Query 019734
Match_columns 336
No_of_seqs 260 out of 2521
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 06:19:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019734.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019734hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e4b_A ALGK; tetratricopeptide 100.0 9.4E-34 3.2E-38 267.1 24.9 253 77-333 153-422 (452)
2 2xm6_A Protein corresponding t 100.0 3.8E-31 1.3E-35 251.5 35.1 248 78-329 56-322 (490)
3 1ouv_A Conserved hypothetical 100.0 3.1E-31 1.1E-35 232.6 30.6 246 65-314 6-267 (273)
4 2xm6_A Protein corresponding t 100.0 7.7E-31 2.6E-35 249.5 35.2 250 78-331 92-359 (490)
5 3rjv_A Putative SEL1 repeat pr 100.0 1.9E-30 6.4E-35 219.9 22.2 190 122-311 3-210 (212)
6 1ouv_A Conserved hypothetical 100.0 7.5E-29 2.6E-33 217.3 31.4 233 98-334 3-253 (273)
7 3rjv_A Putative SEL1 repeat pr 100.0 8.9E-29 3E-33 209.6 22.4 185 89-278 6-209 (212)
8 3e4b_A ALGK; tetratricopeptide 100.0 1.8E-27 6E-32 224.2 26.5 223 71-297 182-420 (452)
9 1klx_A Cysteine rich protein B 99.9 2.1E-23 7E-28 164.4 15.1 136 112-277 2-137 (138)
10 1w3b_A UDP-N-acetylglucosamine 99.9 1.3E-21 4.4E-26 179.6 28.9 255 67-335 69-371 (388)
11 1w3b_A UDP-N-acetylglucosamine 99.9 1.6E-21 5.6E-26 178.9 29.1 230 70-313 140-385 (388)
12 3hym_B Cell division cycle pro 99.9 1.6E-21 5.6E-26 173.8 26.4 257 66-336 23-303 (330)
13 3ieg_A DNAJ homolog subfamily 99.9 1.4E-19 4.8E-24 162.8 28.7 254 69-336 7-339 (359)
14 2pl2_A Hypothetical conserved 99.9 4.2E-20 1.4E-24 156.5 22.6 186 100-297 4-213 (217)
15 4eqf_A PEX5-related protein; a 99.9 1.4E-20 4.7E-25 171.2 20.9 219 67-299 67-311 (365)
16 3hym_B Cell division cycle pro 99.9 9.4E-20 3.2E-24 162.3 23.8 229 70-312 61-315 (330)
17 2y4t_A DNAJ homolog subfamily 99.9 4.2E-19 1.4E-23 165.5 28.3 185 67-265 28-239 (450)
18 1fch_A Peroxisomal targeting s 99.9 1.2E-19 4.1E-24 164.6 23.5 236 67-316 66-345 (368)
19 2y4t_A DNAJ homolog subfamily 99.9 4.6E-19 1.6E-23 165.2 27.9 256 65-336 60-362 (450)
20 3cv0_A Peroxisome targeting si 99.8 1.3E-19 4.4E-24 161.2 22.0 248 67-330 23-313 (327)
21 3u4t_A TPR repeat-containing p 99.8 6.3E-20 2.2E-24 159.5 18.8 234 67-312 5-266 (272)
22 2h6f_A Protein farnesyltransfe 99.8 1.9E-19 6.4E-24 165.5 22.4 224 100-335 96-351 (382)
23 2xpi_A Anaphase-promoting comp 99.8 8.2E-19 2.8E-23 169.6 27.9 258 65-336 305-583 (597)
24 1klx_A Cysteine rich protein B 99.8 8.5E-20 2.9E-24 143.6 15.8 122 182-309 12-137 (138)
25 2h6f_A Protein farnesyltransfe 99.8 3.5E-19 1.2E-23 163.6 22.0 228 69-308 101-358 (382)
26 4eqf_A PEX5-related protein; a 99.8 2E-19 6.9E-24 163.4 19.4 221 100-334 64-312 (365)
27 2gw1_A Mitochondrial precursor 99.8 1.2E-18 4E-23 164.9 24.8 252 67-334 8-369 (514)
28 2pl2_A Hypothetical conserved 99.8 9.2E-19 3.2E-23 148.2 20.8 187 135-329 3-211 (217)
29 1fch_A Peroxisomal targeting s 99.8 2.2E-19 7.5E-24 162.9 18.1 245 77-334 37-316 (368)
30 3uq3_A Heat shock protein STI1 99.8 1.6E-17 5.5E-22 142.5 27.9 215 67-299 7-237 (258)
31 3fp2_A TPR repeat-containing p 99.8 2.3E-18 7.9E-23 164.0 23.9 250 66-332 26-407 (537)
32 3u4t_A TPR repeat-containing p 99.8 1.1E-18 3.6E-23 151.7 19.0 222 100-336 2-254 (272)
33 2gw1_A Mitochondrial precursor 99.8 2E-18 6.8E-23 163.3 21.3 257 65-335 186-481 (514)
34 3vtx_A MAMA; tetratricopeptide 99.8 2.7E-18 9.1E-23 140.8 19.3 170 100-307 4-179 (184)
35 3vtx_A MAMA; tetratricopeptide 99.8 2.9E-18 9.9E-23 140.6 19.4 164 65-238 5-178 (184)
36 3mkr_A Coatomer subunit epsilo 99.8 1.2E-18 4.2E-23 154.3 16.9 248 72-336 6-268 (291)
37 3ieg_A DNAJ homolog subfamily 99.8 4.4E-17 1.5E-21 146.4 27.4 234 66-313 72-352 (359)
38 3uq3_A Heat shock protein STI1 99.8 1.2E-17 4E-22 143.4 22.0 216 100-333 4-237 (258)
39 4a1s_A PINS, partner of inscut 99.8 1.8E-17 6E-22 152.8 23.6 255 67-333 50-373 (411)
40 2xpi_A Anaphase-promoting comp 99.8 5.4E-17 1.9E-21 156.7 27.9 224 73-310 347-593 (597)
41 3fp2_A TPR repeat-containing p 99.8 1.6E-17 5.5E-22 158.1 23.7 242 79-334 216-493 (537)
42 4abn_A Tetratricopeptide repea 99.8 1.9E-17 6.4E-22 156.7 20.2 181 100-292 101-315 (474)
43 2ho1_A Type 4 fimbrial biogene 99.8 1.1E-16 3.7E-21 137.5 23.1 189 101-301 37-241 (252)
44 2q7f_A YRRB protein; TPR, prot 99.8 2.6E-17 9E-22 140.1 19.0 191 69-299 27-223 (243)
45 4g1t_A Interferon-induced prot 99.8 9.4E-18 3.2E-22 157.6 17.7 216 75-297 148-400 (472)
46 3cv0_A Peroxisome targeting si 99.8 7.2E-17 2.5E-21 143.4 22.1 222 100-335 20-272 (327)
47 3ro2_A PINS homolog, G-protein 99.8 2.3E-16 8E-21 139.9 25.2 257 67-335 7-335 (338)
48 3sf4_A G-protein-signaling mod 99.8 2.1E-16 7.3E-21 144.6 25.3 254 66-331 10-335 (406)
49 1xnf_A Lipoprotein NLPI; TPR, 99.8 1.1E-16 3.6E-21 139.0 21.2 212 76-301 16-247 (275)
50 2q7f_A YRRB protein; TPR, prot 99.8 9E-17 3.1E-21 136.8 20.1 169 65-243 57-237 (243)
51 4gyw_A UDP-N-acetylglucosamine 99.8 3.7E-17 1.3E-21 161.5 19.6 159 100-298 8-174 (723)
52 4gyw_A UDP-N-acetylglucosamine 99.7 3.7E-17 1.3E-21 161.4 19.2 156 65-230 9-174 (723)
53 4g1t_A Interferon-induced prot 99.7 1.4E-16 4.7E-21 149.6 22.1 256 71-335 57-404 (472)
54 4abn_A Tetratricopeptide repea 99.7 7.8E-17 2.7E-21 152.4 20.2 195 119-314 82-305 (474)
55 4i17_A Hypothetical protein; T 99.7 1E-15 3.5E-20 129.8 24.5 196 99-311 5-224 (228)
56 2ho1_A Type 4 fimbrial biogene 99.7 5.1E-16 1.8E-20 133.2 22.6 187 67-267 39-239 (252)
57 3ulq_A Response regulator aspa 99.7 2.7E-16 9.4E-21 144.1 20.7 219 71-298 109-368 (383)
58 2vq2_A PILW, putative fimbrial 99.7 8.1E-16 2.8E-20 129.0 21.6 189 99-299 6-212 (225)
59 2vq2_A PILW, putative fimbrial 99.7 3E-15 1E-19 125.5 23.9 182 69-264 12-209 (225)
60 3mkr_A Coatomer subunit epsilo 99.7 1.2E-15 4.2E-20 134.9 21.8 215 69-303 38-269 (291)
61 4a1s_A PINS, partner of inscut 99.7 5E-16 1.7E-20 143.0 19.7 223 68-302 89-376 (411)
62 3q15_A PSP28, response regulat 99.7 2.3E-15 7.8E-20 137.8 22.8 221 69-298 105-365 (378)
63 3ulq_A Response regulator aspa 99.7 2.4E-15 8.2E-20 137.8 22.4 216 103-331 105-367 (383)
64 3nf1_A KLC 1, kinesin light ch 99.7 1.8E-15 6.1E-20 133.3 18.3 227 65-299 27-308 (311)
65 1xnf_A Lipoprotein NLPI; TPR, 99.7 6.4E-15 2.2E-19 127.6 21.3 209 118-335 18-247 (275)
66 3sf4_A G-protein-signaling mod 99.7 3.3E-15 1.1E-19 136.6 20.0 220 100-331 8-295 (406)
67 2ond_A Cleavage stimulation fa 99.7 9.9E-14 3.4E-18 123.4 27.7 211 82-301 33-273 (308)
68 3urz_A Uncharacterized protein 99.7 3.6E-15 1.2E-19 125.2 16.2 153 67-229 6-185 (208)
69 2ond_A Cleavage stimulation fa 99.6 4.9E-14 1.7E-18 125.4 23.8 207 122-335 33-273 (308)
70 3ro2_A PINS homolog, G-protein 99.6 1.1E-14 3.6E-19 129.1 19.2 219 101-331 5-291 (338)
71 1qqe_A Vesicular transport pro 99.6 6.6E-15 2.3E-19 130.1 17.3 145 146-298 46-228 (292)
72 4i17_A Hypothetical protein; T 99.6 2.6E-14 9E-19 121.0 20.0 198 65-280 7-225 (228)
73 3edt_B KLC 2, kinesin light ch 99.6 3.2E-15 1.1E-19 129.5 14.6 191 100-298 42-281 (283)
74 1qqe_A Vesicular transport pro 99.6 4E-14 1.4E-18 125.1 21.5 185 108-304 44-275 (292)
75 3q15_A PSP28, response regulat 99.6 4.9E-14 1.7E-18 128.9 22.8 214 103-330 103-363 (378)
76 3urz_A Uncharacterized protein 99.6 9.5E-15 3.3E-19 122.5 16.2 165 100-300 3-188 (208)
77 3qky_A Outer membrane assembly 99.6 3.4E-14 1.2E-18 123.0 17.1 78 99-180 13-100 (261)
78 2pzi_A Probable serine/threoni 99.6 9.1E-15 3.1E-19 144.3 15.0 173 99-287 392-586 (681)
79 3nf1_A KLC 1, kinesin light ch 99.6 1.6E-13 5.5E-18 120.7 19.0 223 100-334 26-309 (311)
80 2pzi_A Probable serine/threoni 99.6 6.6E-14 2.3E-18 138.1 17.0 165 135-311 392-578 (681)
81 3as5_A MAMA; tetratricopeptide 99.6 3.8E-13 1.3E-17 108.8 18.5 161 100-298 7-173 (186)
82 2yhc_A BAMD, UPF0169 lipoprote 99.6 3.5E-13 1.2E-17 114.2 18.9 178 100-299 3-214 (225)
83 3qky_A Outer membrane assembly 99.5 4E-13 1.4E-17 116.3 19.1 162 134-299 12-225 (261)
84 4ga2_A E3 SUMO-protein ligase 99.5 2.2E-14 7.6E-19 113.9 10.0 129 107-243 3-144 (150)
85 3as5_A MAMA; tetratricopeptide 99.5 8.3E-13 2.8E-17 106.8 19.0 152 67-228 10-171 (186)
86 1hz4_A MALT regulatory protein 99.5 5.3E-12 1.8E-16 114.7 25.6 248 69-330 18-320 (373)
87 2ifu_A Gamma-SNAP; membrane fu 99.5 2.1E-12 7.2E-17 114.8 21.8 186 77-299 3-224 (307)
88 1xi4_A Clathrin heavy chain; a 99.5 4E-12 1.4E-16 129.7 26.0 214 98-332 1102-1345(1630)
89 4ga2_A E3 SUMO-protein ligase 99.5 3.9E-13 1.3E-17 106.7 12.9 128 76-209 8-146 (150)
90 3edt_B KLC 2, kinesin light ch 99.5 7.8E-13 2.7E-17 114.3 14.0 208 117-332 13-281 (283)
91 1hz4_A MALT regulatory protein 99.5 9.6E-12 3.3E-16 113.0 21.7 217 70-298 58-322 (373)
92 2r5s_A Uncharacterized protein 99.5 1.1E-12 3.6E-17 106.8 13.4 157 102-297 7-172 (176)
93 2ifu_A Gamma-SNAP; membrane fu 99.4 1.8E-12 6.1E-17 115.3 15.4 189 118-335 4-226 (307)
94 4gco_A Protein STI-1; structur 99.4 3.9E-12 1.3E-16 97.8 14.7 103 100-206 12-124 (126)
95 3dra_A Protein farnesyltransfe 99.4 8.5E-11 2.9E-15 104.1 25.1 229 68-307 35-297 (306)
96 2vsy_A XCC0866; transferase, g 99.4 5E-12 1.7E-16 121.9 18.5 153 78-240 2-169 (568)
97 2ooe_A Cleavage stimulation fa 99.4 1.3E-11 4.5E-16 117.9 20.9 206 122-334 255-494 (530)
98 2vsy_A XCC0866; transferase, g 99.4 1.9E-12 6.6E-17 124.8 15.0 142 119-265 3-156 (568)
99 3qou_A Protein YBBN; thioredox 99.4 6.3E-12 2.2E-16 110.7 16.8 158 100-297 116-283 (287)
100 4gco_A Protein STI-1; structur 99.4 5.7E-12 1.9E-16 96.9 14.4 104 136-243 12-125 (126)
101 3qou_A Protein YBBN; thioredox 99.4 8.8E-12 3E-16 109.8 15.7 162 120-316 101-270 (287)
102 2ooe_A Cleavage stimulation fa 99.4 3.4E-10 1.1E-14 108.1 27.7 212 82-303 255-497 (530)
103 2r5s_A Uncharacterized protein 99.4 2.9E-12 9.9E-17 104.2 11.4 157 138-329 7-170 (176)
104 2yhc_A BAMD, UPF0169 lipoprote 99.4 2.1E-11 7.1E-16 103.2 16.9 176 65-266 4-213 (225)
105 1xi4_A Clathrin heavy chain; a 99.4 6.3E-11 2.2E-15 121.0 22.9 228 72-336 1056-1313(1630)
106 3gyz_A Chaperone protein IPGC; 99.3 2.6E-11 8.8E-16 96.3 13.4 100 195-302 34-137 (151)
107 2qfc_A PLCR protein; TPR, HTH, 99.3 1.7E-10 5.8E-15 101.6 20.1 161 101-297 75-265 (293)
108 3gyz_A Chaperone protein IPGC; 99.3 5.5E-12 1.9E-16 100.2 8.9 91 100-194 35-133 (151)
109 4f3v_A ESX-1 secretion system 99.3 5.1E-12 1.7E-16 109.9 8.8 184 104-301 10-240 (282)
110 1hh8_A P67PHOX, NCF-2, neutrop 99.3 5.9E-11 2E-15 98.8 15.1 121 101-230 6-150 (213)
111 2qfc_A PLCR protein; TPR, HTH, 99.3 7.4E-11 2.5E-15 103.9 16.2 120 69-192 79-223 (293)
112 3u3w_A Transcriptional activat 99.3 1E-10 3.6E-15 102.9 16.9 159 72-265 82-265 (293)
113 1hh8_A P67PHOX, NCF-2, neutrop 99.3 1.4E-10 4.8E-15 96.5 16.3 127 137-300 6-152 (213)
114 1b89_A Protein (clathrin heavy 99.3 1.5E-11 5.3E-16 113.0 10.8 226 67-326 34-266 (449)
115 2fo7_A Synthetic consensus TPR 99.3 2.4E-10 8.2E-15 86.8 15.7 127 102-266 2-132 (136)
116 1b89_A Protein (clathrin heavy 99.3 3.5E-12 1.2E-16 117.2 6.1 221 77-336 15-240 (449)
117 1p5q_A FKBP52, FK506-binding p 99.3 2.3E-11 7.9E-16 109.6 10.9 132 79-220 127-283 (336)
118 3u3w_A Transcriptional activat 99.3 4.9E-10 1.7E-14 98.6 19.3 93 198-298 156-266 (293)
119 2fo7_A Synthetic consensus TPR 99.3 4.8E-10 1.6E-14 85.1 16.6 129 138-300 2-134 (136)
120 4gcn_A Protein STI-1; structur 99.2 1.6E-10 5.6E-15 88.7 13.2 109 100-237 7-120 (127)
121 3gw4_A Uncharacterized protein 99.2 2.1E-10 7E-15 94.4 14.3 85 76-166 3-95 (203)
122 1p5q_A FKBP52, FK506-binding p 99.2 1.9E-11 6.5E-16 110.1 7.8 158 119-297 127-293 (336)
123 1a17_A Serine/threonine protei 99.2 7.1E-10 2.4E-14 88.0 16.2 90 100-193 12-109 (166)
124 4gcn_A Protein STI-1; structur 99.2 2.7E-10 9.1E-15 87.5 12.9 96 196-299 7-113 (127)
125 2vgx_A Chaperone SYCD; alterna 99.2 2.8E-10 9.5E-15 89.9 13.1 105 187-299 9-119 (148)
126 2c2l_A CHIP, carboxy terminus 99.2 1.2E-10 4E-15 102.2 12.0 181 100-297 3-198 (281)
127 2vgx_A Chaperone SYCD; alterna 99.2 7.8E-11 2.7E-15 93.1 9.6 77 100-180 20-100 (148)
128 2c2l_A CHIP, carboxy terminus 99.2 1.6E-10 5.3E-15 101.4 12.3 182 136-331 3-198 (281)
129 3gw4_A Uncharacterized protein 99.2 1.6E-09 5.6E-14 88.9 16.9 149 118-298 5-176 (203)
130 3dss_A Geranylgeranyl transfer 99.2 1.6E-08 5.6E-13 90.1 24.2 233 77-311 41-317 (331)
131 4f3v_A ESX-1 secretion system 99.2 1E-09 3.5E-14 95.4 15.9 185 139-335 9-240 (282)
132 3upv_A Heat shock protein STI1 99.2 1.1E-09 3.9E-14 83.2 14.3 95 197-299 4-102 (126)
133 3upv_A Heat shock protein STI1 99.1 1.6E-09 5.5E-14 82.4 14.8 87 101-191 4-98 (126)
134 3sz7_A HSC70 cochaperone (SGT) 99.1 8.3E-10 2.8E-14 88.3 13.3 89 100-192 10-106 (164)
135 2xcb_A PCRH, regulatory protei 99.1 4.2E-10 1.4E-14 87.9 11.2 105 187-299 6-116 (142)
136 2lni_A Stress-induced-phosphop 99.1 8.2E-10 2.8E-14 84.1 12.6 108 67-180 18-129 (133)
137 2e2e_A Formate-dependent nitri 99.1 1E-09 3.5E-14 88.7 13.7 113 75-193 20-143 (177)
138 3dra_A Protein farnesyltransfe 99.1 9.8E-09 3.3E-13 90.9 21.0 210 120-335 48-291 (306)
139 3sz7_A HSC70 cochaperone (SGT) 99.1 6.7E-10 2.3E-14 88.8 12.2 110 65-180 11-124 (164)
140 2lni_A Stress-induced-phosphop 99.1 1.3E-09 4.4E-14 83.0 13.1 106 99-208 14-129 (133)
141 2fbn_A 70 kDa peptidylprolyl i 99.1 4.2E-10 1.4E-14 92.9 9.9 106 100-209 37-168 (198)
142 4b4t_Q 26S proteasome regulato 99.1 4.2E-09 1.4E-13 97.2 17.7 197 65-297 4-244 (434)
143 1a17_A Serine/threonine protei 99.1 3.4E-09 1.2E-13 83.9 14.8 118 170-295 14-143 (166)
144 2e2e_A Formate-dependent nitri 99.1 1.6E-09 5.5E-14 87.5 12.3 108 118-229 23-143 (177)
145 3ro3_A PINS homolog, G-protein 99.1 4.7E-09 1.6E-13 82.2 14.3 130 100-265 8-157 (164)
146 2vyi_A SGTA protein; chaperone 99.1 6E-09 2.1E-13 78.6 14.3 105 100-208 11-125 (131)
147 1kt0_A FKBP51, 51 kDa FK506-bi 99.0 5.4E-10 1.8E-14 104.9 9.4 106 100-209 267-397 (457)
148 1elw_A TPR1-domain of HOP; HOP 99.0 1.1E-08 3.6E-13 75.8 14.4 76 101-180 4-83 (118)
149 3ro3_A PINS homolog, G-protein 99.0 1.1E-08 3.7E-13 80.1 15.1 130 137-298 9-158 (164)
150 2fbn_A 70 kDa peptidylprolyl i 99.0 4E-10 1.4E-14 93.1 6.9 152 118-289 17-176 (198)
151 2xcb_A PCRH, regulatory protei 99.0 3.4E-09 1.2E-13 82.6 12.0 90 100-193 17-114 (142)
152 3q7a_A Farnesyltransferase alp 99.0 9.7E-08 3.3E-12 85.6 22.7 222 79-305 68-339 (349)
153 1hxi_A PEX5, peroxisome target 99.0 4.2E-09 1.4E-13 80.0 11.9 73 105-181 21-97 (121)
154 1na0_A Designed protein CTPR3; 99.0 1.8E-08 6.1E-13 75.3 15.2 103 101-207 9-121 (125)
155 1hxi_A PEX5, peroxisome target 99.0 2.8E-09 9.5E-14 81.0 10.3 95 199-301 19-117 (121)
156 1kt0_A FKBP51, 51 kDa FK506-bi 99.0 5.3E-10 1.8E-14 105.0 7.3 151 119-290 248-406 (457)
157 2vyi_A SGTA protein; chaperone 99.0 1.4E-08 4.9E-13 76.5 13.9 109 67-181 14-126 (131)
158 2dba_A Smooth muscle cell asso 99.0 3.5E-08 1.2E-12 76.4 16.4 103 100-206 27-142 (148)
159 3q49_B STIP1 homology and U bo 99.0 9.5E-09 3.2E-13 78.9 12.6 100 194-301 6-109 (137)
160 2hr2_A Hypothetical protein; a 99.0 5.2E-09 1.8E-13 82.8 11.1 98 197-302 11-135 (159)
161 3rkv_A Putative peptidylprolyl 99.0 1E-08 3.4E-13 81.7 12.9 100 196-303 10-131 (162)
162 3dss_A Geranylgeranyl transfer 99.0 1.4E-07 4.9E-12 84.0 21.6 211 121-335 46-307 (331)
163 1elw_A TPR1-domain of HOP; HOP 99.0 1.8E-08 6.1E-13 74.5 13.5 107 67-179 6-116 (118)
164 3q49_B STIP1 homology and U bo 99.0 1.7E-08 5.8E-13 77.4 13.6 89 100-192 8-104 (137)
165 1elr_A TPR2A-domain of HOP; HO 98.9 2.4E-08 8.3E-13 75.3 13.8 62 101-166 4-67 (131)
166 1na0_A Designed protein CTPR3; 98.9 2.5E-08 8.5E-13 74.5 13.5 108 67-180 11-122 (125)
167 2hr2_A Hypothetical protein; a 98.9 1.3E-08 4.4E-13 80.6 12.1 101 100-229 10-130 (159)
168 1elr_A TPR2A-domain of HOP; HO 98.9 3E-08 1E-12 74.8 13.1 109 197-313 4-124 (131)
169 2dba_A Smooth muscle cell asso 98.9 3.9E-08 1.3E-12 76.1 14.0 110 64-179 27-143 (148)
170 2xev_A YBGF; tetratricopeptide 98.9 1.6E-08 5.5E-13 76.7 11.4 91 71-165 8-104 (129)
171 2xev_A YBGF; tetratricopeptide 98.9 3.9E-08 1.3E-12 74.5 13.5 94 198-299 3-106 (129)
172 3rkv_A Putative peptidylprolyl 98.9 1.8E-08 6E-13 80.2 11.9 109 67-179 13-142 (162)
173 1ihg_A Cyclophilin 40; ppiase 98.9 2.1E-08 7.3E-13 91.3 14.0 105 101-209 223-353 (370)
174 2if4_A ATFKBP42; FKBP-like, al 98.9 6.2E-09 2.1E-13 93.7 10.2 96 235-335 232-331 (338)
175 2kck_A TPR repeat; tetratricop 98.9 1.4E-08 4.9E-13 74.4 10.4 98 195-300 4-108 (112)
176 1wao_1 Serine/threonine protei 98.9 1.6E-09 5.6E-14 102.2 5.5 114 104-225 9-134 (477)
177 2if4_A ATFKBP42; FKBP-like, al 98.9 1.1E-08 3.8E-13 92.0 10.6 148 136-301 178-331 (338)
178 2kck_A TPR repeat; tetratricop 98.8 2.7E-08 9.3E-13 72.9 10.3 97 100-230 5-106 (112)
179 3k9i_A BH0479 protein; putativ 98.8 1.6E-08 5.5E-13 75.9 8.5 81 79-165 4-89 (117)
180 1ihg_A Cyclophilin 40; ppiase 98.8 6.4E-08 2.2E-12 88.2 12.7 79 231-313 271-353 (370)
181 1dce_A Protein (RAB geranylger 98.8 3E-07 1E-11 88.4 17.5 163 121-287 45-244 (567)
182 3k9i_A BH0479 protein; putativ 98.7 4E-08 1.4E-12 73.7 8.7 92 214-309 3-103 (117)
183 1dce_A Protein (RAB geranylger 98.7 3.5E-07 1.2E-11 87.9 17.0 160 81-246 45-239 (567)
184 1na3_A Designed protein CTPR2; 98.7 1.6E-07 5.5E-12 66.3 11.1 77 100-180 8-88 (91)
185 3mv2_B Coatomer subunit epsilo 98.7 5.2E-07 1.8E-11 79.4 16.3 164 124-299 85-283 (310)
186 3q7a_A Farnesyltransferase alp 98.7 3.5E-06 1.2E-10 75.4 22.0 205 120-330 69-329 (349)
187 1zu2_A Mitochondrial import re 98.7 5.3E-08 1.8E-12 76.9 8.7 86 79-166 16-120 (158)
188 1wao_1 Serine/threonine protei 98.7 5.9E-08 2E-12 91.5 10.6 110 74-189 15-134 (477)
189 4b4t_Q 26S proteasome regulato 98.7 8.6E-07 2.9E-11 81.6 18.2 195 102-330 5-243 (434)
190 4e6h_A MRNA 3'-END-processing 98.7 1.4E-06 4.8E-11 85.3 20.2 206 123-335 327-573 (679)
191 2kat_A Uncharacterized protein 98.7 1.9E-07 6.6E-12 69.5 10.8 91 83-179 3-99 (115)
192 2l6j_A TPR repeat-containing p 98.7 2.5E-07 8.7E-12 67.8 11.0 78 100-181 3-90 (111)
193 1zu2_A Mitochondrial import re 98.7 2.3E-07 8E-12 73.2 11.1 94 119-230 16-120 (158)
194 3ma5_A Tetratricopeptide repea 98.6 3E-07 1E-11 66.9 10.9 77 99-179 5-87 (100)
195 3mv2_B Coatomer subunit epsilo 98.6 4E-06 1.4E-10 73.7 18.2 165 84-267 85-283 (310)
196 2kat_A Uncharacterized protein 98.5 2.2E-06 7.5E-11 63.6 12.6 71 123-193 3-81 (115)
197 2l6j_A TPR repeat-containing p 98.5 1.2E-07 4.2E-12 69.6 4.3 87 197-291 4-100 (111)
198 3ma5_A Tetratricopeptide repea 98.4 2.7E-06 9.1E-11 61.7 10.8 66 229-298 3-70 (100)
199 1na3_A Designed protein CTPR2; 98.4 3.1E-06 1E-10 59.5 10.3 76 197-280 9-88 (91)
200 4e6h_A MRNA 3'-END-processing 98.4 6E-05 2E-09 73.8 22.6 206 82-300 326-572 (679)
201 2v5f_A Prolyl 4-hydroxylase su 98.4 3E-06 1E-10 62.1 10.1 73 100-176 4-87 (104)
202 3n71_A Histone lysine methyltr 98.2 2.3E-05 7.7E-10 73.8 15.2 125 144-297 316-463 (490)
203 3n71_A Histone lysine methyltr 98.2 5.7E-05 1.9E-09 71.1 17.1 85 76-164 320-420 (490)
204 2v5f_A Prolyl 4-hydroxylase su 98.1 3.5E-05 1.2E-09 56.3 10.3 76 233-312 5-91 (104)
205 2kc7_A BFR218_protein; tetratr 98.1 1.9E-05 6.5E-10 56.5 8.6 79 105-191 4-87 (99)
206 2kc7_A BFR218_protein; tetratr 98.0 7.2E-06 2.5E-10 58.8 5.7 59 238-300 5-66 (99)
207 3u64_A Protein TP_0956; tetrat 98.0 0.00013 4.4E-09 63.0 14.2 90 211-300 173-271 (301)
208 1pc2_A Mitochondria fission pr 98.0 5.7E-05 1.9E-09 58.9 10.8 99 215-314 12-118 (152)
209 3ly7_A Transcriptional activat 98.0 0.00024 8.4E-09 63.6 16.1 152 90-268 185-341 (372)
210 3ly7_A Transcriptional activat 97.9 0.00055 1.9E-08 61.3 16.7 70 230-303 274-344 (372)
211 1pc2_A Mitochondria fission pr 97.8 0.00027 9.1E-09 55.1 11.3 76 99-175 30-111 (152)
212 3qww_A SET and MYND domain-con 97.8 0.00011 3.7E-09 68.1 10.0 80 214-297 311-410 (433)
213 3bee_A Putative YFRE protein; 97.8 0.00012 4E-09 52.4 8.1 71 230-301 3-75 (93)
214 3bee_A Putative YFRE protein; 97.8 0.00017 5.7E-09 51.6 8.8 69 99-168 4-74 (93)
215 3qww_A SET and MYND domain-con 97.7 0.00018 6.1E-09 66.6 11.1 84 77-164 310-409 (433)
216 4g26_A Pentatricopeptide repea 97.7 0.0045 1.6E-07 58.3 20.6 110 182-299 87-205 (501)
217 3u64_A Protein TP_0956; tetrat 97.6 0.00019 6.5E-09 62.0 8.8 113 79-191 177-295 (301)
218 3qwp_A SET and MYND domain-con 97.5 0.00031 1.1E-08 65.0 8.5 75 119-193 301-399 (429)
219 3qwp_A SET and MYND domain-con 97.4 0.0011 3.8E-08 61.2 12.0 80 214-297 300-399 (429)
220 4g26_A Pentatricopeptide repea 97.4 0.061 2.1E-06 50.6 23.4 163 63-230 23-204 (501)
221 3ffl_A Anaphase-promoting comp 97.3 0.0022 7.6E-08 50.3 10.1 108 68-179 23-165 (167)
222 1nzn_A CGI-135 protein, fissio 97.1 0.0085 2.9E-07 44.9 11.5 98 216-314 16-121 (126)
223 2uy1_A Cleavage stimulation fa 96.9 0.044 1.5E-06 51.4 16.9 167 121-295 195-380 (493)
224 2uy1_A Cleavage stimulation fa 96.9 0.091 3.1E-06 49.3 19.1 155 66-230 15-242 (493)
225 1nzn_A CGI-135 protein, fissio 96.5 0.058 2E-06 40.3 11.5 76 99-175 33-114 (126)
226 3o48_A Mitochondria fission 1 96.2 0.038 1.3E-06 41.6 9.0 84 231-315 38-126 (134)
227 4ady_A RPN2, 26S proteasome re 95.7 0.41 1.4E-05 48.1 16.7 194 89-300 364-591 (963)
228 1y8m_A FIS1; mitochondria, unk 95.7 0.13 4.4E-06 39.2 10.2 84 230-314 36-124 (144)
229 3ffl_A Anaphase-promoting comp 95.6 0.077 2.6E-06 41.6 9.0 115 119-244 34-166 (167)
230 4h7y_A Dual specificity protei 94.7 0.09 3.1E-06 40.5 6.7 101 191-300 7-125 (161)
231 3mkq_A Coatomer beta'-subunit; 94.6 2.4 8.1E-05 41.6 18.8 128 141-294 633-761 (814)
232 1y8m_A FIS1; mitochondria, unk 94.4 0.85 2.9E-05 34.7 11.6 76 98-174 36-116 (144)
233 3o48_A Mitochondria fission 1 94.0 0.75 2.6E-05 34.5 10.3 78 98-176 37-119 (134)
234 1ya0_A SMG-7 transcript varian 93.3 0.42 1.4E-05 44.7 9.8 75 103-181 154-232 (497)
235 3txn_A 26S proteasome regulato 91.8 7 0.00024 35.2 16.2 91 199-297 101-209 (394)
236 1ya0_A SMG-7 transcript varian 91.6 1 3.5E-05 42.1 10.1 71 201-279 156-230 (497)
237 3mkq_A Coatomer beta'-subunit; 89.9 9 0.00031 37.4 15.8 27 136-162 680-706 (814)
238 2wpv_A GET4, UPF0363 protein Y 89.1 11 0.00036 32.8 16.0 127 66-225 14-158 (312)
239 3mkq_B Coatomer subunit alpha; 88.2 8.2 0.00028 30.4 15.1 54 100-163 7-60 (177)
240 1wy6_A Hypothetical protein ST 86.2 5.9 0.0002 30.0 8.7 140 150-310 20-166 (172)
241 4h7y_A Dual specificity protei 85.1 9.7 0.00033 29.3 9.7 33 134-166 10-48 (161)
242 3lpz_A GET4 (YOR164C homolog); 85.0 16 0.00055 32.0 12.5 39 182-224 119-159 (336)
243 1wy6_A Hypothetical protein ST 84.8 4.4 0.00015 30.7 7.5 40 136-175 124-163 (172)
244 3mkq_B Coatomer subunit alpha; 82.4 16 0.00056 28.7 14.7 83 195-294 32-114 (177)
245 2wpv_A GET4, UPF0363 protein Y 79.5 30 0.001 29.9 15.8 133 120-261 12-158 (312)
246 1qsa_A Protein (soluble lytic 78.5 41 0.0014 32.2 13.8 123 69-194 218-348 (618)
247 3ubw_A 14-3-3E, 14-3-3 protein 78.0 30 0.001 29.0 15.2 46 136-181 30-78 (261)
248 1o9d_A 14-3-3-like protein C; 76.0 34 0.0012 28.7 15.1 45 253-297 151-206 (260)
249 4b4t_R RPN7, 26S proteasome re 75.3 8.5 0.00029 35.0 7.9 92 198-297 132-236 (429)
250 2w2u_A Hypothetical P60 katani 74.8 3.4 0.00012 28.1 3.8 32 121-165 16-47 (83)
251 2v6y_A AAA family ATPase, P60 74.0 3.7 0.00013 27.9 3.8 31 122-165 9-39 (83)
252 3spa_A Mtrpol, DNA-directed RN 73.3 45 0.0015 34.1 12.7 119 200-330 130-259 (1134)
253 3iqu_A 14-3-3 protein sigma; s 72.3 40 0.0014 27.8 16.3 46 252-297 148-204 (236)
254 4ady_A RPN2, 26S proteasome re 69.9 97 0.0033 31.3 20.6 220 82-317 428-681 (963)
255 4gns_B Protein CSD3, chitin bi 69.6 42 0.0014 32.9 11.6 43 252-294 352-396 (754)
256 3uzd_A 14-3-3 protein gamma; s 69.3 48 0.0016 27.5 14.9 46 252-297 146-202 (248)
257 3kae_A CDC27, possible protein 67.6 43 0.0015 26.3 12.0 69 119-192 16-89 (242)
258 1wfd_A Hypothetical protein 15 64.5 8.1 0.00028 26.8 4.0 35 118-165 9-43 (93)
259 3lpz_A GET4 (YOR164C homolog); 64.3 73 0.0025 27.8 16.4 133 119-260 10-159 (336)
260 2br9_A 14-3-3E, 14-3-3 protein 63.9 60 0.0021 26.7 14.2 46 252-297 145-201 (234)
261 2w2u_A Hypothetical P60 katani 63.3 12 0.00042 25.3 4.7 32 253-297 16-47 (83)
262 3kae_A CDC27, possible protein 63.1 54 0.0018 25.8 10.9 26 273-298 118-143 (242)
263 2v6y_A AAA family ATPase, P60 62.1 13 0.00045 25.1 4.7 31 254-297 9-39 (83)
264 4a5x_A MITD1, MIT domain-conta 62.0 34 0.0012 23.2 7.4 33 252-297 12-44 (86)
265 2ff4_A Probable regulatory pro 60.8 34 0.0011 30.5 8.5 53 139-191 173-231 (388)
266 2v6x_A Vacuolar protein sortin 59.0 11 0.00037 25.6 3.8 33 120-165 9-41 (85)
267 3spa_A Mtrpol, DNA-directed RN 58.4 36 0.0012 34.8 8.8 93 235-331 129-229 (1134)
268 3re2_A Predicted protein; meni 58.3 26 0.00088 31.0 6.7 65 231-297 253-324 (472)
269 3txn_A 26S proteasome regulato 58.3 32 0.0011 30.9 7.8 54 106-163 104-165 (394)
270 2ff4_A Probable regulatory pro 57.5 94 0.0032 27.5 10.9 60 234-297 172-233 (388)
271 4b4t_R RPN7, 26S proteasome re 56.9 39 0.0013 30.5 8.3 59 101-163 131-194 (429)
272 2cpt_A SKD1 protein, vacuolar 56.3 54 0.0018 23.7 7.5 32 253-297 15-46 (117)
273 4b4t_P 26S proteasome regulato 56.1 1.1E+02 0.0037 27.7 11.2 93 198-298 138-247 (445)
274 4fhn_B Nucleoporin NUP120; pro 55.1 1.9E+02 0.0066 29.7 15.7 63 100-166 841-928 (1139)
275 3t5x_A PCI domain-containing p 54.8 12 0.0004 30.2 4.0 26 273-298 18-43 (203)
276 1wfd_A Hypothetical protein 15 54.8 49 0.0017 22.7 7.9 33 252-297 11-43 (93)
277 4gns_B Protein CSD3, chitin bi 53.9 19 0.00066 35.3 6.0 47 77-129 349-395 (754)
278 2npm_A 14-3-3 domain containin 53.8 97 0.0033 25.9 15.1 46 252-297 171-226 (260)
279 4a5x_A MITD1, MIT domain-conta 53.4 14 0.00049 25.1 3.7 34 119-165 11-44 (86)
280 2cpt_A SKD1 protein, vacuolar 53.0 11 0.00037 27.5 3.1 32 121-165 15-46 (117)
281 3u84_A Menin; MLL, JUND, ledgf 51.5 36 0.0012 30.6 6.7 65 231-297 275-346 (550)
282 3bge_A Predicted ATPase; struc 50.7 94 0.0032 24.8 8.6 25 183-207 65-89 (201)
283 3re2_A Predicted protein; meni 49.7 83 0.0028 27.8 8.5 72 92-165 246-324 (472)
284 4aez_C MAD3, mitotic spindle c 49.5 1.1E+02 0.0036 25.0 10.5 31 136-166 149-179 (223)
285 2r9g_A AAA ATPase, central reg 49.5 61 0.0021 26.0 7.1 76 121-206 14-94 (204)
286 2dl1_A Spartin; SPG20, MIT, st 48.1 15 0.00051 26.6 3.1 32 120-164 18-49 (116)
287 4a1g_A Mitotic checkpoint seri 46.8 93 0.0032 23.6 9.8 43 124-166 84-130 (152)
288 2wvi_A Mitotic checkpoint seri 45.7 1E+02 0.0035 23.8 9.9 32 136-167 95-126 (164)
289 3ctd_A Putative ATPase, AAA fa 42.9 98 0.0033 25.0 7.5 75 123-206 37-116 (213)
290 4gq4_A Menin; tumor suppressor 42.7 62 0.0021 29.2 6.8 64 232-297 261-331 (489)
291 3u84_A Menin; MLL, JUND, ledgf 42.2 1.4E+02 0.0047 27.0 8.9 73 91-165 267-346 (550)
292 4gq4_A Menin; tumor suppressor 40.0 1.3E+02 0.0046 27.1 8.5 74 90-165 251-331 (489)
293 4gq2_M Nucleoporin NUP120; bet 39.1 73 0.0025 32.2 7.8 37 90-132 831-867 (950)
294 2dl1_A Spartin; SPG20, MIT, st 38.9 94 0.0032 22.4 6.1 33 252-297 18-50 (116)
295 2npu_A FKBP12-rapamycin comple 36.8 54 0.0018 24.1 4.7 18 119-136 88-105 (126)
296 1qsa_A Protein (soluble lytic 36.3 2.9E+02 0.0098 26.3 20.5 112 182-298 231-348 (618)
297 3o10_A Sacsin; all-helical dom 36.2 72 0.0025 23.7 5.6 43 117-165 2-44 (141)
298 2ymb_A MITD1, MIT domain-conta 35.9 7.7 0.00026 32.5 0.0 41 113-166 12-52 (257)
299 1zbp_A Hypothetical protein VP 35.4 61 0.0021 27.3 5.4 48 119-166 11-60 (273)
300 3o10_A Sacsin; all-helical dom 34.9 1.1E+02 0.0038 22.7 6.5 67 213-290 2-69 (141)
301 3ltm_A Alpha-REP4; protein eng 34.8 1.6E+02 0.0054 22.8 13.7 14 256-269 144-157 (211)
302 4fhn_B Nucleoporin NUP120; pro 32.5 86 0.0029 32.4 7.2 93 195-295 840-964 (1139)
303 2crb_A Nuclear receptor bindin 31.1 83 0.0028 21.7 4.5 25 140-164 18-42 (97)
304 2v6x_A Vacuolar protein sortin 30.5 1.2E+02 0.0041 20.1 7.5 33 252-297 9-41 (85)
305 2ijq_A Hypothetical protein; s 29.2 1.1E+02 0.0039 23.4 5.6 65 67-133 34-103 (161)
306 3ax2_A Mitochondrial import re 28.0 1.1E+02 0.0039 19.9 4.7 25 142-166 22-46 (73)
307 2rpa_A Katanin P60 ATPase-cont 27.1 42 0.0014 22.3 2.5 25 141-165 16-40 (78)
308 1zbp_A Hypothetical protein VP 26.0 65 0.0022 27.2 4.0 50 252-301 12-63 (273)
309 3fap_B FRAP, FKBP12-rapamycin 25.9 1.4E+02 0.0047 20.6 5.1 18 119-136 58-75 (94)
310 3esl_A Checkpoint serine/threo 22.9 2.5E+02 0.0085 22.4 6.7 48 252-299 94-145 (202)
311 3eab_A Spastin; spastin, MIT, 21.3 39 0.0013 23.1 1.5 15 283-297 33-47 (89)
312 3ctd_A Putative ATPase, AAA fa 20.7 2.4E+02 0.0081 22.7 6.2 29 214-242 88-116 (213)
No 1
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=100.00 E-value=9.4e-34 Score=267.14 Aligned_cols=253 Identities=18% Similarity=0.163 Sum_probs=231.2
Q ss_pred CChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHH--HHHHHHHhcC----
Q 019734 77 TLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM--VDAGLMYWEM---- 150 (336)
Q Consensus 77 ~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~--~~lg~~~~~~---- 150 (336)
..+.++++......+.+.+.. +++.+++.||.+|.. .|+.+++++|+.||+++++.+++.+. ++||.+|..+
T Consensus 153 ~~~~~~~~~~~a~~~~~~a~~-~~~~a~~~Lg~~~~~-~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~ 230 (452)
T 3e4b_A 153 TQGTYDQHLDDVERICKAALN-TTDICYVELATVYQK-KQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGT 230 (452)
T ss_dssp HHTCGGGGHHHHHHHHHHHTT-TCTTHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSS
T ss_pred cCCCcccCHHHHHHHHHHHHc-CCHHHHHHHHHHHHH-cCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCC
Confidence 334455555555556555443 577799999999999 77777999999999999999877776 9999999887
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHH
Q 019734 151 DKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223 (336)
Q Consensus 151 ~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~-------~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~ 223 (336)
+|+++|+.+|++++ .+++.++++||.+|.. ++|+.+|+++++.+++.++++||.+|..|.|+.+|+++|+.|
T Consensus 231 ~d~~~A~~~~~~aa-~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~ 309 (452)
T 3e4b_A 231 PDEKTAQALLEKIA-PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAADQPRAELLLGKLYYEGKWVPADAKAAEAH 309 (452)
T ss_dssp CCHHHHHHHHHHHG-GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHc-CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 89999999999999 9999999999999663 999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHhhc----cCCHHHHHHHHHHHHHcC
Q 019734 224 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAG 299 (336)
Q Consensus 224 ~~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~----~~~~~~A~~~~~~A~~~~ 299 (336)
|++|+ .+++.++++||.+|..|.|+++|+++|+.||+++++.|++.++++||.+|.. ..|+++|..||++|++.|
T Consensus 310 ~~~Aa-~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g 388 (452)
T 3e4b_A 310 FEKAV-GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQD 388 (452)
T ss_dssp HHTTT-TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTCTTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTTC
T ss_pred HHHHh-CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhChHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHCC
Confidence 99999 9999999999999999999999999999999999999999999999999885 459999999999999999
Q ss_pred cHHHHHHHHHHHhhcChhcHHHHHHHHHHhhcCC
Q 019734 300 ETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 333 (336)
Q Consensus 300 ~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 333 (336)
++.+...+..+...+++.++++++.++++|++.+
T Consensus 389 ~~~a~~~l~~l~~~~~~~~~~~a~~~~~~~~~~~ 422 (452)
T 3e4b_A 389 TPEANDLATQLEAPLTPAQRAEGQRLVQQELAAR 422 (452)
T ss_dssp CHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999998764
No 2
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=100.00 E-value=3.8e-31 Score=251.55 Aligned_cols=248 Identities=25% Similarity=0.316 Sum_probs=170.8
Q ss_pred ChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhc----CCCH
Q 019734 78 LPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKK 153 (336)
Q Consensus 78 ~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~----~~~~ 153 (336)
.+++.+|.. |++.+.+.+++.+++.||.+|..|.|+.+|+++|+.||++|++.+++.+++.||.+|.. .+++
T Consensus 56 ~~~~~~A~~----~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~ 131 (490)
T 2xm6_A 56 TKDLTQAMD----WFRRAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGNGVKVDK 131 (490)
T ss_dssp CCCHHHHHH----HHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCH
T ss_pred CcCHHHHHH----HHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCH
Confidence 566777753 33333334677777777777777777777777777777777777777777777777776 5677
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--------HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHH
Q 019734 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225 (336)
Q Consensus 154 ~~A~~~~~~a~~~~~~~a~~~Lg~~~~~--------~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~ 225 (336)
++|+.+|+++++.+++.++++||.+|.. ++|+.+|+++++.+++.++++||.+|..|.|+.+|+++|+.||+
T Consensus 132 ~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~ 211 (490)
T 2xm6_A 132 AESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNVWSCNQLGYMYSRGLGVERNDAISAQWYR 211 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCCcCHHHHHHHHH
Confidence 7777777777777777777777777764 67777777777777777777777777777777777777777777
Q ss_pred HHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHhhc----cCCHHHHHHHHHHHHHcCcH
Q 019734 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGET 301 (336)
Q Consensus 226 ~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~----~~~~~~A~~~~~~A~~~~~~ 301 (336)
++++.+++.+++.||.+|..|.|+.+++++|+.||+++++.+++.++++||.+|.. .+++++|+.||+++++.+++
T Consensus 212 ~a~~~~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~~~~ 291 (490)
T 2xm6_A 212 KSATSGDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQGNS 291 (490)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTTTCH
T ss_pred HHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHcCCH
Confidence 77777777777777777766666666777777777777666666666666666666 66666666666666666666
Q ss_pred HHHHHHHHHHhhc---ChhcHHHHHHHHHHh
Q 019734 302 AADHVKNVILQQL---SATSRDRAMLVVDSW 329 (336)
Q Consensus 302 ~a~~~~~~~~~~~---~~~~~~~a~~~~~~~ 329 (336)
.+...++.++... .+.+.++|....++.
T Consensus 292 ~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a 322 (490)
T 2xm6_A 292 DGQYYLAHLYDKGAEGVAKNREQAISWYTKS 322 (490)
T ss_dssp HHHHHHHHHHHHCBTTBCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 6666666665543 124455555544443
No 3
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=100.00 E-value=3.1e-31 Score=232.57 Aligned_cols=246 Identities=20% Similarity=0.248 Sum_probs=229.6
Q ss_pred hHHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 019734 65 PFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG 144 (336)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg 144 (336)
+......+..++..+++++|...+.+..+ .+++.+++.||.+|..|.|+.+++++|+.+|+++++.+++.+++.+|
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~----~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg 81 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD----LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLG 81 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 44556677777888999999877777666 45899999999999999999999999999999999999999999999
Q ss_pred HHHhc----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--------HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCC
Q 019734 145 LMYWE----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212 (336)
Q Consensus 145 ~~~~~----~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~--------~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g 212 (336)
.+|.. .+++++|+.+|+++++.+++.++++||.+|.. ++|+.+|+++++.+++.+++++|.+|..|.+
T Consensus 82 ~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~ 161 (273)
T 1ouv_A 82 NLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG 161 (273)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSS
T ss_pred HHHhCCCCcccCHHHHHHHHHHHHHcCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCCC
Confidence 99999 99999999999999999999999999999986 9999999999999999999999999999999
Q ss_pred CccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHhhc----cCCHHHH
Q 019734 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKA 288 (336)
Q Consensus 213 ~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~----~~~~~~A 288 (336)
+.+++++|+.+|+++++.+++.+++++|.+|..|.++.+++++|+.+|+++++.+++.++++||.+|.. .+++++|
T Consensus 162 ~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~l~~~~~~g~~~~~~~~~A 241 (273)
T 1ouv_A 162 TPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQA 241 (273)
T ss_dssp SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSSCCSTTH
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCCCcccCHHHH
Confidence 999999999999999999999999999999999888889999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHcCcHHHHHHHHHHHhhc
Q 019734 289 VVYLELATRAGETAADHVKNVILQQL 314 (336)
Q Consensus 289 ~~~~~~A~~~~~~~a~~~~~~~~~~~ 314 (336)
+.+|++|++.+++.+...+..+....
T Consensus 242 ~~~~~~a~~~~~~~a~~~l~~~~~~~ 267 (273)
T 1ouv_A 242 IENFKKGCKLGAKGACDILKQLKIKV 267 (273)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 99999999999999999887664443
No 4
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=100.00 E-value=7.7e-31 Score=249.47 Aligned_cols=250 Identities=18% Similarity=0.196 Sum_probs=225.8
Q ss_pred ChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhc----CCCH
Q 019734 78 LPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKK 153 (336)
Q Consensus 78 ~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~----~~~~ 153 (336)
.+++.+|. .|++++.+.+++.+++.||.+|..|.|+.+|+++|+.+|+++++.+++.+++.||.+|.. .+++
T Consensus 92 ~~~~~~A~----~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~d~ 167 (490)
T 2xm6_A 92 PQDYAQAV----IWYKKAALKGLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDY 167 (490)
T ss_dssp CCCHHHHH----HHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCH
T ss_pred CCCHHHHH----HHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCH
Confidence 67888885 555555556799999999999999999999999999999999999999999999999988 6899
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--------HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHH
Q 019734 154 EAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225 (336)
Q Consensus 154 ~~A~~~~~~a~~~~~~~a~~~Lg~~~~~--------~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~ 225 (336)
++|+.+|+++++.+++.+++.||.+|.. ++|+.+|+++++.+++.+++.||.+|..|.|+.+|+++|+.+|+
T Consensus 168 ~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~ 247 (490)
T 2xm6_A 168 VMAREWYSKAAEQGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSGDELGQLHLADMYYFGIGVTQDYTQSRVLFS 247 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999986 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHhhcc-----CCHHHHHHHHHHHHHcCc
Q 019734 226 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE-----GEMMKAVVYLELATRAGE 300 (336)
Q Consensus 226 ~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~-----~~~~~A~~~~~~A~~~~~ 300 (336)
++++.+++.++++||.+|..|.|+.+++++|+.||+++++.+++.++++||.+|... +++++|+.||+++++.++
T Consensus 248 ~a~~~~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~~ 327 (490)
T 2xm6_A 248 QSAEQGNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQGNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGD 327 (490)
T ss_dssp HHHTTTCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcCC
Confidence 999999999999999999998888999999999999999999999999999999887 899999999999999999
Q ss_pred HHHHHHHHHHHhhc-ChhcHHHHHHHHHHhhc
Q 019734 301 TAADHVKNVILQQL-SATSRDRAMLVVDSWRA 331 (336)
Q Consensus 301 ~~a~~~~~~~~~~~-~~~~~~~a~~~~~~~~~ 331 (336)
+.+...++.++... ...+.++|....++..+
T Consensus 328 ~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~ 359 (490)
T 2xm6_A 328 ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAA 359 (490)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHH
Confidence 99999999888765 24467778777766554
No 5
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.97 E-value=1.9e-30 Score=219.93 Aligned_cols=190 Identities=19% Similarity=0.122 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------HHHHHHHHHHHHc
Q 019734 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-------EEAVKLLYQASIA 194 (336)
Q Consensus 122 ~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~-------~~A~~~~~ka~~~ 194 (336)
++|+.+|+++++.+++.+++.||.+|...+++++|+.+|+++++.+++.++++||.+|.. ++|+.+|+++++.
T Consensus 3 ~eA~~~~~~aa~~g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~ 82 (212)
T 3rjv_A 3 TEPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEA 82 (212)
T ss_dssp -CTTHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHC
Confidence 467888888888888888888888888888888888888888888888888888888875 8888889999888
Q ss_pred CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCCC----HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc-CCH
Q 019734 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY----VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC-GHG 269 (336)
Q Consensus 195 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~~----~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~-~~~ 269 (336)
+++.++++||.+|..|.|+.+|+++|+.||+++++.++ +.++++||.+|..|.|+++|+++|+.||+++++. +++
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~ 162 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTG 162 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTSCTT
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999999999999988 8999999999999988999999999999999997 889
Q ss_pred HHHHHHHHHhhcc-C-----CHHHHHHHHHHHHHcCcHHHHHHHHHHH
Q 019734 270 KAQLEHGLGLFTE-G-----EMMKAVVYLELATRAGETAADHVKNVIL 311 (336)
Q Consensus 270 ~a~~~lg~~~~~~-~-----~~~~A~~~~~~A~~~~~~~a~~~~~~~~ 311 (336)
.++++||.+|... | |+++|+.||++|++.|++.++..+..+.
T Consensus 163 ~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~A~~~l~~l~ 210 (212)
T 3rjv_A 163 YAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFDRIS 210 (212)
T ss_dssp HHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHhh
Confidence 9999999988753 3 8999999999999999999998887654
No 6
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.97 E-value=7.5e-29 Score=217.34 Aligned_cols=233 Identities=15% Similarity=0.159 Sum_probs=216.0
Q ss_pred CCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHcCCHHHHH
Q 019734 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAGQF 173 (336)
Q Consensus 98 ~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~----~~~~~~A~~~~~~a~~~~~~~a~~ 173 (336)
.+++.+++.+|.+|.. .+++++|+.+|+++++.+++.+++.+|.+|.. .+++++|+.+|+++++.+++.+++
T Consensus 3 ~~~~~a~~~lg~~~~~----~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~ 78 (273)
T 1ouv_A 3 EQDPKELVGLGAKSYK----EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 78 (273)
T ss_dssp --CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCChHHHHHHHHHHHh----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHH
Confidence 4689999999999999 48999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHH--------HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHc
Q 019734 174 NLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 245 (336)
Q Consensus 174 ~Lg~~~~~--------~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~ 245 (336)
+||.+|.. ++|+.+|+++++.+++.++++||.+|..|.++.+++++|+.+|+++++.+++.+++++|.+|..
