: 92 RSLDLDKILECSQKAADMGHSAAQYQMGIRYYLGDGLSSDPATAMEYFHKSANLGYALAQ 151
Query: 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEG---EMMKAVVYL 292
CY +G+ + +A +W K AA G+ AQ G + EG + + V+
Sbjct: 152 LRLGYCYQYGDAVAQDLTKAAEWFKLAAKKGNADAQYSLGFCYRYGEGVSEDFALSNVWY 211
Query: 293 ELATRAGETAADHVKNV 309
+ A G T A + ++
Sbjct: 212 QKAATQGHTNAQFILDI 228
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 78/190 (41%), Gaps = 15/190 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
GK + +G G ++ +A + A +G A G Y E D A+ L+R+
Sbjct: 300 GKCYFYGYGKIQDFTQAATLYQAAANQGLASAQYRLGSCYKFGKGVEPDAN-TAVQLFRE 358
Query: 163 AAVLGDPAGQFNLGISYLQEEA--------VKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA F LG Y A + QA+ A +QYQL H+G+ V
Sbjct: 359 AAKSQHTGALFELGNYYYYGNAETHDILLSMICFSQAAAANSASSQYQLGFFYHQGQPVA 418
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N A WY +AA A CY GEG+ A +W ++A+ GH AQ
Sbjct: 419 QNFATAVTWYQKAATFELAAAQTALGFCYYHGEGVSQDFDIAAEWFTKSANQGHAIAQFY 478
Query: 275 HGLGLFTEGE 284
G+ ++ GE
Sbjct: 479 LGV-IYAYGE 487
>gi|17544743|ref|NP_518145.1| signal peptide protein [Ralstonia solanacearum GMI1000]
gi|17427032|emb|CAD13552.1| putative signal peptide protein [Ralstonia solanacearum GMI1000]
Length = 252
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 133 ARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEA 184
A+G A+ + ++E ++ AI + +AA G+ QFN + ++ E A
Sbjct: 41 AQGDAAALTQIAIAHYEHNEFGRAIDEFAEAAQRGNRLAQFNYAMMLMRGEGTVAQPEAA 100
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
VK L +A+ AQ+ RG V +L EA +WY RAA GG++ A + Y
Sbjct: 101 VKWLRRAADNQMTHAQFAYGELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYF 160
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQ 272
G G+P + +A W K+AA+ G G +Q
Sbjct: 161 TGRGVPRDYGRAFTWYKKAAEAGDGPSQ 188
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFN 174
+A+D F + A RG+ LA + +M + + EAA+ R+AA QF
Sbjct: 59 NEFGRAIDEFAEAAQRGNRLAQFNYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFA 118
Query: 175 LG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
G + EA K +A+ GH+ AQ LA GRGV + A WY +
Sbjct: 119 YGELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYFTGRGVPRDYGRAFTWYKK 178
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSH--RQARKWMKRAADCG 267
AAE G + Y Y GE ++ QA+ W RAA G
Sbjct: 179 AAEAGDGPSQYIVGSYYERGEPGVVAQDIEQAKLWYGRAAAQG 221
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 167 GDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
GD A + I++ + A+ +A+ G+ AQ+ A+ L RG G + A +
Sbjct: 43 GDAAALTQIAIAHYEHNEFGRAIDEFAEAAQRGNRLAQFNYAMMLMRGEGTVAQPEAAVK 102
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
W RAA+ A + + GE +P S +A KW +RAA GH +AQ FT
Sbjct: 103 WLRRAADNQMTHAQFAYGELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYFT 161
>gi|256820691|ref|YP_003141970.1| Sel1 domain-containing protein repeat-containing protein
[Capnocytophaga ochracea DSM 7271]
gi|256582274|gb|ACU93409.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea DSM 7271]
Length = 278
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+S Y +AA GD Q LG+ Y E+A +A+ G+ AQ +L +C
Sbjct: 74 AVSWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCY 133
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
H+G+GV + ++A W+ +AA+ + A CY G G+ S A W ++AA+ G
Sbjct: 134 HKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQSDSDAVFWYEKAANQG 193
Query: 268 HGKAQLEHGLGLF----TEGEMMKAVVYLELATRAGETAADHV 306
+AQ G F KA+ + E A G+ A +
Sbjct: 194 DVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTI 236
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+ A GD Q L +Y + +AV +A+ G V++Q +L LC + +GV
Sbjct: 44 EKATKGDMEAQVRLATNYEKGIGVPQSFPKAVSWYEKAAEQGDVKSQTKLGLCYYYRKGV 103
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ ++AA W+ +AAE GY A +CY G+G+ S QA W ++AAD +AQ
Sbjct: 104 VQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQS 163
Query: 274 EHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
G GL AV + E A G+ A
Sbjct: 164 FLGYCYYKGLGVAQSDSDAVFWYEKAANQGDVEA 197
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F +S+ Q E K L + + G + AQ +LA +G GV + +A WY +AAE G
Sbjct: 27 FFFAMSHAQREDFKTLVEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVSWYEKAAEQGD 86
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
V++ LCY + +G+ S+ +A W ++AA+ G+ +AQ + G+ + +G+ +K
Sbjct: 87 VKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV-CYHKGQGVK 140
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 77/206 (37%), Gaps = 48/206 (23%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
+R ++ G GV ++ KA+ + K A +G + GL Y+ + E A +
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVSWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWF 114
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA G Q LG+ Y + E+AV +A+ AQ L C ++G G
Sbjct: 115 QKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLG 174
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTS-------------------------------- 240
V + +A WY +AA G V A N
Sbjct: 175 VAQSDSDAVFWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQ 234
Query: 241 ----LCYSFGEGLPLSHRQARKWMKR 262
CY G G+ S ++A W ++
Sbjct: 235 TILGFCYYAGTGVDKSQKRAIYWFEK 260
>gi|78778123|ref|YP_394438.1| Sel1 repeat-containing protein [Sulfurimonas denitrificans DSM
1251]
gi|78498663|gb|ABB45203.1| Sel1-like repeat [Sulfurimonas denitrificans DSM 1251]
Length = 228
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQ 172
K+ + A + + + G+ AM G MY ++D+K+A +SLY +AA L P
Sbjct: 11 NKDFESAFKLYTQLSNEGNADAMASLGYMYQNAQGCDIDEKKA-LSLYERAAELKQPYAL 69
Query: 173 FNLGISYL---------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
+NLGI Y+ Q +A +A+ V A Y+ AL L RG G N EAA W
Sbjct: 70 YNLGILYMNGLGGVEHDQFKAHDFFMEAATREVVPAMYETALMLERGLGCLQNFSEAAFW 129
Query: 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
Y A+ G++ + N + Y G G+ + KRAAD G + GL L+ +G
Sbjct: 130 YEEGAKRGHLESFNNLGVLYKEGHGVHKDEARCFICFKRAADGGLAEGLYNLGL-LYDQG 188
>gi|420150505|ref|ZP_14657663.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394751908|gb|EJF35637.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 278
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F G+SY Q E K L + + G + AQ +LA +G GV + +A WY +AAE G
Sbjct: 27 FFFGMSYAQREDFKTLVEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAEQGD 86
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
V++ LCY + +G+ S+ +A W ++AA+ G+ +AQ + G+ + +G+ +K
Sbjct: 87 VKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV-CYHKGQGVK 140
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A++ Y +AA GD Q LG+ Y E+A +A+ G+ AQ +L +C
Sbjct: 74 AVAWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCY 133
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
H+G+GV + ++A W+ +AA+ + A CY G G+ S A W ++AA+ G
Sbjct: 134 HKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVVQSDSDAVLWYEKAANQG 193
Query: 268 HGKAQLEHGLGLF----TEGEMMKAVVYLELATRAGETAADHV 306
+AQ G F KA+ + E A G+ A +
Sbjct: 194 DVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTI 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 16/156 (10%)
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+ A GD Q L +Y + +AV +A+ G V++Q +L LC + +GV
Sbjct: 44 EKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLCYYYRKGV 103
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ- 272
+ ++AA W+ +AAE GY A +CY G+G+ S QA W ++AAD +AQ
Sbjct: 104 VQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQS 163
Query: 273 -----LEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
GLG+ AV++ E A G+ A
Sbjct: 164 FLGYCYYKGLGVVQSDS--DAVLWYEKAANQGDVEA 197
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 77/208 (37%), Gaps = 48/208 (23%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
+R ++ G GV ++ KA+ + K A +G + GL Y+ + E A +
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWF 114
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA G Q LG+ Y + E+AV +A+ AQ L C ++G G
Sbjct: 115 QKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLG 174
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTS-------------------------------- 240
V + +A WY +AA G V A N
Sbjct: 175 VVQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQ 234
Query: 241 ----LCYSFGEGLPLSHRQARKWMKRAA 264
CY G G+ S ++A W ++
Sbjct: 235 TILGFCYYAGTGVDKSQKRAIYWFEKGC 262
>gi|416217041|ref|ZP_11623990.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
7169]
gi|326560892|gb|EGE11257.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
7169]
Length = 230
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQA 191
A G +A D Y++ A + +AA G+ Q NLG+ Y + + V+ Y
Sbjct: 35 AQSGGAVAQSDLADEYYQQGNHAKAFEWFTKAAHQGEAEAQHNLGVMYYEGQGVRQDYYK 94
Query: 192 SIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
S+ G+ AQ+ LAL +G GV + +A W+ +AA G A ++ + Y
Sbjct: 95 SVEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMY 154
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
G+G+ + +A +W +AA+ G +AQ G+ ++ EG+
Sbjct: 155 YEGQGVRQDYHKAVEWFTKAANQGFAQAQNNLGV-MYDEGQ 194
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNL 175
N KA + F K A +G A + G+MY+E ++ Y +AA G QFNL
Sbjct: 55 NHAKAFEWFTKAAHQGEAEAQHNLGVMYYEGQGVRQDYYKSVEWYTKAAKQGYADAQFNL 114
Query: 176 GISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ Y Q + V+ Y +A+ G AQ+ L + + G+GV + +A W+ +A
Sbjct: 115 ALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYYEGQGVRQDYHKAVEWFTKA 174
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
A G+ +A N + Y G+G+ + A+ + +A D G
Sbjct: 175 ANQGFAQAQNNLGVMYDEGQGVRQNIATAKIYYGQACDHG 214
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 159 LYRQAAVLGDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
L RQA G Q +L Y Q+ +A + +A+ G AQ+ L + + G+GV
Sbjct: 31 LTRQAQS-GGAVAQSDLADEYYQQGNHAKAFEWFTKAAHQGEAEAQHNLGVMYYEGQGVR 89
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++ WY +AA+ GY A +N +L Y+ G+G+ + +A +W +AA+ G +AQ
Sbjct: 90 QDYYKSVEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFS 149
Query: 275 HGLGLFTEGEMM-----KAVVYLELATRAG 299
G+ ++ EG+ + KAV + A G
Sbjct: 150 LGV-MYYEGQGVRQDYHKAVEWFTKAANQG 178
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G GVR++ KA + F K A +G A G+MY+E A+ + +AA
Sbjct: 118 YAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYYEGQGVRQDYHKAVEWFTKAANQ 177
Query: 167 GDPAGQFNLGISYLQEEAVK 186
G Q NLG+ Y + + V+
Sbjct: 178 GFAQAQNNLGVMYDEGQGVR 197
>gi|183600142|ref|ZP_02961635.1| hypothetical protein PROSTU_03678 [Providencia stuartii ATCC 25827]
gi|188022431|gb|EDU60471.1| Sel1 repeat protein [Providencia stuartii ATCC 25827]
Length = 233
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W--EMDKKEA 155
A R G +++G GV ++ KA + K A + + A G+M+ W E D ++A
Sbjct: 38 ATAQYRLGTMYQYGEGVEQDYQKARQWYEKAAKQNNADAQYKLGVMFSHGWGGEQDDQQA 97
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVR--------AQYQLALCL 207
+ Y ++A G+ + Q NLG+ + E V+ YQ ++ +++ AQ L +
Sbjct: 98 RL-WYLKSAQQGNSSAQSNLGVMFYLGEGVEQDYQQALRWYLKSAEQNNSAAQNNLGVLY 156
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV+ + Q+A +WY + AE A +N + Y G G+ S A+ W ++ D G
Sbjct: 157 QYGNGVEQDYQQALQWYQKGAEQDNELAQFNLAQMYDKGLGVRQSKSTAKIWYSKSCDNG 216
Query: 268 H 268
+
Sbjct: 217 N 217
>gi|114777221|ref|ZP_01452232.1| Sel1-like repeat [Mariprofundus ferrooxydans PV-1]
gi|114552366|gb|EAU54849.1| Sel1-like repeat [Mariprofundus ferrooxydans PV-1]
Length = 370
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
+I G+ AQ L + + GRGV N E A W +RAA GY A YN S+ Y G G+ +
Sbjct: 137 AIDGNASAQATLGVMYYEGRGVTQNYSEGADWLIRAANSGYANAQYNLSIAYGQGNGVAI 196
Query: 252 SHRQARKWMKRAADCGHGKAQ 272
+A WM++AA GH A+
Sbjct: 197 DIDEAIIWMEKAASQGHAAAK 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 13/175 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGST-----LAMVDAGLMYWEMDKKEAAISLYRQAAV 165
+ G GV ++D+A+ K A++G L MV K + +S+Y AA
Sbjct: 188 YGQGNGVAIDIDEAIIWMEKAASQGHAAAKRALPMVKQEQARLANSKLDKDVSVYLSAAE 247
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G+P F G+ + +EA+K +++ G Q + + +GRGV N
Sbjct: 248 SGNPEAMFRYGMLFEDGTGVARNMDEAIKWYKKSAEKGFAVGQTYMGVIYDKGRGVRQNN 307
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A WY + A GG +A +N +CY G G +W++++A+ G+ A+
Sbjct: 308 TTAFEWYKKGATGGDAQAQFNLGICYITGRGTQKDEAIGSEWIRKSANNGYESAK 362
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 17/189 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + GRGV +N + D ++ A G A + + Y + +D EA I + +
Sbjct: 149 GVMYYEGRGVTQNYSEGADWLIRAANSGYANAQYNLSIAYGQGNGVAIDIDEAIIWM-EK 207
Query: 163 AAVLGDPAG----------QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
AA G A Q L S L ++ V + A+ +G+ A ++ + G G
Sbjct: 208 AASQGHAAAKRALPMVKQEQARLANSKLDKD-VSVYLSAAESGNPEAMFRYGMLFEDGTG 266
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V N+ EA +WY ++AE G+ + Y G G+ ++ A +W K+ A G +AQ
Sbjct: 267 VARNMDEAIKWYKKSAEKGFAVGQTYMGVIYDKGRGVRQNNTTAFEWYKKGATGGDAQAQ 326
Query: 273 LEHGLGLFT 281
G+ T
Sbjct: 327 FNLGICYIT 335
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-------KEAA 156
+ R+G F+ G GV +N+D+A+ + K A +G + G++Y DK A
Sbjct: 254 MFRYGMLFEDGTGVARNMDEAIKWYKKSAEKGFAVGQTYMGVIY---DKGRGVRQNNTTA 310
Query: 157 ISLYRQAAVLGDPAGQFNLGISYL 180
Y++ A GD QFNLGI Y+
Sbjct: 311 FEWYKKGATGGDAQAQFNLGICYI 334
>gi|393781483|ref|ZP_10369678.1| hypothetical protein HMPREF1071_00546 [Bacteroides salyersiae
CL02T12C01]
gi|392676546|gb|EIY69978.1| hypothetical protein HMPREF1071_00546 [Bacteroides salyersiae
CL02T12C01]
Length = 828
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Query: 101 AMVLLRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDK---KEA 155
A + G + +G G ++ +A++ + K A S +AM+ G Y ++ DK E
Sbjct: 602 AYAQFKMGDYYFYGYGPCMEDNKQAVEWYEKAVANNSPMAMLRLGEYYLYDYDKLNESEK 661
Query: 156 AISLYRQAAVL---GDPAG---QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHR 209
A ++QAA L + G + +G+ + EA K A+ G+ + Y+ LC +
Sbjct: 662 AFVYFKQAAELEFYSEGIGICYEMGIGVEENETEAFKYYTLAANNGNTMSMYRTGLCYYN 721
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
G GV NLQEA RW+ AA V A Y +GEG +W+ +AA+
Sbjct: 722 GVGVKQNLQEAFRWFNDAAGQESVHAYYYLGKMLMYGEGCTPDAETGLQWLLKAAEMNSD 781
Query: 270 KAQLEHG 276
KAQ E G
Sbjct: 782 KAQFELG 788
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 10/167 (5%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE 182
K+ + + K AA+GS AMV+ G + E A L+ +AA P G + G YL E
Sbjct: 448 KSKEYYEKAAAQGSAYAMVELGFLQENERNYEQAFELFSKAAEQEYPYGMYRTGF-YLSE 506
Query: 183 ---------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
E +A+ AG A + + C GV+ + +A WY + E
Sbjct: 507 GILGEAKPEEGFAWYLKAAEAGDTDAMFAVGRCYKNAVGVEEDPDKALEWYHKGEENNEP 566
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
R + L Y G G+ + +A ++M RAA+ + AQ + G F
Sbjct: 567 RCITELGLAYENGYGVEENPHKAVEYMTRAAETNYAYAQFKMGDYYF 613
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 13/159 (8%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQF 173
+N ++A + F K A + M G E K E + Y +AA GD F
Sbjct: 475 ERNYEQAFELFSKAAEQEYPYGMYRTGFYLSEGILGEAKPEEGFAWYLKAAEAGDTDAMF 534
Query: 174 NLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
+G Y ++A++ ++ R +L L G GV+ N +A +
Sbjct: 535 AVGRCYKNAVGVEEDPDKALEWYHKGEENNEPRCITELGLAYENGYGVEENPHKAVEYMT 594
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPL-SHRQARKWMKRA 263
RAAE Y A + Y +G G + ++QA +W ++A
Sbjct: 595 RAAETNYAYAQFKMGDYYFYGYGPCMEDNKQAVEWYEKA 633
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-MDKKEAAISLYRQAAVL 166
G ++ G GV +N +A + A G+T++M GL Y+ + K+ +R
Sbjct: 680 GICYEMGIGVEENETEAFKYYTLAANNGNTMSMYRTGLCYYNGVGVKQNLQEAFRW---F 736
Query: 167 GDPAGQ--------------FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
D AGQ + G + E ++ L +A+ +AQ++L G G
Sbjct: 737 NDAAGQESVHAYYYLGKMLMYGEGCTPDAETGLQWLLKAAEMNSDKAQFELGNAYLSGNG 796
Query: 213 VDFNLQEAARWYLRAAEGGYVRAM 236
V+ N + A W+ +AAE G +A+
Sbjct: 797 VEENDEIAMEWFEKAAENGNEKAL 820
>gi|205352572|ref|YP_002226373.1| hypothetical protein SG1357 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|375123383|ref|ZP_09768547.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|205272353|emb|CAR37233.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326627633|gb|EGE33976.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
Length = 439
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 258 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 317
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 318 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 377
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCG 267
GRGV N + A +WYL+AAE G A Y+ G +G+P ++QA W A+ G
Sbjct: 378 TGRGVPENSRNALKWYLKAAEQGVTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYG 437
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 281 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 340
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 341 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 400
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 401 VTPAQLALG 409
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 40 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 99
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI------------AGHVR-------AQYQLA 204
A LGD + Q LG +Y+ + Q ++ AG VR AQ++L
Sbjct: 100 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 159
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ G+GV + Q+ A +AAE Y A + Y +GEG+ +RQA W+
Sbjct: 160 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVSQDYRQAVYWLNE 217
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-----YRQ 162
G + +G GV ++ +A+ +G T + +Y DK A + YR+
Sbjct: 195 GVAYFYGEGVSQDYRQAVYWLNEGIPSSYTPGHIPLNALY---DKAHPADQVHSQTWYRK 251
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
A Q+N G+ Y L++ + L + +A+ G AQ + + +G GV
Sbjct: 252 TAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVS 311
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 312 QDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQ 371
Query: 275 HGLGLFT 281
G+ T
Sbjct: 372 LGVAYST 378
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ------LALCLHRGRGVD 214
Q A GD + QF LG Y + VK Y+ +I +A Q L H G +
Sbjct: 25 EQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGEN 84
Query: 215 FNL--QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
F L Q+A WY +AAE G Y +G+G P + + A +W ++AA
Sbjct: 85 FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAA 136
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
V+ L Q + G AQ+ L GR V + + A +W +A + G + + Y+
Sbjct: 21 VQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYN 80
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAA 303
+GE PLS ++A +W ++AA+ G Q G ++ +G + LE +A
Sbjct: 81 YGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTN 140
Query: 304 DHVKNVILQQLSATS 318
D V+ Q SA+S
Sbjct: 141 D--AGVVRGQGSASS 153
>gi|167380701|ref|XP_001735416.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902596|gb|EDR28375.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 305
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 162 QAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
QAA G FN+G Y ++EAVK Y+++ G +A L C G G+
Sbjct: 12 QAANNGSTIAMFNVGCWYYLGENFKMNKKEAVKWYYKSAKEGCGKAMCNLGRCYFDGEGI 71
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ N ++A +W+ R+A+ G V +N S CY +G+G + +A W K A+ GH +A +
Sbjct: 72 ECNKKKAFKWFKRSAKKGVVSGQFNCSNCYYYGDGTQRNIDKAMYWSKLASINGHARAFI 131
Query: 274 EHG 276
+G
Sbjct: 132 IYG 134
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
E V+ QA+ G A + + + G N +EA +WY ++A+ G +AM N
Sbjct: 3 NELYVQWTLQAANNGSTIAMFNVGCWYYLGENFKMNKKEAVKWYYKSAKEGCGKAMCNLG 62
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELAT 296
CY GEG+ + ++A KW KR+A G Q + G T+ + KA+ + +LA+
Sbjct: 63 RCYFDGEGIECNKKKAFKWFKRSAKKGVVSGQFNCSNCYYYGDGTQRNIDKAMYWSKLAS 122
Query: 297 RAGETAA 303
G A
Sbjct: 123 INGHARA 129
>gi|429745684|ref|ZP_19279087.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429168386|gb|EKY10223.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 278
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F G+SY Q E K L + + G + AQ +LA +G GV + +A WY +AAE G
Sbjct: 27 FFFGMSYAQREDFKTLVEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAEQGD 86
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
V++ LCY + +G+ S+ +A W ++AA+ G+ +AQ + G+ + +G+ +K
Sbjct: 87 VKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV-CYHKGQGVK 140
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A++ Y +AA GD Q LG+ Y E+A +A+ G+ AQ +L +C
Sbjct: 74 AVAWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCY 133
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
H+G+GV + ++A W+ +AA+ + A CY G G+ S A W ++AA+ G
Sbjct: 134 HKGQGVKQSNEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQSDSDAVFWYEKAANQG 193
Query: 268 HGKAQLEHGLGLF----TEGEMMKAVVYLELATRAGETAADHV 306
+AQ G F KA+ + E A G+ A +
Sbjct: 194 DVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTI 236
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+ A GD Q L +Y + +AV +A+ G V++Q +L LC + +GV
Sbjct: 44 EKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLCYYYRKGV 103
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ ++AA W+ +AAE GY A +CY G+G+ S+ QA W ++AAD +AQ
Sbjct: 104 VQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSNEQAVLWFQKAADQDFAEAQS 163
Query: 274 EHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
G GL AV + E A G+ A
Sbjct: 164 FLGYCYYKGLGVAQSDSDAVFWYEKAANQGDVEA 197
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 77/208 (37%), Gaps = 48/208 (23%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
+R ++ G GV ++ KA+ + K A +G + GL Y+ + E A +
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWF 114
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA G Q LG+ Y + E+AV +A+ AQ L C ++G G
Sbjct: 115 QKAAEQGYAEAQSKLGVCYHKGQGVKQSNEQAVLWFQKAADQDFAEAQSFLGYCYYKGLG 174
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTS-------------------------------- 240
V + +A WY +AA G V A N
Sbjct: 175 VAQSDSDAVFWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQ 234
Query: 241 ----LCYSFGEGLPLSHRQARKWMKRAA 264
CY G G+ S ++A W ++
Sbjct: 235 TILGFCYYAGTGVDKSQKRAIYWFEKGC 262
>gi|393780227|ref|ZP_10368447.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608869|gb|EIW91703.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 278
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A+S Y +AA GD Q LG+ Y E+A +A+ G+ AQ +L +C
Sbjct: 74 AVSWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCY 133
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
H+G+GV + ++A W+ +AA+ + A CY G G+ S A W ++AA+ G
Sbjct: 134 HKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQG 193
Query: 268 HGKAQLEHGLGLF----TEGEMMKAVVYLELATRAGETAADHV 306
+AQ G F KA+ + E A G+ A +
Sbjct: 194 DVEAQRNLGSYYFKGQGVPQSYTKAIFWFEKAANQGDKEAQTI 236
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F G+S+ Q E K L + + G + AQ +LA +G GV + +A WY +AAE G
Sbjct: 27 FFFGMSHAQREDFKTLVEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVSWYEKAAEQGD 86
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
V++ LCY + +G+ S+ +A W ++AA+ G+ +AQ + G+ + +G+ +K
Sbjct: 87 VKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV-CYHKGQGVK 140
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+ A GD Q L +Y + +AV +A+ G V++Q +L LC + +GV
Sbjct: 44 EKATKGDMEAQVRLATNYEKGIGVPQSFPKAVSWYEKAAEQGDVKSQTKLGLCYYYRKGV 103
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ ++AA W+ +AAE GY A +CY G+G+ S QA W ++AAD +AQ
Sbjct: 104 VQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQS 163
Query: 274 EHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
G GL AV++ E A G+ A
Sbjct: 164 FLGYCYYKGLGVAQSDSDAVLWYEKAANQGDVEA 197
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 77/208 (37%), Gaps = 48/208 (23%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
+R ++ G GV ++ KA+ + K A +G + GL Y+ + E A +
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVSWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWF 114
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA G Q LG+ Y + E+AV +A+ AQ L C ++G G
Sbjct: 115 QKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLG 174
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTS-------------------------------- 240
V + +A WY +AA G V A N
Sbjct: 175 VAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGVPQSYTKAIFWFEKAANQGDKEAQ 234
Query: 241 ----LCYSFGEGLPLSHRQARKWMKRAA 264
CY G G+ S ++A W ++
Sbjct: 235 TILGFCYYAGTGVDKSQKRAIYWFEKGC 262
>gi|423141051|ref|ZP_17128689.1| Sel1 repeat protein [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379053605|gb|EHY71496.1| Sel1 repeat protein [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 324
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ-EEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFN 216
R+AA GD Q LG+ Y + + K Y +++ G+ AQY + + GRGV N
Sbjct: 51 RRAAEQGDMVAQNELGVLYEKAKNHTKSAYWYNKSTEKGYSLAQYNIGVAYENGRGVSKN 110
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
Q+A WY +AA GY +A +N + Y G+G+P +R++R+W +AA
Sbjct: 111 YQKANDWYRKAAIQGYSKAAFNLGMLYFEGKGVPQDYRKSREWFMQAA 158
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY 189
+ A +G +A + G++Y + + Y ++ G Q+N+G++Y V Y
Sbjct: 52 RAAEQGDMVAQNELGVLYEKAKNHTKSAYWYNKSTEKGYSLAQYNIGVAYENGRGVSKNY 111
Query: 190 Q--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
Q A+I G+ +A + L + G+GV + +++ W+++AA AMY
Sbjct: 112 QKANDWYRKAAIQGYSKAAFNLGMLYFEGKGVPQDYRKSREWFMQAAAENNTMAMYAMGR 171
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
Y +G G+P RQA W ++ D G +A+ L L+++G
Sbjct: 172 IYYYGLGVPKDDRQAIVWYQKGVDLGSMRARNSLAL-LYSQG 212
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +++GRGV KN KA D + K A +G + A + G++Y+E D +++ + Q
Sbjct: 98 GVAYENGRGVSKNYQKANDWYRKAAIQGYSKAAFNLGMLYFEGKGVPQDYRKSR-EWFMQ 156
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK-------LLYQASIA-GHVRAQYQLALCLHR-GRGV 213
AA + + +G Y V + YQ + G +RA+ LAL + G G
Sbjct: 157 AAAENNTMAMYAMGRIYYYGLGVPKDDRQAIVWYQKGVDLGSMRARNSLALLYSQGGDGF 216
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCG 267
+ +A + +A GYV A N + YS G E + H+++ W AA G
Sbjct: 217 YKDRVKALSLLIASACQGYVVAQNNLGVLYSDGAEDVIADHKKSYAWFSVAASNG 271
>gi|427785459|gb|JAA58181.1| Putative extracellular protein sel-1 [Rhipicephalus pulchellus]
Length = 781
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 13/214 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ GRGV ++ +AL F + A G+ AM G M+ E E A + AA
Sbjct: 401 YQGGRGVEQDHSRALGYFTQAANTGNANAMAFLGKMFLEGGSVVPQSNETAFKYFSMAAE 460
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNL 217
G+ GQ LG+ YL + V+ YQ A+ G V Q QL + G GV +
Sbjct: 461 KGNAVGQSGLGLMYLHGKGVEKDYQKAFKYFTLAANQGWVDGQLQLGNMYYNGLGVLRDF 520
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A ++Y A++ G+V A YN + ++ G G S A + K A+ G +L
Sbjct: 521 KMAIKYYTLASQSGHVLAFYNLAQMHATGTGTMRSCSTAAELFKNVAERGRWSEKLMQAY 580
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 311
+ +G + A+V G A IL
Sbjct: 581 SDYRDGRVDIALVKYAFLAELGYEVAQSNSAFIL 614
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 91/219 (41%), Gaps = 38/219 (17%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G GV + KAL + GA G+ A + G YW + EAA++ YR+ A + +
Sbjct: 285 GLGVNSSQAKALVYYTFGALGGNPFAQMALGYRYWYGNSVLTSCEAALTYYRKVAKVVEH 344
Query: 170 AGQFNLGISYLQEEAVKLL-------------------YQASIA--GHVRAQYQLA-LCL 207
N G S L + ++LL Y +A G V+AQ L L
Sbjct: 345 --DVNKGGSTLIQR-IRLLDEVENPGSSSGLIDDDLIQYYQFLADKGDVQAQVGLGQLHY 401
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAM-YNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
GRGV+ + A ++ +AA G AM + + G +P S+ A K+ AA+
Sbjct: 402 QGGRGVEQDHSRALGYFTQAANTGNANAMAFLGKMFLEGGSVVPQSNETAFKYFSMAAEK 461
Query: 267 GHGKAQLEHGLGLF------TEGEMMKAVVYLELATRAG 299
G+ Q GLGL E + KA Y LA G
Sbjct: 462 GNAVGQ--SGLGLMYLHGKGVEKDYQKAFKYFTLAANQG 498
>gi|406914641|gb|EKD53799.1| Sel1 protein [uncultured bacterium]
Length = 231
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+ V++N KA + + + A A + GLMY + + AI Y +A
Sbjct: 26 GHLYFSGKTVKQNYTKAFEYYERSAKHLYATAQFNLGLMYANGFGVLQNRTLAIEWYLKA 85
Query: 164 AVLGDPAGQFNLGISYLQE-----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
A QFNL Y + EA+ ++A+ + AQY L C G GV N
Sbjct: 86 AEQNYAPAQFNLACLYQSDPLTVHEAIDWYHKAAERDFLLAQYNLGWCYLHGFGVPRNEA 145
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----- 273
A +W +AAE A + CY G GL + A +W K+AA G KA L
Sbjct: 146 LAIQWITKAAEHALPDAERELAECYFQGIGLNEDKQLAAEWFKKAALQGDVKAILQLAKM 205
Query: 274 -EHGLGLFTEGEMMKAVVYLELAT 296
E G G+ + E + AV+ ELAT
Sbjct: 206 FETGDGV-PQDEELSAVLLRELAT 228
>gi|417518043|ref|ZP_12180488.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353650150|gb|EHC92596.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
Length = 288
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 55 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 114
Query: 157 ISLYRQAAVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
++ YR+AA G PA Q +LGI + +A+ +A+ +AQYQL +
Sbjct: 115 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 174
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA--- 264
G GV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 175 TGSGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYT 234
Query: 265 -----DCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297
DC A+ G T ++ + +L R
Sbjct: 235 EKSKDDCSALIAERNRLKGTLTPDQLSETYAAFDLIRR 272
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 78 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 137
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 138 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGSGVPENSRNALKWYLKAAEQG 197
Query: 268 HGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAADHVKNVI 310
AQL G ++ G + +A ++ +A+ E + D +I
Sbjct: 198 FTPAQLALG-EIYAHGRQGVPKDNKQAYIWYYMASIYTEKSKDDCSALI 245
>gi|422021066|ref|ZP_16367580.1| hypothetical protein OO7_00645 [Providencia sneebia DSM 19967]
gi|414099971|gb|EKT61604.1| hypothetical protein OO7_00645 [Providencia sneebia DSM 19967]
Length = 262
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 30/227 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+R+ G GV ++ A + F+K +G+ A G MY V G
Sbjct: 52 GERYFTGDGVSQDSKTAAEWFIKAGDKGNVDAQFRLGTMY-----------------VNG 94
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ E+A+ QA+ RA+ +A+ +G GV + +AA W+ +A
Sbjct: 95 -------FGVRRDYEKAMLWYEQAAKQNDTRAETNMAMMYAQGLGVTQDSTKAAFWFRKA 147
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
A+GG V A +N YS G G+ + + +A W ++AA K+Q G+ ++ EG+ +K
Sbjct: 148 AQGGNVIAQFNIGQMYSVGNGVDVDNEKAVFWFRKAAKQHDAKSQDRLGV-MYFEGKGVK 206
Query: 288 -----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
A +L A +G + ++ I ++L +A + D++
Sbjct: 207 KNLQQAYAWLSTAVYSGNKESHRLQQKIAEKLDENELKQAQKLADNY 253
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLAL 205
+ I +AA G+P QF LG Y + V + +A G+V AQ++L
Sbjct: 30 QQTIEQVTEAAHNGEPTSQFLLGERYFTGDGVSQDSKTAAEWFIKAGDKGNVDAQFRLGT 89
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
G GV + ++A WY +AA+ RA N ++ Y+ G G+ +A W ++AA
Sbjct: 90 MYVNGFGVRRDYEKAMLWYEQAAKQNDTRAETNMAMMYAQGLGVTQDSTKAAFWFRKAAQ 149
Query: 266 CGHGKAQLEHG 276
G+ AQ G
Sbjct: 150 GGNVIAQFNIG 160
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISL 159
R G + +G GVR++ +KA+ + + A + T A + +MY + D +AA
Sbjct: 85 FRLGTMYVNGFGVRRDYEKAMLWYEQAAKQNDTRAETNMAMMYAQGLGVTQDSTKAAF-W 143
Query: 160 YRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
+R+AA G+ QFN+G Y E+AV +A+ ++Q +L + G+
Sbjct: 144 FRKAAQGGNVIAQFNIGQMYSVGNGVDVDNEKAVFWFRKAAKQHDAKSQDRLGVMYFEGK 203
Query: 212 GVDFNLQEAARWYLRAAEGG 231
GV NLQ+A W A G
Sbjct: 204 GVKKNLQQAYAWLSTAVYSG 223
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
++ ++ + +A+ G +Q+ L G GV + + AA W+++A + G V A +
Sbjct: 30 QQTIEQVTEAAHNGEPTSQFLLGERYFTGDGVSQDSKTAAEWFIKAGDKGNVDAQFRLGT 89
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATR 297
Y G G+ + +A W ++AA +A+ + + GL + KA + A +
Sbjct: 90 MYVNGFGVRRDYEKAMLWYEQAAKQNDTRAETNMAMMYAQGLGVTQDSTKAAFWFRKAAQ 149
Query: 298 AGETAA 303
G A
Sbjct: 150 GGNVIA 155
>gi|384084304|ref|ZP_09995479.1| TPR repeat protein, SEL1 subfamily [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 509
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + G+GV KN A FLK A +G+ LA D G +Y++ + K A A + Y +A
Sbjct: 95 GTAYYQGQGVPKNYATANAWFLKAAQQGNALAETDMGNVYYQGQGVPKNYATADAWYLKA 154
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G + ++G Y Q + V Y +A+ G+ A+ L ++G GV
Sbjct: 155 AQQGYALAETDMGDDYAQGQGVPKNYATADAWYLKAAQQGYALAEGSLGTAYYQGHGVPK 214
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N A W+L+AA+ G A Y G+G+P ++ A W +AA G+ A+ +
Sbjct: 215 NQATANAWFLKAAQQGNALAENIIGDAYYKGQGVPKNYATADTWFLKAAQQGNALAETDM 274
Query: 276 GLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
G G + +G+ + A + A + G+ A+ + +Q ++ A D+W
Sbjct: 275 G-GAYYKGQGVSKNYVTADAWFLKAAQQGDALAETAMGLAYEQGRGVPKNYA--TADAW 330
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 12/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + G+GV KN A +LK A +G LA G Y++ + K +A A + + +A
Sbjct: 167 GDDYAQGQGVPKNYATADAWYLKAAQQGYALAEGSLGTAYYQGHGVPKNQATANAWFLKA 226
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + +G +Y + + V Y +A+ G+ A+ + ++G+GV
Sbjct: 227 AQQGNALAENIIGDAYYKGQGVPKNYATADTWFLKAAQQGNALAETDMGGAYYKGQGVSK 286
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N A W+L+AA+ G A L Y G G+P ++ A W +AA G A+
Sbjct: 287 NYVTADAWFLKAAQQGDALAETAMGLAYEQGRGVPKNYATADAWFLKAAQQGDALAETFM 346
Query: 276 G 276
G
Sbjct: 347 G 347
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + G GV KN A FLK A +G+ LA G Y++ + K A A + + +A
Sbjct: 203 GTAYYQGHGVPKNQATANAWFLKAAQQGNALAENIIGDAYYKGQGVPKNYATADTWFLKA 262
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + ++G +Y + + V Y +A+ G A+ + L +GRGV
Sbjct: 263 AQQGNALAETDMGGAYYKGQGVSKNYVTADAWFLKAAQQGDALAETAMGLAYEQGRGVPK 322
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSF--GEGLPLSHRQARKWMKRAADCGHGKAQ 272
N A W+L+AA+ G A+ T + Y++ G+G+P + A W +A G A+
Sbjct: 323 NYATADAWFLKAAQQG--DALAETFMGYAYDQGQGVPKNQATADAWFLKADQQGKASAK 379
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFN 174
+G NL K + A +G +A G Y+ AA + +AA G+ + +
Sbjct: 38 KGDTSNLKK----LEQAAVKGDVIAQTWLGGYYYGKKSYRAADVWFLKAAQQGNINAEQS 93
Query: 175 LGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
+G +Y Q + V Y +A+ G+ A+ + ++G+GV N A WYL+
Sbjct: 94 IGTAYYQGQGVPKNYATANAWFLKAAQQGNALAETDMGNVYYQGQGVPKNYATADAWYLK 153
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
AA+ GY A + Y+ G+G+P ++ A W +AA G+ A+ G +
Sbjct: 154 AAQQGYALAETDMGDDYAQGQGVPKNYATADAWYLKAAQQGYALAEGSLGTAYY 207
>gi|189501501|ref|YP_001957218.1| Sel1 domain-containing protein [Candidatus Amoebophilus asiaticus
5a2]
gi|189496942|gb|ACE05489.1| Sel1 domain protein repeat-containing protein [Candidatus
Amoebophilus asiaticus 5a2]
Length = 763
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLH 208
IS R+ A +G+ Q NLG Y +A+K +A+ AG+V AQ L
Sbjct: 336 ISNIRRHAKMGNVLAQNNLGYMYRNGVEFPLDYTKAIKWYTRAAKAGNVLAQTNLGYMYD 395
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+G GV N ++A +WY RAA+ GY A N L Y G+ +R+A KW +AA+ +
Sbjct: 396 KGLGVAPNSKQANKWYKRAAKQGYAAAQTNLGLSYQKELGVAQDYRKAFKWCMKAAEQAY 455
Query: 269 GKAQLEHGL 277
G AQ G+
Sbjct: 456 GDAQANLGI 464
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 18/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-------KEAAISLY 160
G +++G + KA+ + + A G+ LA + G MY DK + A Y
Sbjct: 355 GYMYRNGVEFPLDYTKAIKWYTRAAKAGNVLAQTNLGYMY---DKGLGVAPNSKQANKWY 411
Query: 161 RQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA G A Q NLG+SY +E +A K +A+ + AQ L + G G
Sbjct: 412 KRAAKQGYAAAQTNLGLSYQKELGVAQDYRKAFKWCMKAAEQAYGDAQANLGIIYRDGLG 471
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
++ N ++A WY RAA A + + + G G P+ H + W+ ++ +
Sbjct: 472 IEKNYEQALMWYTRAASLENRVAQAHLACMHMRGCGTPIDHDKGIYWLMKSEN 524
>gi|237746289|ref|ZP_04576769.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377640|gb|EEO27731.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 293
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 139 AMVDAGLMYWE---MDKK-EAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVK 186
AM G MY E ++K E A + Y +AA LG P QFNLG+SY EAVK
Sbjct: 77 AMTLIGYMYDEGLGVEKNPETANTWYLKAAELGSPVAQFNLGLSYEYGSGTPKNMAEAVK 136
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
+A+ + +A+ ++ G GV + EA +WY RAAE G A + L Y G
Sbjct: 137 WFRKAAEQKYAKAESKMWYLTVTGNGVKKDYHEAMKWYRRAAEHGDHGAYADIGLFYDKG 196
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQL 273
EG+ +A ++ A+ G+G+AQL
Sbjct: 197 EGVRKDPNRAVQYYILGAEKGNGRAQL 223
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+E++ L + H +A + G GV+ N + A WYL+AAE G A +N L
Sbjct: 60 QESMSYLMKPDTVTHPKAMTLIGYMYDEGLGVEKNPETANTWYLKAAELGSPVAQFNLGL 119
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
Y +G G P + +A KW ++AA+ + KA+
Sbjct: 120 SYEYGSGTPKNMAEAVKWFRKAAEQKYAKAE 150
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 51/213 (23%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------------ 147
+AM L+ G + G GV KN + A +LK A GS +A + GL Y
Sbjct: 76 KAMTLI--GYMYDEGLGVEKNPETANTWYLKAAELGSPVAQFNLGLSYEYGSGTPKNMAE 133
Query: 148 --------------------WEMD------KKE--AAISLYRQAAVLGDPAGQFNLGISY 179
W + KK+ A+ YR+AA GD ++G+ Y
Sbjct: 134 AVKWFRKAAEQKYAKAESKMWYLTVTGNGVKKDYHEAMKWYRRAAEHGDHGAYADIGLFY 193
Query: 180 LQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
+ E AV+ + G+ RAQ LA +G G+ + + A WY AA+ G
Sbjct: 194 DKGEGVRKDPNRAVQYYILGAEKGNGRAQLFLADSYAKGNGIRQDNERALYWYREAAKNG 253
Query: 232 YVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRA 263
V AM + Y+ G G+ + ++++W++ A
Sbjct: 254 NVMAMQELAAIYAKGRLGVRKNEAESQRWLEMA 286
>gi|222055441|ref|YP_002537803.1| Sel1 domain-containing protein repeat-containing protein [Geobacter
daltonii FRC-32]
gi|221564730|gb|ACM20702.1| Sel1 domain protein repeat-containing protein [Geobacter daltonii
FRC-32]
Length = 271
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
G G+ K+ +A+ FL+ A A GL Y D E A +R AA GD
Sbjct: 92 GWGIEKDRREAIRWFLEAAGHHHAQAQNALGLAYSSGEGVRQDDTEGA-RWFRLAAEQGD 150
Query: 169 PAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
QFNL G+ + EA K +A+ G +AQ L R GV +L+EA
Sbjct: 151 VDAQFNLSCMYYNGWGVEQDKHEAAKWCMKAAAQGDPQAQCVLGSMYVRNEGVKQDLKEA 210
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
RW+ R AE G A +N ++ Y G+G+ + R+A KW ++AA+ G
Sbjct: 211 MRWFRRGAEQGNPIAQHNLAVLYEDGKGVEKNLREAIKWYRQAAEQG 257
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G GVR++ + F A +G A + MY+ E DK EAA +
Sbjct: 122 GLAYSSGEGVRQDDTEGARWFRLAAEQGDVDAQFNLSCMYYNGWGVEQDKHEAA-KWCMK 180
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA GDP Q LG Y++ E VK + + G+ AQ+ LA+ G+GV+
Sbjct: 181 AAAQGDPQAQCVLGSMYVRNEGVKQDLKEAMRWFRRGAEQGNPIAQHNLAVLYEDGKGVE 240
Query: 215 FNLQEAARWYLRAAEGG 231
NL+EA +WY +AAE G
Sbjct: 241 KNLREAIKWYRQAAEQG 257
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 157 ISLYRQAAVLGDPAGQFNLG-ISYLQEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
I+ R A G+ A F + IS ++++ V L+ +A+ G+ +AQY+L L G G++
Sbjct: 37 IASIRGGAAEGNSADFFEIDDISPVEKQNRVSLIKKAARDGYAQAQYELGCMLFTGWGIE 96
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ +EA RW+L AA + +A L YS GEG+ + +W + AA+ G AQ
Sbjct: 97 KDRREAIRWFLEAAGHHHAQAQNALGLAYSSGEGVRQDDTEGARWFRLAAEQGDVDAQF 155
>gi|397676938|ref|YP_006518476.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397627|gb|AFN56954.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 202
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLA 204
KE A+ Y++AA GD QF LG +Y + V Y+ ++ G AQY L
Sbjct: 67 KEKAVFWYQKAANQGDAGAQFLLGRAYYLGDGVSQDYEKAVFWWQKSANQGIADAQYNLG 126
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L + G G+ + ++A WY +AA GY A Y FG+G+ A W+++AA
Sbjct: 127 LAYYNGAGMPKSDEKAVFWYQKAANQGYADAQLKLGAAYYFGKGVAQDKGTAHFWIQQAA 186
Query: 265 DCGHGKAQ 272
D G+ KA+
Sbjct: 187 DKGNAKAK 194
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G++ +E+AV +A+ G AQ+ L + G GV + ++A W+ ++A G A
Sbjct: 62 GVAQDKEKAVFWYQKAANQGDAGAQFLLGRAYYLGDGVSQDYEKAVFWWQKSANQGIADA 121
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
YN L Y G G+P S +A W ++AA+ G+ AQL+ G +
Sbjct: 122 QYNLGLAYYNGAGMPKSDEKAVFWYQKAANQGYADAQLKLGAAYY 166
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
AG+ AQ +L + G GV + ++A WY +AA G A + Y G+G+ +
Sbjct: 44 AGYADAQLKLWAAYYSGEGVAQDKEKAVFWYQKAANQGDAGAQFLLGRAYYLGDGVSQDY 103
Query: 254 RQARKWMKRAADCGHGKAQLEHGLGLFTEGEM----MKAVVYLELATRAG 299
+A W +++A+ G AQ GL + M KAV + + A G
Sbjct: 104 EKAVFWWQKSANQGIADAQYNLGLAYYNGAGMPKSDEKAVFWYQKAANQG 153
>gi|427785461|gb|JAA58182.1| Putative extracellular protein sel-1 [Rhipicephalus pulchellus]
Length = 781
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 13/214 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ GRGV ++ +AL F + A G+ AM G M+ E E A + AA
Sbjct: 401 YQGGRGVEQDHSRALGYFTQAANTGNANAMAFLGKMFLEGGSVVPQSNETAFKYFSMAAE 460
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNL 217
G+ GQ LG+ YL + V+ YQ A+ G V Q QL + G GV +
Sbjct: 461 KGNAVGQSGLGLMYLHGKGVEKDYQKAFKYFTLAANQGWVDGQLQLGNMYYNGLGVLRDF 520
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A ++Y A++ G+V A YN + ++ G G S A + K A+ G +L
Sbjct: 521 KMAIKYYTLASQSGHVLAFYNLAQMHATGTGTMRSCSTAAELFKNVAERGRWSEKLMQAY 580
Query: 278 GLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 311
+ +G + A+V G A IL
Sbjct: 581 SDYRDGRVDIALVKYAFLAELGYEVAQSNSAFIL 614
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 91/219 (41%), Gaps = 38/219 (17%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G GV + KAL + GA G+ A + G YW + EAA++ YR+ A + +
Sbjct: 285 GLGVNSSQAKALVYYTFGALGGNPFAQMALGYRYWYGNSVLTSCEAALTYYRKVAKVVEH 344
Query: 170 AGQFNLGISYLQEEAVKLL-------------------YQASIA--GHVRAQYQLA-LCL 207
N G S L + ++LL Y +A G V+AQ L L
Sbjct: 345 --DVNKGGSTLIQR-IRLLDEVENPGSSSGLIDDDLIQYYQFLADKGDVQAQVGLGQLHY 401
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAM-YNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
GRGV+ + A ++ +AA G AM + + G +P S+ A K+ AA+
Sbjct: 402 QGGRGVEQDHSRALGYFTQAANTGNANAMAFLGKMFLEGGSVVPQSNETAFKYFSMAAEK 461
Query: 267 GHGKAQLEHGLGLF------TEGEMMKAVVYLELATRAG 299
G+ Q GLGL E + KA Y LA G
Sbjct: 462 GNAVGQ--SGLGLMYLHGKGVEKDYQKAFKYFTLAANQG 498
>gi|436713011|ref|ZP_20518716.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|434989479|gb|ELL81030.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
Length = 227
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 13/165 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G + K+ + AL+ + + AA+G A G+M+ + + + A++ YR+A
Sbjct: 1 GVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKA 60
Query: 164 AVLGDPAGQFNLGI--------SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G PA Q +LGI + +A+ +A+ +AQYQL + GRGV
Sbjct: 61 ARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPE 120
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKW 259
N + A +WYL+AAE G+ A Y+ G +G+P ++QA W
Sbjct: 121 NSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIW 165
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCL 207
A+ YR+AA G Q +G+ ++Q E V YQ ++A G AQ L +
Sbjct: 17 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 76
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + ++A WY +AA+ + +A Y + YS G G+P + R A KW +AA+ G
Sbjct: 77 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 136
Query: 268 HGKAQLEHG 276
AQL G
Sbjct: 137 FTPAQLALG 145
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 250
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 24 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 83
Query: 251 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 281
S RQA W ++AA KAQ + G+ T
Sbjct: 84 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 114
>gi|156378243|ref|XP_001631053.1| predicted protein [Nematostella vectensis]
gi|156218086|gb|EDO38990.1| predicted protein [Nematostella vectensis]
Length = 197
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA-A 156
+ G F+HG+GV K+L+ A + + A+ G A+ + L + E + K EA A
Sbjct: 11 LAQFNLGLCFEHGKGVDKDLNAAAECYKLAASLGHGGALYNLALYHMEGIGGLAKDEAKA 70