T Consensus 79 ~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 79 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDA 158 (273)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCcccCHHHHHHHHHHHHHcCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 99999986 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHhhc----cCCHHHHHHHHHHHHHcCcHHHHHHHHHHHhhc--ChhcH
Q 019734 246 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVILQQL--SATSR 319 (336)
Q Consensus 246 ~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~----~~~~~~A~~~~~~A~~~~~~~a~~~~~~~~~~~--~~~~~ 319 (336)
+.++.+++++|+.+|+++++.+++.++++||.+|.. .+++++|+.+|+++++.+++.+...++.++... ...+.
T Consensus 159 ~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~l~~~~~~g~~~~~~~ 238 (273)
T 1ouv_A 159 GRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNE 238 (273)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSSCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCCCcccCH
Confidence 888888999999999999999999999999999999 999999999999999999999999999888762 24567
Q ss_pred HHHHHHHHHhhcCCC
Q 019734 320 DRAMLVVDSWRAMPS 334 (336)
Q Consensus 320 ~~a~~~~~~~~~~~~ 334 (336)
++|....++..+..|
T Consensus 239 ~~A~~~~~~a~~~~~ 253 (273)
T 1ouv_A 239 KQAIENFKKGCKLGA 253 (273)
T ss_dssp TTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 778777777665444
No 7
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.97 E-value=8.9e-29 Score=209.59 Aligned_cols=185 Identities=18% Similarity=0.133 Sum_probs=175.1
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCC----CHHHHHHHHHHHH
Q 019734 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAA 164 (336)
Q Consensus 89 ~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~----~~~~A~~~~~~a~ 164 (336)
..|++.+.+.+++.+++.||.+|.. .+|+++|+.||++|++.+++.++++||.+|.. + |+++|+.+|++++
T Consensus 6 ~~~~~~aa~~g~~~a~~~lg~~~~~----~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~ 80 (212)
T 3rjv_A 6 GSQYQQQAEAGDRRAQYYLADTWVS----SGDYQKAEYWAQKAAAQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAV 80 (212)
T ss_dssp THHHHHHHHTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHH
Confidence 3667777777899999999999999 58999999999999999999999999999998 6 9999999999999
Q ss_pred HcCCHHHHHHHHHHHHH--------HHHHHHHHHHHHcCC----HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC-C
Q 019734 165 VLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGH----VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG-G 231 (336)
Q Consensus 165 ~~~~~~a~~~Lg~~~~~--------~~A~~~~~ka~~~~~----~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~-~ 231 (336)
+.+++.++++||.+|.. ++|+.+|+++++.++ +.++++||.+|..|.|+.+|+++|+.||+++++. +
T Consensus 81 ~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 160 (212)
T 3rjv_A 81 EAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSR 160 (212)
T ss_dssp HTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTSC
T ss_pred HCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcCC
Confidence 99999999999999975 999999999999998 9999999999999999999999999999999998 8
Q ss_pred CHHHHHHHHHHHHcCCC--CcccHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 019734 232 YVRAMYNTSLCYSFGEG--LPLSHRQARKWMKRAADCGHGKAQLEHGLG 278 (336)
Q Consensus 232 ~~~a~~~lg~~~~~~~g--~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~ 278 (336)
++.++++||.+|..|.| +++|+++|+.||++|++.|+..++..|+.+
T Consensus 161 ~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~A~~~l~~l 209 (212)
T 3rjv_A 161 TGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFDRI 209 (212)
T ss_dssp TTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 99999999999999977 899999999999999999999999998864
No 8
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.96 E-value=1.8e-27 Score=224.25 Aligned_cols=223 Identities=15% Similarity=0.050 Sum_probs=196.4
Q ss_pred HHHhcCCCh---hHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 019734 71 KIAASFTLP---QLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147 (336)
Q Consensus 71 ~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~ 147 (336)
.+..+...| ++.+|+..+++..+..+. .+..++.||.+|..|.|+.+|+++|+.||++++ .+++.++++||.+|
T Consensus 182 Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~--~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g~~~a~~~Lg~~~ 258 (452)
T 3e4b_A 182 LATVYQKKQQPEQQAELLKQMEAGVSRGTV--TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PGYPASWVSLAQLL 258 (452)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTTCS--CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GGSTHHHHHHHHHH
T ss_pred HHHHHHHcCCcccHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CCCHHHHHHHHHHH
Confidence 333333466 888997555555544333 455559999999999999999999999999999 99999999999994
Q ss_pred h---cCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--------HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccC
Q 019734 148 W---EMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ--------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216 (336)
Q Consensus 148 ~---~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~--------~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~ 216 (336)
+ ..+|+++|+.+|+++++.+++.++++||.+|.. ++|+.||++|+ .+++.++++||.+|..|.|+.+|
T Consensus 259 ~~~~~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa-~g~~~A~~~Lg~~y~~G~g~~~d 337 (452)
T 3e4b_A 259 YDFPELGDVEQMMKYLDNGRAADQPRAELLLGKLYYEGKWVPADAKAAEAHFEKAV-GREVAADYYLGQIYRRGYLGKVY 337 (452)
T ss_dssp HHSGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHTTT-TTCHHHHHHHHHHHHTTTTSSCC
T ss_pred HhCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHh-CCCHHHHHHHHHHHHCCCCCCcC
Confidence 4 568999999999999999999999999999986 99999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHhhc--cCCHHHHHHHHHH
Q 019734 217 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT--EGEMMKAVVYLEL 294 (336)
Q Consensus 217 ~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~--~~~~~~A~~~~~~ 294 (336)
+++|+.||+++++.+++.++++||.+|..|.|+++|..+|..||++|++.|++.+...++.+... ..+..+|....++
T Consensus 338 ~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g~~~a~~~l~~l~~~~~~~~~~~a~~~~~~ 417 (452)
T 3e4b_A 338 PQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQDTPEANDLATQLEAPLTPAQRAEGQRLVQQ 417 (452)
T ss_dssp HHHHHHHHHHHHTTTCTTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhChHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987654 3477777777776
Q ss_pred HHH
Q 019734 295 ATR 297 (336)
Q Consensus 295 A~~ 297 (336)
...
T Consensus 418 ~~~ 420 (452)
T 3e4b_A 418 ELA 420 (452)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 9
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.91 E-value=2.1e-23 Score=164.37 Aligned_cols=136 Identities=20% Similarity=0.167 Sum_probs=117.4
Q ss_pred hcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Q 019734 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQA 191 (336)
Q Consensus 112 ~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~~~A~~~~~ka 191 (336)
..|.|+++|+++|+.||+++++.+++.++ ||.+|..++..++|+.||++|++.
T Consensus 2 ~~G~g~~~d~~~A~~~~~~aa~~g~~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~------------------------- 54 (138)
T 1klx_A 2 VGGGTVKKDLKKAIQYYVKACELNEMFGC--LSLVSNSQINKQKLFQYLSKACEL------------------------- 54 (138)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHTTCTTHH--HHHHTCTTSCHHHHHHHHHHHHHT-------------------------
T ss_pred CCCcCCccCHHHHHHHHHHHHcCCCHhhh--HHHHHHcCCCHHHHHHHHHHHHcC-------------------------
Confidence 46889999999999999999999999998 999999888888777666666555
Q ss_pred HHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHH
Q 019734 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 271 (336)
Q Consensus 192 ~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a 271 (336)
+++.++++||.+|..|.|+.+|+++|+.||++|++.+++.++++||.+|..|.|+++|+++|+.||++|++.|++.+
T Consensus 55 ---g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~A 131 (138)
T 1klx_A 55 ---NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSEDA 131 (138)
T ss_dssp ---TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHH
T ss_pred ---CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCCHHH
Confidence 55555566666677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 019734 272 QLEHGL 277 (336)
Q Consensus 272 ~~~lg~ 277 (336)
+++|+.
T Consensus 132 ~~~l~~ 137 (138)
T 1klx_A 132 CGILNN 137 (138)
T ss_dssp HHHC--
T ss_pred HHHHhh
Confidence 988875
No 10
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.90 E-value=1.3e-21 Score=179.58 Aligned_cols=255 Identities=15% Similarity=0.019 Sum_probs=124.4
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc------------
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR------------ 134 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~------------ 134 (336)
.....+......|++++|...+.+.++..|+ ++.+++.+|.++.. .+++++|+..|++++..
T Consensus 69 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 142 (388)
T 1w3b_A 69 AYSNLGNVYKERGQLQEAIEHYRHALRLKPD--FIDGYINLAAALVA----AGDMEGAVQAYVSALQYNPDLYCVRSDLG 142 (388)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----HSCSSHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHcCcc--hHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 3344444445556666666666666555444 45555555555554 34444444444444433
Q ss_pred ------------------------CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHH
Q 019734 135 ------------------------GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEA 184 (336)
Q Consensus 135 ------------------------~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A 184 (336)
+++.+++.+|.++...|++++|+.+|+++++. +++.+++.+|.++.. ++|
T Consensus 143 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A 222 (388)
T 1w3b_A 143 NLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRA 222 (388)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 23444444444444444444444444444322 344444444444444 445
Q ss_pred HHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHH
Q 019734 185 VKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260 (336)
Q Consensus 185 ~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~ 260 (336)
+..|+++++. +++.+++++|.+|.. .+++++|+.+|+++++. .++.++.++|.+|.. .+++++|+.+|
T Consensus 223 ~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~ 294 (388)
T 1w3b_A 223 VAAYLRALSLSPNHAVVHGNLACVYYE----QGLIDLAIDTYRRAIELQPHFPDAYCNLANALKE----KGSVAEAEDCY 294 (388)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHH----HSCHHHHHHHH
T ss_pred HHHHHHHHhhCcCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHH
Confidence 5555554432 344555555555554 45555555555555432 345555555555543 22555555555
Q ss_pred HHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcHHHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCCC
Q 019734 261 KRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSL 335 (336)
Q Consensus 261 ~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 335 (336)
++++.. .++.++.++|.++...|++++|+.+|+++++..+................++.++|....++..+..|.
T Consensus 295 ~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~ 371 (388)
T 1w3b_A 295 NTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 371 (388)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTT
T ss_pred HHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 555543 334455555555555555555555555555543322222222222223344555555555555555553
No 11
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.90 E-value=1.6e-21 Score=178.92 Aligned_cols=230 Identities=17% Similarity=0.086 Sum_probs=202.7
Q ss_pred HHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHH
Q 019734 70 NKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMY 147 (336)
Q Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~ 147 (336)
..+......|++++|...+.+.++..|+ ++.+++.+|.+|.. .+++++|+.+|++++.. .+..+++.+|.++
T Consensus 140 ~l~~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 213 (388)
T 1w3b_A 140 DLGNLLKALGRLEEAKACYLKAIETQPN--FAVAWSNLGCVFNA----QGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL 213 (388)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 3444455779999999999998888766 88999999999998 68999999999999987 5789999999999
Q ss_pred hcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHH
Q 019734 148 WEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQE 219 (336)
Q Consensus 148 ~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~ 219 (336)
...|++++|+..|++++.. +++.+++++|.++.. ++|+.+|+++++. .++.+++++|.+|.. .+++++
T Consensus 214 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~~~~ 289 (388)
T 1w3b_A 214 KEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKE----KGSVAE 289 (388)
T ss_dssp HTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHH----HSCHHH
T ss_pred HHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHH
Confidence 9999999999999999865 789999999999998 9999999999886 578999999999998 899999
Q ss_pred HHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHH
Q 019734 220 AARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELA 295 (336)
Q Consensus 220 A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A 295 (336)
|+.+|+++++ +.++.++..+|.++... +++++|+.+|+++++. ++..+++++|.+|...|++++|+.+|+++
T Consensus 290 A~~~~~~al~~~p~~~~~~~~l~~~~~~~----g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 365 (388)
T 1w3b_A 290 AEDCYNTALRLCPTHADSLNNLANIKREQ----GNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEA 365 (388)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHTT----TCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCcccHHHHHHHHHHHHHc----CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999976 46899999999999753 3999999999999885 56889999999999999999999999999
Q ss_pred HHcC--cHHHHHHHHHHHhh
Q 019734 296 TRAG--ETAADHVKNVILQQ 313 (336)
Q Consensus 296 ~~~~--~~~a~~~~~~~~~~ 313 (336)
++.. +..+...++.++..
T Consensus 366 ~~~~p~~~~a~~~lg~~~~~ 385 (388)
T 1w3b_A 366 IRISPTFADAYSNMGNTLKE 385 (388)
T ss_dssp HTTCTTCHHHHHHHHHHHHH
T ss_pred HhhCCCCHHHHHhHHHHHHH
Confidence 9865 56667677666544
No 12
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.90 E-value=1.6e-21 Score=173.81 Aligned_cols=257 Identities=12% Similarity=0.001 Sum_probs=219.1
Q ss_pred HHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDA 143 (336)
Q Consensus 66 ~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~l 143 (336)
...+..+..++..|++++|...+.+.++..|. +..+++.++.++.. .+++++|+.+|++++.. .++.+++.+
T Consensus 23 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~l 96 (330)
T 3hym_B 23 DVVVSLAERHYYNCDFKMCYKLTSVVMEKDPF--HASCLPVHIGTLVE----LNKANELFYLSHKLVDLYPSNPVSWFAV 96 (330)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CTTTHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTSTHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--ChhhHHHHHHHHHH----hhhHHHHHHHHHHHHHhCcCCHHHHHHH
Confidence 35577777788889999999999999998777 66777778888877 58999999999999986 478999999
Q ss_pred HHHHhcCC-CHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCc
Q 019734 144 GLMYWEMD-KKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVD 214 (336)
Q Consensus 144 g~~~~~~~-~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~ 214 (336)
|.++...| ++++|+.+|+++++. .++.+++.+|.++.. ++|+.+|+++++. +...+++.+|.+|.. .
T Consensus 97 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~ 172 (330)
T 3hym_B 97 GCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL----T 172 (330)
T ss_dssp HHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHH----T
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHH----H
Confidence 99999999 999999999999865 678999999999988 9999999999875 567899999999998 8
Q ss_pred cCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc-----------CCHHHHHHHHHHhhc
Q 019734 215 FNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC-----------GHGKAQLEHGLGLFT 281 (336)
Q Consensus 215 ~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~-----------~~~~a~~~lg~~~~~ 281 (336)
+++++|+.+|+++++. .++.+++.+|.+|... +++++|+.+|++++.. ..+.+++++|.++..
T Consensus 173 ~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~----~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 248 (330)
T 3hym_B 173 NNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQN----GEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK 248 (330)
T ss_dssp TCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHc----ccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH
Confidence 9999999999999764 6789999999999763 3999999999999873 336788999999999
Q ss_pred cCCHHHHHHHHHHHHHcCcHHHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCCCC
Q 019734 282 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 336 (336)
Q Consensus 282 ~~~~~~A~~~~~~A~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 336 (336)
.|++++|+.+|++++...+................++.++|....++..+..|.+
T Consensus 249 ~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 303 (330)
T 3hym_B 249 LKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDD 303 (330)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCC
T ss_pred hcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCc
Confidence 9999999999999998765443333333444445678899999999999888753
No 13
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.87 E-value=1.4e-19 Score=162.78 Aligned_cols=254 Identities=12% Similarity=-0.014 Sum_probs=138.7
Q ss_pred HHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHH
Q 019734 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLM 146 (336)
Q Consensus 69 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~ 146 (336)
+..+..++..|++++|...+.+.++..|. ++.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.+
T Consensus 7 ~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 7 LELGKKLLAAGQLADALSQFHAAVDGDPD--NYIAYYRRATVFLA----MGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCcc--cHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 44444444555555555555555554443 45555555555555 34555555555555543 244555555555
Q ss_pred HhcCCCHHHHHHHHHHHHHc---------------------------------------------------CCHHHHHHH
Q 019734 147 YWEMDKKEAAISLYRQAAVL---------------------------------------------------GDPAGQFNL 175 (336)
Q Consensus 147 ~~~~~~~~~A~~~~~~a~~~---------------------------------------------------~~~~a~~~L 175 (336)
+...|++++|+.+|+++++. +++.++..+
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 160 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELR 160 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 55555555555555555433 344444445
Q ss_pred HHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHH----------
Q 019734 176 GISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMY---------- 237 (336)
Q Consensus 176 g~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~---------- 237 (336)
|.++.. ++|+.+|+++++. .++.+++.+|.+|.. .+++++|+.+|+++++. .+..++.
T Consensus 161 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 236 (359)
T 3ieg_A 161 AECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQ----LGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNK 236 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHH
Confidence 555444 5555555555443 345555555555555 45555666665555432 3333322
Q ss_pred --HHHHHHHcCCCCcccHHHHHHHHHHHHHcC--CH----HHHHHHHHHhhccCCHHHHHHHHHHHHHcCcHHHHHHHHH
Q 019734 238 --NTSLCYSFGEGLPLSHRQARKWMKRAADCG--HG----KAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNV 309 (336)
Q Consensus 238 --~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~--~~----~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~a~~~~~~ 309 (336)
.+|.++... +++++|+.+|++++... ++ .++..+|.++...|++++|+.+|+++++..+.........
T Consensus 237 ~~~~a~~~~~~----~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 312 (359)
T 3ieg_A 237 LIESAEELIRD----GRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDR 312 (359)
T ss_dssp HHHHHHHHHHT----TCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHc----CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 224444432 26666666666666542 22 2345677788888888888888888877644333333333
Q ss_pred HHhhcChhcHHHHHHHHHHhhcCCCCC
Q 019734 310 ILQQLSATSRDRAMLVVDSWRAMPSLH 336 (336)
Q Consensus 310 ~~~~~~~~~~~~a~~~~~~~~~~~~~~ 336 (336)
.......++.++|....++..+..|.+
T Consensus 313 ~~~~~~~g~~~~A~~~~~~a~~~~p~~ 339 (359)
T 3ieg_A 313 AEAYLIEEMYDEAIQDYEAAQEHNEND 339 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 333344567777888888887777753
No 14
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.87 E-value=4.2e-20 Score=156.52 Aligned_cols=186 Identities=15% Similarity=0.018 Sum_probs=149.3
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
++.+++.+|.++.. .+++++|+..|++++.. +++.+++.+|.++...|++++|+..|+++++. +++.+++++
T Consensus 4 ~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~l 79 (217)
T 2pl2_A 4 AEQNPLRLGVQLYA----LGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVL 79 (217)
T ss_dssp CCHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 67899999999998 68999999999999987 58999999999999999999999999999854 789999999
Q ss_pred HHHHH-------------H--HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC-CCHHHHH
Q 019734 176 GISYL-------------Q--EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG-GYVRAMY 237 (336)
Q Consensus 176 g~~~~-------------~--~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~-~~~~a~~ 237 (336)
|.++. . ++|+..|+++++. +++.+++++|.+|.. .+++++|+.+|+++++. +++.+++
T Consensus 80 g~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~ 155 (217)
T 2pl2_A 80 SEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYAL----LGERDKAEASLKQALALEDTPEIRS 155 (217)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH----cCChHHHHHHHHHHHhcccchHHHH
Confidence 99985 3 7899999999774 688999999999988 78999999999998544 6788899
Q ss_pred HHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 238 NTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 238 ~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
++|.+|... +++++|+.+|+++++. +++.+++++|.++...|++++|+.+|+++-.
T Consensus 156 ~la~~~~~~----g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 213 (217)
T 2pl2_A 156 ALAELYLSM----GRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARAAALEHH 213 (217)
T ss_dssp HHHHHHHHH----TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC----------------
T ss_pred HHHHHHHHc----CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 999998653 3899999999999874 6788889999999999999999999887643
No 15
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.87 E-value=1.4e-20 Score=171.18 Aligned_cols=219 Identities=13% Similarity=0.030 Sum_probs=188.4
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
..+..+..++..|++++|+..+.+.++..|+ ++.+++.+|.+|.. .+++++|+.+|++++.. .++.+++.+|
T Consensus 67 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 140 (365)
T 4eqf_A 67 GAFEEGLKRLKEGDLPVTILFMEAAILQDPG--DAEAWQFLGITQAE----NENEQAAIVALQRCLELQPNNLKALMALA 140 (365)
T ss_dssp THHHHHHHHHHHTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC--CHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4677788888999999999999999998877 89999999999999 68999999999999987 5799999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHcC--CHHHH----------HHHHHHHHH----HHHHHHHHHHHHc--C--CHHHHHHHH
Q 019734 145 LMYWEMDKKEAAISLYRQAAVLG--DPAGQ----------FNLGISYLQ----EEAVKLLYQASIA--G--HVRAQYQLA 204 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~~~--~~~a~----------~~Lg~~~~~----~~A~~~~~ka~~~--~--~~~a~~~lg 204 (336)
.+|...|++++|+.+|+++++.. ++.++ ..+|.++.. ++|+.+|+++++. . ++.+++++|
T Consensus 141 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~ 220 (365)
T 4eqf_A 141 VSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLG 220 (365)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHH
T ss_pred HHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHH
Confidence 99999999999999999998652 22233 345777776 9999999999875 3 789999999
Q ss_pred HHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhh
Q 019734 205 LCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLF 280 (336)
Q Consensus 205 ~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~ 280 (336)
.+|.. .+++++|+.+|+++++ +.++.+++++|.+|... +++++|+.+|++++.. +++.+++++|.+|.
T Consensus 221 ~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~----g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 292 (365)
T 4eqf_A 221 VLFHL----SGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANG----DRSEEAVEAYTRALEIQPGFIRSRYNLGISCI 292 (365)
T ss_dssp HHHHH----HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHH----CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 99998 8999999999999976 46899999999999763 3999999999999985 56889999999999
Q ss_pred ccCCHHHHHHHHHHHHHcC
Q 019734 281 TEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 281 ~~~~~~~A~~~~~~A~~~~ 299 (336)
..|++++|+.+|+++++..
T Consensus 293 ~~g~~~~A~~~~~~al~~~ 311 (365)
T 4eqf_A 293 NLGAYREAVSNFLTALSLQ 311 (365)
T ss_dssp HHTCCHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhC
Confidence 9999999999999999753
No 16
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.86 E-value=9.4e-20 Score=162.32 Aligned_cols=229 Identities=15% Similarity=0.110 Sum_probs=202.1
Q ss_pred HHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcC-CHHHHHHHHHHHHHc--CCHHHHHHHHHH
Q 019734 70 NKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRK-NLDKALDSFLKGAAR--GSTLAMVDAGLM 146 (336)
Q Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~-~~~~A~~~~~~A~~~--~~~~a~~~lg~~ 146 (336)
..+..++..|++++|...+.+.++..+. ++.+++.+|.++.. .+ ++++|+.+|++++.. .++.+++.+|.+
T Consensus 61 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~~~~----~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 134 (330)
T 3hym_B 61 VHIGTLVELNKANELFYLSHKLVDLYPS--NPVSWFAVGCYYLM----VGHKNEHARRYLSKATTLEKTYGPAWIAYGHS 134 (330)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTT--STHHHHHHHHHHHH----SCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCcC--CHHHHHHHHHHHHH----hhhhHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 3444556779999999999999998776 78999999999998 57 999999999999987 478999999999
Q ss_pred HhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHH
Q 019734 147 YWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQ 218 (336)
Q Consensus 147 ~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~ 218 (336)
+...|++++|+..|+++++. ++..+++.+|.++.. ++|+.+|+++++. .++.+++.+|.+|.. .++++
T Consensus 135 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~----~~~~~ 210 (330)
T 3hym_B 135 FAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQ----NGEWK 210 (330)
T ss_dssp HHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH----TTCHH
T ss_pred HHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----cccHH
Confidence 99999999999999999875 678899999999998 9999999999875 588999999999998 89999
Q ss_pred HHHHHHHHHHH-----------CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCH
Q 019734 219 EAARWYLRAAE-----------GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEM 285 (336)
Q Consensus 219 ~A~~~~~~a~~-----------~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~ 285 (336)
+|+.+|+++++ .....+++.+|.+|... +++++|+.+|++++.. .++.+++++|.++...|++
T Consensus 211 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~----g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~ 286 (330)
T 3hym_B 211 TAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKL----KKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNF 286 (330)
T ss_dssp HHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccH
Confidence 99999999976 45578999999999763 3999999999999985 5688999999999999999
Q ss_pred HHHHHHHHHHHHcC--cHHHHHHHHHHHh
Q 019734 286 MKAVVYLELATRAG--ETAADHVKNVILQ 312 (336)
Q Consensus 286 ~~A~~~~~~A~~~~--~~~a~~~~~~~~~ 312 (336)
++|..+|+++++.. ++.+...++.++.
T Consensus 287 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 315 (330)
T 3hym_B 287 ENAVDYFHTALGLRRDDTFSVTMLGHCIE 315 (330)
T ss_dssp HHHHHHHHTTTTTCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCchHHHHHHHHHHH
Confidence 99999999999864 5677777776654
No 17
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.85 E-value=4.2e-19 Score=165.50 Aligned_cols=185 Identities=15% Similarity=0.068 Sum_probs=116.9
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
..+..+..++..|++.+|+..+.+.++..|. ++.+++.+|.+|.. .+++++|+.+|+++++. .++.+++.+|
T Consensus 28 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 101 (450)
T 2y4t_A 28 KHLELGKKLLAAGQLADALSQFHAAVDGDPD--NYIAYYRRATVFLA----MGKSKAALPDLTKVIQLKMDFTAARLQRG 101 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc--cHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 3456666667778888888777777776555 67788888888877 47888888888887775 4677778888
Q ss_pred HHHhcCCCHHHHHHHHHHHHHc--CCH---HHHHHH------------HHHHHH----HHHHHHHHHHHHc--CCHHHHH
Q 019734 145 LMYWEMDKKEAAISLYRQAAVL--GDP---AGQFNL------------GISYLQ----EEAVKLLYQASIA--GHVRAQY 201 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~~--~~~---~a~~~L------------g~~~~~----~~A~~~~~ka~~~--~~~~a~~ 201 (336)
.+|...|++++|+.+|+++++. .++ .++..+ |.++.. ++|+.+|+++++. .++.+++
T Consensus 102 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 181 (450)
T 2y4t_A 102 HLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRE 181 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 8888888888888888877754 333 444444 333433 6666666666543 3555555
Q ss_pred HHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHH
Q 019734 202 QLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265 (336)
Q Consensus 202 ~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~ 265 (336)
.+|.+|.. .+++++|+.+|++++. +.++.+++.+|.+|... +++++|+.+|++++.
T Consensus 182 ~l~~~~~~----~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~----g~~~~A~~~~~~~~~ 239 (450)
T 2y4t_A 182 LRAECFIK----EGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQL----GDHELSLSEVRECLK 239 (450)
T ss_dssp HHHHHHHH----TTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHH----CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHH
Confidence 56655555 4555555555555532 34555555555555432 155555555555544
No 18
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.85 E-value=1.2e-19 Score=164.61 Aligned_cols=236 Identities=12% Similarity=0.024 Sum_probs=201.2
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
..+..+..++..|++.+|...+.+.++..|. ++.+++.+|.+|.. .+++++|+.+|++++.. .++.+++.+|
T Consensus 66 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~l~ 139 (368)
T 1fch_A 66 QPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK--HMEAWQYLGTTQAE----NEQELLAISALRRCLELKPDNQTALMALA 139 (368)
T ss_dssp SHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH----CcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 3567777788999999999999999988766 89999999999999 68999999999999987 5899999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHc--CCHHHHH----------------HHHHHHHH---HHHHHHHHHHHHc--C--CHHH
Q 019734 145 LMYWEMDKKEAAISLYRQAAVL--GDPAGQF----------------NLGISYLQ---EEAVKLLYQASIA--G--HVRA 199 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~----------------~Lg~~~~~---~~A~~~~~ka~~~--~--~~~a 199 (336)
.+|...|++++|+.+|+++++. .+...+. .+|.++.. ++|+.+|+++++. . ++.+
T Consensus 140 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 219 (368)
T 1fch_A 140 VSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDV 219 (368)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHH
Confidence 9999999999999999999875 3333332 46666633 9999999999875 3 6889
Q ss_pred HHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEH 275 (336)
Q Consensus 200 ~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~l 275 (336)
++.+|.+|.. .+++++|+.+|++++. +.++.+++.+|.+|... +++++|+.+|++++.. +++.+++++
T Consensus 220 ~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~----g~~~~A~~~~~~al~~~~~~~~~~~~l 291 (368)
T 1fch_A 220 QCGLGVLFNL----SGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANG----NQSEEAVAAYRRALELQPGYIRSRYNL 291 (368)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 9999999998 8999999999999975 46789999999999763 3999999999999885 568899999
Q ss_pred HHHhhccCCHHHHHHHHHHHHHcC--c-----------HHHHHHHHHHHhhcCh
Q 019734 276 GLGLFTEGEMMKAVVYLELATRAG--E-----------TAADHVKNVILQQLSA 316 (336)
Q Consensus 276 g~~~~~~~~~~~A~~~~~~A~~~~--~-----------~~a~~~~~~~~~~~~~ 316 (336)
|.+|...|++++|..+|++++... + ..+...++.++..+..
T Consensus 292 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 345 (368)
T 1fch_A 292 GISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQ 345 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCC
Confidence 999999999999999999998753 3 5566666666665533
No 19
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.85 E-value=4.6e-19 Score=165.24 Aligned_cols=256 Identities=11% Similarity=-0.025 Sum_probs=214.2
Q ss_pred hHHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC--CH---HH
Q 019734 65 PFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG--ST---LA 139 (336)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~--~~---~a 139 (336)
+......+..++..|++++|...+.+.++..++ ++.+++.+|.+|.. .+++++|+.+|++++... +. .+
T Consensus 60 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~~~~~~~~~~~ 133 (450)
T 2y4t_A 60 YIAYYRRATVFLAMGKSKAALPDLTKVIQLKMD--FTAARLQRGHLLLK----QGKLDEAEDDFKKVLKSNPSENEEKEA 133 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC--cHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCChhhHHH
Confidence 445566777778899999999999999998777 79999999999999 689999999999999874 34 55
Q ss_pred HHHH------------HHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHH
Q 019734 140 MVDA------------GLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRA 199 (336)
Q Consensus 140 ~~~l------------g~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a 199 (336)
+..+ |.++...|++++|+.+|+++++. .++.+++.+|.+|.. ++|+.+|+++++. .++.+
T Consensus 134 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 213 (450)
T 2y4t_A 134 QSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEA 213 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHH
Confidence 5444 77799999999999999999865 689999999999998 9999999999764 78999
Q ss_pred HHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHH------------HHHHHcCCCCcccHHHHHHHHHHHHH
Q 019734 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNT------------SLCYSFGEGLPLSHRQARKWMKRAAD 265 (336)
Q Consensus 200 ~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~l------------g~~~~~~~g~~~~~~~A~~~~~~a~~ 265 (336)
++.+|.+|.. .+++++|+.+|++++.. .+...+..+ |.++.. .+++++|+.+|++++.
T Consensus 214 ~~~l~~~~~~----~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~~l~ 285 (450)
T 2y4t_A 214 FYKISTLYYQ----LGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIR----DGRYTDATSKYESVMK 285 (450)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHh
Confidence 9999999998 89999999999999654 566666555 788865 3399999999999988
Q ss_pred cC--C----HHHHHHHHHHhhccCCHHHHHHHHHHHHHcCc--HHHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCCCC
Q 019734 266 CG--H----GKAQLEHGLGLFTEGEMMKAVVYLELATRAGE--TAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 336 (336)
Q Consensus 266 ~~--~----~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~--~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 336 (336)
.. + ...+..+|.++...|++++|+.+|++++...+ ..+...++.++ ...++.++|...+++..+..|.+
T Consensus 286 ~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~--~~~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 286 TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAY--LIEEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH--HHTTCHHHHHHHHHHHHTTSSSC
T ss_pred cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH--HHhcCHHHHHHHHHHHHHhCcch
Confidence 53 3 23678999999999999999999999998754 45555555444 45678899999999999888864
No 20
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.85 E-value=1.3e-19 Score=161.23 Aligned_cols=248 Identities=13% Similarity=-0.003 Sum_probs=203.5
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
..+..+...+..|++++|...+.+.++..+. ++.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~la 96 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQAAPE--REEAWRSLGLTQAE----NEKDGLAIIALNHARMLDPKDIAVHAALA 96 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCcCCHHHHHHHH
Confidence 3567777788999999999999999998776 89999999999998 58999999999999987 4789999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH--------------HH-HHHH----HHHHHHHHHHHHc--CCHHHHH
Q 019734 145 LMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL--------------GI-SYLQ----EEAVKLLYQASIA--GHVRAQY 201 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L--------------g~-~~~~----~~A~~~~~ka~~~--~~~~a~~ 201 (336)
.++...|++++|+.+|+++++. .+...+..+ |. ++.. ++|+.+|+++++. .++.+++
T Consensus 97 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 176 (327)
T 3cv0_A 97 VSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHA 176 (327)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHH
Confidence 9999999999999999999865 344444444 44 3333 9999999999875 5789999
Q ss_pred HHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHH
Q 019734 202 QLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGL 277 (336)
Q Consensus 202 ~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~ 277 (336)
.+|.+|.. .+++++|+.+|+++++ +.+..++..+|.+|... +++++|+.+|++++.. .+..+++.+|.
T Consensus 177 ~la~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 248 (327)
T 3cv0_A 177 SLGVLYNL----SNNYDSAAANLRRAVELRPDDAQLWNKLGATLANG----NRPQEALDAYNRALDINPGYVRVMYNMAV 248 (327)
T ss_dssp HHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHH----hccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 99999998 8999999999999975 46789999999999763 3999999999999885 56888999999
Q ss_pred HhhccCCHHHHHHHHHHHHHcCc--------------HHHHHHHHHHHhhcChhcHHHHHHHHHHhh
Q 019734 278 GLFTEGEMMKAVVYLELATRAGE--------------TAADHVKNVILQQLSATSRDRAMLVVDSWR 330 (336)
Q Consensus 278 ~~~~~~~~~~A~~~~~~A~~~~~--------------~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~ 330 (336)
+|...|++++|..+|++++...+ ..+...++.++. ..++.++|....++.+
T Consensus 249 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~g~~~~A~~~~~~~l 313 (327)
T 3cv0_A 249 SYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLN--VMNRPDLVELTYAQNV 313 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHH--HTTCHHHHHHHTTCCS
T ss_pred HHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHH--hcCCHHHHHHHHHHHH
Confidence 99999999999999999998643 344444555444 4456677766655443
No 21
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.85 E-value=6.3e-20 Score=159.51 Aligned_cols=234 Identities=10% Similarity=0.002 Sum_probs=197.0
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC-----CHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG-----STLAMV 141 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~-----~~~a~~ 141 (336)
..+..+...+..|++++|+..+.+.++..|. ++.+++.+|.+|.. .+++++|+.+|++++... ...+++
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~--~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 78 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAKKYN--SPYIYNRRAVCYYE----LAKYDLAQKDIETYFSKVNATKAKSADFE 78 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCC--CSTTHHHHHHHHHH----TTCHHHHHHHHHHHHTTSCTTTCCHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHH----HhhHHHHHHHHHHHHhccCchhHHHHHHH
Confidence 4567788888999999999999999998776 67789999999998 689999999999999852 256689
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHH-HHHhcCCC
Q 019734 142 DAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLA-LCLHRGRG 212 (336)
Q Consensus 142 ~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg-~~~~~g~g 212 (336)
.+|.++...|++++|+.+|+++++. .++.++..+|.+|.. ++|+.+|+++++. .++.+++++| .+|..
T Consensus 79 ~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~--- 155 (272)
T 3u4t_A 79 YYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYN--- 155 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHT---
T ss_pred HHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHH---
Confidence 9999999999999999999999865 788999999999999 9999999999864 6899999999 88876
Q ss_pred CccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc----CC------HHHHHHHHHHhh
Q 019734 213 VDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC----GH------GKAQLEHGLGLF 280 (336)
Q Consensus 213 ~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~----~~------~~a~~~lg~~~~ 280 (336)
+++++|+.+|+++++ +.+..+++.+|.++... |...++++|+.+|+++++. .+ ..++..+|.+|.
T Consensus 156 --~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~ 232 (272)
T 3u4t_A 156 --KEYVKADSSFVKVLELKPNIYIGYLWRARANAAQ-DPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYT 232 (272)
T ss_dssp --TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH-STTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc-CcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 499999999999976 46789999999999653 2123388899999999874 22 257889999999
Q ss_pred ccCCHHHHHHHHHHHHHcC--cHHHHHHHHHHHh
Q 019734 281 TEGEMMKAVVYLELATRAG--ETAADHVKNVILQ 312 (336)
Q Consensus 281 ~~~~~~~A~~~~~~A~~~~--~~~a~~~~~~~~~ 312 (336)
..|++++|+.+|+++++.. ++.+...+..+..
T Consensus 233 ~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~ 266 (272)
T 3u4t_A 233 INRDKVKADAAWKNILALDPTNKKAIDGLKMKLE 266 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHC----
T ss_pred HcCCHHHHHHHHHHHHhcCccHHHHHHHhhhhhc
Confidence 9999999999999999864 5566655554433
No 22
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.84 E-value=1.9e-19 Score=165.46 Aligned_cols=224 Identities=6% Similarity=-0.078 Sum_probs=151.1
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHc--CCHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDK-KEAAISLYRQAAVL--GDPAGQFN 174 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~-~~~A~~~~~~a~~~--~~~~a~~~ 174 (336)
++.+++.+|.++.. .+++++|+..|++++.. ++..+++.+|.++...|+ +++|+.+|++++.. +++.++++
T Consensus 96 ~~~a~~~lg~~~~~----~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~ 171 (382)
T 2h6f_A 96 FRDVYDYFRAVLQR----DERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHH 171 (382)
T ss_dssp HHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hHHHHHHHHHHHHH----CCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 45667777777766 46777777777777766 467777777777777775 77777777777654 57777777
Q ss_pred HHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcC
Q 019734 175 LGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFG 246 (336)
Q Consensus 175 Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~ 246 (336)
+|.++.. ++|+.+|+++++. ++..+++++|.++.. .+++++|+.+|+++++ +.+..+++++|.+|...
T Consensus 172 ~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~----~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l 247 (382)
T 2h6f_A 172 RRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE----FKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNT 247 (382)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 7777776 7777777777664 467777777777776 6677777777777754 45677777777777653
Q ss_pred CCCcccHHHH-----HHHHHHHHHc--CCHHHHHHHHHHhhccC--CHHHHHHHHHHHHHc--CcHHHHHHHHHHHhhcC
Q 019734 247 EGLPLSHRQA-----RKWMKRAADC--GHGKAQLEHGLGLFTEG--EMMKAVVYLELATRA--GETAADHVKNVILQQLS 315 (336)
Q Consensus 247 ~g~~~~~~~A-----~~~~~~a~~~--~~~~a~~~lg~~~~~~~--~~~~A~~~~~~A~~~--~~~~a~~~~~~~~~~~~ 315 (336)
.| ..++| +.+|++++.. ++..+++++|.++...| ++++|+..++++ +. +++.+...++.++..+.
T Consensus 248 ~~---~~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~-~~~p~~~~al~~La~~~~~~~ 323 (382)
T 2h6f_A 248 TG---YNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDL-QPSHSSPYLIAFLVDIYEDML 323 (382)
T ss_dssp TC---SCSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-TTTCCCHHHHHHHHHHHHHHH
T ss_pred cC---cchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHccCccchHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHh
Confidence 32 22344 5777777664 55677777777777766 577777777766 33 34455555655555442
Q ss_pred -------hhcHHHHHHHHHHh-hcCCCC
Q 019734 316 -------ATSRDRAMLVVDSW-RAMPSL 335 (336)
Q Consensus 316 -------~~~~~~a~~~~~~~-~~~~~~ 335 (336)
....++|+.+++++ .+..|.
T Consensus 324 ~~~~~~~~~~~~~A~~~~~~l~~~~DP~ 351 (382)
T 2h6f_A 324 ENQCDNKEDILNKALELCEILAKEKDTI 351 (382)
T ss_dssp HTTCSSHHHHHHHHHHHHHHHHHTTCGG
T ss_pred cccccchHHHHHHHHHHHHHHHHHhCch
Confidence 11246777777777 565553
No 23
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.84 E-value=8.2e-19 Score=169.56 Aligned_cols=258 Identities=10% Similarity=-0.022 Sum_probs=217.4
Q ss_pred hHHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHH
Q 019734 65 PFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVD 142 (336)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~ 142 (336)
+......+..++..|++++|..++.+..+..++ +..++..++.++.. .+++++|+..|++++.. .++.+++.
T Consensus 305 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~~~~~~~~~~~ 378 (597)
T 2xpi_A 305 SDLLLCKADTLFVRSRFIDVLAITTKILEIDPY--NLDVYPLHLASLHE----SGEKNKLYLISNDLVDRHPEKAVTWLA 378 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CCTTHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTSHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcc--cHHHHHHHHHHHHH----hCCHHHHHHHHHHHHhhCcccHHHHHH
Confidence 344566666777889999999999998888766 67778888988887 68999999999998875 57899999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCc
Q 019734 143 AGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVD 214 (336)
Q Consensus 143 lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~ 214 (336)
+|.+|...|++++|+.+|+++++. .++.+++.+|.+|.. ++|+.+|+++++. ++..++..+|.+|.. .
T Consensus 379 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~ 454 (597)
T 2xpi_A 379 VGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ----L 454 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH----H
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH----c
Confidence 999999999999999999999764 689999999999988 9999999999876 478899999999998 8
Q ss_pred cCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc------CC---HHHHHHHHHHhhccC
Q 019734 215 FNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC------GH---GKAQLEHGLGLFTEG 283 (336)
Q Consensus 215 ~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~------~~---~~a~~~lg~~~~~~~ 283 (336)
+++++|+.+|+++++ +.++.++..+|.+|... +++++|+.+|+++++. .+ ..++..+|.+|...|
T Consensus 455 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~----g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g 530 (597)
T 2xpi_A 455 GNILLANEYLQSSYALFQYDPLLLNELGVVAFNK----SDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLK 530 (597)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHh----CCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhc
Confidence 999999999999965 46899999999999763 3999999999999875 22 567899999999999
Q ss_pred CHHHHHHHHHHHHHcCcHHHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCCCC
Q 019734 284 EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 336 (336)
Q Consensus 284 ~~~~A~~~~~~A~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 336 (336)
++++|..+|+++++.++.+...+..........++.++|...+++..+..|.+
T Consensus 531 ~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~ 583 (597)
T 2xpi_A 531 MYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNE 583 (597)
T ss_dssp CHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Confidence 99999999999998765444443444444445678899999999998888763
No 24
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.84 E-value=8.5e-20 Score=143.57 Aligned_cols=122 Identities=19% Similarity=0.140 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHH
Q 019734 182 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261 (336)
Q Consensus 182 ~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~ 261 (336)
++|+.+|+++++.+++.++ ||.+|..|. ..++|+.||+++++.+++.++++||.+|..|.|+++|+++|+.||+
T Consensus 12 ~~A~~~~~~aa~~g~~~a~--lg~~y~~g~----~~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~ 85 (138)
T 1klx_A 12 KKAIQYYVKACELNEMFGC--LSLVSNSQI----NKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYS 85 (138)
T ss_dssp HHHHHHHHHHHHTTCTTHH--HHHHTCTTS----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHhhh--HHHHHHcCC----CHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHH
Confidence 6889999999999999888 999999864 4566999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHhhc----cCCHHHHHHHHHHHHHcCcHHHHHHHHH
Q 019734 262 RAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGETAADHVKNV 309 (336)
Q Consensus 262 ~a~~~~~~~a~~~lg~~~~~----~~~~~~A~~~~~~A~~~~~~~a~~~~~~ 309 (336)
+|++.+++.++++||.+|.. .+|+++|+.||++|++.|++.++..++.
T Consensus 86 ~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~A~~~l~~ 137 (138)
T 1klx_A 86 KACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSEDACGILNN 137 (138)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHC--
T ss_pred HHHcCCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHhh
Confidence 99999999999999999999 8999999999999999999999987754
No 25
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.84 E-value=3.5e-19 Score=163.61 Aligned_cols=228 Identities=6% Similarity=-0.149 Sum_probs=192.9
Q ss_pred HHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCC-HHHHHHHHHHHHHc--CCHHHHHHHHH
Q 019734 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKN-LDKALDSFLKGAAR--GSTLAMVDAGL 145 (336)
Q Consensus 69 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~-~~~A~~~~~~A~~~--~~~~a~~~lg~ 145 (336)
...+..+...|++++|+..+.+.++..|+ ++.+++.+|.++.. .++ +++|+.+|++++.. .+..+++++|.
T Consensus 101 ~~lg~~~~~~g~~~~Al~~~~~al~l~P~--~~~a~~~~g~~l~~----~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~ 174 (382)
T 2h6f_A 101 DYFRAVLQRDERSERAFKLTRDAIELNAA--NYTVWHFRRVLLKS----LQKDLHEEMNYITAIIEEQPKNYQVWHHRRV 174 (382)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHCCChHHHHHHHHHHHHhCcc--CHHHHHHHHHHHHH----cccCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 44455556789999999999999999887 89999999999998 465 99999999999987 58999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCH
Q 019734 146 MYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNL 217 (336)
Q Consensus 146 ~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~ 217 (336)
++...|++++|+..|+++++. +++.+++++|.++.. ++|+.+|+++++. ++..+++++|.+|..-. +..
T Consensus 175 ~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~---~~~ 251 (382)
T 2h6f_A 175 LVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTT---GYN 251 (382)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT---CSC
T ss_pred HHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc---Ccc
Confidence 999999999999999999865 799999999999998 9999999999876 68999999999998711 222
Q ss_pred HHH-----HHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccC-----
Q 019734 218 QEA-----ARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEG----- 283 (336)
Q Consensus 218 ~~A-----~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~----- 283 (336)
++| +.+|++++. +++..+++++|.++.. .| ..++++|+..++++ +. +++.++..||.+|...|
T Consensus 252 ~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~-~g-~~~~~~a~~~~~~~-~~~p~~~~al~~La~~~~~~~~~~~~ 328 (382)
T 2h6f_A 252 DRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQD-RG-LSKYPNLLNQLLDL-QPSHSSPYLIAFLVDIYEDMLENQCD 328 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTT-TC-GGGCHHHHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred hHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHc-cC-ccchHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHhccccc
Confidence 555 699999965 5789999999999965 33 23689999999887 43 56788999999998874
Q ss_pred ---C-HHHHHHHHHHH-HHcCcHHHHHHHH
Q 019734 284 ---E-MMKAVVYLELA-TRAGETAADHVKN 308 (336)
Q Consensus 284 ---~-~~~A~~~~~~A-~~~~~~~a~~~~~ 308 (336)
+ +++|+.+|+++ ++.++....++..
T Consensus 329 ~~~~~~~~A~~~~~~l~~~~DP~r~~~w~~ 358 (382)
T 2h6f_A 329 NKEDILNKALELCEILAKEKDTIRKEYWRY 358 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhCchhHHHHHH
Confidence 3 59999999999 8887665555443
No 26
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.83 E-value=2e-19 Score=163.42 Aligned_cols=221 Identities=13% Similarity=0.021 Sum_probs=180.5
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
++..++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.+|...|++++|+.+|+++++. +++.+++.+
T Consensus 64 ~~~~~~~~~~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 139 (365)
T 4eqf_A 64 DWPGAFEEGLKRLK----EGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMAL 139 (365)
T ss_dssp TCTTHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chhHHHHHHHHHHH----CCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 45669999999999 68999999999999986 58999999999999999999999999999865 789999999
Q ss_pred HHHHHH----HHHHHHHHHHHHcC--CH----------HHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--C--CHHH
Q 019734 176 GISYLQ----EEAVKLLYQASIAG--HV----------RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--G--YVRA 235 (336)
Q Consensus 176 g~~~~~----~~A~~~~~ka~~~~--~~----------~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~--~~~a 235 (336)
|.+|.. ++|+.+|+++++.. +. ..+..+|.++.. .+++++|+.+|++++.. . ++.+
T Consensus 140 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~ 215 (365)
T 4eqf_A 140 AVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVD----SSVLEGVKELYLEAAHQNGDMIDPDL 215 (365)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------C----CHHHHHHHHHHHHHHHHSCSSCCHHH
T ss_pred HHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhh----hhhHHHHHHHHHHHHHhCcCccCHHH
Confidence 999998 99999999998753 22 233455888887 89999999999999764 4 7899
Q ss_pred HHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCc--HHHHHHHHHHH
Q 019734 236 MYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGE--TAADHVKNVIL 311 (336)
Q Consensus 236 ~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~--~~a~~~~~~~~ 311 (336)
++++|.+|.. .+++++|+.+|++++.. .++.+++++|.+|...|++++|+.+|+++++..+ ..+...++.+
T Consensus 216 ~~~l~~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~- 290 (365)
T 4eqf_A 216 QTGLGVLFHL----SGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS- 290 (365)
T ss_dssp HHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-
T ss_pred HHHHHHHHHH----CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH-
Confidence 9999999976 34999999999999985 6688999999999999999999999999998754 4455555544
Q ss_pred hhcChhcHHHHHHHHHHhhcCCC
Q 019734 312 QQLSATSRDRAMLVVDSWRAMPS 334 (336)
Q Consensus 312 ~~~~~~~~~~a~~~~~~~~~~~~ 334 (336)
....++.++|....++.++..|
T Consensus 291 -~~~~g~~~~A~~~~~~al~~~~ 312 (365)
T 4eqf_A 291 -CINLGAYREAVSNFLTALSLQR 312 (365)
T ss_dssp -HHHHTCCHHHHHHHHHHHHHHH
T ss_pred -HHHCCCHHHHHHHHHHHHHhCc
Confidence 4445677888888887776554
No 27
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.2e-18 Score=164.89 Aligned_cols=252 Identities=10% Similarity=-0.012 Sum_probs=175.7
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
..+..+..++..|++.+|+..+.+.++..| ++.+++.+|.+|.. .+++++|+.+|++++.. +++.+++.+|
T Consensus 8 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 80 (514)
T 2gw1_A 8 ALKDKGNQFFRNKKYDDAIKYYNWALELKE---DPVFYSNLSACYVS----VGDLKKVVEMSTKALELKPDYSKVLLRRA 80 (514)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCc---cHHHHHhHHHHHHH----HhhHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 456677777788888888888888887753 57888888888887 57888888888888876 4778888888
Q ss_pred HHHhcCCCHHHHHHHHHHHHHcCC--------------------------------------------------------
Q 019734 145 LMYWEMDKKEAAISLYRQAAVLGD-------------------------------------------------------- 168 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~~~~-------------------------------------------------------- 168 (336)
.+|...|++++|+..|++++..+.
T Consensus 81 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (514)
T 2gw1_A 81 SANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQENLPS 160 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC---------------------------CCCC
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhhccCCch
Confidence 888888888888888888765432
Q ss_pred -------------------------HHHHHHHHHHHHH-------HHHHHHHHHHHH----------------cCCHHHH
Q 019734 169 -------------------------PAGQFNLGISYLQ-------EEAVKLLYQASI----------------AGHVRAQ 200 (336)
Q Consensus 169 -------------------------~~a~~~Lg~~~~~-------~~A~~~~~ka~~----------------~~~~~a~ 200 (336)
+.+++.+|.++.. ++|+.+|+++++ ..++.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (514)
T 2gw1_A 161 VTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISL 240 (514)
T ss_dssp HHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHH
T ss_pred hHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHH
Confidence 5566666666542 777888877776 2345677
Q ss_pred HHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 201 YQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHG 276 (336)
Q Consensus 201 ~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg 276 (336)
+.+|.++.. .+++++|+.+|+++++. . ..+++.+|.+|.... ++++|+.+|++++.. .++.+++.+|
T Consensus 241 ~~~~~~~~~----~~~~~~A~~~~~~~l~~~~~-~~~~~~l~~~~~~~~----~~~~A~~~~~~~~~~~~~~~~~~~~l~ 311 (514)
T 2gw1_A 241 EHTGIFKFL----KNDPLGAHEDIKKAIELFPR-VNSYIYMALIMADRN----DSTEYYNYFDKALKLDSNNSSVYYHRG 311 (514)
T ss_dssp HHHHHHHHH----SSCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHTSS----CCTTGGGHHHHHHTTCTTCTHHHHHHH
T ss_pred HHHHHHHHH----CCCHHHHHHHHHHHHhhCcc-HHHHHHHHHHHHHCC----CHHHHHHHHHHHhhcCcCCHHHHHHHH
Confidence 778877777 67788888888777543 3 667777777775422 667777777777654 3456666777
Q ss_pred HHhhccCCHHHHHHHHHHHHHcCcHHHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCC
Q 019734 277 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334 (336)
Q Consensus 277 ~~~~~~~~~~~A~~~~~~A~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 334 (336)
.++...|++++|+.+|++++...+................++.++|....++..+..|
T Consensus 312 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 369 (514)
T 2gw1_A 312 QMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFP 369 (514)
T ss_dssp HHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcc
Confidence 7777777777777777777665543333333344444555666666666666655444
No 28
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.83 E-value=9.2e-19 Score=148.24 Aligned_cols=187 Identities=14% Similarity=0.071 Sum_probs=152.4
Q ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHH
Q 019734 135 GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALC 206 (336)
Q Consensus 135 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~ 206 (336)
.++.+++.+|.++...|++++|+..|+++++. +++.+++++|.++.. ++|+.+|+++++. +++.+++++|.+
T Consensus 3 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~ 82 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEA 82 (217)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 46788999999999999999999999999865 799999999999998 9999999999875 689999999999
Q ss_pred HhcCCCCc-----------cCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc-CCHHHH
Q 019734 207 LHRGRGVD-----------FNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC-GHGKAQ 272 (336)
Q Consensus 207 ~~~g~g~~-----------~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~-~~~~a~ 272 (336)
+.. . +++++|+..|+++++ ++++.+++++|.+|... +++++|+.+|+++++. +++.++
T Consensus 83 ~~~----~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~----g~~~~A~~~~~~al~~~~~~~~~ 154 (217)
T 2pl2_A 83 YVA----LYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALL----GERDKAEASLKQALALEDTPEIR 154 (217)
T ss_dssp HHH----HHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHH----hhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc----CChHHHHHHHHHHHhcccchHHH
Confidence 998 7 899999999999965 57899999999999763 3999999999999876 678889
Q ss_pred HHHHHHhhccCCHHHHHHHHHHHHHcCcHHHHHHHHHHHhhcChhcHHHHHHHHHHh
Q 019734 273 LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 329 (336)
Q Consensus 273 ~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~ 329 (336)
+++|.+|...|++++|+.+|+++++..+................++.++|...+++.
T Consensus 155 ~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 155 SALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC--------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 999999999999999999999999976554444444455556667777777766543
No 29
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.83 E-value=2.2e-19 Score=162.87 Aligned_cols=245 Identities=14% Similarity=0.012 Sum_probs=192.3
Q ss_pred CChhHHhhhH-HHHHHHHHhCCCC--CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCC
Q 019734 77 TLPQLRAASL-VCKSWNDALRPLR--EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMD 151 (336)
Q Consensus 77 ~~~~~~~a~~-~~~~~~~~~~~~~--~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~ 151 (336)
-.+++.+|+. .+.+.++..+..+ ++.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|
T Consensus 37 ~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 112 (368)
T 1fch_A 37 WLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQ----EGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENE 112 (368)
T ss_dssp ---------CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHH----TTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHH----CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCc
Confidence 4577888865 5555554444432 35778999999999 68999999999999987 58999999999999999
Q ss_pred CHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHcC--CHHHHH----------------HHHHHH
Q 019734 152 KKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIAG--HVRAQY----------------QLALCL 207 (336)
Q Consensus 152 ~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~~--~~~a~~----------------~lg~~~ 207 (336)
++++|+.+|+++++. +++.+++.+|.+|.. ++|+.+|+++++.. +..++. .+|.++
T Consensus 113 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (368)
T 1fch_A 113 QELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL 192 (368)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh
Confidence 999999999999865 689999999999998 99999999998863 333332 577777
Q ss_pred hcCCCCccCHHHHHHHHHHHHHC--C--CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhc
Q 019734 208 HRGRGVDFNLQEAARWYLRAAEG--G--YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFT 281 (336)
Q Consensus 208 ~~g~g~~~~~~~A~~~~~~a~~~--~--~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~ 281 (336)
. .+++++|+.+|++++.. . ++.+++.+|.+|... +++++|+.+|++++.. .++.+++++|.++..