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLH 208
+ L AA G Q LGI Y E +A L QA G A+Y L +C
Sbjct: 71 LELLELAAQSGTWKAQCYLGIYYADESSNHVDYDKAFSYLDQAVAKGDPTAEYYLGVCYE 130
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAADCG 267
RG GV+ N+ +A Y AA+ G + A +N + Y G G + ++A ++ + AA+ G
Sbjct: 131 RGLGVERNINKAGHLYKSAAKNGNISAQFNMGVFYEHGLGDYDVDRQEALRYYRMAAEAG 190
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 191 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGL 249
AS GH AQ+ L LC G+GVD +L AA Y AA G+ A+YN +L + G GL
Sbjct: 4 ASNNGHPLAQFNLGLCFEHGKGVDKDLNAAAECYKLAASLGHGGALYNLALYHMEGIGGL 63
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG----EMMKAVVYLELATRAGETAADH 305
+A + ++ AA G KAQ G+ E + KA YL+ A G+ A++
Sbjct: 64 AKDEAKALELLELAAQSGTWKAQCYLGIYYADESSNHVDYDKAFSYLDQAVAKGDPTAEY 123
Query: 306 VKNVILQQLSATSRD 320
V ++ R+
Sbjct: 124 YLGVCYERGLGVERN 138
>gi|148558507|ref|YP_001257764.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
gi|148369792|gb|ABQ62664.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
Length = 978
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIG 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 758 SFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 817
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 818 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKNAAEKRDQIAKALKPEMLT 877
Query: 321 RAMLVVDSWRAMP 333
RA V+ W+A P
Sbjct: 878 RAKGAVELWKAKP 890
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N +K AA+ LA D G
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAEN--------VKEAAKWYQLA-ADQGF------ 749
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 750 ----APAQYR--------IGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFA 797
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 798 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 857
Query: 269 GKA 271
A
Sbjct: 858 KNA 860
>gi|444921868|ref|ZP_21241696.1| Putative protein YbeQ [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507036|gb|ELV07220.1| Putative protein YbeQ [Wohlfahrtiimonas chitiniclastica SH04]
Length = 264
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
++ G F +G GV ++ +AL + A +G++ A + GLM+ + AI Y
Sbjct: 76 VKIGLMFYNGEGVPQSYTEALKWYKLAAEQGNSDAQIKIGLMFHNGVGVLKNYSEAIKWY 135
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRG 212
+ A+ GD + LG ++ E V Y ++ G+ A+ Q+ L + G G
Sbjct: 136 KLASAKGDDIASYFLGNIFIDGEGVPQNYSEALKWYKLSAKQGNADAKTQIGLMFYNGEG 195
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
VD N EA +W+ AAE A + + G+G+ ++++A++W +A D G
Sbjct: 196 VDQNYFEAKKWFALAAEQNEGIAQALLGMMFYEGQGVKHNYKEAKEWFGKACDNG 250
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 23/237 (9%)
Query: 63 SLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLD 122
+L F++ A +F+ +L+ L+ + N A +LL G F G + ++
Sbjct: 8 ALIFNI--SFAKTFSSEELKKFHLMAEQGNVG------AQMLL--GNIFYDGENLPQSYT 57
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFNLGIS 178
+AL + A +G+ A V GLM++ + A+ Y+ AA G+ Q +G+
Sbjct: 58 EALKWYKLAAEQGNIYAPVKIGLMFYNGEGVPQSYTEALKWYKLAAEQGNSDAQIKIGLM 117
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
+ EA+K AS G A Y L G GV N EA +WY +A+
Sbjct: 118 FHNGVGVLKNYSEAIKWYKLASAKGDDIASYFLGNIFIDGEGVPQNYSEALKWYKLSAKQ 177
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
G A L + GEG+ ++ +A+KW AA+ G AQ G+ +F EG+ +K
Sbjct: 178 GNADAKTQIGLMFYNGEGVDQNYFEAKKWFALAAEQNEGIAQALLGM-MFYEGQGVK 233
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
E +K + + G+V AQ L + G + + EA +WY AAE G + A L
Sbjct: 22 EELKKFHLMAEQGNVGAQMLLGNIFYDGENLPQSYTEALKWYKLAAEQGNIYAPVKIGLM 81
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATR 297
+ GEG+P S+ +A KW K AA+ G+ AQ++ GL +F G +A+ + +LA+
Sbjct: 82 FYNGEGVPQSYTEALKWYKLAAEQGNSDAQIKIGL-MFHNGVGVLKNYSEAIKWYKLASA 140
Query: 298 AGETAADH 305
G+ A +
Sbjct: 141 KGDDIASY 148
>gi|443724592|gb|ELU12527.1| hypothetical protein CAPTEDRAFT_96009 [Capitella teleta]
Length = 191
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
EA +L AS G+ +A Y LA+C G+GV ++ +AA+ Y AA G +++YN SL
Sbjct: 18 EAFQLWEHASSKGYAKASYNLAICYETGKGVPQDMSQAAKLYHIAASQGCSKSLYNLSLM 77
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG---EMMKAVVYLELATRAG 299
Y G G+ +A++ +++AA G +AQ E G+ ++TE +M KA A +
Sbjct: 78 YMDGCGVTRDENKAKQLLEKAAASGLKQAQTELGV-IYTEHKHRDMQKAASLFSWAAKQQ 136
Query: 300 ETAADHVKNVILQQ 313
++AA + + +Q
Sbjct: 137 DSAAQYYLGICYEQ 150
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD------KKEAAISLYRQAA 164
++ G+GV +++ +A + A++G + ++ + LMY MD + A L +AA
Sbjct: 42 YETGKGVPQDMSQAAKLYHIAASQGCSKSLYNLSLMY--MDGCGVTRDENKAKQLLEKAA 99
Query: 165 VLGDPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G Q LG+ Y + ++A L A+ AQY L +C +G GV N
Sbjct: 100 ASGLKQAQTELGVIYTEHKHRDMQKAASLFSWAAKQQDSAAQYYLGICYEQGLGVPCNPC 159
Query: 219 EAARWYLRAAEGGYVRAMYN 238
+AA Y ++A GY+ A +N
Sbjct: 160 KAAELYRQSANAGYLSAYHN 179
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
N EA + + A+ GY +A YN ++CY G+G+P QA K AA G K+
Sbjct: 15 NYNEAFQLWEHASSKGYAKASYNLAICYETGKGVPQDMSQAAKLYHIAASQGCSKS 70
>gi|414176338|ref|ZP_11430567.1| hypothetical protein HMPREF9695_04213 [Afipia broomeae ATCC 49717]
gi|410886491|gb|EKS34303.1| hypothetical protein HMPREF9695_04213 [Afipia broomeae ATCC 49717]
Length = 1098
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 12/181 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRG 212
R AA G+P F +G+ Y + V Y +AS G V A ++L +G G
Sbjct: 874 RNAANRGEPGAAFEIGVRYAEGRGVASDYATAAKWYERASEGGIVPATFRLGTLYEKGLG 933
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ +++ A YL+AAE G +AM+N ++ + G G +++ A +W ++AA+ G +Q
Sbjct: 934 LKKDVETARNLYLQAAEKGSAKAMHNLAVLDADGGGAGPNYKSASQWFRKAAERGVADSQ 993
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
G+ G+ E + ++ + LA G+ + ++ I ++L A S A L +
Sbjct: 994 FNLGILYARGIGVEQNLAESFKWFSLAAAQGDADSGRKRDDIAKRLDAQSLAAAKLATQT 1053
Query: 329 W 329
+
Sbjct: 1054 F 1054
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L A+ G A +++ + GRGV + AA+WY RA+EGG V A + Y G
Sbjct: 873 LRNAANRGEPGAAFEIGVRYAEGRGVASDYATAAKWYERASEGGIVPATFRLGTLYEKGL 932
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
GL AR +AA+ G KA H L +
Sbjct: 933 GLKKDVETARNLYLQAAEKGSAKAM--HNLAVL 963
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 33/131 (25%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLY 160
R G ++ G G++K+++ A + +L+ A +GS AM + ++ + ++A +
Sbjct: 922 FRLGTLYEKGLGLKKDVETARNLYLQAAEKGSAKAMHNLAVLDADGGGAGPNYKSASQWF 981
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
R+AA G QFNLGI Y RG GV+ NL E+
Sbjct: 982 RKAAERGVADSQFNLGILYA----------------------------RGIGVEQNLAES 1013
Query: 221 ARWY-LRAAEG 230
+W+ L AA+G
Sbjct: 1014 FKWFSLAAAQG 1024
>gi|294853408|ref|ZP_06794080.1| peptidoglycan-binding protein [Brucella sp. NVSL 07-0026]
gi|294819063|gb|EFG36063.1| peptidoglycan-binding protein [Brucella sp. NVSL 07-0026]
Length = 978
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIG 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 758 SFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 817
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 818 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 877
Query: 321 RAMLVVDSWRAMP 333
RA V+ W+A P
Sbjct: 878 RAKGAVELWKAKP 890
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N +K AA+ LA D G
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAEN--------VKEAAKWYQLA-ADQGF------ 749
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 750 ----APAQYR--------IGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFA 797
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 798 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 857
Query: 269 GKA 271
A
Sbjct: 858 KDA 860
>gi|432861889|ref|ZP_20086649.1| hypothetical protein A311_02381 [Escherichia coli KTE146]
gi|431405636|gb|ELG88869.1| hypothetical protein A311_02381 [Escherichia coli KTE146]
Length = 655
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A G+MY + + IS R+ A
Sbjct: 339 GKMYYEGDEVSQDLKLAFNWFTRAAQHNDIDAQYALGIMYRDGRGTDKNISEARKWFLLA 398
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ + IS EEA++ A+ GH RAQY L G GV
Sbjct: 399 AQNGNTSAQYEIARISRFAVEPLRNYEEALRWYLSAATQGHERAQYDLGQMYIHGIGVAR 458
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH---GKAQ 272
+ +A RW L++AE GY+ A Y+T+ YS E + +A W + A G G+A
Sbjct: 459 DKVQAHRWLLQSAEQGYLYAQYHTARLYSESESILQDQEKALYWFTKVAKNGTDGAGEAM 518
Query: 273 LEHGLGLFTEGE 284
E G T +
Sbjct: 519 YELGKYYLTNND 530
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR LRW G+ + HG GV ++ +A L+ A +G
Sbjct: 417 AVEPLRNYEEALRWYLSAATQGHERAQYDLGQMYIHGIGVARDKVQAHRWLLQSAEQGYL 476
Query: 138 LAMVDAGLMYWE----MDKKEAAISLYRQAAVLG-DPAGQ--FNLGISYLQE-------- 182
A +Y E + +E A+ + + A G D AG+ + LG YL
Sbjct: 477 YAQYHTARLYSESESILQDQEKALYWFTKVAKNGTDGAGEAMYELGKYYLTNNDDPENNA 536
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA++ + A+ G + A + LA + L+ + + + A WY +AA G A + T++
Sbjct: 537 EAIQWITGAAQRGRIEAIFLLAEMYLYGTKDIAKDENHALHWYEKAARLGSTEAQHQTAV 596
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 597 MYAQGTGTKIDNKQAWMWLTIAGN 620
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ Y + A+ G+ A Y L + G V +L+ A W+ RAA+ + A
Sbjct: 311 GLYYYPSSVFQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNDIDA 370
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
Y + Y G G + +ARKW AA G+ AQ E
Sbjct: 371 QYALGIMYRDGRGTDKNISEARKWFLLAAQNGNTSAQYE 409
>gi|410634930|ref|ZP_11345555.1| hypothetical protein GLIP_0105 [Glaciecola lipolytica E3]
gi|410145504|dbj|GAC12760.1| hypothetical protein GLIP_0105 [Glaciecola lipolytica E3]
Length = 773
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 108 GKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQ 162
G + +G+ G++++ +A+ + K AA+G++ AM + GL++ D + + S YR+
Sbjct: 586 GYNYAYGKEGLKQSYAQAVYWYQKAAAQGNSGAMNNLGLLHSRGDGVKQSYSEAAKWYRK 645
Query: 163 AAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A+ LGD NLG Y E V KL ++ H A L HRG GV
Sbjct: 646 ASDLGDAIAANNLGSLYRDGEGVPQSHAEANKLFRKSIDLKHYGAYVNLGFQYHRGNGVT 705
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ EA ++Y AAE G N + Y G G+ S +A KW + AA G AQ
Sbjct: 706 KSYTEAVKYYRIAAEQGEKYGQLNLGVMYENGHGVTKSESEAIKWYRLAAKQGVESAQ 763
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
G+ L SY Q AV +A+ G+ A L L RG GV + EAA+WY +A++
Sbjct: 592 GKEGLKQSYAQ--AVYWYQKAAAQGNSGAMNNLGLLHSRGDGVKQSYSEAAKWYRKASDL 649
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMM 286
G A N Y GEG+P SH +A K +++ D H A + G G
Sbjct: 650 GDAIAANNLGSLYRDGEGVPQSHAEANKLFRKSIDLKHYGAYVNLGFQYHRGNGVTKSYT 709
Query: 287 KAVVYLELATRAGE 300
+AV Y +A GE
Sbjct: 710 EAVKYYRIAAEQGE 723
>gi|408532397|emb|CCK30571.1| hypothetical protein BN159_6192 [Streptomyces davawensis JCM 4913]
Length = 1500
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLG-ISYLQE--EA 184
F A GS AMVD G + E + E A R+AA GD +LG + Y Q+ +A
Sbjct: 668 FELAVAAGSVAAMVDLGRLL-EESEPETAREWLRRAADAGDDEAMNSLGTLLYTQDPDQA 726
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
+L QA+ G++ A L L L G G + EA RW+ +AAE G AM N +
Sbjct: 727 RELFRQAAGTGNLLAMNNLGLILTEGGG---DAAEAERWFRQAAEEGNEEAMLNLGTVLA 783
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 304
H A W++RAA+ GH +A G+ L +G A + A AG T D
Sbjct: 784 RRR----DHTGALHWLERAAEAGHPEAMRNLGIELNVDGLTQGARYWFRRAVEAGNT--D 837
Query: 305 HVKNVILQ 312
+ N+ +Q
Sbjct: 838 ALLNLAVQ 845
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 13/189 (6%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-AISLYRQAAVLGDPAGQFNLGI 177
++ D+A + F + A G+ LAM + GL+ E A A +RQAA G+ NLG
Sbjct: 721 QDPDQARELFRQAAGTGNLLAMNNLGLILTEGGGDAAEAERWFRQAAEEGNEEAMLNLGT 780
Query: 178 SYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+ A+ L +A+ AGH A L + L+ VD Q A W+ RA E G
Sbjct: 781 VLARRRDHTGALHWLERAAEAGHPEAMRNLGIELN----VDGLTQGARYWFRRAVEAGNT 836
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 293
A+ N ++ + G R W++R + GHG G EG+ A+ Y
Sbjct: 837 DALLNLAVQAAIQGGA----DGYRTWLERGVEAGHGMCMYALGDLESQEGDEEAALRYYT 892
Query: 294 LATRAGETA 302
A AGE +
Sbjct: 893 QAAEAGEPS 901
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV---- 185
+ A RG+ A+ + G++ + D AA +RQAA LGDP N+ + E+++
Sbjct: 1355 QAAERGNAAALYNLGVLVMDEDPP-AADRYWRQAADLGDPDAMNNVALRLEDEDSLDAAE 1413
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 238
+LL +A+ G+V A L L R +D EA W+ RAAE G AMYN
Sbjct: 1414 ELLERAAATGNVNAMNSLGSLLSRLDRID----EAVDWWERAAEQGDANAMYN 1462
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 80/191 (41%), Gaps = 23/191 (12%)
Query: 139 AMVDAGL-MYWEMDKKEAAISLYRQAAVLGDPAGQFNLG---ISYLQEEAVKLLYQASIA 194
AM++ G + +E D + A +RQAA G +NLG + +EA L +A+ A
Sbjct: 1207 AMLNHGTYLRFEADDPDGARHWFRQAAEAGSALAMYNLGELLVEDDPDEARDWLRRAAEA 1266
Query: 195 GHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
G A L LC G L+ W+ RAA G AM N GL L
Sbjct: 1267 GDADAMNLLGVLCAEEG------LEAEHDWFRRAAYAGSEGAMNNL--------GLVLRD 1312
Query: 254 RQ---ARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
R AR W + AA+ G + L L E + +A +LE A G AA + V+
Sbjct: 1313 RDAQGARLWFRLAAEAGLDEGMRNLALTLLDE-DPPEARHWLEQAAERGNAAALYNLGVL 1371
Query: 311 LQQLSATSRDR 321
+ + DR
Sbjct: 1372 VMDEDPPAADR 1382
>gi|261217417|ref|ZP_05931698.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
gi|261320291|ref|ZP_05959488.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
gi|260922506|gb|EEX89074.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
gi|261292981|gb|EEX96477.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
Length = 978
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIG 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 758 SFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 817
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 818 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 877
Query: 321 RAMLVVDSWRAMP 333
RA V+ W+A P
Sbjct: 878 RAKGAVELWKAKP 890
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N +K AA+ LA D G
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAEN--------VKEAAKWYQLA-ADQGF------ 749
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 750 ----APAQYR--------IGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFA 797
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 798 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 857
Query: 269 GKA 271
A
Sbjct: 858 KDA 860
>gi|339483599|ref|YP_004695385.1| Sel1 domain-containing protein [Nitrosomonas sp. Is79A3]
gi|338805744|gb|AEJ01986.1| Sel1 domain protein repeat-containing protein [Nitrosomonas sp.
Is79A3]
Length = 224
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 169 PAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV---------DFNLQE 219
PAG +G EE K L + + AG+ AQ L + + G V D + +
Sbjct: 68 PAG---VGDVKTAEEKFKALMEDAKAGNPAAQNGLGVMYYTGEAVSKSPSGQLLDNDPEV 124
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
AA W+ RAAE GY A +N L Y+ GEG+P QA + K+AA+ GH AQ G
Sbjct: 125 AAGWFFRAAEQGYADAQFNLGLMYANGEGIPQDMAQAAELFKKAAEQGHVDAQNNLGAMY 184
Query: 280 FT 281
FT
Sbjct: 185 FT 186
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 29/222 (13%)
Query: 47 FSCSRSIKSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLR 106
C KS + + +SLP N++ +P L N+ L+E ++
Sbjct: 17 IGCGEESKSDK-SEISSLP-KPTNEVTKLGEIPSFIGEGLT----NEEKAELKEQIL--- 67
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166
G G K ++ + ++ A G+ A G+MY Y AV
Sbjct: 68 -----PAGVGDVKTAEEKFKALMEDAKAGNPAAQNGLGVMY------------YTGEAVS 110
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
P+GQ + E A ++A+ G+ AQ+ L L G G+ ++ +AA + +
Sbjct: 111 KSPSGQL---LDNDPEVAAGWFFRAAEQGYADAQFNLGLMYANGEGIPQDMAQAAELFKK 167
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
AAE G+V A N Y G+G+ ++A +W ++AA G+
Sbjct: 168 AAEQGHVDAQNNLGAMYFTGDGVARDEKKAIEWFEKAAAQGN 209
>gi|261750518|ref|ZP_05994227.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
513]
gi|261740271|gb|EEY28197.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
513]
Length = 942
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 175 LGISYLQEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+ I + EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G
Sbjct: 691 IEIPSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNA 750
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAV 289
AM+N ++ ++ G + A +W AA+ G +Q G+ GL + ++
Sbjct: 751 SAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESY 810
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 333
+ LA AG+ A ++ I + L RA V+ W+A P
Sbjct: 811 KWFALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 854
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G+ A + LA
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLA 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G + A RW+ AAE G + YN + + G G+P++ ++ KW AA
Sbjct: 758 VLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAA 817
Query: 265 DCGHGKA 271
+ G A
Sbjct: 818 NAGDKDA 824
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 38/144 (26%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-- 149
LREA L G R+ GRGV +N+ +A + A +G+ AM + +++
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLAVLFATGT 764
Query: 150 --MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCL 207
AA+ + +AA LG Q+NLGI
Sbjct: 765 NGTPDNAAAVRWFTEAAELGVKDSQYNLGI----------------------------LA 796
Query: 208 HRGRGVDFNLQEAARWYLRAAEGG 231
+G G+ NL+E+ +W+ AA G
Sbjct: 797 AKGLGMPVNLEESYKWFALAANAG 820
>gi|406880646|gb|EKD28944.1| hypothetical protein ACD_79C00146G0001, partial [uncultured
bacterium]
Length = 666
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 112/267 (41%), Gaps = 53/267 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + +G GV K+L +A+ F K +G++ + G +Y + + E A + Y +A
Sbjct: 395 GLMYYNGEGVEKDLKQAVYWFTKAGEQGNSDSQNKLGTIYGQGEGVEKDYKLAFNWYTKA 454
Query: 164 AVLGDPAGQFNLGISYLQ------------------------------------------ 181
A + Q+NLG YL
Sbjct: 455 AEHNEKV-QYNLGFLYLNGQGVEKDLKQAVYWFKKSADNLCVNAQYILSKMYYNGEGVEK 513
Query: 182 --EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+EA+K + +A+ G A+Y L G ++ + ++A +W+ +A++ G A YN
Sbjct: 514 DYKEAIKWITKAAEQGDGVAEYNLGWMYFNGECIEKDYKQAYKWFKQASKSGIADAQYNL 573
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-LGLFTEG---EMMKAVVYLELA 295
L Y GEG+ ++A KW +AA+ G AQ G + EG + +KA ++ LA
Sbjct: 574 GLMYYNGEGVTQDFKEAFKWFTKAAEQGDVDAQNMIGTMYALNEGVIQDYIKAHMWFNLA 633
Query: 296 TRAGETAADHVKNVILQQLSATSRDRA 322
G A ++ I Q+L+ + A
Sbjct: 634 CANGNNQAKENRDKIAQKLTQQQIEEA 660
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVL------ 166
+++ AL + A +G A+ MY+ D +KE R +L
Sbjct: 30 KRDYKTALKELKESAEQGDPYALYQIAWMYYVGDGVTRNQKEVENYAERANKILKPLADK 89
Query: 167 GDPAGQFNLGISYLQEEAVKL---------------LYQASIAGHVRAQYQLALCLHRGR 211
GDP Q+NLG Y VK +A+ G AQ ++ L +G
Sbjct: 90 GDPEAQYNLGEMYKYGIGVKQDIELANTYFMPAFEKYKKAAEKGDSEAQKKVGLMYLKGY 149
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV +L +A +WYL+AAE G + A N Y G G+ + +A +W +A + G+ A
Sbjct: 150 GVSTDLTQAFQWYLKAAEQGNLEAQVNIGGAYRTGYGVNQDYNKALEWFTKATEQGNADA 209
Query: 272 QLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQ 313
Q G ++ +GE + KA +L A G+ A I Q+
Sbjct: 210 QRNLG-SMYYKGEGVKKDTKKAFEWLTKAVEQGDINAAFDLGAIYQK 255
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 128 FLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ- 181
+ K A +G + G +Y+E D K++ Y +A G P + LG Y +
Sbjct: 307 YTKAAEKGDANSRFKLGDLYYEGKGVLQDYKQSEY-WYEKAVENGIPGDNYYLGRKYYEG 365
Query: 182 -------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
+A K L ++S G AQY L L + G GV+ +L++A W+ +A E G
Sbjct: 366 DKIVKDYSKAFKYLSKSSEQGWPFAQYYLGLMYYNGEGVEKDLKQAVYWFTKAGEQGNSD 425
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
+ Y GEG+ ++ A W +AA+ ++++ LG
Sbjct: 426 SQNKLGTIYGQGEGVEKDYKLAFNWYTKAAEHNE---KVQYNLGF 467
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 40/198 (20%)
Query: 92 NDALRPLR-----EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM 146
N L+PL EA L G+ +K+G GV+++++ A F+
Sbjct: 80 NKILKPLADKGDPEAQYNL--GEMYKYGIGVKQDIELANTYFM----------------- 120
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVR 198
A Y++AA GD Q +G+ YL+ +A + +A+ G++
Sbjct: 121 --------PAFEKYKKAAEKGDSEAQKKVGLMYLKGYGVSTDLTQAFQWYLKAAEQGNLE 172
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ + G GV+ + +A W+ +A E G A N Y GEG+ ++A +
Sbjct: 173 AQVNIGGAYRTGYGVNQDYNKALEWFTKATEQGNADAQRNLGSMYYKGEGVKKDTKKAFE 232
Query: 259 WMKRAADCGHGKAQLEHG 276
W+ +A + G A + G
Sbjct: 233 WLTKAVEQGDINAAFDLG 250
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEA-- 155
EA V + G ++ G GV ++ +KAL+ F K +G+ A + G MY++ + KK+
Sbjct: 172 EAQVNI--GGAYRTGYGVNQDYNKALEWFTKATEQGNADAQRNLGSMYYKGEGVKKDTKK 229
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCL 207
A +A GD F+LG Y + E + QY +
Sbjct: 230 AFEWLTKAVEQGDINAAFDLGAIYQKGCDGVSQDLEKCDFWLSKWAGSDLSCQYFIGGLY 289
Query: 208 HRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G + + + AA WY +AAE G + + Y G+G+ ++Q+ W ++A +
Sbjct: 290 EDGTEDLTQDYKRAAYWYTKAAEKGDANSRFKLGDLYYEGKGVLQDYKQSEYWYEKAVEN 349
Query: 267 G 267
G
Sbjct: 350 G 350
>gi|423239974|ref|ZP_17221089.1| hypothetical protein HMPREF1065_01712 [Bacteroides dorei
CL03T12C01]
gi|392644963|gb|EIY38697.1| hypothetical protein HMPREF1065_01712 [Bacteroides dorei
CL03T12C01]
Length = 317
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G GV +NL KA F A +G+ A + G +Y ++D ++A I YR++A
Sbjct: 117 YAYGHGVSENLSKAKKHFQYAAQQGNPQAQLGLGTLYRLGLGVQLDYRKA-IQWYRRSAS 175
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD NLG + E A+ +++ + AQY + + GRGV+ +L
Sbjct: 176 HGDSDAMNNLGYMFFNGLGVLPDVETALYWFGKSAAVDNPVAQYNIGVAYSLGRGVEKDL 235
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
A W ++A G A YN Y +G+G+ +A W K AA+ GH KA
Sbjct: 236 SVCASWLEKSALQGNAPAQYNLGRMYFWGKGVARDSVKAMLWYKEAAERGHVKA 289
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 72/181 (39%), Gaps = 12/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G + G G R + +KA F K G+ A + MY + A ++ A
Sbjct: 78 GDMYYRGLGGRVDYEKAFALFEKSGEAGNMNACNNLAFMYAYGHGVSENLSKAKKHFQYA 137
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G+P Q LG Y V+L Y+ +I G A L G GV
Sbjct: 138 AQQGNPQAQLGLGTLYRLGLGVQLDYRKAIQWYRRSASHGDSDAMNNLGYMFFNGLGVLP 197
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+++ A W+ ++A A YN + YS G G+ W++++A G+ AQ
Sbjct: 198 DVETALYWFGKSAAVDNPVAQYNIGVAYSLGRGVEKDLSVCASWLEKSALQGNAPAQYNL 257
Query: 276 G 276
G
Sbjct: 258 G 258
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVR 198
Y E D EA A + Q+ LG Y + E+A L ++ AG++
Sbjct: 49 YREHDYDEARNRFIPLAGIDSASYAQYLLGDMYYRGLGGRVDYEKAFALFEKSGEAGNMN 108
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
A LA G GV NL +A + + AA+ G +A Y G G+ L +R+A +
Sbjct: 109 ACNNLAFMYAYGHGVSENLSKAKKHFQYAAQQGNPQAQLGLGTLYRLGLGVQLDYRKAIQ 168
Query: 259 WMKRAADCGHGKAQLEHGLG-LFTEG 283
W +R+A HG + + LG +F G
Sbjct: 169 WYRRSAS--HGDSDAMNNLGYMFFNG 192
>gi|338708084|ref|YP_004662285.1| Sel1 domain-containing protein [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336294888|gb|AEI37995.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
Length = 593
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLG 167
G+ + K+ KA F K A +G A MY DKK+A LY++AA
Sbjct: 424 EGKSIPKDSAKAFQLFQKAADQGYAEAQYHLATMYRTGKDLPQDKKKA-FELYQKAAAQD 482
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
Q+NLG+ YL+ +AV +A+ G AQ+ LA +G G+ + +
Sbjct: 483 YATAQYNLGVMYLEGKDIPKDTAKAVLFFQKAAEQGDPEAQFNLANMYVKGEGIPQDKTK 542
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
A + + +AAE G RA Y L Y G G+P +A + ++AAD G
Sbjct: 543 AFQLFQKAAEQGLARAQYILGLMYRDGIGIPQDKTKAFQLFQKAADQG 590
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAA 164
K ++ G G+ K+ KA F K A +G A MY + K A LY++AA
Sbjct: 276 KIYRGGDGILKDSAKAFQLFQKAADQGYAEAQYHLATMYLTGEGIPQDKTKAFELYQKAA 335
Query: 165 VLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
Q+NLG+ YL+ +AV +A+ G AQ+ LA +G G+ +
Sbjct: 336 AQDYATAQYNLGVMYLEGKDIPKDTAKAVLFFQKAAEQGDPEAQFNLANMYVKGEGILQD 395
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+A + + +AA+ G A N ++ Y G+ +P +A + ++AAD G+ +AQ
Sbjct: 396 KTKAFQLFQKAADQGNSAAQNNLAVMYLEGKSIPKDSAKAFQLFQKAADQGYAEAQ 451
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDP 169
G G+ ++ KA F K A +G++ A + +MY E + K A A L+++AA G
Sbjct: 389 GEGILQDKTKAFQLFQKAADQGNSAAQNNLAVMYLEGKSIPKDSAKAFQLFQKAADQGYA 448
Query: 170 AGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
Q++L Y +++A +L +A+ + AQY L + G+ + + +A
Sbjct: 449 EAQYHLATMYRTGKDLPQDKKKAFELYQKAAAQDYATAQYNLGVMYLEGKDIPKDTAKAV 508
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++ +AAE G A +N + Y GEG+P +A + ++AA+ G +AQ GL
Sbjct: 509 LFFQKAAEQGDPEAQFNLANMYVKGEGIPQDKTKAFQLFQKAAEQGLARAQYILGL 564
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 22/222 (9%)
Query: 78 LPQ--LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
LPQ +A L K+ N L + + G + G V KN KA++ K A G
Sbjct: 104 LPQDKKKAFELYLKAANQGLSAAQ-----YKIGTMYYEGSAVPKNNRKAIEWIRKAADNG 158
Query: 136 STLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------E 182
A G++Y+ DK +AA Y++A + GD ++ L I+Y
Sbjct: 159 LGQAEYALGVLYYTGEILPQDKNKAAY-FYKKAEIQGDDTTEYALAITYYSGIKAPQDIT 217
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+A +L +++ G+ AQ LA+ G G+ N +A + + +AA+ A N +
Sbjct: 218 KAFQLFQKSANQGNAEAQNGLAVLYWTGEGISQNKAQALQLFQKAADQDNAEAQNNLAKI 277
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
Y G+G+ +A + ++AAD G+ +AQ H ++ GE
Sbjct: 278 YRGGDGILKDSAKAFQLFQKAADQGYAEAQY-HLATMYLTGE 318
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQFN 174
+++ KA F K A +G+ A ++YW + K A+ L+++AA + Q N
Sbjct: 214 QDITKAFQLFQKSANQGNAEAQNGLAVLYWTGEGISQNKAQALQLFQKAADQDNAEAQNN 273
Query: 175 L--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
L GI +A +L +A+ G+ AQY LA G G+ + +A Y +
Sbjct: 274 LAKIYRGGDGILKDSAKAFQLFQKAADQGYAEAQYHLATMYLTGEGIPQDKTKAFELYQK 333
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM 286
AA Y A YN + Y G+ +P +A + ++AA+ G +AQ ++ +GE +
Sbjct: 334 AAAQDYATAQYNLGVMYLEGKDIPKDTAKAVLFFQKAAEQGDPEAQFNLA-NMYVKGEGI 392
Query: 287 -----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
KA + A G +AA + V+ + + +D A
Sbjct: 393 LQDKTKAFQLFQKAADQGNSAAQNNLAVMYLEGKSIPKDSA 433
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
+L++A+ G+ AQ+ LA G+ + N++EA +WY +AA+ Y +A YN + Y +G
Sbjct: 42 VLFKAAQRGNAEAQFLLAKKYSLGKEIPKNMKEAFQWYQKAADQNYQKAQYNLASMYEYG 101
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGET 301
E LP ++A + +AA+ G AQ + G ++ EG + KA+ ++ A G
Sbjct: 102 EYLPQDKKKAFELYLKAANQGLSAAQYKIGT-MYYEGSAVPKNNRKAIEWIRKAADNGLG 160
Query: 302 AADHVKNVI 310
A++ V+
Sbjct: 161 QAEYALGVL 169
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+++G + ++ KA + +LK A +G + A G MY+E AI R+AA
Sbjct: 98 YEYGEYLPQDKKKAFELYLKAANQGLSAAQYKIGTMYYEGSAVPKNNRKAIEWIRKAADN 157
Query: 167 GDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G ++ LG+ Y E A +A I G +Y LA+ + G ++
Sbjct: 158 GLGQAEYALGVLYYTGEILPQDKNKAAYFYKKAEIQGDDTTEYALAITYYSGIKAPQDIT 217
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+A + + ++A G A ++ Y GEG+ + QA + ++AAD + +AQ
Sbjct: 218 KAFQLFQKSANQGNAEAQNGLAVLYWTGEGISQNKAQALQLFQKAADQDNAEAQ 271
>gi|427404689|ref|ZP_18895429.1| hypothetical protein HMPREF9710_05025 [Massilia timonae CCUG 45783]
gi|425716860|gb|EKU79829.1| hypothetical protein HMPREF9710_05025 [Massilia timonae CCUG 45783]
Length = 474
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 96/247 (38%), Gaps = 53/247 (21%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ HG GV + A+ F K A +G A V MY A+ +R AA
Sbjct: 143 YLHGLGVNVSHPLAMAWFRKAAMQGHVPAQVQLAQMYARGQGVAPSPAQALYWFRHAAGA 202
Query: 167 GDPAGQFNLGISYLQ-------------------------------------------EE 183
GDP Q LG++Y +
Sbjct: 203 GDPTAQRQLGVAYAEGRGAGPDPALAIQWLERAAAGGEREALYVLGGLLSGGGMPRDSAR 262
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
A++ QA+ GHV+AQY++A L G GV + A +YL+AAEGG A + L Y
Sbjct: 263 ALRCYMQAAARGHVQAQYRVARMLAGGCGVQRDPARALEFYLQAAEGGAANAQFALGLLY 322
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRA 298
+ G+G+P A W +RAA G AQ G ++ GE + A + LA R
Sbjct: 323 AKGQGVPRDLALAAAWYRRAAQQGDASAQNNLG-AMYACGEGVPRDDNLAAHWYRLAARQ 381
Query: 299 GETAADH 305
A H
Sbjct: 382 DHPPAQH 388
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGR 211
+ +AA G+P QFNL YL+ + V L +A+ G AQ L + GR
Sbjct: 16 FHRAASGGNPYAQFNLAQLYLRGDGVARDEAKAAAWLARAAQQGLAFAQNHLGAMYYNGR 75
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV + AA W+ RAAE G A +N L Y G G+P SH+ A W RAA+ G +A
Sbjct: 76 GVCRDHTRAAHWFQRAAEQGDRSAQHNLGLLYRKGRGVPRSHKAAIGWFYRAAEQGMARA 135
Query: 272 QLE------HGLGL 279
Q + HGLG+
Sbjct: 136 QTQLAQGYLHGLGV 149
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +GRGV ++ +A F + A +G A + GL+Y + +AAI + +A
Sbjct: 68 GAMYYNGRGVCRDHTRAAHWFQRAAEQGDRSAQHNLGLLYRKGRGVPRSHKAAIGWFYRA 127
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q L YL V + + +A++ GHV AQ QLA RG+GV
Sbjct: 128 AEQGMARAQTQLAQGYLHGLGVNVSHPLAMAWFRKAAMQGHVPAQVQLAQMYARGQGVAP 187
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +A W+ AA G A + Y+ G G A +W++RAA G
Sbjct: 188 SPAQALYWFRHAAGAGDPTAQRQLGVAYAEGRGAGPDPALAIQWLERAAAGG 239
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ A +A+ G AQ+ L L +GRGV + + A W+ RAAE G RA
Sbjct: 76 GVCRDHTRAAHWFQRAAEQGDRSAQHNLGLLYRKGRGVPRSHKAAIGWFYRAAEQGMARA 135
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVY 291
+ Y G G+ +SH A W ++AA GH AQ++ + G +A+ +
Sbjct: 136 QTQLAQGYLHGLGVNVSHPLAMAWFRKAAMQGHVPAQVQLAQMYARGQGVAPSPAQALYW 195
Query: 292 LELATRAGETAADHVKNVILQQLSATSRDRAMLV 325
A AG+ A V + D A+ +
Sbjct: 196 FRHAAGAGDPTAQRQLGVAYAEGRGAGPDPALAI 229
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 62/150 (41%), Gaps = 32/150 (21%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQAAVLGDP 169
G GV+++ +AL+ +L+ A G+ A GL+Y + ++L YR+AA GD
Sbjct: 289 GCGVQRDPARALEFYLQAAEGGAANAQFALGLLYAKGQGVPRDLALAAAWYRRAAQQGDA 348
Query: 170 AGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
+ Q NLG Y E V D NL AA WY AA
Sbjct: 349 SAQNNLGAMYACGEGVPR--------------------------DDNL--AAHWYRLAAR 380
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
+ A +N Y+ G G+ + +A W
Sbjct: 381 QDHPPAQHNLGGLYAAGRGVAKNPVRACMW 410
>gi|375336543|ref|ZP_09777887.1| hypothetical protein SbacW_06078 [Succinivibrionaceae bacterium
WG-1]
Length = 409
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 12/190 (6%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K + + L L + + + G +++G GV K++ A++ + + +M ++Y
Sbjct: 145 AKDYLEELAMLGKPLAMYNLGCMYQNGNGVEKDMSIAINYWEQAVQYDEPNSMFSLAILY 204
Query: 148 WE-MDKK---EAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAG 195
E ++ K + A LY +AA LG NLG Y E +A KL QA+ G
Sbjct: 205 AEGVEVKKDLQKAKELYEKAAKLGHLKAMNNLGYMYECEAKNDQDYQKAFKLYEQAATQG 264
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+A +A G + + +A WY +AA +AMYN Y+ G+G+ + +
Sbjct: 265 DPKAMLSMAYFYSEGISLKQDFLKAKEWYEKAASLNESKAMYNLGFLYTEGKGVEKDYLK 324
Query: 256 ARKWMKRAAD 265
AR+W ++AAD
Sbjct: 325 AREWFEKAAD 334
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 168 DPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
D F LG S+ E V+ YQ ++ G++ A Y L + G G N E
Sbjct: 12 DSIEMFKLGYSFFAGEGVQQDYQKAKELFEKSANLGNLDAIYNLGVLHANGIGGQQNYSE 71
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK-WMKRAADCGHGKAQLEHGL- 277
A + + +AA G+ AM+ + Y G+G+P +++A++ + K + A L L
Sbjct: 72 AVKCFEKAALLGHKAAMFYLATLYEQGQGVPQDYKKAKELYEKLVVEYKDYDAMLNLALI 131
Query: 278 ---GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 330
GL + + +KA YLE G+ A + + Q + +D + + ++ W
Sbjct: 132 YLNGLTRKYDYVKAKDYLEELAMLGKPLAMYNLGCMYQNGNGVEKDMS-IAINYWE 186
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 94/235 (40%), Gaps = 51/235 (21%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKE 154
++++ + + G F G GV+++ KA + F K A G+ A+ + G+++
Sbjct: 11 KDSIEMFKLGYSFFAGEGVQQDYQKAKELFEKSANLGNLDAIYNLGVLHANGIGGQQNYS 70
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAV-------KLLYQASIA------------- 194
A+ + +AA+LG A F L Y Q + V K LY+ +
Sbjct: 71 EAVKCFEKAALLGHKAAMFYLATLYEQGQGVPQDYKKAKELYEKLVVEYKDYDAMLNLAL 130
Query: 195 -------------------------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
G A Y L G GV+ ++ A ++ +A +
Sbjct: 131 IYLNGLTRKYDYVKAKDYLEELAMLGKPLAMYNLGCMYQNGNGVEKDMSIAINYWEQAVQ 190
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+M++ ++ Y+ G + ++A++ ++AA GH KA + LG E E
Sbjct: 191 YDEPNSMFSLAILYAEGVEVKKDLQKAKELYEKAAKLGHLKAM--NNLGYMYECE 243
>gi|421165219|ref|ZP_15623559.1| hypothetical protein PABE177_0383 [Pseudomonas aeruginosa ATCC
700888]
gi|404542610|gb|EKA51924.1| hypothetical protein PABE177_0383 [Pseudomonas aeruginosa ATCC
700888]
Length = 328
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALC 206
D+ A + RQAA G+P F+ G + Q++ A + +A+ AG VRAQ QLA+
Sbjct: 43 DELFAEFTRLRQAAETGEPQALFDFGAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAML 102
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G G + EAARW+ +AAE G A + Y GEG+ +A W +RAA
Sbjct: 103 YRDGDGGPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAAS 162
Query: 267 GHGKAQLEHGLGLF 280
G A E LG F
Sbjct: 163 GSEDA--ETNLGWF 174
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G ++ +A F K A +G A + G++YW + D+ +A + + +AA
Sbjct: 103 YRDGDGGPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAG-TWFERAAA 161
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G + NLG YL + + +Y A+ + A L R G + ++A +W+
Sbjct: 162 SGSEDAETNLGWFYLDDS--QGVYSATSD-------EEAALLDRYAG---SREKAFQWFC 209
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+AA G RA + Y G G ++ QAR W+++AA
Sbjct: 210 KAATQGDTRAQFKVGEAYWNGSGAGMNKLQARLWLEKAA 248
>gi|418054797|ref|ZP_12692853.1| Sel1 domain protein repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
gi|353212422|gb|EHB77822.1| Sel1 domain protein repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
Length = 879
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R AA GD + +F +G + +EA K +A+ G V+AQY+L RG G
Sbjct: 670 RLAAANGDASAEFEVGARLAEGKGTPQNFKEAAKWYQRAADHGLVQAQYRLGTFYERGLG 729
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ + A WY RAA+ G V+AM+N ++ + + A +W ++AA G +Q
Sbjct: 730 MKADRALAETWYKRAADKGNVKAMHNLAVLSANQTDQSPDYTTAAQWFEQAAQRGLADSQ 789
Query: 273 L------EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 326
E+GLG+ + ++ +A +++ LA R + A + ++ +L+A A ++
Sbjct: 790 FNLAILYENGLGV--KKDLQQAYMWISLAARDKDADAVRRQGILRGKLTAEDLAEAERMI 847
Query: 327 DSWRAMP 333
WR +P
Sbjct: 848 SEWRPIP 854
>gi|260567915|ref|ZP_05838384.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
40]
gi|261753776|ref|ZP_05997485.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
686]
gi|376276522|ref|YP_005152583.1| peptidoglycan-binding domain-containing protein [Brucella canis HSK
A52141]
gi|260154580|gb|EEW89661.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
40]
gi|261743529|gb|EEY31455.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
686]
gi|363404896|gb|AEW15190.1| peptidoglycan-binding domain 1 protein [Brucella canis HSK A52141]
Length = 942
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 175 LGISYLQEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+ I + EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G
Sbjct: 691 IEIPSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNA 750
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAV 289
AM+N ++ ++ G + A +W AA+ G +Q G+ GL + ++
Sbjct: 751 SAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESY 810
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 333
+ LA AG+ A ++ I + L RA V+ W+A P
Sbjct: 811 KWFALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 854
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G+ A + LA
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLA 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G + A RW+ AAE G + YN + + G G+P++ ++ KW AA
Sbjct: 758 VLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAA 817
Query: 265 DCGHGKA 271
+ G A
Sbjct: 818 NAGDKDA 824
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 38/144 (26%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-- 149
LREA L G R+ GRGV +N+ +A + A +G+ AM + +++
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLAVLFATGT 764
Query: 150 --MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCL 207
AA+ + +AA LG Q+NLGI
Sbjct: 765 NGTPDNAAAVRWFTEAAELGVKDSQYNLGI----------------------------LA 796
Query: 208 HRGRGVDFNLQEAARWYLRAAEGG 231
+G G+ NL+E+ +W+ AA G
Sbjct: 797 AKGLGMPVNLEESYKWFALAANAG 820
>gi|225629289|ref|ZP_03787322.1| peptidoglycan-binding protein [Brucella ceti str. Cudo]
gi|261220645|ref|ZP_05934926.1| peptidoglycan binding domain-containing protein [Brucella ceti
B1/94]
gi|261318512|ref|ZP_05957709.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
B2/94]
gi|261757018|ref|ZP_06000727.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
gi|265986312|ref|ZP_06098869.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
M292/94/1]
gi|265996006|ref|ZP_06108563.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
gi|340792600|ref|YP_004758064.1| putative peptidoglycan-binding protein [Brucella pinnipedialis
B2/94]
gi|225615785|gb|EEH12834.1| peptidoglycan-binding protein [Brucella ceti str. Cudo]
gi|260919229|gb|EEX85882.1| peptidoglycan binding domain-containing protein [Brucella ceti
B1/94]
gi|261297735|gb|EEY01232.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
B2/94]
gi|261737002|gb|EEY24998.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
gi|262550303|gb|EEZ06464.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
gi|264658509|gb|EEZ28770.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
M292/94/1]
gi|340561059|gb|AEK56296.1| putative peptidoglycan-binding protein [Brucella pinnipedialis
B2/94]
Length = 978
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIG 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 758 SFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 817
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 818 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 877
Query: 321 RAMLVVDSWRAMP 333
RA V+ W+A P
Sbjct: 878 RAKGAVELWKAKP 890
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N +K AA+ LA D G
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAEN--------VKEAAKWYQLA-ADQGF------ 749
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 750 ----APAQYR--------IGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFA 797
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 798 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 857
Query: 269 GKA 271
A
Sbjct: 858 KDA 860
>gi|254243458|ref|ZP_04936780.1| hypothetical protein PA2G_04274 [Pseudomonas aeruginosa 2192]
gi|420136933|ref|ZP_14644941.1| hypothetical protein PACIG1_0442 [Pseudomonas aeruginosa CIG1]
gi|421157361|ref|ZP_15616741.1| hypothetical protein PABE173_0371 [Pseudomonas aeruginosa ATCC
25324]
gi|424943224|ref|ZP_18358987.1| hypothetical protein NCGM1179_4413 [Pseudomonas aeruginosa
NCMG1179]
gi|126196836|gb|EAZ60899.1| hypothetical protein PA2G_04274 [Pseudomonas aeruginosa 2192]
gi|346059670|dbj|GAA19553.1| hypothetical protein NCGM1179_4413 [Pseudomonas aeruginosa
NCMG1179]
gi|403250326|gb|EJY63774.1| hypothetical protein PACIG1_0442 [Pseudomonas aeruginosa CIG1]
gi|404550683|gb|EKA59409.1| hypothetical protein PABE173_0371 [Pseudomonas aeruginosa ATCC
25324]
Length = 328
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
RQAA G+P F+ G + Q++ A + +A+ AG VRAQ QLA+ G G +
Sbjct: 53 RQAAETGEPQALFDFGAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQD 112
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
EAARW+ +AAE G A + Y GEG+ +A W +RAA G A E
Sbjct: 113 KTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAASGSEDA--ETN 170
Query: 277 LGLF 280
LG F
Sbjct: 171 LGWF 174
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G ++ +A F K A +G A + G++YW + D+ +A + + +AA
Sbjct: 103 YRDGDGGPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAG-TWFERAAA 161
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G + NLG YL + + +Y A+ + A L R G + ++A +W+
Sbjct: 162 SGSEDAETNLGWFYLDDS--QGVYSAT-------SDEEAALLDRYAG---SREKAFQWFC 209
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+AA G RA + Y G G ++ QAR W+++AA
Sbjct: 210 KAATQGDARAQFKVGEAYWNGSGAGMNKLQARLWLEKAA 248
>gi|422024059|ref|ZP_16370560.1| hypothetical protein OO7_16163 [Providencia sneebia DSM 19967]
gi|414091459|gb|EKT53144.1| hypothetical protein OO7_16163 [Providencia sneebia DSM 19967]
Length = 494
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE------MDKKEAAISLYRQAAVLGDPA 170
++ NL + LK A G AM+D GL Y E +D K+A + +++A+ L +
Sbjct: 42 LQNNLPVEFQNRLKLAQAGDVAAMIDIGLAYAEGTDFLSVDDKQA-YTWFKKASDLNNTD 100
Query: 171 GQFNLGI------SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224
G + LG+ +Y EEA + + + +G QY L G GV+ N ++A WY
Sbjct: 101 GDYYLGVLAQHQDNY--EEAARWYRKGAESGDAYCQYALGYLYENGLGVEQNYKQAKAWY 158
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +AE G + + Y G G + +++AR W +++A+ G
Sbjct: 159 VESAEQGQASGQFALGMFYHDGIGGDVDYQKARMWYEKSAELG 201
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------G 195
G++ D E A YR+ A GD Q+ LG Y V+ Y+ + A G
Sbjct: 106 GVLAQHQDNYEEAARWYRKGAESGDAYCQYALGYLYENGLGVEQNYKQAKAWYVESAEQG 165
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
Q+ L + H G G D + Q+A WY ++AE G ++ N ++ Y G+G+ ++
Sbjct: 166 QASGQFALGMFYHDGIGGDVDYQKARMWYEKSAELGVAASLNNLAVMYEKGQGVREDGQK 225
Query: 256 ARKWMKRAADCGHGKAQLEHG 276
A +AA+ G AQ G
Sbjct: 226 AADLYHQAANMGSSTAQANMG 246
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G +++G GV +N +A +++ A +G G+ Y ++D ++A + Y +
Sbjct: 138 GYLYENGLGVEQNYKQAKAWYVESAEQGQASGQFALGMFYHDGIGGDVDYQKARM-WYEK 196
Query: 163 AAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRG-RGV 213
+A LG A NL + Y + + V+ L +QA+ G AQ + H G +
Sbjct: 197 SAELGVAASLNNLAVMYEKGQGVREDGQKAADLYHQAANMGSSTAQANMGKFYHNGTEFL 256
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ N ++ WY RAA A Y + Y G+G+ A +W ++A G A +
Sbjct: 257 EQNDYQSIYWYKRAALQENEEAQYALAQGYETGKGIGQDVNMAFEWYQKAGSNGSAAAGM 316
Query: 274 ------EHGLGLFTEGEMMKAVVYLELA 295
E G+G + YL +A
Sbjct: 317 KVAEYYEKGIGDIPPNQQKAIDWYLSMA 344
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + KA + K A G ++ + +MY + + + A LY QA
Sbjct: 174 GMFYHDGIGGDVDYQKARMWYEKSAELGVAASLNNLAVMYEKGQGVREDGQKAADLYHQA 233
Query: 164 AVLGDPAGQFNLG------ISYLQEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVD 214
A +G Q N+G +L++ + +Y +A++ + AQY LA G+G+
Sbjct: 234 ANMGSSTAQANMGKFYHNGTEFLEQNDYQSIYWYKRAALQENEEAQYALAQGYETGKGIG 293
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAADCGHGKAQL 273
++ A WY +A G A + Y G G +P + ++A W A+ +AQ+
Sbjct: 294 QDVNMAFEWYQKAGSNGSAAAGMKVAEYYEKGIGDIPPNQQKAIDWYLSMAEANVREAQV 353
>gi|344924372|ref|ZP_08777833.1| hypothetical protein COdytL_06977 [Candidatus Odyssella
thessalonicensis L13]
Length = 492
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 12/141 (8%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAG 195
G +YW+ E AI Y ++A G A Q+ LG +Y + +EAV+ Y++++ G
Sbjct: 66 GNVYWQGHSYEKAIKYYFKSAKHGHAAAQYALGYAYWRGIGIEQNYKEAVQWCYKSALQG 125
Query: 196 HVRAQYQL--ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
+ +AQ L A C+ G GV+ + +E+ +WY +AA A ++ CY G+G+ +
Sbjct: 126 YAKAQNFLGDAYCI--GAGVEKSYEESVKWYQQAALQNNAAAQHSLGYCYQEGQGIEQNF 183
Query: 254 RQARKWMKRAADCGHGKAQLE 274
+A +W KRAA G AQ E
Sbjct: 184 EKAMEWYKRAATQGCPIAQFE 204
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLG 176
+KA+ + K A G A G YW E + KEA Y+ +A+ G Q LG
Sbjct: 76 EKAIKYYFKSAKHGHAAAQYALGYAYWRGIGIEQNYKEAVQWCYK-SALQGYAKAQNFLG 134
Query: 177 ISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+Y EE+VK QA++ + AQ+ L C G+G++ N ++A WY RAA
Sbjct: 135 DAYCIGAGVEKSYEESVKWYQQAALQNNAAAQHSLGYCYQEGQGIEQNFEKAMEWYKRAA 194
Query: 229 EGGYVRAMYNTSLCYSF-GEGLPLSHRQARKWM 260
G A + YS EG QA W+
Sbjct: 195 TQGCPIAQFELVKAYSIPPEGSNQDPMQAFNWL 227
>gi|15595557|ref|NP_249051.1| hypothetical protein PA0360 [Pseudomonas aeruginosa PAO1]
gi|107099344|ref|ZP_01363262.1| hypothetical protein PaerPA_01000356 [Pseudomonas aeruginosa PACS2]
gi|386056427|ref|YP_005972949.1| hypothetical protein PAM18_0358 [Pseudomonas aeruginosa M18]
gi|418584408|ref|ZP_13148470.1| hypothetical protein O1O_07081 [Pseudomonas aeruginosa MPAO1/P1]
gi|418593971|ref|ZP_13157793.1| hypothetical protein O1Q_24871 [Pseudomonas aeruginosa MPAO1/P2]
gi|421514974|ref|ZP_15961660.1| hypothetical protein A161_01840 [Pseudomonas aeruginosa PAO579]
gi|451984103|ref|ZP_21932361.1| hypothetical protein PA18A_1469 [Pseudomonas aeruginosa 18A]
gi|9946211|gb|AAG03749.1|AE004474_1 hypothetical protein PA0360 [Pseudomonas aeruginosa PAO1]
gi|347302733|gb|AEO72847.1| hypothetical protein PAM18_0358 [Pseudomonas aeruginosa M18]
gi|375045617|gb|EHS38194.1| hypothetical protein O1Q_24871 [Pseudomonas aeruginosa MPAO1/P2]
gi|375045906|gb|EHS38479.1| hypothetical protein O1O_07081 [Pseudomonas aeruginosa MPAO1/P1]
gi|404348702|gb|EJZ75039.1| hypothetical protein A161_01840 [Pseudomonas aeruginosa PAO579]
gi|451758248|emb|CCQ84884.1| hypothetical protein PA18A_1469 [Pseudomonas aeruginosa 18A]
Length = 328
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
RQAA G+P F+ G + Q++ A + +A+ AG VRAQ QLA+ G G +
Sbjct: 53 RQAAETGEPQALFDFGAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQD 112
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
EAARW+ +AAE G A + Y GEG+ +A W +RAA G A E
Sbjct: 113 KTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAASGSEDA--ETN 170
Query: 277 LGLF 280
LG F
Sbjct: 171 LGWF 174
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G ++ +A F K A +G A + G++YW + D+ +A + + +AA
Sbjct: 103 YRDGDGGPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAG-TWFERAAA 161
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G + NLG YL + + +Y A+ + A L R G + ++A +W+
Sbjct: 162 SGSEDAETNLGWFYLDDS--QGVYSAT-------SDEEAALLDRYAG---SREKAFQWFC 209
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+AA G RA + Y G G ++ QAR W+++AA
Sbjct: 210 KAATQGDARAQFKVGEAYWNGSGAGMNKLQARLWLEKAA 248
>gi|306837317|ref|ZP_07470199.1| Peptidoglycan-binding domain 1 protein [Brucella sp. NF 2653]
gi|306407594|gb|EFM63791.1| Peptidoglycan-binding domain 1 protein [Brucella sp. NF 2653]
Length = 979
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 699 EEAGPAALREAAAKGDMRALFEIGNRYMEGRGVAANVKEAAKWYQLAADHGFAPAQYRIG 758
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 759 SFNEKGLGMARNLEKAKNWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 818
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 819 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 878
Query: 321 RAMLVVDSWRAMP 333
RA V+ W+A P
Sbjct: 879 RAKGAVELWKAKP 891
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 75/183 (40%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV N +K AA+ LA D G
Sbjct: 706 LREAAAKGDMRALFEIGNRYMEGRGVAAN--------VKEAAKWYQLA-ADHGF------ 750
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 751 ----APAQYR--------IGSFNEKGLGMARNLEKAKNWYQLAADQGNASAMHNLAVLFA 798
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 799 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 858
Query: 269 GKA 271
A
Sbjct: 859 KDA 861
>gi|256015586|ref|YP_003105595.1| putative peptidoglycan-binding protein [Brucella microti CCM 4915]
gi|255998246|gb|ACU49933.1| putative peptidoglycan-binding protein [Brucella microti CCM 4915]
Length = 978
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIG 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 758 SFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 817
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 818 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 877
Query: 321 RAMLVVDSWRAMP 333
RA V+ W+A P
Sbjct: 878 RAKGAVELWKAKP 890
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N +K AA+ LA D G
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAEN--------VKEAAKWYQLA-ADQGF------ 749
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 750 ----APAQYR--------IGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFA 797
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 798 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 857
Query: 269 GKA 271
A
Sbjct: 858 KDA 860
>gi|261322945|ref|ZP_05962142.1| peptidoglycan binding domain-containing protein [Brucella neotomae
5K33]
gi|261298925|gb|EEY02422.1| peptidoglycan binding domain-containing protein [Brucella neotomae
5K33]
Length = 959
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIG 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 758 SFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 817
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 818 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 877
Query: 321 RAMLVVDSWRAMP 333
RA V+ W+A P
Sbjct: 878 RAKGAVELWKAKP 890
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N +K AA+ LA D G
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAEN--------VKEAAKWYQLA-ADQGF------ 749
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 750 ----APAQYR--------IGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFA 797
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 798 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 857
Query: 269 GKA 271
A
Sbjct: 858 KDA 860
>gi|23500552|ref|NP_699992.1| peptidoglycan-binding protein [Brucella suis 1330]
gi|376278773|ref|YP_005108806.1| peptidoglycan-binding protein, putative [Brucella suis VBI22]
gi|384223334|ref|YP_005614499.1| peptidoglycan-binding protein [Brucella suis 1330]
gi|23464187|gb|AAN33997.1| peptidoglycan-binding protein, putative [Brucella suis 1330]
gi|343384782|gb|AEM20273.1| peptidoglycan-binding protein, putative [Brucella suis 1330]
gi|358260211|gb|AEU07944.1| peptidoglycan-binding protein, putative [Brucella suis VBI22]
Length = 913
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 175 LGISYLQEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+ I + EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G
Sbjct: 662 IEIPSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNA 721
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAV 289
AM+N ++ ++ G + A +W AA+ G +Q G+ GL + ++
Sbjct: 722 SAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESY 781
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 333
+ LA AG+ A ++ I + L RA V+ W+A P
Sbjct: 782 KWFALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 825
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G+ A + LA
Sbjct: 669 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLA 728
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G + A RW+ AAE G + YN + + G G+P++ ++ KW AA
Sbjct: 729 VLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAA 788
Query: 265 DCGHGKA 271
+ G A
Sbjct: 789 NAGDKDA 795
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 32/132 (24%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISL 159
L G R+ GRGV +N+ +A + A +G+ AM + +++ AA+
Sbjct: 688 LFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRW 747
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+ +AA LG Q+NLGI +G G+ NL+E
Sbjct: 748 FTEAAELGVKDSQYNLGI----------------------------LAAKGLGMPVNLEE 779
Query: 220 AARWYLRAAEGG 231
+ +W+ AA G
Sbjct: 780 SYKWFALAANAG 791
>gi|218889101|ref|YP_002437965.1| hypothetical protein PLES_03571 [Pseudomonas aeruginosa LESB58]
gi|421151426|ref|ZP_15611040.1| hypothetical protein PABE171_0382 [Pseudomonas aeruginosa ATCC
14886]
gi|218769324|emb|CAW25084.1| hypothetical protein PLES_03571 [Pseudomonas aeruginosa LESB58]
gi|404527330|gb|EKA37494.1| hypothetical protein PABE171_0382 [Pseudomonas aeruginosa ATCC
14886]
Length = 328
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
RQAA G+P F+ G + Q++ A + +A+ AG VRAQ QLA+ G G +
Sbjct: 53 RQAAETGEPQALFDFGAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQD 112
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
EAARW+ +AAE G A + Y GEG+ +A W +RAA G A E
Sbjct: 113 KTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAASGSEDA--ETN 170
Query: 277 LGLF 280
LG F
Sbjct: 171 LGWF 174
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G ++ +A F K A +G A + G++YW + D+ +A + + +AA
Sbjct: 103 YRDGDGGPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAG-TWFERAAA 161
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G + NLG YL + + +Y A+ + A L R G + ++A W+
Sbjct: 162 SGSEDAETNLGWFYLDDS--QGVYSAT-------SDEEAALLDRYAG---SREKAFHWFC 209
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+AA G RA + Y G G ++ QAR W+++AA
Sbjct: 210 KAATQGDARAQFKVGEAYWNGSGAGMNKLQARLWLEKAA 248
>gi|265985084|ref|ZP_06097819.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
gi|264663676|gb|EEZ33937.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
Length = 979
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 699 EEAGPAALREAAAKGDMRALFEIGNRYMEGRGVAANVKEAAKWYQLAADHGFAPAQYRIG 758
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 759 SFNEKGLGMARNLEKAKNWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 818
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 819 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 878
Query: 321 RAMLVVDSWRAMP 333
RA V+ W+A P
Sbjct: 879 RAKGAVELWKAKP 891
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 75/183 (40%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV N +K AA+ LA D G
Sbjct: 706 LREAAAKGDMRALFEIGNRYMEGRGVAAN--------VKEAAKWYQLA-ADHGF------ 750
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 751 ----APAQYR--------IGSFNEKGLGMARNLEKAKNWYQLAADQGNASAMHNLAVLFA 798
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 799 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 858
Query: 269 GKA 271
A
Sbjct: 859 KDA 861
>gi|445493773|ref|ZP_21460817.1| TPR repeat-containing protein [Janthinobacterium sp. HH01]
gi|444789934|gb|ELX11481.1| TPR repeat-containing protein [Janthinobacterium sp. HH01]
Length = 544
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
Q EA ++A+ AGHV+AQ + G+GV + +A WYL+AAE G +A N
Sbjct: 196 QIEAAIWYHKAAEAGHVQAQVETGYRYEHGKGVAQDYAQAMEWYLKAAEQGDHQAENNIG 255
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
L +++G G+PL A +W ++AA+ GH Q LG+F
Sbjct: 256 LLHAYGRGVPLDRAVAAEWYRKAAEGGHAWGQAN--LGMF 293
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 39/225 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R++HG+GV ++ +A++ +LK A +G A + GL++ +D+ AA YR+
Sbjct: 219 GYRYEHGKGVAQDYAQAMEWYLKAAEQGDHQAENNIGLLHAYGRGVPLDRAVAA-EWYRK 277
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
AA G GQ NLG+ YL GRGV+ +L A +
Sbjct: 278 AAEGGHAWGQANLGMFYL----------------------------YGRGVEKDLPLAQQ 309
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 278
W RAA A + S Y GEG+ S + +++RAA G +Q+ GL G
Sbjct: 310 WLERAAAQRNPAAERDLSAMYLRGEGVFHSDEEGALYLRRAAQDGDIASQIRWGLVLTYG 369
Query: 279 LFTE-GEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
L E + ++ + + A + G AA + + + ++D A
Sbjct: 370 LLGEKADPVQGLAFQRTAAKTGNAAAQNNIGYAFEIGNGVAQDYA 414
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 35/162 (21%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G F+ G GV ++ A D + + A+G+ A G M+ E K A A SLY+
Sbjct: 400 GYAFEIGNGVAQDYAAARDWYTRAVAQGNGNAQAALGYMH-EQGKGMAKDLSKAASLYQA 458
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
+A +P G Y+LA GR V + +A
Sbjct: 459 SAAQNNPDGL----------------------------YRLATLTEAGRAVPQSASDALD 490
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRA 263
Y R+AE ++ AM + Y GE GL QA++W ++A
Sbjct: 491 LYRRSAELNFLSAMRRLATAYEKGELGLKPDAAQAQQWREKA 532
>gi|416859174|ref|ZP_11913713.1| hypothetical protein PA13_17704 [Pseudomonas aeruginosa 138244]
gi|421178270|ref|ZP_15635885.1| hypothetical protein PAE2_0331 [Pseudomonas aeruginosa E2]
gi|334838716|gb|EGM17425.1| hypothetical protein PA13_17704 [Pseudomonas aeruginosa 138244]
gi|404548600|gb|EKA57547.1| hypothetical protein PAE2_0331 [Pseudomonas aeruginosa E2]
gi|453045737|gb|EME93455.1| hypothetical protein H123_13055 [Pseudomonas aeruginosa PA21_ST175]
Length = 328
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
RQAA G+P F+ G + Q++ A + +A+ AG VRAQ QLA+ G G +
Sbjct: 53 RQAAETGEPQALFDFGAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQD 112
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
EAARW+ +AAE G A + Y GEG+ +A W +RAA G A E
Sbjct: 113 KTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAASGSEDA--ETN 170
Query: 277 LGLF 280
LG F
Sbjct: 171 LGWF 174
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G ++ +A F K A +G A + G++YW + D+ +A + + +AA
Sbjct: 103 YRDGDGGPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAG-TWFERAAA 161
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G + NLG YL + + +Y A+ + A L R G + ++A W+
Sbjct: 162 SGSEDAETNLGWFYLDDS--QGVYSAT-------SDEEAALLDRYAG---SREKAFHWFC 209
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+AA G RA + Y G G ++ QAR W+++AA
Sbjct: 210 KAATQGDARAQFKVGEAYWNGSGAGMNKLQARLWLEKAA 248
>gi|406880963|gb|EKD29153.1| hypothetical protein ACD_79C00038G0003 [uncultured bacterium]
Length = 420
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 18/233 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G+ + +G G +N +++L F K + +GS AM + G MY K AI ++++
Sbjct: 88 GRLYYNGEGTERNYEESLKWFEKASIQGSGWAMFELGRMYSIGQGTNKDKNKAIEWFKKS 147
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q LG+ Y++ V+ YQ ++I G+ A + + + G GV
Sbjct: 148 AEKGFDLAQEQLGLLYVKGIGVEQDYQKGYEWLEKSAIQGNSNACFYIGMMYVEGAGVKR 207
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N+ EA ++ AA + A Y Y GEG+ + +A KW+ +A + G+ A++
Sbjct: 208 NITEALKYIEIAANKNHPEAQYKLGSFYFKGEGVTQNFTEAFKWLTKAVENGNDYAKVPL 267
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
+ ++ +G ++ K + +L A H+ V+L + + D +
Sbjct: 268 AI-MYYKGDGVTKDIQKGLELCKLVADKNIPYAQHIYAVMLLSMLPLNIDECL 319
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 13/216 (6%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLY 160
+ G R+ G GV K+L K+ K A +G A + G +Y+ + E ++ +
Sbjct: 49 FKLGNRYYDGDGVEKDLSKSFQWTKKAAEQGFKSAQYNLGRLYYNGEGTERNYEESLKWF 108
Query: 161 RQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+A++ G F LG Y + +A++ +++ G AQ QL L +G G
Sbjct: 109 EKASIQGSGWAMFELGRMYSIGQGTNKDKNKAIEWFKKSAEKGFDLAQEQLGLLYVKGIG 168
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V+ + Q+ W ++A G A + + Y G G+ + +A K+++ AA+ H +AQ
Sbjct: 169 VEQDYQKGYEWLEKSAIQGNSNACFYIGMMYVEGAGVKRNITEALKYIEIAANKNHPEAQ 228
Query: 273 LEHGLGLFT-EGEMMKAVVYLELATRAGETAADHVK 307
+ G F EG + T+A E D+ K
Sbjct: 229 YKLGSFYFKGEGVTQNFTEAFKWLTKAVENGNDYAK 264
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EE +KL S G AQ++L + G GV+ +L ++ +W +AAE G+ A YN
Sbjct: 34 EEIIKL----SEEGSAEAQFKLGNRYYDGDGVEKDLSKSFQWTKKAAEQGFKSAQYNLGR 89
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATR 297
Y GEG ++ ++ KW ++A+ G G A E G +G T + KA+ + + +
Sbjct: 90 LYYNGEGTERNYEESLKWFEKASIQGSGWAMFELGRMYSIGQGTNKDKNKAIEWFKKSAE 149
Query: 298 AG 299
G
Sbjct: 150 KG 151
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 167 GDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G QF LG Y + V + +A+ G AQY L + G G + N +
Sbjct: 43 GSAEAQFKLGNRYYDGDGVEKDLSKSFQWTKKAAEQGFKSAQYNLGRLYYNGEGTERNYE 102
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 277
E+ +W+ +A+ G AM+ YS G+G +A +W K++A+ G AQ + GL
Sbjct: 103 ESLKWFEKASIQGSGWAMFELGRMYSIGQGTNKDKNKAIEWFKKSAEKGFDLAQEQLGLL 162
Query: 278 ---GLFTEGEMMKAVVYLELATRAGETAA 303
G+ E + K +LE + G + A
Sbjct: 163 YVKGIGVEQDYQKGYEWLEKSAIQGNSNA 191
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 75/200 (37%), Gaps = 47/200 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV ++ K + K A +G++ A G+MY E A+ A
Sbjct: 160 GLLYVKGIGVEQDYQKGYEWLEKSAIQGNSNACFYIGMMYVEGAGVKRNITEALKYIEIA 219
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD- 214
A P Q+ LG Y + EA K L +A G+ A+ LA+ ++G GV
Sbjct: 220 ANKNHPEAQYKLGSFYFKGEGVTQNFTEAFKWLTKAVENGNDYAKVPLAIMYYKGDGVTK 279
Query: 215 ---------------------------------FNLQEAARWYLRAAEGGYVRAMYNTSL 241
N+ E +WY++AA Y + Y +
Sbjct: 280 DIQKGLELCKLVADKNIPYAQHIYAVMLLSMLPLNIDECLKWYIKAANQYYTESQYALAE 339
Query: 242 CYSFGE-GLPLSHRQARKWM 260
Y +G+ G+ +A KW+
Sbjct: 340 LYFYGKNGVKKDIVEAYKWI 359
>gi|345860845|ref|ZP_08813131.1| sel1 repeat family protein [Desulfosporosinus sp. OT]
gi|344326071|gb|EGW37563.1| sel1 repeat family protein [Desulfosporosinus sp. OT]
Length = 204
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+P + LG+ + EAV L +A++ GH AQY+L + GRG+ N +
Sbjct: 17 NPEADYQLGMDIISGRAESKDLPEAVILFREAALEGHPGAQYELGVSYCAGRGIKQNSES 76
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
A +W++R+AE GY +A++N + +S G+G+ +A +AA GH +Q
Sbjct: 77 AVQWFIRSAENGYPKALHNLGVRHSIGKGVDEDAVRAASLFLQAASQGHALSQF 130
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCL 207
A+ L+R+AA+ G P Q+ LG+SY E AV+ +++ G+ +A + L +
Sbjct: 41 AVILFREAALEGHPGAQYELGVSYCAGRGIKQNSESAVQWFIRSAENGYPKALHNLGVRH 100
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G+GVD + AA +L+AA G+ + + ++ Y G G+ +A KW A D G
Sbjct: 101 SIGKGVDEDAVRAASLFLQAASQGHALSQFKLAVMYKIGWGVQQKDEEADKWFGLAGDTG 160
Query: 268 HGKA 271
+A
Sbjct: 161 KNEA 164
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
GR K+L +A+ F + A G A + G+ Y E+A+ + ++A G P
Sbjct: 31 GRAESKDLPEAVILFREAALEGHPGAQYELGVSYCAGRGIKQNSESAVQWFIRSAENGYP 90
Query: 170 AGQFNLGISY-----LQEEAVK---LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
NLG+ + + E+AV+ L QA+ GH +Q++LA+ G GV +EA
Sbjct: 91 KALHNLGVRHSIGKGVDEDAVRAASLFLQAASQGHALSQFKLAVMYKIGWGVQQKDEEAD 150
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+W+ A + G N +LC E + + +AR W+K A G+ + E
Sbjct: 151 KWFGLAGDTG-----KNEALC-PLSEIVKQENDRAR-WLKAAMSRGYSENAFE 196
>gi|345515304|ref|ZP_08794808.1| TPR repeat-containing protein [Bacteroides dorei 5_1_36/D4]
gi|229438003|gb|EEO48080.1| TPR repeat-containing protein [Bacteroides dorei 5_1_36/D4]
Length = 307
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 30/192 (15%)
Query: 87 VCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K ++ A + L +A + G +K+G GVRK+ A+ +L+ A G+T AM
Sbjct: 118 VTKDYSQAFKWLNKAATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAM 177
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQ 200
+ G +Y + LG+ EEA +A+ + AQ
Sbjct: 178 NNIGYLY------------------------KNGLGVPQDFEEAYFWFKKAADKNNPIAQ 213
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y + G G++ + + A+W +AA G A YN Y +G+G+ +QAR W
Sbjct: 214 YNIGNMYCYGEGMEKDFAKGAKWLTKAALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWF 273
Query: 261 KRAADCGHGKAQ 272
++A D GH KA+
Sbjct: 274 QKAIDNGHEKAK 285
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 92/233 (39%), Gaps = 16/233 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + A G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQASIA-GHVRAQYQLALCLHRGRGVDF 215
A G+P Q +G Y V+ Y S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPQ 192
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +EA W+ +AA+ A YN Y +GEG+ + KW+ +AA G+ AQ
Sbjct: 193 DFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGNAPAQYNL 252
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAML 324
G G E ++ +A + + A G A I LS + + L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSEKDTEDSFL 305
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQY +G G + + +A + + ++A GG A N Y++G G+ + QA
Sbjct: 67 HAQYLTGDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAF 126
Query: 258 KWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 294
KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 127 KWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|163844942|ref|YP_001622597.1| hypothetical protein BSUIS_B0814 [Brucella suis ATCC 23445]
gi|163675665|gb|ABY39775.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 913
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 175 LGISYLQEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+ I + EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G
Sbjct: 662 IEIPSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNA 721
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAV 289
AM+N ++ ++ G + A +W AA+ G +Q G+ GL + ++
Sbjct: 722 SAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESY 781
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 333
+ LA AG+ A ++ I + L RA V+ W+A P
Sbjct: 782 KWFALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 825
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G+ A + LA
Sbjct: 669 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLA 728
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G + A RW+ AAE G + YN + + G G+P++ ++ KW AA
Sbjct: 729 VLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAA 788
Query: 265 DCGHGKA 271
+ G A
Sbjct: 789 NAGDKDA 795
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 32/132 (24%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISL 159
L G R+ GRGV +N+ +A + A +G+ AM + +++ AA+
Sbjct: 688 LFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRW 747
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+ +AA LG Q+NLGI +G G+ NL+E
Sbjct: 748 FTEAAELGVKDSQYNLGI----------------------------LAAKGLGMPVNLEE 779
Query: 220 AARWYLRAAEGG 231
+ +W+ AA G
Sbjct: 780 SYKWFALAANAG 791
>gi|161620880|ref|YP_001594766.1| localization factor podJL [Brucella canis ATCC 23365]
gi|161337691|gb|ABX63995.1| Localization factor podJL [Brucella canis ATCC 23365]
Length = 913
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 175 LGISYLQEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+ I + EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G
Sbjct: 662 IEIPSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNA 721
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAV 289
AM+N ++ ++ G + A +W AA+ G +Q G+ GL + ++
Sbjct: 722 SAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESY 781
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 333
+ LA AG+ A ++ I + L RA V+ W+A P
Sbjct: 782 KWFALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 825
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G+ A + LA
Sbjct: 669 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLA 728
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G + A RW+ AAE G + YN + + G G+P++ ++ KW AA
Sbjct: 729 VLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAA 788
Query: 265 DCGHGKA 271
+ G A
Sbjct: 789 NAGDKDA 795
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 32/132 (24%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISL 159
L G R+ GRGV +N+ +A + A +G+ AM + +++ AA+
Sbjct: 688 LFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRW 747
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+ +AA LG Q+NLGI +G G+ NL+E
Sbjct: 748 FTEAAELGVKDSQYNLGI----------------------------LAAKGLGMPVNLEE 779
Query: 220 AARWYLRAAEGG 231
+ +W+ AA G
Sbjct: 780 SYKWFALAANAG 791
>gi|313112025|ref|ZP_07797810.1| hypothetical protein PA39016_004090004 [Pseudomonas aeruginosa
39016]
gi|386068733|ref|YP_005984037.1| hypothetical protein NCGM2_5841 [Pseudomonas aeruginosa NCGM2.S1]
gi|310884312|gb|EFQ42906.1| hypothetical protein PA39016_004090004 [Pseudomonas aeruginosa
39016]
gi|348037292|dbj|BAK92652.1| hypothetical protein NCGM2_5841 [Pseudomonas aeruginosa NCGM2.S1]
Length = 328
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
RQAA G+P F+ G + Q++ A + +A+ AG VRAQ QLA+ G G +
Sbjct: 53 RQAAETGEPQALFDFGAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQD 112
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
EAARW+ +AAE G A + Y GEG+ +A W +RAA G A E
Sbjct: 113 KTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAASGSEDA--ETN 170
Query: 277 LGLF 280
LG F
Sbjct: 171 LGWF 174
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G ++ +A F K A +G A + G++YW + D+ +A + + +AA
Sbjct: 103 YRDGDGGPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAG-TWFERAAA 161
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G + NLG YL + + +Y A+ + A L R G + ++A +W+
Sbjct: 162 SGSEDAETNLGWFYLDDS--QGVYSATSD-------EEAALLDRYAG---SREKAFQWFC 209
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+AA G RA + Y G G ++ QAR W+++AA
Sbjct: 210 KAATQGDARAQFKVGEAYWNGSGAGMNKLQARLWLEKAA 248
>gi|423313836|ref|ZP_17291771.1| hypothetical protein HMPREF1058_02383 [Bacteroides vulgatus
CL09T03C04]
gi|392684371|gb|EIY77699.1| hypothetical protein HMPREF1058_02383 [Bacteroides vulgatus
CL09T03C04]
Length = 317
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G GV KNL KA F A +G+ A + G +Y ++D ++A I YR++A
Sbjct: 117 YAYGHGVSKNLSKAKKHFQYAAQQGNPQAQLGLGTLYRLGLGVQLDYRKA-IQWYRRSAS 175
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GD NLG + E A+ +++ + AQY + + GRGV+ +L
Sbjct: 176 HGDSDAMNNLGYMFFNGLGVLPDVETALCWFGKSAAVDNPVAQYNIGVAYSLGRGVEKDL 235
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
A W ++A G A YN Y +G+G+ +A W K AA GH KA
Sbjct: 236 SVCASWLEKSALQGNAPAQYNLGRMYFWGKGVARDSVKAMLWYKEAAGRGHVKA 289
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 72/181 (39%), Gaps = 12/181 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
G + G G R + +KA F K G+ A + MY +S ++ A
Sbjct: 78 GDMYYRGLGGRVDYEKAFALFEKSGEAGNMNACNNLAFMYAYGHGVSKNLSKAKKHFQYA 137
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALCLHRGRGVDF 215
A G+P Q LG Y V+L Y+ +I G A L G GV
Sbjct: 138 AQQGNPQAQLGLGTLYRLGLGVQLDYRKAIQWYRRSASHGDSDAMNNLGYMFFNGLGVLP 197
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+++ A W+ ++A A YN + YS G G+ W++++A G+ AQ
Sbjct: 198 DVETALCWFGKSAAVDNPVAQYNIGVAYSLGRGVEKDLSVCASWLEKSALQGNAPAQYNL 257
Query: 276 G 276
G
Sbjct: 258 G 258
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVR 198
Y E D EA A + Q+ LG Y + E+A L ++ AG++
Sbjct: 49 YREHDYDEARNRFILLAGIDSASYAQYLLGDMYYRGLGGRVDYEKAFALFEKSGEAGNMN 108
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
A LA G GV NL +A + + AA+ G +A Y G G+ L +R+A +
Sbjct: 109 ACNNLAFMYAYGHGVSKNLSKAKKHFQYAAQQGNPQAQLGLGTLYRLGLGVQLDYRKAIQ 168
Query: 259 WMKRAADCGHGKAQLEHGLG-LFTEG 283
W +R+A HG + + LG +F G
Sbjct: 169 WYRRSAS--HGDSDAMNNLGYMFFNG 192
>gi|424844207|ref|ZP_18268818.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
gi|363985645|gb|EHM12475.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
Length = 829
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 30/256 (11%)
Query: 76 FTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRK-NLDKALDSFLKGAAR 134
F P + A CK+ A + ++ G + G G R+ + +A + + K A
Sbjct: 535 FGEPDMEKAWKACKASAQAGNSAAQCLL----GTMYLEGAGGRRPDPAQAFEWYSKAAES 590
Query: 135 GSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------Q 181
G+T+A + +Y MD K AA Y++AA G P GQ+NLG L
Sbjct: 591 GNTVAQCNLAKLYATGTGTAMDLKTAA-EWYQRAASGGSPQGQYNLGRMLLIGLGQWKNV 649
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
EA+KLL A+ + A QL + +G G+ ++A ++L AA GY A YN
Sbjct: 650 PEALKLLQSAADQSYAPALNQLGVLYSQGAEGLPHQPEKALEYFLPAASQGYRIAQYNLG 709
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKA--QL----EHGLGLFTEGEMMKAVVYLEL 294
+ + G+ L ++ AR+W ++A + H +A QL EHGLG ++ A++ ++
Sbjct: 710 VLCASGD-LGDKNKAARRWFRKAMNQDHPEAARQLGVLYEHGLGGLV--DLPLALLCYQI 766
Query: 295 ATRAGET-AADHVKNV 309
A R G AAD V+ +
Sbjct: 767 AQRLGSAGAADDVRRL 782
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG-DPAGQF---------NLGI 177
+ + A GS +++ G++ + D + + L QAA G PA +F +G
Sbjct: 227 YKQAADEGSLPSLMALGILKMQKDARAEGLRLLSQAAAGGYTPAKKFLAQIYENGGGMGF 286
Query: 178 SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
+ ++A +L A+ +G A L G GV+ N +AA Y +AA G MY
Sbjct: 287 TPEPKKAFQLYTSAATSGDSEAYIDLGRLYETGVGVEKNKAKAAEMYKKAASFGLPEGMY 346
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLE 293
N G+G+ + +W+++AA G AQ + G+ G + + KA L+
Sbjct: 347 NMGRIAIIGKGVAQDRKAGVQWLEKAAAAGSTNAQRDLGVLCARGDWVPKNLAKAKKLLK 406
Query: 294 LATRAGETAADHVKNVILQQLSATSRDRAMLVV 326
A+ +G+T A IL S ++A+ ++
Sbjct: 407 EASASGDTEATLALAKILMDEGDKSSNQAVALL 439
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 16/173 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G G KA + A G + A +D G +Y E +K +AA +Y++AA G
Sbjct: 283 GMGFTPEPKKAFQLYTSAATSGDSEAYIDLGRLYETGVGVEKNKAKAA-EMYKKAASFGL 341
Query: 169 PAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
P G +N+ G++ ++ V+ L +A+ AG AQ L + RG V NL +A
Sbjct: 342 PEGMYNMGRIAIIGKGVAQDRKAGVQWLEKAAAAGSTNAQRDLGVLCARGDWVPKNLAKA 401
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ A+ G A +L + S QA +K AA G +AQL
Sbjct: 402 KKLLKEASASGDTEA--TLALAKILMDEGDKSSNQAVALLKGAAGDGSAQAQL 452
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 26/210 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVLGDP 169
G+GV ++ + K AA GST A D G++ W A L ++A+ GD
Sbjct: 355 GKGVAQDRKAGVQWLEKAAAAGSTNAQRDLGVLCARGDWVPKNLAKAKKLLKEASASGDT 414
Query: 170 AGQFNLGISYLQE------EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAAR 222
L + E +AV LL A+ G +AQ L L G D ++ +A
Sbjct: 415 EATLALAKILMDEGDKSSNQAVALLKGAAGDGSAQAQLLLGQLFESSSTGSDDSMDQALV 474
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA-----RKWMKRAADCGHGKA--QLEH 275
WY +AA Y A+ +L Y +H A + + R+A G+ A +L
Sbjct: 475 WYKKAAAQDYPPALCALALFYL------ENHEHADPAVIQNLLTRSARLGYAPAGYKLSQ 528
Query: 276 GL--GLFTEGEMMKAVVYLELATRAGETAA 303
+ G+F E +M KA + + +AG +AA
Sbjct: 529 FIQQGVFGEPDMEKAWKACKASAQAGNSAA 558
>gi|254237404|ref|ZP_04930727.1| hypothetical protein PACG_03479 [Pseudomonas aeruginosa C3719]
gi|392981771|ref|YP_006480358.1| hypothetical protein PADK2_01805 [Pseudomonas aeruginosa DK2]
gi|419755842|ref|ZP_14282194.1| hypothetical protein CF510_22789 [Pseudomonas aeruginosa
PADK2_CF510]
gi|126169335|gb|EAZ54846.1| hypothetical protein PACG_03479 [Pseudomonas aeruginosa C3719]
gi|384397504|gb|EIE43915.1| hypothetical protein CF510_22789 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317276|gb|AFM62656.1| hypothetical protein PADK2_01805 [Pseudomonas aeruginosa DK2]
Length = 328
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
RQAA G+P F+ G + Q++ A + +A+ AG VRAQ QLA+ G G +
Sbjct: 53 RQAAETGEPQALFDFGAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQD 112
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
EAARW+ +AAE G A + Y GEG+ +A W +RAA G A E
Sbjct: 113 KTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAASGSEDA--ETN 170
Query: 277 LGLF 280
LG F
Sbjct: 171 LGWF 174
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G ++ +A F K A +G A + G++YW + D+ +A + + +AA
Sbjct: 103 YRDGDGGPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAG-TWFERAAA 161
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G + NLG YL + + +Y A+ + A L R G + ++A W+
Sbjct: 162 SGSEDAETNLGWFYLDDS--QGVYSAT-------SDEEAALLDRYAG---SREKAFHWFC 209
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+AA G RA + Y G G ++ QAR W+++AA
Sbjct: 210 KAATQGDARAQFKVGEAYWNGSGAGMNKLQARLWLEKAA 248
>gi|417688411|ref|ZP_12337655.1| hypothetical protein SB521682_0652 [Shigella boydii 5216-82]
gi|332094316|gb|EGI99367.1| hypothetical protein SB521682_0652 [Shigella boydii 5216-82]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAIVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL------GISYLQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G +Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVVQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G + A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSIGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 82/198 (41%), Gaps = 22/198 (11%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGIS 178
++D ++ A +G A G Y + E A + AA G Q++LG
Sbjct: 12 SIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSQDDEKAFYWLKLAAEQGHCEAQYSLGQK 71
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y + E A+ L +A++ GH A L L RG D N +EA WY AAE
Sbjct: 72 YTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRGE--DPNYKEAIVWYQIAAES 129
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGE 284
G A N Y G G+ + A W K+AA GH AQ E G G+ + E
Sbjct: 130 GMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGV-VQNE 188
Query: 285 MMKAVVYLELATRAGETA 302
+ A YL+ A + A
Sbjct: 189 TLAAFWYLKSAQQGNRHA 206
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + + A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVVQNETLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G + A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSIGAYVNIGYMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
>gi|306841654|ref|ZP_07474343.1| Peptidoglycan-binding domain 1 protein [Brucella sp. BO2]
gi|306288267|gb|EFM59647.1| Peptidoglycan-binding domain 1 protein [Brucella sp. BO2]
Length = 946
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 666 EEAGPAALREAAAKGDMRALFEIGNRYMEGRGVAANVKEAAKWYQLAADQGFAPAQYRIG 725
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 726 SFNEKGLGMARNLEKAKNWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 785
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 786 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLA 845
Query: 321 RAMLVVDSWRAMP 333
RA V+ W+A P
Sbjct: 846 RAKGAVELWKAKP 858
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L G R+ GRGV N +K AA+ LA D G A + YR
Sbjct: 685 LFEIGNRYMEGRGVAAN--------VKEAAKWYQLA-ADQGF----------APAQYR-- 723
Query: 164 AVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
G FN LG++ E+A A+ G+ A + LA+ G + A
Sbjct: 724 ------IGSFNEKGLGMARNLEKAKNWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAA 777
Query: 221 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
RW+ AAE G + YN + + G G+P++ ++ KW AA+ G A
Sbjct: 778 VRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDA 828
>gi|437835463|ref|ZP_20845283.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435300478|gb|ELO76566.1| sel1 repeat-containing family protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
Length = 332
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEAAISLYRQA 163
G+ ++ G G+ K+ ++AL + + A +G+ ++ MYW A Y ++
Sbjct: 144 GRMYEAGLGIEKDYNRALYWYKQAALQGNATGQMNLADMYWGGRGTTKNLRLATLWYLRS 203
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A+ QF LG +Y + E VK YQ A+ G+ A + +G GV+
Sbjct: 204 ALQDKAHSQFQLGYAYNEGEGVKQDYQQAMHWYQQAAAHGNSNACVNIGWMYKQGHGVER 263
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +EA W+ RAAE V A YN Y G G + +QA W ++ G
Sbjct: 264 DDEEALSWFHRAAEADNVTAWYNLGFMYRDGRGTEVDVKQALYWFQKVQPTG 315
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 77/185 (41%), Gaps = 39/185 (21%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGA-------ARGSTLAMVDAGLM 146
AL+ R A L W + K G+ N +A+ + KGA A+ + M +AGL
Sbjct: 95 ALQGHRHAFNTLGWVQEGK--TGMESNYAQAVIWYRKGAEQSHCYYAQNNLGRMYEAGLG 152
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALC 206
E D A + Y+QAA+ G+ GQ NL Y
Sbjct: 153 I-EKDYNRA-LYWYKQAALQGNATGQMNLADMYW-------------------------- 184
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
GRG NL+ A WYLR+A + + Y+ GEG+ ++QA W ++AA
Sbjct: 185 --GGRGTTKNLRLATLWYLRSALQDKAHSQFQLGYAYNEGEGVKQDYQQAMHWYQQAAAH 242
Query: 267 GHGKA 271
G+ A
Sbjct: 243 GNSNA 247
>gi|425744108|ref|ZP_18862169.1| Sel1 repeat protein [Acinetobacter baumannii WC-323]
gi|425491909|gb|EKU58186.1| Sel1 repeat protein [Acinetobacter baumannii WC-323]
Length = 259
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 72 IAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKG 131
I T+ Q A S V + + +A +L + G R+ G+ V ++ KA F +
Sbjct: 8 ILIVLTIFQFSACSKVTRDNQEV-----QAELLYQQGGRYFLGQDVPQDYIKAKALFEQA 62
Query: 132 AARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKL 187
A +GS +A D MY++ +E A Y +AA P Q+NLGI Y V+
Sbjct: 63 AQQGSAIAQNDLAGMYFKGLGTAKNEEKAFYWYERAAQKNFPEAQYNLGIMYDHGHYVEK 122
Query: 188 LYQASIA--------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
++A G+ +AQ+ LA GRGV ++ A Y +AA A YN
Sbjct: 123 DRNKALAFYRLSADQGYAKAQFNLANAYSSGRGVKKDIGLAMELYEKAARQNMPEAQYNL 182
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+ YS G +P + ++A K + AA+ AQ H LG
Sbjct: 183 ANIYSDGLLVPKNEKRALKLYESAAEQNFPMAQ--HNLG 219
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G FK G G KN +KA + + A + A + G+MY + + A++ YR +
Sbjct: 76 GMYFK-GLGTAKNEEKAFYWYERAAQKNFPEAQYNLGIMYDHGHYVEKDRNKALAFYRLS 134
Query: 164 AVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G QFNL +Y VK L +A+ AQY LA G V
Sbjct: 135 ADQGYAKAQFNLANAYSSGRGVKKDIGLAMELYEKAARQNMPEAQYNLANIYSDGLLVPK 194
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA---- 271
N + A + Y AAE + A +N Y E L +A+ W K+A + G ++
Sbjct: 195 NEKRALKLYESAAEQNFPMAQHNLGYLY-INEYHNL--EKAKYWFKKAYENGVKESGEVL 251
Query: 272 -QLEH 275
QLEH
Sbjct: 252 KQLEH 256
>gi|116054088|ref|YP_788531.1| hypothetical protein PA14_04700 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296386856|ref|ZP_06876355.1| hypothetical protein PaerPAb_01932 [Pseudomonas aeruginosa PAb1]
gi|355646650|ref|ZP_09054523.1| hypothetical protein HMPREF1030_03609 [Pseudomonas sp. 2_1_26]
gi|416877333|ref|ZP_11919754.1| hypothetical protein PA15_16773 [Pseudomonas aeruginosa 152504]
gi|421172080|ref|ZP_15629860.1| hypothetical protein PACI27_0337 [Pseudomonas aeruginosa CI27]
gi|115589309|gb|ABJ15324.1| hypothetical protein PA14_04700 [Pseudomonas aeruginosa UCBPP-PA14]
gi|334839689|gb|EGM18365.1| hypothetical protein PA15_16773 [Pseudomonas aeruginosa 152504]
gi|354828370|gb|EHF12492.1| hypothetical protein HMPREF1030_03609 [Pseudomonas sp. 2_1_26]
gi|404538307|gb|EKA47850.1| hypothetical protein PACI27_0337 [Pseudomonas aeruginosa CI27]
Length = 328
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
RQAA G+P F+ G + Q++ A + +A+ AG VRAQ QLA+ G G +
Sbjct: 53 RQAAETGEPQALFDFGAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQD 112
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
EAARW+ +AAE G A + Y GEG+ +A W +RAA G A E
Sbjct: 113 KTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAASGSEDA--ETN 170
Query: 277 LGLF 280
LG F
Sbjct: 171 LGWF 174
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G ++ +A F K A +G A + G++YW + D+ +A + + +AA
Sbjct: 103 YRDGDGGPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAG-TWFERAAA 161
Query: 166 LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G + NLG YL + + +Y A+ + A L R G + ++A +W+
Sbjct: 162 SGSEDAETNLGWFYLDDS--QGVYSATSD-------EEAALLDRYAG---SREKAFQWFC 209
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+AA G RA + Y G G ++ QAR W+++AA
Sbjct: 210 KAATQGDARAQFKVGEAYWNGSGAGMNKLQARLWLEKAA 248
>gi|357613331|gb|EHJ68442.1| putative Sel1l protein [Danaus plexippus]
Length = 737
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 13/171 (7%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
F GRGV +L+KAL F + A G+ +A G +Y E E A+ +++AA
Sbjct: 354 HFTGGRGVTLDLNKALHYFTQAAKTGNAVANAFLGKIYLEGGDGIKADNETAMRYFKKAA 413
Query: 165 VLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
+ +P GQ LG+ +LQ V K A+ G V Q L G GV +
Sbjct: 414 EMNNPIGQSGLGVMHLQGRGVAKDPTAAFKYFAMAANQGWVEGQLHLGFMYFGGIGVRRD 473
Query: 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
++A +++ A++ G+V A+Y+ +L ++ G G+ S A + +K + G
Sbjct: 474 FKQANKYFSLASQSGHVLALYHLALMHAQGLGVMRSCATAVELLKNVCERG 524
>gi|167035146|ref|YP_001670377.1| Sel1 domain-containing protein [Pseudomonas putida GB-1]
gi|166861634|gb|ABZ00042.1| Sel1 domain protein repeat-containing protein [Pseudomonas putida
GB-1]
Length = 365
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 168 DPAGQFNLGISYLQ------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
DP QFNLG+ + + + A + +A+ G+ AQ+ LA+C G G + AA
Sbjct: 12 DPVDQFNLGLRFSKARCAEPKVAFEWYRKAAKQGYAPAQHNLAVCYATGVGTSQDEVLAA 71
Query: 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
WY +AA G+ A N CY+ GEG+P+ A W ++AA G+ AQ
Sbjct: 72 HWYRKAAVQGHAPAQCNLGACYALGEGVPVDDSMAVSWTRKAAVQGYVAAQ 122
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 152 KKEAAISLYRQAAVLGDPAGQFNLGISYL------QEE--AVKLLYQASIAGHVRAQYQL 203
+ + A YR+AA G Q NL + Y Q+E A +A++ GH AQ L
Sbjct: 30 EPKVAFEWYRKAAKQGYAPAQHNLAVCYATGVGTSQDEVLAAHWYRKAAVQGHAPAQCNL 89
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
C G GV + A W +AA GYV A YN + Y+ G G+ +S+ A W ++A
Sbjct: 90 GACYALGEGVPVDDSMAVSWTRKAAVQGYVAAQYNLASFYTVGRGVGVSYSIAAAWFRKA 149
Query: 264 ADCGHGKAQLEH 275
AD G A+ ++
Sbjct: 150 ADRGSALAEAKY 161
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
Q+ L L + R + + A WY +AA+ GY A +N ++CY+ G G A W
Sbjct: 16 QFNLGLRFSKARCAEPKV--AFEWYRKAAKQGYAPAQHNLAVCYATGVGTSQDEVLAAHW 73
Query: 260 MKRAADCGHGKAQLEHG 276
++AA GH AQ G
Sbjct: 74 YRKAAVQGHAPAQCNLG 90
>gi|237710057|ref|ZP_04540538.1| TPR repeat containing protein [Bacteroides sp. 9_1_42FAA]
gi|229456150|gb|EEO61871.1| TPR repeat containing protein [Bacteroides sp. 9_1_42FAA]
Length = 307
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+G GVRK+ A+ +L+ A G+T AM + G +Y
Sbjct: 145 GSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLY-------------------- 184
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ LG+ EEA +A+ + AQY + G G++ + + A+W +A
Sbjct: 185 ----KNGLGVPKDFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKA 240
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A G A YN Y +G+G+ +QAR W ++A D GH KA+
Sbjct: 241 ALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAK 285
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 92/233 (39%), Gaps = 16/233 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + A G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQASIA-GHVRAQYQLALCLHRGRGVDF 215
A G+P Q +G Y V+ Y S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPK 192
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +EA W+ +AA+ A YN Y +GEG+ + KW+ +AA G+ AQ
Sbjct: 193 DFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGNAPAQYNL 252
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAML 324
G G E ++ +A + + A G A I LS + + L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSEKDTEDSFL 305
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 182 EEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
E+A KLL + A I AQY +G G + + +A + + ++A GG A N
Sbjct: 50 EKARKLLEKIARIDTAHHAQYLTGDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIG 109
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 294
Y++G G+ + QA KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 110 FMYTYGLGVTKDYSQAFKWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|212693317|ref|ZP_03301445.1| hypothetical protein BACDOR_02829 [Bacteroides dorei DSM 17855]
gi|212664134|gb|EEB24706.1| Sel1 repeat protein [Bacteroides dorei DSM 17855]
Length = 307
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+G GVRK+ A+ +L+ A G+T AM + G +Y
Sbjct: 145 GSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLY-------------------- 184
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ LG+ EEA +A+ + AQY + G G++ + + A+W +A
Sbjct: 185 ----KNGLGVPKDFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKA 240
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A G A YN Y +G+G+ +QAR W ++A D GH KA+
Sbjct: 241 ALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAK 285
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 92/233 (39%), Gaps = 16/233 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + A G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQASIA-GHVRAQYQLALCLHRGRGVDF 215
A G+P Q +G Y V+ Y S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPK 192
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +EA W+ +AA+ A YN Y +GEG+ + KW+ +AA G+ AQ
Sbjct: 193 DFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGNAPAQYNL 252
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAML 324
G G E ++ +A + + A G A I LS + + L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSEKDTEDSFL 305
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQY +G G + + +A + + ++A GG A N Y++G G+ + QA
Sbjct: 67 HAQYLTGDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAF 126
Query: 258 KWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 294
KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 127 KWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|326800209|ref|YP_004318028.1| Sel1 domain-containing protein repeat-containing protein
[Sphingobacterium sp. 21]
gi|326550973|gb|ADZ79358.1| Sel1 domain protein repeat-containing protein [Sphingobacterium sp.