T Consensus 193 -~----~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~----g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 263 (368)
T 1fch_A 193 -S----DSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLS----GEYDKAVDCFTAALSVRPNDYLLWNKLGATLAN 263 (368)
T ss_dssp -H----HHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred -h----cccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 4 68999999999999754 4 688999999999763 3999999999999985 568899999999999
Q ss_pred cCCHHHHHHHHHHHHHcCcHHHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCC
Q 019734 282 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334 (336)
Q Consensus 282 ~~~~~~A~~~~~~A~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 334 (336)
.|++++|+.+|++++...+................++.++|....++..+..|
T Consensus 264 ~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 316 (368)
T 1fch_A 264 GNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQR 316 (368)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 99999999999999987654443334444444456778888888887776554
No 30
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.6e-17 Score=142.48 Aligned_cols=215 Identities=11% Similarity=0.048 Sum_probs=187.9
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC--C-------H
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG--S-------T 137 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~--~-------~ 137 (336)
.....+...+..|++++|+..+.+.++.. .++.+++.+|.+|.. .+++++|+.+|++++... + +
T Consensus 7 ~~~~~g~~~~~~~~~~~A~~~~~~a~~~~---~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 79 (258)
T 3uq3_A 7 KEKAEGNKFYKARQFDEAIEHYNKAWELH---KDITYLNNRAAAEYE----KGEYETAISTLNDAVEQGREMRADYKVIS 79 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS---CCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHH----cccHHHHHHHHHHHHHhCcccccchHHHH
Confidence 45667777889999999999999999887 478999999999999 689999999999999862 2 6
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHhcCCCCc
Q 019734 138 LAMVDAGLMYWEMDKKEAAISLYRQAAVL-GDPAGQFNLGISYLQEEAVKLLYQASIAG--HVRAQYQLALCLHRGRGVD 214 (336)
Q Consensus 138 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~--~~~a~~~lg~~~~~g~g~~ 214 (336)
.+++.+|.++...|++++|+.+|+++++. .....+..+|.. ++|+.+|++++... ++.+++.+|.++.. .
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~---~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 152 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNA---EKELKKAEAEAYVNPEKAEEARLEGKEYFT----K 152 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHH---HHHHHHHHHHHHCCHHHHHHHHHHHHHHHH----T
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHH---HHHHHHHHHHHHcCcchHHHHHHHHHHHHH----h
Confidence 89999999999999999999999999976 445555554442 68999999998864 67899999999998 8
Q ss_pred cCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHH
Q 019734 215 FNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVV 290 (336)
Q Consensus 215 ~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~ 290 (336)
+++++|+.+|++++. +.++.+++.+|.+|.... ++++|+.+|++++.. .++.+++.+|.++...|++++|..
T Consensus 153 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~----~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 228 (258)
T 3uq3_A 153 SDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLM----SFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALE 228 (258)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 999999999999975 467999999999997633 999999999999985 568899999999999999999999
Q ss_pred HHHHHHHcC
Q 019734 291 YLELATRAG 299 (336)
Q Consensus 291 ~~~~A~~~~ 299 (336)
+|+++++..
T Consensus 229 ~~~~a~~~~ 237 (258)
T 3uq3_A 229 TLDAARTKD 237 (258)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 999999865
No 31
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.82 E-value=2.3e-18 Score=163.99 Aligned_cols=250 Identities=14% Similarity=0.083 Sum_probs=191.0
Q ss_pred HHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDA 143 (336)
Q Consensus 66 ~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~l 143 (336)
......+..++..|++++|+..+.+.++..|+ ++.+++.+|.+|.. .+++++|+.+|++++.. +++.+++.+
T Consensus 26 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l 99 (537)
T 3fp2_A 26 VQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN--EPVFYSNISACYIS----TGDLEKVIEFTTKALEIKPDHSKALLRR 99 (537)
T ss_dssp HHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT--CHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC--CcHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 34577888889999999999999999999877 89999999999998 68999999999999986 589999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHH----------------------------------------------------------
Q 019734 144 GLMYWEMDKKEAAISLYRQAAV---------------------------------------------------------- 165 (336)
Q Consensus 144 g~~~~~~~~~~~A~~~~~~a~~---------------------------------------------------------- 165 (336)
|.++...|++++|+..|+ ++.
T Consensus 100 a~~~~~~g~~~~A~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (537)
T 3fp2_A 100 ASANESLGNFTDAMFDLS-VLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHL 178 (537)
T ss_dssp HHHHHHHTCHHHHHHHHH-HHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHH
T ss_pred HHHHHHcCCHHHHHHHHH-HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHH
Confidence 999999999999988763 221
Q ss_pred ------------------------------------------------------cCCH-------HHHHHHHHHHHH---
Q 019734 166 ------------------------------------------------------LGDP-------AGQFNLGISYLQ--- 181 (336)
Q Consensus 166 ------------------------------------------------------~~~~-------~a~~~Lg~~~~~--- 181 (336)
++++ .+++.+|.++..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~ 258 (537)
T 3fp2_A 179 EVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNN 258 (537)
T ss_dssp HHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhccc
Confidence 1222 234555555555
Q ss_pred -HHHHHHHHHHHHcC-CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHH
Q 019734 182 -EEAVKLLYQASIAG-HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQAR 257 (336)
Q Consensus 182 -~~A~~~~~ka~~~~-~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~ 257 (336)
++|+.+|+++++.. .+.+++.+|.+|.. .+++++|+.+|+++++ +.++.++..+|.+|... +++++|+
T Consensus 259 ~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~A~ 330 (537)
T 3fp2_A 259 LLDAQVLLQESINLHPTPNSYIFLALTLAD----KENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFIL----QDYKNAK 330 (537)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHTCC----SSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHH----hcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhc----CCHHHHH
Confidence 78888888887652 36788888888877 7888888888888865 46788888888888653 3888888
Q ss_pred HHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCc--HHHHHHHHHHHhhcChhcHHHHHHHHHHhhcC
Q 019734 258 KWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGE--TAADHVKNVILQQLSATSRDRAMLVVDSWRAM 332 (336)
Q Consensus 258 ~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~--~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 332 (336)
.+|++++.. .++.+++.+|.++...|++++|..+|+++++..+ +.+...++.++ ...++.++|....++..+.
T Consensus 331 ~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~--~~~g~~~~A~~~~~~a~~~ 407 (537)
T 3fp2_A 331 EDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEIL--TDRGDFDTAIKQYDIAKRL 407 (537)
T ss_dssp HHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH--HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH--HHhCCHHHHHHHHHHHHHc
Confidence 888888774 4567788888888888888888888888887654 34444444443 3446677777777766543
No 32
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.81 E-value=1.1e-18 Score=151.73 Aligned_cols=222 Identities=13% Similarity=0.035 Sum_probs=188.5
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC-----CHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG-----DPAGQ 172 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~-----~~~a~ 172 (336)
+++.++.+|.++.. .+++++|+.+|+++++. .++.+++.+|.+|...|++++|+.+|+++++.. .+.++
T Consensus 2 n~~~~~~~a~~~~~----~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 77 (272)
T 3u4t_A 2 NDDVEFRYADFLFK----NNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADF 77 (272)
T ss_dssp ---CHHHHHHHHHT----TTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHH
T ss_pred cHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHH
Confidence 45678889999998 68999999999999987 477899999999999999999999999999742 25668
Q ss_pred HHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHH-HHH
Q 019734 173 FNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTS-LCY 243 (336)
Q Consensus 173 ~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg-~~~ 243 (336)
+.+|.++.. ++|+.+|+++++. .++.++..+|.+|.. .+++++|+.+|+++++ +.++.+++++| .+|
T Consensus 78 ~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 78 EYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYN----KGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH----TTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH----ccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 999999998 9999999999875 588999999999998 8999999999999965 57899999999 888
Q ss_pred HcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCC---HHHHHHHHHHHHHcC---cH-------HHHHHHH
Q 019734 244 SFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGE---MMKAVVYLELATRAG---ET-------AADHVKN 308 (336)
Q Consensus 244 ~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~---~~~A~~~~~~A~~~~---~~-------~a~~~~~ 308 (336)
..+ ++++|+..|+++++. .+..+++.+|.++...++ +++|...|+++++.. +. .+...++
T Consensus 154 ~~~-----~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 228 (272)
T 3u4t_A 154 YNK-----EYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIA 228 (272)
T ss_dssp HTT-----CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHH
T ss_pred HHH-----HHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 643 999999999999985 567889999999999998 999999999999753 11 3334444
Q ss_pred HHHhhcChhcHHHHHHHHHHhhcCCCCC
Q 019734 309 VILQQLSATSRDRAMLVVDSWRAMPSLH 336 (336)
Q Consensus 309 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 336 (336)
.++ ...++.++|....++..+..|.+
T Consensus 229 ~~~--~~~~~~~~A~~~~~~al~~~p~~ 254 (272)
T 3u4t_A 229 YYY--TINRDKVKADAAWKNILALDPTN 254 (272)
T ss_dssp HHH--HHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHH--HHcCCHHHHHHHHHHHHhcCccH
Confidence 444 34578999999999999888864
No 33
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.81 E-value=2e-18 Score=163.28 Aligned_cols=257 Identities=12% Similarity=0.003 Sum_probs=212.4
Q ss_pred hHHHHHHHHhcCC---ChhHHhhhHHHHHHHH-----H--hCC-----CCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHH
Q 019734 65 PFDVLNKIAASFT---LPQLRAASLVCKSWND-----A--LRP-----LREAMVLLRWGKRFKHGRGVRKNLDKALDSFL 129 (336)
Q Consensus 65 ~~~~l~~~~~~~~---~~~~~~a~~~~~~~~~-----~--~~~-----~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~ 129 (336)
+...+..+...+. .|++++|...+.+.++ . .++ ..++.+++.+|.++.. .+++++|+.+|+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~ 261 (514)
T 2gw1_A 186 ADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL----KNDPLGAHEDIK 261 (514)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH----SSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH----CCCHHHHHHHHH
Confidence 3344555555444 8999999999999888 3 111 1257899999999998 689999999999
Q ss_pred HHHHcC-CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHH
Q 019734 130 KGAARG-STLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQ 200 (336)
Q Consensus 130 ~A~~~~-~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~ 200 (336)
+++... .+.+++.+|.++...|++++|+.+|+++++. .++.+++.+|.++.. ++|+.+|+++++. .++.++
T Consensus 262 ~~l~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 341 (514)
T 2gw1_A 262 KAIELFPRVNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPY 341 (514)
T ss_dssp HHHHHCCCHHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHH
T ss_pred HHHhhCccHHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHH
Confidence 999863 2889999999999999999999999999876 678999999999998 9999999999876 478899
Q ss_pred HHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CC------HH
Q 019734 201 YQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GH------GK 270 (336)
Q Consensus 201 ~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~------~~ 270 (336)
..+|.+|.. .+++++|+.+|+++++ +.++.+++.+|.+|.... ++++|+.+|++++.. .+ ..
T Consensus 342 ~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~----~~~~A~~~~~~a~~~~~~~~~~~~~~~ 413 (514)
T 2gw1_A 342 IQLACLAYR----ENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKN----DFDKALKQYDLAIELENKLDGIYVGIA 413 (514)
T ss_dssp HHHHHHTTT----TTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHHHTSSSCSSCSH
T ss_pred HHHHHHHHH----cCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHhhhccchHHHHHH
Confidence 999999988 8999999999999975 467899999999997633 999999999999874 33 33
Q ss_pred HHHHHHHHhhc---cCCHHHHHHHHHHHHHcCc--HHHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCCC
Q 019734 271 AQLEHGLGLFT---EGEMMKAVVYLELATRAGE--TAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSL 335 (336)
Q Consensus 271 a~~~lg~~~~~---~~~~~~A~~~~~~A~~~~~--~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 335 (336)
+++.+|.++.. .|++++|..+|++++...+ ..+...++.+ ....++.++|....++..+..|.
T Consensus 414 ~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~--~~~~g~~~~A~~~~~~a~~~~~~ 481 (514)
T 2gw1_A 414 PLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQM--KLQQEDIDEAITLFEESADLART 481 (514)
T ss_dssp HHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH--HHHhcCHHHHHHHHHHHHHhccc
Confidence 89999999999 9999999999999998754 4444444444 44567788899998888877775
No 34
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.81 E-value=2.7e-18 Score=140.81 Aligned_cols=170 Identities=21% Similarity=0.200 Sum_probs=112.3
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~ 177 (336)
++..++.||.+|.. .|++++|+.+|+++++. .++.+++.+|.+|...|++++|+..+.+++..
T Consensus 4 ~~~iy~~lG~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~----------- 68 (184)
T 3vtx_A 4 TTTIYMDIGDKKRT----KGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVL----------- 68 (184)
T ss_dssp CHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-----------
Confidence 45566666666666 46666666666666655 35666666666666666666666666655432
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHH
Q 019734 178 SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQ 255 (336)
Q Consensus 178 ~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~ 255 (336)
...++.++..+|.++.. .++++.|+..++++.. +.+..++..+|.+|... +++++
T Consensus 69 ---------------~~~~~~~~~~~~~~~~~----~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~----g~~~~ 125 (184)
T 3vtx_A 69 ---------------DTTSAEAYYILGSANFM----IDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSM----GEHDK 125 (184)
T ss_dssp ---------------CCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHH
T ss_pred ---------------CchhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHh----CCchh
Confidence 12344555555555555 5677777777777744 45677777777777652 27778
Q ss_pred HHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcHHHHHHH
Q 019734 256 ARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVK 307 (336)
Q Consensus 256 A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~a~~~~ 307 (336)
|+.+|+++++. .++.+++++|.+|...|++++|+.+|++|++..+.++.+.+
T Consensus 126 A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a~~~l 179 (184)
T 3vtx_A 126 AIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAKYEL 179 (184)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHHHHCS
T ss_pred HHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCHHHHH
Confidence 88888877764 55777788888888888888888888888877766665443
No 35
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.81 E-value=2.9e-18 Score=140.60 Aligned_cols=164 Identities=21% Similarity=0.194 Sum_probs=123.3
Q ss_pred hHHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHH
Q 019734 65 PFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVD 142 (336)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~ 142 (336)
+...+..+..++..|++++|+..+.+.++..|+ ++.+++.+|.+|.. .+++++|+.+++++... .++.++..
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~la~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~ 78 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPN--NVETLLKLGKTYMD----IGLPNDAIESLKKFVVLDTTSAEAYYI 78 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcCchhHHHHHH
Confidence 444567777888999999999999999999887 89999999999999 68999999999999886 58999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCc
Q 019734 143 AGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVD 214 (336)
Q Consensus 143 lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~ 214 (336)
+|.++...++++.|+..+.+++.. .++.+++.+|.+|.. ++|+.+|+++++. .++.+++++|.+|.. .
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~----~ 154 (184)
T 3vtx_A 79 LGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG----K 154 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----T
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH----C
Confidence 999999999999999999998754 566777777766665 5555555555443 345555555555554 4
Q ss_pred cCHHHHHHHHHHHHHCCCHHHHHH
Q 019734 215 FNLQEAARWYLRAAEGGYVRAMYN 238 (336)
Q Consensus 215 ~~~~~A~~~~~~a~~~~~~~a~~~ 238 (336)
+++++|+.+|++|++.....+.++
T Consensus 155 g~~~~A~~~~~~al~~~p~~a~~~ 178 (184)
T 3vtx_A 155 GLRDEAVKYFKKALEKEEKKAKYE 178 (184)
T ss_dssp TCHHHHHHHHHHHHHTTHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCCccCHHHH
Confidence 555555555555554444444333
No 36
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.80 E-value=1.2e-18 Score=154.35 Aligned_cols=248 Identities=10% Similarity=0.007 Sum_probs=151.0
Q ss_pred HHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCC
Q 019734 72 IAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151 (336)
Q Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~ 151 (336)
+...|..|++.+++..+.+|....|+. ...+.+.++.+|.. .++++.|+..++.. ......++..++..+...+
T Consensus 6 ~~~~~~~g~y~~ai~~~~~~~~~~p~~-~~e~~~~l~r~yi~----~g~~~~al~~~~~~-~~~~~~a~~~la~~~~~~~ 79 (291)
T 3mkr_A 6 VKNAFYIGSYQQCINEAQRVKPSSPER-DVERDVFLYRAYLA----QRKYGVVLDEIKPS-SAPELQAVRMFAEYLASHS 79 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCCCSHHH-HHHHHHHHHHHHHH----TTCHHHHHHHSCTT-SCHHHHHHHHHHHHHHCST
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCchh-hHHHHHHHHHHHHH----CCCHHHHHHHhccc-CChhHHHHHHHHHHHcCCC
Confidence 334566677777765554443332220 13455666777766 46777777666542 1123455666777777777
Q ss_pred CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH----HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHH
Q 019734 152 KKEAAISLYRQAAV----LGDPAGQFNLGISYLQ----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 223 (336)
Q Consensus 152 ~~~~A~~~~~~a~~----~~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~ 223 (336)
+.++|+..+++.+. ++++.+++.+|.++.. ++|+.+|++ .+++.++..+|.+|.. .+++++|+..
T Consensus 80 ~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~---~~~~~~~~~l~~~~~~----~g~~~~A~~~ 152 (291)
T 3mkr_A 80 RRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ---GDSLECMAMTVQILLK----LDRLDLARKE 152 (291)
T ss_dssp THHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT---CCSHHHHHHHHHHHHH----TTCHHHHHHH
T ss_pred cHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC---CCCHHHHHHHHHHHHH----CCCHHHHHHH
Confidence 77777777777653 3567777777777776 777777777 5677777777777776 6777777777
Q ss_pred HHHHHHCCCHHHHHHHHHHHH---cCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 224 YLRAAEGGYVRAMYNTSLCYS---FGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 224 ~~~a~~~~~~~a~~~lg~~~~---~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
|+++++.........++..+. .+. +++++|+..|+++++. .++.+++++|.++...|++++|...|++++..
T Consensus 153 l~~~~~~~p~~~~~~l~~a~~~l~~~~---~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 153 LKKMQDQDEDATLTQLATAWVSLAAGG---EKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHCT---THHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhhCcCcHHHHHHHHHHHHHhCc---hHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 777765432222223322111 122 2777777777777764 45666777777777777777777777777765
Q ss_pred C--cHHHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCCCC
Q 019734 299 G--ETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 336 (336)
Q Consensus 299 ~--~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 336 (336)
. ++++..+++.+...+. ...+.+....+++++.+|.|
T Consensus 230 ~p~~~~~l~~l~~~~~~~g-~~~eaa~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 230 DSGHPETLINLVVLSQHLG-KPPEVTNRYLSQLKDAHRSH 268 (291)
T ss_dssp CTTCHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHCTTC
T ss_pred CCCCHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHhCCCC
Confidence 3 4455555554444432 12233556667777666665
No 37
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.80 E-value=4.4e-17 Score=146.36 Aligned_cols=234 Identities=14% Similarity=0.015 Sum_probs=187.9
Q ss_pred HHHHHHHHhcCCChhHHhhhHHHHHHHHHhC---CCCCHHHHHHH------------HHHHhcCCCCcCCHHHHHHHHHH
Q 019734 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALR---PLREAMVLLRW------------GKRFKHGRGVRKNLDKALDSFLK 130 (336)
Q Consensus 66 ~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~---~~~~~~a~~~l------------g~~~~~g~g~~~~~~~A~~~~~~ 130 (336)
......+..++..|++++|...+.+.++..+ + +..++..+ |.++.. .+++++|+.+|++
T Consensus 72 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~ 145 (359)
T 3ieg_A 72 AARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQE--EKEAESQLVKADEMQRLRSQALDAFD----GADYTAAITFLDK 145 (359)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccC--hHHHHHHHHHHHHHHHHHHHHHHHHH----ccCHHHHHHHHHH
Confidence 3445555556677888888877777777655 4 56666666 566666 5788889999988
Q ss_pred HHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHH
Q 019734 131 GAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQ 200 (336)
Q Consensus 131 A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~ 200 (336)
++.. .++.++..+|.++...|++++|+..|+++++. .++.+++.+|.++.. ++|+.+|+++++. ++..++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 225 (359)
T 3ieg_A 146 ILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCF 225 (359)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHH
Confidence 8876 57899999999999999999999999999865 789999999999998 9999999999875 455544
Q ss_pred H------------HHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCH----HHHHHHHHHHHcCCCCcccHHHHHHHHHH
Q 019734 201 Y------------QLALCLHRGRGVDFNLQEAARWYLRAAEG--GYV----RAMYNTSLCYSFGEGLPLSHRQARKWMKR 262 (336)
Q Consensus 201 ~------------~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~----~a~~~lg~~~~~~~g~~~~~~~A~~~~~~ 262 (336)
. .+|.++.. .+++++|+.+|+++++. .++ .++..+|.+|... +++++|+.+|++
T Consensus 226 ~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~----~~~~~A~~~~~~ 297 (359)
T 3ieg_A 226 AHYKQVKKLNKLIESAEELIR----DGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKD----EKPVEAIRICSE 297 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHc----cCHHHHHHHHHH
Confidence 3 44888887 79999999999999764 344 4466789999763 399999999999
Q ss_pred HHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC--cHHHHHHHHHHHhh
Q 019734 263 AADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG--ETAADHVKNVILQQ 313 (336)
Q Consensus 263 a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~--~~~a~~~~~~~~~~ 313 (336)
++.. +++.+++.+|.++...|++++|..+|+++++.. ++.+...+..+...
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 352 (359)
T 3ieg_A 298 VLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRL 352 (359)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Confidence 9985 578899999999999999999999999999875 45555555555443
No 38
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.2e-17 Score=143.40 Aligned_cols=216 Identities=13% Similarity=0.033 Sum_probs=179.5
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CC-------H
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR-GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GD-------P 169 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~-~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~-------~ 169 (336)
.+.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|.++++. .+ +
T Consensus 4 ~a~~~~~~g~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 79 (258)
T 3uq3_A 4 MADKEKAEGNKFYK----ARQFDEAIEHYNKAWELHKDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVIS 79 (258)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhhccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHH
Confidence 46789999999999 68999999999999876 57899999999999999999999999999865 23 7
Q ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHHHHHH
Q 019734 170 AGQFNLGISYLQ----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNTSLCY 243 (336)
Q Consensus 170 ~a~~~Lg~~~~~----~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~ 243 (336)
.+++.+|.++.. ++|+.+|+++++.... +.++.. .+++++|+..+++++.. .++.++..+|.++
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT------ADILTK----LRNAEKELKKAEAEAYVNPEKAEEARLEGKEY 149 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC------HHHHHH----HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCch------hHHHHH----HhHHHHHHHHHHHHHHcCcchHHHHHHHHHHH
Confidence 899999999998 9999999999986422 334444 56789999999999776 4678899999999
Q ss_pred HcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcHHHHHHHHHHHhhcChhcHHH
Q 019734 244 SFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 321 (336)
Q Consensus 244 ~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~a~~~~~~~~~~~~~~~~~~ 321 (336)
... +++++|+.+|++++.. .++.+++++|.++...|++++|+.+|+++++..+................++.++
T Consensus 150 ~~~----~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~ 225 (258)
T 3uq3_A 150 FTK----SDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYAS 225 (258)
T ss_dssp HHT----TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHh----cCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHH
Confidence 763 3999999999999985 5688899999999999999999999999998765444433333444444577888
Q ss_pred HHHHHHHhhcCC
Q 019734 322 AMLVVDSWRAMP 333 (336)
Q Consensus 322 a~~~~~~~~~~~ 333 (336)
|....++..+..
T Consensus 226 A~~~~~~a~~~~ 237 (258)
T 3uq3_A 226 ALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC
Confidence 888888877665
No 39
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.79 E-value=1.8e-17 Score=152.78 Aligned_cols=255 Identities=16% Similarity=0.065 Sum_probs=200.6
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCC--CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--------CC
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLR--EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--------GS 136 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--------~~ 136 (336)
.++..+..++..|++.+|+..+.+.++..++.. .+.+++.+|.+|.. .+++++|+.+|++++.. ..
T Consensus 50 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~ 125 (411)
T 4a1s_A 50 ELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFY----LGDYNKAMQYHKHDLTLAKSMNDRLGE 125 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHccCchHH
Confidence 345677778899999999999999999866621 13689999999998 68999999999999875 24
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----C----CHHHHHHHHHHHHH---------------------HHHHHH
Q 019734 137 TLAMVDAGLMYWEMDKKEAAISLYRQAAVL----G----DPAGQFNLGISYLQ---------------------EEAVKL 187 (336)
Q Consensus 137 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~----~~~a~~~Lg~~~~~---------------------~~A~~~ 187 (336)
..+++.+|.+|...|++++|+.+|+++++. + ...+++++|.+|.. ++|+.+
T Consensus 126 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~ 205 (411)
T 4a1s_A 126 AKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEF 205 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHH
Confidence 578899999999999999999999999854 2 35688889998875 468888
Q ss_pred HHHHHHc----C----CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCCCCcc
Q 019734 188 LYQASIA----G----HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----GY----VRAMYNTSLCYSFGEGLPL 251 (336)
Q Consensus 188 ~~ka~~~----~----~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~g~~~ 251 (336)
|+++++. + ...++.++|.+|.. .+++++|+.+|+++++. ++ ..++.++|.+|... +
T Consensus 206 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~----g 277 (411)
T 4a1s_A 206 YQENLKLMRDLGDRGAQGRACGNLGNTYYL----LGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFL----G 277 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTT----T
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHC----c
Confidence 8888653 2 34588999999998 89999999999999753 23 34889999999753 3
Q ss_pred cHHHHHHHHHHHHHc----CC----HHHHHHHHHHhhccCCHHHHHHHHHHHHHcC----c--HHHHHHHHHHHhhcChh
Q 019734 252 SHRQARKWMKRAADC----GH----GKAQLEHGLGLFTEGEMMKAVVYLELATRAG----E--TAADHVKNVILQQLSAT 317 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~----~--~~a~~~~~~~~~~~~~~ 317 (336)
++++|+.+|++++.. ++ ..++..+|.+|...|++++|..+|++++... + ..+.............+
T Consensus 278 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 357 (411)
T 4a1s_A 278 QFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIG 357 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhc
Confidence 999999999999874 22 5677999999999999999999999998752 2 12223333333344457
Q ss_pred cHHHHHHHHHHhhcCC
Q 019734 318 SRDRAMLVVDSWRAMP 333 (336)
Q Consensus 318 ~~~~a~~~~~~~~~~~ 333 (336)
+.++|...+++..+..
T Consensus 358 ~~~~A~~~~~~al~~~ 373 (411)
T 4a1s_A 358 GHERALKYAEQHLQLA 373 (411)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHH
Confidence 7888888887766543
No 40
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.79 E-value=5.4e-17 Score=156.74 Aligned_cols=224 Identities=15% Similarity=0.043 Sum_probs=195.3
Q ss_pred HhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcC
Q 019734 73 AASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEM 150 (336)
Q Consensus 73 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~ 150 (336)
......|++++|..++....+..++ ++.+++.+|.+|.. .+++++|+.+|+++++. .+..+++.+|.+|...
T Consensus 347 ~~~~~~g~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 420 (597)
T 2xpi_A 347 ASLHESGEKNKLYLISNDLVDRHPE--KAVTWLAVGIYYLC----VNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIE 420 (597)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTT--SHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHhhCcc--cHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 3345678899999999988877665 89999999999998 68999999999999876 5789999999999999
Q ss_pred CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHH
Q 019734 151 DKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAAR 222 (336)
Q Consensus 151 ~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~ 222 (336)
|++++|+.+|+++++. +++.+++.+|.+|.. ++|+.+|+++++. .++.++..+|.+|.. .+++++|+.
T Consensus 421 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~ 496 (597)
T 2xpi_A 421 GEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFN----KSDMQTAIN 496 (597)
T ss_dssp TCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----TTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----hCCHHHHHH
Confidence 9999999999999865 678999999999988 9999999999875 589999999999998 899999999
Q ss_pred HHHHHHHC-------CC--HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHH
Q 019734 223 WYLRAAEG-------GY--VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVY 291 (336)
Q Consensus 223 ~~~~a~~~-------~~--~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~ 291 (336)
+|+++++. .+ ..++..+|.+|... +++++|+.+|+++++. .++.++..||.+|...|++++|..+
T Consensus 497 ~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~----g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~ 572 (597)
T 2xpi_A 497 HFQNALLLVKKTQSNEKPWAATWANLGHAYRKL----KMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITH 572 (597)
T ss_dssp HHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhhhccccchhhHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHH
Confidence 99999764 12 67899999999763 3999999999999875 5788999999999999999999999
Q ss_pred HHHHHHcCc--HHHHHHHHHH
Q 019734 292 LELATRAGE--TAADHVKNVI 310 (336)
Q Consensus 292 ~~~A~~~~~--~~a~~~~~~~ 310 (336)
|+++++..+ +.+...++.+
T Consensus 573 ~~~~l~~~p~~~~~~~~l~~~ 593 (597)
T 2xpi_A 573 LHESLAISPNEIMASDLLKRA 593 (597)
T ss_dssp HHHHHHHCTTCHHHHHHHHHT
T ss_pred HHHHHhcCCCChHHHHHHHHH
Confidence 999998754 4555554443
No 41
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.79 E-value=1.6e-17 Score=158.13 Aligned_cols=242 Identities=14% Similarity=0.033 Sum_probs=149.2
Q ss_pred hhHHhhhHHHHHHHHHhCCCCC-----HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHhcCCC
Q 019734 79 PQLRAASLVCKSWNDALRPLRE-----AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR-GSTLAMVDAGLMYWEMDK 152 (336)
Q Consensus 79 ~~~~~a~~~~~~~~~~~~~~~~-----~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~-~~~~a~~~lg~~~~~~~~ 152 (336)
+++.+|+..+.+.++..|+... +.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|+
T Consensus 216 ~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 291 (537)
T 3fp2_A 216 DLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFL----KNNLLDAQVLLQESINLHPTPNSYIFLALTLADKEN 291 (537)
T ss_dssp HHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSC
T ss_pred HHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHh----cccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcC
Confidence 3566676666666666554211 3356666666666 46777777777777765 236667777777777777
Q ss_pred HHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHH
Q 019734 153 KEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWY 224 (336)
Q Consensus 153 ~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~ 224 (336)
+++|+.+|+++++. +++.+++.+|.++.. ++|+.+|+++++. .++.+++.+|.+|.. .+++++|+.+|
T Consensus 292 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~ 367 (537)
T 3fp2_A 292 SQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK----QGKFTESEAFF 367 (537)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH----TTCHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHH
Confidence 77777777777653 566777777777766 7777777777654 456677777777766 66777777777
Q ss_pred HHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC--C------HHHHHHHHHHhhcc----------CC
Q 019734 225 LRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG--H------GKAQLEHGLGLFTE----------GE 284 (336)
Q Consensus 225 ~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~--~------~~a~~~lg~~~~~~----------~~ 284 (336)
+++++ +.++.++..+|.++... +++++|+.+|++++... + ....+.+|.++... |+
T Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~~~----g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 443 (537)
T 3fp2_A 368 NETKLKFPTLPEVPTFFAEILTDR----GDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEK 443 (537)
T ss_dssp HHHHHHCTTCTHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHh----CCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhH
Confidence 77654 35566777777777542 26777777777766531 1 12245556666666 77
Q ss_pred HHHHHHHHHHHHHcCc--HHHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCC
Q 019734 285 MMKAVVYLELATRAGE--TAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334 (336)
Q Consensus 285 ~~~A~~~~~~A~~~~~--~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 334 (336)
+++|+.+|++++...+ ..+...++.++ ...++.++|...+++..+..|
T Consensus 444 ~~~A~~~~~~a~~~~p~~~~~~~~l~~~~--~~~g~~~~A~~~~~~al~~~~ 493 (537)
T 3fp2_A 444 FNAAIKLLTKACELDPRSEQAKIGLAQLK--LQMEKIDEAIELFEDSAILAR 493 (537)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHH--HHhccHHHHHHHHHHHHHhCC
Confidence 7777777777766543 33333333333 334556666666666655544
No 42
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.77 E-value=1.9e-17 Score=156.69 Aligned_cols=181 Identities=18% Similarity=0.065 Sum_probs=85.7
Q ss_pred CHHHHHHHHHHHhcCCCCcCCH-HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNL-DKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL-GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~-~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-~~~~a~~~L 175 (336)
++.+++.+|.+|.. .+++ ++|+.+|+++++. .++.+++.+|.+|...|++++|+.+|+++++. .++.++++|
T Consensus 101 ~a~~~~~lg~~~~~----~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~l 176 (474)
T 4abn_A 101 EAQALMLKGKALNV----TPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNL 176 (474)
T ss_dssp CHHHHHHHHHHHTS----SSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHh----ccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCHHHHHHH
Confidence 45555555555544 3455 5555555555544 24455555555555555555555555555443 124444555
Q ss_pred HHHHHH-------------HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCc--------cCHHHHHHHHHHHHH--C
Q 019734 176 GISYLQ-------------EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVD--------FNLQEAARWYLRAAE--G 230 (336)
Q Consensus 176 g~~~~~-------------~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~--------~~~~~A~~~~~~a~~--~ 230 (336)
|.++.. ++|+.+|+++++. +++.+++++|.+|.. . +++++|+.+|++++. +
T Consensus 177 g~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~~~~~~~~~g~~~~A~~~~~~al~~~p 252 (474)
T 4abn_A 177 SMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLS----LYFNTGQNPKISQQALSAYAQAEKVDR 252 (474)
T ss_dssp HHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HHHHTTCCHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----HHHhhccccchHHHHHHHHHHHHHhCC
Confidence 554422 4455555554432 344445555554443 2 445555555554432 2
Q ss_pred ---CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHH
Q 019734 231 ---GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYL 292 (336)
Q Consensus 231 ---~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~ 292 (336)
.++.+++++|.+|... +++++|+.+|++++.. +++.++.+++.++...|++++|+..+
T Consensus 253 ~~~~~~~~~~~lg~~~~~~----g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi~~~ 315 (474)
T 4abn_A 253 KASSNPDLHLNRATLHKYE----ESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLESK 315 (474)
T ss_dssp GGGGCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455555554331 1455555555554442 33444445555444444444444433
No 43
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.77 E-value=1.1e-16 Score=137.46 Aligned_cols=189 Identities=16% Similarity=0.029 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLG 176 (336)
Q Consensus 101 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg 176 (336)
+.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|+++++. .++.+++.+|
T Consensus 37 ~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 112 (252)
T 2ho1_A 37 RDAYIQLGLGYLQ----RGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYG 112 (252)
T ss_dssp HHHHHHHHHHHHH----TTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHH----cCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHH
Confidence 5666777777776 46777888888877765 46777777888887778888888888777654 5677777777
Q ss_pred HHHHH----HHHHHHHHHHHH--c--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcC
Q 019734 177 ISYLQ----EEAVKLLYQASI--A--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFG 246 (336)
Q Consensus 177 ~~~~~----~~A~~~~~ka~~--~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~ 246 (336)
.++.. ++|+.+|+++++ . .+..+++.+|.+|.. .+++++|+.+|+++++ +.+..+++.+|.+|...
T Consensus 113 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 188 (252)
T 2ho1_A 113 GFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ----MKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKE 188 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHc
Confidence 77776 778888887766 2 356788888888887 7899999999999865 45788999999999763
Q ss_pred CCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcH
Q 019734 247 EGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGET 301 (336)
Q Consensus 247 ~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~ 301 (336)
+++++|+.++++++.. .+..++..++.++...|++++|..+++++++..+.
T Consensus 189 ----g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~ 241 (252)
T 2ho1_A 189 ----REYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPG 241 (252)
T ss_dssp ----TCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred ----CCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC
Confidence 3899999999999875 56788899999999999999999999999887543
No 44
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.77 E-value=2.6e-17 Score=140.14 Aligned_cols=191 Identities=16% Similarity=0.132 Sum_probs=108.2
Q ss_pred HHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHH
Q 019734 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLM 146 (336)
Q Consensus 69 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~ 146 (336)
+..+...+..|++++|...+.+.++..+. ++.+++.+|.+|.. .+++++|+.+|++++.. .+..+++.+|.+
T Consensus 27 ~~~a~~~~~~~~~~~A~~~~~~~l~~~~~--~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 100 (243)
T 2q7f_A 27 GQQMGRGSEFGDYEKAAEAFTKAIEENKE--DAIPYINFANLLSS----VNELERALAFYDKALELDSSAATAYYGAGNV 100 (243)
T ss_dssp ---------------CCTTHHHHHTTCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHhCcc--cHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 34444444555555555555544444333 44555555555554 34555555555555443 244555555555
Q ss_pred HhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHH
Q 019734 147 YWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226 (336)
Q Consensus 147 ~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~ 226 (336)
+...|++++|+.+|+++++. ...++.+++.+|.++.. .+++++|+.+|++
T Consensus 101 ~~~~~~~~~A~~~~~~~~~~--------------------------~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~ 150 (243)
T 2q7f_A 101 YVVKEMYKEAKDMFEKALRA--------------------------GMENGDLFYMLGTVLVK----LEQPKLALPYLQR 150 (243)
T ss_dssp HHHTTCHHHHHHHHHHHHHH--------------------------TCCSHHHHHHHHHHHHH----TSCHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHh--------------------------CCCCHHHHHHHHHHHHH----hccHHHHHHHHHH
Confidence 55555555555555544432 12355566666666666 6777777777777
Q ss_pred HHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 227 AAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 227 a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
+++. .+..+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.+|...|++++|..+|+++++..
T Consensus 151 ~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 223 (243)
T 2q7f_A 151 AVELNENDTEARFQFGMCLAN----EGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQ 223 (243)
T ss_dssp HHHHCTTCHHHHHHHHHHHHH----HTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHC
T ss_pred HHHhCCccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccC
Confidence 7543 567777777777764 23777888888887764 456777888888888888888888888887764
No 45
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.77 E-value=9.4e-18 Score=157.56 Aligned_cols=216 Identities=13% Similarity=0.022 Sum_probs=110.7
Q ss_pred cCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcC--
Q 019734 75 SFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEM-- 150 (336)
Q Consensus 75 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~-- 150 (336)
.+..+++++|+..+.+.++..|+ ++.++..+|.++.. .+..++.++|+..|++|++. .++.++..+|..+...
T Consensus 148 ~~~~~~y~~A~~~~~kal~~~p~--~~~~~~~~~~~~~~-l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~ 224 (472)
T 4g1t_A 148 KCGGNQNERAKVCFEKALEKKPK--NPEFTSGLAIASYR-LDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMRE 224 (472)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSTT--CHHHHHHHHHHHHH-HHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC-
T ss_pred HHccccHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH-hcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHh
Confidence 34667888888888888888766 77777777776543 11123445555666655554 3455555555443322
Q ss_pred --CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCC---------
Q 019734 151 --DKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGR--------- 211 (336)
Q Consensus 151 --~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~--------- 211 (336)
+++++|+.+|++++.. .++.++.++|.+|.. ++|+.+|+++++. +++.+++++|.+|..-.
T Consensus 225 ~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~ 304 (472)
T 4g1t_A 225 EGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLREN 304 (472)
T ss_dssp -----CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC---
T ss_pred hhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4455555555555433 455555555555555 5555555555443 34555555555543100
Q ss_pred ------CCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCH-----HHHHHHHHH
Q 019734 212 ------GVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG-----KAQLEHGLG 278 (336)
Q Consensus 212 ------g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~-----~a~~~lg~~ 278 (336)
.....+++|+.+|+++.+ +.+..+++.+|.+|.... ++++|+.+|++++..... ..++++|.+
T Consensus 305 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~----~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~ 380 (472)
T 4g1t_A 305 GMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALAD----QYEEAEYYFQKEFSKELTPVAKQLLHLRYGNF 380 (472)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTT----CHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhc----cHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Confidence 001234455555555533 234445555555554322 555555555555543211 112344432
Q ss_pred -hhccCCHHHHHHHHHHHHH
Q 019734 279 -LFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 279 -~~~~~~~~~A~~~~~~A~~ 297 (336)
+...|++++|+.+|++|+.
T Consensus 381 ~~~~~~~~~~Ai~~y~kal~ 400 (472)
T 4g1t_A 381 QLYQMKCEDKAIHHFIEGVK 400 (472)
T ss_dssp HHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHh
Confidence 2345555555555555544
No 46
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.77 E-value=7.2e-17 Score=143.36 Aligned_cols=222 Identities=16% Similarity=-0.004 Sum_probs=181.8
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
+...++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|+++++. .++.+++.+
T Consensus 20 ~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 95 (327)
T 3cv0_A 20 YHENPMEEGLSMLK----LANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAAL 95 (327)
T ss_dssp GSSCHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhHHHHHHHHHHHH----hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHH
Confidence 34567888999988 58999999999999986 58899999999999999999999999999865 689999999
Q ss_pred HHHHHH----HHHHHHHHHHHHcC--CHHHHHHH--------------HH-HHhcCCCCccCHHHHHHHHHHHHHC--CC
Q 019734 176 GISYLQ----EEAVKLLYQASIAG--HVRAQYQL--------------AL-CLHRGRGVDFNLQEAARWYLRAAEG--GY 232 (336)
Q Consensus 176 g~~~~~----~~A~~~~~ka~~~~--~~~a~~~l--------------g~-~~~~g~g~~~~~~~A~~~~~~a~~~--~~ 232 (336)
|.++.. ++|+.+|+++++.. +...+..+ |. ++.. .+++++|+.+|+++++. .+
T Consensus 96 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~~~~~~~~~ 171 (327)
T 3cv0_A 96 AVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAA----PNEYRECRTLLHAALEMNPND 171 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTS----HHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHH----cccHHHHHHHHHHHHhhCCCC
Confidence 999988 99999999998763 44444444 44 4554 78999999999999754 67
Q ss_pred HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCc--HHHHHHHH
Q 019734 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGE--TAADHVKN 308 (336)
Q Consensus 233 ~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~--~~a~~~~~ 308 (336)
..++..+|.+|... +++++|+.++++++.. +++.++..+|.++...|++++|..+|+++++..+ ..+...++
T Consensus 172 ~~~~~~la~~~~~~----~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 247 (327)
T 3cv0_A 172 AQLHASLGVLYNLS----NNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMA 247 (327)
T ss_dssp HHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHh----ccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 99999999999763 3999999999999875 5688899999999999999999999999998754 45555554
Q ss_pred HHHhhcChhcHHHHHHHHHHhhcCCCC
Q 019734 309 VILQQLSATSRDRAMLVVDSWRAMPSL 335 (336)
Q Consensus 309 ~~~~~~~~~~~~~a~~~~~~~~~~~~~ 335 (336)
.+ ....++.++|....++..+..|.
T Consensus 248 ~~--~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 248 VS--YSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HH--HHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HH--HHHhccHHHHHHHHHHHHHhCCc
Confidence 44 44557788888888887766554
No 47
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.76 E-value=2.3e-16 Score=139.90 Aligned_cols=257 Identities=16% Similarity=0.056 Sum_probs=201.0
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCC--HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----C----C
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLRE--AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----G----S 136 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~--~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~----~ 136 (336)
.++..+...+..|++++|+..+.+.++..+.... +.+++.+|.+|.. .+++++|+.+|++++.. + .
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY----LHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 4566677788999999999999999998665211 5788999999998 58999999999998865 2 3
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHHH------------------------HHH
Q 019734 137 TLAMVDAGLMYWEMDKKEAAISLYRQAAVL----GD----PAGQFNLGISYLQ------------------------EEA 184 (336)
Q Consensus 137 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~~----~~a~~~Lg~~~~~------------------------~~A 184 (336)
..++..+|.++...|++++|+.+|.++++. ++ ..++..+|.++.. ++|
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A 162 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAA 162 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHH
Confidence 568899999999999999999999999854 33 4578889988865 468
Q ss_pred HHHHHHHHHc----C----CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCCC
Q 019734 185 VKLLYQASIA----G----HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----GY----VRAMYNTSLCYSFGEG 248 (336)
Q Consensus 185 ~~~~~ka~~~----~----~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~g 248 (336)
+.+|+++++. + ...++.++|.+|.. .+++++|+.+|+++++. ++ ..++..+|.+|..
T Consensus 163 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~--- 235 (338)
T 3ro2_A 163 VDLYEENLSLVTALGDRAAQGRAFGNLGNTHYL----LGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIF--- 235 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH---
Confidence 8888887653 2 34588999999998 89999999999999653 22 3488999999975
Q ss_pred CcccHHHHHHHHHHHHHc----CC----HHHHHHHHHHhhccCCHHHHHHHHHHHHHcC----cH--HHHHHHHHHHhhc
Q 019734 249 LPLSHRQARKWMKRAADC----GH----GKAQLEHGLGLFTEGEMMKAVVYLELATRAG----ET--AADHVKNVILQQL 314 (336)
Q Consensus 249 ~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~----~~--~a~~~~~~~~~~~ 314 (336)
.+++++|..++++++.. ++ ..++..+|.++...|++++|..+|++++... +. .+...........
T Consensus 236 -~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~ 314 (338)
T 3ro2_A 236 -LGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYT 314 (338)
T ss_dssp -HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 33999999999999863 22 5677899999999999999999999998752 21 1223333334444
Q ss_pred ChhcHHHHHHHHHHhhcCCCC
Q 019734 315 SATSRDRAMLVVDSWRAMPSL 335 (336)
Q Consensus 315 ~~~~~~~a~~~~~~~~~~~~~ 335 (336)
..++.++|....++..+..+.
T Consensus 315 ~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 315 ALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHTCHHHHHHHHHHHHHC---
T ss_pred HcCChHHHHHHHHHHHHHHHh
Confidence 567888999998888776553
No 48
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.76 E-value=2.1e-16 Score=144.60 Aligned_cols=254 Identities=15% Similarity=0.053 Sum_probs=198.9
Q ss_pred HHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCC--HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----C----
Q 019734 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLRE--AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----G---- 135 (336)
Q Consensus 66 ~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~--~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~---- 135 (336)
..++..+..++..|++.+|+..+.+.++..+.... +.+++.+|.+|.. .+++++|+.+|++++.. +
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~ 85 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY----LHDYAKALEYHHHDLTLARTIGDQLG 85 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHhccccHH
Confidence 34567777888999999999999999998665221 5789999999998 68999999999999765 2
Q ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHHH------------------------HH
Q 019734 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVL----GD----PAGQFNLGISYLQ------------------------EE 183 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~~----~~a~~~Lg~~~~~------------------------~~ 183 (336)
...++..+|.+|...|++++|+.+|.++++. ++ +.++..+|.+|.. ++
T Consensus 86 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~ 165 (406)
T 3sf4_A 86 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQA 165 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHH
Confidence 3568899999999999999999999999854 33 5588899998875 46
Q ss_pred HHHHHHHHHHc----C----CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCC
Q 019734 184 AVKLLYQASIA----G----HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----GY----VRAMYNTSLCYSFGE 247 (336)
Q Consensus 184 A~~~~~ka~~~----~----~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~ 247 (336)
|+.+|+++++. + ...++.++|.+|.. .+++++|+.+|+++++. ++ ..++.++|.+|...
T Consensus 166 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~- 240 (406)
T 3sf4_A 166 AVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYL----LGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFL- 240 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc-
Confidence 88888888653 2 34678999999998 89999999999999753 22 34889999999763
Q ss_pred CCcccHHHHHHHHHHHHHc----CC----HHHHHHHHHHhhccCCHHHHHHHHHHHHHc----CcH--HHHHHHHHHHhh
Q 019734 248 GLPLSHRQARKWMKRAADC----GH----GKAQLEHGLGLFTEGEMMKAVVYLELATRA----GET--AADHVKNVILQQ 313 (336)
Q Consensus 248 g~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~----~~~--~a~~~~~~~~~~ 313 (336)
+++++|+.+|++++.. ++ ..++.++|.+|...|++++|..+|++++.. ++. .+..........
T Consensus 241 ---g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~ 317 (406)
T 3sf4_A 241 ---GEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAY 317 (406)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ---CChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 3999999999999863 22 557789999999999999999999999875 221 122333333333
Q ss_pred cChhcHHHHHHHHHHhhc
Q 019734 314 LSATSRDRAMLVVDSWRA 331 (336)
Q Consensus 314 ~~~~~~~~a~~~~~~~~~ 331 (336)
...++.++|...+++..+
T Consensus 318 ~~~g~~~~A~~~~~~al~ 335 (406)
T 3sf4_A 318 TALGNHDQAMHFAEKHLE 335 (406)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 445677778777666543
No 49
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.76 E-value=1.1e-16 Score=138.99 Aligned_cols=212 Identities=14% Similarity=0.042 Sum_probs=175.4
Q ss_pred CCChhHHhhhHHHHHHHHHhCC--CCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCC
Q 019734 76 FTLPQLRAASLVCKSWNDALRP--LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMD 151 (336)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~--~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~ 151 (336)
...+++++|+..+.+.++..+. ..++.+++.+|.+|.. .+++++|+.+|++++.. .++.+++.+|.+|...|
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~ 91 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDS----LGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAG 91 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT
T ss_pred CccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHH----cccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHcc
Confidence 4568999999988888876331 1368899999999999 68999999999999987 47999999999999999
Q ss_pred CHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHH
Q 019734 152 KKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARW 223 (336)
Q Consensus 152 ~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~ 223 (336)
++++|+.+|+++++. +++.+++.+|.+|.. ++|+.+|+++++. +++.....++.++. .+++++|+.+
T Consensus 92 ~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~~~~A~~~ 166 (275)
T 1xnf_A 92 NFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQ-----KLDEKQAKEV 166 (275)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-----HHCHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-----hcCHHHHHHH
Confidence 999999999999875 689999999999998 9999999999875 46666666665544 4789999999
Q ss_pred HHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCC------HHHHHHHHHHhhccCCHHHHHHHHHHH
Q 019734 224 YLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH------GKAQLEHGLGLFTEGEMMKAVVYLELA 295 (336)
Q Consensus 224 ~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~------~~a~~~lg~~~~~~~~~~~A~~~~~~A 295 (336)
|++++.. .+... +.++.++.. . .+.++|+..+++++.... +.+++.+|.+|...|++++|..+|+++
T Consensus 167 ~~~~~~~~~~~~~~-~~~~~~~~~-~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 241 (275)
T 1xnf_A 167 LKQHFEKSDKEQWG-WNIVEFYLG-N---ISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLA 241 (275)
T ss_dssp HHHHHHHSCCCSTH-HHHHHHHTT-S---SCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhcCCcchHH-HHHHHHHHH-h---cCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9988754 33333 345555543 2 267899999999976533 577899999999999999999999999
Q ss_pred HHcCcH
Q 019734 296 TRAGET 301 (336)
Q Consensus 296 ~~~~~~ 301 (336)
+...+.
T Consensus 242 l~~~p~ 247 (275)
T 1xnf_A 242 VANNVH 247 (275)
T ss_dssp HTTCCT
T ss_pred HhCCch
Confidence 987653
No 50
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.75 E-value=9e-17 Score=136.81 Aligned_cols=169 Identities=16% Similarity=0.158 Sum_probs=132.4
Q ss_pred hHHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHH
Q 019734 65 PFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVD 142 (336)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~ 142 (336)
+......+...+..|++++|...+.+.++..+. ++.+++.+|.+|.. .+++++|+.+|+++++. .++.+++.
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~ 130 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSS--AATAYYGAGNVYVV----KEMYKEAKDMFEKALRAGMENGDLFYM 130 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHTCCSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc--chHHHHHHHHHHHH----hccHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 444566666777899999999999999988766 88999999999998 68999999999999987 47899999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCc
Q 019734 143 AGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVD 214 (336)
Q Consensus 143 lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~ 214 (336)
+|.++...|++++|+.+|+++++. +++.+++.+|.++.. ++|+.+|+++++. .++.+++.+|.+|.. .
T Consensus 131 ~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~ 206 (243)
T 2q7f_A 131 LGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY----K 206 (243)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----T
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH----c
Confidence 999999999999999999999865 567888888888776 7777777777654 456666777777666 5
Q ss_pred cCHHHHHHHHHHHHH--CCCHHHHHHHHHHH
Q 019734 215 FNLQEAARWYLRAAE--GGYVRAMYNTSLCY 243 (336)
Q Consensus 215 ~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~ 243 (336)
+++++|+.+|+++++ +.+..++..++.+.
T Consensus 207 ~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l~ 237 (243)
T 2q7f_A 207 ENREKALEMLDKAIDIQPDHMLALHAKKLLG 237 (243)
T ss_dssp TCTTHHHHHHHHHHHHCTTCHHHHHHHTC--
T ss_pred cCHHHHHHHHHHHHccCcchHHHHHHHHHHH
Confidence 667777777776644 34555555555443
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.75 E-value=3.7e-17 Score=161.49 Aligned_cols=159 Identities=14% Similarity=0.050 Sum_probs=106.2
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
+++++++||.+|.. .+++++|+.+|++|++. +++.++++||.+|...|++++|+.+|++|++. ++++++++|
T Consensus 8 ~a~al~nLG~~~~~----~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nL 83 (723)
T 4gyw_A 8 HADSLNNLANIKRE----QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNM 83 (723)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 67778888888777 57888888888887776 47777888888888888888777777777643 445555555
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccH
Q 019734 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSH 253 (336)
Q Consensus 176 g~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~ 253 (336)
|.+| .. .+++++|+.+|+++++ +++..++++||.+|... +++
T Consensus 84 g~~l----------------------------~~----~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~----g~~ 127 (723)
T 4gyw_A 84 GNTL----------------------------KE----MQDVQGALQCYTRAIQINPAFADAHSNLASIHKDS----GNI 127 (723)
T ss_dssp HHHH----------------------------HH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCH
T ss_pred HHHH----------------------------HH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----CCH
Confidence 5554 44 5566666666666643 35566666666666442 266
Q ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 254 RQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 254 ~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
++|+.+|+++++. +++.++.+||.++...|++++|...|+++++.
T Consensus 128 ~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l 174 (723)
T 4gyw_A 128 PEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSI 174 (723)
T ss_dssp HHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHh
Confidence 6666666666653 45666666666666666666666666666654
No 52
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.75 E-value=3.7e-17 Score=161.42 Aligned_cols=156 Identities=15% Similarity=0.063 Sum_probs=137.5
Q ss_pred hHHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHH
Q 019734 65 PFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVD 142 (336)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~ 142 (336)
+......+..+...|++++|+..+++.++..|+ ++.++++||.+|.. .+++++|+.+|++|++. ++++++++
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~--~~~a~~nLg~~l~~----~g~~~eA~~~~~~Al~l~P~~~~a~~n 82 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPE--FAAAHSNLASVLQQ----QGKLQEALMHYKEAIRISPTFADAYSN 82 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 445566777788999999999999999999887 89999999999999 69999999999999987 58999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCc
Q 019734 143 AGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVD 214 (336)
Q Consensus 143 lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~ 214 (336)
||.+|...|++++|+..|++|++. ++++++++||.+|.. ++|+.+|++|++. +++.++++||.+|.. .
T Consensus 83 Lg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~----~ 158 (723)
T 4gyw_A 83 MGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQI----V 158 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH----T
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHh----c
Confidence 999999999999999999999865 788999999999888 8888888888765 578888888888887 7
Q ss_pred cCHHHHHHHHHHHHHC
Q 019734 215 FNLQEAARWYLRAAEG 230 (336)
Q Consensus 215 ~~~~~A~~~~~~a~~~ 230 (336)
+++++|++.|+++++.
T Consensus 159 g~~~~A~~~~~kal~l 174 (723)
T 4gyw_A 159 CDWTDYDERMKKLVSI 174 (723)
T ss_dssp TCCTTHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHh
Confidence 8888888888887653
No 53
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.75 E-value=1.4e-16 Score=149.59 Aligned_cols=256 Identities=14% Similarity=0.010 Sum_probs=171.3
Q ss_pred HHHhcCCChhHHhhhHHHHHHHHHhC-------CCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc---------
Q 019734 71 KIAASFTLPQLRAASLVCKSWNDALR-------PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--------- 134 (336)
Q Consensus 71 ~~~~~~~~~~~~~a~~~~~~~~~~~~-------~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--------- 134 (336)
.+...+..|++++|+..+++.++..+ +...+.++.++|.+|.. .+++++|+.+|+++...
T Consensus 57 Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~----~g~~~~A~~~~~ka~~i~~~~~~~~~ 132 (472)
T 4g1t_A 57 LAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH----MGRLSDVQIYVDKVKHVCEKFSSPYR 132 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHhHhcccccc
Confidence 34455678999999998888876521 23457788899999998 68999999999998763
Q ss_pred -CCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH-------HHHHHHHHHHHH---------
Q 019734 135 -GSTLAMVDAGLMYWE--MDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ-------EEAVKLLYQASI--------- 193 (336)
Q Consensus 135 -~~~~a~~~lg~~~~~--~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~-------~~A~~~~~ka~~--------- 193 (336)
..+.++.++|..+.. .+++++|+.+|+++++. ++++++..+|.++.. ++|+..|+++++
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~ 212 (472)
T 4g1t_A 133 IESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLK 212 (472)
T ss_dssp CCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHH
T ss_pred hhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHH
Confidence 256788888866544 46799999999998754 788888888877654 344444444443
Q ss_pred -----------------------------c--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHH
Q 019734 194 -----------------------------A--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTS 240 (336)
Q Consensus 194 -----------------------------~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg 240 (336)
. ..+.++.++|.+|.. .+++++|+..|+++++ +.++.+++++|
T Consensus 213 ~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~lg 288 (472)
T 4g1t_A 213 VLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRR----KDEPDKAIELLKKALEYIPNNAYLHCQIG 288 (472)
T ss_dssp HHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH----cCchHHHHHHHHHHHHhCCChHHHHHHHH
Confidence 2 344555555555555 5566666666666643 34566666666
Q ss_pred HHHHcCC-----------C----CcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcHH-
Q 019734 241 LCYSFGE-----------G----LPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETA- 302 (336)
Q Consensus 241 ~~~~~~~-----------g----~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~- 302 (336)
.+|.... + ....+++|+.+|++++.. ....+++++|.+|...|++++|..+|++++......