21]
Length = 826
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
+ LG+ ++A+ QA+ AG+ R +LALC GV+F+ ++ ++AAE GY
Sbjct: 538 YGLGVEENPDQALYYYQQAADAGYPRGLVELALCYEYEYGVNFDAEKVLNLMIKAAEQGY 597
Query: 233 VRAMYNTSLCY---SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
A Y + Y S GE +P++ QA W+ +AAD G+ A +E G
Sbjct: 598 AFAQYKVGVYYMHGSLGEQIPINSEQAIMWLNKAADAGYPYAYVELG 644
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 16/184 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G+ +++G N++KA F KG + ++ + MY + D K+A L+ +A
Sbjct: 425 GRMYRYGIAGEINIEKAKAYFEKGVEQNIPFSITELAFMYEDGTLAQDYKKA-FELFGKA 483
Query: 164 AVLGDPAGQFNLGISYLQ----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
A + G YLQ E+A + + V Y+ C G GV
Sbjct: 484 AEGNSAYAMYCYG-QYLQNGYNDGEKAPEQAFYWFQKGAELQEVNCIYETGRCYRYGLGV 542
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ N +A +Y +AA+ GY R + +LCY + G+ + M +AA+ G+ AQ
Sbjct: 543 EENPDQALYYYQQAADAGYPRGLVELALCYEYEYGVNFDAEKVLNLMIKAAEQGYAFAQY 602
Query: 274 EHGL 277
+ G+
Sbjct: 603 KVGV 606
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 46/204 (22%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMD---KKEAAISLYRQAA---VL 166
G + N ++A+ K A G A V+ G Y W+ D + + A + Y +A+ V+
Sbjct: 614 GEQIPINSEQAIMWLNKAADAGYPYAYVELGDYYLWDYDNLNEADRAFAFYEKASEQDVI 673
Query: 167 GDPAG---QFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
+ G ++ +GI Y EA K A+ + A Y+L C G GV +EA +W
Sbjct: 674 AEGLGVCYEYGIGIDYSMSEAFKYYEMAANKNVIGAMYRLGNCYLNGNGVSEQPEEAYKW 733
Query: 224 YLRAAEGGYVRAMYNTSL------------------------------------CYSFGE 247
+ AA+ G V + Y CY G+
Sbjct: 734 FFNAAQQGNVPSQYLLGKLLLKGKGVAMNKEEGIEWLQKAAEQQYAAAQYELGNCYLMGD 793
Query: 248 GLPLSHRQARKWMKRAADCGHGKA 271
GL + A W ++AA+ GH +A
Sbjct: 794 GLEENEDNAMYWFEQAAEKGHERA 817
>gi|260654388|ref|ZP_05859878.1| Sel1 repeat family protein [Jonquetella anthropi E3_33 E1]
gi|260631021|gb|EEX49215.1| Sel1 repeat family protein [Jonquetella anthropi E3_33 E1]
Length = 831
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 30/256 (11%)
Query: 76 FTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRK-NLDKALDSFLKGAAR 134
F P + A CK+ A + ++ G + G G R+ + +A + + K A
Sbjct: 537 FGEPDMEKAWKACKASAQAGNSAAQCLL----GTMYLEGAGGRRPDPAQAFEWYSKAAES 592
Query: 135 GSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------Q 181
G+T+A + +Y MD K AA Y++AA G P GQ+NLG L
Sbjct: 593 GNTVAQCNLAKLYATGTGTAMDLKTAA-EWYQRAASGGSPQGQYNLGRMLLIGLGQWKNV 651
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
EA+KLL A+ + A QL + +G G+ ++A ++L AA GY A YN
Sbjct: 652 PEALKLLQSAADQSYAPALNQLGVLYSQGAEGLPHQPEKALEYFLPAASQGYRIAQYNLG 711
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKA--QL----EHGLGLFTEGEMMKAVVYLEL 294
+ + G+ L ++ AR+W ++A + H +A QL EHGLG ++ A++ ++
Sbjct: 712 VLCASGD-LGDKNKAARRWFRKAMNQDHPEAARQLGVLYEHGLGGLV--DLPLALLCYQI 768
Query: 295 ATRAGET-AADHVKNV 309
A R G AAD V+ +
Sbjct: 769 AQRLGSAGAADDVRRL 784
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG-DPAGQF---------NLGI 177
+ + A GS +++ G++ + D + L +AA G PA +F +G
Sbjct: 229 YKQAADEGSLPSVMALGILKMQKDAHTEGLRLMTKAADGGYAPAKKFLAQIYENGGGMGF 288
Query: 178 SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
+ ++A +L A+ +G A L G GV+ N +AA Y +AA G MY
Sbjct: 289 TPQPKKAFQLYTSAATSGDNEAYIDLGRLYETGVGVEKNKAKAAEMYKKAASFGLPEGMY 348
Query: 238 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLE 293
N G+G+ + +W+++AA G AQ + G+ G + + KA L+
Sbjct: 349 NMGRIAIIGKGVAQDRKAGVQWLEKAAAAGSTNAQRDLGVLCARGDWVPKNLAKAKKLLK 408
Query: 294 LATRAGETAADHVKNVILQQLSATSRDRAMLVV 326
A+ +G+T A IL S ++A+ ++
Sbjct: 409 EASASGDTEATLALAKILMDEGDKSSNQAVALL 441
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 39/218 (17%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G G KA + A G A +D G +Y E +K +AA +Y++AA G
Sbjct: 285 GMGFTPQPKKAFQLYTSAATSGDNEAYIDLGRLYETGVGVEKNKAKAA-EMYKKAASFGL 343
Query: 169 PAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
P G +N+G ++A+ G+GV + + +W +AA
Sbjct: 344 PEGMYNMG-------------------------RIAII---GKGVAQDRKAGVQWLEKAA 375
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 288
G A + + + G+ +P + +A+K +K A+ G +A L L EG+
Sbjct: 376 AAGSTNAQRDLGVLCARGDWVPKNLAKAKKLLKEASASGDTEATLALAKILMDEGDKSSN 435
Query: 289 VVYLELATRAGETAADHVKNVILQQL---SATSRDRAM 323
L AG+ +A ++L QL S+T D +M
Sbjct: 436 QAVALLKGAAGDGSAQA--QLLLGQLFESSSTGSDDSM 471
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 26/210 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVLGDP 169
G+GV ++ + K AA GST A D G++ W A L ++A+ GD
Sbjct: 357 GKGVAQDRKAGVQWLEKAAAAGSTNAQRDLGVLCARGDWVPKNLAKAKKLLKEASASGDT 416
Query: 170 AGQFNLGISYLQE------EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAAR 222
L + E +AV LL A+ G +AQ L L G D ++ +A
Sbjct: 417 EATLALAKILMDEGDKSSNQAVALLKGAAGDGSAQAQLLLGQLFESSSTGSDDSMDQALV 476
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA-----RKWMKRAADCGHGKA--QLEH 275
WY +AA Y A+ +L Y +H A + + R+A G+ A +L
Sbjct: 477 WYKKAAAQDYPPALCALALFYL------ENHEHADPAVIQNLLTRSARLGYAPAGYKLSQ 530
Query: 276 GL--GLFTEGEMMKAVVYLELATRAGETAA 303
+ G+F E +M KA + + +AG +AA
Sbjct: 531 FIQQGVFGEPDMEKAWKACKASAQAGNSAA 560
>gi|317050815|ref|YP_004111931.1| Sel1 domain-containing protein repeat-containing protein
[Desulfurispirillum indicum S5]
gi|316945899|gb|ADU65375.1| Sel1 domain protein repeat-containing protein [Desulfurispirillum
indicum S5]
Length = 329
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 95/229 (41%), Gaps = 43/229 (18%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKE 154
+EA+ L + G G+ +N+ +A + + K A +G+ A + D E
Sbjct: 118 QEALAFL-----YATGSGLSRNIPRAFEWYEKAARQGNPQAQFALAFLLAATLESDDVSE 172
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
S YRQAA G Q+NL Y+ E +
Sbjct: 173 EVHSWYRQAAEQGHLLAQYNLATLYINEPQWR---------------------------- 204
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
N EAARWY AA GY RA YN +L YS G G+ S +A W +RAA G A
Sbjct: 205 -NETEAARWYESAARQGYCRAQYNLALLYSQGLGIERSEERALYWYERAAQQGEPAAMNN 263
Query: 275 HGL----GLF-TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATS 318
G G + E +++KA VY A A A +N +L+QL + +
Sbjct: 264 LGAIYANGFYGVEKDLVKAYVYFHRAAAAAHERARINRNALLEQLESEA 312
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G R+Q+ LA G G+ + Q+AA WY RAA+ G A + Y+ G GL +
Sbjct: 77 GDARSQWLLATLYQHGLGLAPSAQDAAIWYERAAQQGVAEAQEALAFLYATGSGLSRNIP 136
Query: 255 QARKWMKRAADCGH 268
+A +W ++AA G+
Sbjct: 137 RAFEWYEKAARQGN 150
>gi|265753706|ref|ZP_06089061.1| TPR repeat-containing protein [Bacteroides sp. 3_1_33FAA]
gi|423231363|ref|ZP_17217766.1| hypothetical protein HMPREF1063_03586 [Bacteroides dorei
CL02T00C15]
gi|423238520|ref|ZP_17219636.1| hypothetical protein HMPREF1065_00259 [Bacteroides dorei
CL03T12C01]
gi|423245952|ref|ZP_17227025.1| hypothetical protein HMPREF1064_03231 [Bacteroides dorei
CL02T12C06]
gi|263235420|gb|EEZ20944.1| TPR repeat-containing protein [Bacteroides sp. 3_1_33FAA]
gi|392628249|gb|EIY22282.1| hypothetical protein HMPREF1063_03586 [Bacteroides dorei
CL02T00C15]
gi|392637458|gb|EIY31326.1| hypothetical protein HMPREF1064_03231 [Bacteroides dorei
CL02T12C06]
gi|392648203|gb|EIY41893.1| hypothetical protein HMPREF1065_00259 [Bacteroides dorei
CL03T12C01]
Length = 307
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+G GVRK+ A+ +L+ A G+T AM + G +Y
Sbjct: 145 GSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLY-------------------- 184
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ LG+ EEA +A+ + AQY + G G++ + + A+W +A
Sbjct: 185 ----KNGLGVPKDFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKA 240
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A G A YN Y +G+G+ +QAR W ++A D GH KA+
Sbjct: 241 ALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAK 285
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 92/233 (39%), Gaps = 16/233 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + A G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQASIA-GHVRAQYQLALCLHRGRGVDF 215
A G+P Q +G Y V+ Y S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPK 192
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +EA W+ +AA+ A YN Y +GEG+ + KW+ +AA G+ AQ
Sbjct: 193 DFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGNAPAQYNL 252
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAML 324
G G E ++ +A + + A G A I LS + + L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSEKDTEDSFL 305
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQY +G G + + +A + + ++A GG A N Y++G G+ + QA
Sbjct: 67 HAQYLTGDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAF 126
Query: 258 KWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 294
KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 127 KWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|419798026|ref|ZP_14323469.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|385696367|gb|EIG26856.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 199
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 14/158 (8%)
Query: 138 LAMVDAGLM--YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ---------EEAVK 186
LA++ G++ W D + +L Q+A G+ A QFNLG+ Y + EA K
Sbjct: 10 LALLSLGIVQAVWADDVPDLQKTL--QSARQGNAAAQFNLGLMYDKGQGGVRQDHAEAFK 67
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
QA+ G V AQY L + RG GV + +A +WY +AA+ G+ +A YN + Y G
Sbjct: 68 WYSQAAKQGFVLAQYNLGVMYDRGLGVRKDYAQAVKWYRQAAQQGFAQAQYNLGVMYYDG 127
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
G+ + QA KWM++ A G+ +AQ G+ ++ EG+
Sbjct: 128 LGVRKDYSQAAKWMRQTAQQGNARAQYNLGV-MYAEGQ 164
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 125 LDSFLKGAARGSTLAMVDAGLMYWEMDKKEA--------AISLYRQAAVLGDPAGQFNLG 176
L L+ A +G+ A + GLMY DK + A Y QAA G Q+NLG
Sbjct: 29 LQKTLQSARQGNAAAQFNLGLMY---DKGQGGVRQDHAEAFKWYSQAAKQGFVLAQYNLG 85
Query: 177 ISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+ Y + +AVK QA+ G +AQY L + + G GV + +AA+W + A
Sbjct: 86 VMYDRGLGVRKDYAQAVKWYRQAAQQGFAQAQYNLGVMYYDGLGVRKDYSQAAKWMRQTA 145
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ G RA YN + Y+ G+G+ + + A++W A + G+
Sbjct: 146 QQGNARAQYNLGVMYAEGQGVRQNLKVAKEWFGMACNNGN 185
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQAAVLGDPAG 171
GVR++ +A + + A +G LA + G+MY + K A A+ YRQAA G
Sbjct: 57 GVRQDHAEAFKWYSQAAKQGFVLAQYNLGVMYDRGLGVRKDYAQAVKWYRQAAQQGFAQA 116
Query: 172 QFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
Q+NLG+ Y +A K + Q + G+ RAQY L + G+GV NL+ A W
Sbjct: 117 QYNLGVMYYDGLGVRKDYSQAAKWMRQTAQQGNARAQYNLGVMYAEGQGVRQNLKVAKEW 176
Query: 224 YLRAAEGGYVRAMYNTSLCYSF 245
+ A G N S C ++
Sbjct: 177 FGMACNNG------NQSGCENY 192
>gi|422018504|ref|ZP_16365061.1| Sel1 domain-containing protein repeat-containing protein
[Providencia alcalifaciens Dmel2]
gi|414104796|gb|EKT66361.1| Sel1 domain-containing protein repeat-containing protein
[Providencia alcalifaciens Dmel2]
Length = 353
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCL 207
A + ++A LG Q +LG+ YL + A+K L A+ G V AQ+ LAL
Sbjct: 212 AFQYFTRSAELGFSPAQNSLGMLYLAGQGTKRDTVSAIKWLTLAAEQGEVSAQFNLALIY 271
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
RG G+ N +A +W+++AA A Y + CY +G G+P + +A W + AA G
Sbjct: 272 ARGDGITANQAKACQWFIKAANQNSRDAQYASGACYQYGMGVPQNDNKALSWYRLAAKQG 331
Query: 268 HGKAQ 272
+AQ
Sbjct: 332 DERAQ 336
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQ L + G+G + A +W AAE G V A +N +L Y+ G+G+ +
Sbjct: 223 GFSPAQNSLGMLYLAGQGTKRDTVSAIKWLTLAAEQGEVSAQFNLALIYARGDGITANQA 282
Query: 255 QARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
+A +W +AA+ AQ G G+ KA+ + LA + G+ A K VI
Sbjct: 283 KACQWFIKAANQNSRDAQYASGACYQYGMGVPQNDNKALSWYRLAAKQGDERAQ--KKVI 340
Query: 311 L 311
+
Sbjct: 341 I 341
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
K L + + +G AQ+ LA+ ++ G L +AA WY +A + +A N +L Y
Sbjct: 36 KTLTELAHSGQAEAQFNLAM-FYQSHG---QLDKAAYWYKLSASQQFTKAQINLALMYQQ 91
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQL 273
G G+ + ++ +WM+ AA G Q+
Sbjct: 92 GVGIGKNEKEMLRWMEAAAKAGDPIGQM 119
>gi|348676175|gb|EGZ15993.1| hypothetical protein PHYSODRAFT_354845 [Phytophthora sojae]
Length = 327
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQAAVLGD 168
+G G RKN KA + F K A G A ++ MY DK E A++ +AA GD
Sbjct: 140 NGDGTRKNEKKAFELFKKCAESGIPPAYMNVSNMYMSGTGTDKNELEALTWLIKAADAGD 199
Query: 169 PAGQFNLGISYL---------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
P + LG Y Q AV+ A+ G V AQ+ L G GV + +
Sbjct: 200 PTAKSRLGEYYSLGKGGVQKNQARAVQYYKDAATTGIVTAQFNLGYLFLTGDGVPKDPLQ 259
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAA 264
A + +AAE G+V AM N + Y G G +P ARKW++ AA
Sbjct: 260 AEALFRKAAEKGFVMAMVNLAQMYRTGYGKVPKDLETARKWLELAA 305
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 176 GISYLQEEA---VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
GI + +++A K + + AGH + A L G G N ++A + + AE G
Sbjct: 104 GIGFPKKDAASATKYFKELAAAGHGWGAFAYADALSNGDGTRKNEKKAFELFKKCAESGI 163
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A N S Y G G + +A W+ +AAD G A+
Sbjct: 164 PPAYMNVSNMYMSGTGTDKNELEALTWLIKAADAGDPTAK 203
>gi|187930788|ref|YP_001901275.1| Sel1 domain-containing protein repeat-containing protein [Ralstonia
pickettii 12J]
gi|404394816|ref|ZP_10986619.1| hypothetical protein HMPREF0989_03031 [Ralstonia sp. 5_2_56FAA]
gi|187727678|gb|ACD28843.1| Sel1 domain protein repeat-containing protein [Ralstonia pickettii
12J]
gi|348613881|gb|EGY63450.1| hypothetical protein HMPREF0989_03031 [Ralstonia sp. 5_2_56FAA]
Length = 248
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EE 183
A RG A+ + ++E + A + +AA G+ QFN + ++ +E
Sbjct: 36 AVRGDADALTQIAIAHYEKNDFGHAFDEFAEAAQRGNRLAQFNYAMMLMRGEGTVARPDE 95
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
AVK L +A+ AQ+ RG V +L+EA +WY RAA GG+V A + Y
Sbjct: 96 AVKWLRRAADNQMTHAQFAYGELFERGELVPRSLEEANKWYERAAAGGHVEAQRALATDY 155
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
G G+P + +A W K+AA+ G +Q
Sbjct: 156 FTGRGVPRDYGRAFSWYKKAAEGGDAPSQ 184
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQF 173
+ + A D F + A RG+ LA + +M + + + A+ R+AA QF
Sbjct: 54 KNDFGHAFDEFAEAAQRGNRLAQFNYAMMLMRGEGTVARPDEAVKWLRRAADNQMTHAQF 113
Query: 174 NLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G + EEA K +A+ GHV AQ LA GRGV + A WY
Sbjct: 114 AYGELFERGELVPRSLEEANKWYERAAAGGHVEAQRALATDYFTGRGVPRDYGRAFSWYK 173
Query: 226 RAAEGGYVRAMYNTSLCYSFGEG--LPLSHRQARKWMKRAADCG 267
+AAEGG + Y Y GE +P QA+KW RAA G
Sbjct: 174 KAAEGGDAPSQYIVGSYYERGEPGVVPQDIEQAKKWYGRAAAQG 217
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Query: 164 AVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
AV GD + I++ ++ A +A+ G+ AQ+ A+ L RG G E
Sbjct: 36 AVRGDADALTQIAIAHYEKNDFGHAFDEFAEAAQRGNRLAQFNYAMMLMRGEGTVARPDE 95
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A +W RAA+ A + + GE +P S +A KW +RAA GH +AQ
Sbjct: 96 AVKWLRRAADNQMTHAQFAYGELFERGELVPRSLEEANKWYERAAAGGHVEAQRALATDY 155
Query: 280 FT 281
FT
Sbjct: 156 FT 157
>gi|420345856|ref|ZP_14847285.1| sel1 repeat family protein [Shigella boydii 965-58]
gi|391275908|gb|EIQ34691.1| sel1 repeat family protein [Shigella boydii 965-58]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAIVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL------GISYLQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLTAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E AI Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAIVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N A WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLTAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS------LYR 161
G +++G GV K+ A + + A +G + A + +Y D K A + Y
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLY--EDGKGVAQNETLTAFWYL 196
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGV 213
++A G+ QF + Y E V Y+ A+ G V A + G+GV
Sbjct: 197 KSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGV 256
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ + Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 257 EKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 119
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
+V+ ++A +G + A + + + + ++D A+
Sbjct: 120 IVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|300951144|ref|ZP_07165008.1| Sel1 repeat protein [Escherichia coli MS 116-1]
gi|300959217|ref|ZP_07171294.1| Sel1 repeat protein [Escherichia coli MS 175-1]
gi|301643940|ref|ZP_07243967.1| Sel1 repeat protein [Escherichia coli MS 146-1]
gi|331641147|ref|ZP_08342282.1| putative TPR repeat protein [Escherichia coli H736]
gi|386703826|ref|YP_006167673.1| hypothetical protein P12B_c0626 [Escherichia coli P12b]
gi|415776957|ref|ZP_11488209.1| uncharacterized protein ybeQ [Escherichia coli 3431]
gi|417617038|ref|ZP_12267470.1| hypothetical protein ECG581_0833 [Escherichia coli G58-1]
gi|418959063|ref|ZP_13510965.1| Sel1 repeat protein [Escherichia coli J53]
gi|1778562|gb|AAB40845.1| hypothetical protein [Escherichia coli]
gi|300314178|gb|EFJ63962.1| Sel1 repeat protein [Escherichia coli MS 175-1]
gi|300449573|gb|EFK13193.1| Sel1 repeat protein [Escherichia coli MS 116-1]
gi|301077710|gb|EFK92516.1| Sel1 repeat protein [Escherichia coli MS 146-1]
gi|315616437|gb|EFU97054.1| uncharacterized protein ybeQ [Escherichia coli 3431]
gi|331037945|gb|EGI10165.1| putative TPR repeat protein [Escherichia coli H736]
gi|345380912|gb|EGX12804.1| hypothetical protein ECG581_0833 [Escherichia coli G58-1]
gi|383101994|gb|AFG39503.1| hypothetical protein P12B_c0626 [Escherichia coli P12b]
gi|384378092|gb|EIE35981.1| Sel1 repeat protein [Escherichia coli J53]
Length = 327
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G+++ + K+ ++A+ K A +G T A G W +D+ EA A+ Y+
Sbjct: 71 GQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALG---WTLDRGEAPNYKEAVVWYQI 127
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 187
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 GQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G++ + A +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + K A Y ++
Sbjct: 141 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKS 200
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 201 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 260
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 261 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 301
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 12 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 63
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE---MMKAV 289
A Y+ Y+ + + QA W+K+AA GH A G L GE +AV
Sbjct: 64 CEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTL-DRGEAPNYKEAV 122
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
V+ ++A +G + A + + + + ++D A+
Sbjct: 123 VWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 156
>gi|421890976|ref|ZP_16321807.1| conserved hypothetical protein (modular protein) [Ralstonia
solanacearum K60-1]
gi|378963649|emb|CCF98555.1| conserved hypothetical protein (modular protein) [Ralstonia
solanacearum K60-1]
Length = 512
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE------MDKKEAAISLYR 161
G+ G GV KN A++ KGA G A +D G +Y E D + AA+ +Y+
Sbjct: 244 GRLHNKGLGVPKNWSLAVEWLQKGADAGDYTAFIDLGTLYAEGGDGTKPDGERAAL-MYK 302
Query: 162 QAAVLGDPAGQFNLGISYL------QEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGV 213
+AA GD G LG YL Q++AV + +A+ AG+ AQ + GRG
Sbjct: 303 KAASAGDAGGWQGLGWMYLNGKGVAQDDAVAYGWYMKAAQAGYPAAQVMVGRMNVMGRGT 362
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
N+++ W R AE G Y +G L + +W+ RAA G AQ
Sbjct: 363 AKNVKDGTAWLRRGAEAGDAEGQTILGRIYLWGTLLGRDDAEGIRWLSRAAIAGTADAQY 422
Query: 274 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329
+ G + ++ + V ++ +A + E+A ++++ Q+S R + W
Sbjct: 423 WLAEAYLSGEHVKQDIPRGVAWMWIAAKGNESAKSRMQHLEF-QVSLEQFGRGIRAAARW 481
Query: 330 RA 331
RA
Sbjct: 482 RA 483
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ AV L A+ +G A+ L GRGV + +A WY RAA+
Sbjct: 180 GVPLDSVRAVALYRDAAQSGLSAAEVALGAAYETGRGVPTDYTQAMAWYRRAADHQLGPG 239
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
M ++ G G+P + A +W+++ AD G A ++ G L+ EG
Sbjct: 240 MSAIGRLHNKGLGVPKNWSLAVEWLQKGADAGDYTAFIDLGT-LYAEG 286
>gi|422765185|ref|ZP_16818912.1| Sel1 [Escherichia coli E1520]
gi|323938406|gb|EGB34660.1| Sel1 [Escherichia coli E1520]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G+++ + K+ ++A+ K A +G T A G W +D+ EA A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALG---WTLDRGEAPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G++ + A +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + K A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE---MMKAV 289
A Y+ Y+ + + QA W+K+AA GH A G L GE +AV
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTL-DRGEAPNYKEAV 120
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
V+ ++A +G + A + + + + ++D A+
Sbjct: 121 VWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|323455918|gb|EGB11786.1| hypothetical protein AURANDRAFT_20969 [Aureococcus anophagefferens]
Length = 309
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPA 170
GV K+ KA + + G AM G +Y ++DKK+A LYR AA GD
Sbjct: 135 GVVKSEKKAAKIYRRAVELGDVGAMRILGTLYQNGSGVKLDKKKAE-RLYRMAADRGDAL 193
Query: 171 GQFNLGISYLQEEAVKLLYQASI----AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
Q+NLG E+ + ++ S+ G A+ L + GRG + ++EA R+
Sbjct: 194 AQYNLGALLYSEQKFEDAFRYSVLAADQGFAEAENNLGVFYRDGRGTEQKIEEAFRYLTL 253
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
AA G + +CY GEG + +AR W +RAA G KA
Sbjct: 254 AANQGCTNGEFGLGICYRNGEGTEVDLGKARYWFERAAAKGDEKA 298
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 106/238 (44%), Gaps = 26/238 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EAMV L G+ ++HG GV+ + KA + A RG+ A + G++ +K E A
Sbjct: 51 EAMVFL--GELYEHGNGVKLDKKKAERLWRMAADRGNATAQCNLGVLLHSEEKFEEAFRY 108
Query: 160 YRQAAVLGDPAGQFNLGISYL----------QEEAVKLLYQASIAGHVRAQYQLALCLHR 209
+ AA G AG+ NLGI +++A K+ +A G V A L
Sbjct: 109 FALAADQGLTAGELNLGICVYRNGYFGVVKSEKKAAKIYRRAVELGDVGAMRILGTLYQN 168
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYN-TSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GV + ++A R Y AA+ G A YN +L YS A ++ AAD
Sbjct: 169 GSGVKLDKKKAERLYRMAADRGDALAQYNLGALLYS-----EQKFEDAFRYSVLAAD--Q 221
Query: 269 GKAQLEHGLGLF------TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
G A+ E+ LG+F TE ++ +A YL LA G T + + + T D
Sbjct: 222 GFAEAENNLGVFYRDGRGTEQKIEEAFRYLTLAANQGCTNGEFGLGICYRNGEGTEVD 279
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY 160
AM +L G +++G GV+ + KA + A RG LA + G + + K E A
Sbjct: 158 AMRIL--GTLYQNGSGVKLDKKKAERLYRMAADRGDALAQYNLGALLYSEQKFEDAFRYS 215
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
AA G + NLG+ Y EEA + L A+ G ++ L +C G G
Sbjct: 216 VLAADQGFAEAENNLGVFYRDGRGTEQKIEEAFRYLTLAANQGCTNGEFGLGICYRNGEG 275
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYN 238
+ +L +A W+ RAA G +A+ N
Sbjct: 276 TEVDLGKARYWFERAAAKGDEKAIEN 301
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
++AA+ + RA E G V AM Y G G+ L ++A + + AAD G+ AQ G+
Sbjct: 35 KKAAKIWKRAVELGSVEAMVFLGELYEHGNGVKLDKKKAERLWRMAADRGNATAQCNLGV 94
Query: 278 GLFTEGEMMKAVVYLELATRAGETAAD 304
L +E + +A Y LA G TA +
Sbjct: 95 LLHSEEKFEEAFRYFALAADQGLTAGE 121
>gi|212709556|ref|ZP_03317684.1| hypothetical protein PROVALCAL_00598 [Providencia alcalifaciens DSM
30120]
gi|212687894|gb|EEB47422.1| hypothetical protein PROVALCAL_00598 [Providencia alcalifaciens DSM
30120]
Length = 353
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCL 207
A + ++A LG Q +LG+ YL + A+K L A+ G V AQ+ LAL
Sbjct: 212 AFQYFTRSAELGFSPAQNSLGMLYLAGQGTKRDTVSAIKWLTLAAEQGEVSAQFNLALIY 271
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
RG G+ N +A +W+++AA A Y + CY +G G+P + +A W + AA G
Sbjct: 272 ARGDGITANQAKACQWFIKAANQNSRDAQYASGACYQYGMGVPQNDNKALSWYRLAAKQG 331
Query: 268 HGKAQ 272
+AQ
Sbjct: 332 DERAQ 336
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQ L + G+G + A +W AAE G V A +N +L Y+ G+G+ +
Sbjct: 223 GFSPAQNSLGMLYLAGQGTKRDTVSAIKWLTLAAEQGEVSAQFNLALIYARGDGITANQA 282
Query: 255 QARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 310
+A +W +AA+ AQ G G+ KA+ + LA + G+ A K VI
Sbjct: 283 KACQWFIKAANQNSRDAQYASGACYQYGMGVPQNDNKALSWYRLAAKQGDERAQ--KKVI 340
Query: 311 L 311
+
Sbjct: 341 I 341
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 186 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245
K L + + +G AQ+ LA+ ++ G L AA WY +A + +A N +L Y
Sbjct: 36 KTLTELAHSGQAEAQFNLAM-FYQSHG---QLDNAAYWYKLSASQQFTKAQINLALMYQQ 91
Query: 246 GEGLPLSHRQARKWMKRAADCGHGKAQL 273
G G+ + ++ +WM+ AA G Q+
Sbjct: 92 GVGIGKNEKEMLRWMEAAAKAGDPIGQM 119
>gi|194745849|ref|XP_001955397.1| GF18742 [Drosophila ananassae]
gi|190628434|gb|EDV43958.1| GF18742 [Drosophila ananassae]
Length = 804
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ +++ KAL+ F + A G+ + G +Y E + E A + +A+
Sbjct: 337 YQGGKATQQDHQKALEYFTQAANAGNAVGFAFLGKLYLEGSDQIKADNETAFKYFTRASE 396
Query: 166 LGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+GDP GQ LG+ YL+ +A+ QA+ V Q QL G GV +
Sbjct: 397 MGDPVGQSGLGLMYLKGLGVPKDTIKALSYFTQAADQNWVDGQLQLGNMYFTGNGVKTDY 456
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A +++ A G+V A YN + +++G G+ S A ++ K ++ G ++L H
Sbjct: 457 KLALKYFNLATHSGHVLAYYNLGVMHAYGLGMLRSCPAAVEFFKTVSERGRWSSRLMHAY 516
Query: 278 GLFTEGEMMKAVVYLELATRAGETAA 303
+ + + +A + L G A
Sbjct: 517 SDYKKNRIDEAYMQYSLMAEVGYEVA 542
>gi|347539542|ref|YP_004846967.1| Sel1 domain containing protein repeat-containing protein
[Pseudogulbenkiania sp. NH8B]
gi|345642720|dbj|BAK76553.1| Sel1 domain protein repeat-containing protein [Pseudogulbenkiania
sp. NH8B]
Length = 210
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 159 LYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRG 210
L+ + A G+P +FNL G+S ++++++LL +++ G RAQY + L G
Sbjct: 41 LFEEGARAGEPVAEFNLAMMYWHGQGVSANRDKSLELLRKSAGHGLSRAQYAMGLLYENG 100
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GV + EA RW+ AA GY A + Y G G+ + QA KW K AA+ G
Sbjct: 101 DGVPRSQPEATRWFDLAARQGYRDAQVSLGTQYYLGRGVMQDYLQAAKWYKAAAEQGDVG 160
Query: 271 AQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
AQ EHG G+ + +A+ + A R G+ AA
Sbjct: 161 AQYLLASLYEHGDGVAQ--NLREAIRWYVAAARQGDVAA 197
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ HG+GV N DK+L+ K A G + A GL+Y D
Sbjct: 61 YWHGQGVSANRDKSLELLRKSAGHGLSRAQYAMGLLYENGD------------------- 101
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
G+ Q EA + A+ G+ AQ L + GRGV + +AA+WY AAE
Sbjct: 102 -----GVPRSQPEATRWFDLAARQGYRDAQVSLGTQYYLGRGVMQDYLQAAKWYKAAAEQ 156
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
G V A Y + Y G+G+ + R+A +W AA G A L+
Sbjct: 157 GDVGAQYLLASLYEHGDGVAQNLREAIRWYVAAARQGDVAASLK 200
>gi|357633782|ref|ZP_09131660.1| hypothetical protein DFW101_1661 [Desulfovibrio sp. FW1012B]
gi|357582336|gb|EHJ47669.1| hypothetical protein DFW101_1661 [Desulfovibrio sp. FW1012B]
Length = 692
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQ-ASIAGHVRAQYQLALC 206
A++ YR+AA G+ F LG S L + A + Y+ A+ AG RAQ+ L L
Sbjct: 448 AMAFYREAAEAGNVEAGFALG-SLLSKGLAGPPDFVAARQWYEKAATAGDPRAQFNLGLM 506
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G+G + QEA RW L AA+ G A N + G G P R+A +W + AA
Sbjct: 507 FLTGKGGPASDQEALRWLLEAAKNGDANARCNVASLTLTGRGTPADAREAFRWYRLAA-- 564
Query: 267 GHGKAQLEHGL-GLFTEGEMMK-----AVVYLELATRAGETA-----ADHVKNVILQQLS 315
G G AQ + L G + EG+++ A+ +L LA+RA + A K V+ ++L+
Sbjct: 565 GQGFAQAQAMLAGFYYEGKVVPRDFETALFWLTLASRAPGSDPLLLRAGKAKAVLEKRLA 624
Query: 316 ATSRDR 321
RDR
Sbjct: 625 PEQRDR 630
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 183 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 242
+A+ +A+ AG+V A + L L +G + A +WY +AA G RA +N L
Sbjct: 447 KAMAFYREAAEAGNVEAGFALGSLLSKGLAGPPDFVAARQWYEKAATAGDPRAQFNLGLM 506
Query: 243 YSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ G+G P S ++A +W+ AA G A+
Sbjct: 507 FLTGKGGPASDQEALRWLLEAAKNGDANAR 536
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 97/270 (35%), Gaps = 78/270 (28%)
Query: 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKAL 125
+L K AA+ + P R G + GR ++L +AL
Sbjct: 54 LPLLEKAAANGSAPSSH-----------------------RLGLVLEAGRDAPEDLPRAL 90
Query: 126 DSFLKGAARGSTLAMVDAGLMYWEMDKKE-AAISLYRQAAVLGDPAGQFNLGISYL---- 180
F A RG AMV AG + ++ + AA+ YR+AA GD A LGI
Sbjct: 91 ALFTAAAGRGHVPAMVRAGALARKVAGDDAAALGWYRRAADRGDTAAMAELGIMLFTGQG 150
Query: 181 --------------------------------------------QEEAVKLLYQASIAGH 196
EA L QA AG
Sbjct: 151 GTADPGAGMAWLRRAATAGNAQAATALGQALLALAEAGNAANGSPAEAAALFRQAGEAGD 210
Query: 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
AQ +LA G GV N EAAR +AA+ GY A + L Y G+G+ +A
Sbjct: 211 PEAQNRLADLYASGTGVARNPAEAARLRRQAADAGYAPAAFALGLMYLSGQGVSAYPLEA 270
Query: 257 RKWMKRAADCGHGKAQL------EHGLGLF 280
+ +RAA GH A L + GLG+F
Sbjct: 271 ARLFERAAGAGHVAAMLRLADMYQAGLGVF 300
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 157 ISLYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
+L QAA GDP + + G+S EA + A+ AG A+ LA
Sbjct: 377 TALLSQAAWAGDPEAMYAMALLHLAGKGVSGNPAEAFRWCRLAAEAGLPEAKALLAALSE 436
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
NL +A +Y AAE G V A + S G P AR+W ++AA G
Sbjct: 437 EEFPSAANLAKAMAFYREAAEAGNVEAGFALGSLLSKGLAGPPDFVAARQWYEKAATAGD 496
Query: 269 GKAQLEHGLGLFT 281
+AQ GL T
Sbjct: 497 PRAQFNLGLMFLT 509
>gi|224825307|ref|ZP_03698412.1| Sel1 domain protein repeat-containing protein [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602228|gb|EEG08406.1| Sel1 domain protein repeat-containing protein [Pseudogulbenkiania
ferrooxidans 2002]
Length = 210
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 159 LYRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRG 210
L+ + A G+P +FNL G+S ++++++LL +++ G RAQY + L G
Sbjct: 41 LFEEGARAGEPVAEFNLAMMYWHGQGVSANRDKSLELLRKSAGHGLSRAQYAMGLLYENG 100
Query: 211 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 270
GV + EA RW+ AA GY A + Y G G+ + QA KW K AA+ G
Sbjct: 101 DGVPRSQPEATRWFDLAARQGYRDAQVSLGTQYYLGRGVMQDYLQAAKWYKAAAEQGDVG 160
Query: 271 AQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAA 303
AQ EHG G+ + +A+ + A R G+ AA
Sbjct: 161 AQYLLASLYEHGDGVAQ--NLREAIRWYVAAARQGDVAA 197
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ HG+GV N DK+L+ K A G + A GL+Y D
Sbjct: 61 YWHGQGVSANRDKSLELLRKSAGHGLSRAQYAMGLLYENGD------------------- 101
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
G+ Q EA + A+ G+ AQ L + GRGV + +AA+WY AAE
Sbjct: 102 -----GVPRSQPEATRWFDLAARQGYRDAQVSLGTQYYLGRGVMQDYLQAAKWYKAAAEQ 156
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
G V A Y + Y G+G+ + R+A +W AA G A L+
Sbjct: 157 GDVGAQYLLASLYEHGDGVAQNLREAIRWYVAAARQGDVAASLK 200
>gi|422791431|ref|ZP_16844134.1| Sel1 [Escherichia coli TA007]
gi|323972099|gb|EGB67313.1| Sel1 [Escherichia coli TA007]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G+++ + K+ ++A+ K A +G T A G W +D+ EA A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALG---WTLDRGEAPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G++ + A +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYRHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + K A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYRHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE---MMKAV 289
A Y+ Y+ + + QA W+K+AA GH A G L GE +AV
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTL-DRGEAPNYKEAV 120
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
V+ ++A +G + A + + + + ++D A+
Sbjct: 121 VWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|90111158|ref|NP_415177.4| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|170020999|ref|YP_001725953.1| Sel1 domain-containing protein [Escherichia coli ATCC 8739]
gi|170080223|ref|YP_001729543.1| hypothetical protein ECDH10B_0605 [Escherichia coli str. K-12
substr. DH10B]
gi|170080324|ref|YP_001729644.1| hypothetical protein ECDH10B_0713 [Escherichia coli str. K-12
substr. DH10B]
gi|188493139|ref|ZP_03000409.1| hypothetical protein Ec53638_0670 [Escherichia coli 53638]
gi|218694084|ref|YP_002401751.1| hypothetical protein EC55989_0636 [Escherichia coli 55989]
gi|238899921|ref|YP_002925717.1| hypothetical protein BWG_0515 [Escherichia coli BW2952]
gi|301028875|ref|ZP_07192049.1| Sel1 repeat protein [Escherichia coli MS 196-1]
gi|386279667|ref|ZP_10057345.1| hypothetical protein ESBG_02144 [Escherichia sp. 4_1_40B]
gi|386596500|ref|YP_006092900.1| Sel1 domain-containing protein repeat-containing protein
[Escherichia coli DH1]
gi|386612822|ref|YP_006132488.1| hypothetical protein UMNK88_680 [Escherichia coli UMNK88]
gi|387611147|ref|YP_006114263.1| hypothetical protein ETEC_0673 [Escherichia coli ETEC H10407]
gi|387620387|ref|YP_006128014.1| hypothetical protein ECDH1ME8569_0613 [Escherichia coli DH1]
gi|388476747|ref|YP_488935.1| hypothetical protein Y75_p0634 [Escherichia coli str. K-12 substr.
W3110]
gi|404373982|ref|ZP_10979206.1| hypothetical protein ESCG_02671 [Escherichia sp. 1_1_43]
gi|407468072|ref|YP_006785486.1| hypothetical protein O3O_06925 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483197|ref|YP_006780346.1| hypothetical protein O3K_18370 [Escherichia coli O104:H4 str.
2011C-3493]
gi|410483750|ref|YP_006771296.1| hypothetical protein O3M_18350 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|417263740|ref|ZP_12051144.1| Sel1 repeat protein [Escherichia coli 2.3916]
gi|417274877|ref|ZP_12062217.1| Sel1 repeat protein [Escherichia coli 2.4168]
gi|417275167|ref|ZP_12062504.1| Sel1 repeat protein [Escherichia coli 3.2303]
gi|417289847|ref|ZP_12077130.1| Sel1 repeat protein [Escherichia coli B41]
gi|417611665|ref|ZP_12262139.1| hypothetical protein ECSTECEH250_0706 [Escherichia coli STEC_EH250]
gi|417633114|ref|ZP_12283334.1| hypothetical protein ECSTECS1191_1009 [Escherichia coli STEC_S1191]
gi|417803976|ref|ZP_12451011.1| hypothetical protein HUSEC_03358 [Escherichia coli O104:H4 str.
LB226692]
gi|417831730|ref|ZP_12478252.1| hypothetical protein HUSEC41_03170 [Escherichia coli O104:H4 str.
01-09591]
gi|417863879|ref|ZP_12508926.1| hypothetical protein C22711_0812 [Escherichia coli O104:H4 str.
C227-11]
gi|417947249|ref|ZP_12590444.1| hypothetical protein IAE_19579 [Escherichia coli XH140A]
gi|417977513|ref|ZP_12618296.1| hypothetical protein IAM_14297 [Escherichia coli XH001]
gi|418301507|ref|ZP_12913301.1| uncharacterized protein ybeQ [Escherichia coli UMNF18]
gi|419141169|ref|ZP_13685924.1| sel1 repeat family protein [Escherichia coli DEC6A]
gi|419146760|ref|ZP_13691456.1| sel1 repeat family protein [Escherichia coli DEC6B]
gi|419152520|ref|ZP_13697106.1| sel1 repeat family protein [Escherichia coli DEC6C]
gi|419157966|ref|ZP_13702489.1| sel1 repeat family protein [Escherichia coli DEC6D]
gi|419162892|ref|ZP_13707371.1| sel1 repeat family protein [Escherichia coli DEC6E]
gi|419174051|ref|ZP_13717906.1| sel1 repeat family protein [Escherichia coli DEC7B]
gi|419812444|ref|ZP_14337310.1| hypothetical protein UWO_18104 [Escherichia coli O32:H37 str. P4]
gi|419941193|ref|ZP_14457891.1| hypothetical protein EC75_17817 [Escherichia coli 75]
gi|421777004|ref|ZP_16213604.1| Sel1 repeat protein [Escherichia coli AD30]
gi|422769846|ref|ZP_16823537.1| Sel1 [Escherichia coli E482]
gi|422816629|ref|ZP_16864844.1| hypothetical protein ESMG_01156 [Escherichia coli M919]
gi|422991335|ref|ZP_16982106.1| hypothetical protein EUAG_00928 [Escherichia coli O104:H4 str.
C227-11]
gi|422993275|ref|ZP_16984039.1| hypothetical protein EUBG_00926 [Escherichia coli O104:H4 str.
C236-11]
gi|422998485|ref|ZP_16989241.1| hypothetical protein EUEG_00913 [Escherichia coli O104:H4 str.
09-7901]
gi|423006949|ref|ZP_16997692.1| hypothetical protein EUDG_03948 [Escherichia coli O104:H4 str.
04-8351]
gi|423008592|ref|ZP_16999330.1| hypothetical protein EUFG_00929 [Escherichia coli O104:H4 str.
11-3677]
gi|423022781|ref|ZP_17013484.1| hypothetical protein EUHG_00934 [Escherichia coli O104:H4 str.
11-4404]
gi|423027932|ref|ZP_17018625.1| hypothetical protein EUIG_00936 [Escherichia coli O104:H4 str.
11-4522]
gi|423033767|ref|ZP_17024451.1| hypothetical protein EUJG_02826 [Escherichia coli O104:H4 str.
11-4623]
gi|423036634|ref|ZP_17027308.1| hypothetical protein EUKG_00911 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423041753|ref|ZP_17032420.1| hypothetical protein EULG_00928 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423048441|ref|ZP_17039098.1| hypothetical protein EUMG_00929 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423052024|ref|ZP_17040832.1| hypothetical protein EUNG_00430 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423058990|ref|ZP_17047786.1| hypothetical protein EUOG_00930 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423701397|ref|ZP_17675856.1| hypothetical protein ESSG_00928 [Escherichia coli H730]
gi|425113991|ref|ZP_18515821.1| hypothetical protein EC80566_0645 [Escherichia coli 8.0566]
gi|425118754|ref|ZP_18520483.1| sel1 repeat family protein [Escherichia coli 8.0569]
gi|425271325|ref|ZP_18662832.1| hypothetical protein ECTW15901_0601 [Escherichia coli TW15901]
gi|425282002|ref|ZP_18673117.1| hypothetical protein ECTW00353_0650 [Escherichia coli TW00353]
gi|429722819|ref|ZP_19257714.1| hypothetical protein MO3_00891 [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429774916|ref|ZP_19306919.1| hypothetical protein C212_04559 [Escherichia coli O104:H4 str.
11-02030]
gi|429780181|ref|ZP_19312133.1| hypothetical protein C213_04562 [Escherichia coli O104:H4 str.
11-02033-1]
gi|429784231|ref|ZP_19316144.1| hypothetical protein C214_04547 [Escherichia coli O104:H4 str.
11-02092]
gi|429789569|ref|ZP_19321444.1| hypothetical protein C215_04526 [Escherichia coli O104:H4 str.
11-02093]
gi|429795799|ref|ZP_19327625.1| hypothetical protein C216_04562 [Escherichia coli O104:H4 str.
11-02281]
gi|429801725|ref|ZP_19333503.1| hypothetical protein C217_04554 [Escherichia coli O104:H4 str.
11-02318]
gi|429805357|ref|ZP_19337104.1| hypothetical protein C218_04560 [Escherichia coli O104:H4 str.
11-02913]
gi|429810168|ref|ZP_19341870.1| hypothetical protein C219_04564 [Escherichia coli O104:H4 str.
11-03439]
gi|429815928|ref|ZP_19347587.1| hypothetical protein C220_04554 [Escherichia coli O104:H4 str.
11-04080]
gi|429821516|ref|ZP_19353129.1| hypothetical protein C221_04555 [Escherichia coli O104:H4 str.
11-03943]
gi|429907189|ref|ZP_19373158.1| hypothetical protein MO5_03858 [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429911385|ref|ZP_19377341.1| hypothetical protein MO7_04165 [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429917224|ref|ZP_19383164.1| hypothetical protein O7C_04178 [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429922262|ref|ZP_19388183.1| hypothetical protein O7E_04185 [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429928078|ref|ZP_19393984.1| hypothetical protein O7G_04999 [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429932008|ref|ZP_19397903.1| hypothetical protein O7I_03862 [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429933612|ref|ZP_19399502.1| hypothetical protein O7K_00400 [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429939268|ref|ZP_19405142.1| hypothetical protein O7M_00944 [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429946911|ref|ZP_19412766.1| hypothetical protein O7O_03490 [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429949543|ref|ZP_19415391.1| hypothetical protein S7Y_00939 [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429957825|ref|ZP_19423654.1| hypothetical protein S91_04276 [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432368597|ref|ZP_19611702.1| hypothetical protein WCM_02541 [Escherichia coli KTE10]
gi|432562527|ref|ZP_19799154.1| hypothetical protein A1SA_01184 [Escherichia coli KTE51]
gi|432626199|ref|ZP_19862184.1| hypothetical protein A1UQ_01029 [Escherichia coli KTE77]
gi|432635929|ref|ZP_19871815.1| hypothetical protein A1UY_01277 [Escherichia coli KTE81]
gi|432659882|ref|ZP_19895537.1| hypothetical protein A1WY_01288 [Escherichia coli KTE111]
gi|432684457|ref|ZP_19919775.1| hypothetical protein A31A_01311 [Escherichia coli KTE156]
gi|432690545|ref|ZP_19925791.1| hypothetical protein A31G_02762 [Escherichia coli KTE161]
gi|432703190|ref|ZP_19938315.1| hypothetical protein A31Q_01065 [Escherichia coli KTE171]
gi|432736157|ref|ZP_19970932.1| hypothetical protein WGE_01393 [Escherichia coli KTE42]
gi|432763982|ref|ZP_19998432.1| hypothetical protein A1S5_01531 [Escherichia coli KTE48]
gi|432880113|ref|ZP_20096933.1| hypothetical protein A317_03200 [Escherichia coli KTE154]
gi|432953779|ref|ZP_20146049.1| hypothetical protein A155_01314 [Escherichia coli KTE197]
gi|433046780|ref|ZP_20234199.1| hypothetical protein WII_00754 [Escherichia coli KTE120]
gi|433090981|ref|ZP_20277283.1| hypothetical protein WK1_00621 [Escherichia coli KTE138]
gi|442595667|ref|ZP_21013510.1| FIG00639187: hypothetical protein [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|450240125|ref|ZP_21899257.1| hypothetical protein C201_02773 [Escherichia coli S17]
gi|18271675|sp|P77234.2|YBEQ_ECOLI RecName: Full=Uncharacterized protein YbeQ
gi|85674730|dbj|BAA35291.2| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|87081769|gb|AAC73745.2| hypothetical protein b0644 [Escherichia coli str. K-12 substr.
MG1655]
gi|169755927|gb|ACA78626.1| Sel1 domain protein repeat-containing protein [Escherichia coli
ATCC 8739]
gi|169888058|gb|ACB01765.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|169888159|gb|ACB01866.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|188488338|gb|EDU63441.1| hypothetical protein Ec53638_0670 [Escherichia coli 53638]
gi|218350816|emb|CAU96508.1| conserved hypothetical protein [Escherichia coli 55989]
gi|238860282|gb|ACR62280.1| conserved protein [Escherichia coli BW2952]
gi|260450189|gb|ACX40611.1| Sel1 domain protein repeat-containing protein [Escherichia coli
DH1]
gi|299878146|gb|EFI86357.1| Sel1 repeat protein [Escherichia coli MS 196-1]
gi|309700883|emb|CBJ00180.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
gi|315135310|dbj|BAJ42469.1| hypothetical protein ECDH1ME8569_0613 [Escherichia coli DH1]
gi|323943059|gb|EGB39218.1| Sel1 [Escherichia coli E482]
gi|332341991|gb|AEE55325.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|339413605|gb|AEJ55277.1| uncharacterized protein ybeQ [Escherichia coli UMNF18]
gi|340735882|gb|EGR64938.1| hypothetical protein HUSEC41_03170 [Escherichia coli O104:H4 str.
01-09591]
gi|340741685|gb|EGR75831.1| hypothetical protein HUSEC_03358 [Escherichia coli O104:H4 str.
LB226692]
gi|341917168|gb|EGT66784.1| hypothetical protein C22711_0812 [Escherichia coli O104:H4 str.
C227-11]
gi|342361018|gb|EGU25170.1| hypothetical protein IAE_19579 [Escherichia coli XH140A]
gi|344192789|gb|EGV46876.1| hypothetical protein IAM_14297 [Escherichia coli XH001]
gi|345366150|gb|EGW98248.1| hypothetical protein ECSTECEH250_0706 [Escherichia coli STEC_EH250]
gi|345390784|gb|EGX20581.1| hypothetical protein ECSTECS1191_1009 [Escherichia coli STEC_S1191]
gi|354858448|gb|EHF18899.1| hypothetical protein EUDG_03948 [Escherichia coli O104:H4 str.
04-8351]
gi|354858556|gb|EHF19006.1| hypothetical protein EUAG_00928 [Escherichia coli O104:H4 str.
C227-11]
gi|354864350|gb|EHF24779.1| hypothetical protein EUBG_00926 [Escherichia coli O104:H4 str.
C236-11]
gi|354877353|gb|EHF37713.1| hypothetical protein EUEG_00913 [Escherichia coli O104:H4 str.
09-7901]
gi|354879148|gb|EHF39489.1| hypothetical protein EUHG_00934 [Escherichia coli O104:H4 str.
11-4404]
gi|354883561|gb|EHF43880.1| hypothetical protein EUFG_00929 [Escherichia coli O104:H4 str.
11-3677]
gi|354885546|gb|EHF45843.1| hypothetical protein EUIG_00936 [Escherichia coli O104:H4 str.
11-4522]
gi|354888232|gb|EHF48493.1| hypothetical protein EUJG_02826 [Escherichia coli O104:H4 str.
11-4623]
gi|354901717|gb|EHF61844.1| hypothetical protein EUKG_00911 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354904533|gb|EHF64624.1| hypothetical protein EULG_00928 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354907190|gb|EHF67255.1| hypothetical protein EUMG_00929 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354918000|gb|EHF77961.1| hypothetical protein EUOG_00930 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354921975|gb|EHF81894.1| hypothetical protein EUNG_00430 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|359331361|dbj|BAL37808.1| conserved protein [Escherichia coli str. K-12 substr. MDS42]
gi|377999384|gb|EHV62467.1| sel1 repeat family protein [Escherichia coli DEC6A]
gi|378001688|gb|EHV64747.1| sel1 repeat family protein [Escherichia coli DEC6B]
gi|378003258|gb|EHV66303.1| sel1 repeat family protein [Escherichia coli DEC6C]
gi|378013406|gb|EHV76324.1| sel1 repeat family protein [Escherichia coli DEC6D]
gi|378016482|gb|EHV79363.1| sel1 repeat family protein [Escherichia coli DEC6E]
gi|378037369|gb|EHV99897.1| sel1 repeat family protein [Escherichia coli DEC7B]
gi|385154651|gb|EIF16661.1| hypothetical protein UWO_18104 [Escherichia coli O32:H37 str. P4]
gi|385540102|gb|EIF86929.1| hypothetical protein ESMG_01156 [Escherichia coli M919]
gi|385712751|gb|EIG49693.1| hypothetical protein ESSG_00928 [Escherichia coli H730]
gi|386123219|gb|EIG71818.1| hypothetical protein ESBG_02144 [Escherichia sp. 4_1_40B]
gi|386222628|gb|EII45047.1| Sel1 repeat protein [Escherichia coli 2.3916]
gi|386233305|gb|EII65290.1| Sel1 repeat protein [Escherichia coli 2.4168]
gi|386241820|gb|EII78733.1| Sel1 repeat protein [Escherichia coli 3.2303]
gi|386255885|gb|EIJ05573.1| Sel1 repeat protein [Escherichia coli B41]
gi|388401197|gb|EIL61856.1| hypothetical protein EC75_17817 [Escherichia coli 75]
gi|404292580|gb|EJZ49398.1| hypothetical protein ESCG_02671 [Escherichia sp. 1_1_43]
gi|406778912|gb|AFS58336.1| hypothetical protein O3M_18350 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055494|gb|AFS75545.1| hypothetical protein O3K_18370 [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064107|gb|AFS85154.1| hypothetical protein O3O_06925 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408198388|gb|EKI23618.1| hypothetical protein ECTW15901_0601 [Escherichia coli TW15901]
gi|408205770|gb|EKI30605.1| hypothetical protein ECTW00353_0650 [Escherichia coli TW00353]
gi|408457896|gb|EKJ81687.1| Sel1 repeat protein [Escherichia coli AD30]
gi|408572785|gb|EKK48670.1| hypothetical protein EC80566_0645 [Escherichia coli 8.0566]
gi|408573345|gb|EKK49201.1| sel1 repeat family protein [Escherichia coli 8.0569]
gi|429351732|gb|EKY88452.1| hypothetical protein C212_04559 [Escherichia coli O104:H4 str.
11-02030]
gi|429351865|gb|EKY88584.1| hypothetical protein C213_04562 [Escherichia coli O104:H4 str.
11-02033-1]
gi|429353193|gb|EKY89902.1| hypothetical protein C214_04547 [Escherichia coli O104:H4 str.
11-02092]
gi|429367106|gb|EKZ03707.1| hypothetical protein C215_04526 [Escherichia coli O104:H4 str.
11-02093]
gi|429368017|gb|EKZ04609.1| hypothetical protein C216_04562 [Escherichia coli O104:H4 str.
11-02281]
gi|429370512|gb|EKZ07078.1| hypothetical protein C217_04554 [Escherichia coli O104:H4 str.
11-02318]
gi|429382899|gb|EKZ19363.1| hypothetical protein C218_04560 [Escherichia coli O104:H4 str.
11-02913]
gi|429385132|gb|EKZ21586.1| hypothetical protein C221_04555 [Escherichia coli O104:H4 str.
11-03943]
gi|429385655|gb|EKZ22108.1| hypothetical protein C219_04564 [Escherichia coli O104:H4 str.
11-03439]
gi|429397348|gb|EKZ33695.1| hypothetical protein C220_04554 [Escherichia coli O104:H4 str.
11-04080]
gi|429398711|gb|EKZ35044.1| hypothetical protein MO3_00891 [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429398794|gb|EKZ35126.1| hypothetical protein MO5_03858 [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429409628|gb|EKZ45855.1| hypothetical protein O7C_04178 [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429411724|gb|EKZ47930.1| hypothetical protein O7G_04999 [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429418462|gb|EKZ54606.1| hypothetical protein O7I_03862 [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429428082|gb|EKZ64162.1| hypothetical protein O7M_00944 [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429429603|gb|EKZ65671.1| hypothetical protein O7K_00400 [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429435750|gb|EKZ71768.1| hypothetical protein O7E_04185 [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429439420|gb|EKZ75403.1| hypothetical protein S7Y_00939 [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429444891|gb|EKZ80836.1| hypothetical protein O7O_03490 [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429450470|gb|EKZ86365.1| hypothetical protein S91_04276 [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429456685|gb|EKZ92530.1| hypothetical protein MO7_04165 [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430889063|gb|ELC11734.1| hypothetical protein WCM_02541 [Escherichia coli KTE10]
gi|431099760|gb|ELE04780.1| hypothetical protein A1SA_01184 [Escherichia coli KTE51]
gi|431165334|gb|ELE65692.1| hypothetical protein A1UQ_01029 [Escherichia coli KTE77]
gi|431174211|gb|ELE74272.1| hypothetical protein A1UY_01277 [Escherichia coli KTE81]
gi|431203245|gb|ELF01921.1| hypothetical protein A1WY_01288 [Escherichia coli KTE111]
gi|431224875|gb|ELF22085.1| hypothetical protein A31A_01311 [Escherichia coli KTE156]
gi|431231033|gb|ELF26803.1| hypothetical protein A31G_02762 [Escherichia coli KTE161]
gi|431246850|gb|ELF41098.1| hypothetical protein A31Q_01065 [Escherichia coli KTE171]
gi|431286753|gb|ELF77577.1| hypothetical protein WGE_01393 [Escherichia coli KTE42]
gi|431313090|gb|ELG01069.1| hypothetical protein A1S5_01531 [Escherichia coli KTE48]
gi|431413737|gb|ELG96502.1| hypothetical protein A317_03200 [Escherichia coli KTE154]
gi|431470275|gb|ELH50198.1| hypothetical protein A155_01314 [Escherichia coli KTE197]
gi|431571913|gb|ELI44782.1| hypothetical protein WII_00754 [Escherichia coli KTE120]
gi|431614371|gb|ELI83526.1| hypothetical protein WK1_00621 [Escherichia coli KTE138]
gi|441604218|emb|CCP98644.1| FIG00639187: hypothetical protein [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|449324745|gb|EMD14669.1| hypothetical protein C201_02773 [Escherichia coli S17]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G+++ + K+ ++A+ K A +G T A G W +D+ EA A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALG---WTLDRGEAPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G++ + A +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + K A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE---MMKAV 289
A Y+ Y+ + + QA W+K+AA GH A G L GE +AV
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTL-DRGEAPNYKEAV 120
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
V+ ++A +G + A + + + + ++D A+
Sbjct: 121 VWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|303282483|ref|XP_003060533.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458004|gb|EEH55302.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 408
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKL 187
FLK AA+G+TLA + GL Y + LG+ + A +
Sbjct: 82 FLKAAAQGATLAEYNLGLFY------------------------DYGLGVEENKSTAAEF 117
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
+A+ GH RAQ + L+ R + + A +WY +AA GY +A YN + Y +G
Sbjct: 118 FLKAAKKGHDRAQCEFGYILYSERN---DYEGAMKWYQKAAAQGYAQAEYNIGILYFYGV 174
Query: 248 GLPLSHRQARKWMKRAA 264
G+ +AR+W +RAA
Sbjct: 175 GVERDEAKAREWFERAA 191
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A W+L+AA G A YN L Y +G G+ + A ++ +AA GH +AQ E G L
Sbjct: 78 AREWFLKAAAQGATLAEYNLGLFYDYGLGVEENKSTAAEFFLKAAKKGHDRAQCEFGYIL 137
Query: 280 FTE-GEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 322
++E + A+ + + A G A++ ++ RD A
Sbjct: 138 YSERNDYEGAMKWYQKAAAQGYAQAEYNIGILYFYGVGVERDEA 181
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG-LMYWEMDKKEAAISLYRQAAVLGDP 169
+ +G GV +N A + FLK A +G A + G ++Y E + E A+ Y++AA G
Sbjct: 101 YDYGLGVEENKSTAAEFFLKAAKKGHDRAQCEFGYILYSERNDYEGAMKWYQKAAAQGYA 160
Query: 170 AGQFNLGISYL 180
++N+GI Y
Sbjct: 161 QAEYNIGILYF 171
>gi|430002063|emb|CCF17843.1| conserved hypothetical protein. Peptidoglycan-binding domain 1
protein, Tetratricopeptide repeat domain [Rhizobium sp.]
Length = 1255
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA GDP F +G Y EA A+ G AQY+LA +G GV
Sbjct: 984 EAAESGDPLALFEIGARYTDGRGVATDLSEAANWYKLAADKGFAPAQYRLANLFEKGTGV 1043
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
++ +A +Y +AAE G AM+N ++ ++ G + A W K+AAD G +Q
Sbjct: 1044 TRDVDKAVTYYGQAAEAGNASAMHNLAVLHASGATGEPDYATAVDWFKKAADLGVSDSQF 1103
Query: 274 EHGLGLFTEG-----EMMKAVVYLELATRAGETAA----DHVKNVILQQLSATSRDRAML 324
+ L+ G +++++ + +A + G+ A D V + Q L +R A
Sbjct: 1104 NLAI-LYARGNGAPQDLVQSYKWFAIAAKGGDQDAAQKRDEVAKAMRQDLVQAARAAA-- 1160
Query: 325 VVDSWRAMP 333
DSW+A P
Sbjct: 1161 --DSWKAQP 1167
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 32/130 (24%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYR 161
R F+ G GV +++DKA+ + + A G+ AM + +++ E A+ ++
Sbjct: 1032 RLANLFEKGTGVTRDVDKAVTYYGQAAEAGNASAMHNLAVLHASGATGEPDYATAVDWFK 1091
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221
+AA LG QFNL I Y RG G +L ++
Sbjct: 1092 KAADLGVSDSQFNLAILYA----------------------------RGNGAPQDLVQSY 1123
Query: 222 RWYLRAAEGG 231
+W+ AA+GG
Sbjct: 1124 KWFAIAAKGG 1133
>gi|344341562|ref|ZP_08772480.1| Sel1 domain protein repeat-containing protein [Thiocapsa marina
5811]
gi|343798494|gb|EGV16450.1| Sel1 domain protein repeat-containing protein [Thiocapsa marina
5811]
Length = 414
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 132 AARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQ------ 181
A G L V GL Y + + E+ A+ YR+AA G+P GQ+ LGI Y
Sbjct: 56 AENGDALGQVALGLAYQNGKGVPRDESQAVQWYRKAAEQGNPVGQYLLGIMYAAGSGVPQ 115
Query: 182 --EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 239
+A +L +++ G+ A+Y L G GV + AA WY AAE G A
Sbjct: 116 DLSKAARLYNESAKQGNTFAKYLLGTMYEAGSGVRQSDGRAALWYAEAAEEGSSDAQRLL 175
Query: 240 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV-----VYLEL 294
+ Y G G+ QA KW+ +AA+ G +Q+ G E+ + ++ E
Sbjct: 176 GIMYGEGRGVEQDDTQAVKWLSKAAEQGDADSQVMLGACHLAGREVKQDFEVALNIFAEA 235
Query: 295 ATRAGE 300
ATR G+
Sbjct: 236 ATRNGQ 241
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 154 EAAISL--YRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQL 203
EAA L R A GD GQ LG++Y + +AV+ +A+ G+ QY L
Sbjct: 44 EAAFELRETRAKAENGDALGQVALGLAYQNGKGVPRDESQAVQWYRKAAEQGNPVGQYLL 103
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
+ G GV +L +AAR Y +A+ G A Y Y G G+ S +A W A
Sbjct: 104 GIMYAAGSGVPQDLSKAARLYNESAKQGNTFAKYLLGTMYEAGSGVRQSDGRAALWYAEA 163
Query: 264 ADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATRAGE 300
A+ G AQ + +G G E + +AV +L A G+
Sbjct: 164 AEEGSSDAQRLLGIMYGEGRGVEQDDTQAVKWLSKAAEQGD 204
>gi|418054406|ref|ZP_12692462.1| Sel1 domain protein repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
gi|353212031|gb|EHB77431.1| Sel1 domain protein repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
Length = 361
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
EA G+ + G GV+K+ KA D ++K + G A + E D+K
Sbjct: 108 EAQANTLIGRIYGEGLGVQKDEKKAYDYYMKASQLGDVQGAFAAAIALAEGRGVKKDRKM 167
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALC 206
AA L+ +AA+ G+ +NLG+ +L+ + A + + A+ G AQY LA
Sbjct: 168 AA-ELFEKAALTGNAEANYNLGLLFLKGDGKPQSPIRAFQHIRYAAEKGIPEAQYDLAEL 226
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
G G + N EAARW RAAE G A Y+ ++ G GL + MK AAD
Sbjct: 227 YRTGTGTEANALEAARWLSRAAEQGLTPAQYDYAVKLLQGFGLSKDESKIAVLMKAAADK 286
Query: 267 GHGKAQ 272
G AQ
Sbjct: 287 GVPGAQ 292
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 175 LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
LG+ +++A +AS G V+ + A+ L GRGV + + AA + +AA G
Sbjct: 123 LGVQKDEKKAYDYYMKASQLGDVQGAFAAAIALAEGRGVKKDRKMAAELFEKAALTGNAE 182
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVV 290
A YN L + G+G P S +A + ++ AA+ G +AQ + + G TE ++A
Sbjct: 183 ANYNLGLLFLKGDGKPQSPIRAFQHIRYAAEKGIPEAQYDLAELYRTGTGTEANALEAAR 242
Query: 291 YLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 326
+L A G T A + V L Q S+D + + V
Sbjct: 243 WLSRAAEQGLTPAQYDYAVKLLQGFGLSKDESKIAV 278
>gi|387607381|ref|YP_006096237.1| putative chaperone protein [Escherichia coli 042]
gi|432770725|ref|ZP_20005069.1| hypothetical protein A1S9_03523 [Escherichia coli KTE50]
gi|432961779|ref|ZP_20151569.1| hypothetical protein A15E_02487 [Escherichia coli KTE202]
gi|433063153|ref|ZP_20250086.1| hypothetical protein WIO_01973 [Escherichia coli KTE125]
gi|284921681|emb|CBG34753.1| putative chaperone protein [Escherichia coli 042]
gi|431315925|gb|ELG03824.1| hypothetical protein A1S9_03523 [Escherichia coli KTE50]
gi|431474735|gb|ELH54541.1| hypothetical protein A15E_02487 [Escherichia coli KTE202]
gi|431582987|gb|ELI54997.1| hypothetical protein WIO_01973 [Escherichia coli KTE125]
Length = 647
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A G+MY + + IS R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDAQYALGIMYRDGRGTDKNISEARKWFLLA 390
Query: 164 AVLGDPAGQFNLG-ISYL-------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ + Q+ + IS EEA++ A+ GH RAQY L G GV
Sbjct: 391 AKNGNASAQYEIARISRFAVEPLRNYEEALRWYLSAATQGHERAQYDLGQMYIHGIGVAR 450
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH---GKAQ 272
+ +A RW L++AE GY+ A Y+T+ YS E + +A W + A G G+A
Sbjct: 451 DKVQAHRWLLQSAEQGYLYAQYHTARLYSESESILQDQEKALYWFTKVAKNGTDGAGEAM 510
Query: 273 LEHGLGLFTEGE 284
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 32/204 (15%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR LRW G+ + HG GV ++ +A L+ A +G
Sbjct: 409 AVEPLRNYEEALRWYLSAATQGHERAQYDLGQMYIHGIGVARDKVQAHRWLLQSAEQGYL 468
Query: 138 LAMVDAGLMYWE----MDKKEAAISLYRQAAVLG-DPAGQ--FNLGISYLQE-------- 182
A +Y E + +E A+ + + A G D AG+ + LG YL
Sbjct: 469 YAQYHTARLYSESESILQDQEKALYWFTKVAKNGTDGAGEAMYELGKYYLTNNDDPENNA 528
Query: 183 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
EA++ + A+ G + A + LA + L+ + + A WY +AA G A + T+
Sbjct: 529 EAIQWITGAAQRGQIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLGSTEAQHQTAA 588
Query: 242 CYSFGEGLPLSHRQARKWMKRAAD 265
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G+ Y + A+ G+ A Y L + G V +L+ A W+ RAA+ + A
Sbjct: 303 GLFYYPSSVFQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDA 362
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
Y + Y G G + +ARKW AA G+ AQ E
Sbjct: 363 QYALGIMYRDGRGTDKNISEARKWFLLAAKNGNASAQYE 401
>gi|68249923|ref|YP_249035.1| hypothetical protein NTHI1571 [Haemophilus influenzae 86-028NP]
gi|68058122|gb|AAX88375.1| hypothetical protein NTHI1571 [Haemophilus influenzae 86-028NP]
Length = 183
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAG 195
GL +E + A L+ A GD QFNLG+ Y + EAVK +A+ G
Sbjct: 36 GLTAYEQSNYQTAFKLWLPLAEQGDANVQFNLGVMYAEGQGVKQDDFEAVKWYRKAAEQG 95
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
AQ L L GRGV + EA +W+ +AAE G+ A Y G+G+ ++
Sbjct: 96 DANAQAYLGLAYTEGRGVRQDYTEAVKWFRKAAEQGHANAQAILGFSYLLGKGVQVNKSL 155
Query: 256 ARKWMKRAADCG 267
A++W +A D G
Sbjct: 156 AKEWFGKACDNG 167
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 172 QFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
QF G++ ++ A KL + G Q+ L + G+GV + EA +WY +A
Sbjct: 32 QFQQGLTAYEQSNYQTAFKLWLPLAEQGDANVQFNLGVMYAEGQGVKQDDFEAVKWYRKA 91
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
AE G A L Y+ G G+ + +A KW ++AA+ GH AQ
Sbjct: 92 AEQGDANAQAYLGLAYTEGRGVRQDYTEAVKWFRKAAEQGHANAQ 136
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
N Q A + +L AE G +N + Y+ G+G+ +A KW ++AA+ G AQ
Sbjct: 44 NYQTAFKLWLPLAEQGDANVQFNLGVMYAEGQGVKQDDFEAVKWYRKAAEQGDANAQAYL 103
Query: 276 GLGLFTEG-----EMMKAVVYLELATRAGETAADHV 306
GL +TEG + +AV + A G A +
Sbjct: 104 GLA-YTEGRGVRQDYTEAVKWFRKAAEQGHANAQAI 138
>gi|340363639|ref|ZP_08685962.1| Sel1 repeat protein [Neisseria macacae ATCC 33926]
gi|339885318|gb|EGQ75047.1| Sel1 repeat protein [Neisseria macacae ATCC 33926]
Length = 191
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 14/158 (8%)
Query: 138 LAMVDAGLM--YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ---------EEAVK 186
LA++ G++ W D + +L Q+A G+ A QFNLG+ Y + EA K
Sbjct: 2 LALLSLGIVQAVWADDVPDLQKTL--QSARQGNAAAQFNLGLMYDKGQGGVRQDHAEAFK 59
Query: 187 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 246
QA+ G V AQY L + RG GV + +A +WY +AA+ G+ +A YN + Y G
Sbjct: 60 WYSQAAKQGFVLAQYNLGVMYDRGLGVRKDYAQAVKWYRQAAQQGFAQAQYNLGVMYYDG 119
Query: 247 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
G+ + QA KWM++ A G+ +AQ G+ ++ EG+
Sbjct: 120 LGVRKDYSQAAKWMRQTAQQGNARAQYNLGV-MYAEGQ 156
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 125 LDSFLKGAARGSTLAMVDAGLMYWEMDKKEA--------AISLYRQAAVLGDPAGQFNLG 176
L L+ A +G+ A + GLMY DK + A Y QAA G Q+NLG
Sbjct: 21 LQKTLQSARQGNAAAQFNLGLMY---DKGQGGVRQDHAEAFKWYSQAAKQGFVLAQYNLG 77
Query: 177 ISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
+ Y + +AVK QA+ G +AQY L + + G GV + +AA+W + A
Sbjct: 78 VMYDRGLGVRKDYAQAVKWYRQAAQQGFAQAQYNLGVMYYDGLGVRKDYSQAAKWMRQTA 137
Query: 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
+ G RA YN + Y+ G+G+ + + A++W A + G+
Sbjct: 138 QQGNARAQYNLGVMYAEGQGVRQNLKVAKEWFGMACNNGN 177
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQAAVLGDPAG 171
GVR++ +A + + A +G LA + G+MY + K A A+ YRQAA G
Sbjct: 49 GVRQDHAEAFKWYSQAAKQGFVLAQYNLGVMYDRGLGVRKDYAQAVKWYRQAAQQGFAQA 108
Query: 172 QFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223
Q+NLG+ Y +A K + Q + G+ RAQY L + G+GV NL+ A W
Sbjct: 109 QYNLGVMYYDGLGVRKDYSQAAKWMRQTAQQGNARAQYNLGVMYAEGQGVRQNLKVAKEW 168
Query: 224 YLRAAEGGYVRAMYNTSLCYSF 245
+ A G N S C ++
Sbjct: 169 FGMACNNG------NQSGCENY 184
>gi|386742465|ref|YP_006215644.1| hypothetical protein S70_05385 [Providencia stuartii MRSN 2154]
gi|384479158|gb|AFH92953.1| hypothetical protein S70_05385 [Providencia stuartii MRSN 2154]
Length = 224
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W--EMDKKEA 155
A R G +++G GV ++ KA + K A + + A G+M+ W E D ++A
Sbjct: 29 ATAQYRLGTMYQYGEGVIQDYQKARQWYEKAAKQNNADAQYKLGVMFSHGWGGEQDDQQA 88
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVR--------AQYQLALCL 207
+ Y ++A G+ + Q NLG+ + E V+ YQ ++ +++ AQ L +
Sbjct: 89 RL-WYLKSAQQGNSSAQSNLGVMFYLGEGVEQDYQQALRWYLKSAEQNNSAAQNNLGVLY 147
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV+ + Q+A +WY + AE A +N + Y G G+ S A+ W ++ D G
Sbjct: 148 QYGNGVEQDYQQALQWYQKGAEQDNELAQFNLAQMYDKGLGVRQSKSTAKIWYSKSCDNG 207
Query: 268 H 268
+
Sbjct: 208 N 208
>gi|389691453|ref|ZP_10180247.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
gi|388588436|gb|EIM28726.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
Length = 1058
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 161 RQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
+ AA+ GD A + + G++ + A +L + + AG AQ +LA+ +G G
Sbjct: 847 QHAALSGDAAALYEIASRAAEGRGMARDTKAAARLFERVAQAGLPPAQERLAMMHEKGEG 906
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ +L++AA WY RAA GG +R+M+N + + G+ + A +W AA+ G +Q
Sbjct: 907 IPLDLKQAAFWYERAALGGNIRSMHNLATVLASGKNGKPDYAAALRWYAEAAEYGLRDSQ 966
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
G+ G+ + + KA + LA G+T A + I +S A + V+
Sbjct: 967 YNLGILLARGIGAKPDRSKAYQWFSLAADQGDTEAVQKREEIAVFMSQAELKAAKVAVEL 1026
Query: 329 WR 330
WR
Sbjct: 1027 WR 1028
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 169 PAGQFNLG---ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
PAGQF + I + + L A+++G A Y++A GRG+ + + AAR +
Sbjct: 824 PAGQFLVDPATIDGIPVDTPASLQHAALSGDAAALYEIASRAAEGRGMARDTKAAARLFE 883
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
R A+ G A ++ + GEG+PL +QA W +RAA G+
Sbjct: 884 RVAQAGLPPAQERLAMMHEKGEGIPLDLKQAAFWYERAALGGN 926
>gi|329848145|ref|ZP_08263173.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
gi|328843208|gb|EGF92777.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
Length = 243
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKL--------LYQASIAGHVRAQYQLALCLHRGRG 212
+QAA GD Q+ LG+ Y E V +A++ G AQY +A+ G+G
Sbjct: 22 QQAAQRGDAKAQYRLGVIYDSGEGVAADPRKAFDWFQRAAMQGLPEAQYNVAVMYDEGQG 81
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + AA WY AAE G V A YN + Y+ G+G A W+ +AA+ G+ AQ
Sbjct: 82 VAQSFVMAANWYNAAAEQGVVEAQYNLGMMYAQGQGPAQDDATAAYWLYKAANQGYAPAQ 141
Query: 273 LEHGL 277
GL
Sbjct: 142 YNIGL 146
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 80/196 (40%), Gaps = 18/196 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A R G + G GV + KA D F + A +G A + +MY E + +
Sbjct: 29 DAKAQYRLGVIYDSGEGVAADPRKAFDWFQRAAMQGLPEAQYNVAVMYDEGQGVAQSFVM 88
Query: 160 ----YRQAAVLGDPAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLALCL 207
Y AA G Q+NLG+ Y Q + A LY+A+ G+ AQY + L
Sbjct: 89 AANWYNAAAEQGVVEAQYNLGMMYAQGQGPAQDDATAAYWLYKAANQGYAPAQYNIGLSY 148
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV + A W+L AA G + + CY G G +A W A + G
Sbjct: 149 LNGAGVAVDPLTACHWFLMAARQGDGESQIEIAKCYETGRGGARDPVKAYAWALVAVETG 208
Query: 268 HGKAQLEHGLGLFTEG 283
+ G G + EG
Sbjct: 209 ------QDGSGAYLEG 218
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQAAVLGDPAGQFNLGISYLQE 182
+ A RG A G++Y D E A +++AA+ G P Q+N+ + Y +
Sbjct: 23 QAAQRGDAKAQYRLGVIY---DSGEGVAADPRKAFDWFQRAAMQGLPEAQYNVAVMYDEG 79
Query: 183 EAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
+ V + A+ G V AQY L + +G+G + AA W +AA GY
Sbjct: 80 QGVAQSFVMAANWYNAAAEQGVVEAQYNLGMMYAQGQGPAQDDATAAYWLYKAANQGYAP 139
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVV 290
A YN L Y G G+ + A W AA G G++Q+E + G + +KA
Sbjct: 140 AQYNIGLSYLNGAGVAVDPLTACHWFLMAARQGDGESQIEIAKCYETGRGGARDPVKAYA 199
Query: 291 YLELATRAGETAADHVKNVILQQLSATSRDR 321
+ +A G+ + L+ L AT D+
Sbjct: 200 WALVAVETGQDGS----GAYLEGLGATVNDK 226
>gi|113460459|ref|YP_718521.1| TPR repeat-containing protein [Haemophilus somnus 129PT]
gi|112822502|gb|ABI24591.1| conserved hypothetical protein, with TPR repeat (tetratrico peptide
repeat) [Haemophilus somnus 129PT]
Length = 252
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASI 193
D + E AA L++Q A G Q+NLG+ Y + +AV +A+
Sbjct: 30 DRAYQFIEQQNYSAAFPLFKQLAEQGLANAQYNLGVMYKKGRGVAQSDTQAVYWWKKAAE 89
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
G AQY L L +GRGV + +A WY +AAE G A Y+ G G+ ++
Sbjct: 90 QGLADAQYNLGLMYKKGRGVAQSDTQAIYWYTKAAEQGIAEAQSKLGGMYAKGRGVTQNY 149
Query: 254 RQARKWMKRAADCGHGKAQLEHGL 277
+QA W +AA+ G K QL GL
Sbjct: 150 QQAVYWFTKAAEQGDAKVQLLLGL 173
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +K GRGV ++ +A+ + K A +G A + GLMY + AI Y +A
Sbjct: 64 GVMYKKGRGVAQSDTQAVYWWKKAAEQGLADAQYNLGLMYKKGRGVAQSDTQAIYWYTKA 123
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDF 215
A G Q LG Y + V YQ ++ G + Q L L GR V
Sbjct: 124 AEQGIAEAQSKLGGMYAKGRGVTQNYQQAVYWFTKAAEQGDAKVQLLLGLMYENGRSVTQ 183
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
N Q+A WY +AAE G A + Y FG G+ + A+++ +A D G+
Sbjct: 184 NYQQAVYWYTKAAEQGIAEAQLYLGVMYEFGRGVQKNVSTAKEFYGKACDNGN 236
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQF 173
++N A F + A +G A + G+MY + A+ +++AA G Q+
Sbjct: 38 QQNYSAAFPLFKQLAEQGLANAQYNLGVMYKKGRGVAQSDTQAVYWWKKAAEQGLADAQY 97
Query: 174 NLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
NLG+ Y + +A+ +A+ G AQ +L +GRGV N Q+A W+
Sbjct: 98 NLGLMYKKGRGVAQSDTQAIYWYTKAAEQGIAEAQSKLGGMYAKGRGVTQNYQQAVYWFT 157
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+AAE G + L Y G + +++QA W +AA+ G +AQL G+
Sbjct: 158 KAAEQGDAKVQLLLGLMYENGRSVTQNYQQAVYWYTKAAEQGIAEAQLYLGV 209
>gi|377555776|ref|ZP_09785504.1| hypothetical protein eofBa_01839, partial [endosymbiont of
Bathymodiolus sp.]