T Consensus 289 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 289 CCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 6654210 0 011245566666666553 334556788888889999999999999999865322
Q ss_pred -H---HHHHHHHHhhcChhcHHHHHHHHHHhhcCCCC
Q 019734 303 -A---DHVKNVILQQLSATSRDRAMLVVDSWRAMPSL 335 (336)
Q Consensus 303 -a---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 335 (336)
. ...++.+. ....++.++|+...++.++..|.
T Consensus 369 ~~~~~~~~~~~~~-~~~~~~~~~Ai~~y~kal~i~~~ 404 (472)
T 4g1t_A 369 AKQLLHLRYGNFQ-LYQMKCEDKAIHHFIEGVKINQK 404 (472)
T ss_dssp HHHHHHHHHHHHH-HHTSSCHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHhcCcc
Confidence 2 22333332 23456788999999988888775
No 54
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.75 E-value=7.8e-17 Score=152.43 Aligned_cols=195 Identities=15% Similarity=0.042 Sum_probs=163.7
Q ss_pred CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHH
Q 019734 119 KNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKK-EAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLY 189 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~-~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ 189 (336)
+.+++++..++.+... .++.+++.+|.++...|++ ++|+.+|+++++. +++.+++.||.+|.. ++|+.+|+
T Consensus 82 ~~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~ 161 (474)
T 4abn_A 82 EEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFS 161 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3477788888876655 4799999999999999999 9999999999865 789999999999998 99999999
Q ss_pred HHHHcC-CHHHHHHHHHHHhc-CCCCc----cCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcC-----CCCcccHHHH
Q 019734 190 QASIAG-HVRAQYQLALCLHR-GRGVD----FNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFG-----EGLPLSHRQA 256 (336)
Q Consensus 190 ka~~~~-~~~a~~~lg~~~~~-g~g~~----~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~-----~g~~~~~~~A 256 (336)
++++.. +..+++++|.+|.. +.+.. +++++|+.+|+++++ +.++.+++++|.+|... . ..+++++|
T Consensus 162 ~al~~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~-~~g~~~~A 240 (474)
T 4abn_A 162 GALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQ-NPKISQQA 240 (474)
T ss_dssp HHHTTCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTC-CHHHHHHH
T ss_pred HHHhhCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhcc-ccchHHHH
Confidence 999863 47999999999998 11111 899999999999965 57899999999999652 1 11489999
Q ss_pred HHHHHHHHHc-----CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC--cHHHHHHHHHHHhhc
Q 019734 257 RKWMKRAADC-----GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG--ETAADHVKNVILQQL 314 (336)
Q Consensus 257 ~~~~~~a~~~-----~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~--~~~a~~~~~~~~~~~ 314 (336)
+.+|++++.. +++.+++++|.+|...|++++|..+|+++++.. +..+...++.++..+
T Consensus 241 ~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~l 305 (474)
T 4abn_A 241 LSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFL 305 (474)
T ss_dssp HHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 9999999984 578899999999999999999999999999864 556666666655544
No 55
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.74 E-value=1e-15 Score=129.77 Aligned_cols=196 Identities=14% Similarity=0.137 Sum_probs=155.0
Q ss_pred CCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc---CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHH
Q 019734 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR---GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQF 173 (336)
Q Consensus 99 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~---~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~ 173 (336)
.++.+++.+|.++.. .+++++|+.+|++++.. .+..+++.+|.++...|++++|+.+|+++++. +++.+++
T Consensus 5 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 80 (228)
T 4i17_A 5 TDPNQLKNEGNDALN----AKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYI 80 (228)
T ss_dssp CCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHH
T ss_pred cCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHH
Confidence 367889999999988 68999999999999875 46788888999999999999999999999865 5788899
Q ss_pred HHHHHHHH----HHHHHHHHHHHHc--CCH-------HHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--C--CHHHH
Q 019734 174 NLGISYLQ----EEAVKLLYQASIA--GHV-------RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--G--YVRAM 236 (336)
Q Consensus 174 ~Lg~~~~~----~~A~~~~~ka~~~--~~~-------~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~--~~~a~ 236 (336)
.+|.+|.. ++|+.+|+++++. +++ .+++++|.++.. .+++++|+.+|+++++. . ++.++
T Consensus 81 ~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~ 156 (228)
T 4i17_A 81 GKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQ----AGNIEKAEENYKHATDVTSKKWKTDAL 156 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHH----hccHHHHHHHHHHHHhcCCCcccHHHH
Confidence 99999988 8999999999875 455 668999999988 89999999999999765 4 45889
Q ss_pred HHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC--cHHHHHHHHHHH
Q 019734 237 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG--ETAADHVKNVIL 311 (336)
Q Consensus 237 ~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~--~~~a~~~~~~~~ 311 (336)
+++|.+|.. .+...+.++...+........+......+++++|+.+|+++++.. ++++...+..+.
T Consensus 157 ~~l~~~~~~---------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~ 224 (228)
T 4i17_A 157 YSLGVLFYN---------NGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVK 224 (228)
T ss_dssp HHHHHHHHH---------HHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHH---------HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 999999853 344556666665433333344455556778999999999999875 455555555543
No 56
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.74 E-value=5.1e-16 Score=133.19 Aligned_cols=187 Identities=14% Similarity=0.043 Sum_probs=166.8
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
..+..+..++..|++++|...+.+.++..+. ++.+++.+|.+|.. .+++++|+.+|++++.. .++.+++.+|
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~--~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~la 112 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALEIDPS--SADAHAALAVVFQT----EMEPKLADEEYRKALASDSRNARVLNNYG 112 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcCCC--hHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHCcCcHHHHHHHH
Confidence 3466677778899999999999999988766 78999999999998 68999999999999987 5789999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHH--c--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCc
Q 019734 145 LMYWEMDKKEAAISLYRQAAV--L--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVD 214 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~--~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~ 214 (336)
.++...|++++|+.+|+++++ . .++.+++.+|.++.. ++|+.+|+++++. .++.+++.+|.+|.. .
T Consensus 113 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~ 188 (252)
T 2ho1_A 113 GFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYK----E 188 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH----T
T ss_pred HHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH----c
Confidence 999999999999999999987 3 568899999999988 9999999999875 578999999999998 8
Q ss_pred cCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC
Q 019734 215 FNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267 (336)
Q Consensus 215 ~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~ 267 (336)
+++++|+.+|+++++. .+..++..++.++... +++++|..+++++++..
T Consensus 189 g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~A~~~~~~~~~~~ 239 (252)
T 2ho1_A 189 REYVPARQYYDLFAQGGGQNARSLLLGIRLAKVF----EDRDTAASYGLQLKRLY 239 (252)
T ss_dssp TCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHc----cCHHHHHHHHHHHHHHC
Confidence 9999999999999764 6788999999999753 39999999999998864
No 57
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.73 E-value=2.7e-16 Score=144.05 Aligned_cols=219 Identities=11% Similarity=0.055 Sum_probs=169.4
Q ss_pred HHHhcCCChhHHhhhHHHHHHHHHhCCCC----CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----C-----CH
Q 019734 71 KIAASFTLPQLRAASLVCKSWNDALRPLR----EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----G-----ST 137 (336)
Q Consensus 71 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~-----~~ 137 (336)
.+...+..|++++|...+.+.++.....+ .+.+++.+|.+|.. .+++++|+.+|++|+.. + ..
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 184 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY----MKQTYFSMDYARQAYEIYKEHEAYNIRLL 184 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHTCSTTHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhCccchHHHH
Confidence 66667788999999988888887644332 46789999999998 58999999999999874 2 24
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHHH----HHHHHHHHHHHH--------cCCH
Q 019734 138 LAMVDAGLMYWEMDKKEAAISLYRQAAVL----GD----PAGQFNLGISYLQ----EEAVKLLYQASI--------AGHV 197 (336)
Q Consensus 138 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~~----~~a~~~Lg~~~~~----~~A~~~~~ka~~--------~~~~ 197 (336)
.++..+|.+|...|++++|+.+|+++++. ++ ..++++||.+|.. ++|+.+|+++++ ...+
T Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 264 (383)
T 3ulq_A 185 QCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLP 264 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHH
Confidence 57889999999999999999999999854 33 3578899999988 999999999987 2356
Q ss_pred HHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----CCHH---HHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc-CCH
Q 019734 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----GYVR---AMYNTSLCYSFGEGLPLSHRQARKWMKRAADC-GHG 269 (336)
Q Consensus 198 ~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~~~~---a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~-~~~ 269 (336)
.+++++|.+|.. .+++++|+.+|+++++. +++. .+..+|.+|.... -...+++|+.++++.-.. ...
T Consensus 265 ~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~al~~~~~~~~~~~~~ 339 (383)
T 3ulq_A 265 QAYFLITQIHYK----LGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGP-DEEAIQGFFDFLESKMLYADLE 339 (383)
T ss_dssp HHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSC-CHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCcCHHHHH
Confidence 788999999988 78999999999998653 3332 2466888885432 112377888888776221 224
Q ss_pred HHHHHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 270 KAQLEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 270 ~a~~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
.++..||.+|...|++++|..+|++++..
T Consensus 340 ~~~~~la~~y~~~g~~~~A~~~~~~al~~ 368 (383)
T 3ulq_A 340 DFAIDVAKYYHERKNFQKASAYFLKVEQV 368 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 56788999999999999999999999863
No 58
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.73 E-value=8.1e-16 Score=129.00 Aligned_cols=189 Identities=13% Similarity=0.053 Sum_probs=153.5
Q ss_pred CCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHH
Q 019734 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFN 174 (336)
Q Consensus 99 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~ 174 (336)
.++.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|.++++. .++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 81 (225)
T 2vq2_A 6 QVSNIKTQLAMEYMR----GQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNN 81 (225)
T ss_dssp HHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccHHHHHHHHHHHHH----HhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHH
Confidence 368889999999988 58999999999999886 57889999999999999999999999999865 57888888
Q ss_pred HHHHHHH-----HHHHHHHHHHHH--c--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHH
Q 019734 175 LGISYLQ-----EEAVKLLYQASI--A--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCY 243 (336)
Q Consensus 175 Lg~~~~~-----~~A~~~~~ka~~--~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~ 243 (336)
+|.++.. ++|+.+|+++++ . ....+++.+|.++.. .+++++|+.+|+++++ +.+..+++.+|.++
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 157 (225)
T 2vq2_A 82 YGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAK----QGQFGLAEAYLKRSLAAQPQFPPAFKELARTK 157 (225)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCchHHHHHHHHH
Confidence 8888865 788888888877 2 236788888888887 7888888888888865 35688888888888
Q ss_pred HcCCCCcccHHHHHHHHHHHHHc---CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 244 SFGEGLPLSHRQARKWMKRAADC---GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 244 ~~~~g~~~~~~~A~~~~~~a~~~---~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
.. .+++++|+.++++++.. .++..+..++.++...|+.++|..+++.+....
T Consensus 158 ~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 212 (225)
T 2vq2_A 158 ML----AGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANF 212 (225)
T ss_dssp HH----HTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HH----cCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhC
Confidence 65 33888888888888763 556777777777788888888888888877543
No 59
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.72 E-value=3e-15 Score=125.51 Aligned_cols=182 Identities=13% Similarity=0.029 Sum_probs=93.5
Q ss_pred HHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHH
Q 019734 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLM 146 (336)
Q Consensus 69 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~ 146 (336)
...+...+..|++++|...+.+.++..+. ++.+++.+|.+|.. .+++++|+.+|++++.. .++.+++.+|.+
T Consensus 12 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 85 (225)
T 2vq2_A 12 TQLAMEYMRGQDYRQATASIEDALKSDPK--NELAWLVRAEIYQY----LKVNDKAQESFRQALSIKPDSAEINNNYGWF 85 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCcc--chHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 33444444555555555555555555443 45555555555555 35555555555555543 245555555555
Q ss_pred HhcC-CCHHHHHHHHHHHHH--c--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCcc
Q 019734 147 YWEM-DKKEAAISLYRQAAV--L--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDF 215 (336)
Q Consensus 147 ~~~~-~~~~~A~~~~~~a~~--~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~ 215 (336)
+... |++++|+.+|+++++ . .++.+++.+|.++.. ++|+.+|+++++. .++.+++.+|.++.. .+
T Consensus 86 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~ 161 (225)
T 2vq2_A 86 LCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKML----AG 161 (225)
T ss_dssp HHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----HT
T ss_pred HHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH----cC
Confidence 5555 555555555555554 1 224555555555554 5555555555443 345555555555554 45
Q ss_pred CHHHHHHHHHHHHH--C-CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHH
Q 019734 216 NLQEAARWYLRAAE--G-GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 264 (336)
Q Consensus 216 ~~~~A~~~~~~a~~--~-~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~ 264 (336)
++++|+.+|++++. + .+..++..++.++.... +.++|..+++.+.
T Consensus 162 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~a~~~~~~~~ 209 (225)
T 2vq2_A 162 QLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALG----NAQAAYEYEAQLQ 209 (225)
T ss_dssp CHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC----cHHHHHHHHHHHH
Confidence 55555555555532 3 44444444444443321 5555555555544
No 60
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.71 E-value=1.2e-15 Score=134.93 Aligned_cols=215 Identities=15% Similarity=0.054 Sum_probs=175.0
Q ss_pred HHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----CCHHHHHHHH
Q 019734 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----GSTLAMVDAG 144 (336)
Q Consensus 69 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~~~~a~~~lg 144 (336)
+..+...+..|++++|+..++. . +.+...++..++..+.. .++.++|+..|++.+.. +++.+++.+|
T Consensus 38 ~~l~r~yi~~g~~~~al~~~~~----~-~~~~~~a~~~la~~~~~----~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la 108 (291)
T 3mkr_A 38 VFLYRAYLAQRKYGVVLDEIKP----S-SAPELQAVRMFAEYLAS----HSRRDAIVAELDREMSRSVDVTNTTFLLMAA 108 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHSCT----T-SCHHHHHHHHHHHHHHC----STTHHHHHHHHHHHHHSCCCCSCHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHhcc----c-CChhHHHHHHHHHHHcC----CCcHHHHHHHHHHHHhcccCCCCHHHHHHHH
Confidence 3345566788899988654432 2 33467788888888887 58999999999998864 4789999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHHHHHHHHHHHcCCHHHHHHHHH----HHhcCCCCccC
Q 019734 145 LMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ----EEAVKLLYQASIAGHVRAQYQLAL----CLHRGRGVDFN 216 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~~~~~a~~~lg~----~~~~g~g~~~~ 216 (336)
.++...|++++|+.+|++ .++++++..+|.+|.. ++|+..|+++++........+++. ++.. .++
T Consensus 109 ~~~~~~g~~~~Al~~l~~---~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~----~~~ 181 (291)
T 3mkr_A 109 SIYFYDQNPDAALRTLHQ---GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAG----GEK 181 (291)
T ss_dssp HHHHHTTCHHHHHHHHTT---CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC----TTH
T ss_pred HHHHHCCCHHHHHHHHhC---CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhC----chH
Confidence 999999999999999999 7899999999999998 999999999987653333334432 2322 478
Q ss_pred HHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHH-HHHH
Q 019734 217 LQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMK-AVVY 291 (336)
Q Consensus 217 ~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~-A~~~ 291 (336)
+++|+..|+++++ +.++.+++++|.++.... ++++|...|++++.. +++.+++++|.++...|+..+ +..+
T Consensus 182 ~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g----~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~ 257 (291)
T 3mkr_A 182 LQDAYYIFQEMADKCSPTLLLLNGQAACHMAQG----RWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRY 257 (291)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999976 578999999999997633 999999999999985 779999999999999999876 5689
Q ss_pred HHHHHHcCcHHH
Q 019734 292 LELATRAGETAA 303 (336)
Q Consensus 292 ~~~A~~~~~~~a 303 (336)
++++++..+.++
T Consensus 258 ~~~~~~~~P~~~ 269 (291)
T 3mkr_A 258 LSQLKDAHRSHP 269 (291)
T ss_dssp HHHHHHHCTTCH
T ss_pred HHHHHHhCCCCh
Confidence 999998765443
No 61
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.71 E-value=5e-16 Score=143.03 Aligned_cols=223 Identities=20% Similarity=0.160 Sum_probs=184.1
Q ss_pred HHHHHHhcCCChhHHhhhHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----C----
Q 019734 68 VLNKIAASFTLPQLRAASLVCKSWNDALRPL----REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----G---- 135 (336)
Q Consensus 68 ~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~---- 135 (336)
....+..++..|++++|...+.+.++..... ..+.+++.+|.+|.. .+++++|+.+|++++.. +
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~ 164 (411)
T 4a1s_A 89 YSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKV----MGRFDEAAICCERHLTLARQLGDRLS 164 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHhhchHH
Confidence 3455556667899999999998888764221 256789999999998 68999999999999875 2
Q ss_pred CHHHHHHHHHHHhcCCC-----------------HHHHHHHHHHHHHc----C----CHHHHHHHHHHHHH----HHHHH
Q 019734 136 STLAMVDAGLMYWEMDK-----------------KEAAISLYRQAAVL----G----DPAGQFNLGISYLQ----EEAVK 186 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~-----------------~~~A~~~~~~a~~~----~----~~~a~~~Lg~~~~~----~~A~~ 186 (336)
...++..+|.+|...|+ +++|+.+|.++++. + ...++.++|.+|.. ++|+.
T Consensus 165 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 244 (411)
T 4a1s_A 165 EGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIE 244 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 35688999999999999 99999999998753 2 34688999999998 99999
Q ss_pred HHHHHHHc----CC----HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCCCCc
Q 019734 187 LLYQASIA----GH----VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----GY----VRAMYNTSLCYSFGEGLP 250 (336)
Q Consensus 187 ~~~ka~~~----~~----~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~g~~ 250 (336)
+|+++++. ++ ..+++++|.+|.. .+++++|+.+|+++++. ++ ..++..+|.+|...
T Consensus 245 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~---- 316 (411)
T 4a1s_A 245 HHQERLRIAREFGDRAAERRANSNLGNSHIF----LGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLL---- 316 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----CcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc----
Confidence 99999764 23 3488999999998 89999999999999754 22 67889999999753
Q ss_pred ccHHHHHHHHHHHHHc----CC----HHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcHH
Q 019734 251 LSHRQARKWMKRAADC----GH----GKAQLEHGLGLFTEGEMMKAVVYLELATRAGETA 302 (336)
Q Consensus 251 ~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~ 302 (336)
+++++|+.+|++++.. ++ ..++..+|.+|...|++++|..+|+++++.....
T Consensus 317 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 376 (411)
T 4a1s_A 317 HEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAXXX 376 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhc
Confidence 3999999999999874 22 4578999999999999999999999999876543
No 62
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.70 E-value=2.3e-15 Score=137.81 Aligned_cols=221 Identities=11% Similarity=0.058 Sum_probs=173.5
Q ss_pred HHHHHhcCCChhHHhhhHHHHHHHHHhCCCC----CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----C-----
Q 019734 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLR----EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----G----- 135 (336)
Q Consensus 69 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~----- 135 (336)
+..+...+..|++.+|+..+.+.++.....+ .+.+++.+|.+|.. .+++++|+.+|++|+.. +
T Consensus 105 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~----~~~~~~A~~~~~~al~~~~~~~~~~~~ 180 (378)
T 3q15_A 105 FFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYH----MKQTHVSMYHILQALDIYQNHPLYSIR 180 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHTSTTCHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHH----cCCcHHHHHHHHHHHHHHHhCCCchhh
Confidence 3455556788999999988888887655433 46789999999998 68999999999999864 2
Q ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHHH----HHHHHHHHHHHH-----c--CC
Q 019734 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVL----GD----PAGQFNLGISYLQ----EEAVKLLYQASI-----A--GH 196 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~~----~~a~~~Lg~~~~~----~~A~~~~~ka~~-----~--~~ 196 (336)
...+++.+|.+|...|++++|+.+|.++++. ++ ..++++||.+|.. ++|+.+|+++++ . ..
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 260 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL 260 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH
Confidence 2457889999999999999999999999864 33 4678999999988 999999999987 3 24
Q ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----C---CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc-CC
Q 019734 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----G---YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC-GH 268 (336)
Q Consensus 197 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~---~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~-~~ 268 (336)
+.+++++|.+|.. .+++++|+.+|+++++. + .......++.+|.. .+....+.+|+.++++.-.. ..
T Consensus 261 ~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~-~~~~~~~~~al~~~~~~~~~~~~ 335 (378)
T 3q15_A 261 PKVLFGLSWTLCK----AGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKE-TVDERKIHDLLSYFEKKNLHAYI 335 (378)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSS-SCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHhCCChhHH
Confidence 7889999999998 89999999999999763 1 23445667777743 32123388888888873211 22
Q ss_pred HHHHHHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 269 GKAQLEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 269 ~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
......||.+|...|++++|..+|+++++.
T Consensus 336 ~~~~~~la~~y~~~g~~~~A~~~~~~al~~ 365 (378)
T 3q15_A 336 EACARSAAAVFESSCHFEQAAAFYRKVLKA 365 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 456689999999999999999999999874
No 63
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.70 E-value=2.4e-15 Score=137.77 Aligned_cols=216 Identities=13% Similarity=0.073 Sum_probs=169.8
Q ss_pred HHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----C----CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----C---
Q 019734 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----G----STLAMVDAGLMYWEMDKKEAAISLYRQAAVL----G--- 167 (336)
Q Consensus 103 a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~----~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~--- 167 (336)
.++.+|.++.. .+++++|+.+|++|+.. + .+.+++.+|.+|...|++++|+.+|.+|++. +
T Consensus 105 ~~~~~g~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 180 (383)
T 3ulq_A 105 FNFFRGMYELD----QREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYN 180 (383)
T ss_dssp HHHHHHHHHHH----TTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTH
T ss_pred HHHHHHHHHHH----hcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccch
Confidence 34558999888 68999999999999875 3 3578999999999999999999999999854 2
Q ss_pred --CHHHHHHHHHHHHH----HHHHHHHHHHHHc----CC----HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH----
Q 019734 168 --DPAGQFNLGISYLQ----EEAVKLLYQASIA----GH----VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE---- 229 (336)
Q Consensus 168 --~~~a~~~Lg~~~~~----~~A~~~~~ka~~~----~~----~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~---- 229 (336)
.+.+++++|.+|.. ++|+.+|+++++. ++ ..+++++|.+|.. .+++++|+.+|+++++
T Consensus 181 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 181 IRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNS----QSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHh
Confidence 24688999999998 9999999999864 32 3589999999998 8999999999999987
Q ss_pred ----CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc----CCHH---HHHHHHHHhhccCC---HHHHHHHHHHH
Q 019734 230 ----GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC----GHGK---AQLEHGLGLFTEGE---MMKAVVYLELA 295 (336)
Q Consensus 230 ----~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~----~~~~---a~~~lg~~~~~~~~---~~~A~~~~~~A 295 (336)
.....+++++|.+|... +++++|..++++++.. +++. ....||.+|...|+ +++|+.++++.
T Consensus 257 ~~~~~~~~~~~~~l~~~~~~~----g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~ 332 (383)
T 3ulq_A 257 SNILPSLPQAYFLITQIHYKL----GKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESK 332 (383)
T ss_dssp TTCGGGHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHT
T ss_pred hccchhHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence 34578899999999763 3999999999999874 3432 24679999999999 88888888877
Q ss_pred HHcCcHHHHHHHHHHHhhcChhcHHHHHHHHHHhhc
Q 019734 296 TRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 331 (336)
Q Consensus 296 ~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 331 (336)
- ..+..+.............++.++|....++...
T Consensus 333 ~-~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~ 367 (383)
T 3ulq_A 333 M-LYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQ 367 (383)
T ss_dssp T-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred c-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 2 1122222333333334455677888877776553
No 64
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.68 E-value=1.8e-15 Score=133.30 Aligned_cols=227 Identities=15% Similarity=0.081 Sum_probs=167.5
Q ss_pred hHHHHHHHHhcCCChhHHhhhHHHHHHHHHhC------CCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----
Q 019734 65 PFDVLNKIAASFTLPQLRAASLVCKSWNDALR------PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR---- 134 (336)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~------~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~---- 134 (336)
.......+..++..|++++|...+.+.++... ....+.+++.+|.+|.. .+++++|+.+|++++..
T Consensus 27 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~ 102 (311)
T 3nf1_A 27 LRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD----QNKYKDAANLLNDALAIREKT 102 (311)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHH
Confidence 34456677777899999999999999998632 22367889999999998 58999999999999875
Q ss_pred --C----CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHH----HHHHHHHHHHHHc
Q 019734 135 --G----STLAMVDAGLMYWEMDKKEAAISLYRQAAVL----------GDPAGQFNLGISYLQ----EEAVKLLYQASIA 194 (336)
Q Consensus 135 --~----~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----------~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~ 194 (336)
+ ...+++.+|.+|...|++++|+.+|+++++. ....+++.+|.++.. ++|+.+|+++++.
T Consensus 103 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 103 LGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 1 3567889999999999999999999999864 235678889999987 9999999999775
Q ss_pred --------C--CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHcC--CCCcc
Q 019734 195 --------G--HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG-----------YVRAMYNTSLCYSFG--EGLPL 251 (336)
Q Consensus 195 --------~--~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~-----------~~~a~~~lg~~~~~~--~g~~~ 251 (336)
. ...+++.+|.+|.. .+++++|+.+|+++++.. ....+..++.++..+ .....
T Consensus 183 ~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (311)
T 3nf1_A 183 YQTKLGPDDPNVAKTKNNLASCYLK----QGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGT 258 (311)
T ss_dssp HHHTSCTTCHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------C
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHH
Confidence 2 34678999999988 899999999999987531 122233333333322 11233
Q ss_pred cHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 252 SHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
.+.++..+++++... ....++.++|.+|...|++++|..+|+++++..
T Consensus 259 ~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 259 SFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp CSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 666777788887764 346678999999999999999999999998753
No 65
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.68 E-value=6.4e-15 Score=127.65 Aligned_cols=209 Identities=13% Similarity=-0.023 Sum_probs=171.0
Q ss_pred cCCHHHHHHHHHHHHHc------CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHH
Q 019734 118 RKNLDKALDSFLKGAAR------GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAV 185 (336)
Q Consensus 118 ~~~~~~A~~~~~~A~~~------~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~ 185 (336)
.+++++|+.+|+++++. .++.+++.+|.++...|++++|+.+|+++++. .++.+++.+|.+|.. ++|+
T Consensus 18 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~ 97 (275)
T 1xnf_A 18 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAY 97 (275)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHH
Confidence 57999999999999986 25788999999999999999999999999865 689999999999998 9999
Q ss_pred HHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHHH
Q 019734 186 KLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261 (336)
Q Consensus 186 ~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~ 261 (336)
.+|+++++. +++.+++.+|.+|.. .+++++|+.+|+++++. .+......++.++. .+++++|+.+++
T Consensus 98 ~~~~~al~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~~~~A~~~~~ 168 (275)
T 1xnf_A 98 EAFDSVLELDPTYNYAHLNRGIALYY----GGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQ-----KLDEKQAKEVLK 168 (275)
T ss_dssp HHHHHHHHHCTTCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-----HHCHHHHHHHHH
T ss_pred HHHHHHHhcCccccHHHHHHHHHHHH----hccHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-----hcCHHHHHHHHH
Confidence 999999885 578999999999998 89999999999999764 56666666665543 248999999999
Q ss_pred HHHHcCC-HHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcH----HHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCCC
Q 019734 262 RAADCGH-GKAQLEHGLGLFTEGEMMKAVVYLELATRAGET----AADHVKNVILQQLSATSRDRAMLVVDSWRAMPSL 335 (336)
Q Consensus 262 ~a~~~~~-~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~----~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 335 (336)
+++...+ ....+.++.++...++.++|+..+++++...+. .+.............++.++|....++.....|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 247 (275)
T 1xnf_A 169 QHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVH 247 (275)
T ss_dssp HHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCT
T ss_pred HHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCch
Confidence 9987522 222356777788899999999999999876542 1333333444444567899999999999988874
No 66
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.67 E-value=3.3e-15 Score=136.64 Aligned_cols=220 Identities=18% Similarity=0.126 Sum_probs=175.7
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC--C----HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----C--
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG--S----TLAMVDAGLMYWEMDKKEAAISLYRQAAVL----G-- 167 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~--~----~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~-- 167 (336)
...+++.+|.++.. .+++++|+.+|++++... + ..+++.+|.++...|++++|+.+|+++++. +
T Consensus 8 ~~~~l~~~g~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 83 (406)
T 3sf4_A 8 SCLELALEGERLCK----SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQ 83 (406)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHH----hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcccc
Confidence 57788999999999 689999999999999873 4 467899999999999999999999998754 2
Q ss_pred --CHHHHHHHHHHHHH----HHHHHHHHHHHHc----CC----HHHHHHHHHHHhcCCCCccC-----------------
Q 019734 168 --DPAGQFNLGISYLQ----EEAVKLLYQASIA----GH----VRAQYQLALCLHRGRGVDFN----------------- 216 (336)
Q Consensus 168 --~~~a~~~Lg~~~~~----~~A~~~~~ka~~~----~~----~~a~~~lg~~~~~g~g~~~~----------------- 216 (336)
.+.+++.+|.+|.. ++|+.+|+++++. ++ ..++.++|.+|.. .++
T Consensus 84 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~~~~~~~~~~~~~~a 159 (406)
T 3sf4_A 84 LGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHA----KGKSFGCPGPQDVGEFPEEV 159 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HHHTCC-------CCCCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH----cCCcccccccchhhhhhhhH
Confidence 35688999999988 9999999999764 33 5589999999988 788
Q ss_pred ---HHHHHHHHHHHHHC----C----CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc----CC----HHHHHHHHH
Q 019734 217 ---LQEAARWYLRAAEG----G----YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC----GH----GKAQLEHGL 277 (336)
Q Consensus 217 ---~~~A~~~~~~a~~~----~----~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~ 277 (336)
+++|+.+|++++.. + ...++.++|.+|.. .+++++|+.+|++++.. ++ ..++.++|.
T Consensus 160 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 235 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYL----LGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGN 235 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 99999999998643 2 35678999999975 34999999999999873 22 237799999
Q ss_pred HhhccCCHHHHHHHHHHHHHcC----cH--HHHHHHHHHHhhcChhcHHHHHHHHHHhhc
Q 019734 278 GLFTEGEMMKAVVYLELATRAG----ET--AADHVKNVILQQLSATSRDRAMLVVDSWRA 331 (336)
Q Consensus 278 ~~~~~~~~~~A~~~~~~A~~~~----~~--~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 331 (336)
+|...|++++|..+|++++... +. .+.............++.++|...+++...
T Consensus 236 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 295 (406)
T 3sf4_A 236 AYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 295 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999999999999999998642 21 133333333344455677778777766543
No 67
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.66 E-value=9.9e-14 Score=123.41 Aligned_cols=211 Identities=10% Similarity=-0.016 Sum_probs=173.5
Q ss_pred HhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCC---CCcCC-------HHHHHHHHHHHHH-c--CCHHHHHHHHHHHh
Q 019734 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGR---GVRKN-------LDKALDSFLKGAA-R--GSTLAMVDAGLMYW 148 (336)
Q Consensus 82 ~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~---g~~~~-------~~~A~~~~~~A~~-~--~~~~a~~~lg~~~~ 148 (336)
.+|...+.+.++..|. ++.+|+.+|.++.... ...++ .++|+..|++|+. . ++..++..+|.++.
T Consensus 33 ~~a~~~~~~al~~~p~--~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~ 110 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGH--HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEE 110 (308)
T ss_dssp HHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 5788888899998877 8999999999886300 00145 4999999999998 4 57889999999999
Q ss_pred cCCCHHHHHHHHHHHHHc--CCHH-HHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHH
Q 019734 149 EMDKKEAAISLYRQAAVL--GDPA-GQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQE 219 (336)
Q Consensus 149 ~~~~~~~A~~~~~~a~~~--~~~~-a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~ 219 (336)
..|++++|+..|+++++. +++. ++..+|.++.. ++|+..|++|++. ....++...+.+... ..+++++
T Consensus 111 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~---~~~~~~~ 187 (308)
T 2ond_A 111 SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY---CSKDKSV 187 (308)
T ss_dssp HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHH---TSCCHHH
T ss_pred hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH---HcCCHHH
Confidence 999999999999999976 4566 89999999877 9999999999975 355666666655332 1489999
Q ss_pred HHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc------CCHHHHHHHHHHhhccCCHHHHHHH
Q 019734 220 AARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC------GHGKAQLEHGLGLFTEGEMMKAVVY 291 (336)
Q Consensus 220 A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~------~~~~a~~~lg~~~~~~~~~~~A~~~ 291 (336)
|+..|+++++ +.++..+..++.++.. .| ++++|+..|++++.. .....+..++..+...|++++|...
T Consensus 188 A~~~~~~al~~~p~~~~~~~~~~~~~~~-~g---~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~ 263 (308)
T 2ond_A 188 AFKIFELGLKKYGDIPEYVLAYIDYLSH-LN---EDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKV 263 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT-TC---CHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHH-CC---CHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 9999999965 6889999999999865 33 999999999999984 2455778888888899999999999
Q ss_pred HHHHHHcCcH
Q 019734 292 LELATRAGET 301 (336)
Q Consensus 292 ~~~A~~~~~~ 301 (336)
+++++...+.
T Consensus 264 ~~~a~~~~p~ 273 (308)
T 2ond_A 264 EKRRFTAFRE 273 (308)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHccc
Confidence 9999987654
No 68
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.65 E-value=3.6e-15 Score=125.17 Aligned_cols=153 Identities=15% Similarity=0.092 Sum_probs=80.8
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHH----------------HHHHHhcCCCCcCCHHHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLR----------------WGKRFKHGRGVRKNLDKALDSFLK 130 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~----------------lg~~~~~g~g~~~~~~~A~~~~~~ 130 (336)
..+.++..++..|++++|+..+.+.++..|+ ++.+++. +|.+|.. .+++++|+.+|++
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~ 79 (208)
T 3urz_A 6 EMLQKVSAAIEAGQNGQAVSYFRQTIALNID--RTEMYYWTNVDKNSEISSKLATELALAYKK----NRNYDKAYLFYKE 79 (208)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH--HHHHHHHHHSCTTSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC--ChHHHHHhhhcchhhhhHHHHHHHHHHHHH----CCCHHHHHHHHHH
Confidence 4455555666666666666666666665554 5555555 5555555 3556666666666
Q ss_pred HHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH------HHHHHHHHHHHHcCC-HHH
Q 019734 131 GAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ------EEAVKLLYQASIAGH-VRA 199 (336)
Q Consensus 131 A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~------~~A~~~~~ka~~~~~-~~a 199 (336)
+++. +++.+++.+|.+|...|++++|+.+|+++++. +++.++++||.+|.. ..+...|+++..... ..+
T Consensus 80 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 159 (208)
T 3urz_A 80 LLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYA 159 (208)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHH
Confidence 5554 35555566666665556666666666655432 455555555555533 333444444433221 123
Q ss_pred HHHHHHHHhcCCCCccCHHHHHHHHHHHHH
Q 019734 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAE 229 (336)
Q Consensus 200 ~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~ 229 (336)
++++|.++.. .+++++|+.+|+++++
T Consensus 160 ~~~~g~~~~~----~~~~~~A~~~~~~al~ 185 (208)
T 3urz_A 160 RYRDGLSKLF----TTRYEKARNSLQKVIL 185 (208)
T ss_dssp HHHHHHHHHH----HHTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH----ccCHHHHHHHHHHHHH
Confidence 4445554444 4455555555555543
No 69
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.65 E-value=4.9e-14 Score=125.41 Aligned_cols=207 Identities=10% Similarity=-0.035 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHHhc-------CCCH-------HHHHHHHHHHHH-c--CCHHHHHHHHHHHHH-
Q 019734 122 DKALDSFLKGAAR--GSTLAMVDAGLMYWE-------MDKK-------EAAISLYRQAAV-L--GDPAGQFNLGISYLQ- 181 (336)
Q Consensus 122 ~~A~~~~~~A~~~--~~~~a~~~lg~~~~~-------~~~~-------~~A~~~~~~a~~-~--~~~~a~~~Lg~~~~~- 181 (336)
++|+..|++|+.. .++++|+.+|.++.. .|++ ++|+..|++|++ . +++.+++.+|.++..
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~ 112 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 112 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 7899999999986 799999999999863 5775 999999999997 3 688999999999987
Q ss_pred ---HHHHHHHHHHHHc--CCHH-HHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccH
Q 019734 182 ---EEAVKLLYQASIA--GHVR-AQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSH 253 (336)
Q Consensus 182 ---~~A~~~~~ka~~~--~~~~-a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~ 253 (336)
++|+..|+++++. .++. ++.++|.++.. .+++++|+..|+++++. .....+...+.+.....| ++
T Consensus 113 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~---~~ 185 (308)
T 2ond_A 113 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR----AEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK---DK 185 (308)
T ss_dssp TCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHH----HHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSC---CH
T ss_pred CCHHHHHHHHHHHHhccccCccHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC---CH
Confidence 9999999999986 3565 99999999987 78999999999999875 455566555555332223 99
Q ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC--cH--HHHHHHHHHHhhcChhcHHHHHHHHH
Q 019734 254 RQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG--ET--AADHVKNVILQQLSATSRDRAMLVVD 327 (336)
Q Consensus 254 ~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~--~~--~a~~~~~~~~~~~~~~~~~~a~~~~~ 327 (336)
++|+..|+++++. +++..+.++|.++...|++++|..+|++++... ++ ........+......++.+.+..+.+
T Consensus 186 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~ 265 (308)
T 2ond_A 186 SVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEK 265 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999999874 778999999999999999999999999999952 22 22222333333334567888889988
Q ss_pred HhhcCCCC
Q 019734 328 SWRAMPSL 335 (336)
Q Consensus 328 ~~~~~~~~ 335 (336)
+..+.+|.
T Consensus 266 ~a~~~~p~ 273 (308)
T 2ond_A 266 RRFTAFRE 273 (308)
T ss_dssp HHHHHTTT
T ss_pred HHHHHccc
Confidence 88887774
No 70
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.64 E-value=1.1e-14 Score=129.14 Aligned_cols=219 Identities=18% Similarity=0.108 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CC----HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----C---
Q 019734 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GS----TLAMVDAGLMYWEMDKKEAAISLYRQAAVL----G--- 167 (336)
Q Consensus 101 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~----~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~--- 167 (336)
...++..|..+.. .+++++|+.+|++++.. ++ ..++..+|.++...|++++|+.+|+++++. +
T Consensus 5 ~~~l~~~g~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 5 CLELALEGERLCK----SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHH----hccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccH
Confidence 4567778999888 68999999999999987 34 467889999999999999999999998754 2
Q ss_pred -CHHHHHHHHHHHHH----HHHHHHHHHHHHc----CC----HHHHHHHHHHHhcCCCCccC------------------
Q 019734 168 -DPAGQFNLGISYLQ----EEAVKLLYQASIA----GH----VRAQYQLALCLHRGRGVDFN------------------ 216 (336)
Q Consensus 168 -~~~a~~~Lg~~~~~----~~A~~~~~ka~~~----~~----~~a~~~lg~~~~~g~g~~~~------------------ 216 (336)
.+.++..+|.++.. ++|+.+|+++++. ++ ..++..+|.+|.. .++
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~a~ 156 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHA----KGKSFGCPGPQDTGEFPEDVR 156 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HHHTSSSSSCC----CCHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH----cCcccccchhhhhhhhhhhHH
Confidence 35688999999988 9999999999764 33 4588999999987 778
Q ss_pred --HHHHHHHHHHHHHC----C----CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc----CC----HHHHHHHHHH
Q 019734 217 --LQEAARWYLRAAEG----G----YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC----GH----GKAQLEHGLG 278 (336)
Q Consensus 217 --~~~A~~~~~~a~~~----~----~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~ 278 (336)
+++|+.+|++++.. + ...++..+|.+|.. .+++++|+.++++++.. ++ ..++.++|.+
T Consensus 157 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~ 232 (338)
T 3ro2_A 157 NALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYL----LGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNA 232 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Confidence 99999999998643 2 35678899999975 33999999999999863 33 2377999999
Q ss_pred hhccCCHHHHHHHHHHHHHcC----cH--HHHHHHHHHHhhcChhcHHHHHHHHHHhhc
Q 019734 279 LFTEGEMMKAVVYLELATRAG----ET--AADHVKNVILQQLSATSRDRAMLVVDSWRA 331 (336)
Q Consensus 279 ~~~~~~~~~A~~~~~~A~~~~----~~--~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 331 (336)
+...|++++|..+|++++... +. .+.............++.++|....++...
T Consensus 233 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 291 (338)
T 3ro2_A 233 YIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 291 (338)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 999999999999999998642 21 123333333334455677777777666543
No 71
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.64 E-value=6.6e-15 Score=130.12 Aligned_cols=145 Identities=16% Similarity=0.117 Sum_probs=76.5
Q ss_pred HHhcCCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHHH----HHHHHHHHHHHHc----CC----HHHHHHHHH
Q 019734 146 MYWEMDKKEAAISLYRQAAVL----GD----PAGQFNLGISYLQ----EEAVKLLYQASIA----GH----VRAQYQLAL 205 (336)
Q Consensus 146 ~~~~~~~~~~A~~~~~~a~~~----~~----~~a~~~Lg~~~~~----~~A~~~~~ka~~~----~~----~~a~~~lg~ 205 (336)
+|...|++++|+.+|.++++. ++ +.++.++|.+|.. ++|+.+|++|++. ++ ..++.++|.
T Consensus 46 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~ 125 (292)
T 1qqe_A 46 IYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGE 125 (292)
T ss_dssp HHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 444455555555555555432 22 2344555555544 5555555555432 22 235556666
Q ss_pred HHhcCCCCc-cCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC--CH-----
Q 019734 206 CLHRGRGVD-FNLQEAARWYLRAAEG----GY----VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG--HG----- 269 (336)
Q Consensus 206 ~~~~g~g~~-~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~--~~----- 269 (336)
+|.. . +++++|+.+|++|++. ++ ..++.++|.+|... +++++|+.+|++++... +.
T Consensus 126 ~~~~----~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~----g~~~~A~~~~~~al~~~~~~~~~~~~ 197 (292)
T 1qqe_A 126 ILEN----DLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALD----GQYIEASDIYSKLIKSSMGNRLSQWS 197 (292)
T ss_dssp HHHH----TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHTTSSCTTTGGG
T ss_pred HHHH----hhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHhcCCcccHH
Confidence 6655 4 5666666666666542 11 34455666666442 26666666666666531 11
Q ss_pred --HHHHHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 270 --KAQLEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 270 --~a~~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
..++++|.++...|++++|+.+|++++..
T Consensus 198 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 228 (292)
T 1qqe_A 198 LKDYFLKKGLCQLAATDAVAAARTLQEGQSE 228 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 13456666666666666666666666654
No 72
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.64 E-value=2.6e-14 Score=121.02 Aligned_cols=198 Identities=13% Similarity=0.085 Sum_probs=158.0
Q ss_pred hHHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHH
Q 019734 65 PFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVD 142 (336)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~ 142 (336)
|...+..+..++..|++.+|+..+.+.++..+. .+..+++.+|.++.. .+++++|+.+|++++.. .++.+++.
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~ 81 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNN-QDSVTAYNCGVCADN----IKKYKEAADYFDIAIKKNYNLANAYIG 81 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT-CCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTTCSHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCC-CCcHHHHHHHHHHHH----hhcHHHHHHHHHHHHHhCcchHHHHHH
Confidence 456788888899999999999999999998762 277899999999999 69999999999999987 47889999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHc--CCH-------HHHHHHHHHHHH----HHHHHHHHHHHHcC----CHHHHHHHHH
Q 019734 143 AGLMYWEMDKKEAAISLYRQAAVL--GDP-------AGQFNLGISYLQ----EEAVKLLYQASIAG----HVRAQYQLAL 205 (336)
Q Consensus 143 lg~~~~~~~~~~~A~~~~~~a~~~--~~~-------~a~~~Lg~~~~~----~~A~~~~~ka~~~~----~~~a~~~lg~ 205 (336)
+|.+|...|++++|+.+|+++++. +++ .+++.+|.++.. ++|+.+|+++++.+ ++.+++++|.
T Consensus 82 l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~ 161 (228)
T 4i17_A 82 KSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGV 161 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHH
Confidence 999999999999999999999875 667 668999999988 99999999998864 4589999999
Q ss_pred HHhcCCCCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhh
Q 019734 206 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLF 280 (336)
Q Consensus 206 ~~~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~ 280 (336)
+|.. .+...++++............+..... .+.+++|+.+|+++++. +++.+...|+.+..
T Consensus 162 ~~~~---------~~~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~~ 225 (228)
T 4i17_A 162 LFYN---------NGADVLRKATPLASSNKEKYASEKAKA----DAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKA 225 (228)
T ss_dssp HHHH---------HHHHHHHHHGGGTTTCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHT
T ss_pred HHHH---------HHHHHHHHHHhcccCCHHHHHHHHHHH----HHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 9864 344555666544322222222222221 33799999999999885 66777777777643
No 73
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.64 E-value=3.2e-15 Score=129.51 Aligned_cols=191 Identities=14% Similarity=0.083 Sum_probs=145.4
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc------C----CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc---
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR------G----STLAMVDAGLMYWEMDKKEAAISLYRQAAVL--- 166 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~------~----~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--- 166 (336)
.+.+++.+|.+|.. .+++++|+.+|++++.. . ...++..+|.+|...|++++|+.+|.++++.
T Consensus 42 ~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 117 (283)
T 3edt_B 42 VATMLNILALVYRD----QNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 117 (283)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----cccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 57899999999999 68999999999999865 1 3568899999999999999999999999854
Q ss_pred -------CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--------C--CHHHHHHHHHHHhcCCCCccCHHHHHHHHH
Q 019734 167 -------GDPAGQFNLGISYLQ----EEAVKLLYQASIA--------G--HVRAQYQLALCLHRGRGVDFNLQEAARWYL 225 (336)
Q Consensus 167 -------~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--------~--~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~ 225 (336)
....+++++|.+|.. ++|+.+|+++++. . ...++.++|.+|.. .+++++|+.+|+
T Consensus 118 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~ 193 (283)
T 3edt_B 118 VLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK----QGKYQDAETLYK 193 (283)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH----HTCHHHHHHHHH
T ss_pred HcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH----cCCHHHHHHHHH
Confidence 235788999999988 9999999999875 2 35688999999998 899999999999
Q ss_pred HHHHC-----------CCHHHHHHHHHHHHcCC--CCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHH
Q 019734 226 RAAEG-----------GYVRAMYNTSLCYSFGE--GLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVV 290 (336)
Q Consensus 226 ~a~~~-----------~~~~a~~~lg~~~~~~~--g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~ 290 (336)
++++. .....+..++.++.... .....+.++..+++..... ....++..||.+|...|++++|..
T Consensus 194 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 273 (283)
T 3edt_B 194 EILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHT 273 (283)
T ss_dssp HHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 99753 23445666666665432 1233455555555444322 235677999999999999999999
Q ss_pred HHHHHHHc
Q 019734 291 YLELATRA 298 (336)
Q Consensus 291 ~~~~A~~~ 298 (336)
+|+++++.
T Consensus 274 ~~~~al~~ 281 (283)
T 3edt_B 274 LEDCASRN 281 (283)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99999874
No 74
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.63 E-value=4e-14 Score=125.11 Aligned_cols=185 Identities=16% Similarity=0.088 Sum_probs=146.2
Q ss_pred HHHHhcCCCCcCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CC----HHH
Q 019734 108 GKRFKHGRGVRKNLDKALDSFLKGAAR----GS----TLAMVDAGLMYWEMDKKEAAISLYRQAAVL----GD----PAG 171 (336)
Q Consensus 108 g~~~~~g~g~~~~~~~A~~~~~~A~~~----~~----~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~~----~~a 171 (336)
|.+|.. .+++++|+.+|++|+.. ++ +.++.++|.+|...|++++|+.+|++|++. ++ +.+
T Consensus 44 ~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~ 119 (292)
T 1qqe_A 44 ATIYRL----RKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANF 119 (292)
T ss_dssp HHHHHH----TTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHH----cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 556665 57999999999999875 33 468899999999999999999999999854 44 457
Q ss_pred HHHHHHHHHH-----HHHHHHHHHHHHc----CC----HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCC--CH---
Q 019734 172 QFNLGISYLQ-----EEAVKLLYQASIA----GH----VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG--YV--- 233 (336)
Q Consensus 172 ~~~Lg~~~~~-----~~A~~~~~ka~~~----~~----~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~--~~--- 233 (336)
+.++|.+|.. ++|+.+|++|++. ++ ..++.++|.+|.. .+++++|+.+|+++++.. +.
T Consensus 120 ~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~ 195 (292)
T 1qqe_A 120 KFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL----DGQYIEASDIYSKLIKSSMGNRLSQ 195 (292)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTTSSCTTTG
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHhcCCccc
Confidence 8999999975 8999999999874 22 4678999999998 899999999999998742 22
Q ss_pred ----HHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCC--HH-----HHHHHHHHhh--ccCCHHHHHHHHHHHHHcCc
Q 019734 234 ----RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH--GK-----AQLEHGLGLF--TEGEMMKAVVYLELATRAGE 300 (336)
Q Consensus 234 ----~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~--~~-----a~~~lg~~~~--~~~~~~~A~~~~~~A~~~~~ 300 (336)
.+++++|.+|... +++++|+.+|++++...+ .. ....|+..+. ..+++++|+..|++++..++
T Consensus 196 ~~~~~~~~~lg~~~~~~----g~~~~A~~~~~~al~l~p~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~l~~ 271 (292)
T 1qqe_A 196 WSLKDYFLKKGLCQLAA----TDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDK 271 (292)
T ss_dssp GGHHHHHHHHHHHHHHT----TCHHHHHHHHHGGGCC---------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSCCCH
T ss_pred HHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCccHH
Confidence 2678999999753 399999999999987532 22 2345666564 46789999999999988776
Q ss_pred HHHH
Q 019734 301 TAAD 304 (336)
Q Consensus 301 ~~a~ 304 (336)
....
T Consensus 272 ~~~~ 275 (292)
T 1qqe_A 272 WKIT 275 (292)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 75
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.63 E-value=4.9e-14 Score=128.93 Aligned_cols=214 Identities=14% Similarity=0.062 Sum_probs=166.9
Q ss_pred HHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----C----CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----C---
Q 019734 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----G----STLAMVDAGLMYWEMDKKEAAISLYRQAAVL----G--- 167 (336)
Q Consensus 103 a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~----~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~--- 167 (336)
.++.+|..+.. .+++++|+.+|++|... + .+.+++.+|.+|...|++++|+.++.+|++. +
T Consensus 103 ~~~~~g~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 178 (378)
T 3q15_A 103 SLFFRGMYEFD----QKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYS 178 (378)
T ss_dssp HHHHHHHHHHH----TTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCH
T ss_pred HHHHHHHHHHH----HCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCch
Confidence 57778998888 68999999999999875 2 3578899999999999999999999999853 2
Q ss_pred --CHHHHHHHHHHHHH----HHHHHHHHHHHHc----C----CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH----
Q 019734 168 --DPAGQFNLGISYLQ----EEAVKLLYQASIA----G----HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE---- 229 (336)
Q Consensus 168 --~~~a~~~Lg~~~~~----~~A~~~~~ka~~~----~----~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~---- 229 (336)
.+.+++++|.+|.. ++|+.+|+++++. + ...++++||.+|.. .+++++|+.+|+++++
T Consensus 179 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~----~~~~~~A~~~~~~al~~~~~ 254 (378)
T 3q15_A 179 IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDR----SGDDQMAVEHFQKAAKVSRE 254 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHh
Confidence 25678899999998 9999999999863 3 24688999999998 8999999999999986
Q ss_pred -C--CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc----CC---HHHHHHHHHHhhccCC---HHHHHHHHHHHH
Q 019734 230 -G--GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC----GH---GKAQLEHGLGLFTEGE---MMKAVVYLELAT 296 (336)
Q Consensus 230 -~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~----~~---~~a~~~lg~~~~~~~~---~~~A~~~~~~A~ 296 (336)
. ....+++++|.+|... +++++|..++++++.. ++ ......|+.+|...++ +.+|+.++++.-
T Consensus 255 ~~~~~~~~~~~~la~~~~~~----g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~~~ 330 (378)
T 3q15_A 255 KVPDLLPKVLFGLSWTLCKA----GQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDLLSYFEKKN 330 (378)
T ss_dssp HCGGGHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHTT
T ss_pred hCChhHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhCC
Confidence 3 3478899999999763 3999999999999984 22 3345788888999998 888888888732
Q ss_pred Hc-CcHHHHHHHHHHHhhcChhcHHHHHHHHHHhh
Q 019734 297 RA-GETAADHVKNVILQQLSATSRDRAMLVVDSWR 330 (336)
Q Consensus 297 ~~-~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~ 330 (336)
.. ........++.+ ....++.++|....++..
T Consensus 331 ~~~~~~~~~~~la~~--y~~~g~~~~A~~~~~~al 363 (378)
T 3q15_A 331 LHAYIEACARSAAAV--FESSCHFEQAAAFYRKVL 363 (378)
T ss_dssp CHHHHHHHHHHHHHH--HHHTTCHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHH--HHHCCCHHHHHHHHHHHH
Confidence 11 112233333333 334566777777666544
No 76
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.63 E-value=9.5e-15 Score=122.55 Aligned_cols=165 Identities=14% Similarity=0.013 Sum_probs=109.1
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC--CHHHHHH----------------HHHHHhcCCCHHHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVD----------------AGLMYWEMDKKEAAISLYR 161 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~----------------lg~~~~~~~~~~~A~~~~~ 161 (336)
.++.++..|..+.. .+++++|+.+|++++... ++.+++. +|.+|...|++++|+.+|+
T Consensus 3 ~~~~~~~~g~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 78 (208)
T 3urz_A 3 SVDEMLQKVSAAIE----AGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYK 78 (208)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 45666667777666 467777777777777653 4556666 6666666666666655555
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHH
Q 019734 162 QAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNT 239 (336)
Q Consensus 162 ~a~~~~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~l 239 (336)
++++. +++++.+++++|.+|.. .+++++|+.+|+++++ ++++.+++++
T Consensus 79 ~al~~--------------------------~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~P~~~~a~~~l 128 (208)
T 3urz_A 79 ELLQK--------------------------APNNVDCLEACAEMQVC----RGQEKDALRMYEKILQLEADNLAANIFL 128 (208)
T ss_dssp HHHHH--------------------------CTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHH--------------------------CCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 55532 12455566666666666 6788888888888754 5678888888
Q ss_pred HHHHHcCCCCcccHHHHHHHHHHHHHcCC-HHHHHHHHHHhhccCCHHHHHHHHHHHHHcCc
Q 019734 240 SLCYSFGEGLPLSHRQARKWMKRAADCGH-GKAQLEHGLGLFTEGEMMKAVVYLELATRAGE 300 (336)
Q Consensus 240 g~~~~~~~g~~~~~~~A~~~~~~a~~~~~-~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~ 300 (336)
|.+|.... ......+...|++++...+ ..+++++|.++...|++++|+.+|++|++..+
T Consensus 129 g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 129 GNYYYLTA--EQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFP 188 (208)
T ss_dssp HHHHHHHH--HHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHh--HHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 88874311 2255667777777765432 23568889888889999999999999998754
No 77
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.60 E-value=3.4e-14 Score=123.00 Aligned_cols=78 Identities=14% Similarity=0.180 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CC---HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-----CC
Q 019734 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GS---TLAMVDAGLMYWEMDKKEAAISLYRQAAVL-----GD 168 (336)
Q Consensus 99 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~---~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-----~~ 168 (336)
.++.+++.+|..+.. .+++++|+.+|++++.. ++ +.+++.+|.+|+..|++++|+..|+++++. ..
T Consensus 13 ~~~~~~~~~a~~~~~----~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~ 88 (261)
T 3qky_A 13 SSPQEAFERAMEFYN----QGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRV 88 (261)
T ss_dssp SSHHHHHHHHHHHHH----TTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH
T ss_pred CCHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchh
Confidence 356666666666666 46677777777766664 24 566666777776667777777776666653 22
Q ss_pred HHHHHHHHHHHH
Q 019734 169 PAGQFNLGISYL 180 (336)
Q Consensus 169 ~~a~~~Lg~~~~ 180 (336)
+.+++.+|.++.