Length = 474
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
Q + +G+ AQ+ LA G G + NL++A WY +AA+ G++ A Y + Y FG G+
Sbjct: 90 QVAESGYSTAQFNLAELYDSGVGTEKNLKQAIFWYAKAAQQGFIAAQYKLATIYHFGRGV 149
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
+ +AR W +AA G AQL G L+ +GE
Sbjct: 150 EVDDVKARYWYTKAAKLGLAPAQLALG-KLYDKGE 183
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%)
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
+G++RAQ LA HRG V + + A WY + AE GY A +N + Y G G +
Sbjct: 58 SGNIRAQLSLARMYHRGINVTKDTKLAFYWYSQVAESGYSTAQFNLAELYDSGVGTEKNL 117
Query: 254 RQARKWMKRAADCGHGKAQ 272
+QA W +AA G AQ
Sbjct: 118 KQAIFWYAKAAQQGFIAAQ 136
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 160 YRQAAVLGDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGR 211
Y Q A G QFNL G ++A+ +A+ G + AQY+LA H GR
Sbjct: 88 YSQVAESGYSTAQFNLAELYDSGVGTEKNLKQAIFWYAKAAQQGFIAAQYKLATIYHFGR 147
Query: 212 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
GV+ + +A WY +AA+ G A Y GEG+ A+ W + AA + +A
Sbjct: 148 GVEVDDVKARYWYTKAAKLGLAPAQLALGKLYDKGEGVAKDLAAAQHWYEVAAVQSNAEA 207
Query: 272 Q 272
Q
Sbjct: 208 Q 208
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-------AAISLYRQA 163
+ GRGV + KA + K A G A + G +Y DK E AA Y A
Sbjct: 143 YHFGRGVEVDDVKARYWYTKAAKLGLAPAQLALGKLY---DKGEGVAKDLAAAQHWYEVA 199
Query: 164 AVLGDPAGQFNLGISYLQEEA---VKLLYQASIA-GHVRAQYQLALCLHRGRGVDFNLQE 219
AV + Q+ L + ++E L+YQ S A +AQ +LA ++GR + + E
Sbjct: 200 AVQSNAEAQYYLADLFERQEKFFQALLMYQQSAAQKFTKAQLRLAQLYYQGRLSEKDDVE 259
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
A + L AE G V A + + Y + + +A+ W +A GH A+
Sbjct: 260 ALKLALIVAEKGNVEAQFLVARIYHSSLQVKQNLTKAKYWYNKAFKQGHASAE 312
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 8/139 (5%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L GK + G GV K+L A + A + + A ++ +K A+ +Y+Q+A
Sbjct: 173 LALGKLYDKGEGVAKDLAAAQHWYEVAAVQSNAEAQYYLADLFERQEKFFQALLMYQQSA 232
Query: 165 VLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
Q L Y Q EA+KL + G+V AQ+ +A H V N
Sbjct: 233 AQKFTKAQLRLAQLYYQGRLSEKDDVEALKLALIVAEKGNVEAQFLVARIYHSSLQVKQN 292
Query: 217 LQEAARWYLRAAEGGYVRA 235
L +A WY +A + G+ A
Sbjct: 293 LTKAKYWYNKAFKQGHASA 311
>gi|418058985|ref|ZP_12696946.1| Sel1 domain protein repeat-containing protein [Methylobacterium
extorquens DSM 13060]
gi|373567492|gb|EHP93460.1| Sel1 domain protein repeat-containing protein [Methylobacterium
extorquens DSM 13060]
Length = 464
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 18/234 (7%)
Query: 87 VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM 146
K W + A + G ++ G+GV K+ A + KGA G+ AM + G +
Sbjct: 213 AAKGWFEKAASAGSAEAMNDLGLVYEDGQGVAKDDAAAKGWYEKGAEAGNPFAMTNLGSL 272
Query: 147 YWEMD--KKEAAIS--LYRQAAVLGDPAGQFNLGISYLQEEAV-------KLLY-QASIA 194
Y K++ A + Y +AA +P G LG+ Y V KL Y +A+ A
Sbjct: 273 YENGQGVKQDYATAKLWYEKAAAADNPDGMRGLGLLYGNGRGVTQDYATAKLWYDKAANA 332
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G A L + G+GV + A WY +AA G +++YN Y G+G+ +
Sbjct: 333 GSAFAMNDLGILYDNGQGVKQDYATAKLWYEKAAAAGNAQSIYNLGALYENGQGVKKDYG 392
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 303
A+ W ++AAD G + G L+ EG + A ++ E A G+T A
Sbjct: 393 AAKLWYEKAADAGSPEGMSALGT-LYAEGWGVARDRSAAKLWYEKAAALGDTGA 445
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
LG++ A +A+ AG A L L G+GV + A WY + AE G
Sbjct: 204 GLGVTQDYAAAKGWFEKAASAGSAEAMNDLGLVYEDGQGVAKDDAAAKGWYEKGAEAGNP 263
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
AM N Y G+G+ + A+ W ++AA
Sbjct: 264 FAMTNLGSLYENGQGVKQDYATAKLWYEKAA 294
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEAAIS--LYRQAAVL 166
+ +GRGV ++ A + K A GS AM D G++Y + K++ A + Y +AA
Sbjct: 309 YGNGRGVTQDYATAKLWYDKAANAGSAFAMNDLGILYDNGQGVKQDYATAKLWYEKAAAA 368
Query: 167 GDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G+ +NLG Y + VK Y +A+ AG L G GV +
Sbjct: 369 GNAQSIYNLGALYENGQGVKKDYGAAKLWYEKAADAGSPEGMSALGTLYAEGWGVARDRS 428
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
A WY +AA G AM + + G G + R
Sbjct: 429 AAKLWYEKAAALGDTGAMQKIAALFEKGTGKAGAKR 464
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 259
++L L G+GV + A WY +AA G +MYN + FG G+ + A+ W
Sbjct: 51 HKLGLLFEEGQGVAQDYAAARGWYEKAAAKGLAESMYNLGILDEFGRGVAQDYPAAKGW 109
>gi|323451413|gb|EGB07290.1| hypothetical protein AURANDRAFT_64980 [Aureococcus anophagefferens]
Length = 652
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 144 GLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ----ASIA 194
GL+Y ++DKK+A L+R AA GD Q NLG + EE V+ ++ A+
Sbjct: 5 GLLYNNGSGVKLDKKKAE-RLFRMAADRGDADAQCNLGAFFHSEERVEEGFRYFALAADQ 63
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G+ A+ L LC GV + ++AA+ ++RA E G V AM Y G G+ L +
Sbjct: 64 GYTYAESNLGLCRL---GVVKSDKKAAKIWMRAVELGDVDAMVELGELYYAGLGVKLDKK 120
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQL 314
+A + + AAD G AQ G L +E ++ +A Y LA G T+A+H V
Sbjct: 121 KAERLYRAAADRGDALAQSNIGAFLHSEKKLEEAFRYYALAANQGYTSAEHNLGVYCSYG 180
Query: 315 SATSRD 320
+ T D
Sbjct: 181 AGTEVD 186
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 101/241 (41%), Gaps = 26/241 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISL 159
+ W R G+ K+ KA + + A G AM + G +Y ++DKK+A L
Sbjct: 275 IDWRDRGHRKLGLVKSDKKAAKIWKRAVALGDVEAMNNLGTLYDNGSGVKLDKKKAE-RL 333
Query: 160 YRQAAVLGDPAGQFNLG----ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
YR AA GD Q NLG EEA + A+ G A+ L C G G +
Sbjct: 334 YRAAADRGDAFAQNNLGALLDTEKKFEEAFRYYTLAANQGETFAENSLGCCYLWGEGTEV 393
Query: 216 NLQEAARWYLRAAEGGY----------------VRAMYNTSLCYSFGEGLPLSHRQARKW 259
++ +A W+ RAA G+ V AM + Y+ G G+ L ++A +
Sbjct: 394 DVGKARYWFERAAAKGHEKARGNLAELNAQLGNVSAMVRLAELYNEGLGVKLDKKKAERL 453
Query: 260 MKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 319
+ AAD GH AQ G L + + +A Y LA G T A+ + + T
Sbjct: 454 YRTAADRGHAVAQANLGFLLDSVKKHEEAFRYYALAAEQGFTLAEACLGICYRDGDGTEV 513
Query: 320 D 320
D
Sbjct: 514 D 514
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPA 170
GV K+ KA +++ G AMV+ G +Y+ ++DKK+A LYR AA GD
Sbjct: 78 GVVKSDKKAAKIWMRAVELGDVDAMVELGELYYAGLGVKLDKKKAE-RLYRAAADRGDAL 136
Query: 171 GQFNLGISYLQ-----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
Q N+G ++L EEA + A+ G+ A++ L + G G + +L +A W+
Sbjct: 137 AQSNIG-AFLHSEKKLEEAFRYYALAANQGYTSAEHNLGVYCSYGAGTEVDLGKARYWFE 195
Query: 226 RAAEGGYVRAM 236
RAA G+ A+
Sbjct: 196 RAAAKGFQPAI 206
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G G +L K+ F + AA+G+ L VDA EM K
Sbjct: 505 YRDGDGTEVDLGKSRYWFERAAAKGNELGDVDAMESLAEMYGK----------------- 547
Query: 171 GQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
LG+ +++A +L A+ G AQ ++A L ++ ++EA R+Y AA+
Sbjct: 548 ---GLGVKLDKKKAERLYRTAADRGSAFAQNRIACLLD----LEKRMEEAFRYYALAADQ 600
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
G A + CY GEG + +AR W +RAA
Sbjct: 601 GATFAENSLGCCYRDGEGTEVDLGKARYWFERAA 634
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 175 LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 234
LG+ +++A +L A+ GH AQ L L + +EA R+Y AAE G+
Sbjct: 441 LGVKLDKKKAERLYRTAADRGHAVAQANLGFLLDSVK----KHEEAFRYYALAAEQGFTL 496
Query: 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
A +CY G+G + ++R W +RAA G+
Sbjct: 497 AEACLGICYRDGDGTEVDLGKSRYWFERAAAKGN 530
>gi|290983842|ref|XP_002674637.1| sel1-like repeat domain-containing protein [Naegleria gruberi]
gi|284088228|gb|EFC41893.1| sel1-like repeat domain-containing protein [Naegleria gruberi]
Length = 286
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 125 LDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYL---- 180
+D F++ A S L AG + + LY +AA LG Q+++G +
Sbjct: 82 VDLFVEIADTHSPLFFRKAGNIMYANKMNSKGFDLYLKAAELGHSLSQYSIGREFEFRKD 141
Query: 181 QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 240
EA K +AS G V++Q +L +G+G + N+++A W ++AA+ G+VRA YN S
Sbjct: 142 YNEAFKWFSKASQQGIVKSQCKLGSFYAKGKGTEKNVRKAFEWTIKAAKKGHVRAQYNLS 201
Query: 241 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 298
+ + G + W+++AA H +A + G+ L E LEL RA
Sbjct: 202 ILFRVEPGYEDKEMKIF-WLEKAAQQDHPRAINDLGVSLTCGDEFEDLERALELFKRA 258
>gi|367478124|ref|ZP_09477446.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365269684|emb|CCD89914.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 1166
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
R AA+ GDP+ + +G+ + + EEA K +A+ AG + A ++L +G G
Sbjct: 941 RNAALKGDPSAAYEVGVRFAEGKGIAPNYEEAAKWYDRAAQAGLIPAVFRLGTFYEKGLG 1000
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V + A R+Y+ AAE G +AM+N ++ + G G +++ A +W ++AA+ G +Q
Sbjct: 1001 VKKDADIARRYYVVAAERGNAKAMHNLAVLDADGGGKGANYKSASQWFRKAAERGVADSQ 1060
Query: 273 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 328
G+ G+ E + ++ + LA G+ A ++ + ++L A S A L + +
Sbjct: 1061 FNLGILYARGIGVEQNLAESYKWFTLAAAQGDADAGRKRDDVAKRLDAQSLAAAKLAIQT 1120
Query: 329 WRAMP 333
+ P
Sbjct: 1121 FTVEP 1125
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 247
L A++ G A Y++ + G+G+ N +EAA+WY RAA+ G + A++ Y G
Sbjct: 940 LRNAALKGDPSAAYEVGVRFAEGKGIAPNYEEAAKWYDRAAQAGLIPAVFRLGTFYEKGL 999
Query: 248 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
G+ AR++ AA+ G+ KA H L +
Sbjct: 1000 GVKKDADIARRYYVVAAERGNAKAM--HNLAVL 1030
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 32/125 (25%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISL 159
+ R G ++ G GV+K+ D A ++ A RG+ AM + ++ + K ++A
Sbjct: 988 VFRLGTFYEKGLGVKKDADIARRYYVVAAERGNAKAMHNLAVLDADGGGKGANYKSASQW 1047
Query: 160 YRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+R+AA G QFNLGI Y RG GV+ NL E
Sbjct: 1048 FRKAAERGVADSQFNLGILYA----------------------------RGIGVEQNLAE 1079
Query: 220 AARWY 224
+ +W+
Sbjct: 1080 SYKWF 1084
>gi|303289997|ref|XP_003064286.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454602|gb|EEH51908.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 151
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 162 QAAVLGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
QAA G Q LG Y EAVKL QA G+V AQY L + G GV
Sbjct: 1 QAAEKGHAGAQNRLGRCYYHGRGVEKNHVEAVKLYRQAVEHGYVGAQYDLGVSYEHGEGV 60
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
+ N+ EA +WY +AAE Y A N + Y GEG + +A KW +AA+ + AQ
Sbjct: 61 EKNMAEAVKWYHQAAEQSYAYAQNNLGVSYEHGEGEEKNMAEAVKWYHQAAEQSYAYAQ 119
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 70/171 (40%), Gaps = 41/171 (23%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G+ + HGRGV KN +A + LYRQA
Sbjct: 13 RLGRCYYHGRGVEKNHVEA--------------------------------VKLYRQAVE 40
Query: 166 LGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
G Q++LG+SY EAVK +QA+ + AQ L + G G + N+
Sbjct: 41 HGYVGAQYDLGVSYEHGEGVEKNMAEAVKWYHQAAEQSYAYAQNNLGVSYEHGEGEEKNM 100
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAADCG 267
EA +WY +AAE Y A N CY F G +A W+ +A + G
Sbjct: 101 AEAVKWYHQAAEQSYAYAQNNLGRCYYFSYGHCERDLGKAEHWLAKAVENG 151
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
QA+ GH AQ +L C + GRGV+ N EA + Y +A E GYV A Y+ + Y GEG+
Sbjct: 1 QAAEKGHAGAQNRLGRCYYHGRGVEKNHVEAVKLYRQAVEHGYVGAQYDLGVSYEHGEGV 60
Query: 250 PLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATR 297
+ +A KW +AA+ + AQ EHG G E M +AV + A
Sbjct: 61 EKNMAEAVKWYHQAAEQSYAYAQNNLGVSYEHGEG--EEKNMAEAVKWYHQAAE 112
>gi|256819152|ref|YP_003140431.1| Sel1 domain-containing protein repeat-containing protein
[Capnocytophaga ochracea DSM 7271]
gi|256580735|gb|ACU91870.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea DSM 7271]
Length = 811
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F + +SY Q+ VK L + + G V+AQ +LA +G+GV + QEA W + AE G
Sbjct: 11 FLVTLSYGQDANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGD 70
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
+ A Y + CY G+G+ S ++ +W+ + AD G+ +AQ E L
Sbjct: 71 LNAQYQLAQCYFNGKGVSKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 255
+ + QY LA C + G G+D + ++AA +Y +A Y A + CY GEG+ S +
Sbjct: 725 YAQGQYNLANCYYNGNGIDRSYEKAANYYKLSARKDYAPAQFRLGHCYYHGEGIEQSDSR 784
Query: 256 ARKWMKRAADCGHGKA 271
A W ++A D G KA
Sbjct: 785 AADWFEQACDNGEKKA 800
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q L +Y + + V+ YQ ++ G + AQYQLA C G+GV + Q
Sbjct: 33 GDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQYQLAQCYFNGKGVSKSPQ 92
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 274
+ W + A+ G A +LCY G+G+ S + +++ A+ + + QL+
Sbjct: 93 KGVEWLTKVADAGNPEAQRELALCYRDGKGVEQSKEKYYALIEKHAEKENPEVQLDLAKA 152
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAAD 304
+ G ++ KA + E A++ G + A+
Sbjct: 153 YHSGEGVTKDVNKAKYWAEQASKNGNSEAE 182
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 123 KALDSFLKGAARGSTLA---MVDAGLMYWEMDKKEA-AISLYRQAAVLGDPAGQFNLGIS 178
+A+ + A +G+T A + DA L ++K EA AI + +AA GD + LG
Sbjct: 198 EAIKRLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKAAKGGDAEAMYQLGNF 257
Query: 179 YLQ----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 228
Y ++A+ QA+ G+ AQ QLALC + G G + + ++A W L++
Sbjct: 258 YFYGNSPLIGKYYKKAINYYTQAANKGNAAAQAQLALCFYNGIGTNASPKDAFSWILKSV 317
Query: 229 EGGYV-RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM-- 285
+A N +CY+ G G S+ QA ++ ++AA+ G AQ G L EG++
Sbjct: 318 NTNPTPKAQNNLGVCYAVGIGAHPSNAQALEFFQKAAEAGDVTAQYNLGNMLLQEGQLDV 377
Query: 286 MKAVVYLE 293
K YLE
Sbjct: 378 KKGFDYLE 385
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNL- 175
D + +K A +G A + Y++ +EA + L + A GD Q+ L
Sbjct: 20 DANVKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWL-EKVAETGDLNAQYQLA 78
Query: 176 -------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL--- 225
G+S ++ V+ L + + AG+ AQ +LALC G+GV+ Q ++Y
Sbjct: 79 QCYFNGKGVSKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVE---QSKEKYYALIE 135
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ AE + + Y GEG+ +A+ W ++A+ G+ +A+L
Sbjct: 136 KHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEL 183
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQE------EAVKLLYQASIAGHVRAQYQLALCLHR 209
A+ +++AA GD Q+NLG LQE + L +A+ A H+ A +L
Sbjct: 346 ALEFFQKAAEAGDVTAQYNLGNMLLQEGQLDVKKGFDYLEKAAAANHLLALKKLGDLYFN 405
Query: 210 GRGVDFNLQEAARWYLRAA------------------EGGYVRAMYNTSLCYSFGEGLPL 251
G+ + + + A +Y +A+ E Y +YN S CY+ G+G+
Sbjct: 406 GKYTNQSFERAFEYYTKASKQTPTPQKEMLDYFYQGQEEAYADVLYNLSQCYAEGKGVKK 465
Query: 252 SHRQARKWMKRAA 264
S R+A KW +AA
Sbjct: 466 SMREASKWAVKAA 478
>gi|284006465|emb|CBA71725.1| conserved Sel1 repeat protein [Arsenophonus nasoniae]
Length = 487
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 40/228 (17%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K+W + ++A G +++G GV +N +KA + + K A G A+ + +Y
Sbjct: 160 AKNWYEKAALQQDAYAQFVLGYLYQNGFGVSQNYNKAKEWYEKSADLGDLGALNNLAQIY 219
Query: 148 ---WEMDKKEA-AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQL 203
+ + K A AI LYR+AA GD AQY +
Sbjct: 220 EKGYGVKKNPAYAIELYRRAAYSGDAI----------------------------AQYNM 251
Query: 204 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263
G ++ N +A WY RAAE G++ A Y+ + Y G G+ + AR+W +
Sbjct: 252 GFIYDDGEYLEKNNYQAFYWYKRAAEQGHIDAQYHLAEFYQHGYGVEQNAILARQWYEVL 311
Query: 264 ADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAADH 305
A+ G+ A + E G+G+ + +++KA ++ +GE A +
Sbjct: 312 ANAGYADASMKVAYYYEKGIGI--KKDLIKAAELYQIMANSGEAEAQY 357
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFN 174
+ +++++ KA F K G++ A G++ +AAI+ ++ A GDP Q
Sbjct: 83 KDIQEDIGKASFWFEKAIKEGNSDAFYYMGVINQRKKDYKAAITWLQRGANKGDPYAQSG 142
Query: 175 LGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226
LG Y ++A +A++ AQ+ L G GV N +A WY +
Sbjct: 143 LGYMYTVGLGVDKDYKQAKNWYEKAALQQDAYAQFVLGYLYQNGFGVSQNYNKAKEWYEK 202
Query: 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM 286
+A+ G + A+ N + Y G G+ + A + +RAA G AQ G ++ +GE +
Sbjct: 203 SADLGDLGALNNLAQIYEKGYGVKKNPAYAIELYRRAAYSGDAIAQYNMGF-IYDDGEYL 261
Query: 287 KAVVY 291
+ Y
Sbjct: 262 EKNNY 266
>gi|254514665|ref|ZP_05126726.1| Sel1 domain protein repeat-containing protein [gamma
proteobacterium NOR5-3]
gi|219676908|gb|EED33273.1| Sel1 domain protein repeat-containing protein [gamma
proteobacterium NOR5-3]
Length = 199
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+ A+ + A+ G QY L G GV + + A RWY AAE G A Y+ +
Sbjct: 39 QSALAIFSSAAEEGDAVGQYGLGAMYRDGDGVPQDYKAAVRWYTAAAEQGLALAQYDLGV 98
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATR 297
YS G+G+P S + A +W AA+ G KAQ +GLG + + A ++ +A
Sbjct: 99 MYSEGKGVPQSDKAAVRWYTPAAEQGLAKAQNNLAAMYGLGRGVPQDFVYAYMWSNIAAS 158
Query: 298 -AGETAADHVKNVILQQLS 315
+GE+A +++++ +Q+S
Sbjct: 159 ISGESATKSLRDIVARQMS 177
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASI--------AGHVRAQYQLAL 205
++A++++ AA GD GQ+ LG Y + V Y+A++ G AQY L +
Sbjct: 39 QSALAIFSSAAEEGDAVGQYGLGAMYRDGDGVPQDYKAAVRWYTAAAEQGLALAQYDLGV 98
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
G+GV + + A RWY AAE G +A N + Y G G+P A W AA
Sbjct: 99 MYSEGKGVPQSDKAAVRWYTPAAEQGLAKAQNNLAAMYGLGRGVPQDFVYAYMWSNIAA 157
>gi|237748264|ref|ZP_04578744.1| LOW QUALITY PROTEIN: Sel1 repeat-containing protein [Oxalobacter
formigenes OXCC13]
gi|229379626|gb|EEO29717.1| LOW QUALITY PROTEIN: Sel1 repeat-containing protein [Oxalobacter
formigenes OXCC13]
Length = 311
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G ++ G V K++ KA D FL+ A + + G MY KE A Y A
Sbjct: 81 GYMYREGLAVPKDIQKAFDLFLESARQNNPRGQYGMGTMYDLGLIVKQDKEKAFKWYMYA 140
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q+N+GI Y + K Y+ A + GH A L L +RG G
Sbjct: 141 AENGYKNAQYNIGIMYARGRGTKRDYKKAREWYEKAVLQGHKGAMTNLGLLYYRGWGGPK 200
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
+ ++A RAA+ G A YN + Y G G+P ++QA W + A+ G+ A
Sbjct: 201 DYAKSAELNTRAAKLGDDIAQYNLARDYENGTGVPKDYKQAVYWYFKGAENGNAMA 256
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQAS 192
++ GL ++ + E A+ +++ +P Q LG Y + ++A L +++
Sbjct: 46 IEKGLKLFKKQEYEKALPYFQKPVAQKNPDVQAALGYMYREGLAVPKDIQKAFDLFLESA 105
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
+ R QY + G V + ++A +WY+ AAE GY A YN + Y+ G G
Sbjct: 106 RQNNPRGQYGMGTMYDLGLIVKQDKEKAFKWYMYAAENGYKNAQYNIGIMYARGRGTKRD 165
Query: 253 HRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAAD 304
+++AR+W ++A GH A GL L+ G + K+ EL TRA + D
Sbjct: 166 YKKAREWYEKAVLQGHKGAMTNLGL-LYYRGWGGPKDYAKSA---ELNTRAAKLGDD 218
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQF 173
++ +KAL F K A+ + G MY E + A L+ ++A +P GQ+
Sbjct: 55 KQEYEKALPYFQKPVAQKNPDVQAALGYMYREGLAVPKDIQKAFDLFLESARQNNPRGQY 114
Query: 174 NLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
+G Y +E+A K A+ G+ AQY + + RGRG + ++A WY
Sbjct: 115 GMGTMYDLGLIVKQDKEKAFKWYMYAAENGYKNAQYNIGIMYARGRGTKRDYKKAREWYE 174
Query: 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 279
+A G+ AM N L Y G G P + ++ + RAA G AQ E+G G+
Sbjct: 175 KAVLQGHKGAMTNLGLLYYRGWGGPKDYAKSAELNTRAAKLGDDIAQYNLARDYENGTGV 234
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 15/173 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G V+++ +KA ++ A G A + G+MY + D K+A Y +
Sbjct: 117 GTMYDLGLIVKQDKEKAFKWYMYAAENGYKNAQYNIGIMYARGRGTKRDYKKAR-EWYEK 175
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A + G NLG+ Y + ++ +L +A+ G AQY LA G GV
Sbjct: 176 AVLQGHKGAMTNLGLLYYRGWGGPKDYAKSAELNTRAAKLGDDIAQYNLARDYENGTGVP 235
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADC 266
+ ++A WY + AE G AM Y GLP +A W ++A +
Sbjct: 236 KDYKQAVYWYFKGAENGNAMAMERLYEAYHLNRLGLPRDDEKAHYWAEKARET 288
>gi|309780215|ref|ZP_07674966.1| Sel1 repeat protein [Ralstonia sp. 5_7_47FAA]
gi|308920918|gb|EFP66564.1| Sel1 repeat protein [Ralstonia sp. 5_7_47FAA]
Length = 237
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EE 183
A RG A+ + ++E + A + +AA G+ QFN + ++ +E
Sbjct: 25 AVRGDADALTQIAIAHYEKNDFGHAFDEFAEAAQRGNRLAQFNYAMMLMRGEGTVARPDE 84
Query: 184 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 243
AVK L +A+ AQ+ RG V +L+EA +WY RAA GG+V A + Y
Sbjct: 85 AVKWLRRAADNQMTHAQFAYGELFERGELVPRSLEEANKWYERAAAGGHVEAQRALATDY 144
Query: 244 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
G G+P + +A W K+AA+ G +Q
Sbjct: 145 FTGRGVPRDYGRAFSWYKKAAEGGDAPSQ 173
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAGQF 173
+ + A D F + A RG+ LA + +M + + + A+ R+AA QF
Sbjct: 43 KNDFGHAFDEFAEAAQRGNRLAQFNYAMMLMRGEGTVARPDEAVKWLRRAADNQMTHAQF 102
Query: 174 NLG--------ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225
G + EEA K +A+ GHV AQ LA GRGV + A WY
Sbjct: 103 AYGELFERGELVPRSLEEANKWYERAAAGGHVEAQRALATDYFTGRGVPRDYGRAFSWYK 162
Query: 226 RAAEGGYVRAMYNTSLCYSFGEG--LPLSHRQARKWMKRAADCG 267
+AAEGG + Y Y GE +P QA+KW RAA G
Sbjct: 163 KAAEGGDAPSQYIVGSYYERGEPGVVPQDIEQAKKWYGRAAAQG 206
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Query: 164 AVLGDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
AV GD + I++ ++ A +A+ G+ AQ+ A+ L RG G E
Sbjct: 25 AVRGDADALTQIAIAHYEKNDFGHAFDEFAEAAQRGNRLAQFNYAMMLMRGEGTVARPDE 84
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A +W RAA+ A + + GE +P S +A KW +RAA GH +AQ
Sbjct: 85 AVKWLRRAADNQMTHAQFAYGELFERGELVPRSLEEANKWYERAAAGGHVEAQRALATDY 144
Query: 280 FT 281
FT
Sbjct: 145 FT 146
>gi|417152875|ref|ZP_11991666.1| Sel1 repeat protein [Escherichia coli 96.0497]
gi|417579917|ref|ZP_12230736.1| hypothetical protein ECSTECB2F1_0559 [Escherichia coli STEC_B2F1]
gi|417665768|ref|ZP_12315333.1| hypothetical protein ECSTECO31_0566 [Escherichia coli STEC_O31]
gi|422777324|ref|ZP_16830977.1| Sel1 [Escherichia coli H120]
gi|432804733|ref|ZP_20038678.1| hypothetical protein A1WA_00627 [Escherichia coli KTE91]
gi|432932989|ref|ZP_20132843.1| hypothetical protein A13E_01981 [Escherichia coli KTE184]
gi|433129011|ref|ZP_20314484.1| hypothetical protein WKG_00746 [Escherichia coli KTE163]
gi|433133827|ref|ZP_20319205.1| hypothetical protein WKI_00760 [Escherichia coli KTE166]
gi|433192601|ref|ZP_20376618.1| hypothetical protein WGU_00910 [Escherichia coli KTE90]
gi|323945119|gb|EGB41181.1| Sel1 [Escherichia coli H120]
gi|345343546|gb|EGW75932.1| hypothetical protein ECSTECB2F1_0559 [Escherichia coli STEC_B2F1]
gi|386169599|gb|EIH36107.1| Sel1 repeat protein [Escherichia coli 96.0497]
gi|397786692|gb|EJK97525.1| hypothetical protein ECSTECO31_0566 [Escherichia coli STEC_O31]
gi|431357196|gb|ELG43869.1| hypothetical protein A1WA_00627 [Escherichia coli KTE91]
gi|431457022|gb|ELH37365.1| hypothetical protein A13E_01981 [Escherichia coli KTE184]
gi|431651361|gb|ELJ18622.1| hypothetical protein WKG_00746 [Escherichia coli KTE163]
gi|431662421|gb|ELJ29196.1| hypothetical protein WKI_00760 [Escherichia coli KTE166]
gi|431720855|gb|ELJ84874.1| hypothetical protein WGU_00910 [Escherichia coli KTE90]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL------GISYLQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 119
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 120 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|225686585|ref|YP_002734557.1| peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
23457]
gi|384446941|ref|YP_005661159.1| peptidoglycan-binding domain 1 protein [Brucella melitensis NI]
gi|225642690|gb|ACO02603.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
23457]
gi|349744938|gb|AEQ10480.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis NI]
Length = 949
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 669 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIG 728
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 729 SFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 788
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 789 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 848
Query: 321 RAMLVVDSWRAMP 333
RA V W+A P
Sbjct: 849 RAKGAVKLWKAKP 861
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N +K AA+ LA D G
Sbjct: 676 LREAAAKGDIRALFEIGNRYMEGRGVAEN--------VKEAAKWYQLA-ADQGF------ 720
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 721 ----APAQYR--------IGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFA 768
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 769 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 828
Query: 269 GKA 271
A
Sbjct: 829 KDA 831
>gi|265999048|ref|ZP_06111541.1| peptidoglycan binding domain-containing protein [Brucella
melitensis bv. 2 str. 63/9]
gi|384213327|ref|YP_005602410.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M5-90]
gi|384410429|ref|YP_005599049.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M28]
gi|263092001|gb|EEZ16298.1| peptidoglycan binding domain-containing protein [Brucella
melitensis bv. 2 str. 63/9]
gi|326410976|gb|ADZ68040.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M28]
gi|326554267|gb|ADZ88906.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M5-90]
Length = 978
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIG 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 758 SFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 817
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 818 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 877
Query: 321 RAMLVVDSWRAMP 333
RA V W+A P
Sbjct: 878 RAKGAVKLWKAKP 890
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N +K AA+ LA D G
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAEN--------VKEAAKWYQLA-ADQGF------ 749
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 750 ----APAQYR--------IGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFA 797
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 798 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 857
Query: 269 GKA 271
A
Sbjct: 858 KDA 860
>gi|218553186|ref|YP_002386099.1| hypothetical protein ECIAI1_0628 [Escherichia coli IAI1]
gi|417135759|ref|ZP_11980544.1| Sel1 repeat protein [Escherichia coli 5.0588]
gi|417167581|ref|ZP_12000363.1| Sel1 repeat protein [Escherichia coli 99.0741]
gi|419929009|ref|ZP_14446706.1| hypothetical protein EC5411_12283 [Escherichia coli 541-1]
gi|218359954|emb|CAQ97498.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|386153613|gb|EIH04902.1| Sel1 repeat protein [Escherichia coli 5.0588]
gi|386171299|gb|EIH43344.1| Sel1 repeat protein [Escherichia coli 99.0741]
gi|388404403|gb|EIL64866.1| hypothetical protein EC5411_12283 [Escherichia coli 541-1]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL------GISYLQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 119
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 120 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|344925530|ref|ZP_08778991.1| hypothetical protein COdytL_12859 [Candidatus Odyssella
thessalonicensis L13]
Length = 647
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
GK+ V + + L S+ G RG + GL Y ++D K+A + +
Sbjct: 355 GKQSSPSSKVTQQMAFKLFSYGAGLNRG--FSQNKLGLCYSDGIGTQIDLKQAVYWITK- 411
Query: 163 AAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLALCLHRGRGVD 214
A G+ NLG Y E V L A+ AG AQY L + +G+G+D
Sbjct: 412 ATEQGNLEAYCNLGSFYANGEGVARDHVKSLSLNKIAAKAGITIAQYNLGVNYSKGQGID 471
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ +A +W RAAE G+ A L Y G+G+P QAR W+K+AA A+
Sbjct: 472 ISYPKAIKWLTRAAEAGHGPAQLRLGLYYEKGKGVPQDKDQARWWLKQAAKQKEEDAECC 531
Query: 275 HGLGLFTEGEMMKAVVYLELATRAGETAA 303
G T GE KAV + A G+T A
Sbjct: 532 LGEFYETVGEQYKAVKWYTRAAAHGDTTA 560
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
LR G ++ G+GV ++ D+A + A + A G Y + ++ A+ Y +AA
Sbjct: 494 LRLGLYYEKGKGVPQDKDQARWWLKQAAKQKEEDAECCLGEFYETVGEQYKAVKWYTRAA 553
Query: 165 VLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFN 216
GD + LG+ Y+Q V+ LL +A+ + AQY L +C G + N
Sbjct: 554 AHGDTTAKLYLGMRYIQGNGVEKNPSQGMALLREAADHDDMDAQYNLGVCYISGEFIPHN 613
Query: 217 LQEAARWYLRAAEGGYVRAMYN 238
EA +W+ AA G+ + YN
Sbjct: 614 YSEAIKWFRLAANKGHYESQYN 635
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 80/247 (32%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYR 161
+ G + G G + +L +A+ K +G+ A + G Y + ++SL +
Sbjct: 387 KLGLCYSDGIGTQIDLKQAVYWITKATEQGNLEAYCNLGSFYANGEGVARDHVKSLSLNK 446
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
AA G Q+NLG++Y + +A+K L +A+ AGH AQ +L L +G+GV
Sbjct: 447 IAAKAGITIAQYNLGVNYSKGQGIDISYPKAIKWLTRAAEAGHGPAQLRLGLYYEKGKGV 506
Query: 214 DFN-------LQEAAR-------------------------WYLRAAEGG---------- 231
+ L++AA+ WY RAA G
Sbjct: 507 PQDKDQARWWLKQAAKQKEEDAECCLGEFYETVGEQYKAVKWYTRAAAHGDTTAKLYLGM 566
Query: 232 -YVR-------------------------AMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
Y++ A YN +CY GE +P ++ +A KW + AA+
Sbjct: 567 RYIQGNGVEKNPSQGMALLREAADHDDMDAQYNLGVCYISGEFIPHNYSEAIKWFRLAAN 626
Query: 266 CGHGKAQ 272
GH ++Q
Sbjct: 627 KGHYESQ 633
>gi|293418755|ref|ZP_06661190.1| ybeQ protein [Escherichia coli B088]
gi|300817836|ref|ZP_07098050.1| Sel1 repeat protein [Escherichia coli MS 107-1]
gi|300907822|ref|ZP_07125438.1| Sel1 repeat protein [Escherichia coli MS 84-1]
gi|301302126|ref|ZP_07208259.1| Sel1 repeat protein [Escherichia coli MS 124-1]
gi|415864168|ref|ZP_11537291.1| Sel1 repeat protein [Escherichia coli MS 85-1]
gi|415876291|ref|ZP_11542759.1| putative TPR repeat protein [Escherichia coli MS 79-10]
gi|291325283|gb|EFE64698.1| ybeQ protein [Escherichia coli B088]
gi|300400454|gb|EFJ83992.1| Sel1 repeat protein [Escherichia coli MS 84-1]
gi|300529533|gb|EFK50595.1| Sel1 repeat protein [Escherichia coli MS 107-1]
gi|300842678|gb|EFK70438.1| Sel1 repeat protein [Escherichia coli MS 124-1]
gi|315255050|gb|EFU35018.1| Sel1 repeat protein [Escherichia coli MS 85-1]
gi|342928778|gb|EGU97500.1| putative TPR repeat protein [Escherichia coli MS 79-10]
Length = 327
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 GQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL Y Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 71 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 127
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 187
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 141 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 200
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 201 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 260
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 261 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 301
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 12 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 63
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 64 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 121
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 122 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 156
>gi|260564886|ref|ZP_05835371.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
str. 16M]
gi|265990118|ref|ZP_06102675.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
str. Rev.1]
gi|260152529|gb|EEW87622.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
str. 16M]
gi|263000787|gb|EEZ13477.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
str. Rev.1]
Length = 978
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIG 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 758 SFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 817
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 818 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 877
Query: 321 RAMLVVDSWRAMP 333
RA V W+A P
Sbjct: 878 RAKGAVKLWKAKP 890
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N +K AA+ LA D G
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAEN--------VKEAAKWYQLA-ADQGF------ 749
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 750 ----APAQYR--------IGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFA 797
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 798 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 857
Query: 269 GKA 271
A
Sbjct: 858 KDA 860
>gi|184157593|ref|YP_001845932.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ACICU]
gi|332875404|ref|ZP_08443231.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|384131681|ref|YP_005514293.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii 1656-2]
gi|384142677|ref|YP_005525387.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii MDR-ZJ06]
gi|385237000|ref|YP_005798339.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TCDC-AB0715]
gi|387124446|ref|YP_006290328.1| hypothetical protein ABTJ_02436 [Acinetobacter baumannii MDR-TJ]
gi|407932324|ref|YP_006847967.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TYTH-1]
gi|416150025|ref|ZP_11603177.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AB210]
gi|417568273|ref|ZP_12219136.1| Sel1 repeat protein [Acinetobacter baumannii OIFC189]
gi|417578638|ref|ZP_12229471.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|417872970|ref|ZP_12517853.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ABNIH2]
gi|417878898|ref|ZP_12523492.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ABNIH3]
gi|417883311|ref|ZP_12527562.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ABNIH4]
gi|421203753|ref|ZP_15660888.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AC12]
gi|421533792|ref|ZP_15980072.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AC30]
gi|421630484|ref|ZP_16071189.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|421687120|ref|ZP_16126849.1| Sel1 repeat protein [Acinetobacter baumannii IS-143]
gi|421703123|ref|ZP_16142590.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ZWS1122]
gi|421706844|ref|ZP_16146247.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ZWS1219]
gi|421792784|ref|ZP_16228931.1| Sel1 repeat protein [Acinetobacter baumannii Naval-2]
gi|424052877|ref|ZP_17790409.1| hypothetical protein W9G_01566 [Acinetobacter baumannii Ab11111]
gi|424064364|ref|ZP_17801849.1| hypothetical protein W9M_01647 [Acinetobacter baumannii Ab44444]
gi|425755139|ref|ZP_18872961.1| Sel1 repeat protein [Acinetobacter baumannii Naval-113]
gi|445464129|ref|ZP_21449512.1| Sel1 repeat protein [Acinetobacter baumannii OIFC338]
gi|445478326|ref|ZP_21454652.1| Sel1 repeat protein [Acinetobacter baumannii Naval-78]
gi|183209187|gb|ACC56585.1| TPR repeat, SEL1 subfamily protein [Acinetobacter baumannii ACICU]
gi|322507901|gb|ADX03355.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii 1656-2]
gi|323517497|gb|ADX91878.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TCDC-AB0715]
gi|332736387|gb|EGJ67387.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|333364148|gb|EGK46162.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AB210]
gi|342230943|gb|EGT95763.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ABNIH3]
gi|342232775|gb|EGT97546.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ABNIH2]
gi|342236021|gb|EGU00569.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ABNIH4]
gi|347593170|gb|AEP05891.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii MDR-ZJ06]
gi|385878938|gb|AFI96033.1| TPR repeat-containing protein [Acinetobacter baumannii MDR-TJ]
gi|395554568|gb|EJG20570.1| Sel1 repeat protein [Acinetobacter baumannii OIFC189]
gi|395567776|gb|EJG28450.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|398326797|gb|EJN42940.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AC12]
gi|404565967|gb|EKA71129.1| Sel1 repeat protein [Acinetobacter baumannii IS-143]
gi|404670955|gb|EKB38824.1| hypothetical protein W9G_01566 [Acinetobacter baumannii Ab11111]
gi|404673458|gb|EKB41250.1| hypothetical protein W9M_01647 [Acinetobacter baumannii Ab44444]
gi|407192959|gb|EKE64132.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ZWS1122]
gi|407193243|gb|EKE64411.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ZWS1219]
gi|407900905|gb|AFU37736.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TYTH-1]
gi|408697644|gb|EKL43152.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|409988245|gb|EKO44418.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AC30]
gi|410399068|gb|EKP51267.1| Sel1 repeat protein [Acinetobacter baumannii Naval-2]
gi|425495181|gb|EKU61370.1| Sel1 repeat protein [Acinetobacter baumannii Naval-113]
gi|444774888|gb|ELW98960.1| Sel1 repeat protein [Acinetobacter baumannii Naval-78]
gi|444780025|gb|ELX03997.1| Sel1 repeat protein [Acinetobacter baumannii OIFC338]
Length = 302
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G G KN KA + F K AA+ + A G++Y E D K+A Y +
Sbjct: 121 GAYYANGDGGVKNYQKAFEWFSKAAAQDNAEAKYYLGILYEEGYGVTQDYKKA-FEWYSK 179
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKL-------LY-QASIAGHVRAQYQLALCLHRGRGVD 214
AA Q NL Y Q + V+L LY +A+ G+ +AQ L G GV+
Sbjct: 180 AAAQNYTDAQNNLAALYAQGKGVELNNKKAFELYSKAAEQGNEKAQNNLGAIYALGIGVN 239
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AA+ A + + Y GEG+ ++ A KW+++AA+ G+ A
Sbjct: 240 QDYKKAFEWYSKAAQQENDEAQFTVGMMYYKGEGVQQNNELAEKWLRKAAENGNKDA--- 296
Query: 275 HGLGLFTE 282
L LF E
Sbjct: 297 --LSLFEE 302
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q LG Y++ + V Y+ A+ G+ AQ L G+GV+ N +
Sbjct: 40 GDAGAQAKLGELYVEGQVVPQDYKKAFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNYK 99
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G V+A N Y+ G+G ++++A +W +AA + +A+ G+
Sbjct: 100 KAFEWYSKAAEQGEVKAQNNLGAYYANGDGGVKNYQKAFEWFSKAAAQDNAEAKYYLGI- 158
Query: 279 LFTEG 283
L+ EG
Sbjct: 159 LYEEG 163
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCL 207
A Y +AA G+ Q NLG Y + V+ Y+ A+ G V+AQ L
Sbjct: 65 AFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNYKKAFEWYSKAAEQGEVKAQNNLGAYY 124
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G N Q+A W+ +AA A Y + Y G G+ +++A +W +AA
Sbjct: 125 ANGDGGVKNYQKAFEWFSKAAAQDNAEAKYYLGILYEEGYGVTQDYKKAFEWYSKAAAQN 184
Query: 268 HGKAQLEHGLGLFTEGE--MMKAVVYLELATRAGETAADHVKNVI 310
+ AQ + L+ +G+ + EL ++A E + +N +
Sbjct: 185 YTDAQ-NNLAALYAQGKGVELNNKKAFELYSKAAEQGNEKAQNNL 228
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
+G AQ +L G+ V + ++A WY +AA G A N Y+ G+G+ ++
Sbjct: 39 SGDAGAQAKLGELYVEGQVVPQDYKKAFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNY 98
Query: 254 RQARKWMKRAADCGHGKAQLEHGLGLF 280
++A +W +AA+ G KAQ + LG +
Sbjct: 99 KKAFEWYSKAAEQGEVKAQ--NNLGAY 123
>gi|189502614|ref|YP_001958331.1| hypothetical protein Aasi_1288 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498055|gb|ACE06602.1| hypothetical protein Aasi_1288 [Candidatus Amoebophilus asiaticus
5a2]
Length = 731
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + + V ++ KA++S K A +G+ +A + G MY + +E AI +
Sbjct: 545 GIMYLNDESVERDDQKAVESLKKEAEQGNAVAQRNLGFMY--QNGREGLPQDNRLAIEWF 602
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++A G GQ NL Y EA K +A+ GH AQ +L G+G
Sbjct: 603 IKSAEQGYVYGQTNLAWMYYNSKGTARNYHEAFKWYQKAADQGHPNAQCRLGWMYQNGKG 662
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
V + +A WY +AAE G+ +A ++ Y +G G+ ++ +A +W ++AA+ G
Sbjct: 663 VRKDHTKAFEWYEKAAEQGHEKAQFDLGEIYQYGWGVAENYNKALEWYRKAAENG 717
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 15/147 (10%)
Query: 144 GLMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISY------LQEE---AVKLLY 189
G+MY E D ++A SL ++A G+ Q NLG Y L ++ A++
Sbjct: 545 GIMYLNDESVERDDQKAVESLKKEAEQ-GNAVAQRNLGFMYQNGREGLPQDNRLAIEWFI 603
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
+++ G+V Q LA + +G N EA +WY +AA+ G+ A Y G+G+
Sbjct: 604 KSAEQGYVYGQTNLAWMYYNSKGTARNYHEAFKWYQKAADQGHPNAQCRLGWMYQNGKGV 663
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHG 276
H +A +W ++AA+ GH KAQ + G
Sbjct: 664 RKDHTKAFEWYEKAAEQGHEKAQFDLG 690
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEM-DKKEAAISLYR 161
R G +++G+GVRK+ KA + + K A +G A D G +Y W + + A+ YR
Sbjct: 652 RLGWMYQNGKGVRKDHTKAFEWYEKAAEQGHEKAQFDLGEIYQYGWGVAENYNKALEWYR 711
Query: 162 QAAVLGDPA 170
+AA GD A
Sbjct: 712 KAAENGDQA 720
>gi|398824728|ref|ZP_10583049.1| Sel1 repeat protein [Bradyrhizobium sp. YR681]
gi|398224595|gb|EJN10896.1| Sel1 repeat protein [Bradyrhizobium sp. YR681]
Length = 1133
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
G++ +EA K +A+ AG V A ++L +G GV + A R+Y +AAE G +A
Sbjct: 932 GVAANYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKKDADTARRYYTQAAERGNAKA 991
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 291
M+N ++ + G G +++ A +W ++AAD G +Q G+ G+ E + ++ +
Sbjct: 992 MHNLAVLDADGGGRGANYKSAAQWFRKAADRGVADSQFNLGILYARGIGVEQNLAESYKW 1051
Query: 292 LELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 333
LA G+ A ++ + ++L S A L + ++ A P
Sbjct: 1052 FSLAAAQGDADASGKRDDVAKRLDPQSLAAAKLAIQTFSAEP 1093
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G RF G+GV N D+A + + A G A G +Y
Sbjct: 924 GVRFAEGKGVAANYDEAAKWYDRAAQAGVVPATFRLGTLY-------------------- 963
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
+ LG+ + A + QA+ G+ +A + LA+ G G N + AA+W+ +A
Sbjct: 964 ----EKGLGVKKDADTARRYYTQAAERGNAKAMHNLAVLDADGGGRGANYKSAAQWFRKA 1019
Query: 228 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
A+ G + +N + Y+ G G+ + ++ KW AA G A
Sbjct: 1020 ADRGVADSQFNLGILYARGIGVEQNLAESYKWFSLAAAQGDADA 1063
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y++ + G+GV N EAA+WY RAA+ G V A + Y G G+ AR++
Sbjct: 921 YEIGVRFAEGKGVAANYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKKDADTARRYY 980
Query: 261 KRAADCGHGKAQLEHGLGLF 280
+AA+ G+ KA H L +
Sbjct: 981 TQAAERGNAKAM--HNLAVL 998
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 33/131 (25%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISLY 160
R G ++ G GV+K+ D A + + A RG+ AM + ++ + + ++A +
Sbjct: 957 FRLGTLYEKGLGVKKDADTARRYYTQAAERGNAKAMHNLAVLDADGGGRGANYKSAAQWF 1016
Query: 161 RQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 220
R+AA G QFNLGI Y RG GV+ NL E+
Sbjct: 1017 RKAADRGVADSQFNLGILYA----------------------------RGIGVEQNLAES 1048
Query: 221 ARWY-LRAAEG 230
+W+ L AA+G
Sbjct: 1049 YKWFSLAAAQG 1059
>gi|422763472|ref|ZP_16817227.1| Sel1 [Escherichia coli E1167]
gi|324116718|gb|EGC10633.1| Sel1 [Escherichia coli E1167]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL------GISYLQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF-NLQEAARWYLRAAEGGY 232
NL I + E A K G AQY + +R +D + ++A W AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFHWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 119
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 120 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|332295410|ref|YP_004437333.1| serine/threonine protein kinase [Thermodesulfobium narugense DSM
14796]
gi|332178513|gb|AEE14202.1| serine/threonine protein kinase [Thermodesulfobium narugense DSM
14796]
Length = 582
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAA 156
VL G ++ G GV +N D A F + + +G+ A+ GLMY ++ DK A
Sbjct: 371 VLFEIGLKYLLGFGVTRNFDIAFKCFREASGKGNVEALYRLGLMYLHGQGTYQDDK--MA 428
Query: 157 ISLYRQAAVLGDPAGQFNLGISY------LQEE--AVKLLYQASIAGHVRAQYQLALCLH 208
++ A+ G+ + LG Y Q++ A K AS G+ A Y L L
Sbjct: 429 FKYFKDASEKGNADAMYRLGWMYEYGRGTSQDDKMAFKYFKDASEKGNADAMYHLGLMYL 488
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G+G + + A +++ A+E G AMY Y +G G + A+ W +++ D G+
Sbjct: 489 HGQGTYQDDKMAFKYFKDASEKGNADAMYRLGWMYEYGRGTSQDDKMAKYWYEKSKDLGN 548
Query: 269 --GKAQLEHGL 277
K +LE L
Sbjct: 549 IDSKNKLESFL 559
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 168 DPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
DP F +G+ YL + A K +AS G+V A Y+L L G+G + +
Sbjct: 368 DPKVLFEIGLKYLLGFGVTRNFDIAFKCFREASGKGNVEALYRLGLMYLHGQGTYQDDKM 427
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----- 274
A +++ A+E G AMY Y +G G + A K+ K A++ G+ A
Sbjct: 428 AFKYFKDASEKGNADAMYRLGWMYEYGRGTSQDDKMAFKYFKDASEKGNADAMYHLGLMY 487
Query: 275 -HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
HG G + + +M A Y + A+ G A + + + TS+D M
Sbjct: 488 LHGQGTYQDDKM--AFKYFKDASEKGNADAMYRLGWMYEYGRGTSQDDKM 535
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 87 VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V ++++ A + REA L R G + HG+G ++ A F + +G+ AM
Sbjct: 385 VTRNFDIAFKCFREASGKGNVEALYRLGLMYLHGQGTYQDDKMAFKYFKDASEKGNADAM 444
Query: 141 VDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEE--------AVKL 187
G MY D K A ++ A+ G+ ++LG+ YL + A K
Sbjct: 445 YRLGWMYEYGRGTSQDDK-MAFKYFKDASEKGNADAMYHLGLMYLHGQGTYQDDKMAFKY 503
Query: 188 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
AS G+ A Y+L GRG + + A WY ++ + G + +
Sbjct: 504 FKDASEKGNADAMYRLGWMYEYGRGTSQDDKMAKYWYEKSKDLGNIDS 551
>gi|265992772|ref|ZP_06105329.1| peptidoglycan binding domain-containing protein [Brucella
melitensis bv. 3 str. Ether]
gi|262763642|gb|EEZ09674.1| peptidoglycan binding domain-containing protein [Brucella
melitensis bv. 3 str. Ether]
Length = 978
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G AQY++
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIG 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+G G+ NL++A WY AA+ G AM+N ++ ++ G + A +W AA
Sbjct: 758 SFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 817
Query: 265 DCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 320
+ G +Q G+ GL + ++ + LA AG+ A ++ I + L
Sbjct: 818 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDAAEKRDQIAKALKPEMLT 877
Query: 321 RAMLVVDSWRAMP 333
RA V W+A P
Sbjct: 878 RAKGAVKLWKAKP 890
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N +K AA+ LA D G
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAEN--------VKEAAKWYQLA-ADQGF------ 749
Query: 152 KKEAAISLYRQAAVLGDPAGQFN---LGISYLQEEAVKLLYQASIAGHVRAQYQLALCLH 208
A + YR G FN LG++ E+A A+ G+ A + LA+
Sbjct: 750 ----APAQYR--------IGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFA 797
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G + A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G
Sbjct: 798 TGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGD 857
Query: 269 GKA 271
A
Sbjct: 858 KDA 860
>gi|150005685|ref|YP_001300429.1| hypothetical protein BVU_3175 [Bacteroides vulgatus ATCC 8482]
gi|149934109|gb|ABR40807.1| TPR repeat protein [Bacteroides vulgatus ATCC 8482]
Length = 307
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 30/192 (15%)
Query: 87 VCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K ++ A + L +A + G +K+G GVRK+ A+ +L+ A G+T AM
Sbjct: 118 VTKDYSQAFKWLNKAATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAM 177
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQ 200
+ G +Y + LG+ EEA +A+ + AQ
Sbjct: 178 NNIGYLY------------------------KNGLGVPQDFEEAFFWFKKAADKNNPIAQ 213
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y + G G++ + + A W +AA G A YN Y +G+G+ +QAR W
Sbjct: 214 YNIGNMYCYGEGMEKDFAKGAEWLTKAALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWF 273
Query: 261 KRAADCGHGKAQ 272
++A D GH KA+
Sbjct: 274 QKAIDNGHEKAK 285
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 93/235 (39%), Gaps = 16/235 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + AA G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQASIA-GHVRAQYQLALCLHRGRGVDF 215
A G+P Q +G Y V+ Y S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPQ 192
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +EA W+ +AA+ A YN Y +GEG+ + +W+ +AA G+ AQ
Sbjct: 193 DFEEAFFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAEWLTKAALQGNAPAQYNL 252
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 326
G G E ++ +A + + A G A I LS + +L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSKEDTEAPLLFT 307
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQY +G G + + +A + + ++A GG A N Y++G G+ + QA
Sbjct: 67 HAQYLTGDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAF 126
Query: 258 KWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 294
KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 127 KWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|83310461|ref|YP_420725.1| TPR repeat-containing SEL1 subfamily protein [Magnetospirillum
magneticum AMB-1]
gi|82945302|dbj|BAE50166.1| TPR repeat SEL1 subfamily [Magnetospirillum magneticum AMB-1]
Length = 393
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 86/187 (45%), Gaps = 28/187 (14%)
Query: 97 PLREAMV---LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
PL E V LR G+ +R +DK G AMV G Y E
Sbjct: 126 PLPEIEVETDPLRIGETIDDPVALRAAVDK-----------GDLAAMVALGNAYREGKGV 174
Query: 150 -MDKKEAAISLYRQAAVLGDPAGQFNLGISY--------LQEEAVKLLYQASIAGHVRAQ 200
+D EA + LY AA GD GQ++LG+ Y A+K +A+ G +AQ
Sbjct: 175 AVDPAEA-VRLYTLAAKAGDARGQYSLGVMYDLGLGVAQSNAHALKWFREAAKQGDPQAQ 233
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
+ L + +GRGV+ + + AA+W+ +AAE G A++ Y G G+ QA +
Sbjct: 234 FNLGNMIQQGRGVESSAEVAAKWFKQAAEQGDAGAIFALGALYEAGTGVERDEIQAVELY 293
Query: 261 KRAADCG 267
++AAD G
Sbjct: 294 RQAADQG 300
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV ++ AL F + A +G A + G M + E A ++QA
Sbjct: 201 GVMYDLGLGVAQSNAHALKWFREAAKQGDPQAQFNLGNMIQQGRGVESSAEVAAKWFKQA 260
Query: 164 AVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD F LG Y + +AV+L QA+ G A + LA L +GRG D
Sbjct: 261 AEQGDAGAIFALGALYEAGTGVERDEIQAVELYRQAADQGLALALHNLANMLRQGRGTDA 320
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH--GKAQL 273
+ EAA RAAE G A YN + + G G+ + A +W +RAA G G+AQ
Sbjct: 321 DPFEAAMLCRRAAEQGLPEAQYNYAAMLALGLGVEKNEDAAIRWFRRAAKSGDPRGEAQA 380
Query: 274 E 274
E
Sbjct: 381 E 381
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAA 156
AMV L G ++ G+GV + +A+ + A G G+MY A
Sbjct: 160 AMVAL--GNAYREGKGVAVDPAEAVRLYTLAAKAGDARGQYSLGVMYDLGLGVAQSNAHA 217
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLH 208
+ +R+AA GDP QFNLG Q E A K QA+ G A + L
Sbjct: 218 LKWFREAAKQGDPQAQFNLGNMIQQGRGVESSAEVAAKWFKQAAEQGDAGAIFALGALYE 277
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GV+ + +A Y +AA+ G A++N + G G +A +RAA+ G
Sbjct: 278 AGTGVERDEIQAVELYRQAADQGLALALHNLANMLRQGRGTDADPFEAAMLCRRAAEQGL 337
Query: 269 GKAQLEH----GLGLFTEGEMMKAVVYLELATRAGE 300
+AQ + LGL E A+ + A ++G+
Sbjct: 338 PEAQYNYAAMLALGLGVEKNEDAAIRWFRRAAKSGD 373
>gi|417560513|ref|ZP_12211392.1| Sel1 repeat protein [Acinetobacter baumannii OIFC137]
gi|421197915|ref|ZP_15655084.1| Sel1 repeat protein [Acinetobacter baumannii OIFC109]
gi|421455926|ref|ZP_15905269.1| Sel1 repeat protein [Acinetobacter baumannii IS-123]
gi|421633123|ref|ZP_16073766.1| Sel1 repeat protein [Acinetobacter baumannii Naval-13]
gi|421803573|ref|ZP_16239488.1| Sel1 repeat protein [Acinetobacter baumannii WC-A-694]
gi|395523095|gb|EJG11184.1| Sel1 repeat protein [Acinetobacter baumannii OIFC137]
gi|395566421|gb|EJG28064.1| Sel1 repeat protein [Acinetobacter baumannii OIFC109]
gi|400211024|gb|EJO41987.1| Sel1 repeat protein [Acinetobacter baumannii IS-123]
gi|408707842|gb|EKL53125.1| Sel1 repeat protein [Acinetobacter baumannii Naval-13]
gi|410412776|gb|EKP64627.1| Sel1 repeat protein [Acinetobacter baumannii WC-A-694]
Length = 230
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G+ + G+ V ++ KA + + K A +G++ A + G MY E + K+A Y +
Sbjct: 49 GELYVEGQVVPQDYKKAFEWYSKAANQGNSEAQNNLGAMYALGQGVEQNYKKA-FEWYSK 107
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA G+ Q NLG Y ++A + +A+ + A+Y L + G GV
Sbjct: 108 AAEQGEVKAQNNLGAYYANGDGGVKNYQKAFEWYSKAAAQDNAEAKYYLGILYEEGYGVT 167
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AA+ A + + Y GEG+ ++ A KW+++AA+ G+ A
Sbjct: 168 QDYKKAFEWYSKAAQQENDEAQFTVGMMYYKGEGVQQNNELAEKWLRKAAENGNKDA--- 224
Query: 275 HGLGLFTE 282
L LF E
Sbjct: 225 --LSLFEE 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q LG Y++ + V Y+ A+ G+ AQ L G+GV+ N +
Sbjct: 40 GDAGAQAKLGELYVEGQVVPQDYKKAFEWYSKAANQGNSEAQNNLGAMYALGQGVEQNYK 99
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G V+A N Y+ G+G ++++A +W +AA + +A+ G+
Sbjct: 100 KAFEWYSKAAEQGEVKAQNNLGAYYANGDGGVKNYQKAFEWYSKAAAQDNAEAKYYLGI- 158
Query: 279 LFTEG 283
L+ EG
Sbjct: 159 LYEEG 163
>gi|417637968|ref|ZP_12288138.1| hypothetical protein ECTX1999_0671 [Escherichia coli TX1999]
gi|419168624|ref|ZP_13713021.1| sel1 repeat family protein [Escherichia coli DEC7A]
gi|419179618|ref|ZP_13723243.1| sel1 repeat family protein [Escherichia coli DEC7C]
gi|419185180|ref|ZP_13728702.1| sel1 repeat family protein [Escherichia coli DEC7D]
gi|419190426|ref|ZP_13733894.1| sel1 repeat family protein [Escherichia coli DEC7E]
gi|420384273|ref|ZP_14883659.1| sel1 repeat family protein [Escherichia coli EPECa12]
gi|345395261|gb|EGX25010.1| hypothetical protein ECTX1999_0671 [Escherichia coli TX1999]
gi|378018489|gb|EHV81346.1| sel1 repeat family protein [Escherichia coli DEC7A]
gi|378028079|gb|EHV90704.1| sel1 repeat family protein [Escherichia coli DEC7C]
gi|378032598|gb|EHV95179.1| sel1 repeat family protein [Escherichia coli DEC7D]
gi|378042529|gb|EHW04978.1| sel1 repeat family protein [Escherichia coli DEC7E]
gi|391309109|gb|EIQ66786.1| sel1 repeat family protein [Escherichia coli EPECa12]
Length = 327
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 GQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL Y Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 71 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 127
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 187
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 141 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 200
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 201 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 260
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 261 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 301
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 12 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 63
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 64 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 121
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 122 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 156
>gi|443616681|ref|YP_007380537.1| hypothetical protein APECO78_06800 [Escherichia coli APEC O78]
gi|443421189|gb|AGC86093.1| hypothetical protein APECO78_06800 [Escherichia coli APEC O78]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL Y Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 16/172 (9%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQA 163
+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+ A
Sbjct: 70 QKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQIA 126
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 127 AESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQ 186
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 187 NETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 62 CEAQYSLEQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 119
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 120 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|315223817|ref|ZP_07865665.1| TPR repeat protein [Capnocytophaga ochracea F0287]
gi|314946147|gb|EFS98148.1| TPR repeat protein [Capnocytophaga ochracea F0287]
Length = 278
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCL 207
A++ Y +AA GD Q LG+ Y + V Y+ A+ G+ AQ +L +C
Sbjct: 74 AVAWYEKAAKQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCY 133
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
H+G+GV + ++A W+ +AA+ + A CY G G+ S A W ++AA+ G
Sbjct: 134 HKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQG 193
Query: 268 HGKAQLEHGLGLF----TEGEMMKAVVYLELATRAGETAADHV 306
+AQ G F KA+ + E A G+ A +
Sbjct: 194 DVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTI 236
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F G+SY Q E K L + + G + AQ +LA +G GV + +A WY +AA+ G
Sbjct: 27 FFFGMSYSQREDFKTLIEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAKQGD 86
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
V++ LCY + +G+ S+ +A W ++AA+ G+ +AQ + G+
Sbjct: 87 VKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV 131
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 213
+ A GD Q L +Y + +AV +A+ G V++Q +L LC + +GV
Sbjct: 44 EKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAKQGDVKSQTKLGLCYYYRKGV 103
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ ++AA W+ +AAE GY A +CY G+G+ S QA W ++AAD +AQ
Sbjct: 104 VQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQS 163
Query: 274 EHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
G GL AV++ E A G+ A
Sbjct: 164 FLGYCYYKGLGVAQSDSDAVLWYEKAANQGDVEA 197
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 77/207 (37%), Gaps = 48/207 (23%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
+R ++ G GV ++ KA+ + K A +G + GL Y+ + E A +
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVAWYEKAAKQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWF 114
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA G Q LG+ Y + E+AV +A+ AQ L C ++G G
Sbjct: 115 QKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLG 174
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTS-------------------------------- 240
V + +A WY +AA G V A N
Sbjct: 175 VAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQ 234
Query: 241 ----LCYSFGEGLPLSHRQARKWMKRA 263
CY G G+ S ++A W ++
Sbjct: 235 TILGFCYYAGTGVDKSQKRAIYWFEKG 261
>gi|432859380|ref|ZP_20085451.1| hypothetical protein A311_01170 [Escherichia coli KTE146]
gi|431408019|gb|ELG91216.1| hypothetical protein A311_01170 [Escherichia coli KTE146]
Length = 327
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ ++A+ K A +G TLA G W +D+ E A++ Y+
Sbjct: 71 GRKYSEDKSRHKDNEQAIFWLKKAALQGHTLASNALG---WILDRGEDPNYKEAVAWYQI 127
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGCMYRNGNGVAKDYALAFFWYKQAALQGHSYAQDNLADLYEDGKGVA 187
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVAWYQIAAESGMSYAQNNLGCMYRNGNGVAKDYALAFFWYKQAALQGHSY 171
Query: 171 GQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G++ + A +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQDNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFMKAAECNDATA 280
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + K A Y ++
Sbjct: 141 GCMYRNGNGVAKDYALAFFWYKQAALQGHSYAQDNLADLYEDGKGVAQNKTLAAFWYLKS 200
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 201 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 260
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+++AAE A YN ++ Y +GEG P+ RQA
Sbjct: 261 DYQAAFEWFMKAAECNDATAWYNLAIMYHYGEGRPVDIRQA 301
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 253
G AQY + +R +D E A ++L+ AAE G+ A Y+ YS + +
Sbjct: 25 GDSEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGRKYSEDKSRHKDN 84
Query: 254 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 309
QA W+K+AA GH A + LG + GE +AV + ++A +G + A +
Sbjct: 85 EQAIFWLKKAALQGHTLA--SNALGWILDRGEDPNYKEAVAWYQIAAESGMSYAQNNLGC 142
Query: 310 ILQQLSATSRDRAM 323
+ + + ++D A+
Sbjct: 143 MYRNGNGVAKDYAL 156
>gi|432673620|ref|ZP_19909115.1| hypothetical protein A1YU_00172 [Escherichia coli KTE142]
gi|431217952|gb|ELF15438.1| hypothetical protein A1YU_00172 [Escherichia coli KTE142]
Length = 327
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 GQFNL------GISYLQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 71 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 127
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 187
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 141 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 200
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 201 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 260
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 261 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 301
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 12 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 63
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 64 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 121
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 122 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 156
>gi|195331395|ref|XP_002032388.1| GM23543 [Drosophila sechellia]
gi|194121331|gb|EDW43374.1| GM23543 [Drosophila sechellia]
Length = 818
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ +++ KAL+ F A G+ + G +Y E ++ +AA + +AA
Sbjct: 344 YQGGKVTQQDHQKALEYFKMAATAGNAVGFAFLGKLYLEGSEQIKADNDAAFGYFSKAAE 403
Query: 166 LGDPAGQFNLGISYLQ-----EEAVKLL---YQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+GDP GQ LG+ YL+ ++++K L QA+ G V Q QL G GV +
Sbjct: 404 MGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGNMYFTGNGVKIDY 463
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ A +++ A + G+V A YN + ++G G+ S A ++ K ++ G
Sbjct: 464 KLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERG 513
>gi|191168687|ref|ZP_03030467.1| hypothetical protein EcB7A_4052 [Escherichia coli B7A]
gi|190901279|gb|EDV61048.1| hypothetical protein EcB7A_4052 [Escherichia coli B7A]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL------GISYLQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGKPVDLRQA 299
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 119
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 120 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|193069119|ref|ZP_03050077.1| hypothetical protein EcE110019_3243 [Escherichia coli E110019]
gi|419863489|ref|ZP_14386017.1| Sel1 domain-containing protein repeat-containing protein
[Escherichia coli O103:H25 str. CVM9340]
gi|192957663|gb|EDV88108.1| hypothetical protein EcE110019_3243 [Escherichia coli E110019]
gi|388342372|gb|EIL08407.1| Sel1 domain-containing protein repeat-containing protein
[Escherichia coli O103:H25 str. CVM9340]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL------GISYLQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 119
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 120 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|427803717|ref|ZP_18970784.1| hypothetical protein BN16_11231 [Escherichia coli chi7122]
gi|427808308|ref|ZP_18975373.1| hypothetical protein BN17_04311 [Escherichia coli]
gi|412961899|emb|CCK45810.1| hypothetical protein BN16_11231 [Escherichia coli chi7122]
gi|412968487|emb|CCJ43110.1| hypothetical protein BN17_04311 [Escherichia coli]
Length = 327
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 GQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL Y Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 16/172 (9%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQA 163
+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+ A
Sbjct: 72 QKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQIA 128
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDF 215
A G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 129 AESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQ 188
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 189 NETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 141 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 200
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 201 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 260
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 261 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 301
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 12 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 63
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 64 CEAQYSLEQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 121
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 122 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 156
>gi|290989033|ref|XP_002677163.1| Sel1 repeat domain-containing protein [Naegleria gruberi]
gi|284090769|gb|EFC44419.1| Sel1 repeat domain-containing protein [Naegleria gruberi]
Length = 630
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGD 168
H +G N KA + K A + A + G++Y + + E A Y +AA
Sbjct: 58 HDKG---NYSKAFEWTEKAAHQDYPEAQFNVGVLYEKGEGIEQSNTKAFEWYEKAANHNL 114
Query: 169 PAGQFNLGISYLQEE--------AVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQE 219
Q+ LG ++ E A++ + +++ G+ AQ L +CL GV + Q+
Sbjct: 115 AIAQYKLGRLFMDGEEVEQSDELAIEWIKKSAENGNFLAQNTLGNICLEGEYGVKQSYQD 174
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+ RW+ +AA+ G+ A YN L Y GEG + S+ +A KW K +A+ G+ +Q + L
Sbjct: 175 SKRWFKQAAKQGFAMAQYNLGLLYKNGEGDISQSYSKALKWFKLSAEQGYNASQ--YNLA 232
Query: 279 LFTE---GEMMKAVVYLELATRAGETAA 303
+ E GE AV Y A + G + A
Sbjct: 233 ILYEQVFGEFQLAVKYYTKAAKKGNSGA 260
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEA 155
A+ + G+ F G V ++ + A++ K A G+ LA G + E + +
Sbjct: 115 AIAQYKLGRLFMDGEEVEQSDELAIEWIKKSAENGNFLAQNTLGNICLEGEYGVKQSYQD 174
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEE---------AVKLLYQASIAGHVRAQYQLALC 206
+ ++QAA G Q+NLG+ Y E A+K ++ G+ +QY LA+
Sbjct: 175 SKRWFKQAAKQGFAMAQYNLGLLYKNGEGDISQSYSKALKWFKLSAEQGYNASQYNLAIL 234
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY-SFGEGLPLSHRQARKWMKRAAD 265
+ G Q A ++Y +AA+ G A + Y S GEG+P S +AR++ + +A+
Sbjct: 235 YEQVFG---EFQLAVKYYTKAAKKGNSGAQCDLGCIYASGGEGIPQSFEKAREYFEMSAN 291
Query: 266 CGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 305
GH AQL G+ G E + +A+ + + R G A++
Sbjct: 292 QGHSDAQLNLGVMYLNGDGVEKDNEEAIKWFRKSARGGNEEANY 335
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLA 139
V +S+ D+ R ++A M G +K+G G + ++ KAL F A +G +
Sbjct: 168 VKQSYQDSKRWFKQAAKQGFAMAQYNLGLLYKNGEGDISQSYSKALKWFKLSAEQGYNAS 227
Query: 140 MVDAGLMYWEM-DKKEAAISLYRQAAVLGDPAGQFNLGISYLQ---------EEAVKLLY 189
+ ++Y ++ + + A+ Y +AA G+ Q +LG Y E+A +
Sbjct: 228 QYNLAILYEQVFGEFQLAVKYYTKAAKKGNSGAQCDLGCIYASGGEGIPQSFEKAREYFE 287
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 237
++ GH AQ L + G GV+ + +EA +W+ ++A GG A Y
Sbjct: 288 MSANQGHSDAQLNLGVMYLNGDGVEKDNEEAIKWFRKSARGGNEEANY 335
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 150 MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQE----EAVKLLYQASIAGHVRAQYQLAL 205
++K+ L + AV G+ QF L Y + +A + +A+ + AQ+ + +
Sbjct: 28 LEKQREEEELCEKLAVEGNAEYQFKLANLYHDKGNYSKAFEWTEKAAHQDYPEAQFNVGV 87
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+G G++ + +A WY +AA A Y + GE + S A +W+K++A+
Sbjct: 88 LYEKGEGIEQSNTKAFEWYEKAANHNLAIAQYKLGRLFMDGEEVEQSDELAIEWIKKSAE 147
Query: 266 CGHGKAQ 272
G+ AQ
Sbjct: 148 NGNFLAQ 154
>gi|309795488|ref|ZP_07689905.1| Sel1 repeat protein [Escherichia coli MS 145-7]
gi|308120863|gb|EFO58125.1| Sel1 repeat protein [Escherichia coli MS 145-7]
Length = 327
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 GQFNL------GISYLQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 71 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 127
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 187
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 141 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 200
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 201 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 260
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 261 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGKPVDLRQA 301
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 12 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 63
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 64 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 121
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 122 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 156
>gi|332281785|ref|ZP_08394198.1| conserved hypothetical protein [Shigella sp. D9]
gi|332104137|gb|EGJ07483.1| conserved hypothetical protein [Shigella sp. D9]
Length = 327
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 GQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL Y Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 71 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 127
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 187
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 141 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 200
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 201 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 260
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 261 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 301
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 12 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 63
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 64 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 121
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 122 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 156
>gi|261216267|ref|ZP_05930548.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
Tulya]
gi|260917874|gb|EEX84735.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
Tulya]
Length = 942
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 175 LGISYLQEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 233
+ I + EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G
Sbjct: 691 IEIPSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNA 750
Query: 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAV 289
AM+N ++ ++ G + A +W AA+ G +Q G+ GL + ++
Sbjct: 751 SAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESY 810
Query: 290 VYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 333
+ LA AG+ A ++ I + L RA V W+A P
Sbjct: 811 KWFALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVKLWKAKP 854
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLA 204
+EA + R+AA GD F +G Y++ +EA K A+ G+ A + LA
Sbjct: 698 EEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLA 757
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G + A RW+ AAE G + YN + + G G+P++ ++ KW AA
Sbjct: 758 VLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAA 817
Query: 265 DCGHGKA 271
+ G A
Sbjct: 818 NAGDKDA 824
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 38/144 (26%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-- 149
LREA L G R+ GRGV +N+ +A + A +G+ AM + +++
Sbjct: 705 LREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAMHNLAVLFATGT 764
Query: 150 --MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCL 207
AA+ + +AA LG Q+NLGI
Sbjct: 765 NGTPDNAAAVRWFTEAAELGVKDSQYNLGI----------------------------LA 796
Query: 208 HRGRGVDFNLQEAARWYLRAAEGG 231
+G G+ NL+E+ +W+ AA G
Sbjct: 797 AKGLGMPVNLEESYKWFALAANAG 820
>gi|423315265|ref|ZP_17293196.1| hypothetical protein HMPREF1058_03808 [Bacteroides vulgatus
CL09T03C04]
gi|392680282|gb|EIY73655.1| hypothetical protein HMPREF1058_03808 [Bacteroides vulgatus
CL09T03C04]
Length = 307
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 30/192 (15%)
Query: 87 VCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K ++ A + L +A + G +K+G GVRK+ A+ +L+ A G+T AM
Sbjct: 118 VTKDYSQAFKWLNKAATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAM 177
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQ 200
+ G +Y + LG+ EEA +A+ + AQ
Sbjct: 178 NNIGYLY------------------------KNGLGVPQDFEEAYFWFKKAADKNNPIAQ 213
Query: 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260
Y + G G++ + + A W +AA G A YN Y +G+G+ +QAR W
Sbjct: 214 YNIGNMYCYGEGMEKDFAKGAEWLTKAALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWF 273
Query: 261 KRAADCGHGKAQ 272
++A D GH KA+
Sbjct: 274 QKAIDNGHEKAK 285
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 93/235 (39%), Gaps = 16/235 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + AA G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAGQFNLGISYLQEEAVK-------LLYQASIA-GHVRAQYQLALCLHRGRGVDF 215
A G+P Q +G Y V+ Y S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPQ 192
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ +EA W+ +AA+ A YN Y +GEG+ + +W+ +AA G+ AQ
Sbjct: 193 DFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAEWLTKAALQGNAPAQYNL 252
Query: 276 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 326
G G E ++ +A + + A G A I LS + +L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSKEDTEDPLLFT 307
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 257
AQY +G G + + +A + + ++A GG A N Y++G G+ + QA
Sbjct: 67 HAQYLTGDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAF 126
Query: 258 KWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 294
KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 127 KWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|237746353|ref|ZP_04576833.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377704|gb|EEO27795.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 320
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 210 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 269
G+GV+ + RWY +AAE GY +A +N LCY FG G+ +A KW +++A+ H
Sbjct: 89 GQGVEKDASIGVRWYKKAAEQGYAKAQFNLGLCYQFGNGVKKDLNEAIKWFRKSAEQSHA 148
Query: 270 KAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
A+ + G G + +A+ + LA G+T+A + + Q + +D+
Sbjct: 149 DAEAKMGYLTVTGTGIRQDFQQAMKWYRLAAEHGDTSAYYQIGLFYAQGNGVKKDK 204
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEAAISL--YRQAAVLGDPAGQFNLGIS 178
+AL +L A+ M G MY + +K+A+I + Y++AA G QFNLG+
Sbjct: 62 EALTYYLTPDAQEKPEVMNRIGYMYDYGQGVEKDASIGVRWYKKAAEQGYAKAQFNLGLC 121
Query: 179 YL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y EA+K +++ H A+ ++ G G+ + Q+A +WY AAE
Sbjct: 122 YQFGNGVKKDLNEAIKWFRKSAEQSHADAEAKMGYLTVTGTGIRQDFQQAMKWYRLAAEH 181
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGE 284
G A Y L Y+ G G+ +A ++ A+ G +AQ E G G+ + E
Sbjct: 182 GDTSAYYQIGLFYAQGNGVKKDKNRAAQYYIMGAEKGDPEAQYWLGRAYEQGRGIKHDPE 241
Query: 285 MMKAVVYLELATRAGETAADHVKNVI 310
+A+ +L+ + G A +VI
Sbjct: 242 --RALYWLKQSANKGNWQAMRELSVI 265
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 22/218 (10%)
Query: 67 DVLNKIAASFTLPQ-LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKAL 125
+V+N+I + Q + + + W A G ++ G GV+K+L++A+
Sbjct: 77 EVMNRIGYMYDYGQGVEKDASIGVRWYKKAAEQGYAKAQFNLGLCYQFGNGVKKDLNEAI 136
Query: 126 DSFLKGA--------ARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177
F K A A+ L + G+ + A+ YR AA GD + + +G+
Sbjct: 137 KWFRKSAEQSHADAEAKMGYLTVTGTGIR----QDFQQAMKWYRLAAEHGDTSAYYQIGL 192
Query: 178 SYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y Q VK + G AQY L +GRG+ + + A W ++A
Sbjct: 193 FYAQGNGVKKDKNRAAQYYIMGAEKGDPEAQYWLGRAYEQGRGIKHDPERALYWLKQSAN 252
Query: 230 GGYVRAMYNTSLCY-SFGEGLPLSHRQARKWMKRAADC 266
G +AM S+ Y S G + + A +W ++A +
Sbjct: 253 KGNWQAMRELSVIYGSALLGQAIDEKLALQWGEKAEET 290
>gi|355778776|gb|EHH63812.1| hypothetical protein EGM_16858 [Macaca fascicularis]
Length = 796
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLA 204
E A+ +++AA +G+P GQ LG++YL V++ Y +A+ G V Q QL
Sbjct: 433 NETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLG 492
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
+ G GV + ++A +++ A++GG++ A YN + ++ G G+ S A + K
Sbjct: 493 SMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVC 552
Query: 265 DCGHGKAQLEHGLGLFTEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 317
+ G +L + +G+ AV+ YL LA + E A + IL Q AT
Sbjct: 553 ERGRWSERLMTAYNSYKDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 605
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 AV------------------LGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLA- 204
A L D + L+E+ ++ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG---LPLSHRQARKWMK 261
L LH GRGV+ N Q + + N L + EG +P S+ A + K
Sbjct: 382 LHLHGGRGVEQNHQVTTLFLGLCTSVIAGNDVLNIFLAEMYSEGSDIVPQSNETALHYFK 441
Query: 262 RAADCGHGKAQLEHGLGL 279
+AAD G+ Q GLG+
Sbjct: 442 KAADMGNPVGQ--SGLGM 457
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 65/172 (37%), Gaps = 35/172 (20%)
Query: 67 DVLNKIAA------SFTLPQLRAASL-VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRK 119
DVLN A S +PQ +L K D P+ ++ + G + +GRGV+
Sbjct: 412 DVLNIFLAEMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGL----GMAYLYGRGVQV 467
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY 179
N D AL F K A +G + G MY+ +G+
Sbjct: 468 NYDLALKYFQKAAEQGWVDGQLQLGSMYYN------------------------GIGVKR 503
Query: 180 LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231
++A+K AS GH+ A Y LA G GV + A + E G
Sbjct: 504 DYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 555
>gi|307312640|ref|ZP_07592272.1| Sel1 domain protein repeat-containing protein [Escherichia coli W]
gi|378713976|ref|YP_005278869.1| Sel1 domain-containing protein repeat-containing protein
[Escherichia coli KO11FL]
gi|386607982|ref|YP_006123468.1| hypothetical protein ECW_m0698 [Escherichia coli W]
gi|386702569|ref|YP_006166406.1| hypothetical protein KO11_20450 [Escherichia coli KO11FL]
gi|386708427|ref|YP_006172148.1| hypothetical protein WFL_03470 [Escherichia coli W]
gi|415827994|ref|ZP_11514716.1| hypothetical protein ECOK1357_1660 [Escherichia coli OK1357]
gi|417144332|ref|ZP_11986138.1| Sel1 repeat protein [Escherichia coli 1.2264]
gi|417230103|ref|ZP_12031689.1| Sel1 repeat protein [Escherichia coli 5.0959]
gi|417595576|ref|ZP_12246240.1| hypothetical protein EC30301_0703 [Escherichia coli 3030-1]
gi|425421292|ref|ZP_18802507.1| hypothetical protein EC01288_0664 [Escherichia coli 0.1288]
gi|432480036|ref|ZP_19722000.1| hypothetical protein A15U_01140 [Escherichia coli KTE210]
gi|432830610|ref|ZP_20064216.1| hypothetical protein A1YM_02415 [Escherichia coli KTE135]
gi|306907342|gb|EFN37847.1| Sel1 domain protein repeat-containing protein [Escherichia coli W]
gi|315059899|gb|ADT74226.1| conserved protein [Escherichia coli W]
gi|323185001|gb|EFZ70368.1| hypothetical protein ECOK1357_1660 [Escherichia coli OK1357]
gi|323379537|gb|ADX51805.1| Sel1 domain protein repeat-containing protein [Escherichia coli
KO11FL]
gi|345360098|gb|EGW92269.1| hypothetical protein EC30301_0703 [Escherichia coli 3030-1]
gi|383394096|gb|AFH19054.1| hypothetical protein KO11_20450 [Escherichia coli KO11FL]
gi|383404119|gb|AFH10362.1| hypothetical protein WFL_03470 [Escherichia coli W]
gi|386164215|gb|EIH26001.1| Sel1 repeat protein [Escherichia coli 1.2264]
gi|386206593|gb|EII11099.1| Sel1 repeat protein [Escherichia coli 5.0959]
gi|408347494|gb|EKJ61700.1| hypothetical protein EC01288_0664 [Escherichia coli 0.1288]
gi|431009885|gb|ELD24489.1| hypothetical protein A15U_01140 [Escherichia coli KTE210]
gi|431379859|gb|ELG64769.1| hypothetical protein A1YM_02415 [Escherichia coli KTE135]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL Y Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 119
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
VV+ ++A +G + A + + + + ++D A+
Sbjct: 120 VVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|218549781|ref|YP_002383572.1| hypothetical protein EFER_2462 [Escherichia fergusonii ATCC 35469]
gi|218357322|emb|CAQ89959.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ ++A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GRKYSEDKSCHKDNEQAIFWLKKAARQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAGQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y Q+ A L + QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWIYRNGNGVTQDYAQALFWYKQAALQGHSYAQDNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA
Sbjct: 186 QNKALAAFWYLKSAQQGNRHAQFQIAWDYNVGEGVDQDYKQAMYWYLKAA 235
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 84/198 (42%), Gaps = 22/198 (11%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAGQFNLGIS 178