T Consensus 89 ~~a~~~lg~~~~ 100 (261)
T 3qky_A 89 PQAEYERAMCYY 100 (261)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 456666666663
No 78
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.60 E-value=9.1e-15 Score=144.26 Aligned_cols=173 Identities=13% Similarity=0.041 Sum_probs=144.5
Q ss_pred CCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHH--------Hc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH--c
Q 019734 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGA--------AR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAV--L 166 (336)
Q Consensus 99 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~--------~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~ 166 (336)
.++.+.+..| +. .+++++|+..|++++ .. ++..+++.+|.++...|++++|+..|+++++ .
T Consensus 392 ~~~~a~~~~a--~~-----~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p 464 (681)
T 2pzi_A 392 TDVAASVLQA--TV-----LSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVG 464 (681)
T ss_dssp TSTTHHHHHH--TT-----TCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred CCcchHHhhc--cc-----ccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCc
Confidence 4666777666 22 479999999999998 54 5789999999999999999999999999985 4
Q ss_pred CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHH
Q 019734 167 GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYN 238 (336)
Q Consensus 167 ~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~ 238 (336)
+++.+++++|.+|.. ++|+..|+++++. +++.+++++|.+|.. .+++++ +.+|+++++ +++..++++
T Consensus 465 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~----~g~~~~-~~~~~~al~~~P~~~~a~~~ 539 (681)
T 2pzi_A 465 WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL----AGNTDE-HKFYQTVWSTNDGVISAAFG 539 (681)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH----HTCCCT-TCHHHHHHHHCTTCHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----cCChHH-HHHHHHHHHhCCchHHHHHH
Confidence 899999999999998 9999999999875 689999999999998 789999 999999965 578999999
Q ss_pred HHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHH
Q 019734 239 TSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMK 287 (336)
Q Consensus 239 lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~ 287 (336)
+|.+|.... ++++|+.+|+++++. ++..+++++|.++...++.++
T Consensus 540 lg~~~~~~g----~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~~~~~ 586 (681)
T 2pzi_A 540 LARARSAEG----DRVGAVRTLDEVPPTSRHFTTARLTSAVTLLSGRSTSE 586 (681)
T ss_dssp HHHHHHHTT----CHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-------
T ss_pred HHHHHHHcC----CHHHHHHHHHhhcccCcccHHHHHHHHHHHHccCCCCC
Confidence 999997633 999999999999875 457889999999987666333
No 79
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.57 E-value=1.6e-13 Score=120.69 Aligned_cols=223 Identities=16% Similarity=0.091 Sum_probs=163.8
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc-------C---CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc---
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR-------G---STLAMVDAGLMYWEMDKKEAAISLYRQAAVL--- 166 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~-------~---~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--- 166 (336)
.+.+++.+|.+|.. .+++++|+.+|++++.. . ...++..+|.+|...|++++|+.+|+++++.
T Consensus 26 ~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 101 (311)
T 3nf1_A 26 RLRTLHNLVIQYAS----QGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREK 101 (311)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 68899999999998 68999999999999983 2 4578899999999999999999999999854
Q ss_pred -------CCHHHHHHHHHHHHH----HHHHHHHHHHHHc----------CCHHHHHHHHHHHhcCCCCccCHHHHHHHHH
Q 019734 167 -------GDPAGQFNLGISYLQ----EEAVKLLYQASIA----------GHVRAQYQLALCLHRGRGVDFNLQEAARWYL 225 (336)
Q Consensus 167 -------~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~----------~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~ 225 (336)
....+++.+|.+|.. ++|+.+|+++++. ....++.++|.+|.. .+++++|+.+|+
T Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~ 177 (311)
T 3nf1_A 102 TLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQN----QGKYEEVEYYYQ 177 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHH
Confidence 235678889999887 9999999999764 235678899999988 789999999999
Q ss_pred HHHHC----------CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC-----------------CHHHHHHHHHH
Q 019734 226 RAAEG----------GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-----------------HGKAQLEHGLG 278 (336)
Q Consensus 226 ~a~~~----------~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~-----------------~~~a~~~lg~~ 278 (336)
++++. ....++..+|.+|.. .+++++|+.+|++++... .......++..
T Consensus 178 ~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3nf1_A 178 RALEIYQTKLGPDDPNVAKTKNNLASCYLK----QGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGK 253 (311)
T ss_dssp HHHHHHHHTSCTTCHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC---
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCc
Confidence 98764 135578889999875 338999999999998631 11223344444
Q ss_pred hhccCCHHHHHHHHHHHHHcCcHHHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCC
Q 019734 279 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 334 (336)
Q Consensus 279 ~~~~~~~~~A~~~~~~A~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 334 (336)
+...+.+.++..+++++....+..+.............++.++|....++.++..|
T Consensus 254 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~ 309 (311)
T 3nf1_A 254 QKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRK 309 (311)
T ss_dssp ----CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhh
Confidence 55567788888888888887766666666666666667888999998888776554
No 80
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.56 E-value=6.6e-14 Score=138.08 Aligned_cols=165 Identities=14% Similarity=0.051 Sum_probs=141.9
Q ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHH--------H--cCCHHHHHHHHHHHHH----HHHHHHHHHHHH--cCCHH
Q 019734 135 GSTLAMVDAGLMYWEMDKKEAAISLYRQAA--------V--LGDPAGQFNLGISYLQ----EEAVKLLYQASI--AGHVR 198 (336)
Q Consensus 135 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~--------~--~~~~~a~~~Lg~~~~~----~~A~~~~~ka~~--~~~~~ 198 (336)
+++.+.+..| ...+++++|+..|++++ + .+++++++.+|.++.. ++|+..|+++++ .++..
T Consensus 392 ~~~~a~~~~a---~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~ 468 (681)
T 2pzi_A 392 TDVAASVLQA---TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWR 468 (681)
T ss_dssp TSTTHHHHHH---TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHH
T ss_pred CCcchHHhhc---ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHH
Confidence 4566666666 67899999999999998 4 3688999999999998 999999999976 47999
Q ss_pred HHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHH
Q 019734 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLE 274 (336)
Q Consensus 199 a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~ 274 (336)
+++++|.+|.. .+++++|+..|+++++ +++..+++++|.+|... +++++ +.+|+++++. +++.++++
T Consensus 469 a~~~lg~~~~~----~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~----g~~~~-~~~~~~al~~~P~~~~a~~~ 539 (681)
T 2pzi_A 469 LVWYRAVAELL----TGDYDSATKHFTEVLDTFPGELAPKLALAATAELA----GNTDE-HKFYQTVWSTNDGVISAAFG 539 (681)
T ss_dssp HHHHHHHHHHH----HTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHH----TCCCT-TCHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHc----CChHH-HHHHHHHHHhCCchHHHHHH
Confidence 99999999998 8999999999999965 57899999999999763 38888 9999999885 67899999
Q ss_pred HHHHhhccCCHHHHHHHHHHHHHcCcHH--HHHHHHHHH
Q 019734 275 HGLGLFTEGEMMKAVVYLELATRAGETA--ADHVKNVIL 311 (336)
Q Consensus 275 lg~~~~~~~~~~~A~~~~~~A~~~~~~~--a~~~~~~~~ 311 (336)
+|.++...|++++|+.+|+++++.++.. +..+++.++
T Consensus 540 lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 540 LARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 9999999999999999999999886554 444444443
No 81
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.55 E-value=3.8e-13 Score=108.76 Aligned_cols=161 Identities=12% Similarity=0.043 Sum_probs=113.9
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~ 177 (336)
.+..++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|+++++..
T Consensus 7 ~~~~~~~~~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~---------- 72 (186)
T 3as5_A 7 RQVYYRDKGISHAK----AGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADA---------- 72 (186)
T ss_dssp HHHHHHHHHHHHHH----HTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----------
T ss_pred hhHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC----------
Confidence 35667777777776 57778888888777665 467777777777777777777777777776431
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHH
Q 019734 178 SYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQ 255 (336)
Q Consensus 178 ~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~ 255 (336)
..++.+++.+|.++.. .+++++|+.+|++++. +.+..++..+|.++... +++++
T Consensus 73 ----------------~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~----~~~~~ 128 (186)
T 3as5_A 73 ----------------PDNVKVATVLGLTYVQ----VQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNL----GRFDE 128 (186)
T ss_dssp ----------------TTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHH
T ss_pred ----------------CCCHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHc----CcHHH
Confidence 1234444555555555 5677777777777754 35677777777777642 27888
Q ss_pred HHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 256 ARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 256 A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
|+.++++++.. .++.+++.+|.++...|++++|..+|++++..
T Consensus 129 A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 173 (186)
T 3as5_A 129 AIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANEL 173 (186)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 88888888764 45677788888888888888888888888764
No 82
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.55 E-value=3.5e-13 Score=114.23 Aligned_cols=178 Identities=8% Similarity=-0.024 Sum_probs=122.1
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC--C---HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCH---
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG--S---TLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDP--- 169 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~--~---~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~--- 169 (336)
.+.+++.+|..+.. .+++++|+..|++++... + +.+++.+|.+|+..|++++|+..|+++++. +++
T Consensus 3 ~~~~~~~~a~~~~~----~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~ 78 (225)
T 2yhc_A 3 PPNEIYATAQQKLQ----DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNID 78 (225)
T ss_dssp CHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHH
T ss_pred CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHH
Confidence 56789999999988 689999999999999752 2 479999999999999999999999999865 443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHH------------
Q 019734 170 AGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRA------------ 235 (336)
Q Consensus 170 ~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a------------ 235 (336)
.+++.+|.++.. ........+..++..+.. .+++++|+..|+++++. ++..+
T Consensus 79 ~a~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~ 144 (225)
T 2yhc_A 79 YVMYMRGLTNMA----------LDDSALQGFFGVDRSDRD----PQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKD 144 (225)
T ss_dssp HHHHHHHHHHHH----------HHC--------------C----CHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----------hhhhhhhhhhccchhhcC----cHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHH
Confidence 588999999874 011122233445555554 56778888888877653 22222
Q ss_pred -----HHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCH---HHHHHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 236 -----MYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHG---KAQLEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 236 -----~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~---~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
.+.+|.+|.. .+++++|+..|+++++. +++ .+++.+|.+|...|++++|+..++++...+
T Consensus 145 ~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~ 214 (225)
T 2yhc_A 145 RLAKYEYSVAEYYTE----RGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANS 214 (225)
T ss_dssp HHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHH----cCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhC
Confidence 2456666654 33777777777777764 232 567777777777788888777777776654
No 83
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.55 E-value=4e-13 Score=116.26 Aligned_cols=162 Identities=14% Similarity=0.082 Sum_probs=136.8
Q ss_pred cCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CC---HHHHHHHHHHHHH----HHHHHHHHHHHHc-----CCHHH
Q 019734 134 RGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GD---PAGQFNLGISYLQ----EEAVKLLYQASIA-----GHVRA 199 (336)
Q Consensus 134 ~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~---~~a~~~Lg~~~~~----~~A~~~~~ka~~~-----~~~~a 199 (336)
..++.+++.+|..++..|++++|+..|+++++. ++ +.+++.+|.+|.. ++|+.+|+++++. ..+.+
T Consensus 12 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 12 HSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 367899999999999999999999999999976 56 8999999999998 9999999999985 23689
Q ss_pred HHHHHHHHhcCC----CCccCHHHHHHHHHHHHHC--CCHHHH-----------------HHHHHHHHcCCCCcccHHHH
Q 019734 200 QYQLALCLHRGR----GVDFNLQEAARWYLRAAEG--GYVRAM-----------------YNTSLCYSFGEGLPLSHRQA 256 (336)
Q Consensus 200 ~~~lg~~~~~g~----g~~~~~~~A~~~~~~a~~~--~~~~a~-----------------~~lg~~~~~~~g~~~~~~~A 256 (336)
++.+|.++.... ...+++++|+.+|+++++. ++..+. +.+|.+|... +++++|
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~----g~~~~A 167 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERR----ELYEAA 167 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCHHHH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCHHHH
Confidence 999999987410 0158999999999999764 443333 8899999763 399999
Q ss_pred HHHHHHHHHc--C---CHHHHHHHHHHhhcc----------CCHHHHHHHHHHHHHcC
Q 019734 257 RKWMKRAADC--G---HGKAQLEHGLGLFTE----------GEMMKAVVYLELATRAG 299 (336)
Q Consensus 257 ~~~~~~a~~~--~---~~~a~~~lg~~~~~~----------~~~~~A~~~~~~A~~~~ 299 (336)
+.+|++++.. + .+.+++.+|.+|... |++++|+..|+++++..
T Consensus 168 ~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~ 225 (261)
T 3qky_A 168 AVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIF 225 (261)
T ss_dssp HHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHC
Confidence 9999999985 2 356889999999876 89999999999999864
No 84
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.54 E-value=2.2e-14 Score=113.95 Aligned_cols=129 Identities=16% Similarity=0.167 Sum_probs=74.9
Q ss_pred HHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH-
Q 019734 107 WGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ- 181 (336)
Q Consensus 107 lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~- 181 (336)
||.++.. .+++++|+..|++++.. .++.+++.+|.+|+..|++++|+.+|+++++. +++.++++||.+|..
T Consensus 3 LG~~~~~----~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 78 (150)
T 4ga2_A 3 LGSMRRS----KADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELE 78 (150)
T ss_dssp ----CCC----HHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred hHHHHHH----cChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 5666665 57778888888877765 35566777888888888888888887777643 566666666666655
Q ss_pred ---HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHH-HHHHHHH--CCCHHHHHHHHHHH
Q 019734 182 ---EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAAR-WYLRAAE--GGYVRAMYNTSLCY 243 (336)
Q Consensus 182 ---~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~-~~~~a~~--~~~~~a~~~lg~~~ 243 (336)
++|+.+|+++++. +++.+++++|.+|.. .+++++|+. +++++++ ++++.++...+.++
T Consensus 79 ~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll 144 (150)
T 4ga2_A 79 ENTDKAVECYRRSVELNPTQKDLVLKIAELLCK----NDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLL 144 (150)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence 5555555555443 345555555555544 344444333 2344432 34455544444444
No 85
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.54 E-value=8.3e-13 Score=106.76 Aligned_cols=152 Identities=17% Similarity=0.146 Sum_probs=113.9
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
.....+...+..|++++|...+.+.++..+. ++.+++.+|.++.. .+++++|+.+|++++.. .++.++..+|
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 83 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYDADAF--DVDVALHLGIAYVK----TGAVDRGTELLERSLADAPDNVKVATVLG 83 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCCTTSC--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc--ChHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 3456677778999999998777777666554 78999999999998 58999999999999987 5789999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccC
Q 019734 145 LMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFN 216 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~ 216 (336)
.++...|++++|+.+|+++++. +++.+++.+|.++.. ++|+.+|+++++. .++.+++.+|.++.. .++
T Consensus 84 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~ 159 (186)
T 3as5_A 84 LTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ----MGR 159 (186)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTC
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHH----cCC
Confidence 9999999999999999998864 566666776666665 5555555555443 344555555555554 455
Q ss_pred HHHHHHHHHHHH
Q 019734 217 LQEAARWYLRAA 228 (336)
Q Consensus 217 ~~~A~~~~~~a~ 228 (336)
+++|+.+|++++
T Consensus 160 ~~~A~~~~~~~~ 171 (186)
T 3as5_A 160 HEEALPHFKKAN 171 (186)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555553
No 86
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.53 E-value=5.3e-12 Score=114.73 Aligned_cols=248 Identities=13% Similarity=0.033 Sum_probs=173.9
Q ss_pred HHHHHhcCCChhHHhhhHHHHHHHHHhCCCC---CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----CCH----
Q 019734 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLR---EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----GST---- 137 (336)
Q Consensus 69 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~~~---- 137 (336)
+..+...+..|++++|...+.+.++..+... ...++..+|.++.. .+++++|..+|++++.. +++
T Consensus 18 ~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~ 93 (373)
T 1hz4_A 18 ALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHC----KGELTRSLALMQQTEQMARQHDVWHYAL 93 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 3444455678899999888888887765421 12367888888887 58999999999998864 333
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHc----C------CHHHHHHHHHHHHH----HHHHHHHHHHHHcC-------C
Q 019734 138 LAMVDAGLMYWEMDKKEAAISLYRQAAVL----G------DPAGQFNLGISYLQ----EEAVKLLYQASIAG-------H 196 (336)
Q Consensus 138 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~------~~~a~~~Lg~~~~~----~~A~~~~~ka~~~~-------~ 196 (336)
.++..+|.++...|++++|+.+|+++++. + ...++.++|.++.. ++|..+++++++.. .
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 173 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQ 173 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHH
Confidence 44678999999999999999999998753 1 23566788988887 99999999998642 2
Q ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----CCHHHHH-----HHHHHHHcCCCCcccHHHHHHHHHHHHHcC
Q 019734 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----GYVRAMY-----NTSLCYSFGEGLPLSHRQARKWMKRAADCG 267 (336)
Q Consensus 197 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~~~~a~~-----~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~ 267 (336)
..++..+|.++.. .+++++|..+++++... ++...+. .++.++.. .| ++++|..++++++...
T Consensus 174 ~~~~~~la~~~~~----~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g---~~~~A~~~~~~a~~~~ 245 (373)
T 1hz4_A 174 LQCLAMLIQCSLA----RGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQM-TG---DKAAAANWLRHTAKPE 245 (373)
T ss_dssp HHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH-TT---CHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHH-CC---CHHHHHHHHHhCCCCC
Confidence 4678889999887 78999999999988643 2211111 23333433 23 8999999999987643
Q ss_pred C------HHHHHHHHHHhhccCCHHHHHHHHHHHHHc----CcH----HHHHHHHHHHhhcChhcHHHHHHHHHHhh
Q 019734 268 H------GKAQLEHGLGLFTEGEMMKAVVYLELATRA----GET----AADHVKNVILQQLSATSRDRAMLVVDSWR 330 (336)
Q Consensus 268 ~------~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~----~~~----~a~~~~~~~~~~~~~~~~~~a~~~~~~~~ 330 (336)
. ......+|.++...|++++|...+++++.. +.. .+...++.++ ...++.++|....++..
T Consensus 246 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~--~~~g~~~~A~~~l~~al 320 (373)
T 1hz4_A 246 FANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLY--WQAGRKSDAQRVLLDAL 320 (373)
T ss_dssp CTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--HHHTCHHHHHHHHHHHH
T ss_pred CCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHH--HHhCCHHHHHHHHHHHH
Confidence 2 224578889999999999999999998764 211 1233333333 33455666666555543
No 87
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.52 E-value=2.1e-12 Score=114.79 Aligned_cols=186 Identities=16% Similarity=0.126 Sum_probs=145.7
Q ss_pred CChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHH
Q 019734 77 TLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156 (336)
Q Consensus 77 ~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A 156 (336)
..|++.+|..+.++..+..+. . + . +..+++++|+.+|.++ |.+|...|++++|
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~--~----------~-~--~~~~~~~~A~~~~~~a------------~~~~~~~g~~~~A 55 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKT--S----------F-M--KWKPDYDSAASEYAKA------------AVAFKNAKQLEQA 55 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCC--C----------S-S--SCSCCHHHHHHHHHHH------------HHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHHHHHHccc--c----------c-c--CCCCCHHHHHHHHHHH------------HHHHHHcCCHHHH
Confidence 467888898888877776553 1 1 1 1137899999999886 5678888999999
Q ss_pred HHHHHHHHHc----CC----HHHHHHHHHHHHH----HHHHHHHHHHHHc----CC----HHHHHHHHHHHhcCCCCccC
Q 019734 157 ISLYRQAAVL----GD----PAGQFNLGISYLQ----EEAVKLLYQASIA----GH----VRAQYQLALCLHRGRGVDFN 216 (336)
Q Consensus 157 ~~~~~~a~~~----~~----~~a~~~Lg~~~~~----~~A~~~~~ka~~~----~~----~~a~~~lg~~~~~g~g~~~~ 216 (336)
+.+|.++++. ++ ..++.++|.+|.. ++|+.+|++|++. ++ ..++.++|.+|.. ++
T Consensus 56 ~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-----g~ 130 (307)
T 2ifu_A 56 KDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-----LD 130 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-----TC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-----CC
Confidence 9999998754 33 4577889999987 8999999998764 33 4578899999964 78
Q ss_pred HHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc----CC----HHHHHHHHHHhh
Q 019734 217 LQEAARWYLRAAEG----GY----VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC----GH----GKAQLEHGLGLF 280 (336)
Q Consensus 217 ~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~ 280 (336)
+++|+.+|++|++. ++ ..++.++|.+|... +++++|+.+|++++.. +. ...++++|.++.
T Consensus 131 ~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~----g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~ 206 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQ----QKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQL 206 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHH
Confidence 99999999999753 22 56788999999753 3999999999999873 22 346788999999
Q ss_pred ccCCHHHHHHHHHHHHHcC
Q 019734 281 TEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 281 ~~~~~~~A~~~~~~A~~~~ 299 (336)
..|++++|..+|++++ ..
T Consensus 207 ~~g~~~~A~~~~~~al-~~ 224 (307)
T 2ifu_A 207 HRADYVAAQKCVRESY-SI 224 (307)
T ss_dssp HTTCHHHHHHHHHHHT-TS
T ss_pred HcCCHHHHHHHHHHHh-CC
Confidence 9999999999999998 54
No 88
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.52 E-value=4e-12 Score=129.69 Aligned_cols=214 Identities=11% Similarity=0.002 Sum_probs=153.7
Q ss_pred CCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC-CHHHHHHHH
Q 019734 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG-DPAGQFNLG 176 (336)
Q Consensus 98 ~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~-~~~a~~~Lg 176 (336)
...+.+|+.+|.++.. .+++++|+..|.+| +++.++.++|.++...|++++|+++|..|.+.. ++..-..+|
T Consensus 1102 vn~p~vWsqLAKAql~----~G~~kEAIdsYiKA---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~La 1174 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQ----KGMVKEAIDSYIKA---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELI 1174 (1630)
T ss_pred cCCHHHHHHHHHHHHh----CCCHHHHHHHHHhc---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHH
Confidence 3467788888888888 47888888888876 788888888888888888888888888877653 333444577
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcccHHHH
Q 019734 177 ISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 256 (336)
Q Consensus 177 ~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A 256 (336)
.+|....-+..++..++..+...+..+|..+.. .+++++|+.+|.++ ..+..++.+|.+.. ++++|
T Consensus 1175 faYAKl~rleele~fI~~~n~ad~~~iGd~le~----eg~YeeA~~~Y~kA------~ny~rLA~tLvkLg----e~q~A 1240 (1630)
T 1xi4_A 1175 FALAKTNRLAELEEFINGPNNAHIQQVGDRCYD----EKMYDAAKLLYNNV------SNFGRLASTLVHLG----EYQAA 1240 (1630)
T ss_pred HHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHh----cCCHHHHHHHHHhh------hHHHHHHHHHHHhC----CHHHH
Confidence 777661111122233444566677889999888 88999999999986 47778888886642 78888
Q ss_pred HHHHHHHHHcC---------------------------CHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcHHHH--HHH
Q 019734 257 RKWMKRAADCG---------------------------HGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD--HVK 307 (336)
Q Consensus 257 ~~~~~~a~~~~---------------------------~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~a~--~~~ 307 (336)
++.+++|.... +++-...++..|...|.+++|+.+++.|+........ ..+
T Consensus 1241 IEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftEL 1320 (1630)
T 1xi4_A 1241 VDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL 1320 (1630)
T ss_pred HHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHH
Confidence 88888874321 3334556777788899999999999999887655443 347
Q ss_pred HHHHhhcChhcHHHHHHHHHHhhcC
Q 019734 308 NVILQQLSATSRDRAMLVVDSWRAM 332 (336)
Q Consensus 308 ~~~~~~~~~~~~~~a~~~~~~~~~~ 332 (336)
+.++....++...++....-+-...
T Consensus 1321 aiLyaKy~peklmEhlk~f~~rini 1345 (1630)
T 1xi4_A 1321 AILYSKFKPQKMREHLELFWSRVNI 1345 (1630)
T ss_pred HHHHHhCCHHHHHHHHHHHHHhccc
Confidence 7887777777776666655544433
No 89
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.49 E-value=3.9e-13 Score=106.66 Aligned_cols=128 Identities=13% Similarity=0.066 Sum_probs=111.1
Q ss_pred CCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCH
Q 019734 76 FTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKK 153 (336)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~ 153 (336)
...|++++|+..++......++ ++.+++.||.+|.. .+++++|+.+|+++++. +++.+++.+|.+|...|++
T Consensus 8 ~~~~~~e~ai~~~~~a~~~~p~--~~~~~~~la~~y~~----~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 8 RSKADVERYIASVQGSTPSPRQ--KSIKGFYFAKLYYE----AKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHSCSHHH--HHTTHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHcChHHHHHHHHHHhcccCcc--cHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 4668999998777777766655 77889999999999 69999999999999987 5899999999999999999
Q ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHH-HHHHHHHc--CCHHHHHHHHHHHhc
Q 019734 154 EAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVK-LLYQASIA--GHVRAQYQLALCLHR 209 (336)
Q Consensus 154 ~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~-~~~ka~~~--~~~~a~~~lg~~~~~ 209 (336)
++|+.+|+++++. +++.++++||.+|.. ++|.. ++++|++. +++.++...+.++..
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~ 146 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDC 146 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 9999999999865 789999999999988 55555 56899764 789999999988875
No 90
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.46 E-value=7.8e-13 Score=114.34 Aligned_cols=208 Identities=15% Similarity=0.057 Sum_probs=141.4
Q ss_pred CcCCHHHHHHHHHHHHHc-------C---CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----------CCHHHHHHHH
Q 019734 117 VRKNLDKALDSFLKGAAR-------G---STLAMVDAGLMYWEMDKKEAAISLYRQAAVL----------GDPAGQFNLG 176 (336)
Q Consensus 117 ~~~~~~~A~~~~~~A~~~-------~---~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----------~~~~a~~~Lg 176 (336)
..+++++|+.+|++|+.. + .+.+++.+|.+|...|++++|+.+|+++++. ..+.++.++|
T Consensus 13 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~ 92 (283)
T 3edt_B 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLA 92 (283)
T ss_dssp CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 367888889988888863 2 3578899999999999999999999999854 2356778888
Q ss_pred HHHHH----HHHHHHHHHHHHc----------CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--------C--C
Q 019734 177 ISYLQ----EEAVKLLYQASIA----------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--------G--Y 232 (336)
Q Consensus 177 ~~~~~----~~A~~~~~ka~~~----------~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--------~--~ 232 (336)
.+|.. ++|+.+|+++++. ....+++++|.+|.. .+++++|+.+|+++++. . .
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 168 (283)
T 3edt_B 93 VLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN----QGKAEEVEYYYRRALEIYATRLGPDDPNV 168 (283)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 88887 8888888888764 235678888888887 78888888888888654 1 3
Q ss_pred HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC-----------CHHHHHHHHHHhhccC------CHHHHHHHHHHH
Q 019734 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-----------HGKAQLEHGLGLFTEG------EMMKAVVYLELA 295 (336)
Q Consensus 233 ~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~-----------~~~a~~~lg~~~~~~~------~~~~A~~~~~~A 295 (336)
..++.++|.+|.. .+++++|+.+|++++... ....+..++..+...+ .+.++..+++..
T Consensus 169 ~~~~~~la~~~~~----~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (283)
T 3edt_B 169 AKTKNNLASCYLK----QGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKAC 244 (283)
T ss_dssp HHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CC
T ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhc
Confidence 5677888888865 338888888888887631 1233455555444433 344444444443
Q ss_pred HHcCcHHHHHHHHHHHhhcChhcHHHHHHHHHHhhcC
Q 019734 296 TRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAM 332 (336)
Q Consensus 296 ~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 332 (336)
....+..+.............++.++|....++.++.
T Consensus 245 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 245 KVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3333334444444444445567788898888877654
No 91
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.46 E-value=9.6e-12 Score=113.01 Aligned_cols=217 Identities=11% Similarity=-0.033 Sum_probs=169.4
Q ss_pred HHHHhcCCChhHHhhhHHHHHHHHHhCCCCCH----HHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----C------
Q 019734 70 NKIAASFTLPQLRAASLVCKSWNDALRPLREA----MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----G------ 135 (336)
Q Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~----~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~------ 135 (336)
..+..++..|++++|...+.+.++..+..++. .++..+|.++.. .+++++|+.+|++++.. +
T Consensus 58 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~G~~~~A~~~~~~al~~~~~~~~~~~~~ 133 (373)
T 1hz4_A 58 VLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA----QGFLQTAWETQEKAFQLINEQHLEQLPM 133 (373)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHTTCTTSTH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHhccccCcH
Confidence 34445567899999999999988877765554 447889999988 68999999999999874 1
Q ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC-------CHHHHHHHHHHHHH----HHHHHHHHHHHHc----CCH-HH
Q 019734 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLG-------DPAGQFNLGISYLQ----EEAVKLLYQASIA----GHV-RA 199 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~-------~~~a~~~Lg~~~~~----~~A~~~~~ka~~~----~~~-~a 199 (336)
...++..+|.++...|++++|+.+++++++.. ...++..+|.++.. ++|+.+++++... +.+ ..
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~ 213 (373)
T 1hz4_A 134 HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDW 213 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhH
Confidence 23567789999999999999999999998642 24678899999988 9999999999764 222 11
Q ss_pred H--H--HHHHHHhcCCCCccCHHHHHHHHHHHHHCCC------HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc---
Q 019734 200 Q--Y--QLALCLHRGRGVDFNLQEAARWYLRAAEGGY------VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--- 266 (336)
Q Consensus 200 ~--~--~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~~------~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--- 266 (336)
. . .++.++.. .+++++|..+++++..... ...+..+|.++... +++++|..++++++..
T Consensus 214 ~~~~~~~~~~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~----g~~~~A~~~l~~a~~~~~~ 285 (373)
T 1hz4_A 214 ISNANKVRVIYWQM----TGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILL----GEFEPAEIVLEELNENARS 285 (373)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----CCCHHHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHh
Confidence 1 1 23344555 7899999999999875432 33567888888653 3999999999999763
Q ss_pred -CC----HHHHHHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 267 -GH----GKAQLEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 267 -~~----~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
+. ..++..+|.++...|++++|..+|++++..
T Consensus 286 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al~~ 322 (373)
T 1hz4_A 286 LRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKL 322 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 22 246788999999999999999999999874
No 92
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.45 E-value=1.1e-12 Score=106.79 Aligned_cols=157 Identities=10% Similarity=-0.053 Sum_probs=101.8
Q ss_pred HHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC-CHHHHHHHHHH
Q 019734 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG-DPAGQFNLGIS 178 (336)
Q Consensus 102 ~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~-~~~a~~~Lg~~ 178 (336)
+.++.+|..+.. .+++++|+.+|++++.. +++.+++.+|.++...|++++|+..|++++... ++.....++.+
T Consensus 7 ~~~~~~a~~~~~----~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~ 82 (176)
T 2r5s_A 7 EQLLKQVSELLQ----QGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKL 82 (176)
T ss_dssp TTHHHHHHHHHH----TTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHH
Confidence 456777888877 58899999999988765 688899999999999999999999998887543 45444333333
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHH
Q 019734 179 YLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQA 256 (336)
Q Consensus 179 ~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A 256 (336)
... . ..+..+|+..|+++++ ++++.+++++|.++... +++++|
T Consensus 83 ~~~---------------------------~----~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~----g~~~~A 127 (176)
T 2r5s_A 83 ELH---------------------------Q----QAAESPELKRLEQELAANPDNFELACELAVQYNQV----GRDEEA 127 (176)
T ss_dssp HHH---------------------------H----HHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT----TCHHHH
T ss_pred HHH---------------------------h----hcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----ccHHHH
Confidence 221 0 0011234555555543 35566666666666442 266666
Q ss_pred HHHHHHHHHcC--C--HHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 257 RKWMKRAADCG--H--GKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 257 ~~~~~~a~~~~--~--~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
+.+|++++... + +.++.+||.++...|+.++|..+|++++.
T Consensus 128 ~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 128 LELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 66666666543 1 34666667666667777777777766653
No 93
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.44 E-value=1.8e-12 Score=115.26 Aligned_cols=189 Identities=16% Similarity=0.072 Sum_probs=147.4
Q ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHHHHHHHHHHH
Q 019734 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ----EEAVKLLYQASI 193 (336)
Q Consensus 118 ~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~----~~A~~~~~ka~~ 193 (336)
.+++++|..++++|.+.... . ++...+++++|+.+|.++ |.+|.. ++|+.+|+++++
T Consensus 4 ~~~~~eA~~~~~~a~k~~~~-~------~~~~~~~~~~A~~~~~~a------------~~~~~~~g~~~~A~~~~~~al~ 64 (307)
T 2ifu_A 4 AQKISEAHEHIAKAEKYLKT-S------FMKWKPDYDSAASEYAKA------------AVAFKNAKQLEQAKDAYLQEAE 64 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHCC-C------SSSCSCCHHHHHHHHHHH------------HHHHHHTTCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHccc-c------ccCCCCCHHHHHHHHHHH------------HHHHHHcCCHHHHHHHHHHHHH
Confidence 36889999999998764211 0 111268999999999987 345554 889999999976
Q ss_pred c----CC----HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCCCCcccHHHHH
Q 019734 194 A----GH----VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----GY----VRAMYNTSLCYSFGEGLPLSHRQAR 257 (336)
Q Consensus 194 ~----~~----~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~g~~~~~~~A~ 257 (336)
. ++ ..++.++|.+|.. .+++++|+.+|+++++. ++ ..++.++|.+|.. | ++++|+
T Consensus 65 ~~~~~~~~~~~a~~~~~lg~~~~~----~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~--g---~~~~A~ 135 (307)
T 2ifu_A 65 AHANNRSLFHAAKAFEQAGMMLKD----LQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP--L---DLSKAV 135 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHH----TTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT--T---CHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHh----CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc--C---CHHHHH
Confidence 4 33 4588999999998 78999999999999754 33 4678899999965 4 999999
Q ss_pred HHHHHHHHc----CC----HHHHHHHHHHhhccCCHHHHHHHHHHHHHc----Cc--HHHHHHHHHHHhhcChhcHHHHH
Q 019734 258 KWMKRAADC----GH----GKAQLEHGLGLFTEGEMMKAVVYLELATRA----GE--TAADHVKNVILQQLSATSRDRAM 323 (336)
Q Consensus 258 ~~~~~a~~~----~~----~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~----~~--~~a~~~~~~~~~~~~~~~~~~a~ 323 (336)
.+|+++++. ++ ..++.++|.+|...|++++|+.+|++++.. +. ..+...+..+..++..++.++|.
T Consensus 136 ~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~ 215 (307)
T 2ifu_A 136 HLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQ 215 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHH
Confidence 999999874 22 466789999999999999999999999974 22 12345566666666678899999
Q ss_pred HHHHHhhcCCCC
Q 019734 324 LVVDSWRAMPSL 335 (336)
Q Consensus 324 ~~~~~~~~~~~~ 335 (336)
..+++.+ ..|.
T Consensus 216 ~~~~~al-~~p~ 226 (307)
T 2ifu_A 216 KCVRESY-SIPG 226 (307)
T ss_dssp HHHHHHT-TSTT
T ss_pred HHHHHHh-CCCC
Confidence 9999988 7764
No 94
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.43 E-value=3.9e-12 Score=97.81 Aligned_cols=103 Identities=11% Similarity=0.075 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
.+.++..+|..|+. .+++++|+.+|++|++. .++.+++++|.+|...|++++|+..|+++++. +++.+++++
T Consensus 12 ~a~~~~~~G~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l 87 (126)
T 4gco_A 12 LAQEEKNKGNEYFK----KGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRK 87 (126)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 45666777777777 57777777777777765 46777777777777777777777777777643 455555555
Q ss_pred HHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHH
Q 019734 176 GISYLQ----EEAVKLLYQASIA--GHVRAQYQLALC 206 (336)
Q Consensus 176 g~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~ 206 (336)
|.+|.. ++|+.+|+++++. ++++++..|+.|
T Consensus 88 g~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 88 AACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 555554 4444444444432 344444444444
No 95
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.43 E-value=8.5e-11 Score=104.13 Aligned_cols=229 Identities=8% Similarity=-0.112 Sum_probs=188.4
Q ss_pred HHHHHHhcCCChhH-HhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 68 VLNKIAASFTLPQL-RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 68 ~l~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
++.........+.+ ++|..++...+...|+ +..+++..|.++... +. .++++++.++++++.. .+..+++..+
T Consensus 35 ~~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~--~~taWn~R~~~L~~l-~~-~~~~eeL~~~~~~L~~nPk~y~aW~~R~ 110 (306)
T 3dra_A 35 IMGLLLALMKAEEYSERALHITELGINELAS--HYTIWIYRFNILKNL-PN-RNLYDELDWCEEIALDNEKNYQIWNYRQ 110 (306)
T ss_dssp HHHHHHHHHHTTCCSHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHTC-TT-SCHHHHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHCcH--HHHHHHHHHHHHHHc-cc-ccHHHHHHHHHHHHHHCcccHHHHHHHH
Confidence 34444444444555 5899999999999888 899999999999883 10 4999999999999987 4889999999
Q ss_pred HHH----hcC---CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----H--HHHHHHHHHHHc--CCHHHHHHHHHHH
Q 019734 145 LMY----WEM---DKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----E--EAVKLLYQASIA--GHVRAQYQLALCL 207 (336)
Q Consensus 145 ~~~----~~~---~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~--~A~~~~~ka~~~--~~~~a~~~lg~~~ 207 (336)
.++ ... +++++++.++.++++. .+..++++.+.++.. + +++.++.++++. .+..|+++.+.++
T Consensus 111 ~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll 190 (306)
T 3dra_A 111 LIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLL 190 (306)
T ss_dssp HHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999 666 7999999999999865 799999999999987 5 999999999886 5889999999998
Q ss_pred hcCCCCccC------HHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc-----CCHHHHHH
Q 019734 208 HRGRGVDFN------LQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC-----GHGKAQLE 274 (336)
Q Consensus 208 ~~g~g~~~~------~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~-----~~~~a~~~ 274 (336)
.. .+. ++++++++++++. +.+..++++++.++.... +..+....+..+.++. ..+.+...
T Consensus 191 ~~----l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~---~~~~~~~~~~~~~~~~~~~~~~s~~al~~ 263 (306)
T 3dra_A 191 FS----KKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFD---RSITQLEEFSLQFVDLEKDQVTSSFALET 263 (306)
T ss_dssp HS----SGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTT---CCGGGGHHHHHTTEEGGGTEESCHHHHHH
T ss_pred Hh----ccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcC---CChHHHHHHHHHHHhccCCCCCCHHHHHH
Confidence 76 343 8999999999964 589999999999997653 2456666777776654 37889999
Q ss_pred HHHHhhccCCHHHHHHHHHHHHH-cCcHHHHHHH
Q 019734 275 HGLGLFTEGEMMKAVVYLELATR-AGETAADHVK 307 (336)
Q Consensus 275 lg~~~~~~~~~~~A~~~~~~A~~-~~~~~a~~~~ 307 (336)
|+.+|.+.|+.++|+.+|+++++ .++....+..
T Consensus 264 la~~~~~~~~~~~A~~~~~~l~~~~Dpir~~yW~ 297 (306)
T 3dra_A 264 LAKIYTQQKKYNESRTVYDLLKSKYNPIRSNFWD 297 (306)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHHccCCHHHHHHHHHHHHhccChHHHHHHH
Confidence 99999999999999999999997 5766665554
No 96
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.43 E-value=5e-12 Score=121.93 Aligned_cols=153 Identities=17% Similarity=0.055 Sum_probs=116.3
Q ss_pred ChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHH
Q 019734 78 LPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEA 155 (336)
Q Consensus 78 ~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~ 155 (336)
.|++++|...+.+.++..++ ++.+++.+|.+|.. .+++++|+.+|+++++. .++.+++.+|.+|...|++++
T Consensus 2 ~g~~~~A~~~~~~al~~~p~--~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~ 75 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQ--DFVAWLMLADAELG----MGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAE 75 (568)
T ss_dssp -------------------C--CHHHHHHHHHHHHH----HTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHH
T ss_pred CccHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHH
Confidence 36788888888888877666 78999999999988 68999999999999987 578999999999999999999
Q ss_pred HHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCc---cCHHHHHHHH
Q 019734 156 AISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVD---FNLQEAARWY 224 (336)
Q Consensus 156 A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~---~~~~~A~~~~ 224 (336)
|+.+|+++++. +++.+++++|.+|.. ++|+.+|+++++. +++.+++++|.++.. . +++++|+..|
T Consensus 76 A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~----~~~~g~~~~A~~~~ 151 (568)
T 2vsy_A 76 AAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR----LCDWRALDVLSAQV 151 (568)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCCTTHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hhccccHHHHHHHH
Confidence 99999999865 788999999999988 9999999999875 578899999999987 6 8999999999
Q ss_pred HHHHHC--CCHHHHHHHH
Q 019734 225 LRAAEG--GYVRAMYNTS 240 (336)
Q Consensus 225 ~~a~~~--~~~~a~~~lg 240 (336)
+++++. .+..++..++
T Consensus 152 ~~al~~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 152 RAAVAQGVGAVEPFAFLS 169 (568)
T ss_dssp HHHHHHTCCCSCHHHHTT
T ss_pred HHHHhcCCcccChHHHhC
Confidence 998764 4555665555
No 97
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.42 E-value=1.3e-11 Score=117.90 Aligned_cols=206 Identities=10% Similarity=-0.041 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHHhc-------CCCHH-------HHHHHHHHHHH---cCCHHHHHHHHHHHHH-
Q 019734 122 DKALDSFLKGAAR--GSTLAMVDAGLMYWE-------MDKKE-------AAISLYRQAAV---LGDPAGQFNLGISYLQ- 181 (336)
Q Consensus 122 ~~A~~~~~~A~~~--~~~~a~~~lg~~~~~-------~~~~~-------~A~~~~~~a~~---~~~~~a~~~Lg~~~~~- 181 (336)
.+++..|++|+.. .++..++.+|.++.. .|+++ +|+..|++|++ ++++..++.+|.++..
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~ 334 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 334 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 4788899999886 689999999999985 68876 99999999986 3689999999999887
Q ss_pred ---HHHHHHHHHHHHcC--CH-HHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCcccH
Q 019734 182 ---EEAVKLLYQASIAG--HV-RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG--YVRAMYNTSLCYSFGEGLPLSH 253 (336)
Q Consensus 182 ---~~A~~~~~ka~~~~--~~-~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~g~~~~~ 253 (336)
++|...|+++++.. ++ .++..+|.++.. .+++++|+..|++|++.. ....+...+.+..... ++.
T Consensus 335 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~---~~~ 407 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR----AEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCS---KDK 407 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHT---CCH
T ss_pred CCHHHHHHHHHHHhCccccCchHHHHHHHHHHHH----hcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHc---CCh
Confidence 99999999999864 44 589999999877 688999999999998753 3444444444422222 389
Q ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC--cHH--HHHHHHHHHhhcChhcHHHHHHHHH
Q 019734 254 RQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG--ETA--ADHVKNVILQQLSATSRDRAMLVVD 327 (336)
Q Consensus 254 ~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~--~~~--a~~~~~~~~~~~~~~~~~~a~~~~~ 327 (336)
++|...|+++++. +++..+.+++.++...|++++|..+|++++... +++ ...+...+......++.+.+..+.+
T Consensus 408 ~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~~~~~~~~~~ 487 (530)
T 2ooe_A 408 SVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEK 487 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999999874 678889999999999999999999999999864 222 1122222222233356677777777
Q ss_pred HhhcCCC
Q 019734 328 SWRAMPS 334 (336)
Q Consensus 328 ~~~~~~~ 334 (336)
+..+..|
T Consensus 488 r~~~~~p 494 (530)
T 2ooe_A 488 RRFTAFR 494 (530)
T ss_dssp HHHHHTH
T ss_pred HHHHHCc
Confidence 6665554
No 98
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.42 E-value=1.9e-12 Score=124.81 Aligned_cols=142 Identities=18% Similarity=0.009 Sum_probs=72.8
Q ss_pred CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHH
Q 019734 119 KNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQ 190 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~k 190 (336)
+++++|+.+|+++++. +++.+++.+|.++...|++++|+.+|+++++. +++.+++++|.+|.. ++|+.+|++
T Consensus 3 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 82 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQ 82 (568)
T ss_dssp ------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 6788899999988876 57888889999998889999988888888765 556666666666655 555555555
Q ss_pred HHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHH
Q 019734 191 ASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265 (336)
Q Consensus 191 a~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~ 265 (336)
+++. +++.+++++|.+|.. .+++++|+.+|+++++ +++..++.++|.++.... ..+++++|...|+++++
T Consensus 83 al~~~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~-~~g~~~~A~~~~~~al~ 156 (568)
T 2vsy_A 83 ASDAAPEHPGIALWLGHALED----AGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLC-DWRALDVLSAQVRAAVA 156 (568)
T ss_dssp HHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CCTTHHHHHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh-ccccHHHHHHHHHHHHh
Confidence 5443 344455555555544 4445555555555433 234444444444443320 00244444444444444
No 99
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.42 E-value=6.3e-12 Score=110.68 Aligned_cols=158 Identities=8% Similarity=-0.062 Sum_probs=89.7
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
+.++++.+|..+.. .+++++|+..|++++.. +++.+++.||.++...|++++|+..|++++.. +.......+
T Consensus 116 ~~~~~~~~a~~~~~----~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~ 191 (287)
T 3qou_A 116 EEELXAQQAMQLMQ----ESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVA 191 (287)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHH
T ss_pred chhhHHHHHHHHHh----CCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHH
Confidence 55666666666665 46666666666666654 45666666666666666666666666665533 222222222
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCCCCcccH
Q 019734 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA--EGGYVRAMYNTSLCYSFGEGLPLSH 253 (336)
Q Consensus 176 g~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~--~~~~~~a~~~lg~~~~~~~g~~~~~ 253 (336)
+..+.. .++...|+..|++++ .++++.+++++|.+|.... ++
T Consensus 192 ----------------------------~~~l~~----~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g----~~ 235 (287)
T 3qou_A 192 ----------------------------QIELLX----QAADTPEIQQLQQQVAENPEDAALATQLALQLHQVG----RN 235 (287)
T ss_dssp ----------------------------HHHHHH----HHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH
T ss_pred ----------------------------HHHHHh----hcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcc----cH
Confidence 222222 233444555555553 2355666666666664422 66
Q ss_pred HHHHHHHHHHHHc--CC--HHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 254 RQARKWMKRAADC--GH--GKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 254 ~~A~~~~~~a~~~--~~--~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
++|+..|++++.. ++ ..++.+||.++...|+.++|..+|++++.
T Consensus 236 ~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 236 EEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 6666666666653 22 45666666666666666666666666653
No 100
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.41 E-value=5.7e-12 Score=96.85 Aligned_cols=104 Identities=15% Similarity=0.098 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHH
Q 019734 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCL 207 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~ 207 (336)
.++++.++|..|+..|++++|+.+|+++++. .++.+++++|.+|.. ++|+.+|+++++. .++.+++++|.+|
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 91 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACL 91 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 3567788999999999999999999999854 678888888888877 7777777777664 4677777777777
Q ss_pred hcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHH
Q 019734 208 HRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCY 243 (336)
Q Consensus 208 ~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~ 243 (336)
.. .+++++|+.+|+++++ +++..++..|+.|+
T Consensus 92 ~~----~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 92 VA----MREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HH----CCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 76 6777777777777743 46677777776654
No 101
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.38 E-value=8.8e-12 Score=109.77 Aligned_cols=162 Identities=10% Similarity=-0.050 Sum_probs=118.8
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Q 019734 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRA 199 (336)
Q Consensus 120 ~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a 199 (336)
+.+.-..++.... .++.++++.+|..+...|++++|+..|+++++. +.+++.+
T Consensus 101 ~~~~l~~~l~~~l-p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------------------------~P~~~~a 153 (287)
T 3qou_A 101 PEEAIRALLDXVL-PREEELXAQQAMQLMQESNYTDALPLLXDAWQL--------------------------SNQNGEI 153 (287)
T ss_dssp CHHHHHHHHHHHS-CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------------------------TTSCHHH
T ss_pred CHHHHHHHHHHHc-CCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHh--------------------------CCcchhH
Confidence 3444444444443 467788999999999999999999998888732 3344455
Q ss_pred HHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEH 275 (336)
Q Consensus 200 ~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~l 275 (336)
++.||.++.. .+++++|+.+|++++. +.........+..+.. ..+.++|+..|++++.. +++.++++|
T Consensus 154 ~~~la~~~~~----~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~----~~~~~~a~~~l~~al~~~P~~~~~~~~l 225 (287)
T 3qou_A 154 GLLLAETLIA----LNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLX----QAADTPEIQQLQQQVAENPEDAALATQL 225 (287)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHH----HHTSCHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHH----CCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHh----hcccCccHHHHHHHHhcCCccHHHHHHH
Confidence 5555555555 7889999999988854 3334444555554543 22677899999999875 778999999
Q ss_pred HHHhhccCCHHHHHHHHHHHHHcC--c--HHHHHHHHHHHhhcCh
Q 019734 276 GLGLFTEGEMMKAVVYLELATRAG--E--TAADHVKNVILQQLSA 316 (336)
Q Consensus 276 g~~~~~~~~~~~A~~~~~~A~~~~--~--~~a~~~~~~~~~~~~~ 316 (336)
|.++...|++++|+..|+++++.. + ..+...+..++..+..
T Consensus 226 a~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 270 (287)
T 3qou_A 226 ALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGT 270 (287)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCT
T ss_pred HHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCC
Confidence 999999999999999999999864 3 5677777777776644
No 102
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.38 E-value=3.4e-10 Score=108.11 Aligned_cols=212 Identities=9% Similarity=-0.017 Sum_probs=168.3
Q ss_pred HhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCC---CcCCHH-------HHHHHHHHHHH-c--CCHHHHHHHHHHHh
Q 019734 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG---VRKNLD-------KALDSFLKGAA-R--GSTLAMVDAGLMYW 148 (336)
Q Consensus 82 ~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g---~~~~~~-------~A~~~~~~A~~-~--~~~~a~~~lg~~~~ 148 (336)
..+..++.+.+...|. ++.+++.+|.++..-.. ..++++ +|+..|++|+. . .+...++.+|.++.
T Consensus 255 ~~a~~~y~~al~~~p~--~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~ 332 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGH--HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEE 332 (530)
T ss_dssp HHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 3667788888888877 89999999999874000 024665 99999999996 3 57999999999999
Q ss_pred cCCCHHHHHHHHHHHHHc--CCH-HHHHHHHHHHHH----HHHHHHHHHHHHcC--CHHHHHHHHHH-HhcCCCCccCHH
Q 019734 149 EMDKKEAAISLYRQAAVL--GDP-AGQFNLGISYLQ----EEAVKLLYQASIAG--HVRAQYQLALC-LHRGRGVDFNLQ 218 (336)
Q Consensus 149 ~~~~~~~A~~~~~~a~~~--~~~-~a~~~Lg~~~~~----~~A~~~~~ka~~~~--~~~a~~~lg~~-~~~g~g~~~~~~ 218 (336)
..|++++|+..|+++++. .++ .++..+|.++.. ++|+..|++|++.. ....+...+.+ +.. .++++
T Consensus 333 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~----~~~~~ 408 (530)
T 2ooe_A 333 SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYC----SKDKS 408 (530)
T ss_dssp HTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHH----TCCHH
T ss_pred hcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH----cCChh
Confidence 999999999999999986 344 588999988866 99999999999763 34555555544 333 58899
Q ss_pred HHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC--CHH----HHHHHHHHhhccCCHHHHHH
Q 019734 219 EAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG--HGK----AQLEHGLGLFTEGEMMKAVV 290 (336)
Q Consensus 219 ~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~--~~~----a~~~lg~~~~~~~~~~~A~~ 290 (336)
+|+.+|+++++ ++++..+..++.++.. .| +.++|..+|++++... ++. .+..........|+.+.+..
T Consensus 409 ~A~~~~e~al~~~p~~~~~~~~~~~~~~~-~g---~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~~~~~~~ 484 (530)
T 2ooe_A 409 VAFKIFELGLKKYGDIPEYVLAYIDYLSH-LN---EDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILK 484 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTT-TT---CHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHh-CC---CHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999965 5789999999998854 33 9999999999999863 332 55555666677899999999
Q ss_pred HHHHHHHcCcHHH
Q 019734 291 YLELATRAGETAA 303 (336)
Q Consensus 291 ~~~~A~~~~~~~a 303 (336)
+++++++.-+.++
T Consensus 485 ~~~r~~~~~p~~~ 497 (530)
T 2ooe_A 485 VEKRRFTAFREEY 497 (530)
T ss_dssp HHHHHHHHTHHHH
T ss_pred HHHHHHHHCchhc
Confidence 9999998766444
No 103
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.38 E-value=2.9e-12 Score=104.18 Aligned_cols=157 Identities=8% Similarity=-0.046 Sum_probs=108.2
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCH
Q 019734 138 LAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217 (336)
Q Consensus 138 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~ 217 (336)
+..+.+|..+...|++++|+..|+++++ .+.+++.+++.+|.+|.. .+++
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~--------------------------~~P~~~~a~~~la~~~~~----~g~~ 56 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSD--------------------------ELQSRGDVKLAKADCLLE----TKQF 56 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCH--------------------------HHHTSHHHHHHHHHHHHH----TTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--------------------------HCCCcHHHHHHHHHHHHH----CCCH
Confidence 3466778888888888888888777653 233455555555555555 6788
Q ss_pred HHHHHHHHHHHHCC-CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHH
Q 019734 218 QEAARWYLRAAEGG-YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLEL 294 (336)
Q Consensus 218 ~~A~~~~~~a~~~~-~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~ 294 (336)
++|+..|++++... ++.....++.+...+.+ +..+|+..|++++.. +++.+++++|.++...|++++|+.+|++
T Consensus 57 ~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~---~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~ 133 (176)
T 2r5s_A 57 ELAQELLATIPLEYQDNSYKSLIAKLELHQQA---AESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWN 133 (176)
T ss_dssp HHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHH---TSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccCChHHHHHHHHHHHHhhc---ccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 88888888875433 55555555544322111 233579999999885 6789999999999999999999999999
Q ss_pred HHHcCc----HHHHHHHHHHHhhcChhcHHHHHHHHHHh
Q 019734 295 ATRAGE----TAADHVKNVILQQLSATSRDRAMLVVDSW 329 (336)
Q Consensus 295 A~~~~~----~~a~~~~~~~~~~~~~~~~~~a~~~~~~~ 329 (336)
+++..+ ..+...++.++..+. +.++|....++.
T Consensus 134 ~l~~~p~~~~~~a~~~l~~~~~~~g--~~~~A~~~y~~a 170 (176)
T 2r5s_A 134 ILKVNLGAQDGEVKKTFMDILSALG--QGNAIASKYRRQ 170 (176)
T ss_dssp HHTTCTTTTTTHHHHHHHHHHHHHC--SSCHHHHHHHHH
T ss_pred HHHhCcccChHHHHHHHHHHHHHhC--CCCcHHHHHHHH
Confidence 998763 347777777666553 344455554443
No 104
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.38 E-value=2.1e-11 Score=103.22 Aligned_cols=176 Identities=13% Similarity=-0.025 Sum_probs=138.5
Q ss_pred hHHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCC-HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CC---HH
Q 019734 65 PFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLRE-AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GS---TL 138 (336)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~---~~ 138 (336)
+......+...+..|++++|+..+.++++..|.... ..+++.+|.+|.. .+++++|+..|+++++. ++ +.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~----~~~~~~A~~~~~~~l~~~P~~~~~~~ 79 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK----NADLPLAQAAIDRFIRLNPTHPNIDY 79 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCTTHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHCcCCCcHHH
Confidence 345677788888999999999999999998776433 5899999999999 68999999999999986 23 35
Q ss_pred HHHHHHHHHhc------------------CCCHHHHHHHHHHHHHc--CCHHHH---HHHHHHHHHHHHHHHHHHHHHcC
Q 019734 139 AMVDAGLMYWE------------------MDKKEAAISLYRQAAVL--GDPAGQ---FNLGISYLQEEAVKLLYQASIAG 195 (336)
Q Consensus 139 a~~~lg~~~~~------------------~~~~~~A~~~~~~a~~~--~~~~a~---~~Lg~~~~~~~A~~~~~ka~~~~ 195 (336)
+++.+|.++.. .|++++|+..|+++++. +++.+. ..++.+.. .
T Consensus 80 a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~--------------~ 145 (225)
T 2yhc_A 80 VMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKD--------------R 145 (225)
T ss_dssp HHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHH--------------H
T ss_pred HHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHH--------------H
Confidence 89999999875 57899999999999975 454433 22222221 1
Q ss_pred CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCH---HHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc
Q 019734 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYV---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 266 (336)
Q Consensus 196 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~---~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~ 266 (336)
.....+.+|.+|.. .+++.+|+..|+++++. +++ .+++.+|.+|.... ++++|+..++++...
T Consensus 146 ~~~~~~~~a~~~~~----~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g----~~~~A~~~~~~l~~~ 213 (225)
T 2yhc_A 146 LAKYEYSVAEYYTE----RGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQ----MNAQAEKVAKIIAAN 213 (225)
T ss_dssp HHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH----cCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcC----CcHHHHHHHHHHHhh
Confidence 12344678999988 89999999999999865 343 78999999997643 999999999988764
No 105
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.37 E-value=6.3e-11 Score=121.01 Aligned_cols=228 Identities=15% Similarity=0.084 Sum_probs=166.1
Q ss_pred HHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCC
Q 019734 72 IAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151 (336)
Q Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~ 151 (336)
+..+...|.+++|..+|++.- . ...+. ..++.. .+++++|+++++++ ..+.+|+++|..+...|
T Consensus 1056 A~Iai~lglyEEAf~IYkKa~----~--~~~A~---~VLie~----i~nldrAiE~Aerv---n~p~vWsqLAKAql~~G 1119 (1630)
T 1xi4_A 1056 ANIAISNELFEEAFAIFRKFD----V--NTSAV---QVLIEH----IGNLDRAYEFAERC---NEPAVWSQLAKAQLQKG 1119 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHHcC----C--HHHHH---HHHHHH----HhhHHHHHHHHHhc---CCHHHHHHHHHHHHhCC
Confidence 444567788888876666542 2 22222 333323 46889999888865 77999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHHHHHHHHHHHcC-CHHHHHHHHHHHhcCCCCccCHHHHHHHHHH
Q 019734 152 KKEAAISLYRQAAVLGDPAGQFNLGISYLQ----EEAVKLLYQASIAG-HVRAQYQLALCLHRGRGVDFNLQEAARWYLR 226 (336)
Q Consensus 152 ~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~~-~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~ 226 (336)
++++|+..|.+| +++.++..+|.++.. ++|+++|++|.+.. ++.....+|.+|.. .+++++ ++.|
T Consensus 1120 ~~kEAIdsYiKA---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAK----l~rlee-le~f-- 1189 (1630)
T 1xi4_A 1120 MVKEAIDSYIKA---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAK----TNRLAE-LEEF-- 1189 (1630)
T ss_pred CHHHHHHHHHhc---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHh----hcCHHH-HHHH--
Confidence 999999999876 899999999999998 99999999997754 44455579999987 566664 4444
Q ss_pred HHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcH-----
Q 019734 227 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGET----- 301 (336)
Q Consensus 227 a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~----- 301 (336)
++..+...+..+|..+.. .+++++|..+|.++ ..+..++.+|...|++++|+..+++|......
T Consensus 1190 -I~~~n~ad~~~iGd~le~----eg~YeeA~~~Y~kA------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~ 1258 (1630)
T 1xi4_A 1190 -INGPNNAHIQQVGDRCYD----EKMYDAAKLLYNNV------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCF 1258 (1630)
T ss_pred -HhCCCHHHHHHHHHHHHh----cCCHHHHHHHHHhh------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHH
Confidence 355566788899999975 33999999999997 36789999999999999999999998432210
Q ss_pred --------------------HHHHHHHHHHhhcChhcHHHHHHHHHHhhcCCCCC
Q 019734 302 --------------------AADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 336 (336)
Q Consensus 302 --------------------~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 336 (336)
.+......+..+...+..++++.+...-+.+.+.|
T Consensus 1259 acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH 1313 (1630)
T 1xi4_A 1259 ACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAH 1313 (1630)
T ss_pred HHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhH
Confidence 01112222223335566777777777766666655
No 106
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.32 E-value=2.6e-11 Score=96.30 Aligned_cols=100 Identities=15% Similarity=0.079 Sum_probs=88.2
Q ss_pred CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHH
Q 019734 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGK 270 (336)
Q Consensus 195 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~ 270 (336)
+++.+++.+|.++.. .+++++|+.+|++++. +.++.+++++|.+|.... ++++|+.+|++++.. +++.
T Consensus 34 ~~~~~~~~lg~~~~~----~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g----~~~~Ai~~~~~al~l~P~~~~ 105 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYN----KGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKE----QFQQAADLYAVAFALGKNDYT 105 (151)
T ss_dssp HHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc----cHHHHHHHHHHHHhhCCCCcH
Confidence 366788999999888 8999999999999965 578999999999997633 999999999999875 6789
Q ss_pred HHHHHHHHhhccCCHHHHHHHHHHHHHcCcHH
Q 019734 271 AQLEHGLGLFTEGEMMKAVVYLELATRAGETA 302 (336)
Q Consensus 271 a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~ 302 (336)
+++++|.+|...|++++|+.+|+++++..+..
T Consensus 106 ~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 106 PVFHTGQCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 99999999999999999999999999976443
No 107
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.32 E-value=1.7e-10 Score=101.55 Aligned_cols=161 Identities=9% Similarity=-0.036 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC--CH------HHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CC
Q 019734 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG--ST------LAMVDAGLMYWEMDKKEAAISLYRQAAVL----GD 168 (336)
Q Consensus 101 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~--~~------~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~~ 168 (336)
...+...+..+.. .+++++|+.+|+++++.. .. ..++.+|.++...|++++|+.+|+++++. .+
T Consensus 75 ~~~l~~~~~~~~~----~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 150 (293)
T 2qfc_A 75 KKQFKDQVIMLCK----QKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSC
T ss_pred HHHHHHHHHHHHH----hhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCc
Confidence 3444455555555 456777777776666542 11 23445666666666666666666666542 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH---C--CC----HHHHHHH
Q 019734 169 PAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE---G--GY----VRAMYNT 239 (336)
Q Consensus 169 ~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~---~--~~----~~a~~~l 239 (336)
.. ....+++++|.+|.. .+++++|+.+|+++++ . ++ ..+++++
T Consensus 151 ~~------------------------~~~~~~~~lg~~y~~----~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nl 202 (293)
T 2qfc_A 151 VY------------------------QNLYIENAIANIYAE----NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNH 202 (293)
T ss_dssp TT------------------------HHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred hH------------------------HHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhH
Confidence 00 013456667777776 6788888888888762 1 22 2578888
Q ss_pred HHHHHcCCCCcccHHHHHHHHHHHHHcC--------CHHHHHHHHHHhhccCCHHHH-HHHHHHHHH
Q 019734 240 SLCYSFGEGLPLSHRQARKWMKRAADCG--------HGKAQLEHGLGLFTEGEMMKA-VVYLELATR 297 (336)
Q Consensus 240 g~~~~~~~g~~~~~~~A~~~~~~a~~~~--------~~~a~~~lg~~~~~~~~~~~A-~~~~~~A~~ 297 (336)
|.+|... +++++|+.++++++... ...+++++|.+|...|++++| ..+|++|+.
T Consensus 203 g~~y~~~----~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~ 265 (293)
T 2qfc_A 203 AKALYLD----SRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASF 265 (293)
T ss_dssp HHHHHHT----TCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHH----hhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 8888753 38899999998887631 156789999999999999999 888999876
No 108
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.31 E-value=5.5e-12 Score=100.20 Aligned_cols=91 Identities=15% Similarity=0.082 Sum_probs=64.7
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
++.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.+|...|++++|+..|++++.. +++.+++++
T Consensus 35 ~~~~~~~lg~~~~~----~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~l 110 (151)
T 3gyz_A 35 MMDDIYSYAYDFYN----KGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHT 110 (151)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHH
Confidence 56677778877777 57788888888887776 46777888888888788888888877777643 566666666
Q ss_pred HHHHHH----HHHHHHHHHHHHc
Q 019734 176 GISYLQ----EEAVKLLYQASIA 194 (336)
Q Consensus 176 g~~~~~----~~A~~~~~ka~~~ 194 (336)
|.+|.. ++|+.+|+++++.
T Consensus 111 g~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 111 GQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Confidence 666665 5555555555554
No 109
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.30 E-value=5.1e-12 Score=109.94 Aligned_cols=184 Identities=13% Similarity=0.053 Sum_probs=147.3
Q ss_pred HHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHH-------HHHHhcCCCHHHHHHHHHHHHHc--CC----
Q 019734 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDA-------GLMYWEMDKKEAAISLYRQAAVL--GD---- 168 (336)
Q Consensus 104 ~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~l-------g~~~~~~~~~~~A~~~~~~a~~~--~~---- 168 (336)
++..|.-+. .+|...|...|.+++.. +..++|..+ +.++....+..+++..+++++.. +.
T Consensus 10 ~~~~~~~~~-----~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~ 84 (282)
T 4f3v_A 10 LFESAVSML-----PMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNAR 84 (282)
T ss_dssp HHHHHHHHT-----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCE
T ss_pred HHHHHhccc-----CCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Confidence 444555442 57999999999999887 578999988 88888888888999999988862 11
Q ss_pred -----------------HHHHHHHHHHHHH----HHHHHHHHHHHHcC--CHHHHHHHHHHHhcCCCCccCHHHHHHHHH
Q 019734 169 -----------------PAGQFNLGISYLQ----EEAVKLLYQASIAG--HVRAQYQLALCLHRGRGVDFNLQEAARWYL 225 (336)
Q Consensus 169 -----------------~~a~~~Lg~~~~~----~~A~~~~~ka~~~~--~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~ 225 (336)
.+....++.++.. ++|.+.|...+..+ +. +.|.+|.++.. .+++++|+.+|+
T Consensus 85 ~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~----~~r~~dA~~~l~ 159 (282)
T 4f3v_A 85 IAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGA----AERWTDVIDQVK 159 (282)
T ss_dssp EECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHH----TTCHHHHHHHHT
T ss_pred hccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHH----cCCHHHHHHHHH
Confidence 2344456666666 89999998876543 45 89999999998 899999999999
Q ss_pred HHHHCCC----HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC-----CHHHHHHHHHHhhccCCHHHHHHHHHHHH
Q 019734 226 RAAEGGY----VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-----HGKAQLEHGLGLFTEGEMMKAVVYLELAT 296 (336)
Q Consensus 226 ~a~~~~~----~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~-----~~~a~~~lg~~~~~~~~~~~A~~~~~~A~ 296 (336)
++....+ ..+++++|.++.... ++++|+.||++++... .+++.+++|.++.++|+.++|...|+++.
T Consensus 160 ~a~~~~d~~~~~~a~~~LG~al~~LG----~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~ 235 (282)
T 4f3v_A 160 SAGKWPDKFLAGAAGVAHGVAAANLA----LFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQ 235 (282)
T ss_dssp TGGGCSCHHHHHHHHHHHHHHHHHTT----CHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HhhccCCcccHHHHHHHHHHHHHHCC----CHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 8866543 358999999996533 9999999999998643 34688999999999999999999999999
Q ss_pred HcCcH
Q 019734 297 RAGET 301 (336)
Q Consensus 297 ~~~~~ 301 (336)
...+.
T Consensus 236 a~~P~ 240 (282)
T 4f3v_A 236 TTHPE 240 (282)
T ss_dssp HHSCC
T ss_pred hcCCc
Confidence 87654
No 110
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.30 E-value=5.9e-11 Score=98.82 Aligned_cols=121 Identities=21% Similarity=0.202 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHH
Q 019734 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGIS 178 (336)
Q Consensus 101 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~ 178 (336)
+..++.+|.++.. .+++++|+.+|++++. .++.+++.+|.+|...|++++|+.+|+++++. +++.+++++|.+
T Consensus 6 ~~~~~~~g~~~~~----~~~~~~A~~~~~~a~~-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~ 80 (213)
T 1hh8_A 6 AISLWNEGVLAAD----KKDWKGALDAFSAVQD-PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 80 (213)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHTSSS-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----hCCHHHHHHHHHHHcC-CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 4456778888877 5788888888888863 36788888888888888888888888888754 566777777777
Q ss_pred HHH----HHHHHHHHHHHHcC--C----------------HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC
Q 019734 179 YLQ----EEAVKLLYQASIAG--H----------------VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230 (336)
Q Consensus 179 ~~~----~~A~~~~~ka~~~~--~----------------~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~ 230 (336)
|.. ++|+.+|+++++.. + +.+++++|.+|.. .+++++|+.+|+++++.
T Consensus 81 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 150 (213)
T 1hh8_A 81 YYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK----KEEWKKAEEQLALATSM 150 (213)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTT
T ss_pred HHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH----ccCHHHHHHHHHHHHHc
Confidence 766 66666666666531 1 2555556655555 55556666665555543
No 111
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.30 E-value=7.4e-11 Score=103.90 Aligned_cols=120 Identities=8% Similarity=-0.060 Sum_probs=86.8
Q ss_pred HHHHHhcCCChhHHhhhHHHHHHHHHhCCCC----CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----CC----
Q 019734 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLR----EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----GS---- 136 (336)
Q Consensus 69 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~~---- 136 (336)
+..+...+..|++++|...+.+.++..+... ....++.+|.++.. .+++++|+.+|++|+.. .+
T Consensus 79 ~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~ 154 (293)
T 2qfc_A 79 KDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLK----KVDYEYCILELKKLLNQQLTGIDVYQN 154 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHT----SSCHHHHHHHHHHHHTTCCCSSCTTHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHHhcCCchHHH
Confidence 4566667789999999998888887755421 22456778888877 57999999999999964 11
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-----CCH----HHHHHHHHHHHH----HHHHHHHHHHH
Q 019734 137 TLAMVDAGLMYWEMDKKEAAISLYRQAAVL-----GDP----AGQFNLGISYLQ----EEAVKLLYQAS 192 (336)
Q Consensus 137 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-----~~~----~a~~~Lg~~~~~----~~A~~~~~ka~ 192 (336)
..+++.+|.+|...|++++|+.+|+++++. ++. .+++++|.+|.. ++|+.+|++++
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal 223 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHH
Confidence 568899999999999999999999999832 221 344555555544 44444444443
No 112
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.29 E-value=1e-10 Score=102.93 Aligned_cols=159 Identities=13% Similarity=-0.005 Sum_probs=85.2
Q ss_pred HHhcCCChhHHhhhHHHHHHHHHhCCCCC----HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----CC----HHH
Q 019734 72 IAASFTLPQLRAASLVCKSWNDALRPLRE----AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----GS----TLA 139 (336)
Q Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~~----~~a 139 (336)
+...+..+++++|...+.+..+..+..++ ...++.+|.++.. .+++++|+.+|++|+.. .+ ..+
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~ 157 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLK----KVDYEYCILELKKLLNQQLTGIDVYQNLYI 157 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTT----SSCHHHHHHHHHHHHHTCCCCSCTTHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHc----ccCHHHHHHHHHHHHHHhcccccHHHHHHH
Confidence 34444555555555555555443322111 1122234554443 34555555555555542 11 224
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCc
Q 019734 140 MVDAGLMYWEMDKKEAAISLYRQAAVL-----GDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214 (336)
Q Consensus 140 ~~~lg~~~~~~~~~~~A~~~~~~a~~~-----~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~ 214 (336)
+.++|.+|...|++++|+.+|+++++. ++. .....+++++|.+|.. .
T Consensus 158 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~------------------------~~~~~~~~nlg~~y~~----~ 209 (293)
T 3u3w_A 158 ENAIANIYAENGYLKKGIDLFEQILKQLEALHDNE------------------------EFDVKVRYNHAKALYL----D 209 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCH------------------------HHHHHHHHHHHHHHHH----T
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccch------------------------hHHHHHHHHHHHHHHH----H
Confidence 555555555555555555555555421 010 0123466777777776 6
Q ss_pred cCHHHHHHHHHHHHHC----C----CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHH
Q 019734 215 FNLQEAARWYLRAAEG----G----YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 265 (336)
Q Consensus 215 ~~~~~A~~~~~~a~~~----~----~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~ 265 (336)
+++++|+.+++++++. + .+.+++++|.+|.... +++++|+.+|++|+.
T Consensus 210 ~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g---~~~~~A~~~~~~Al~ 265 (293)
T 3u3w_A 210 SRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE---YEEAEIEDAYKKASF 265 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTT---CCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhC---CcHHHHHHHHHHHHH
Confidence 7778888877777542 1 2677778888876522 146788888888775
No 113
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.28 E-value=1.4e-10 Score=96.48 Aligned_cols=127 Identities=19% Similarity=0.143 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccC
Q 019734 137 TLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 216 (336)
Q Consensus 137 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~ 216 (336)
...++.+|.++...|++++|+..|+++++. ++.+++++|.+|.. .++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~lg~~~~~--------------------------------~g~ 52 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAVQDP-HSRICFNIGCMYTI--------------------------------LKN 52 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSSSC-CHHHHHHHHHHHHH--------------------------------TTC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHcCC-ChHHHHHHHHHHHH--------------------------------cCC
Confidence 345678888888888888888888887633 55555555555544 455
Q ss_pred HHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC------------------CHHHHHHHH
Q 019734 217 LQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG------------------HGKAQLEHG 276 (336)
Q Consensus 217 ~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~------------------~~~a~~~lg 276 (336)
+++|+.+|++++. +.++.+++++|.+|.... ++++|+.+|++++... .+.+++++|
T Consensus 53 ~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~----~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (213)
T 1hh8_A 53 MTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTE----KYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIA 128 (213)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHHHcc----cHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHH
Confidence 5555555555543 345555666666654422 5666666666665531 136778888
Q ss_pred HHhhccCCHHHHHHHHHHHHHcCc
Q 019734 277 LGLFTEGEMMKAVVYLELATRAGE 300 (336)
Q Consensus 277 ~~~~~~~~~~~A~~~~~~A~~~~~ 300 (336)
.+|...|++++|..+|+++++..+
T Consensus 129 ~~~~~~g~~~~A~~~~~~al~~~p 152 (213)
T 1hh8_A 129 FMYAKKEEWKKAEEQLALATSMKS 152 (213)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHccCHHHHHHHHHHHHHcCc
Confidence 888888888888888888887654
No 114
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.27 E-value=1.5e-11 Score=112.98 Aligned_cols=226 Identities=10% Similarity=-0.025 Sum_probs=105.7
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc-CCHHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR-GSTLAMVDAGL 145 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~-~~~~a~~~lg~ 145 (336)
.....+......|++.+|+..|.+. +++.++..++..+.. .+++++|+.+++.+.+. .++.....|+.
T Consensus 34 vWs~La~A~l~~g~~~eAIdsfika-------~D~~~y~~V~~~ae~----~g~~EeAi~yl~~ark~~~~~~i~~~Li~ 102 (449)
T 1b89_A 34 VWSQLAKAQLQKGMVKEAIDSYIKA-------DDPSSYMEVVQAANT----SGNWEELVKYLQMARKKARESYVETELIF 102 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHcC-------CCHHHHHHHHHHHHh----CCCHHHHHHHHHHHHHhCccchhHHHHHH
Confidence 3345555667778888887666542 255577777776665 57888888888877764 34566777888
Q ss_pred HHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHH
Q 019734 146 MYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 221 (336)
Q Consensus 146 ~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~ 221 (336)
+|.+.|+++++..+++. .+..++..+|..+.. ++|+.+|.++ ..+..||.|+.. .+++++|+
T Consensus 103 ~Y~Klg~l~e~e~f~~~----pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a------~n~~~LA~~L~~----Lg~yq~AV 168 (449)
T 1b89_A 103 ALAKTNRLAELEEFING----PNNAHIQQVGDRCYDEKMYDAAKLLYNNV------SNFGRLASTLVH----LGEYQAAV 168 (449)
T ss_dssp ------CHHHHTTTTTC----C----------------CTTTHHHHHHHT------TCHHHHHHHHHT----TTCHHHHH
T ss_pred HHHHhCCHHHHHHHHcC----CcHHHHHHHHHHHHHcCCHHHHHHHHHHh------hhHHHHHHHHHH----hccHHHHH
Confidence 88888888888777753 344588888888887 8899999877 467888999888 88899999
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC--
Q 019734 222 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG-- 299 (336)
Q Consensus 222 ~~~~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~-- 299 (336)
+.|+++ +++..|-.+..++.... +++.|..+... +. -+++-...+..+|.+.|.+++|+.+++.++...
T Consensus 169 ea~~KA---~~~~~Wk~v~~aCv~~~----ef~lA~~~~l~-L~-~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~a 239 (449)
T 1b89_A 169 DGARKA---NSTRTWKEVCFACVDGK----EFRLAQMCGLH-IV-VHADELEELINYYQDRGYFEELITMLEAALGLERA 239 (449)
T ss_dssp HHHHHH---TCHHHHHHHHHHHHHTT----CHHHHHHTTTT-TT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTC
T ss_pred HHHHHc---CCchhHHHHHHHHHHcC----cHHHHHHHHHH-HH-hCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHH
Confidence 999988 57888888777775533 88888666664 22 456666678888999999999999999998764
Q ss_pred cHHHHHHHHHHHhhcChhcHHHHHHHH
Q 019734 300 ETAADHVKNVILQQLSATSRDRAMLVV 326 (336)
Q Consensus 300 ~~~a~~~~~~~~~~~~~~~~~~a~~~~ 326 (336)
+...-..++.++....++...++....
T Consensus 240 h~~~ftel~il~~ky~p~k~~ehl~~~ 266 (449)
T 1b89_A 240 HMGMFTELAILYSKFKPQKMREHLELF 266 (449)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 567777788888887777666665544
No 115
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.27 E-value=2.4e-10 Score=86.80 Aligned_cols=127 Identities=21% Similarity=0.282 Sum_probs=76.0
Q ss_pred HHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 019734 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISY 179 (336)
Q Consensus 102 ~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~ 179 (336)
.+++.+|.++.. .+++++|+.+|++++.. .+..+++.+|.++...|++++|+.+|++++...
T Consensus 2 ~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------------ 65 (136)
T 2fo7_A 2 EAWYNLGNAYYK----QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD------------ 65 (136)
T ss_dssp HHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------------
T ss_pred cHHHHHHHHHHH----cCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC------------
Confidence 345666666666 46667777777766654 356666666666666666666666666665431
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHH
Q 019734 180 LQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQAR 257 (336)
Q Consensus 180 ~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~ 257 (336)
..++.+++.+|.++.. .+++++|+.++++++.. .+..+++.+|.++... +++++|.
T Consensus 66 --------------~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~----~~~~~A~ 123 (136)
T 2fo7_A 66 --------------PRSAEAWYNLGNAYYK----QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ----GDYDEAI 123 (136)
T ss_dssp --------------TTCHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT----TCHHHHH
T ss_pred --------------CCchHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH----ccHHHHH
Confidence 1234445555555555 56666666666666443 4566666666666542 2666666
Q ss_pred HHHHHHHHc
Q 019734 258 KWMKRAADC 266 (336)
Q Consensus 258 ~~~~~a~~~ 266 (336)
.++++++..
T Consensus 124 ~~~~~~~~~ 132 (136)
T 2fo7_A 124 EYYQKALEL 132 (136)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHcc
Confidence 666666553
No 116
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.26 E-value=3.5e-12 Score=117.21 Aligned_cols=221 Identities=10% Similarity=0.017 Sum_probs=86.7
Q ss_pred CChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHH
Q 019734 77 TLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156 (336)
Q Consensus 77 ~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A 156 (336)
..|++++|. .+.+.. +++.+|..||.++.. .+++++|+..|.++ .++.++..++..+...|++++|
T Consensus 15 ~~~~ld~A~----~fae~~---~~~~vWs~La~A~l~----~g~~~eAIdsfika---~D~~~y~~V~~~ae~~g~~EeA 80 (449)
T 1b89_A 15 HIGNLDRAY----EFAERC---NEPAVWSQLAKAQLQ----KGMVKEAIDSYIKA---DDPSSYMEVVQAANTSGNWEEL 80 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HccCHHHHH----HHHHhC---CChHHHHHHHHHHHH----cCCHHHHHHHHHcC---CCHHHHHHHHHHHHhCCCHHHH
Confidence 446788885 444443 356799999999999 58999999999875 6788999999999999999999
Q ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHH----HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCC
Q 019734 157 ISLYRQAAVL-GDPAGQFNLGISYLQ----EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 231 (336)
Q Consensus 157 ~~~~~~a~~~-~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~ 231 (336)
+.+++.+.+. .++.....|+.+|.. .++..+|+. .+..++..+|..|.. .+.+++|+.+|.++
T Consensus 81 i~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~----pn~~a~~~IGd~~~~----~g~yeeA~~~Y~~a---- 148 (449)
T 1b89_A 81 VKYLQMARKKARESYVETELIFALAKTNRLAELEEFING----PNNAHIQQVGDRCYD----EKMYDAAKLLYNNV---- 148 (449)
T ss_dssp ----------------------------CHHHHTTTTTC----C--------------------CTTTHHHHHHHT----
T ss_pred HHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcC----CcHHHHHHHHHHHHH----cCCHHHHHHHHHHh----
Confidence 9999998865 455666778888876 556666642 455699999999998 89999999999987
Q ss_pred CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcHHHHHHHHHHH
Q 019734 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 311 (336)
Q Consensus 232 ~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~a~~~~~~~~ 311 (336)
..+..|+.++.+.. ++++|++.|+++ +++..+..++.++...|+++.|..+... +...+.+.. ..+.
T Consensus 149 --~n~~~LA~~L~~Lg----~yq~AVea~~KA---~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~l~---~lv~ 215 (449)
T 1b89_A 149 --SNFGRLASTLVHLG----EYQAAVDGARKA---NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADELE---ELIN 215 (449)
T ss_dssp --TCHHHHHHHHHTTT----CHHHHHHHHHHH---TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHHHH---HHHH
T ss_pred --hhHHHHHHHHHHhc----cHHHHHHHHHHc---CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhhHH---HHHH
Confidence 57889999997644 999999999999 5899999999999999999999777665 222222322 3333
Q ss_pred hhcChhcHHHHHHHHHHhhcCCCCC
Q 019734 312 QQLSATSRDRAMLVVDSWRAMPSLH 336 (336)
Q Consensus 312 ~~~~~~~~~~a~~~~~~~~~~~~~~ 336 (336)
.+...+..+++..+.+.-..+.+.|
T Consensus 216 ~Yek~G~~eEai~lLe~aL~le~ah 240 (449)
T 1b89_A 216 YYQDRGYFEELITMLEAALGLERAH 240 (449)
T ss_dssp HHHHTTCHHHHHHHHHHHTTSTTCC
T ss_pred HHHHCCCHHHHHHHHHHHhCCcHHH
Confidence 3455678888988888888777766
No 117
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.26 E-value=2.3e-11 Score=109.61 Aligned_cols=132 Identities=16% Similarity=0.102 Sum_probs=82.9
Q ss_pred hhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CC---------------HHHHH
Q 019734 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GS---------------TLAMV 141 (336)
Q Consensus 79 ~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~---------------~~a~~ 141 (336)
.++.+|...+....+..+. .+.+++.+|.+|.. .+++++|+.+|++|+.. .+ ..+++
T Consensus 127 ~~~~~A~~~~~~a~~~~p~--~a~~~~~~g~~~~~----~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~ 200 (336)
T 1p5q_A 127 KSFEKAKESWEMNSEEKLE--QSTIVKERGTVYFK----EGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHL 200 (336)
T ss_dssp EEEECCCCGGGCCHHHHHH--HHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHH
T ss_pred eecccccchhcCCHHHHHH--HHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHH
Confidence 3344454444444443333 56777778888777 57888888888888775 23 46777
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCC
Q 019734 142 DAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGV 213 (336)
Q Consensus 142 ~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~ 213 (336)
++|.+|...|++++|+.+|+++++. +++.+++++|.+|.. ++|+.+|+++++. ++..++.++|.++..
T Consensus 201 nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~---- 276 (336)
T 1p5q_A 201 NLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR---- 276 (336)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----
Confidence 7777777777777777777777654 456666666666665 5555555555543 355555555555554
Q ss_pred ccCHHHH
Q 019734 214 DFNLQEA 220 (336)
Q Consensus 214 ~~~~~~A 220 (336)
.+++++|
T Consensus 277 ~~~~~~a 283 (336)
T 1p5q_A 277 IRRQLAR 283 (336)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4445444
No 118
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.26 E-value=4.9e-10 Score=98.58 Aligned_cols=93 Identities=12% Similarity=0.036 Sum_probs=76.3
Q ss_pred HHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH----C-C----CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--
Q 019734 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAE----G-G----YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC-- 266 (336)
Q Consensus 198 ~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~----~-~----~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~-- 266 (336)
.++.++|.+|.. .+++++|+.+|+++++ . + ...+++++|.+|.... ++++|+.+++++++.
T Consensus 156 ~~~~~lg~~y~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~----~y~~A~~~~~~al~~~~ 227 (293)
T 3u3w_A 156 YIENAIANIYAE----NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDS----RYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHH
Confidence 357778888877 7889999999999874 1 2 3457899999997633 999999999999873
Q ss_pred --C----CHHHHHHHHHHhhccC-CHHHHHHHHHHHHHc
Q 019734 267 --G----HGKAQLEHGLGLFTEG-EMMKAVVYLELATRA 298 (336)
Q Consensus 267 --~----~~~a~~~lg~~~~~~~-~~~~A~~~~~~A~~~ 298 (336)
+ .+.+++++|.+|...| ++++|..+|++|+..
T Consensus 228 ~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 228 RINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 1 1678899999999999 579999999999863
No 119
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.25 E-value=4.8e-10 Score=85.09 Aligned_cols=129 Identities=22% Similarity=0.287 Sum_probs=99.9
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCH
Q 019734 138 LAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 217 (336)
Q Consensus 138 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~ 217 (336)
.+++.+|.++...|++++|+.+|+++++.. ..+..+++.+|.++.. .+++
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--------------------------~~~~~~~~~~a~~~~~----~~~~ 51 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELD--------------------------PRSAEAWYNLGNAYYK----QGDY 51 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------------------------TTCHHHHHHHHHHHHH----HTCH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcC--------------------------CcchhHHHHHHHHHHH----hcCH
Confidence 456677777777777777777777665421 2344555666666666 6889
Q ss_pred HHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHH
Q 019734 218 QEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLE 293 (336)
Q Consensus 218 ~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~ 293 (336)
++|+.+|++++. +.+..+++.+|.++... +++++|+.++++++.. .+...++.+|.++...|++++|..+|+
T Consensus 52 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 127 (136)
T 2fo7_A 52 DEAIEYYQKALELDPRSAEAWYNLGNAYYKQ----GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQ 127 (136)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT----TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHHh----cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHH
Confidence 999999999865 46788899999999653 3999999999999875 457888999999999999999999999
Q ss_pred HHHHcCc
Q 019734 294 LATRAGE 300 (336)
Q Consensus 294 ~A~~~~~ 300 (336)
+++...+
T Consensus 128 ~~~~~~~ 134 (136)
T 2fo7_A 128 KALELDP 134 (136)
T ss_dssp HHHHHST
T ss_pred HHHccCC
Confidence 9987643
No 120
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.24 E-value=1.6e-10 Score=88.67 Aligned_cols=109 Identities=15% Similarity=0.181 Sum_probs=76.6
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
.+.++..||.++.. .+++++|+.+|++|++. .++.+++++|.+|...|++++|+..|+++++. .+...+..+
T Consensus 7 ~A~a~~~lG~~~~~----~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 82 (127)
T 4gcn_A 7 AAIAEKDLGNAAYK----QKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLI 82 (127)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHH
Confidence 45677788888888 58888888888888876 47888888888888888888888888888754 222222222
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC-CCHHHHH
Q 019734 176 GISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG-GYVRAMY 237 (336)
Q Consensus 176 g~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~-~~~~a~~ 237 (336)
..+++++|.+|.. .+++++|+.+|++++.. .+++...
T Consensus 83 ---------------------a~~~~~lg~~~~~----~~~~~~A~~~~~kal~~~~~~~~~~ 120 (127)
T 4gcn_A 83 ---------------------AKAMSRAGNAFQK----QNDLSLAVQWFHRSLSEFRDPELVK 120 (127)
T ss_dssp ---------------------HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHSCCHHHHH
T ss_pred ---------------------HHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCcCHHHHH
Confidence 2345567777776 67777787777777653 3444433
No 121
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.22 E-value=2.1e-10 Score=94.45 Aligned_cols=85 Identities=16% Similarity=0.130 Sum_probs=62.4
Q ss_pred CCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----C----CHHHHHHHHHHH
Q 019734 76 FTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----G----STLAMVDAGLMY 147 (336)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~----~~~a~~~lg~~~ 147 (336)
+..|++.+|...+..+. ..+ ...+.+++.+|.++.. .+++++|+.+|++++.. + ...+++.+|.++
T Consensus 3 ~~~g~~~~A~~~~~~~~-~~~-~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~ 76 (203)
T 3gw4_A 3 FEAHDYALAERQAQALL-AHP-ATASGARFMLGYVYAF----MDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVE 76 (203)
T ss_dssp ----CHHHHHHHHHHHH-TST-TTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhc-CCh-HHHHHHHHHHHHHHHH----hCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 56788888876433332 222 2468889999999988 58999999999998873 2 356788999999
Q ss_pred hcCCCHHHHHHHHHHHHHc
Q 019734 148 WEMDKKEAAISLYRQAAVL 166 (336)
Q Consensus 148 ~~~~~~~~A~~~~~~a~~~ 166 (336)
...|++++|+.+|+++++.
T Consensus 77 ~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 77 RMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHH
Confidence 9999999999999988754
No 122
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.21 E-value=1.9e-11 Score=110.15 Aligned_cols=158 Identities=14% Similarity=0.120 Sum_probs=115.0
Q ss_pred CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 019734 119 KNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQEEAVKLLYQASIA 194 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~~~A~~~~~ka~~~ 194 (336)
.++++|+.+|++++.. .++.+++.+|.+++..|++++|+.+|+++++. .+...- .+.+. .+..
T Consensus 127 ~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~--------~~~~~-----~~~~ 193 (336)
T 1p5q_A 127 KSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFS--------NEEAQ-----KAQA 193 (336)
T ss_dssp EEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCC--------SHHHH-----HHHH
T ss_pred eecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCC--------hHHHH-----HHHH
Confidence 5677888888887754 46889999999999999999999999999865 221000 00000 0111
Q ss_pred CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHH
Q 019734 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGK 270 (336)
Q Consensus 195 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~ 270 (336)
....+++++|.+|.. .+++++|+.+|+++++ +.++.+++++|.+|.... ++++|+.+|++++.. ++..
T Consensus 194 ~~~~~~~nla~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g----~~~~A~~~~~~al~l~P~~~~ 265 (336)
T 1p5q_A 194 LRLASHLNLAMCHLK----LQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVN----DFELARADFQKVLQLYPNNKA 265 (336)
T ss_dssp HHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHCSSCHH
T ss_pred HHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHCCCCHH
Confidence 124667778888777 7888888888888865 467888888888886533 888888888888874 5677
Q ss_pred HHHHHHHHhhccCCHHHH-HHHHHHHHH
Q 019734 271 AQLEHGLGLFTEGEMMKA-VVYLELATR 297 (336)
Q Consensus 271 a~~~lg~~~~~~~~~~~A-~~~~~~A~~ 297 (336)
++.+||.++...|++++| ...|++.+.
T Consensus 266 a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 266 AKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888888888 456666654
No 123
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.21 E-value=7.1e-10 Score=87.99 Aligned_cols=90 Identities=13% Similarity=0.101 Sum_probs=62.4
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
.+..++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|.++++. .++.+++.+
T Consensus 12 ~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 87 (166)
T 1a17_A 12 RAEELKTQANDYFK----AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 35667777877777 57888888888887775 46777888888888888888888888777654 455666666
Q ss_pred HHHHHH----HHHHHHHHHHHH
Q 019734 176 GISYLQ----EEAVKLLYQASI 193 (336)
Q Consensus 176 g~~~~~----~~A~~~~~ka~~ 193 (336)
|.++.. ++|+.+|+++++
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHH
Confidence 666554 555555555544
No 124
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.20 E-value=2.7e-10 Score=87.46 Aligned_cols=96 Identities=16% Similarity=0.169 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCC-----
Q 019734 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH----- 268 (336)
Q Consensus 196 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~----- 268 (336)
.+.++.+||..+.. .+++++|+.+|++|++ +.++.+++++|.+|... +++++|+.+|+++++..+
T Consensus 7 ~A~a~~~lG~~~~~----~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~----~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 7 AAIAEKDLGNAAYK----QKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEE----KKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHh----hhHHHHHHHHHHHHHhCcccchh
Confidence 35678899999998 8999999999999965 57899999999999763 399999999999987421
Q ss_pred ----HHHHHHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 269 ----GKAQLEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 269 ----~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
..+++++|.++...|++++|+.+|++++...
T Consensus 79 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 79 YKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 3578999999999999999999999999753
No 125
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.20 E-value=2.8e-10 Score=89.87 Aligned_cols=105 Identities=14% Similarity=0.006 Sum_probs=91.2
Q ss_pred HHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHH
Q 019734 187 LLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262 (336)
Q Consensus 187 ~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~ 262 (336)
.|+++++. ++..+++++|.++.. .+++++|+..|++++. +.++.+++++|.+|... +++++|+.+|++
T Consensus 9 ~~~~al~~~p~~~~~~~~~g~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~----g~~~~A~~~~~~ 80 (148)
T 2vgx_A 9 TIAMLNEISSDTLEQLYSLAFNQYQ----SGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAM----GQYDLAIHSYSY 80 (148)
T ss_dssp SHHHHTTCCHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHHHHHHHHH
T ss_pred hHHHHHcCCHhhHHHHHHHHHHHHH----cCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHH----hhHHHHHHHHHH
Confidence 46666655 367788999999988 8999999999999964 57899999999999753 399999999999
Q ss_pred HHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 263 AADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 263 a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
++.. +++.+++++|.+|...|++++|..+|+++++..
T Consensus 81 al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 81 GAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELI 119 (148)
T ss_dssp HHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 9875 678999999999999999999999999999863
No 126
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.20 E-value=1.2e-10 Score=102.19 Aligned_cols=181 Identities=15% Similarity=0.096 Sum_probs=113.5
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
++.+++.+|.++.. .+++++|+.+|++++.. .++.+++++|.+|...|++++|+..|+++++. +++.+++++
T Consensus 3 ~a~~~~~~g~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 78 (281)
T 2c2l_A 3 SAQELKEQGNRLFV----GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFL 78 (281)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 56778888888887 57888888888888876 47888888888888888888888888888764 677788888
Q ss_pred HHHHHH----HHHHHHHHHHHHcC--CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCC
Q 019734 176 GISYLQ----EEAVKLLYQASIAG--HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA--EGGYVRAMYNTSLCYSFGE 247 (336)
Q Consensus 176 g~~~~~----~~A~~~~~ka~~~~--~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~--~~~~~~a~~~lg~~~~~~~ 247 (336)
|.+|.. ++|+.+|+++++.+ ++..+..+..... ...++..|..... ...+......++.++.
T Consensus 79 g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~--- 148 (281)
T 2c2l_A 79 GQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSAL-------RIAKKKRWNSIEERRIHQESELHSYLTRLIA--- 148 (281)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHH-------HHHHHHHHHHHHHTCCCCCCHHHHHHHHHHH---
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHH-------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH---
Confidence 888777 77777777776532 1100000000000 1122223332222 2244555555666553
Q ss_pred CCcccHHHHHHHHHHHHHcCC--HHHHHHHHHHhhcc-CCHHHHHHHHHHHHH
Q 019734 248 GLPLSHRQARKWMKRAADCGH--GKAQLEHGLGLFTE-GEMMKAVVYLELATR 297 (336)
Q Consensus 248 g~~~~~~~A~~~~~~a~~~~~--~~a~~~lg~~~~~~-~~~~~A~~~~~~A~~ 297 (336)
+++++|+..|+++++.++ ......++.++... +.+++|...|.++.+
T Consensus 149 ---~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a~~ 198 (281)
T 2c2l_A 149 ---AERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDE 198 (281)
T ss_dssp ---HHHHHHHTTTSGGGTTTSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred ---HHHHHHHHHHHhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 277777777777776543 23334444444443 566777777776654
No 127
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.19 E-value=7.8e-11 Score=93.06 Aligned_cols=77 Identities=17% Similarity=0.113 Sum_probs=42.1
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
++.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|++++.. +++.+++++
T Consensus 20 ~~~~~~~~g~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l 95 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQ----SGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHA 95 (148)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHH
T ss_pred hHHHHHHHHHHHHH----cCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHH
Confidence 44555556665555 35666666666665554 35556666666666666666666665555532 344444444
Q ss_pred HHHHH
Q 019734 176 GISYL 180 (336)
Q Consensus 176 g~~~~ 180 (336)
|.+|.
T Consensus 96 g~~~~ 100 (148)
T 2vgx_A 96 AECLL 100 (148)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 128
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.19 E-value=1.6e-10 Score=101.42 Aligned_cols=182 Identities=13% Similarity=0.021 Sum_probs=131.0
Q ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHH
Q 019734 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCL 207 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~ 207 (336)
++.+++.+|..+...|++++|+.+|.++++. .++.+++++|.+|.. ++|+.+|+++++. +++.+++++|.+|
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 5678999999999999999999999999865 789999999999998 9999999999875 6899999999999
Q ss_pred hcCCCCccCHHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHH--cCCHHHHHHHHHHhhccC
Q 019734 208 HRGRGVDFNLQEAARWYLRAAEGG--YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD--CGHGKAQLEHGLGLFTEG 283 (336)
Q Consensus 208 ~~g~g~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~ 283 (336)
.. .+++++|+.+|+++++.. +...+..+..... ...++..|...... ..++.....++.++ .|
T Consensus 83 ~~----~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~--~~ 149 (281)
T 2c2l_A 83 LE----MESYDEAIANLQRAYSLAKEQRLNFGDDIPSAL-------RIAKKKRWNSIEERRIHQESELHSYLTRLI--AA 149 (281)
T ss_dssp HH----TTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHH-------HHHHHHHHHHHHHTCCCCCCHHHHHHHHHH--HH
T ss_pred HH----cCCHHHHHHHHHHHHHhCccchhhHHHHHHHHH-------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHH--HH
Confidence 98 899999999999997542 2111111111111 23344455554443 24566666777654 79
Q ss_pred CHHHHHHHHHHHHHcCcHHHHHHHH--HHHhhcChhcHHHHHHHHHHhhc
Q 019734 284 EMMKAVVYLELATRAGETAADHVKN--VILQQLSATSRDRAMLVVDSWRA 331 (336)
Q Consensus 284 ~~~~A~~~~~~A~~~~~~~a~~~~~--~~~~~~~~~~~~~a~~~~~~~~~ 331 (336)
++++|+..|++|++..+.+...... .+... .....+++.+++.+..+
T Consensus 150 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~~a~~~f~~a~~ 198 (281)
T 2c2l_A 150 ERERELEECQRNHEGHEDDGHIRAQQACIEAK-HDKYMADMDELFSQVDE 198 (281)
T ss_dssp HHHHHHTTTSGGGTTTSCHHHHTHHHHHHHHH-HHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHhhhccccchhhhhhHHHHHHHH-HHHHHHHHHHHHHhhhc
Confidence 9999999999999886544332222 22111 22345567777766554
No 129
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.16 E-value=1.6e-09 Score=88.94 Aligned_cols=149 Identities=17% Similarity=0.036 Sum_probs=107.5
Q ss_pred cCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHHHHH
Q 019734 118 RKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL----GDPAGQFNLGISYLQEEAVKLLYQA 191 (336)
Q Consensus 118 ~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~~~~a~~~Lg~~~~~~~A~~~~~ka 191 (336)
.+++++|...++..... ....++..+|.++...|++++|+.+|+++++. ++..
T Consensus 5 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~--------------------- 63 (203)
T 3gw4_A 5 AHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHT--------------------- 63 (203)
T ss_dssp --CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHH---------------------
T ss_pred cccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcH---------------------
Confidence 46889999855544332 35678889999999999999999999888752 1211
Q ss_pred HHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----C-C----HHHHHHHHHHHHcCCCCcccHHHHHHHHHH
Q 019734 192 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----G-Y----VRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262 (336)
Q Consensus 192 ~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~-~----~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~ 262 (336)
....++.++|.+|.. .+++++|+.+|+++++. + + ..+++++|.++.. .+++++|..++++
T Consensus 64 ---~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~ 132 (203)
T 3gw4_A 64 ---AEHRALHQVGMVERM----AGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALH----FGDLAGARQEYEK 132 (203)
T ss_dssp ---HHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHH
Confidence 123456667777776 67888888888887653 2 2 4567788888865 2388889888888
Q ss_pred HHHc----CCH----HHHHHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 263 AADC----GHG----KAQLEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 263 a~~~----~~~----~a~~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
++.. +++ .++.++|.++...|++++|..+++++++.
T Consensus 133 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 176 (203)
T 3gw4_A 133 SLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDI 176 (203)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 8752 333 34589999999999999999999999863
No 130
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.16 E-value=1.6e-08 Score=90.13 Aligned_cols=233 Identities=9% Similarity=-0.109 Sum_probs=180.6
Q ss_pred CChhHH-hhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCC-CC-----cCCHHHHHHHHHHHHHc--CCHHHHHHHHHHH
Q 019734 77 TLPQLR-AASLVCKSWNDALRPLREAMVLLRWGKRFKHGR-GV-----RKNLDKALDSFLKGAAR--GSTLAMVDAGLMY 147 (336)
Q Consensus 77 ~~~~~~-~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~-g~-----~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~ 147 (336)
..|.+. +|..++...+...|+ +..+|+..+.+..... .. ...+++++.++..++.. .+..+|+..+.++
T Consensus 41 ~~~e~s~eaL~~t~~~L~~nP~--~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL 118 (331)
T 3dss_A 41 QAGELDESVLELTSQILGANPD--FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLL 118 (331)
T ss_dssp HTTCCSHHHHHHHHHHHTTCTT--CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHCch--hHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 445554 788888888888777 8899999998887620 00 01168999999999986 4899999999999
Q ss_pred hcCC--CHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH-----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCC----
Q 019734 148 WEMD--KKEAAISLYRQAAVL--GDPAGQFNLGISYLQ-----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRG---- 212 (336)
Q Consensus 148 ~~~~--~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~-----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g---- 212 (336)
...+ ++++++.++.++++. .+..|+.+.+.++.. ++++.++.++++. .+..|+++.+.++..-..
T Consensus 119 ~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~ 198 (331)
T 3dss_A 119 SRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDS 198 (331)
T ss_dssp HHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC--
T ss_pred hccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhcccc
Confidence 9888 589999999999865 789999999999877 7999999999876 589999999988764210
Q ss_pred ------CccCHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCCCCc-------ccHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 213 ------VDFNLQEAARWYLRAA--EGGYVRAMYNTSLCYSFGEGLP-------LSHRQARKWMKRAADC--GHGKAQLEH 275 (336)
Q Consensus 213 ------~~~~~~~A~~~~~~a~--~~~~~~a~~~lg~~~~~~~g~~-------~~~~~A~~~~~~a~~~--~~~~a~~~l 275 (336)
..+.+++++.++.+++ ++++..+++.+..++....|.. .-++++++++++.++. ++...+..+
T Consensus 199 ~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~pd~~w~l~~~ 278 (331)
T 3dss_A 199 GPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEPENKWCLLTI 278 (331)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCcccchHHHHH
Confidence 1156889999999996 5689999998888887775532 3578999999999885 444444333
Q ss_pred HHHh---hccCCHHHHHHHHHHHHHcCcHHHHHHHHHHH
Q 019734 276 GLGL---FTEGEMMKAVVYLELATRAGETAADHVKNVIL 311 (336)
Q Consensus 276 g~~~---~~~~~~~~A~~~~~~A~~~~~~~a~~~~~~~~ 311 (336)
..+. ...+..++...|+.+.++.++...-.+.....
T Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~l~~~Dp~r~~~y~d~~~ 317 (331)
T 3dss_A 279 ILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRS 317 (331)
T ss_dssp HHHHHHHCTTTTHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHHhhcccccHHHHHHHHHHHHHhCcchhhHHHHHHH
Confidence 3322 23678999999999999999887777665433
No 131
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.16 E-value=1e-09 Score=95.39 Aligned_cols=185 Identities=11% Similarity=0.091 Sum_probs=146.9
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH-------HHHHHH----HHHHHHHHHHHHc-----------
Q 019734 139 AMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL-------GISYLQ----EEAVKLLYQASIA----------- 194 (336)
Q Consensus 139 a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L-------g~~~~~----~~A~~~~~ka~~~----------- 194 (336)
.++..|.-+ ..+|++.|+..|.++++. +.+++|..+ +.++.. .+++..++++++.
T Consensus 9 ~~~~~~~~~-~~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~ 87 (282)
T 4f3v_A 9 SLFESAVSM-LPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAI 87 (282)
T ss_dssp HHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEEC
T ss_pred HHHHHHhcc-cCCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhcc
Confidence 345555555 589999999999999754 889999999 788877 8888889988772
Q ss_pred -C-C----------HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHH
Q 019734 195 -G-H----------VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260 (336)
Q Consensus 195 -~-~----------~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~ 260 (336)
| + .+....++.++.. .+++++|.+.|...... ++. +.+.+|.++... +++++|+..|
T Consensus 88 ~g~y~~~~~~v~~r~dl~LayA~~L~~----~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~----~r~~dA~~~l 158 (282)
T 4f3v_A 88 GGLYGDITYPVTSPLAITMGFAACEAA----QGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAA----ERWTDVIDQV 158 (282)
T ss_dssp CTTTCCCEEECSSHHHHHHHHHHHHHH----HTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHT----TCHHHHHHHH
T ss_pred CCcccccccccCCHhHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHc----CCHHHHHHHH
Confidence 2 1 3556678888887 78999999999988644 345 899999999764 4999999999
Q ss_pred HHHHHcCC----HHHHHHHHHHhhccCCHHHHHHHHHHHHHcC-----cHHHHHHHHHHHhhcChhcHHHHHHHHHHhhc
Q 019734 261 KRAADCGH----GKAQLEHGLGLFTEGEMMKAVVYLELATRAG-----ETAADHVKNVILQQLSATSRDRAMLVVDSWRA 331 (336)
Q Consensus 261 ~~a~~~~~----~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~-----~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 331 (336)
+++....+ ..++++||.++...|++++|+.+|++++... ..++..+++.++.. .++.++|...++++..
T Consensus 159 ~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~--lGr~deA~~~l~~a~a 236 (282)
T 4f3v_A 159 KSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRS--QGNESAAVALLEWLQT 236 (282)
T ss_dssp TTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHH--HTCHHHHHHHHHHHHH
T ss_pred HHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHH--cCCHHHHHHHHHHHHh
Confidence 98876543 3478999999999999999999999999654 23566666666554 5677889999999887
Q ss_pred CCCC
Q 019734 332 MPSL 335 (336)
Q Consensus 332 ~~~~ 335 (336)
..|.
T Consensus 237 ~~P~ 240 (282)
T 4f3v_A 237 THPE 240 (282)
T ss_dssp HSCC
T ss_pred cCCc
Confidence 7763
No 132
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.15 E-value=1.1e-09 Score=83.22 Aligned_cols=95 Identities=13% Similarity=0.014 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHH
Q 019734 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQ 272 (336)
Q Consensus 197 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~ 272 (336)
+.+++.+|..+.. .+++++|+.+|+++++ +.++.+++++|.+|.... ++++|+.+|++++.. .++.++
T Consensus 4 a~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~----~~~~A~~~~~~al~~~p~~~~~~ 75 (126)
T 3upv_A 4 AEEARLEGKEYFT----KSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLM----SFPEAIADCNKAIEKDPNFVRAY 75 (126)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhc----CHHHHHHHHHHHHHhCCCcHHHH
Confidence 5678899999988 8999999999999975 478999999999997633 999999999999985 568899
Q ss_pred HHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 273 LEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 273 ~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
+++|.++...|++++|+.+|+++++..
T Consensus 76 ~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 76 IRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999865
No 133
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1.6e-09 Score=82.39 Aligned_cols=87 Identities=13% Similarity=0.042 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLG 176 (336)
Q Consensus 101 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg 176 (336)
+..++.+|..+.. .+++++|+.+|++++.. .++.+++++|.+|...|++++|+..|+++++. +++.+++.+|
T Consensus 4 a~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg 79 (126)
T 3upv_A 4 AEEARLEGKEYFT----KSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKA 79 (126)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 4566667777666 46777777777777665 35677777777777777777777777776643 4455555555
Q ss_pred HHHHH----HHHHHHHHHH
Q 019734 177 ISYLQ----EEAVKLLYQA 191 (336)
Q Consensus 177 ~~~~~----~~A~~~~~ka 191 (336)
.++.. ++|+.+|+++
T Consensus 80 ~~~~~~~~~~~A~~~~~~a 98 (126)
T 3upv_A 80 TAQIAVKEYASALETLDAA 98 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHH
Confidence 55544 4444444444
No 134
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.13 E-value=8.3e-10 Score=88.26 Aligned_cols=89 Identities=18% Similarity=0.167 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
++.+++.+|.++.. .+++++|+.+|++++.. .++.+++++|.+|...|++++|+.+|+++++. +++.+++++
T Consensus 10 ~a~~~~~~g~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 85 (164)
T 3sz7_A 10 ESDKLKSEGNAAMA----RKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRL 85 (164)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 45666777777766 46777777777777765 46677777777777777777777777776643 445555555
Q ss_pred HHHHHH----HHHHHHHHHHH
Q 019734 176 GISYLQ----EEAVKLLYQAS 192 (336)
Q Consensus 176 g~~~~~----~~A~~~~~ka~ 192 (336)
|.+|.. ++|+.+|++++
T Consensus 86 g~~~~~~g~~~~A~~~~~~al 106 (164)
T 3sz7_A 86 GLARFDMADYKGAKEAYEKGI 106 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHH
Confidence 555544 44444444443
No 135
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.13 E-value=4.2e-10 Score=87.88 Aligned_cols=105 Identities=11% Similarity=-0.043 Sum_probs=88.9
Q ss_pred HHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHH
Q 019734 187 LLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 262 (336)
Q Consensus 187 ~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~ 262 (336)
.|+++++. ++..+++.+|.++.. .+++++|+.+|++++. +.++.+++.+|.+|... +++++|+.+|++
T Consensus 6 ~l~~al~~~p~~~~~~~~~a~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~----g~~~~A~~~~~~ 77 (142)
T 2xcb_A 6 TLAMLRGLSEDTLEQLYALGFNQYQ----AGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSL----GLYEQALQSYSY 77 (142)
T ss_dssp ---CCTTCCHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHHHHHHHHH
T ss_pred hHHHHHcCCHHHHHHHHHHHHHHHH----HccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHH----hhHHHHHHHHHH
Confidence 45555544 356788999999988 8999999999999965 57899999999999763 399999999999
Q ss_pred HHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 263 AADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 263 a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
++.. +++.+++++|.+|...|++++|+.+|+++++..
T Consensus 78 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 78 GALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 9985 678899999999999999999999999999864
No 136
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.13 E-value=8.2e-10 Score=84.08 Aligned_cols=108 Identities=12% Similarity=-0.013 Sum_probs=61.2
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
.....+...+..|++++|...+.+.++..+. ++.+++.+|.+|.. .+++++|+.+|++++.. .++.+++.+|
T Consensus 18 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~--~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 18 MVKNKGNECFQKGDYPQAMKHYTEAIKRNPK--DAKLYSNRAACYTK----LLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp HHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT--CHHHHHHHHHHHTT----TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--cHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 3445555555566666666555555554443 45666666666655 35666666666666554 3455666666
Q ss_pred HHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHH
Q 019734 145 LMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYL 180 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~ 180 (336)
.++...|++++|+.+|+++++. ++..++..++.++.