++D ++ A +G + A G Y + E A + AA G Q++LG
Sbjct: 12 SIDEIIERAEKGDSEAQYIVGFYYNRDSAVDSPDDEKAFYWLKLAAEQGHCEAQYSLGRK 71
Query: 179 YLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230
Y + E+A+ L +A+ GH A L L RG D N +EA WY AAE
Sbjct: 72 YSEDKSCHKDNEQAIFWLKKAARQGHTFASNALGWILDRGE--DPNYKEAVVWYQIAAES 129
Query: 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGE 284
G A N Y G G+ + QA W K+AA GH AQ E G G+ + +
Sbjct: 130 GMSYAQNNLGWIYRNGNGVTQDYAQALFWYKQAALQGHSYAQDNLADLYEDGKGV-AQNK 188
Query: 285 MMKAVVYLELATRAGETA 302
+ A YL+ A + A
Sbjct: 189 ALAAFWYLKSAQQGNRHA 206
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPA 170
RG N +A+ + A G + A + G +Y + A+ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWIYRNGNGVTQDYAQALFWYKQAALQGHSY 169
Query: 171 GQFNLGISY------LQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL Y Q +A+ + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQDNLADLYEDGKGVAQNKALAAFWYLKSAQQGNRHAQFQIAWDYNVGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA V A N Y G+ + +++ A +W +AA+C + A
Sbjct: 230 WYLKAAAQESVDAYVNIGYMYKHGQSVEKNYQAAFEWFTKAAECDNATA 278
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV ++ +AL + + A +G + A + +Y + K A Y ++
Sbjct: 139 GWIYRNGNGVTQDYAQALFWYKQAALQGHSYAQDNLADLYEDGKGVAQNKALAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQ--------LALCLHRGRGVDF 215
A G+ QF + Y E V Y+ ++ +++A Q + G+ V+
Sbjct: 199 AQQGNRHAQFQIAWDYNVGEGVDQDYKQAMYWYLKAAAQESVDAYVNIGYMYKHGQSVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
N Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 NYQAAFEWFTKAAECDNATAWYNLAIMYHYGEGRPVDLRQA 299
>gi|410997042|gb|AFV98507.1| hypothetical protein B649_10980 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 227
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQAAVLGDPAGQFNLGI 177
++AL+ F A + + A+ G M+ + E ++ LY QAA L +PA +NL +
Sbjct: 15 NEALELFETLALQNNPTALSSLGYMHQKGLGVECSLERSFHLYAQAAELNEPAAIYNLAL 74
Query: 178 SYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
Y Q +A +LL +A++ +AQY+ AL L RG G N EAA WY AA+
Sbjct: 75 MYADGVVVAHDQFKAFELLLRAAVLEFPQAQYETALSLERGLGCAQNFSEAAFWYEEAAK 134
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
G A N + Y G G+ + +A RAA + Q GL
Sbjct: 135 RGNAHAFNNLGVLYKEGHGVLQDYPRAFICFSRAATMNLAEGQYNLGL 182
>gi|195573228|ref|XP_002104597.1| GD18357 [Drosophila simulans]
gi|194200524|gb|EDX14100.1| GD18357 [Drosophila simulans]
Length = 818
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ +++ KAL+ F A G+ + G +Y E ++ +AA + +AA
Sbjct: 344 YQGGKVTQQDHQKALEYFKMAATAGNAVGFAFLGKLYLEGSEQIKADNDAAFGYFSKAAE 403
Query: 166 LGDPAGQFNLGISYLQ-----EEAVKLL---YQASIAGHVRAQYQLALCLHRGRGVDFNL 217
+GDP GQ LG+ YL+ ++++K L QA+ G V Q QL G GV +
Sbjct: 404 MGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGNMYFTGNGVKIDY 463
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ A +++ A + G+V A YN + ++G G+ S A ++ K ++ G
Sbjct: 464 KLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERG 513
>gi|375134842|ref|YP_004995492.1| TPR repeat protein [Acinetobacter calcoaceticus PHEA-2]
gi|325122287|gb|ADY81810.1| TPR repeat protein [Acinetobacter calcoaceticus PHEA-2]
Length = 255
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 98/226 (43%), Gaps = 20/226 (8%)
Query: 103 VLLRWGKRFKHG-RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAA 156
VLL GK + G G ++ KAL+ FL A +GS LA MY D EA
Sbjct: 28 VLLDEGKDYFEGTNGKERDYAKALELFLVAAKQGSPLADARIAYMYQTGTGANQDYTEA- 86
Query: 157 ISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLH 208
+AA G+ Q+NL + Y A K QA++ G V AQ L L
Sbjct: 87 FKWNLKAANNGELQAQYNLALMYKDGLGTEKSDTNAFKWFKQAALQGDVSAQVNLGLMYQ 146
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GVD N+ +A WY AA A Y Y G + + A ++ ++AA +
Sbjct: 147 NGEGVDKNVDKAFFWYKSAAAQNDFMAFYYMGTFYEEGISVKKDEKLAFEYYRKAALLEY 206
Query: 269 GKAQLE----HGLGLFTEGEMMKAVV-YLELATRAGETAADHVKNV 309
G Q E + G+ T+ M KA+ Y + A R + A + +K +
Sbjct: 207 GIGQYELARCYEYGIGTDKNMSKAIEWYGKAAKRGSDEAIEKLKEL 252
>gi|88857844|ref|ZP_01132486.1| hypothetical protein PTD2_10679 [Pseudoalteromonas tunicata D2]
gi|88819461|gb|EAR29274.1| hypothetical protein PTD2_10679 [Pseudoalteromonas tunicata D2]
Length = 432
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
KEA+ S QA+ + L ++ ++++ L A+ H A + LA+ GRG
Sbjct: 63 KEASDSADAQASFIMATIYAKGLSVAPNVDQSISYLTYAAELKHPEAMFNLAVAFELGRG 122
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 272
V+ + +A WY +AAE ++ A +L Y G+G P+ +Q+ W K+AA+ G AQ
Sbjct: 123 VNKSASDAVGWYQKAAEADFLPAQRKLALMYEKGKGTPVDAKQSYFWYKKAAEAGQSYAQ 182
Query: 273 LEHGLGLFTEGEMMKAV----VYLELATRAGETAA 303
L+ G L + + K + ++E A ET A
Sbjct: 183 LKLGAILLQDKVVPKDIEAGLSWIEKAALQNETEA 217
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDK 152
L+ + F+ GRGV K+ A+ + K A A LMY + +D
Sbjct: 104 LKHPEAMFNLAVAFELGRGVNKSASDAVGWYQKAAEADFLPAQRKLALMYEKGKGTPVDA 163
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQASIAGHVRAQYQLA 204
K++ Y++AA G Q LG LQ++ V + +A++ AQ+ LA
Sbjct: 164 KQSYF-WYKKAAEAGQSYAQLKLGAILLQDKVVPKDIEAGLSWIEKAALQNETEAQFALA 222
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264
L R +D +L WY +AAE G AM+N + Y GE +PL ++ ++ K++
Sbjct: 223 TLLW-NRDIDKSL----YWYEKAAENGNSFAMHNLASIYLKGEKVPLDLDKSERYAKQSI 277
Query: 265 DCGHGKAQ 272
G ++
Sbjct: 278 ASGQTASE 285
>gi|417869514|ref|ZP_12514499.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ABNIH1]
gi|342230377|gb|EGT95217.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ABNIH1]
Length = 319
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G G KN KA + F K AA+ + A G++Y E D K+A Y +
Sbjct: 138 GAYYANGDGGVKNYQKAFEWFSKAAAQDNAEAKYYLGILYEEGYGVTQDYKKA-FEWYSK 196
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKL-------LY-QASIAGHVRAQYQLALCLHRGRGVD 214
AA Q NL Y Q + V+L LY +A+ G+ +AQ L G GV+
Sbjct: 197 AAAQNYTDAQNNLAALYAQGKGVELNNKKAFELYSKAAEQGNEKAQNNLGAIYALGIGVN 256
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AA+ A + + Y GEG+ ++ A KW+++AA+ G+ A
Sbjct: 257 QDYKKAFEWYSKAAQQENDEAQFTVGMMYYKGEGVQQNNELAEKWLRKAAENGNKDA--- 313
Query: 275 HGLGLFTE 282
L LF E
Sbjct: 314 --LSLFEE 319
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q LG Y++ + V Y+ A+ G+ AQ L G+GV+ N +
Sbjct: 57 GDAGAQAKLGELYVEGQVVPQDYKKAFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNYK 116
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G V+A N Y+ G+G ++++A +W +AA + +A+ G+
Sbjct: 117 KAFEWYSKAAEQGEVKAQNNLGAYYANGDGGVKNYQKAFEWFSKAAAQDNAEAKYYLGI- 175
Query: 279 LFTEG 283
L+ EG
Sbjct: 176 LYEEG 180
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCL 207
A Y +AA G+ Q NLG Y + V+ Y+ A+ G V+AQ L
Sbjct: 82 AFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNYKKAFEWYSKAAEQGEVKAQNNLGAYY 141
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G N Q+A W+ +AA A Y + Y G G+ +++A +W +AA
Sbjct: 142 ANGDGGVKNYQKAFEWFSKAAAQDNAEAKYYLGILYEEGYGVTQDYKKAFEWYSKAAAQN 201
Query: 268 HGKAQLEHGLGLFTEGE--MMKAVVYLELATRAGETAADHVKN 308
+ AQ + L+ +G+ + EL ++A E + +N
Sbjct: 202 YTDAQ-NNLAALYAQGKGVELNNKKAFELYSKAAEQGNEKAQN 243
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
+G AQ +L G+ V + ++A WY +AA G A N Y+ G+G+ ++
Sbjct: 56 SGDAGAQAKLGELYVEGQVVPQDYKKAFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNY 115
Query: 254 RQARKWMKRAADCGHGKAQLEHGLGLF 280
++A +W +AA+ G KAQ + LG +
Sbjct: 116 KKAFEWYSKAAEQGEVKAQ--NNLGAY 140
>gi|169796473|ref|YP_001714266.1| hypothetical protein ABAYE2436 [Acinetobacter baumannii AYE]
gi|213156414|ref|YP_002318834.1| Sel1 repeat family [Acinetobacter baumannii AB0057]
gi|215483937|ref|YP_002326162.1| Uncharacterized protein ybeQ [Acinetobacter baumannii AB307-0294]
gi|332854575|ref|ZP_08435427.1| Sel1 repeat protein [Acinetobacter baumannii 6013150]
gi|332868104|ref|ZP_08438009.1| Sel1 repeat protein [Acinetobacter baumannii 6013113]
gi|417574731|ref|ZP_12225585.1| Sel1 repeat protein [Acinetobacter baumannii Canada BC-5]
gi|421620009|ref|ZP_16060954.1| Sel1 repeat protein [Acinetobacter baumannii OIFC074]
gi|421644068|ref|ZP_16084553.1| Sel1 repeat protein [Acinetobacter baumannii IS-235]
gi|421648243|ref|ZP_16088650.1| Sel1 repeat protein [Acinetobacter baumannii IS-251]
gi|421660398|ref|ZP_16100596.1| Sel1 repeat protein [Acinetobacter baumannii Naval-83]
gi|421701063|ref|ZP_16140572.1| Sel1 repeat protein [Acinetobacter baumannii IS-58]
gi|421798561|ref|ZP_16234581.1| Sel1 repeat protein [Acinetobacter baumannii Naval-21]
gi|421799900|ref|ZP_16235890.1| Sel1 repeat protein [Acinetobacter baumannii Canada BC1]
gi|169149400|emb|CAM87284.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|213055574|gb|ACJ40476.1| Sel1 repeat family [Acinetobacter baumannii AB0057]
gi|213988940|gb|ACJ59239.1| Uncharacterized protein ybeQ [Acinetobacter baumannii AB307-0294]
gi|332727934|gb|EGJ59331.1| Sel1 repeat protein [Acinetobacter baumannii 6013150]
gi|332733554|gb|EGJ64719.1| Sel1 repeat protein [Acinetobacter baumannii 6013113]
gi|400210299|gb|EJO41269.1| Sel1 repeat protein [Acinetobacter baumannii Canada BC-5]
gi|404568437|gb|EKA73540.1| Sel1 repeat protein [Acinetobacter baumannii IS-58]
gi|408505879|gb|EKK07595.1| Sel1 repeat protein [Acinetobacter baumannii IS-235]
gi|408515604|gb|EKK17187.1| Sel1 repeat protein [Acinetobacter baumannii IS-251]
gi|408701569|gb|EKL46995.1| Sel1 repeat protein [Acinetobacter baumannii OIFC074]
gi|408705224|gb|EKL50572.1| Sel1 repeat protein [Acinetobacter baumannii Naval-83]
gi|410394003|gb|EKP46344.1| Sel1 repeat protein [Acinetobacter baumannii Naval-21]
gi|410409441|gb|EKP61374.1| Sel1 repeat protein [Acinetobacter baumannii Canada BC1]
Length = 302
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G G KN KA + F K AA+ + A G++Y E D K+A Y +
Sbjct: 121 GAYYANGDGGVKNYQKAFEWFSKAAAQDNAEAKYYLGILYEEGYGVTQDYKKA-FEWYSK 179
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKL-------LY-QASIAGHVRAQYQLALCLHRGRGVD 214
AA Q NL Y Q + V+L LY +A+ G+ +AQ L G GV+
Sbjct: 180 AAAQNYADAQNNLAALYAQGKGVELNNKKAFELYSKAAEQGNEKAQNNLGAIYALGIGVN 239
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ ++A WY +AA+ A + + Y GEG+ ++ A KW+++AA+ G+ A
Sbjct: 240 QDYKKAFEWYSKAAQQENDEAQFTVGMMYYKGEGVQQNNELAEKWLRKAAENGNKDA--- 296
Query: 275 HGLGLFTE 282
L LF E
Sbjct: 297 --LSLFEE 302
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 167 GDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD Q LG Y++ + V Y+ A+ G+ AQ L G+GV+ N +
Sbjct: 40 GDAGAQAKLGELYVEGQVVPQDYKKAFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNYK 99
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 278
+A WY +AAE G V+A N Y+ G+G ++++A +W +AA + +A+ G+
Sbjct: 100 KAFEWYSKAAEQGEVKAQNNLGAYYANGDGGVKNYQKAFEWFSKAAAQDNAEAKYYLGI- 158
Query: 279 LFTEG 283
L+ EG
Sbjct: 159 LYEEG 163
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCL 207
A Y +AA G+ Q NLG Y + V+ Y+ A+ G V+AQ L
Sbjct: 65 AFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNYKKAFEWYSKAAEQGEVKAQNNLGAYY 124
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G G N Q+A W+ +AA A Y + Y G G+ +++A +W +AA
Sbjct: 125 ANGDGGVKNYQKAFEWFSKAAAQDNAEAKYYLGILYEEGYGVTQDYKKAFEWYSKAAAQN 184
Query: 268 HGKAQLEHGLGLFTEGE--MMKAVVYLELATRAGETAADHVKNVI 310
+ AQ + L+ +G+ + EL ++A E + +N +
Sbjct: 185 YADAQ-NNLAALYAQGKGVELNNKKAFELYSKAAEQGNEKAQNNL 228
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
+G AQ +L G+ V + ++A WY +AA G A N Y+ G+G+ ++
Sbjct: 39 SGDAGAQAKLGELYVEGQVVPQDYKKAFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNY 98
Query: 254 RQARKWMKRAADCGHGKAQLEHGLGLF 280
++A +W +AA+ G KAQ + LG +
Sbjct: 99 KKAFEWYSKAAEQGEVKAQ--NNLGAY 123
>gi|294670609|ref|ZP_06735488.1| hypothetical protein NEIELOOT_02334 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307734|gb|EFE48977.1| hypothetical protein NEIELOOT_02334 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 142
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGV 213
QAA G+ A QFNLG+ Y + V+ Y +AS G +AQY L L + GRGV
Sbjct: 34 QAAEQGNAAAQFNLGVMYENGQGVRQDYVQAVQWYRKASEQGDAQAQYNLGLMYYDGRGV 93
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262
+ EA RWY +AAE G A + + Y+ G G+ +A KW +R
Sbjct: 94 RQDDAEAVRWYRQAAEQGDAEAQTHLAGMYAEGRGVRQDDAEAVKWYRR 142
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 190 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
QA+ G+ AQ+ L + G+GV + +A +WY +A+E G +A YN L Y G G+
Sbjct: 34 QAAEQGNAAAQFNLGVMYENGQGVRQDYVQAVQWYRKASEQGDAQAQYNLGLMYYDGRGV 93
Query: 250 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
+A +W ++AA+ G +AQ H G++ EG
Sbjct: 94 RQDDAEAVRWYRQAAEQGDAEAQT-HLAGMYAEG 126
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 33/145 (22%)
Query: 91 WNDALRPLRE---------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
W D + RE A G +++G+GVR++ +A+ + K + +G A
Sbjct: 22 WADDVSDFRETLQAAEQGNAAAQFNLGVMYENGQGVRQDYVQAVQWYRKASEQGDAQAQY 81
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQY 201
+ GLMY++ G+ EAV+ QA+ G AQ
Sbjct: 82 NLGLMYYD------------------------GRGVRQDDAEAVRWYRQAAEQGDAEAQT 117
Query: 202 QLALCLHRGRGVDFNLQEAARWYLR 226
LA GRGV + EA +WY R
Sbjct: 118 HLAGMYAEGRGVRQDDAEAVKWYRR 142
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 283
L+AAE G A +N + Y G+G+ + QA +W ++A++ G +AQ GL ++ +G
Sbjct: 33 LQAAEQGNAAAQFNLGVMYENGQGVRQDYVQAVQWYRKASEQGDAQAQYNLGL-MYYDG 90
>gi|114321729|ref|YP_743412.1| Sel1 domain-containing protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114228123|gb|ABI57922.1| Sel1 domain protein repeat-containing protein [Alkalilimnicola
ehrlichii MLHE-1]
Length = 359
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 155 AAISLYRQAAVLGDP--------AGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALC 206
AA+ YR+AA G P LG++ EA + A+ AG AQ QL C
Sbjct: 168 AAVRHYRRAAEQGHPQAAANLAGLLAMGLGVAQDPTEAARWWRLAAEAGDPDAQVQLGNC 227
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
GRGV + Q A WY RAA G+ N + + G G+ +A KW + AA+
Sbjct: 228 YRDGRGVAQDDQAAVDWYWRAARQGHPEGQTNVGVMHDQGRGVFKDPAKAVKWYRLAAEQ 287
Query: 267 GHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
G AQ + +++EG + ++A + LA R G A + + + SR R
Sbjct: 288 GFPPAQYNLAI-MYSEGHGVEEDKIEAWCWFSLADRQGYAPARDAVTWLDEVMDPISRAR 346
Query: 322 A 322
A
Sbjct: 347 A 347
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 20/188 (10%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISY-----LQEE---AVKLLYQASIAGHVRAQYQLALCL 207
A++L+R+AA G P + +LG+++ ++E+ AV+ +A+ GH +A LA L
Sbjct: 133 AVALWRRAAEAGLPDAENSLGVAHQMGRGVEEDFSAAVRHYRRAAEQGHPQAAANLAGLL 192
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV + EAARW+ AAE G A CY G G+ + A W RAA G
Sbjct: 193 AMGLGVAQDPTEAARWWRLAAEAGDPDAQVQLGNCYRDGRGVAQDDQAAVDWYWRAARQG 252
Query: 268 HGKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321
H + Q + G G+F + KAV + LA G A + ++ + D+
Sbjct: 253 HPEGQTNVGVMHDQGRGVFK--DPAKAVKWYRLAAEQGFPPAQYNLAIMYSEGHGVEEDK 310
Query: 322 AMLVVDSW 329
+++W
Sbjct: 311 ----IEAW 314
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG-LMYWEMD---KKEAAISLYRQAAVL 166
HG G+ ++L A + + A + A + G + + +D A +LYR+AA
Sbjct: 48 LAHGEGLEQDLAAARRWWEQAAEKDHADAWFNLGQITEYGLDGTPDPAQAAALYRRAADQ 107
Query: 167 GDPAGQFNL--------GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
G P G L G+ +AV L +A+ AG A+ L + GRGV+ +
Sbjct: 108 GHPQGLHALAALLFQGQGVPEDPAQAVALWRRAAEAGLPDAENSLGVAHQMGRGVEEDFS 167
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 276
A R Y RAAE G+ +A N + + G G+ +A +W + AA+ G AQ++ G
Sbjct: 168 AAVRHYRRAAEQGHPQAAANLAGLLAMGLGVAQDPTEAARWWRLAAEAGDPDAQVQLG 225
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 12/171 (7%)
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV--------KLLYQAS 192
DAG WE A L+R AA GDP Q LG+ E + + QA+
Sbjct: 10 ADAGRHAWERGDPAEAARLWRPAAEQGDPDAQVGLGLLLAHGEGLEQDLAAARRWWEQAA 69
Query: 193 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 252
H A + L G + +AA Y RAA+ G+ + ++ + G+G+P
Sbjct: 70 EKDHADAWFNLGQITEYGLDGTPDPAQAAALYRRAADQGHPQGLHALAALLFQGQGVPED 129
Query: 253 HRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATRAG 299
QA +RAA+ G A+ + H +G E + AV + A G
Sbjct: 130 PAQAVALWRRAAEAGLPDAENSLGVAHQMGRGVEEDFSAAVRHYRRAAEQG 180
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 32/162 (19%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G GV ++ +A + A G A V G Y + +AA+ Y +AA G P
Sbjct: 195 GLGVAQDPTEAARWWRLAAEAGDPDAQVQLGNCYRDGRGVAQDDQAAVDWYWRAARQGHP 254
Query: 170 AGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229
GQ N+G+ + Q GRGV + +A +WY AAE
Sbjct: 255 EGQTNVGVMHDQ----------------------------GRGVFKDPAKAVKWYRLAAE 286
Query: 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
G+ A YN ++ YS G G+ +A W A G+ A
Sbjct: 287 QGFPPAQYNLAIMYSEGHGVEEDKIEAWCWFSLADRQGYAPA 328
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ GRGV ++ A+D + + A +G + G+M+ + A+ YR A
Sbjct: 225 GNCYRDGRGVAQDDQAAVDWYWRAARQGHPEGQTNVGVMHDQGRGVFKDPAKAVKWYRLA 284
Query: 164 AVLGDPAGQFNLGISYLQEEAVK 186
A G P Q+NL I Y + V+
Sbjct: 285 AEQGFPPAQYNLAIMYSEGHGVE 307
>gi|409913039|ref|YP_006891504.1| TPR domain-containing protein, SEL1 repeat subfamily [Geobacter
sulfurreducens KN400]
gi|298506625|gb|ADI85348.1| TPR domain protein, SEL1 repeat subfamily [Geobacter sulfurreducens
KN400]
Length = 231
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 157 ISLYRQAAVLGDPAGQFNLGISY------LQE--EAVKLLYQASIAGHVRAQYQLALCLH 208
I +QAA GDPA QF +G++Y +Q+ EA K A+ GH AQ L
Sbjct: 31 IEKVKQAATQGDPASQFQMGVAYDSGRGVIQDIKEAAKWYRAAAEQGHAEAQNSLGSLYQ 90
Query: 209 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 268
G GV + A WY +AA G A + + Y G G+P S + A + ++AA+ G
Sbjct: 91 AGEGVSQDYLMAKVWYEKAANQGNAMAKNSLAYLYDLGLGIPASPKVAAQLYEQAAEQGE 150
Query: 269 GKAQLEHGLGLFTEG------EMMKAVVYLELA 295
A + G+ L T+G + ++A +LELA
Sbjct: 151 LTAMMNLGI-LLTQGKPEVEKDYIEAYKWLELA 182
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 185 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 244
++ + QA+ G +Q+Q+ + GRGV +++EAA+WY AAE G+ A + Y
Sbjct: 31 IEKVKQAATQGDPASQFQMGVAYDSGRGVIQDIKEAAKWYRAAAEQGHAEAQNSLGSLYQ 90
Query: 245 FGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGE 300
GEG+ + A+ W ++AA+ G+ A+ + LGL A E A GE
Sbjct: 91 AGEGVSQDYLMAKVWYEKAANQGNAMAKNSLAYLYDLGLGIPASPKVAAQLYEQAAEQGE 150
Query: 301 TAADHVKNVILQQ 313
A ++L Q
Sbjct: 151 LTAMMNLGILLTQ 163
>gi|420160045|ref|ZP_14666835.1| Sel1 repeat protein [Capnocytophaga ochracea str. Holt 25]
gi|394761185|gb|EJF43611.1| Sel1 repeat protein [Capnocytophaga ochracea str. Holt 25]
Length = 256
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A++ Y +AA GD Q LG+ Y E+A +A+ G+ AQ +L +C
Sbjct: 52 AVAWYEKAAKQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCY 111
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
H+G+GV + ++A W+ +AA+ + A CY G G+ S A W ++AA+ G
Sbjct: 112 HKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQG 171
Query: 268 HGKAQLEHGLGLFT-EG---EMMKAVVYLELATRAGETAADHV 306
+AQ G F +G KA+ + E A G+ A +
Sbjct: 172 DVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTI 214
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 173 FNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 232
F G+SY Q E K L + + G + AQ +LA +G GV + +A WY +AA+ G
Sbjct: 5 FFFGMSYSQREDFKTLIEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAKQGD 64
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 287
V++ LCY + +G+ S+ +A W ++AA+ G+ +AQ + G+ + +G+ +K
Sbjct: 65 VKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV-CYHKGQGVK 118
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 164 AVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 215
A GD Q L +Y + +AV +A+ G V++Q +L LC + +GV
Sbjct: 24 ATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAKQGDVKSQTKLGLCYYYRKGVVQ 83
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 275
+ ++AA W+ +AAE GY A +CY G+G+ S QA W ++AAD +AQ
Sbjct: 84 SYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFL 143
Query: 276 GL----GLFTEGEMMKAVVYLELATRAGETAA 303
G GL AV++ E A G+ A
Sbjct: 144 GYCYYKGLGVAQSDSDAVLWYEKAANQGDVEA 175
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 77/207 (37%), Gaps = 48/207 (23%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
+R ++ G GV ++ KA+ + K A +G + GL Y+ + E A +
Sbjct: 33 VRLATNYEKGIGVPQSFPKAVAWYEKAAKQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWF 92
Query: 161 RQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212
++AA G Q LG+ Y + E+AV +A+ AQ L C ++G G
Sbjct: 93 QKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLG 152
Query: 213 VDFNLQEAARWYLRAAEGGYVRAMYNTS-------------------------------- 240
V + +A WY +AA G V A N
Sbjct: 153 VAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQ 212
Query: 241 ----LCYSFGEGLPLSHRQARKWMKRA 263
CY G G+ S ++A W ++
Sbjct: 213 TILGFCYYAGTGVDKSQKRAIYWFEKG 239
>gi|301101950|ref|XP_002900063.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102638|gb|EEY60690.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 319
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 108 GKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQ 162
GK F G V ++L++AL + + A G A D G MY + + A+ LYRQ
Sbjct: 128 GKLFFQGNDEVPRDLERALHYWTQAAKSGHMAANYDLGYMYAQGLHVTQDDDKAVQLYRQ 187
Query: 163 AAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
AA P LG + L E+AV A+ AG+ AQ+ L C GRG++
Sbjct: 188 AAKQNMPEAHRALGNACLHGRGVVKSAEQAVTHFRHAAEAGNALAQFDLGACYMLGRGIE 247
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
+ +AA+ + AAEGG +A + + G +P + +A ++ + AA G
Sbjct: 248 QDHSKAAQLFFLAAEGGVPQAQLCLAQLFETGHEIPADYDKAVQYYQLAAKGG 300
>gi|282600129|ref|ZP_05973126.2| Sel1 protein [Providencia rustigianii DSM 4541]
gi|282566530|gb|EFB72065.1| Sel1 protein [Providencia rustigianii DSM 4541]
Length = 239
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 162 QAAVLGDPAGQFNLGISYLQEEAVK--------LLYQASIAGHVRAQYQLALCLHRGRGV 213
+AA G+ LG Y + + VK L+ QA++ G+ RAQ L + G+GV
Sbjct: 39 KAAEQGNEDALIMLGTLYYEGKGVKQDFKKTAQLISQAALKGNARAQTILGAMYYEGKGV 98
Query: 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 273
+ EAA+WY AAE GY A + Y G+G+PL ++ A KW AA+ G +Q
Sbjct: 99 GQDYSEAAKWYKLAAEQGYSMAQGQLATLYYMGKGVPLDYQIASKWFMEAAEQGDSYSQA 158
Query: 274 EHGLGLFTEGE 284
G ++ EG+
Sbjct: 159 LLG-AMYYEGK 168
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 127 SFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ 181
+ K A +G+ A++ G +Y+E D K+ A L QAA+ G+ Q LG Y +
Sbjct: 36 ALCKAAEQGNEDALIMLGTLYYEGKGVKQDFKKTA-QLISQAALKGNARAQTILGAMYYE 94
Query: 182 --------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG-- 231
EA K A+ G+ AQ QLA + G+GV + Q A++W++ AAE G
Sbjct: 95 GKGVGQDYSEAAKWYKLAAEQGYSMAQGQLATLYYMGKGVPLDYQIASKWFMEAAEQGDS 154
Query: 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 284
Y +A+ Y G+G+ + A KW+K+A++ + KA G LF G+
Sbjct: 155 YSQALLGA--MYYEGKGVDKDSKIAAKWLKKASEQNNPKAHFILGF-LFLTGD 204
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 16/182 (8%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKK 153
+A+++L G + G+GV+++ K + A +G+ A G MY+E D
Sbjct: 46 EDALIML--GTLYYEGKGVKQDFKKTAQLISQAALKGNARAQTILGAMYYEGKGVGQDYS 103
Query: 154 EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLAL 205
EAA Y+ AA G Q L Y + V L YQ A+ G +Q L
Sbjct: 104 EAA-KWYKLAAEQGYSMAQGQLATLYYMGKGVPLDYQIASKWFMEAAEQGDSYSQALLGA 162
Query: 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265
+ G+GVD + + AA+W +A+E +A + + G+G+ + A K+ ++A D
Sbjct: 163 MYYEGKGVDKDSKIAAKWLKKASEQNNPKAHFILGFLFLTGDGVRKNEALASKYFRKACD 222
Query: 266 CG 267
G
Sbjct: 223 SG 224
>gi|416287190|ref|ZP_11648794.1| hypothetical protein YbeQ [Shigella boydii ATCC 9905]
gi|320178434|gb|EFW53402.1| hypothetical protein YbeQ [Shigella boydii ATCC 9905]
Length = 325
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAIVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 GQFNL------GISYLQEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
Q NL G Q E + + +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGHMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E AI Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAIVWYQI 125
Query: 163 AAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVD 214
AA G Q NLG Y V Y QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV K+ A + + A +G + A + +Y + + A Y ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKS 198
Query: 164 AVLGDPAGQFNLGISYLQEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDF 215
A G+ QF + Y E V Y+ A+ G V A + G+GV+
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGHMYKHGQGVEK 258
Query: 216 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256
+ Q A W+ +AAE A YN ++ Y +GEG P+ RQA
Sbjct: 259 DYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQA 299
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 174 NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGY 232
NL I + E A K G AQY + +R +D E A ++L+ AAE G+
Sbjct: 10 NLSIDEIIERAEK--------GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGH 61
Query: 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKA 288
A Y+ Y+ + + A W+K+AA GH A + LG + GE +A
Sbjct: 62 CEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEA 119
Query: 289 VVYLELATRAGETAADHVKNVILQQLSATSRDRAM 323
+V+ ++A +G + A + + + + ++D A+
Sbjct: 120 IVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYAL 154
>gi|270159197|ref|ZP_06187853.1| enhanced entry protein EnhC [Legionella longbeachae D-4968]
gi|289165975|ref|YP_003456113.1| enhanced entry protein EnhC [Legionella longbeachae NSW150]
gi|269987536|gb|EEZ93791.1| enhanced entry protein EnhC [Legionella longbeachae D-4968]
gi|288859148|emb|CBJ13077.1| enhanced entry protein EnhC [Legionella longbeachae NSW150]
Length = 1201
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Query: 139 AMVDAGLMYWEMDKK-EAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQ------- 190
A+V G M+ +D A+ Y +AAV GD G ++LG+ YL + + + YQ
Sbjct: 901 ALVALGFMHETIDDNYPKALKEYEKAAVKGDALGTYDLGLMYLYGKGIPVDYQKARDFFA 960
Query: 191 -ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 249
A+ G A QL G G + Q+A WY +AAE G A+Y L G
Sbjct: 961 EAANQGVHEAMNQLGTIYFYGLGQARDTQQALAWYKKAAEAGNANALYQLGLLSETGVIT 1020
Query: 250 PLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATR 297
L A K+ +++AD G+ KA L +GLG+ + + M A Y +LA R
Sbjct: 1021 KLDFNDALKYYQQSADKGNEKAMLALARMYHYGLGVEKDPK-MAASFYQKLALR 1073
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 27/258 (10%)
Query: 85 SLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG 144
+L + + A L EA+V L F H + N KAL + K A +G L D G
Sbjct: 885 NLAQEWYQKAATALPEALVALG----FMH-ETIDDNYPKALKEYEKAAVKGDALGTYDLG 939
Query: 145 LMYW-----EMDKKEAAISLYRQAAVLGDPAGQFNLGISYL--------QEEAVKLLYQA 191
LMY +D ++A + +AA G LG Y ++A+ +A
Sbjct: 940 LMYLYGKGIPVDYQKAR-DFFAEAANQGVHEAMNQLGTIYFYGLGQARDTQQALAWYKKA 998
Query: 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 251
+ AG+ A YQL L G + +A ++Y ++A+ G +AM + Y +G G+
Sbjct: 999 AEAGNANALYQLGLLSETGVITKLDFNDALKYYQQSADKGNEKAMLALARMYHYGLGVEK 1058
Query: 252 SHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVK 307
+ A + ++ A + AQ + G G E + K L+ A+ G A V
Sbjct: 1059 DPKMAASFYQKLALRQNAYAQYQLGTYYLEGTAGERSVSKGKELLQQASDNGNLQARQV- 1117
Query: 308 NVILQQLSATSRDRAMLV 325
LQ+L A ++ R +
Sbjct: 1118 ---LQRLEAQTQARVSFI 1132
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQ +LA L +G G + +L EA RWY +AE G A Y + Y G +
Sbjct: 826 GDQYAQLKLAYMLQKGLGSEPDLTEAQRWYTASAEQGNPLAQYLLAQLYQLGINGEPDYN 885
Query: 255 QARKWMKRAA 264
A++W ++AA
Sbjct: 886 LAQEWYQKAA 895
>gi|445412297|ref|ZP_21433166.1| Sel1 repeat protein [Acinetobacter sp. WC-743]
gi|444767359|gb|ELW91608.1| Sel1 repeat protein [Acinetobacter sp. WC-743]
Length = 282
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISY-----LQE---EAVKLLYQASIAGHVRAQYQLALCL 207
A L+ AA LGD LG Y +QE +A + +A+ AG+ A+ +
Sbjct: 115 AKKLFEDAAALGDVPSLNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENNIGNMY 174
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV + +A++WY++AAE G V A YN L Y G+G+ + QA +W +AA+ G
Sbjct: 175 LHGHGVSQDKLKASQWYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYQWFLKAANQG 234
Query: 268 HGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 303
AQ G GL ++ A + E + +AG + A
Sbjct: 235 ESGAQYHLGKIYKDGLGVNKDLSLAKNWFEKSAQAGNSLA 274
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDK 152
L + L G +K G GV++N +A + +LK A G + A + G MY DK
Sbjct: 125 LGDVPSLNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENNIGNMYLHGHGVSQDK 184
Query: 153 KEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLY--------QASIAGHVRAQYQLA 204
+A+ Y +AA G+ Q+NLG+ Y + +K Y +A+ G AQY L
Sbjct: 185 LKAS-QWYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYQWFLKAANQGESGAQYHLG 243
Query: 205 LCLHRGRGVDFNLQEAARWYLRAAEGG 231
G GV+ +L A W+ ++A+ G
Sbjct: 244 KIYKDGLGVNKDLSLAKNWFEKSAQAG 270
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 235
GI +A KL A+ G V + +L G GV N +A+ +YL+AA GY A
Sbjct: 107 GIKNDYAQAKKLFEDAAALGDVPSLNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAA 166
Query: 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF----TEGEMMKAVVY 291
N Y G G+ +A +W +AA+ G AQ GL F + + +A +
Sbjct: 167 ENNIGNMYLHGHGVSQDKLKASQWYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYQW 226
Query: 292 LELATRAGETAADH 305
A GE+ A +
Sbjct: 227 FLKAANQGESGAQY 240
>gi|198452106|ref|XP_001358633.2| GA10167 [Drosophila pseudoobscura pseudoobscura]
gi|198131789|gb|EAL27774.2| GA10167 [Drosophila pseudoobscura pseudoobscura]
Length = 811
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ + ++ KAL+ F A G+ + G +Y E ++ E A + +A+
Sbjct: 334 YQGGKAIEQDHQKALEYFTLAANAGNAIGFAFLGKLYLEGSEQIKADNETAFKYFSKASE 393
Query: 166 LGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GDP G LG+ YL+ +A+ QA+ G V Q QL G GV +
Sbjct: 394 TGDPVGLSGLGVMYLKGLGVPKDPVKALSYFTQAADQGWVDGQVQLGTMYFTGNGVKTDY 453
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
A +++ A + G+V A YN + +++G G+ S A ++ K ++ G +L H
Sbjct: 454 GLALKYFNLATQSGHVLAYYNLGVMHAYGMGVLRSCPTAVEFFKSVSERGRWSNRLMHAY 513
Query: 278 GLFTEGEMMKAVVYLELATRAGETAA 303
+ + + +A + L G A
Sbjct: 514 SDYKQNRIDEAYMQYSLMGEVGYEVA 539
>gi|304313221|ref|YP_003812819.1| hypothetical protein HDN1F_36090 [gamma proteobacterium HdN1]
gi|301798954|emb|CBL47192.1| Hypothetical protein HDN1F_36090 [gamma proteobacterium HdN1]
Length = 199
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAV-----KLLY---QASI 193
+AGL ++ AAI + A GD A Q+NLG+ Y V K Y +A+
Sbjct: 43 NAGLAAYDKGDFAAAIEQWAPLAEKGDTAAQYNLGVIYKNARGVPRDNRKAFYYFRKAAE 102
Query: 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 253
G +A +A+ G GV N QEA W +AA+ G + A +N L G G P +
Sbjct: 103 RGDTKAILNVAVAYAEGAGVGQNYQEAFIWMRKAADAGILLAQFNMGLMLYNGWGTPRNK 162
Query: 254 RQARKWMKRAADCG 267
A+ WMK AAD G
Sbjct: 163 EAAQAWMKMAADAG 176
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 254
G AQY L + RGV + ++A ++ +AAE G +A+ N ++ Y+ G G+ +++
Sbjct: 68 GDTAAQYNLGVIYKNARGVPRDNRKAFYYFRKAAERGDTKAILNVAVAYAEGAGVGQNYQ 127
Query: 255 QARKWMKRAADCGHGKAQLEHGLGLFT 281
+A WM++AAD G AQ GL L+
Sbjct: 128 EAFIWMRKAADAGILLAQFNMGLMLYN 154
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 24/124 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+ RGV ++ KA F K A RG T A+++ + Y E
Sbjct: 77 GVIYKNARGVPRDNRKAFYYFRKAAERGDTKAILNVAVAYAE------------------ 118
Query: 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 227
G+ +EA + +A+ AG + AQ+ + L L+ G G N + A W A
Sbjct: 119 ------GAGVGQNYQEAFIWMRKAADAGILLAQFNMGLMLYNGWGTPRNKEAAQAWMKMA 172
Query: 228 AEGG 231
A+ G
Sbjct: 173 ADAG 176
>gi|340373381|ref|XP_003385220.1| PREDICTED: uncharacterized protein ybeQ-like [Amphimedon
queenslandica]
Length = 323
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQ 162
+ + + G+G + A F A + A G+MY+ A +LY+
Sbjct: 93 YAQLLRIGQGCTADPVTAAKIFTDLALKAHPYAQFSLGVMYYSGLGIEQSHSKAFTLYKV 152
Query: 163 AAVLGDPAGQFNLGISYL--------QEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214
+A G P LG Y +EEAVK A+ G A LA C ++G GV+
Sbjct: 153 SAKNGIPQAYSALGDMYFNGQGIPEDKEEAVKCYENAAKLGDPAAHLSLAQCYNKGSGVE 212
Query: 215 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274
+ Q++ Y AA+ V +YN ++ Y G+G+ S +A ++ ++AAD G AQ+
Sbjct: 213 VSFQKSFEHYKAAADAELVLGIYNVAVHYFAGKGVEHSFEKAVEYFQKAADRGFTAAQVN 272
Query: 275 HG----LGLFTEGEMMKAVVYLELATRAGETA 302
G GL E + KA LA + A
Sbjct: 273 LGNMYYQGLGVEKNVAKAKELYSLAAEDDKNA 304
>gi|440801303|gb|ELR22323.1| Sel1 repeatcontaining protein [Acanthamoeba castellanii str. Neff]
Length = 508
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 150 MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQY 201
+D AA+ LY + A +G P NLG+ Y + +AV+ QA+ + R Y
Sbjct: 177 LDYTRAAV-LYARFAKMGHPVALSNLGVCYHKGRGVKKSLSKAVRYYTQAAQHNYARGNY 235
Query: 202 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL-SHRQARKWM 260
LA+C G GV + +A Y ++A GY A Y +CYS +G+ +QA
Sbjct: 236 NLAVCYDLGDGVVRDAAKAVDHYSKSARLGYAVAQYYMGVCYSHAKGIESRDFKQAIDMW 295
Query: 261 KRAADCGHGKAQL----EHGLGLFTEGEMMKAVVYLELATRAG-----ETAADHVKNVIL 311
++AA GHG AQL H GL EG + K V+ L RA E A D +K+++
Sbjct: 296 RKAARQGHGLAQLVLANYHREGL--EGLLPKDVLKAALLFRAAIGWGDEKAWDRLKDLLA 353
Query: 312 QQLSATSRDRAMLVVDSWRAMPSLH 336
+ + + D A P H
Sbjct: 354 ASPTGDFEECGLDRCDGCEARPVEH 378
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 155 AAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVRAQYQLALC 206
A+ L ++AA +G +++L + + + L Y + GH A L +C
Sbjct: 145 CAVHLLQRAAAMGHVGAKWDLHCCRGRGDDITLDYTRAAVLYARFAKMGHPVALSNLGVC 204
Query: 207 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266
H+GRGV +L +A R+Y +AA+ Y R YN ++CY G+G+ +A ++A
Sbjct: 205 YHKGRGVKKSLSKAVRYYTQAAQHNYARGNYNLAVCYDLGDGVVRDAAKAVDHYSKSARL 264
Query: 267 GHGKAQLEHGL 277
G+ AQ G+
Sbjct: 265 GYAVAQYYMGV 275
>gi|195145426|ref|XP_002013694.1| GL24274 [Drosophila persimilis]
gi|194102637|gb|EDW24680.1| GL24274 [Drosophila persimilis]
Length = 806
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ + ++ KAL+ F A G+ + G +Y E ++ E A + +A+
Sbjct: 334 YQGGKAIEQDHQKALEYFTLAANAGNAIGFAFLGKLYLEGSEQIKADNETAFKYFSKASE 393
Query: 166 LGDPAGQFNLGISYLQE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217
GDP G LG+ YL+ +A+ QA+ G V Q QL G GV +
Sbjct: 394 TGDPVGLSGLGVMYLKGLGVPKDPVKALSYFTQAADQGWVDGQVQLGTMYFTGNGVKTDY 453
Query: 218 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
A +++ A + G+V A YN + +++G G+ S A ++ K ++ G +L H
Sbjct: 454 GLALKYFNLATQSGHVLAYYNLGVMHAYGMGVLRSCPTAVEFFKSVSERGRWSNRLMHAY 513
Query: 278 GLFTEGEMMKAVVYLELATRAGETAA 303
+ + + +A + L G A
Sbjct: 514 SDYKQNRIDEAYMQYSLMGEVGYEVA 539
>gi|451982335|ref|ZP_21930653.1| putative Beta-lactamase [Nitrospina gracilis 3/211]
gi|451760500|emb|CCQ91937.1| putative Beta-lactamase [Nitrospina gracilis 3/211]
Length = 194
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%)
Query: 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 241
+EA +A+ AGHV AQ QL + G+GV + A W +AAE G+VRA N +
Sbjct: 50 KEAFAWYRKAAEAGHVEAQTQLGMMYATGQGVRQDYDAALAWTRKAAESGHVRAQTNLGI 109
Query: 242 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 277
Y G G+P +++ KW+ A+ G KAQ + GL
Sbjct: 110 LYMTGFGIPRDFKESVKWLTMGAEGGDPKAQTQLGL 145
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA--------GHVR 198
Y + D KEA + YR+AA G Q LG+ Y + V+ Y A++A GHVR
Sbjct: 44 YEQSDYKEA-FAWYRKAAEAGHVEAQTQLGMMYATGQGVRQDYDAALAWTRKAAESGHVR 102
Query: 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 258
AQ L + G G+ + +E+ +W AEGG +A L G G+ +A
Sbjct: 103 AQTNLGILYMTGFGIPRDFKESVKWLTMGAEGGDPKAQTQLGLMRETGIGIARDPIRALH 162
Query: 259 WMKRAA 264
W ++AA
Sbjct: 163 WYRKAA 168
>gi|410694991|ref|YP_003625613.1| putative Beta-lactamase [Thiomonas sp. 3As]
gi|294341416|emb|CAZ89833.1| putative Beta-lactamase [Thiomonas sp. 3As]
Length = 302
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAAISL-YRQAAVL 166
+ HGRGV ++ +ALD + + G AM G +Y + + +A + Y++AA
Sbjct: 81 YIHGRGVEQSDAQALDLWRQACEAGLARAMNGLGFLYEHGRGVPRSDAQAQVWYQRAAEA 140
Query: 167 GDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 218
GD AGQ NLGI L A + A+ GH A Y+ G+GV+ +
Sbjct: 141 GDAAGQCNLGIFLLNGRCGPADPSGAAAMFSLAAHQGHREACYRYGHLFVTGQGVEQDDA 200
Query: 219 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 277
+A W +AAE A + + G G L + QA W +RAA+ G +AQ G+
Sbjct: 201 QAVAWLRKAAEMDMPEAQRELAALLAMGRGGSLDYTQAAGWYQRAAELGDAQAQFGLGVL 260
Query: 278 ---GLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 311
GL ++ KA + LA GE A KN+ L
Sbjct: 261 YYRGLGKLPDVEKARHWWTLAAAQGEERAR--KNLAL 295
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 167 GDPAGQFNLGISYLQEE----AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 222
GD A Q LG Y + A +A+ G A+Y L GRGV+ + +A
Sbjct: 37 GDAAAQEWLGAHYHDRKDFVHAAHWYRKAAEQGSAGARYNLGWLYIHGRGVEQSDAQALD 96
Query: 223 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 280
+ +A E G RAM Y G G+P S QA+ W +RAA+ G Q LG+F
Sbjct: 97 LWRQACEAGLARAMNGLGFLYEHGRGVPRSDAQAQVWYQRAAEAGDAAGQCN--LGIF 152
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 58/140 (41%), Gaps = 9/140 (6%)
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A YR+AA G ++NLG Y+ +A+ L QA AG RA L
Sbjct: 58 AAHWYRKAAEQGSAGARYNLGWLYIHGRGVEQSDAQALDLWRQACEAGLARAMNGLGFLY 117
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
GRGV + +A WY RAAE G N + G P A AA G
Sbjct: 118 EHGRGVPRSDAQAQVWYQRAAEAGDAAGQCNLGIFLLNGRCGPADPSGAAAMFSLAAHQG 177
Query: 268 HGKAQLEHGLGLFTEGEMMK 287
H +A +G LF G+ ++
Sbjct: 178 HREACYRYGH-LFVTGQGVE 196
>gi|239501328|ref|ZP_04660638.1| hypothetical protein AbauAB_03346 [Acinetobacter baumannii AB900]
gi|421677145|ref|ZP_16117038.1| Sel1 repeat protein [Acinetobacter baumannii OIFC111]
gi|410393423|gb|EKP45776.1| Sel1 repeat protein [Acinetobacter baumannii OIFC111]
Length = 259
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA L G R+ G+ V K+ KA F A +G +A D MY++ +E
Sbjct: 35 EASQLYEQGGRYFLGKDVTKDYQKAFSYFQMAAEKGLPIAQNDLAGMYFKGIGTQKNEEK 94
Query: 156 AISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCL 207
A Y +AA P Q+NLG+ Y +A++ +S G+ +AQY LA
Sbjct: 95 AYYWYEKAAKNNFPEAQYNLGLMYDNGYYVNKDRSKALEFYKLSSDQGYAKAQYNLANAY 154
Query: 208 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267
G GV ++ A Y +AA+ + A YN + YS G + + +A + + A+ G
Sbjct: 155 LSGNGVKKDINLALELYKKAADQNFSEAQYNLANIYSDGSLVKQDNEKALELYIKVAEKG 214
Query: 268 HGKAQ 272
+AQ
Sbjct: 215 VPEAQ 219
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 162 QAAVLGDPAGQFNLG--ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219
+A+ L + G++ LG ++ ++A A+ G AQ LA +G G N ++
Sbjct: 35 EASQLYEQGGRYFLGKDVTKDYQKAFSYFQMAAEKGLPIAQNDLAGMYFKGIGTQKNEEK 94
Query: 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 279
A WY +AA+ + A YN L Y G + +A ++ K ++D G+ KAQ
Sbjct: 95 AYYWYEKAAKNNFPEAQYNLGLMYDNGYYVNKDRSKALEFYKLSSDQGYAKAQYNLANAY 154
Query: 280 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAM 332
+ + K + LA + AAD + L+ D +++ D+ +A+
Sbjct: 155 LSGNGVKKDI---NLALELYKKAADQNFSEAQYNLANIYSDGSLVKQDNEKAL 204
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,941,363,903
Number of Sequences: 23463169
Number of extensions: 191911521
Number of successful extensions: 489689
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5043
Number of HSP's successfully gapped in prelim test: 2077
Number of HSP's that attempted gapping in prelim test: 439329
Number of HSP's gapped (non-prelim): 29380
length of query: 336
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 193
effective length of database: 9,003,962,200
effective search space: 1737764704600
effective search space used: 1737764704600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)