T Consensus 92 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 129 (133)
T 2lni_A 92 AALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMM 129 (133)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 6666666666666666665543 34455555555543
No 137
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.13 E-value=1e-09 Score=88.68 Aligned_cols=113 Identities=9% Similarity=0.066 Sum_probs=83.4
Q ss_pred cCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHH-HhcCC
Q 019734 75 SFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLM-YWEMD 151 (336)
Q Consensus 75 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~-~~~~~ 151 (336)
.+..|++++|+..+...++..+. ++.+++.+|.+|.. .+++++|+.+|++++.. .++.+++.+|.+ +...|
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~ 93 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQ--NSEQWALLGEYYLW----QNDYSNSLLAYRQALQLRGENAELYAALATVLYYQAS 93 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCS--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTT
T ss_pred hhhccCHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC
Confidence 35678888998888888888766 78899999999988 58999999999998876 578889999998 77888
Q ss_pred CH--HHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHH
Q 019734 152 KK--EAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASI 193 (336)
Q Consensus 152 ~~--~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~ 193 (336)
++ ++|+.+|+++++. +++.+++.+|.+|.. ++|+.+|+++++
T Consensus 94 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 94 QHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMD 143 (177)
T ss_dssp TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 88 9898888888754 456666666666654 445555554444
No 138
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.12 E-value=9.8e-09 Score=90.86 Aligned_cols=210 Identities=6% Similarity=-0.158 Sum_probs=172.3
Q ss_pred CHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHc--CCHHHHHHHHHHH----HH-------H
Q 019734 120 NLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMD--KKEAAISLYRQAAVL--GDPAGQFNLGISY----LQ-------E 182 (336)
Q Consensus 120 ~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~--~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~----~~-------~ 182 (336)
..++|+..+++++.. .+..+++..|.++...+ ++++++.++.+++.. .+..+++..+.++ .. +
T Consensus 48 ~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~ 127 (306)
T 3dra_A 48 YSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPY 127 (306)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTH
T ss_pred CCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHH
Confidence 446899999999987 58999999999999999 999999999999854 7899999999999 32 7
Q ss_pred HHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHH--HHHHHHHHHHHC--CCHHHHHHHHHHHHcCCC--CcccHH
Q 019734 183 EAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQ--EAARWYLRAAEG--GYVRAMYNTSLCYSFGEG--LPLSHR 254 (336)
Q Consensus 183 ~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~--~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g--~~~~~~ 254 (336)
+++.++.++++. .+..++++.+.++.. .+.++ +++.++.++++. .+..|+.+.+.++..... ....++
T Consensus 128 ~EL~~~~~~l~~~pkny~aW~~R~~vl~~----l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~ 203 (306)
T 3dra_A 128 REFDILEAMLSSDPKNHHVWSYRKWLVDT----FDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTID 203 (306)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHH
Confidence 999999999876 589999999999987 55666 999999999764 689999999999865321 011289
Q ss_pred HHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHH-HHHHHHHHHHcC-----cHHHHHHHHHHHhhcChhcHHHHHHHH
Q 019734 255 QARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMK-AVVYLELATRAG-----ETAADHVKNVILQQLSATSRDRAMLVV 326 (336)
Q Consensus 255 ~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~-A~~~~~~A~~~~-----~~~a~~~~~~~~~~~~~~~~~~a~~~~ 326 (336)
++++++++++.. ++..+++.++.++...|+..+ ...+.++.+..+ ++.+...+..++.. .++.++|.+++
T Consensus 204 eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~--~~~~~~A~~~~ 281 (306)
T 3dra_A 204 EELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQ--QKKYNESRTVY 281 (306)
T ss_dssp HHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHH--TTCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHc--cCCHHHHHHHH
Confidence 999999999874 789999999999988887555 555777766543 77888888887764 46788999999
Q ss_pred HHhhc-CCCC
Q 019734 327 DSWRA-MPSL 335 (336)
Q Consensus 327 ~~~~~-~~~~ 335 (336)
+.+.+ ..|.
T Consensus 282 ~~l~~~~Dpi 291 (306)
T 3dra_A 282 DLLKSKYNPI 291 (306)
T ss_dssp HHHHHTTCGG
T ss_pred HHHHhccChH
Confidence 99885 4553
No 139
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.12 E-value=6.7e-10 Score=88.81 Aligned_cols=110 Identities=11% Similarity=0.062 Sum_probs=97.2
Q ss_pred hHHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHH
Q 019734 65 PFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVD 142 (336)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~ 142 (336)
.......+..++..|++++|+..+.+.++..+. ++.+++.+|.+|.. .+++++|+.+|++++.. .++.+++.
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA--NPIYLSNRAAAYSA----SGQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc--CHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 345677888888999999999999999999877 89999999999999 68999999999999987 58999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHH
Q 019734 143 AGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYL 180 (336)
Q Consensus 143 lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~ 180 (336)
+|.+|...|++++|+.+|+++++. +++.+++.++....
T Consensus 85 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~ 124 (164)
T 3sz7_A 85 LGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETT 124 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 999999999999999999999854 67777777666554
No 140
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.11 E-value=1.3e-09 Score=82.97 Aligned_cols=106 Identities=11% Similarity=0.087 Sum_probs=80.8
Q ss_pred CCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHH
Q 019734 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFN 174 (336)
Q Consensus 99 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~ 174 (336)
.++.+++.+|.++.. .+++++|+.+|++++.. .+..+++.+|.++...|++++|+.+|+++++. .++.+++.
T Consensus 14 ~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 89 (133)
T 2lni_A 14 DLALMVKNKGNECFQ----KGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTR 89 (133)
T ss_dssp CHHHHHHHHHHHHHH----TTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHH
Confidence 367888999999988 58999999999999887 47889999999999999999999999998864 56677777
Q ss_pred HHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHh
Q 019734 175 LGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLH 208 (336)
Q Consensus 175 Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~ 208 (336)
+|.++.. ++|+.+|+++++. .+..++..++.++.
T Consensus 90 la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 129 (133)
T 2lni_A 90 KAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMM 129 (133)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 7776665 5666666665543 24455555555554
No 141
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.09 E-value=4.2e-10 Score=92.93 Aligned_cols=106 Identities=16% Similarity=0.282 Sum_probs=80.5
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCH----------------HHHHHHHHHHhcCCCHHHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GST----------------LAMVDAGLMYWEMDKKEAAISLYR 161 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~----------------~a~~~lg~~~~~~~~~~~A~~~~~ 161 (336)
.+..+..+|.++.. .+++++|+.+|++++.. .++ .+++++|.+|...|++++|+.+|.
T Consensus 37 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 112 (198)
T 2fbn_A 37 SAFDIKEEGNEFFK----KNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 112 (198)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 45667778888887 57888888888888875 233 788888888888888888888888
Q ss_pred HHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhc
Q 019734 162 QAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHR 209 (336)
Q Consensus 162 ~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~ 209 (336)
++++. .++.+++.+|.+|.. ++|+.+|+++++. ++..++..++.++..
T Consensus 113 ~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 168 (198)
T 2fbn_A 113 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 168 (198)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 88754 567777777777776 7777777777654 466777777777654
No 142
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.09 E-value=4.2e-09 Score=97.24 Aligned_cols=197 Identities=12% Similarity=0.006 Sum_probs=117.7
Q ss_pred hHHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCC---------------HHHHHHHHHHHhcCCCCcCCHHHHHHHHH
Q 019734 65 PFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLRE---------------AMVLLRWGKRFKHGRGVRKNLDKALDSFL 129 (336)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~---------------~~a~~~lg~~~~~g~g~~~~~~~A~~~~~ 129 (336)
|...+.++...+..|++.+|...+...++..+..++ ..++..||.+|.. .+++++|+.+|.
T Consensus 4 p~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~----~~~~~~a~~~~~ 79 (434)
T 4b4t_Q 4 PGSKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVT----MGAKDKLREFIP 79 (434)
T ss_dssp TTHHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHH----HTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHH----CCCHHHHHHHHH
Confidence 446678888888889999999988888887665432 1356677777776 567777777777
Q ss_pred HHHHc----CC----HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Q 019734 130 KGAAR----GS----TLAMVDAGLMYWEMDKKEAAISLYRQAAVL----GDPAGQFNLGISYLQEEAVKLLYQASIAGHV 197 (336)
Q Consensus 130 ~A~~~----~~----~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~ 197 (336)
++... +. ......+|.++...|++++|+.++++++.. ++. ....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~------------------------~~~~ 135 (434)
T 4b4t_Q 80 HSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRV------------------------FLKH 135 (434)
T ss_dssp HTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCC------------------------SSHH
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCcc------------------------HHHH
Confidence 76653 11 123445666666667777777777666532 100 0113
Q ss_pred HHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc---
Q 019734 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--------GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--- 266 (336)
Q Consensus 198 ~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--------~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--- 266 (336)
..+.+||.+|.. .+++.+|..+++.+... ....++..+|.+|.. .+++++|..+|+++...
T Consensus 136 ~~~~~la~~~~~----~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 136 SLSIKLATLHYQ----KKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHK----LRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp HHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----ccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH----hCcHHHHHHHHHHHHHHhhc
Confidence 445555555555 55666666666555321 124455666666654 22666666666666542
Q ss_pred -C-C----HHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 267 -G-H----GKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 267 -~-~----~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
. + ...+..+|.++...+++++|..+|..+++
T Consensus 208 ~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~ 244 (434)
T 4b4t_Q 208 IYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFE 244 (434)
T ss_dssp SCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 1 1 12335566666666666666666666654
No 143
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.08 E-value=3.4e-09 Score=83.94 Aligned_cols=118 Identities=16% Similarity=0.063 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHH
Q 019734 170 AGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSL 241 (336)
Q Consensus 170 ~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~ 241 (336)
..++.+|.++.. ++|+.+|+++++. .++.+++++|.++.. .+++++|+.+|++++. +.++.+++.+|.
T Consensus 14 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~ 89 (166)
T 1a17_A 14 EELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR----TECYGYALGDATRAIELDKKYIKGYYRRAA 89 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 344444444444 4455555554432 244444555555444 4445555555554433 234444445554
Q ss_pred HHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHH--HHHhhccCCHHHHHHHHHHH
Q 019734 242 CYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEH--GLGLFTEGEMMKAVVYLELA 295 (336)
Q Consensus 242 ~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~l--g~~~~~~~~~~~A~~~~~~A 295 (336)
++.... ++++|+.+|++++.. .+..++..+ +..+...|++++|+.+++++
T Consensus 90 ~~~~~~----~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 143 (166)
T 1a17_A 90 SNMALG----KFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHK 143 (166)
T ss_dssp HHHHTT----CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhc----cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccch
Confidence 443311 455555555554442 223333222 22244444444444444443
No 144
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.07 E-value=1.6e-09 Score=87.53 Aligned_cols=108 Identities=17% Similarity=0.157 Sum_probs=71.4
Q ss_pred cCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHH-HHH------HHHHH
Q 019734 118 RKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGIS-YLQ------EEAVK 186 (336)
Q Consensus 118 ~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~-~~~------~~A~~ 186 (336)
.+++++|+.+|++++.. .++.+++.+|.+|...|++++|+.+|+++++. +++.+++.+|.+ +.. ++|+.
T Consensus 23 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~ 102 (177)
T 2e2e_A 23 QQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRA 102 (177)
T ss_dssp ----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHH
Confidence 57889999999999876 48899999999999999999999999998753 566677776666 433 44555
Q ss_pred HHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH
Q 019734 187 LLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 229 (336)
Q Consensus 187 ~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~ 229 (336)
+|+++++. +++.+++.+|.+|.. .+++++|+.+|+++++
T Consensus 103 ~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 103 MIDKALALDSNEITALMLLASDAFM----QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHH----cccHHHHHHHHHHHHh
Confidence 55555443 344555555555554 4455555555555543
No 145
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.05 E-value=4.7e-09 Score=82.22 Aligned_cols=130 Identities=18% Similarity=0.176 Sum_probs=84.3
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----C
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----GS----TLAMVDAGLMYWEMDKKEAAISLYRQAAVL----G 167 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~~----~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~ 167 (336)
.+.+++.+|.+|.. .+++++|+.+|++++.. ++ ..++..+|.++...|++++|+.+|+++++. +
T Consensus 8 ~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 83 (164)
T 3ro3_A 8 QGRAFGNLGNTHYL----LGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK 83 (164)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC
Confidence 35678888998888 58999999999998875 22 247888999999999999999999888753 2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----C----CHHHHHHH
Q 019734 168 DPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----G----YVRAMYNT 239 (336)
Q Consensus 168 ~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~----~~~a~~~l 239 (336)
++.. ...+++++|.++.. .+++++|+.+++++++. + ...++..+
T Consensus 84 ~~~~------------------------~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l 135 (164)
T 3ro3_A 84 DRAV------------------------EAQSCYSLGNTYTL----LQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSL 135 (164)
T ss_dssp CHHH------------------------HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcHH------------------------HHHHHHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHH
Confidence 2110 12334455555554 45566666666555432 1 13455666
Q ss_pred HHHHHcCCCCcccHHHHHHHHHHHHH
Q 019734 240 SLCYSFGEGLPLSHRQARKWMKRAAD 265 (336)
Q Consensus 240 g~~~~~~~g~~~~~~~A~~~~~~a~~ 265 (336)
|.+|.. .+++++|..+++++++
T Consensus 136 a~~~~~----~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 136 GNAYTA----LGNHDQAMHFAEKHLE 157 (164)
T ss_dssp HHHHHH----HTCHHHHHHHHHHHHH
T ss_pred HHHHHH----ccCHHHHHHHHHHHHH
Confidence 666643 2266666666666654
No 146
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.05 E-value=6e-09 Score=78.62 Aligned_cols=105 Identities=15% Similarity=0.124 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
++.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|.++++. .++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 11 EAERLKTEGNEQMK----VENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 45667777777776 46777777777777765 46777777777777777777777777777643 445555555
Q ss_pred HHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHh
Q 019734 176 GISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLH 208 (336)
Q Consensus 176 g~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~ 208 (336)
|.++.. ++|+.+|+++++. +++.++..+|.++.
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 125 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAEL 125 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 555554 4444444444432 23444444444443
No 147
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.04 E-value=5.4e-10 Score=104.94 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CC---------------HHHHHHHHHHHhcCCCHHHHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GS---------------TLAMVDAGLMYWEMDKKEAAISLYRQ 162 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~---------------~~a~~~lg~~~~~~~~~~~A~~~~~~ 162 (336)
.+.+++.+|.+|.. .+++++|+.+|++|+.. .+ ..+++++|.+|...+++++|+.+|.+
T Consensus 267 ~a~~~~~~G~~~~~----~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 267 QAAIVKEKGTVYFK----GGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh----CCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 45666677777766 46777777777777664 23 46666666666666666666666666
Q ss_pred HHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhc
Q 019734 163 AAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHR 209 (336)
Q Consensus 163 a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~ 209 (336)
+++. +++.+++++|.+|.. ++|+.+|+++++. ++..++.+++.++..
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~ 397 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKK 397 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHH
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 6543 455555555555554 4455555555443 234444444444443
No 148
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.02 E-value=1.1e-08 Score=75.79 Aligned_cols=76 Identities=13% Similarity=0.031 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLG 176 (336)
Q Consensus 101 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg 176 (336)
+.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+++++++. .++.+++.+|
T Consensus 4 ~~~~~~~~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 79 (118)
T 1elw_A 4 VNELKEKGNKALS----VGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKA 79 (118)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHH----cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 4555666666665 45666666666666654 35666666666666666666666666665543 3344444444
Q ss_pred HHHH
Q 019734 177 ISYL 180 (336)
Q Consensus 177 ~~~~ 180 (336)
.++.
T Consensus 80 ~~~~ 83 (118)
T 1elw_A 80 AALE 83 (118)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 149
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.02 E-value=1.1e-08 Score=80.08 Aligned_cols=130 Identities=15% Similarity=0.106 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCC
Q 019734 137 TLAMVDAGLMYWEMDKKEAAISLYRQAAVL----GDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 212 (336)
Q Consensus 137 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g 212 (336)
..++..+|.++...|++++|+.+|+++++. ++... ...++.++|.+|..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~------------------------~~~~~~~l~~~~~~--- 61 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAA------------------------ERIAYSNLGNAYIF--- 61 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH------------------------HHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchH------------------------HHHHHHHHHHHHHH---
Confidence 456788999999999999999999988753 12110 13466778888877
Q ss_pred CccCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc----CC----HHHHHHHH
Q 019734 213 VDFNLQEAARWYLRAAEG----GY----VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC----GH----GKAQLEHG 276 (336)
Q Consensus 213 ~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg 276 (336)
.+++++|+.+|+++++. ++ ..++.++|.++... +++++|+.++++++.. ++ ..++.++|
T Consensus 62 -~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la 136 (164)
T 3ro3_A 62 -LGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL----QDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLG 136 (164)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHH
Confidence 78899999999988653 22 56788999999763 3999999999999863 22 45678999
Q ss_pred HHhhccCCHHHHHHHHHHHHHc
Q 019734 277 LGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 277 ~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
.++...|++++|..+++++++.
T Consensus 137 ~~~~~~g~~~~A~~~~~~a~~~ 158 (164)
T 3ro3_A 137 NAYTALGNHDQAMHFAEKHLEI 158 (164)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHH
Confidence 9999999999999999999864
No 150
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.02 E-value=4e-10 Score=93.08 Aligned_cols=152 Identities=14% Similarity=0.119 Sum_probs=89.8
Q ss_pred cCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019734 118 RKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQEEAVKLLYQASI 193 (336)
Q Consensus 118 ~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~~~A~~~~~ka~~ 193 (336)
.+++++|.+.++..... .....+..+|..++..|++++|+.+|.++++. .++.. ..+. ... ..+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~~-~~~------~~~~~- 86 (198)
T 2fbn_A 17 LYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEW--DDQI-LLD------KKKNI- 86 (198)
T ss_dssp -----CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTC--CCHH-HHH------HHHHH-
T ss_pred hhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccccc--chhh-HHH------HHHHH-
Confidence 57788887777755433 45678889999999999999999999999864 22200 0000 000 00000
Q ss_pred cCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCH
Q 019734 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHG 269 (336)
Q Consensus 194 ~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~ 269 (336)
...+++++|.+|.. .+++++|+.+|++++. +.+..+++.+|.+|.. .+++++|+.+|++++.. ++.
T Consensus 87 --~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~p~~~ 156 (198)
T 2fbn_A 87 --EISCNLNLATCYNK----NKDYPKAIDHASKVLKIDKNNVKALYKLGVANMY----FGFLEEAKENLYKAASLNPNNL 156 (198)
T ss_dssp --HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHSTTCH
T ss_pred --HHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH----cccHHHHHHHHHHHHHHCCCcH
Confidence 13455666666665 5677777777777654 3566677777777654 22677777777777654 456
Q ss_pred HHHHHHHHHhhccCCHHHHH
Q 019734 270 KAQLEHGLGLFTEGEMMKAV 289 (336)
Q Consensus 270 ~a~~~lg~~~~~~~~~~~A~ 289 (336)
.++..++.++...++..++.
T Consensus 157 ~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 157 DIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 66667776666665555554
No 151
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.02 E-value=3.4e-09 Score=82.60 Aligned_cols=90 Identities=19% Similarity=0.139 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
+..+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.+|...|++++|+.+|++++.. +++.+++++
T Consensus 17 ~~~~~~~~a~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 92 (142)
T 2xcb_A 17 TLEQLYALGFNQYQ----AGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHA 92 (142)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred HHHHHHHHHHHHHH----HccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHH
Confidence 34455555555555 35555555555555544 35555555555555555555555555555433 455555555
Q ss_pred HHHHHH----HHHHHHHHHHHH
Q 019734 176 GISYLQ----EEAVKLLYQASI 193 (336)
Q Consensus 176 g~~~~~----~~A~~~~~ka~~ 193 (336)
|.+|.. ++|+.+|+++++
T Consensus 93 g~~~~~~g~~~~A~~~~~~al~ 114 (142)
T 2xcb_A 93 AECHLQLGDLDGAESGFYSARA 114 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 555555 555555555544
No 152
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.01 E-value=9.7e-08 Score=85.59 Aligned_cols=222 Identities=10% Similarity=-0.104 Sum_probs=169.6
Q ss_pred hhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcC-C-CHH
Q 019734 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEM-D-KKE 154 (336)
Q Consensus 79 ~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~-~-~~~ 154 (336)
...++|..++...+...|+ +..+++..+.++... ..++++++.++++++.. .+..+++..+.++... + +++
T Consensus 68 e~se~AL~lt~~~L~~nP~--~ytaWn~R~~iL~~l---~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~ 142 (349)
T 3q7a_A 68 EKSERALELTEIIVRMNPA--HYTVWQYRFSLLTSL---NKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPV 142 (349)
T ss_dssp CCSHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCH
T ss_pred CCCHHHHHHHHHHHHhCch--hHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChH
Confidence 4446899999999999888 899999999999873 23699999999999987 5899999999999887 7 899
Q ss_pred HHHHHHHHHHHc--CCHHHHHHHHHHHHH----H--------HHHHHHHHHHHc--CCHHHHHHHHHHHhcCCC---Ccc
Q 019734 155 AAISLYRQAAVL--GDPAGQFNLGISYLQ----E--------EAVKLLYQASIA--GHVRAQYQLALCLHRGRG---VDF 215 (336)
Q Consensus 155 ~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~--------~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g---~~~ 215 (336)
+++.++.++++. .+..++...+.++.. + ++++++.++++. .+..|+++.+.++..-.+ ...
T Consensus 143 ~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~ 222 (349)
T 3q7a_A 143 SEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSR 222 (349)
T ss_dssp HHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchH
Confidence 999999999865 789999999999876 4 999999999886 588999999999876211 112
Q ss_pred CHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCCCCcc----------------cHHHHHHHHHHHHH--------cCCH
Q 019734 216 NLQEAARWYLRAA--EGGYVRAMYNTSLCYSFGEGLPL----------------SHRQARKWMKRAAD--------CGHG 269 (336)
Q Consensus 216 ~~~~A~~~~~~a~--~~~~~~a~~~lg~~~~~~~g~~~----------------~~~~A~~~~~~a~~--------~~~~ 269 (336)
.+++++.++++++ .+++..+++++..++........ ...+-..+....+. ...+
T Consensus 223 ~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 302 (349)
T 3q7a_A 223 SLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVP 302 (349)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCSGGGHHHHGGGTC--------------CCCCC-CCCSSCCSCCH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCcccccccccccccccccccchhHHHHHHHHHhcccccccCCCcH
Confidence 2789999999996 46899999998888865421000 11222222222211 1346
Q ss_pred HHHHHHHHHhhccCCHHHHHHHHHHHHHc-CcHHHHH
Q 019734 270 KAQLEHGLGLFTEGEMMKAVVYLELATRA-GETAADH 305 (336)
Q Consensus 270 ~a~~~lg~~~~~~~~~~~A~~~~~~A~~~-~~~~a~~ 305 (336)
.+...|+.+|.+.|+.++|...|+...+. ++....+
T Consensus 303 ~al~~l~d~~~~~~~~~~a~~~~~~l~~~~dpir~~y 339 (349)
T 3q7a_A 303 LALEYLADSFIEQNRVDDAAKVFEKLSSEYDQMRAGY 339 (349)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCGGGHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhChHHHHH
Confidence 67789999999999999999999998754 4444443
No 153
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.01 E-value=4.2e-09 Score=79.95 Aligned_cols=73 Identities=25% Similarity=0.160 Sum_probs=34.6
Q ss_pred HHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHH
Q 019734 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYL 180 (336)
Q Consensus 105 ~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~ 180 (336)
+.+|.++.. .+++++|+..|++++.. +++.+++.+|.++...|++++|+..|+++++. +++.+++.||.+|.
T Consensus 21 ~~~g~~~~~----~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 21 MEEGLSMLK----LANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp HHHHHHHHH----TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHH----cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 444444444 34555555555555443 34555555555555555555555555554432 34444444444443
Q ss_pred H
Q 019734 181 Q 181 (336)
Q Consensus 181 ~ 181 (336)
.
T Consensus 97 ~ 97 (121)
T 1hxi_A 97 N 97 (121)
T ss_dssp H
T ss_pred H
Confidence 3
No 154
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.00 E-value=1.8e-08 Score=75.27 Aligned_cols=103 Identities=21% Similarity=0.349 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLG 176 (336)
Q Consensus 101 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg 176 (336)
+.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|+++++. .++.+++.+|
T Consensus 9 ~~~~~~~~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 84 (125)
T 1na0_A 9 AEAWYNLGNAYYK----QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLG 84 (125)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHH
Confidence 5677778887777 47888888888887765 46777788888888888888888887777653 4455555555
Q ss_pred HHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHH
Q 019734 177 ISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCL 207 (336)
Q Consensus 177 ~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~ 207 (336)
.++.. ++|+.+|+++++. .++.++..+|.++
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (125)
T 1na0_A 85 NAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 121 (125)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 55544 4444444444332 2344444444443
No 155
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.99 E-value=2.8e-09 Score=80.97 Aligned_cols=95 Identities=15% Similarity=-0.017 Sum_probs=80.2
Q ss_pred HHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHH
Q 019734 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLE 274 (336)
Q Consensus 199 a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~ 274 (336)
.++.+|..+.. .+++++|+..|++++. +.++.+++.+|.++.... ++++|+..|++++.. +++.++++
T Consensus 19 ~~~~~g~~~~~----~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g----~~~~A~~~~~~al~l~P~~~~~~~~ 90 (121)
T 1hxi_A 19 NPMEEGLSMLK----LANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENE----KDGLAIIALNHARMLDPKDIAVHAA 90 (121)
T ss_dssp CHHHHHHHHHH----TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hHHHHHHHHHH----cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 46788888887 7899999999999965 578999999999997633 999999999999885 56889999
Q ss_pred HHHHhhccCCHHHHHHHHHHHHHcCcH
Q 019734 275 HGLGLFTEGEMMKAVVYLELATRAGET 301 (336)
Q Consensus 275 lg~~~~~~~~~~~A~~~~~~A~~~~~~ 301 (336)
||.+|...|++++|+.+|+++++..+.
T Consensus 91 la~~~~~~g~~~~A~~~~~~al~~~P~ 117 (121)
T 1hxi_A 91 LAVSHTNEHNANAALASLRAWLLSQPQ 117 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 999999999999999999999986554
No 156
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.99 E-value=5.3e-10 Score=104.95 Aligned_cols=151 Identities=15% Similarity=0.126 Sum_probs=108.0
Q ss_pred CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 019734 119 KNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQEEAVKLLYQASIA 194 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~~~A~~~~~ka~~~ 194 (336)
+++++|+.+|+++... ..+.+++.+|.+++..|++++|+.+|++|++. .+.... .+ .......
T Consensus 248 ~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~--------~~-----~~~~~~~ 314 (457)
T 1kt0_A 248 KSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLS--------EK-----ESKASES 314 (457)
T ss_dssp EEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCC--------HH-----HHHHHHH
T ss_pred hhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCC--------hH-----HHHHHHH
Confidence 4566778778777654 46788999999999999999999999999864 221000 00 0001112
Q ss_pred CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHH
Q 019734 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGK 270 (336)
Q Consensus 195 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~ 270 (336)
....+++++|.||.. .+++++|+.+|+++++ +.+..+++++|.+|.... ++++|+.+|+++++. ++..
T Consensus 315 ~~~~~~~nla~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g----~~~~A~~~~~~al~l~P~~~~ 386 (457)
T 1kt0_A 315 FLLAAFLNLAMCYLK----LREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMN----EFESAKGDFEKVLEVNPQNKA 386 (457)
T ss_dssp HHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHTTC----C
T ss_pred HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHcc----CHHHHHHHHHHHHHhCCCCHH
Confidence 235677788888877 7888888888888865 467888888888886533 888888888888875 4567
Q ss_pred HHHHHHHHhhccCCHHHHHH
Q 019734 271 AQLEHGLGLFTEGEMMKAVV 290 (336)
Q Consensus 271 a~~~lg~~~~~~~~~~~A~~ 290 (336)
++.+++.++...++++++..
T Consensus 387 a~~~l~~~~~~~~~~~~a~~ 406 (457)
T 1kt0_A 387 ARLQISMCQKKAKEHNERDR 406 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 77888888888887777664
No 157
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.98 E-value=1.4e-08 Score=76.48 Aligned_cols=109 Identities=16% Similarity=0.148 Sum_probs=96.9
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
.....+...+..+++++|+..+.+.++..+. ++.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|
T Consensus 14 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 14 RLKTEGNEQMKVENFEAAVHFYGKAIELNPA--NAVYFCNRAAAYSK----LGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHH----hhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 4466677778899999999999999988766 78999999999998 58999999999999986 5789999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH
Q 019734 145 LMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ 181 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~ 181 (336)
.++...|++++|+.+|+++++. +++.++..+|.++..
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK 126 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 9999999999999999999865 688999999988863
No 158
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=3.5e-08 Score=76.37 Aligned_cols=103 Identities=13% Similarity=0.058 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC--C---HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG--S---TLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQ 172 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~--~---~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~ 172 (336)
++..++.+|.++.. .+++++|+.+|++++... + ..+++.+|.+|...|++++|+.+|+++++. .++.++
T Consensus 27 ~~~~~~~~a~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 27 SVEQLRKEGNELFK----CGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp CHHHHHHHHHHHHT----TTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred HHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 45666666666666 466777777777766652 2 566666677776667777776666666543 345555
Q ss_pred HHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHH
Q 019734 173 FNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALC 206 (336)
Q Consensus 173 ~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~ 206 (336)
+.+|.++.. ++|+.+|+++++. ++..++..++.+
T Consensus 103 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNI 142 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 555555544 4444444444432 234444444444
No 159
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.97 E-value=9.5e-09 Score=78.89 Aligned_cols=100 Identities=21% Similarity=0.082 Sum_probs=88.0
Q ss_pred cCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCH
Q 019734 194 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHG 269 (336)
Q Consensus 194 ~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~ 269 (336)
...+.+++.+|.++.. .+++++|+.+|++++. +.++.+++++|.+|... +++++|+.+|++++.. +++
T Consensus 6 ~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~----~~~~~A~~~~~~al~~~p~~~ 77 (137)
T 3q49_B 6 SPSAQELKEQGNRLFV----GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKM----QQPEQALADCRRALELDGQSV 77 (137)
T ss_dssp CCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHCTTCH
T ss_pred cccHHHHHHHHHHHHH----hCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHhCchhH
Confidence 3578889999999998 8999999999999965 46899999999999763 3999999999999985 668
Q ss_pred HHHHHHHHHhhccCCHHHHHHHHHHHHHcCcH
Q 019734 270 KAQLEHGLGLFTEGEMMKAVVYLELATRAGET 301 (336)
Q Consensus 270 ~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~ 301 (336)
.+++++|.++...|++++|+.+|+++++..+.
T Consensus 78 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 78 KAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 89999999999999999999999999986533
No 160
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.96 E-value=5.2e-09 Score=82.84 Aligned_cols=98 Identities=17% Similarity=-0.057 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--C-------CH-----HHHHHHHHHHHcCCCCcccHHHHHHHHHH
Q 019734 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--G-------YV-----RAMYNTSLCYSFGEGLPLSHRQARKWMKR 262 (336)
Q Consensus 197 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~-------~~-----~a~~~lg~~~~~~~g~~~~~~~A~~~~~~ 262 (336)
...+.++|..+.. .+++++|+..|++|++. . +. .++.++|.++.... ++++|+.+|++
T Consensus 11 a~~~~~~G~~l~~----~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lg----r~~eAl~~~~k 82 (159)
T 2hr2_A 11 AYLALSDAQRQLV----AGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLR----SFDEALHSADK 82 (159)
T ss_dssp HHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTT----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----CCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCC----CHHHHHHHHHH
Confidence 4567788888887 78999999999999653 4 33 38999999997633 99999999999
Q ss_pred HHHc---------CCHHHH----HHHHHHhhccCCHHHHHHHHHHHHHcCcHH
Q 019734 263 AADC---------GHGKAQ----LEHGLGLFTEGEMMKAVVYLELATRAGETA 302 (336)
Q Consensus 263 a~~~---------~~~~a~----~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~ 302 (336)
+++. ++..++ ++.|.++...|++++|+..|++|++..+.+
T Consensus 83 AL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 83 ALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 9976 457788 999999999999999999999999875443
No 161
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.96 E-value=1e-08 Score=81.68 Aligned_cols=100 Identities=21% Similarity=0.081 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--------------------CCHHHHHHHHHHHHcCCCCcccHHH
Q 019734 196 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--------------------GYVRAMYNTSLCYSFGEGLPLSHRQ 255 (336)
Q Consensus 196 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--------------------~~~~a~~~lg~~~~~~~g~~~~~~~ 255 (336)
.+.++..+|..+.. .+++++|+.+|++++.. ....+++++|.+|... +++++
T Consensus 10 ~a~~~~~~G~~~~~----~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~----~~~~~ 81 (162)
T 3rkv_A 10 SVEALRQKGNELFV----QKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNI----GDLHE 81 (162)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHH----TCHHH
T ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhc----CcHHH
Confidence 35677888888887 78999999999988653 4567899999999763 39999
Q ss_pred HHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcHHH
Q 019734 256 ARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAA 303 (336)
Q Consensus 256 A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~a 303 (336)
|+.++++++.. .++.+++.+|.+|...|++++|+.+|++++...+.+.
T Consensus 82 A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 82 AEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 99999999985 6789999999999999999999999999999865543
No 162
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.96 E-value=1.4e-07 Score=84.02 Aligned_cols=211 Identities=7% Similarity=-0.102 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCC----------HHHHHHHHHHHHHc--CCHHHHHHHHHHHHH-----
Q 019734 121 LDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDK----------KEAAISLYRQAAVL--GDPAGQFNLGISYLQ----- 181 (336)
Q Consensus 121 ~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~----------~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----- 181 (336)
.++|+.++.+++.. .+..+|+..+.++...+. +++++.++.+++.. .+..+|+..+.++..
T Consensus 46 s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~ 125 (331)
T 3dss_A 46 DESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPN 125 (331)
T ss_dssp SHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCC
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCccc
Confidence 45899999999987 588999999999877654 68999999998854 799999999999987
Q ss_pred -HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccC-HHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCC-------
Q 019734 182 -EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFN-LQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEG------- 248 (336)
Q Consensus 182 -~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~-~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g------- 248 (336)
++++.++.++++. .+..|+.+-+.++.. .+. +++++.++.++++ +.+..|+++.+.++.....
T Consensus 126 ~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~----l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~ 201 (331)
T 3dss_A 126 WARELELCARFLEADERNFHCWDYRRFVAAQ----AAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQ 201 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC-----
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccc
Confidence 7999999999886 589999999999886 455 6899999999975 4789999999999865311
Q ss_pred ---CcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhcc-----------CCHHHHHHHHHHHHHcCcHHHHHHHHHHH-
Q 019734 249 ---LPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTE-----------GEMMKAVVYLELATRAGETAADHVKNVIL- 311 (336)
Q Consensus 249 ---~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~-----------~~~~~A~~~~~~A~~~~~~~a~~~~~~~~- 311 (336)
....+++++.++.+++.. ++..+++.+..++... +.+++++.++++.++..+......+..+.
T Consensus 202 ~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~pd~~w~l~~~~~~ 281 (331)
T 3dss_A 202 GRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILL 281 (331)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCcccchHHHHHHHH
Confidence 014689999999999974 7788887666555554 46899999999999876554444444332
Q ss_pred -hhc-ChhcHHHHHHHHHHhhcCCCC
Q 019734 312 -QQL-SATSRDRAMLVVDSWRAMPSL 335 (336)
Q Consensus 312 -~~~-~~~~~~~a~~~~~~~~~~~~~ 335 (336)
..+ ..+..++......++++..|.
T Consensus 282 ~~~~~~~~~~~~~~~~l~~l~~~Dp~ 307 (331)
T 3dss_A 282 MRALDPLLYEKETLQYFSTLKAVDPM 307 (331)
T ss_dssp HHHHCTTTTHHHHHHHHHHHHHHCGG
T ss_pred HHhhcccccHHHHHHHHHHHHHhCcc
Confidence 222 234566778888888877764
No 163
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.96 E-value=1.8e-08 Score=74.53 Aligned_cols=107 Identities=9% Similarity=0.004 Sum_probs=95.0
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
.....+...+..|++++|+..+.+.++..+. ++.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|
T Consensus 6 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 79 (118)
T 1elw_A 6 ELKEKGNKALSVGNIDDALQCYSEAIKLDPH--NHVLYSNRSAAYAK----KGDYQKAYEDGCKTVDLKPDWGKGYSRKA 79 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHCCC--cHHHHHHHHHHHHh----hccHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 4466677778899999999999999988776 79999999999998 68999999999999987 4789999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHH
Q 019734 145 LMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISY 179 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~ 179 (336)
.++...|++++|+.+|+++++. +++.++..++.+.
T Consensus 80 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 80 AALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 9999999999999999999876 6788888888765
No 164
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.96 E-value=1.7e-08 Score=77.43 Aligned_cols=89 Identities=25% Similarity=0.293 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
++..++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|++++.. +++.+++.+
T Consensus 8 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 83 (137)
T 3q49_B 8 SAQELKEQGNRLFV----GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFL 83 (137)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHH----hCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHH
Confidence 67777777877777 57788888888877775 46777778888887778888777777777643 455555555
Q ss_pred HHHHHH----HHHHHHHHHHH
Q 019734 176 GISYLQ----EEAVKLLYQAS 192 (336)
Q Consensus 176 g~~~~~----~~A~~~~~ka~ 192 (336)
|.++.. ++|+.+|++++
T Consensus 84 ~~~~~~~~~~~~A~~~~~~a~ 104 (137)
T 3q49_B 84 GQCQLEMESYDEAIANLQRAY 104 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHH
Confidence 555554 44444444443
No 165
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.94 E-value=2.4e-08 Score=75.29 Aligned_cols=62 Identities=18% Similarity=0.240 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Q 019734 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166 (336)
Q Consensus 101 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~ 166 (336)
+.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|.++++.
T Consensus 4 ~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 67 (131)
T 1elr_A 4 ALKEKELGNDAYK----KKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEV 67 (131)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 4566777777766 46777777777777765 36677777777777777777777777776643
No 166
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.93 E-value=2.5e-08 Score=74.46 Aligned_cols=108 Identities=18% Similarity=0.192 Sum_probs=95.2
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAG 144 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg 144 (336)
.....+...+..|++++|...+.+.++..+. ++.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|
T Consensus 11 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~la 84 (125)
T 1na0_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPN--NAEAWYNLGNAYYK----QGDYDEAIEYYQKALELDPNNAEAWYNLG 84 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC--cHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCccHHHHHHHH
Confidence 4455666677889999999999999988765 78999999999998 58999999999999986 5789999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHH
Q 019734 145 LMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYL 180 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~ 180 (336)
.++...|++++|+.+|+++++. .++.++..+|.++.
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 85 NAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 9999999999999999999865 78999999998875
No 167
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.93 E-value=1.3e-08 Score=80.56 Aligned_cols=101 Identities=14% Similarity=0.025 Sum_probs=70.1
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--C-------CH-----HHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--G-------ST-----LAMVDAGLMYWEMDKKEAAISLYRQAAV 165 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~-------~~-----~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 165 (336)
.+..+..+|..++. .+++++|+.+|++|++. . +. .+++++|.++...|++++|+..|.+|++
T Consensus 10 ~a~~~~~~G~~l~~----~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 10 GAYLALSDAQRQLV----AGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 45677888888887 68999999999999876 3 22 3889999999999999999999988875
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHH----HHHHHHHhcCCCCccCHHHHHHHHHHHHH
Q 019734 166 LGDPAGQFNLGISYLQEEAVKLLYQASI--AGHVRAQ----YQLALCLHRGRGVDFNLQEAARWYLRAAE 229 (336)
Q Consensus 166 ~~~~~a~~~Lg~~~~~~~A~~~~~ka~~--~~~~~a~----~~lg~~~~~g~g~~~~~~~A~~~~~~a~~ 229 (336)
. |.++.+ .+++.++ +++|.++.. .+++++|+..|+++++
T Consensus 86 l---------------------~n~~~e~~pd~~~A~~~~~~~rG~aL~~----lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 86 Y---------------------FNRRGELNQDEGKLWISAVYSRALALDG----LGRGAEAMPEFKKVVE 130 (159)
T ss_dssp H---------------------HHHHCCTTSTHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred h---------------------hhccccCCCchHHHHHHHHHhHHHHHHH----CCCHHHHHHHHHHHHh
Confidence 3 222221 2344444 555555555 5566666666666643
No 168
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.90 E-value=3e-08 Score=74.81 Aligned_cols=109 Identities=14% Similarity=0.087 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CC----
Q 019734 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GH---- 268 (336)
Q Consensus 197 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~---- 268 (336)
+.+++.+|.++.. .+++++|+.+|+++++. .++.+++.+|.+|.. .+++++|+.+|++++.. .+
T Consensus 4 ~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~ 75 (131)
T 1elr_A 4 ALKEKELGNDAYK----KKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE----KGDYNKCRELCEKAIEVGRENREDY 75 (131)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH----hccHHHHHHHHHHHHhhccccchhH
Confidence 4678889999887 78999999999999764 678999999999975 33999999999999875 23
Q ss_pred ---HHHHHHHHHHhhccCCHHHHHHHHHHHHHcC-cHHHHHHHHHHHhh
Q 019734 269 ---GKAQLEHGLGLFTEGEMMKAVVYLELATRAG-ETAADHVKNVILQQ 313 (336)
Q Consensus 269 ---~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~-~~~a~~~~~~~~~~ 313 (336)
..+++++|.++...|++++|..+|+++++.. ++.....+..+...
T Consensus 76 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~ 124 (131)
T 1elr_A 76 RQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKI 124 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 7788999999999999999999999999864 45555555554443
No 169
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.90 E-value=3.9e-08 Score=76.11 Aligned_cols=110 Identities=12% Similarity=-0.025 Sum_probs=95.4
Q ss_pred ChHHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCC---HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHH
Q 019734 64 LPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTL 138 (336)
Q Consensus 64 ~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~ 138 (336)
........+...+..|++.+|+..+.+.++..++ + ..+++.+|.+|.. .+++++|+.+|++++.. .++.
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~~~~~~ 100 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT--PQDQAVLHRNRAACHLK----LEDYDKAETEASKAIEKDGGDVK 100 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC--HHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHTSCCHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc--chHHHHHHHHHHHHHHH----HccHHHHHHHHHHHHhhCccCHH
Confidence 4556678888889999999999888888877554 4 7899999999998 68999999999999986 5799
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHH
Q 019734 139 AMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISY 179 (336)
Q Consensus 139 a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~ 179 (336)
+++.+|.++...|++++|+.+|+++++. ++..++..++.+.
T Consensus 101 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 101 ALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999865 6788887777654
No 170
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.90 E-value=1.6e-08 Score=76.71 Aligned_cols=91 Identities=16% Similarity=0.125 Sum_probs=44.9
Q ss_pred HHHhcCCChhHHhhhHHHHHHHHHhCCCC-CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CC---HHHHHHHH
Q 019734 71 KIAASFTLPQLRAASLVCKSWNDALRPLR-EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GS---TLAMVDAG 144 (336)
Q Consensus 71 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~---~~a~~~lg 144 (336)
.+...+..|++.+|+..+..+++..|+.. .+.+++.+|.+|.. .+++++|+.+|++++.. ++ +.+++.+|
T Consensus 8 ~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~----~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 8 VAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA----TRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 33444445555555555555555444311 11455555555555 34555555555555543 23 44555555
Q ss_pred HHHhcCCCHHHHHHHHHHHHH
Q 019734 145 LMYWEMDKKEAAISLYRQAAV 165 (336)
Q Consensus 145 ~~~~~~~~~~~A~~~~~~a~~ 165 (336)
.++...|++++|+.+|+++++
T Consensus 84 ~~~~~~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 84 LSQYGEGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHH
Confidence 555555555555555555543
No 171
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.89 E-value=3.9e-08 Score=74.49 Aligned_cols=94 Identities=20% Similarity=0.231 Sum_probs=81.9
Q ss_pred HHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCH---HHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CC--
Q 019734 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYV---RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GH-- 268 (336)
Q Consensus 198 ~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~---~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~-- 268 (336)
.+++.+|.++.. .+++++|+..|++++. +++. .+++.+|.+|... +++++|+.+|++++.. ++
T Consensus 3 ~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~----~~~~~A~~~~~~~~~~~p~~~~ 74 (129)
T 2xev_A 3 RTAYNVAFDALK----NGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYAT----RNFQLAEAQFRDLVSRYPTHDK 74 (129)
T ss_dssp CCHHHHHHHHHH----TTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHCTTSTT
T ss_pred HHHHHHHHHHHH----hCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHCCCCcc
Confidence 457889999888 8999999999999976 3455 7999999999763 3999999999999985 45
Q ss_pred -HHHHHHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 269 -GKAQLEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 269 -~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
+.+++++|.++...|++++|..+|++++...
T Consensus 75 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 106 (129)
T 2xev_A 75 AAGGLLKLGLSQYGEGKNTEAQQTLQQVATQY 106 (129)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 7889999999999999999999999999864
No 172
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.89 E-value=1.8e-08 Score=80.22 Aligned_cols=109 Identities=10% Similarity=-0.036 Sum_probs=71.7
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhC----------------CCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALR----------------PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLK 130 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~----------------~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~ 130 (336)
.+...+..++..|++.+|+..|.+.++..+ +..++.+++++|.+|.. .+++++|+.++++
T Consensus 13 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 13 ALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN----IGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH----HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh----cCcHHHHHHHHHH
Confidence 345666667777777777777777776611 11145677777777776 5677777777777
Q ss_pred HHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCH-HHHHHHHHHH
Q 019734 131 GAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDP-AGQFNLGISY 179 (336)
Q Consensus 131 A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~-~a~~~Lg~~~ 179 (336)
++.. .++.+++.+|.+|...|++++|+..|+++++. +++ .....|+.+.
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 7765 46777777777777777777777777777654 444 3344444443
No 173
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.89 E-value=2.1e-08 Score=91.34 Aligned_cols=105 Identities=14% Similarity=0.141 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHH----------------c--CCHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 019734 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAA----------------R--GSTLAMVDAGLMYWEMDKKEAAISLYRQ 162 (336)
Q Consensus 101 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~----------------~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~ 162 (336)
+..+..+|..+.. .+++++|+.+|++|++ . .+..+++++|.+|...+++++|+.+|++
T Consensus 223 a~~~~~~g~~~~~----~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 298 (370)
T 1ihg_A 223 SEDLKNIGNTFFK----SQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLE 298 (370)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 4557777777777 5788888888888776 2 2456667777777777777777777777
Q ss_pred HHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHhc
Q 019734 163 AAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA--GHVRAQYQLALCLHR 209 (336)
Q Consensus 163 a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~ 209 (336)
+++. +++.+++.+|.+|.. ++|+.+|+++++. ++..++..++.++..
T Consensus 299 al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~ 353 (370)
T 1ihg_A 299 ALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQK 353 (370)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 7654 456666666666655 5555555555443 344455555555443
No 174
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.89 E-value=6.2e-09 Score=93.71 Aligned_cols=96 Identities=13% Similarity=0.001 Sum_probs=44.5
Q ss_pred HHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC--cHHHHHHHHHH
Q 019734 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG--ETAADHVKNVI 310 (336)
Q Consensus 235 a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~--~~~a~~~~~~~ 310 (336)
+++++|.+|.... ++++|+.+|++++.. .+..+++++|.+|...|++++|+.+|+++++.. +..+...+..+
T Consensus 232 ~~~nla~~~~~~g----~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l 307 (338)
T 2if4_A 232 CHLNIAACLIKLK----RYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRAL 307 (338)
T ss_dssp HHHHHHHHHHTTT----CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------
T ss_pred HHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 6777888776532 778888888888764 457777888888888888888888888887654 33444444444
Q ss_pred HhhcChhcHHHHHHHHHHhhcCCCC
Q 019734 311 LQQLSATSRDRAMLVVDSWRAMPSL 335 (336)
Q Consensus 311 ~~~~~~~~~~~a~~~~~~~~~~~~~ 335 (336)
... .....++++...+++....|.
T Consensus 308 ~~~-~~~~~~~a~~~~~~~l~~~p~ 331 (338)
T 2if4_A 308 AEQ-EKALYQKQKEMYKGIFKGKDE 331 (338)
T ss_dssp -------------------------
T ss_pred HHH-HHHHHHHHHHHHHHhhCCCCC
Confidence 322 234455556666666665554
No 175
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.88 E-value=1.4e-08 Score=74.44 Aligned_cols=98 Identities=10% Similarity=-0.055 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--C--C
Q 019734 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--G--H 268 (336)
Q Consensus 195 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~--~ 268 (336)
+++.+++.+|.++.. .+++++|+.+|+++++. .+..+++++|.++.... ++++|+.+|++++.. . +
T Consensus 4 ~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~----~~~~A~~~~~~a~~~~~~~~~ 75 (112)
T 2kck_A 4 QNPEEYYLEGVLQYD----AGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLE----RYEEAVDCYNYVINVIEDEYN 75 (112)
T ss_dssp SSTTGGGGHHHHHHS----SCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHTSCCTTC
T ss_pred CcHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcc----CHHHHHHHHHHHHHhCcccch
Confidence 456678889999988 78999999999999764 67899999999997633 899999999999985 5 6
Q ss_pred HHHHHHHHHHhhcc-CCHHHHHHHHHHHHHcCc
Q 019734 269 GKAQLEHGLGLFTE-GEMMKAVVYLELATRAGE 300 (336)
Q Consensus 269 ~~a~~~lg~~~~~~-~~~~~A~~~~~~A~~~~~ 300 (336)
..+++++|.++... |++++|..++++++...+
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 76 KDVWAAKADALRYIEGKEVEAEIAEARAKLEHH 108 (112)
T ss_dssp HHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhccc
Confidence 78889999999999 999999999999987653
No 176
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.86 E-value=1.6e-09 Score=102.15 Aligned_cols=114 Identities=12% Similarity=0.105 Sum_probs=76.2
Q ss_pred HHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHH
Q 019734 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISY 179 (336)
Q Consensus 104 ~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~ 179 (336)
++.+|.++.. .+++++|+.+|++|++. .++.+++++|.+|...|++++|+.+|+++++. +++.+++++|.+|
T Consensus 9 ~~~lg~~~~~----~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 84 (477)
T 1wao_1 9 LKTQANDYFK----AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 84 (477)
T ss_dssp SSSSSSSTTT----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHH----hCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4445555554 46777777777777765 46777777777777777777777777777754 5677777777777
Q ss_pred HH----HHHHHHHHHHHHc--CCHHHHHHHHHH--HhcCCCCccCHHHHHHHHH
Q 019734 180 LQ----EEAVKLLYQASIA--GHVRAQYQLALC--LHRGRGVDFNLQEAARWYL 225 (336)
Q Consensus 180 ~~----~~A~~~~~ka~~~--~~~~a~~~lg~~--~~~g~g~~~~~~~A~~~~~ 225 (336)
.. ++|+.+|+++++. ++..++.+++.+ +.. .+++++|+..++
T Consensus 85 ~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~----~g~~~~A~~~~~ 134 (477)
T 1wao_1 85 MALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK----QKAFERAIAGDE 134 (477)
T ss_dssp HHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHH----HHHHCCC-----
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH----HHHHHHHhcccc
Confidence 76 7777777777664 456677777776 554 567777777777
No 177
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.85 E-value=1.1e-08 Score=92.04 Aligned_cols=148 Identities=13% Similarity=0.033 Sum_probs=79.5
Q ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCc
Q 019734 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQF-NLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 214 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~-~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~ 214 (336)
....++.+|..++..|++++|+.+|++++........+ .++.. .++...+ ...+++++|.+|.. .
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~---~~~~~~l-------~~~~~~nla~~~~~----~ 243 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKY---QDMALAV-------KNPCHLNIAACLIK----L 243 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHH---HHHHHHH-------HTHHHHHHHHHHHT----T
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccH---HHHHHHH-------HHHHHHHHHHHHHH----c
Confidence 35667888888888888888888888888764433211 11110 2222221 12477888988887 7
Q ss_pred cCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhh-ccCCHHHHH
Q 019734 215 FNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLF-TEGEMMKAV 289 (336)
Q Consensus 215 ~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~-~~~~~~~A~ 289 (336)
+++++|+.+|+++++ +.+..+++++|.+|.... ++++|+.+|++++.. ++..++.+|+.+.. ..+..+++.
T Consensus 244 g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g----~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~ 319 (338)
T 2if4_A 244 KRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELG----QMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQK 319 (338)
T ss_dssp TCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT----CHHHHHHHHHHTTC---------------------------
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999998865 467888999999986533 899999999998764 56777888888743 456788888
Q ss_pred HHHHHHHHcCcH
Q 019734 290 VYLELATRAGET 301 (336)
Q Consensus 290 ~~~~~A~~~~~~ 301 (336)
..|++++...+.
T Consensus 320 ~~~~~~l~~~p~ 331 (338)
T 2if4_A 320 EMYKGIFKGKDE 331 (338)
T ss_dssp ------------
T ss_pred HHHHHhhCCCCC
Confidence 888888876543
No 178
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.83 E-value=2.7e-08 Score=72.88 Aligned_cols=97 Identities=15% Similarity=0.010 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGI 177 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~ 177 (336)
++.+++.+|.++.. .+++++|+.+|++++.. .+..+++.+|.++...|++++|+.+|+++++..
T Consensus 5 ~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~---------- 70 (112)
T 2kck_A 5 NPEEYYLEGVLQYD----AGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVI---------- 70 (112)
T ss_dssp STTGGGGHHHHHHS----SCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS----------
T ss_pred cHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC----------
Confidence 44555556666655 35666666666666554 345555666666665666665555555555321
Q ss_pred HHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHhcCCCCc-cCHHHHHHHHHHHHHC
Q 019734 178 SYLQEEAVKLLYQASIAG--HVRAQYQLALCLHRGRGVD-FNLQEAARWYLRAAEG 230 (336)
Q Consensus 178 ~~~~~~A~~~~~ka~~~~--~~~a~~~lg~~~~~g~g~~-~~~~~A~~~~~~a~~~ 230 (336)
.. +..+++.+|.++.. . +++++|+.++++++..
T Consensus 71 ----------------~~~~~~~~~~~l~~~~~~----~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 71 ----------------EDEYNKDVWAAKADALRY----IEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp ----------------CCTTCHHHHHHHHHHHTT----CSSCSHHHHHHHHHHGGG
T ss_pred ----------------cccchHHHHHHHHHHHHH----HhCCHHHHHHHHHHHhhc
Confidence 12 44555556666655 6 6777777777776543
No 179
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.81 E-value=1.6e-08 Score=75.91 Aligned_cols=81 Identities=14% Similarity=0.098 Sum_probs=46.1
Q ss_pred hhHHhhhHHHHHHHHH---hCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCH
Q 019734 79 PQLRAASLVCKSWNDA---LRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKK 153 (336)
Q Consensus 79 ~~~~~a~~~~~~~~~~---~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~ 153 (336)
|++++|+..+.+.++. .|+ ++.+++.||.+|.. .+++++|+.+|+++++. +++.+++.+|.++...|++
T Consensus 4 g~~~~A~~~~~~al~~~~~~p~--~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 77 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASGLQGKD--LAECYLGLGSTFRT----LGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRY 77 (117)
T ss_dssp ---CCCHHHHHHHHSSCCCHHH--HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred CcHHHHHHHHHHHHHcCCCCcc--HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCH
Confidence 4555565555555554 233 45566666666665 45666666666666654 3566666666666666666
Q ss_pred HHHHHHHHHHHH
Q 019734 154 EAAISLYRQAAV 165 (336)
Q Consensus 154 ~~A~~~~~~a~~ 165 (336)
++|+.+|++++.
T Consensus 78 ~~A~~~~~~al~ 89 (117)
T 3k9i_A 78 EQGVELLLKIIA 89 (117)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666666653
No 180
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.77 E-value=6.4e-08 Score=88.18 Aligned_cols=79 Identities=16% Similarity=0.053 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC--cHHHHHH
Q 019734 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG--ETAADHV 306 (336)
Q Consensus 231 ~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~--~~~a~~~ 306 (336)
.+..+++++|.+|.... ++++|+.+++++++. +++.+++++|.+|...|++++|+.+|++|++.. +..+...
T Consensus 271 ~~~~~~~nla~~~~~~g----~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~ 346 (370)
T 1ihg_A 271 VALSCVLNIGACKLKMS----DWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAE 346 (370)
T ss_dssp HHHHHHHHHHHHHHHTT----CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc----CHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 34667778888876533 788888888888764 557778888888888888888888888887764 4455555
Q ss_pred HHHHHhh
Q 019734 307 KNVILQQ 313 (336)
Q Consensus 307 ~~~~~~~ 313 (336)
+..+...
T Consensus 347 l~~~~~~ 353 (370)
T 1ihg_A 347 LLKVKQK 353 (370)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 181
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.75 E-value=3e-07 Score=88.41 Aligned_cols=163 Identities=6% Similarity=-0.153 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCC----------HHHHHHHHHHHHHc--CCHHHHHHHHHHHHH-----
Q 019734 121 LDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDK----------KEAAISLYRQAAVL--GDPAGQFNLGISYLQ----- 181 (336)
Q Consensus 121 ~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~----------~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----- 181 (336)
.++|+.++++++.. .+..+|+..+.++...++ +++++.++.++++. .+..+|++.+.++..
T Consensus 45 ~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~ 124 (567)
T 1dce_A 45 DESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPN 124 (567)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCC
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccccc
Confidence 34666666666655 356666666666666555 66666666666543 566666666666655
Q ss_pred -HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCcc-CHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCC-------
Q 019734 182 -EEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDF-NLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEG------- 248 (336)
Q Consensus 182 -~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~-~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g------- 248 (336)
++++.++.++++. .+..||++.+.++.. .+ .++++++++.++++. .+..||++.+.++....+
T Consensus 125 ~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~----l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~ 200 (567)
T 1dce_A 125 WARELELCARFLEADERNFHCWDYRRFVAAQ----AAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQ 200 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSC
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHH----cCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhccccccccc
Confidence 5666666666654 366666666666655 34 677788888887643 577888888887754210
Q ss_pred ---CcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHH
Q 019734 249 ---LPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMK 287 (336)
Q Consensus 249 ---~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~ 287 (336)
....++++++++.+|+.. ++..+++.++.++...+.+++
T Consensus 201 ~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~~~~~ 244 (567)
T 1dce_A 201 GRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPHDV 244 (567)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCCCSC
T ss_pred ccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCCCccc
Confidence 124678899999998874 678888888888877776444
No 182
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.74 E-value=4e-08 Score=73.68 Aligned_cols=92 Identities=12% Similarity=0.082 Sum_probs=72.8
Q ss_pred ccCHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHH
Q 019734 214 DFNLQEAARWYLRAAEG-----GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMM 286 (336)
Q Consensus 214 ~~~~~~A~~~~~~a~~~-----~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~ 286 (336)
.+++++|+.+|+++++. .++.+++++|.+|.... ++++|+.+|++++.. +++.+++++|.++...|+++
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~----~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 78 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLG----EYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYE 78 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHH
Confidence 57889999999999865 35688999999997633 999999999999885 67889999999999999999
Q ss_pred HHHHHHHHHHHc--CcHHHHHHHHH
Q 019734 287 KAVVYLELATRA--GETAADHVKNV 309 (336)
Q Consensus 287 ~A~~~~~~A~~~--~~~~a~~~~~~ 309 (336)
+|+.+|++++.. +++........
T Consensus 79 ~A~~~~~~al~~~p~~~~~~~~~~a 103 (117)
T 3k9i_A 79 QGVELLLKIIAETSDDETIQSYKQA 103 (117)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHTHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 999999999876 34444433333
No 183
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.72 E-value=3.5e-07 Score=87.93 Aligned_cols=160 Identities=8% Similarity=-0.150 Sum_probs=137.7
Q ss_pred HHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCC----------HHHHHHHHHHHHHc--CCHHHHHHHHHHHh
Q 019734 81 LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKN----------LDKALDSFLKGAAR--GSTLAMVDAGLMYW 148 (336)
Q Consensus 81 ~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~----------~~~A~~~~~~A~~~--~~~~a~~~lg~~~~ 148 (336)
.++|...+.+.++..|+ +..+|+..|.++.. .++ +++++.++++++.. .+..+|+..+.++.
T Consensus 45 ~eeal~~~~~~l~~nP~--~~taW~~R~~~l~~----l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~ 118 (567)
T 1dce_A 45 DESVLELTSQILGANPD--FATLWNCRREVLQH----LETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118 (567)
T ss_dssp SHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----HHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCch--hHHHHHHHHHHHHh----cccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34778899999999888 89999999999887 234 99999999999987 48999999999999
Q ss_pred cCC--CHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH-----HHHHHHHHHHHHc--CCHHHHHHHHHHHhcCC------
Q 019734 149 EMD--KKEAAISLYRQAAVL--GDPAGQFNLGISYLQ-----EEAVKLLYQASIA--GHVRAQYQLALCLHRGR------ 211 (336)
Q Consensus 149 ~~~--~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~-----~~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~------ 211 (336)
..+ ++++++.++.++++. .+..||.+.|.++.. +++++++.++++. .+..||++.|.++..-.
T Consensus 119 ~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~ 198 (567)
T 1dce_A 119 RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSG 198 (567)
T ss_dssp TCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSS
T ss_pred HcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhccccccc
Confidence 999 779999999999866 789999999999887 8999999999876 58999999999876510
Q ss_pred ----CCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcC
Q 019734 212 ----GVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFG 246 (336)
Q Consensus 212 ----g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~ 246 (336)
-..+.++++++++.+|+. +++..+|++++.++..+
T Consensus 199 ~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~ 239 (567)
T 1dce_A 199 PQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRA 239 (567)
T ss_dssp SCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCC
T ss_pred ccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcC
Confidence 012668999999999964 68999999999999664
No 184
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.72 E-value=1.6e-07 Score=66.26 Aligned_cols=77 Identities=21% Similarity=0.334 Sum_probs=68.5
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNL 175 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~L 175 (336)
++.+++.+|.++.. .+++++|+.+|++++.. .++.+++.+|.++...|++++|+.+|+++++. +++.++.++
T Consensus 8 ~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l 83 (91)
T 1na3_A 8 SAEAWYNLGNAYYK----QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNL 83 (91)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHH----ccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 56788999999988 58999999999999986 57899999999999999999999999999865 788999999
Q ss_pred HHHHH
Q 019734 176 GISYL 180 (336)
Q Consensus 176 g~~~~ 180 (336)
|.++.
T Consensus 84 ~~~~~ 88 (91)
T 1na3_A 84 GNAKQ 88 (91)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 185
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.71 E-value=5.2e-07 Score=79.36 Aligned_cols=164 Identities=7% Similarity=-0.115 Sum_probs=77.3
Q ss_pred HHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHH----HHHHHHHHHHHH
Q 019734 124 ALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL----GDPAGQFNLGISYLQ----EEAVKLLYQASI 193 (336)
Q Consensus 124 A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~~~~a~~~Lg~~~~~----~~A~~~~~ka~~ 193 (336)
|+..|++.+.. ....+.+.+|.++...|++++|+.++.+.++. ++.++...++.++.. +.|.+.+++..+
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~ 164 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTN 164 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 34444444432 23444455555555555555555555555544 234444455555544 444444444433
Q ss_pred cCC------HHHHHHHHHH--Hh-cCCCCccCHHHHHHHHHHHHHCCC----HHHHHHHHHHHHcCCCCcccHHHHHHHH
Q 019734 194 AGH------VRAQYQLALC--LH-RGRGVDFNLQEAARWYLRAAEGGY----VRAMYNTSLCYSFGEGLPLSHRQARKWM 260 (336)
Q Consensus 194 ~~~------~~a~~~lg~~--~~-~g~g~~~~~~~A~~~~~~a~~~~~----~~a~~~lg~~~~~~~g~~~~~~~A~~~~ 260 (336)
... -....+|+.. .. .| .+++..|+..|+.+++... +...++ ++.. .+++++|...+
T Consensus 165 ~~~d~~~~~d~~l~~Laea~v~l~~g---~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~----~g~~~eAe~~L 234 (310)
T 3mv2_B 165 AIEDTVSGDNEMILNLAESYIKFATN---KETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQ----QRNIAEAQGIV 234 (310)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHT---CSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHH----HTCHHHHHHHH
T ss_pred cCccccccchHHHHHHHHHHHHHHhC---CccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHH----cCCHHHHHHHH
Confidence 322 2223333322 11 11 1355666666666544321 222222 3332 12666666666
Q ss_pred HHHHH------------cCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 261 KRAAD------------CGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 261 ~~a~~------------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
+.... .+++++..|+..+....|+ +|..+++++....
T Consensus 235 ~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~ 283 (310)
T 3mv2_B 235 ELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLD 283 (310)
T ss_dssp HHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTT
T ss_pred HHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhC
Confidence 54332 3345555555555555555 5556666665543
No 186
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.71 E-value=3.5e-06 Score=75.43 Aligned_cols=205 Identities=9% Similarity=-0.131 Sum_probs=156.6
Q ss_pred CHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH------HHHHHHH
Q 019734 120 NLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMD-KKEAAISLYRQAAVL--GDPAGQFNLGISYLQ------EEAVKLL 188 (336)
Q Consensus 120 ~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~-~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~------~~A~~~~ 188 (336)
..++|+.++++++.. .+..+++..+.++...+ ++++++.++.+++.. .+..+++..+.++.. ++++.++
T Consensus 69 ~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~ 148 (349)
T 3q7a_A 69 KSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYI 148 (349)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHH
Confidence 456899999999987 58999999999999998 699999999999865 799999999999876 7999999
Q ss_pred HHHHHc--CCHHHHHHHHHHHhcCCCCccCH--------HHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCC---CcccH
Q 019734 189 YQASIA--GHVRAQYQLALCLHRGRGVDFNL--------QEAARWYLRAAEG--GYVRAMYNTSLCYSFGEG---LPLSH 253 (336)
Q Consensus 189 ~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~--------~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g---~~~~~ 253 (336)
.++++. .+..++++.+.++.. .+.+ .+++.+++++++. .+..|+++.+.++....+ ....+
T Consensus 149 ~k~L~~dpkNy~AW~~R~wvl~~----l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~ 224 (349)
T 3q7a_A 149 HGSLLPDPKNYHTWAYLHWLYSH----FSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSL 224 (349)
T ss_dssp HHHTSSCTTCHHHHHHHHHHHHH----HHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHH----hccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHH
Confidence 999876 588999999988765 3333 3899999999764 689999999999965432 12237
Q ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCH--------------------HHHHHHHHHHHH--------cCcHHH
Q 019734 254 RQARKWMKRAADC--GHGKAQLEHGLGLFTEGEM--------------------MKAVVYLELATR--------AGETAA 303 (336)
Q Consensus 254 ~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~--------------------~~A~~~~~~A~~--------~~~~~a 303 (336)
+++++++++++.. ++..+++.+..++...|+. .+-.......+. ...+.+
T Consensus 225 ~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a 304 (349)
T 3q7a_A 225 QDELIYILKSIHLIPHNVSAWNYLRGFLKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPLA 304 (349)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCSGGGHHHHGGGTC--------------CCCCC-CCCSSCCSCCHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCcccccccccccccccccccchhHHHHHHHHHhcccccccCCCcHHH
Confidence 8999999999874 7788998888878776543 222222222222 134567
Q ss_pred HHHHHHHHhhcChhcHHHHHHHHHHhh
Q 019734 304 DHVKNVILQQLSATSRDRAMLVVDSWR 330 (336)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ 330 (336)
...+..++... ++.++|..+++.+.
T Consensus 305 l~~l~d~~~~~--~~~~~a~~~~~~l~ 329 (349)
T 3q7a_A 305 LEYLADSFIEQ--NRVDDAAKVFEKLS 329 (349)
T ss_dssp HHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc--CCHHHHHHHHHHHH
Confidence 77777776653 56688888888886
No 187
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.70 E-value=5.3e-08 Score=76.87 Aligned_cols=86 Identities=15% Similarity=0.124 Sum_probs=68.3
Q ss_pred hhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCC------CCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcC
Q 019734 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGR------GVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEM 150 (336)
Q Consensus 79 ~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~------g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~ 150 (336)
+.+++|+..+...++..|+ ++++++++|.++..-- +..+.+++|+..|++|++. .++++++++|.+|...
T Consensus 16 ~~feeA~~~~~~Ai~l~P~--~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPL--DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHh
Confidence 4588888888888888877 8999999999888710 0112357999999999987 4789999999999876
Q ss_pred C-----------CHHHHHHHHHHHHHc
Q 019734 151 D-----------KKEAAISLYRQAAVL 166 (336)
Q Consensus 151 ~-----------~~~~A~~~~~~a~~~ 166 (336)
| ++++|+.+|++|++.
T Consensus 94 g~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 94 AFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcchhhhhccHHHHHHHHHHHHHh
Confidence 4 788888888888765
No 188
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.70 E-value=5.9e-08 Score=91.48 Aligned_cols=110 Identities=11% Similarity=0.009 Sum_probs=94.9
Q ss_pred hcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCC
Q 019734 74 ASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMD 151 (336)
Q Consensus 74 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~ 151 (336)
.++..|++++|+..+.+.++..++ ++.+++.+|.+|.. .+++++|+.+|++|++. .++.+++++|.+|...|
T Consensus 15 ~~~~~g~~~~A~~~~~~Al~~~p~--~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 88 (477)
T 1wao_1 15 DYFKAKDYENAIKFYSQAIELNPS--NAIYYGNRSLAYLR----TECYGYALGDATRAIELDKKYIKGYYRRAASNMALG 88 (477)
T ss_dssp STTTTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHhCCHHHHHHHHHHHHHhCCc--cHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 446889999999999999999777 79999999999999 68999999999999997 58999999999999999
Q ss_pred CHHHHHHHHHHHHHc--CCHHHHHHHHHH--HHH----HHHHHHHH
Q 019734 152 KKEAAISLYRQAAVL--GDPAGQFNLGIS--YLQ----EEAVKLLY 189 (336)
Q Consensus 152 ~~~~A~~~~~~a~~~--~~~~a~~~Lg~~--~~~----~~A~~~~~ 189 (336)
++++|+.+|+++++. +++.++.+++.+ +.. ++|+..++
T Consensus 89 ~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 89 KFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp CHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999865 678899999988 554 88888888
No 189
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.69 E-value=8.6e-07 Score=81.57 Aligned_cols=195 Identities=10% Similarity=-0.042 Sum_probs=131.0
Q ss_pred HHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHhcCCCHHHHHHHHHH
Q 019734 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGS-------------------TLAMVDAGLMYWEMDKKEAAISLYRQ 162 (336)
Q Consensus 102 ~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~-------------------~~a~~~lg~~~~~~~~~~~A~~~~~~ 162 (336)
.+...-|.-+.. .+++++|+..|.++++... ..++.+||.+|...|++++|+.+|.+
T Consensus 5 ~~~l~~a~~l~~----~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~ 80 (434)
T 4b4t_Q 5 GSKLEEARRLVN----EKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPH 80 (434)
T ss_dssp THHHHHHHHHHH----HTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----CCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 344445555554 4678888888888776410 13567777777777777777777776
Q ss_pred HHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--------CC
Q 019734 163 AAVL--GDPAGQFNLGISYLQEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--------GY 232 (336)
Q Consensus 163 a~~~--~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--------~~ 232 (336)
+... ....+. ........+|.++.. .+++++|+.++++++.. ..
T Consensus 81 ~~~~~~~~~~~~----------------------~~~~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~ 134 (434)
T 4b4t_Q 81 STEYMMQFAKSK----------------------TVKVLKTLIEKFEQV----PDSLDDQIFVCEKSIEFAKREKRVFLK 134 (434)
T ss_dssp THHHHHTSCHHH----------------------HHHHHHHHHHHHCSC----CSCHHHHHHHHHHHHHHHHHSSCCSSH
T ss_pred HHHHHHHccchH----------------------HHHHHHHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHhCccHHH
Confidence 6532 110100 012334567777766 78999999999988642 23
Q ss_pred HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc----C----CHHHHHHHHHHhhccCCHHHHHHHHHHHHHc----C-
Q 019734 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC----G----HGKAQLEHGLGLFTEGEMMKAVVYLELATRA----G- 299 (336)
Q Consensus 233 ~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~----~----~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~----~- 299 (336)
.....+||.+|.. .+++.+|...++.+... + ....+..+|.+|...|++++|..+|+++... +
T Consensus 135 ~~~~~~la~~~~~----~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 210 (434)
T 4b4t_Q 135 HSLSIKLATLHYQ----KKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYC 210 (434)
T ss_dssp HHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHH----ccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCC
Confidence 6788999999976 33999999999999762 1 2567799999999999999999999999863 2
Q ss_pred cH--HHHHHHHHHHhhcChhcHHHHHHHHHHhh
Q 019734 300 ET--AADHVKNVILQQLSATSRDRAMLVVDSWR 330 (336)
Q Consensus 300 ~~--~a~~~~~~~~~~~~~~~~~~a~~~~~~~~ 330 (336)
++ .+.........+....+.++|.....+..
T Consensus 211 ~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~ 243 (434)
T 4b4t_Q 211 PTQTVAELDLMSGILHCEDKDYKTAFSYFFESF 243 (434)
T ss_dssp CHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 22 23333444444556666777666555443
No 190
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.69 E-value=1.4e-06 Score=85.27 Aligned_cols=206 Identities=9% Similarity=-0.052 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHH
Q 019734 123 KALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAI-SLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASI 193 (336)
Q Consensus 123 ~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~-~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~ 193 (336)
.....|++|+.. .+++.|+..+..+...|+.++|+ ..|.+|+.. .+...++.++.+... ++|...|+++++
T Consensus 327 Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~ 406 (679)
T 4e6h_A 327 RMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCID 406 (679)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 345567777664 46777777777776667767775 777777653 344444445555444 666666776654
Q ss_pred cC------------------------CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC-C--CHHHHHHHHHHHHcC
Q 019734 194 AG------------------------HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG-G--YVRAMYNTSLCYSFG 246 (336)
Q Consensus 194 ~~------------------------~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~-~--~~~a~~~lg~~~~~~ 246 (336)
.. .+.++...+.+... .++.+.|...|.+|.+. . ....+...+.+-...
T Consensus 407 ~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR----~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~ 482 (679)
T 4e6h_A 407 RIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKR----IQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHI 482 (679)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHH----HHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTT
T ss_pred HHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHh
Confidence 20 12345555555554 45677788888887654 2 344444445444332
Q ss_pred CCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcH--HH-HHHHHHHHhhcChhcHHH
Q 019734 247 EGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGET--AA-DHVKNVILQQLSATSRDR 321 (336)
Q Consensus 247 ~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~--~a-~~~~~~~~~~~~~~~~~~ 321 (336)
. ++.+.|...|+++++. .++..+...+......|+.+.|..+|++|+....+ .. ......+......++.+.
T Consensus 483 ~---~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~ 559 (679)
T 4e6h_A 483 S---KDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNS 559 (679)
T ss_dssp T---SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHH
T ss_pred C---CCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 2 2577888888888774 44554455555556677888888888888776541 22 222222222223355556
Q ss_pred HHHHHHHhhcCCCC
Q 019734 322 AMLVVDSWRAMPSL 335 (336)
Q Consensus 322 a~~~~~~~~~~~~~ 335 (336)
+..+.+++.+..|.
T Consensus 560 ~~~v~~R~~~~~P~ 573 (679)
T 4e6h_A 560 VRTLEKRFFEKFPE 573 (679)
T ss_dssp HHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhCCC
Confidence 66666666655553
No 191
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.68 E-value=1.9e-07 Score=69.50 Aligned_cols=91 Identities=13% Similarity=0.086 Sum_probs=66.7
Q ss_pred hhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHH
Q 019734 83 AASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLY 160 (336)
Q Consensus 83 ~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~ 160 (336)
+++..+.+.++..|+ ++.+++.+|.+|.. .+++++|+.+|++++.. .++.+++.+|.+|...|++++|+.+|
T Consensus 3 ~a~~~~~~al~~~p~--~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~ 76 (115)
T 2kat_A 3 AITERLEAMLAQGTD--NMLLRFTLGKTYAE----HEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAW 76 (115)
T ss_dssp CHHHHHHHHHTTTCC--CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC--cHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 345555666666555 78888888888887 57888888888888876 46788888888888888888888888
Q ss_pred HHHHHc----CCHHHHHHHHHHH
Q 019734 161 RQAAVL----GDPAGQFNLGISY 179 (336)
Q Consensus 161 ~~a~~~----~~~~a~~~Lg~~~ 179 (336)
+++++. ++..+...+...+
T Consensus 77 ~~al~~~~~~~~~~~~~~l~~~l 99 (115)
T 2kat_A 77 ESGLAAAQSRGDQQVVKELQVFL 99 (115)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHhccccccHHHHHHHHHHH
Confidence 888753 4555544444333
No 192
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.66 E-value=2.5e-07 Score=67.82 Aligned_cols=78 Identities=9% Similarity=0.074 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CC------H
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GD------P 169 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~------~ 169 (336)
++.+++.+|.++.. .+++++|+.+|++++.. .++.+++++|.++...|++++|+.+|+++++. ++ .
T Consensus 3 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 78 (111)
T 2l6j_A 3 QFEKQKEQGNSLFK----QGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRS 78 (111)
T ss_dssp HHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHH
T ss_pred hHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHH
Confidence 46788889999988 58999999999999886 57899999999999999999999999999865 45 6
Q ss_pred HHHHHHHHHHHH
Q 019734 170 AGQFNLGISYLQ 181 (336)
Q Consensus 170 ~a~~~Lg~~~~~ 181 (336)
.+++.+|.++..
T Consensus 79 ~~~~~~~~~~~~ 90 (111)
T 2l6j_A 79 KLQYRLELAQGA 90 (111)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 677777776653
No 193
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.66 E-value=2.3e-07 Score=73.16 Aligned_cols=94 Identities=10% Similarity=0.059 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHc--
Q 019734 119 KNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIA-- 194 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~~~A~~~~~ka~~~-- 194 (336)
+.+++|+..|+++++. +++++++++|.++...++++.+..... ..++|+..|++|++.
T Consensus 16 ~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~------------------~~~eAi~~le~AL~ldP 77 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQ------------------MIQEAITKFEEALLIDP 77 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHH------------------HHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHh------------------HHHHHHHHHHHHHHhCc
Confidence 3566777777777665 467777777777766554331111000 003455555555443
Q ss_pred CCHHHHHHHHHHHhc-CCCC------ccCHHHHHHHHHHHHHC
Q 019734 195 GHVRAQYQLALCLHR-GRGV------DFNLQEAARWYLRAAEG 230 (336)
Q Consensus 195 ~~~~a~~~lg~~~~~-g~g~------~~~~~~A~~~~~~a~~~ 230 (336)
+++++++++|.+|.. |.-+ .+++++|+.+|++|++.
T Consensus 78 ~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 78 KKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 355555555555543 0000 13677777777777654
No 194
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.65 E-value=3e-07 Score=66.95 Aligned_cols=77 Identities=17% Similarity=0.202 Sum_probs=64.4
Q ss_pred CCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CCHHHH
Q 019734 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL----GDPAGQ 172 (336)
Q Consensus 99 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----~~~~a~ 172 (336)
.++.+++.+|.+|.. .+++++|+.+|+++++. .++.+++.+|.+|...|++++|+.+|+++++. ++..+.
T Consensus 5 ~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~ 80 (100)
T 3ma5_A 5 EDPFTRYALAQEHLK----HDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDL 80 (100)
T ss_dssp CCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred cCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHH
Confidence 378999999999998 58999999999999987 57889999999999999999999999999854 555555
Q ss_pred HHHHHHH
Q 019734 173 FNLGISY 179 (336)
Q Consensus 173 ~~Lg~~~ 179 (336)
..+..++
T Consensus 81 ~~l~~~l 87 (100)
T 3ma5_A 81 SELQDAK 87 (100)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554444
No 195
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.59 E-value=4e-06 Score=73.71 Aligned_cols=165 Identities=12% Similarity=-0.010 Sum_probs=126.3
Q ss_pred hhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHhcCCCHHHHHHH
Q 019734 84 ASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----GSTLAMVDAGLMYWEMDKKEAAISL 159 (336)
Q Consensus 84 a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~~~~a~~~lg~~~~~~~~~~~A~~~ 159 (336)
++..+.++++.. .+...+++.+|.++.. .+++++|++++.+.+.. ++.++...++.++...|+++.|.+.
T Consensus 85 a~~~l~~l~~~~--~~~~~~~~~la~i~~~----~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~ 158 (310)
T 3mv2_B 85 NIEELENLLKDK--QNSPYELYLLATAQAI----LGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTI 158 (310)
T ss_dssp CCHHHHHTTTTS--CCCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhcC--CCCcHHHHHHHHHHHH----cCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHH
Confidence 655555555443 2357778899999999 69999999999999876 4688999999999999999999999
Q ss_pred HHHHHHcCC------HHHHHHHHHHHHH--------HHHHHHHHHHHHcC-C---HHHHHHHHHHHhcCCCCccCHHHHH
Q 019734 160 YRQAAVLGD------PAGQFNLGISYLQ--------EEAVKLLYQASIAG-H---VRAQYQLALCLHRGRGVDFNLQEAA 221 (336)
Q Consensus 160 ~~~a~~~~~------~~a~~~Lg~~~~~--------~~A~~~~~ka~~~~-~---~~a~~~lg~~~~~g~g~~~~~~~A~ 221 (336)
+++..+... -.....|+..+.. .+|+..|+.+.+.. . +...++ ++.. .+++++|.
T Consensus 159 l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~----~g~~~eAe 231 (310)
T 3mv2_B 159 FDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQ----QRNIAEAQ 231 (310)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHH----HTCHHHHH
T ss_pred HHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHH----cCCHHHHH
Confidence 998876644 4556666655433 89999999987653 2 334444 6666 78999999
Q ss_pred HHHHHHH------------HCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC
Q 019734 222 RWYLRAA------------EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 267 (336)
Q Consensus 222 ~~~~~a~------------~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~ 267 (336)
..++... +++++++..++..+.... | + +|.++++++....
T Consensus 232 ~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~l-g---k--~a~~l~~qL~~~~ 283 (310)
T 3mv2_B 232 GIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQ-G---L--DTEDLTNQLVKLD 283 (310)
T ss_dssp HHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHT-T---C--TTHHHHHHHHHTT
T ss_pred HHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHh-C---h--HHHHHHHHHHHhC
Confidence 9998653 367899998887776542 3 3 7889999988753
No 196
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.51 E-value=2.2e-06 Score=63.61 Aligned_cols=71 Identities=17% Similarity=0.061 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHH
Q 019734 123 KALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASI 193 (336)
Q Consensus 123 ~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~ 193 (336)
+|+.+|++++.. .++.+++.+|.+|...|++++|+.+|+++++. .++.+++++|.+|.. ++|+.+|+++++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 578889998876 57899999999999999999999999998854 567777777777766 666666666654
No 197
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.46 E-value=1.2e-07 Score=69.58 Aligned_cols=87 Identities=16% Similarity=0.023 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CC----
Q 019734 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GH---- 268 (336)
Q Consensus 197 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~---- 268 (336)
+.+++.+|.++.. .+++++|+.+|++++. +.++.+++++|.+|.... ++++|+.+|++++.. ++
T Consensus 4 ~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g----~~~~A~~~~~~al~~~p~~~~~~ 75 (111)
T 2l6j_A 4 FEKQKEQGNSLFK----QGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLG----EYTQAIQMCQQGLRYTSTAEHVA 75 (111)
T ss_dssp HHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHTSCSSTTSHH
T ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHhCCCccHHH
Confidence 4566667777666 6677777777777654 356667777777775422 677777777777664 23
Q ss_pred --HHHHHHHHHHhhccCCHHHHHHH
Q 019734 269 --GKAQLEHGLGLFTEGEMMKAVVY 291 (336)
Q Consensus 269 --~~a~~~lg~~~~~~~~~~~A~~~ 291 (336)
..+++.+|.++...|++++|+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~a~~~ 100 (111)
T 2l6j_A 76 IRSKLQYRLELAQGAVGSVQIPVVE 100 (111)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHhHhhhHhH
Confidence 44556666666665555544443
No 198
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.42 E-value=2.7e-06 Score=61.75 Aligned_cols=66 Identities=6% Similarity=-0.164 Sum_probs=52.6
Q ss_pred HCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 229 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 229 ~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
++.++.+++.+|.+|... +++++|+.+|+++++. +++.+++++|.+|...|++++|+.+|+++++.
T Consensus 3 ~p~~~~~~~~lg~~~~~~----g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKH----DNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp --CCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 456788888888888653 3888888888888875 56788888999888899999999999888864
No 199
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.40 E-value=3.1e-06 Score=59.46 Aligned_cols=76 Identities=21% Similarity=0.224 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHH
Q 019734 197 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQ 272 (336)
Q Consensus 197 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~ 272 (336)
+.+++.+|.++.. .+++++|+.+|+++++. .+..+++++|.+|... +++++|+.+|++++.. +++.++
T Consensus 9 ~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~----~~~~~A~~~~~~a~~~~p~~~~~~ 80 (91)
T 1na3_A 9 AEAWYNLGNAYYK----QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ----GDYDEAIEYYQKALELDPNNAEAK 80 (91)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHH----ccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH----hhHHHHHHHHHHHHhcCCCCHHHH
Confidence 3445555555554 45555555555555432 3455555555555432 1555555555555443 334445
Q ss_pred HHHHHHhh
Q 019734 273 LEHGLGLF 280 (336)
Q Consensus 273 ~~lg~~~~ 280 (336)
.++|.++.
T Consensus 81 ~~l~~~~~ 88 (91)
T 1na3_A 81 QNLGNAKQ 88 (91)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 200
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.39 E-value=6e-05 Score=73.77 Aligned_cols=206 Identities=5% Similarity=-0.155 Sum_probs=151.7
Q ss_pred HhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHH-HHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHH
Q 019734 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKAL-DSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAIS 158 (336)
Q Consensus 82 ~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~-~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~ 158 (336)
.....+|.+.+...|. .+..|+..+..... .++.++|. ..|++|+.. .+...++.++.+....|++++|..
T Consensus 326 ~Rv~~~Ye~aL~~~p~--~~~lW~~ya~~~~~----~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~ 399 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCF--APEIWFNMANYQGE----KNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIET 399 (679)
T ss_dssp HHHHHHHHHHHHHTTT--CHHHHHHHHHHHHH----HSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCC--CHHHHHHHHHHHHh----cCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 3455678888888777 89999999998877 46778897 999999976 466678889999999999999999
Q ss_pred HHHHHHHcC------------------------CHHHHHHHHHHHHH----HHHHHHHHHHHHc-C--CHHHHHHHHHHH
Q 019734 159 LYRQAAVLG------------------------DPAGQFNLGISYLQ----EEAVKLLYQASIA-G--HVRAQYQLALCL 207 (336)
Q Consensus 159 ~~~~a~~~~------------------------~~~a~~~Lg~~~~~----~~A~~~~~ka~~~-~--~~~a~~~lg~~~ 207 (336)
.|.++++.. ....|..++.+... +.|...|.+|++. . ....+...+.+-
T Consensus 400 iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE 479 (679)
T 4e6h_A 400 TILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIE 479 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 999998631 12234444444333 8999999999886 3 356666666665
Q ss_pred hcCCCCccCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCC-----HHHHHHHHHHhh
Q 019734 208 HRGRGVDFNLQEAARWYLRAAEG--GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH-----GKAQLEHGLGLF 280 (336)
Q Consensus 208 ~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~-----~~a~~~lg~~~~ 280 (336)
.. +.++.+.|...|+++++. .++..+...+..... .++.+.|..+|++++.... ...+......-.
T Consensus 480 ~~---~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~----~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~ 552 (679)
T 4e6h_A 480 YH---ISKDTKTACKVLELGLKYFATDGEYINKYLDFLIY----VNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFES 552 (679)
T ss_dssp HT---TTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHH
T ss_pred HH---hCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh----CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 44 135689999999999874 566666566665433 2389999999999998643 223334444445
Q ss_pred ccCCHHHHHHHHHHHHHcCc
Q 019734 281 TEGEMMKAVVYLELATRAGE 300 (336)
Q Consensus 281 ~~~~~~~A~~~~~~A~~~~~ 300 (336)
..|+.+.+...++++.+.-+
T Consensus 553 ~~G~~~~~~~v~~R~~~~~P 572 (679)
T 4e6h_A 553 KVGSLNSVRTLEKRFFEKFP 572 (679)
T ss_dssp HTCCSHHHHHHHHHHHHHST
T ss_pred HcCCHHHHHHHHHHHHHhCC
Confidence 68999999999999988643
No 201
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.37 E-value=3e-06 Score=62.11 Aligned_cols=73 Identities=10% Similarity=-0.023 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc---------CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH--cCC
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR---------GSTLAMVDAGLMYWEMDKKEAAISLYRQAAV--LGD 168 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~---------~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~ 168 (336)
.+.-++.||..+.. .+++..|+.||++|++. ..+..+..||.+++..|++++|+.++++++. +++
T Consensus 4 sa~dc~~lG~~~~~----~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 4 TAEDCFELGKVAYT----EADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHH----ccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 56789999999999 68999999999999874 2467889999999999999999999999975 478
Q ss_pred HHHHHHHH
Q 019734 169 PAGQFNLG 176 (336)
Q Consensus 169 ~~a~~~Lg 176 (336)
+.+..+++
T Consensus 80 ~~~~~n~~ 87 (104)
T 2v5f_A 80 QRANGNLK 87 (104)
T ss_dssp HHHHHHHH
T ss_pred HHHHhhHH
Confidence 88888776
No 202
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.24 E-value=2.3e-05 Score=73.83 Aligned_cols=125 Identities=10% Similarity=-0.047 Sum_probs=87.0
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHhcCCCCccCHHHH
Q 019734 144 GLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQEEAVKLLYQASIAGH---VRAQYQLALCLHRGRGVDFNLQEA 220 (336)
Q Consensus 144 g~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~---~~a~~~lg~~~~~g~g~~~~~~~A 220 (336)
+..+...|++++|+.+|+++++. .++.+-.++ ..++.+||.+|.. .+++++|
T Consensus 316 a~~~~~qg~~~eA~~l~~~aL~~---------------------~~~~lg~~Hp~~a~~~~nLa~~y~~----~g~~~eA 370 (490)
T 3n71_A 316 IDKARSEGLYHEVVKLCRECLEK---------------------QEPVFADTNLYVLRLLSIASEVLSY----LQAYEEA 370 (490)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHH---------------------HTTTBCTTSHHHHHHHHHHHHHHHH----TTCHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHH---------------------HHHhcCCCCHHHHHHHHHHHHHHHH----hcCHHHH
Confidence 34455778888888888887642 001111112 3456677777776 7888888
Q ss_pred HHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc-------CCHH---HHHHHHHHhh
Q 019734 221 ARWYLRAAEG-------GY---VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC-------GHGK---AQLEHGLGLF 280 (336)
Q Consensus 221 ~~~~~~a~~~-------~~---~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~-------~~~~---a~~~lg~~~~ 280 (336)
+.+|+++++. .+ ..++++||.+|... | ++++|..+|++|++. +++. ...+|+.++.
T Consensus 371 ~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~-G---~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~ 446 (490)
T 3n71_A 371 SHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHA-G---HIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEM 446 (490)
T ss_dssp HHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHT-T---CHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHC-C---CHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH
Confidence 8888888642 22 55678889888653 2 899999999998862 3443 3468888899
Q ss_pred ccCCHHHHHHHHHHHHH
Q 019734 281 TEGEMMKAVVYLELATR 297 (336)
Q Consensus 281 ~~~~~~~A~~~~~~A~~ 297 (336)
+++.+++|...|.++.+
T Consensus 447 e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 447 ELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998854
No 203
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.20 E-value=5.7e-05 Score=71.10 Aligned_cols=85 Identities=13% Similarity=0.150 Sum_probs=44.2
Q ss_pred CCChhHHhhhHHHHHHHHHhCC-C--C---CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc-------CCH---HH
Q 019734 76 FTLPQLRAASLVCKSWNDALRP-L--R---EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR-------GST---LA 139 (336)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~-~--~---~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~-------~~~---~a 139 (336)
...|++++|..++.+.++.... . . .+..+.+||.+|.. .+++++|+.++++++.. +|+ .+
T Consensus 320 ~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~----~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~ 395 (490)
T 3n71_A 320 RSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY----LQAYEEASHYARRMVDGYMKLYHHNNAQLGMA 395 (490)
T ss_dssp HTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 3555566665555555554321 0 1 23345555555555 35566666666655532 132 34
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHH
Q 019734 140 MVDAGLMYWEMDKKEAAISLYRQAA 164 (336)
Q Consensus 140 ~~~lg~~~~~~~~~~~A~~~~~~a~ 164 (336)
+++||.+|...|++++|+.+|++|+
T Consensus 396 l~nLa~~~~~~G~~~eA~~~~~~Al 420 (490)
T 3n71_A 396 VMRAGLTNWHAGHIEVGHGMICKAY 420 (490)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4556666666666666666555554
No 204
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.08 E-value=3.5e-05 Score=56.29 Aligned_cols=76 Identities=9% Similarity=0.068 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc---------CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC--cH
Q 019734 233 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---------GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG--ET 301 (336)
Q Consensus 233 ~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~---------~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~--~~ 301 (336)
+.-++.||..+... +++..|+.||++|+.. ..+..+.+||.+|++.|++++|+.++++++... ++
T Consensus 5 a~dc~~lG~~~~~~----~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 5 AEDCFELGKVAYTE----ADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp HHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHc----cchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 45566777777653 3777777777777662 235667899999999999999999999998764 45
Q ss_pred HHHHHHHHHHh
Q 019734 302 AADHVKNVILQ 312 (336)
Q Consensus 302 ~a~~~~~~~~~ 312 (336)
.+..++..+..
T Consensus 81 ~~~~n~~~~~~ 91 (104)
T 2v5f_A 81 RANGNLKYFEY 91 (104)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHhhHHHHHH
Confidence 55555554333
No 205
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.07 E-value=1.9e-05 Score=56.53 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=59.5
Q ss_pred HHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHH
Q 019734 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTL-AMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISY 179 (336)
Q Consensus 105 ~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~-a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~ 179 (336)
+.+|.++.. .+++++|+.+|++++.. .++. +++.+|.+|...|++++|+.+|+++++. +++.++++ .
T Consensus 4 ~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~----~ 75 (99)
T 2kc7_A 4 LKTIKELIN----QGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR----K 75 (99)
T ss_dssp HHHHHHHHH----HTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH----H
T ss_pred HHHHHHHHH----cCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH----H
Confidence 556777777 58999999999999886 4778 9999999999999999999999998865 56666633 0
Q ss_pred HHHHHHHHHHHH
Q 019734 180 LQEEAVKLLYQA 191 (336)
Q Consensus 180 ~~~~A~~~~~ka 191 (336)
...+++.+|+++
T Consensus 76 ~~~~a~~~~~~~ 87 (99)
T 2kc7_A 76 MVMDILNFYNKD 87 (99)
T ss_dssp HHHHHHHHHCCT
T ss_pred HHHHHHHHHHHH
Confidence 014555556554
No 206
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.03 E-value=7.2e-06 Score=58.82 Aligned_cols=59 Identities=14% Similarity=-0.072 Sum_probs=36.0
Q ss_pred HHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHH-HHHHHHHHhhccCCHHHHHHHHHHHHHcCc
Q 019734 238 NTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGK-AQLEHGLGLFTEGEMMKAVVYLELATRAGE 300 (336)
Q Consensus 238 ~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~-a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~ 300 (336)
..|.++.. .+++++|+.+|++++.. .++. +++++|.+|...|++++|+.+|+++++..+
T Consensus 5 ~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 66 (99)
T 2kc7_A 5 KTIKELIN----QGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNP 66 (99)
T ss_dssp HHHHHHHH----HTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHH----cCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 44555543 22666666666666654 3455 666667666667777777777777666543
No 207
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.03 E-value=0.00013 Score=63.00 Aligned_cols=90 Identities=10% Similarity=-0.062 Sum_probs=70.0
Q ss_pred CCCccCHHHHHHHHHHHHHCC----CHHHHHHHHHHHHcC-CCCcccHHHHHHHHHHHHHcC---CHHHHHHHHHHhhc-
Q 019734 211 RGVDFNLQEAARWYLRAAEGG----YVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCG---HGKAQLEHGLGLFT- 281 (336)
Q Consensus 211 ~g~~~~~~~A~~~~~~a~~~~----~~~a~~~lg~~~~~~-~g~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~- 281 (336)
++.......|...+++|++.+ +..++..||.+|..- ...-++.++|.++|++|++.+ +..+.+..|..+..
T Consensus 173 ~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~ 252 (301)
T 3u64_A 173 SALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIP 252 (301)
T ss_dssp SCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTT
T ss_pred hHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHh
Confidence 456677888888899987653 466899999998763 000129999999999998852 38888999998877
Q ss_pred cCCHHHHHHHHHHHHHcCc
Q 019734 282 EGEMMKAVVYLELATRAGE 300 (336)
Q Consensus 282 ~~~~~~A~~~~~~A~~~~~ 300 (336)
.|++++|..++++|+...+
T Consensus 253 ~gd~~~a~~~L~kAL~a~p 271 (301)
T 3u64_A 253 LNNRAGFDEALDRALAIDP 271 (301)
T ss_dssp TTCHHHHHHHHHHHHHCCG
T ss_pred cCCHHHHHHHHHHHHcCCC
Confidence 4999999999999998653
No 208
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.01 E-value=5.7e-05 Score=58.89 Aligned_cols=99 Identities=11% Similarity=0.120 Sum_probs=80.2
Q ss_pred cCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC----CHHHHHHHHHHhhccCCHHHH
Q 019734 215 FNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG----HGKAQLEHGLGLFTEGEMMKA 288 (336)
Q Consensus 215 ~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~----~~~a~~~lg~~~~~~~~~~~A 288 (336)
.+...+...|.+... ..+.++.+++|+++.+.. .+.+.++++..++..++.+ +.+..|+||..|++.|+|++|
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~-~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSK-YNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCS-SHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHH
Confidence 456677788888766 457999999999997643 3558889999999999876 256789999999999999999
Q ss_pred HHHHHHHHHcC--cHHHHHHHHHHHhhc
Q 019734 289 VVYLELATRAG--ETAADHVKNVILQQL 314 (336)
Q Consensus 289 ~~~~~~A~~~~--~~~a~~~~~~~~~~~ 314 (336)
..+++++++.. +..|......+...+
T Consensus 91 ~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 91 LKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 99999999864 577777777665544
No 209
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.00 E-value=0.00024 Score=63.63 Aligned_cols=152 Identities=11% Similarity=-0.044 Sum_probs=88.7
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC
Q 019734 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167 (336)
Q Consensus 90 ~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~ 167 (336)
...+..|....+--+|..|..+.. .+...++.+|+.+|++|++. +++.++-.++.+|... ......
T Consensus 185 r~~~~~p~~~~Aydl~Lra~~~l~-~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~-----------~~~~~~ 252 (372)
T 3ly7_A 185 TLQKILPHRGALLTNFYQAHDYLL-HGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVR-----------HSQHPL 252 (372)
T ss_dssp HHHHHSCSSGGGHHHHHHHHHHHH-HCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------HHHSCC
T ss_pred HHhccCCCCHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-----------hccCCC
Confidence 455566665667777777877765 24466789999999999987 5778888877777511 000000
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCC-CHHHHHHHHHHHH
Q 019734 168 DPAGQFNLGISYLQEEAVKLLYQA--SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG-YVRAMYNTSLCYS 244 (336)
Q Consensus 168 ~~~a~~~Lg~~~~~~~A~~~~~ka--~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~ 244 (336)
.......+ ..++... .+ ....++.++..++..+.. .+++++|+.++++|+..+ +..++..+|.++.
T Consensus 253 ~~~~~~~l------~~a~~a~-~a~~~~~~~a~~~~alal~~l~----~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~ 321 (372)
T 3ly7_A 253 DEKQLAAL------NTEIDNI-VTLPELNNLSIIYQIKAVSALV----KGKTDESYQAINTGIDLEMSWLNYVLLGKVYE 321 (372)
T ss_dssp CHHHHHHH------HHHHHHH-HTCGGGTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred chhhHHHH------HHHHHHH-HhcccCCcCHHHHHHHHHHHHh----CCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 00000000 1111100 01 123456666666665554 567777777777776553 4455566677775
Q ss_pred cCCCCcccHHHHHHHHHHHHHcCC
Q 019734 245 FGEGLPLSHRQARKWMKRAADCGH 268 (336)
Q Consensus 245 ~~~g~~~~~~~A~~~~~~a~~~~~ 268 (336)
. .++.++|+.+|.+|+..++
T Consensus 322 ~----~G~~~eA~e~~~~AlrL~P 341 (372)
T 3ly7_A 322 M----KGMNREAADAYLTAFNLRP 341 (372)
T ss_dssp H----TTCHHHHHHHHHHHHHHSC
T ss_pred H----CCCHHHHHHHHHHHHhcCC
Confidence 3 2277777777777777644
No 210
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.91 E-value=0.00055 Score=61.34 Aligned_cols=70 Identities=9% Similarity=-0.145 Sum_probs=57.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCC-HHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcHHH
Q 019734 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH-GKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAA 303 (336)
Q Consensus 230 ~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~-~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~a 303 (336)
..++.++..++..+.. .+++++|+.++++|+..++ ..++..+|.++.-.|++++|...|++|++.++...
T Consensus 274 ~~~a~~~~alal~~l~----~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALV----KGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp TTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred CcCHHHHHHHHHHHHh----CCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 4677888778777643 2399999999999999754 55567889999999999999999999999876543
No 211
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.81 E-value=0.00027 Score=55.09 Aligned_cols=76 Identities=7% Similarity=-0.001 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC----CHHHHHHHHHHHhcCCCHHHHHHHHHHHHH--cCCHHHH
Q 019734 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG----STLAMVDAGLMYWEMDKKEAAISLYRQAAV--LGDPAGQ 172 (336)
Q Consensus 99 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~----~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~ 172 (336)
.+.++.|.+|.++.+ ...+.+.++++..|+..++.+ +.+++|+||..|++.+++++|+.+++++++ +++..|.
T Consensus 30 ~~~~~~F~ya~~Lv~-S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~ 108 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVR-SKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAK 108 (152)
T ss_dssp CCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 489999999999998 333447889999999999876 368999999999999999999999999975 4778876
Q ss_pred HHH
Q 019734 173 FNL 175 (336)
Q Consensus 173 ~~L 175 (336)
...
T Consensus 109 ~Lk 111 (152)
T 1pc2_A 109 ELE 111 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 212
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.77 E-value=0.00011 Score=68.08 Aligned_cols=80 Identities=13% Similarity=-0.056 Sum_probs=67.0
Q ss_pred ccCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc-------CCH---HHHH
Q 019734 214 DFNLQEAARWYLRAAEG-------GY---VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC-------GHG---KAQL 273 (336)
Q Consensus 214 ~~~~~~A~~~~~~a~~~-------~~---~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~-------~~~---~a~~ 273 (336)
.+++++|+..|+++++. .+ ..++.+||.+|.. .+++++|..+++++++. .++ ..++
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~----~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~ 386 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY----MQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWL 386 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh----hcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 46899999999999762 22 5678899999965 33999999999999872 343 4569
Q ss_pred HHHHHhhccCCHHHHHHHHHHHHH
Q 019734 274 EHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 274 ~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
+||.+|..+|++++|..+|++|++
T Consensus 387 nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 387 KLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCHHHHHHHHHHHHH
Confidence 999999999999999999999986
No 213
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.77 E-value=0.00012 Score=52.36 Aligned_cols=71 Identities=7% Similarity=-0.059 Sum_probs=59.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcH
Q 019734 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGET 301 (336)
Q Consensus 230 ~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~ 301 (336)
+.++..+..+|.++....+ ....++|..++++++.. +++.+.+.||..++..|++++|+.+|++.++..++
T Consensus 3 p~~~~~~~~~a~al~~~~~-~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHK-QAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTT-TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCCHHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 5678888888888854322 23578999999999875 67899999999999999999999999999988765
No 214
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.76 E-value=0.00017 Score=51.57 Aligned_cols=69 Identities=10% Similarity=-0.153 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCC
Q 019734 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168 (336)
Q Consensus 99 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~ 168 (336)
.+++.+..+|.++... +-....++|..+|++|+.. .++.+.+.+|..++..|++++|+.+++++++.+.
T Consensus 4 ~~~~~~~~~a~al~~~-~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p 74 (93)
T 3bee_A 4 VTATQLAAKATTLYYL-HKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSND 74 (93)
T ss_dssp CCHHHHHHHHHHHHHT-TTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Confidence 4789999999998652 1124579999999999987 5899999999999999999999999999997643
No 215
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.74 E-value=0.00018 Score=66.60 Aligned_cols=84 Identities=12% Similarity=0.046 Sum_probs=39.9
Q ss_pred CChhHHhhhHHHHHHHHHhCC---CC---CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc-----C--CH---HHH
Q 019734 77 TLPQLRAASLVCKSWNDALRP---LR---EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR-----G--ST---LAM 140 (336)
Q Consensus 77 ~~~~~~~a~~~~~~~~~~~~~---~~---~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~-----~--~~---~a~ 140 (336)
..|++++|..++.+.++.... .. .+..+.+||.+|.. .|++++|+.+|++++.. | |+ ..+
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~----~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l 385 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY----MQDWEGALKYGQKIIKPYSKHYPVYSLNVASMW 385 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh----hcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHH
Confidence 334555555555555543211 01 12344455555554 34555555555555432 1 22 234
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHH
Q 019734 141 VDAGLMYWEMDKKEAAISLYRQAA 164 (336)
Q Consensus 141 ~~lg~~~~~~~~~~~A~~~~~~a~ 164 (336)
++||.+|...|++++|+.+|++|+
T Consensus 386 ~nLa~~~~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 386 LKLGRLYMGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHHHHH
Confidence 555555555555555555555554
No 216
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.72 E-value=0.0045 Score=58.33 Aligned_cols=110 Identities=7% Similarity=-0.132 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCcccHHH
Q 019734 182 EEAVKLLYQASIAG---HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG---YVRAMYNTSLCYSFGEGLPLSHRQ 255 (336)
Q Consensus 182 ~~A~~~~~ka~~~~---~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~g~~~~~~~ 255 (336)
++|...|+...+.| +...+..|-..|.. .++.++|..+|+...+.| +...+..|-..|.+. ++.++
T Consensus 87 ~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~----~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~----g~~~~ 158 (501)
T 4g26_A 87 SRGFDIFKQMIVDKVVPNEATFTNGARLAVA----KDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRK----GDADK 158 (501)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHT----TCHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHC----CCHHH
Confidence 34555555544443 44455555555555 567777777777766554 555565555555442 27777
Q ss_pred HHHHHHHHHHcC---CHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 256 ARKWMKRAADCG---HGKAQLEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 256 A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
|...|+...+.| +...+..|-..|.+.|+.++|..+|++..+.+
T Consensus 159 A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g 205 (501)
T 4g26_A 159 AYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLV 205 (501)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhC
Confidence 777777776653 35556666667777777777777777776654
No 217
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.63 E-value=0.00019 Score=61.97 Aligned_cols=113 Identities=12% Similarity=0.026 Sum_probs=77.7
Q ss_pred hhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCC-CcCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHhc-CCCH
Q 019734 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-VRKNLDKALDSFLKGAARG---STLAMVDAGLMYWE-MDKK 153 (336)
Q Consensus 79 ~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g-~~~~~~~A~~~~~~A~~~~---~~~a~~~lg~~~~~-~~~~ 153 (336)
+....|.....+.++..|...+..++..||.+|..--. .-||.++|..+|++|++++ +..+.+.+|..+.. .+|.
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~ 256 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNR 256 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCH
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCH
Confidence 44557777777777777665567788889998887110 1278999999999998872 48888888888877 4889
Q ss_pred HHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHH
Q 019734 154 EAAISLYRQAAVLGDPA-GQFNLGISYLQEEAVKLLYQA 191 (336)
Q Consensus 154 ~~A~~~~~~a~~~~~~~-a~~~Lg~~~~~~~A~~~~~ka 191 (336)
++|..++++++....-. .-..+.+...+.+|..++.++
T Consensus 257 ~~a~~~L~kAL~a~p~~~P~~~lan~~~q~eA~~LL~~~ 295 (301)
T 3u64_A 257 AGFDEALDRALAIDPESVPHNKLLVILSQKRARWLKAHV 295 (301)
T ss_dssp HHHHHHHHHHHHCCGGGCSSCHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHcCCCCCCCChhHHHHHHHHHHHHHHHHh
Confidence 99999999988653211 223455555555555554443
No 218
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.46 E-value=0.00031 Score=64.99 Aligned_cols=75 Identities=15% Similarity=-0.023 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHHHc-------CC---HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-------CCH---HHHHHHHHH
Q 019734 119 KNLDKALDSFLKGAAR-------GS---TLAMVDAGLMYWEMDKKEAAISLYRQAAVL-------GDP---AGQFNLGIS 178 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~-------~~---~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-------~~~---~a~~~Lg~~ 178 (336)
+++++|+..|+++++. .| ..++.+||.+|...|++++|+.+++++++. .+| ..+++||.+
T Consensus 301 g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~ 380 (429)
T 3qwp_A 301 WKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKL 380 (429)
T ss_dssp TCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHH
Confidence 3566666666666542 12 244556666666666666666666665532 222 345566666
Q ss_pred HHH----HHHHHHHHHHHH
Q 019734 179 YLQ----EEAVKLLYQASI 193 (336)
Q Consensus 179 ~~~----~~A~~~~~ka~~ 193 (336)
|.. ++|+.+|++|++
T Consensus 381 ~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 381 QLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHH
Confidence 655 566666666643
No 219
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.45 E-value=0.0011 Score=61.23 Aligned_cols=80 Identities=11% Similarity=0.008 Sum_probs=67.0
Q ss_pred ccCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc-------CCH---HHHH
Q 019734 214 DFNLQEAARWYLRAAEG-------GY---VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC-------GHG---KAQL 273 (336)
Q Consensus 214 ~~~~~~A~~~~~~a~~~-------~~---~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~-------~~~---~a~~ 273 (336)
.+++++|+..|+++++. .+ ...+.+||.+|.. .+++++|+.++++++.. .++ ..++
T Consensus 300 ~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~----~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~ 375 (429)
T 3qwp_A 300 HWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN----LGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVM 375 (429)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh----hccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHH
Confidence 46899999999999864 12 5678999999965 33999999999999872 333 4569
Q ss_pred HHHHHhhccCCHHHHHHHHHHHHH
Q 019734 274 EHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 274 ~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
+||.+|..+|++++|..+|++|++
T Consensus 376 nLa~~~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 376 KVGKLQLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHH
Confidence 999999999999999999999986
No 220
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.39 E-value=0.061 Score=50.58 Aligned_cols=163 Identities=9% Similarity=-0.031 Sum_probs=99.4
Q ss_pred CChHHHHHHHHhcC-CChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhc-CC----CCcCCHHHHHHHHHHHHHcC-
Q 019734 63 SLPFDVLNKIAASF-TLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH-GR----GVRKNLDKALDSFLKGAARG- 135 (336)
Q Consensus 63 ~~~~~~l~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~-g~----g~~~~~~~A~~~~~~A~~~~- 135 (336)
..|..++...+..+ ..|++.+|..++....+..-. ++...+..|=.++.. |. ...+++++|...|+.....|
T Consensus 23 ~spe~~l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~-pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~ 101 (501)
T 4g26_A 23 QSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQ-LSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKV 101 (501)
T ss_dssp -CHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTCC-CCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCC-CCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCC
Confidence 34544454444444 668888887777776665433 345554433333333 11 11334778888888777664
Q ss_pred --CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHH----HHHHHHHHHHHHcC---CHHHHHHH
Q 019734 136 --STLAMVDAGLMYWEMDKKEAAISLYRQAAVLG---DPAGQFNLGISYLQ----EEAVKLLYQASIAG---HVRAQYQL 203 (336)
Q Consensus 136 --~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~~~~----~~A~~~~~ka~~~~---~~~a~~~l 203 (336)
+...+..|-..|...|+.++|..+|.+..+.| +...+..|=..|.. ++|...|+...+.| +...+..|
T Consensus 102 ~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~L 181 (501)
T 4g26_A 102 VPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAAL 181 (501)
T ss_dssp CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 66777777777878888888888888777664 45555555455544 67777777666654 44555555
Q ss_pred HHHHhcCCCCccCHHHHHHHHHHHHHC
Q 019734 204 ALCLHRGRGVDFNLQEAARWYLRAAEG 230 (336)
Q Consensus 204 g~~~~~g~g~~~~~~~A~~~~~~a~~~ 230 (336)
-..|.. .++.++|..+|++.-+.
T Consensus 182 i~~~~~----~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 182 LKVSMD----TKNADKVYKTLQRLRDL 204 (501)
T ss_dssp HHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHhh----CCCHHHHHHHHHHHHHh
Confidence 555555 56677777776665443
No 221
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.29 E-value=0.0022 Score=50.34 Aligned_cols=108 Identities=12% Similarity=0.095 Sum_probs=79.1
Q ss_pred HHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCC-------HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC-----
Q 019734 68 VLNKIAASFTLPQLRAASLVCKSWNDALRPLRE-------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG----- 135 (336)
Q Consensus 68 ~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-------~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~----- 135 (336)
++.++..++..+.|+.|+.++..++....+.++ ..+++.+|..++. ++++.+|..+|++|+...
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~----~~eyrrA~~~y~qALq~~k~l~k 98 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH----DKEYRNAVSKYTMALQQKKALSK 98 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc----ccHHHHHHHHHHHHHHHHHHHhc
Confidence 567777788999999999888887776644333 3477888999998 699999999999997541
Q ss_pred C----------------------HHHHHHHHHHHhcCCCHHHHHHHHHHH-HHcCCHHHHHHHHHHH
Q 019734 136 S----------------------TLAMVDAGLMYWEMDKKEAAISLYRQA-AVLGDPAGQFNLGISY 179 (336)
Q Consensus 136 ~----------------------~~a~~~lg~~~~~~~~~~~A~~~~~~a-~~~~~~~a~~~Lg~~~ 179 (336)
+ .+..|.++.||...+++++|+..++.. .....+.....||.+|
T Consensus 99 ~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 99 TSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQRTPKINMLLANLY 165 (167)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGGGCCHHHHHHHHHHC
T ss_pred CCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCchhcCHHHHHHHHHHh
Confidence 1 145677777777777777777776664 3446666666666655
No 222
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.14 E-value=0.0085 Score=44.89 Aligned_cols=98 Identities=11% Similarity=0.121 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCH----HHHHHHHHHhhccCCHHHHH
Q 019734 216 NLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG----KAQLEHGLGLFTEGEMMKAV 289 (336)
Q Consensus 216 ~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~----~a~~~lg~~~~~~~~~~~A~ 289 (336)
........|.+... .....+.+++|+++.+.. .+.+..+++..++..+..+.+ +..|.||..+++.|+|++|.
T Consensus 16 ~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~-~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTR-YNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSS-SHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 34556667777665 356899999999997643 366778899999998877643 55699999999999999999
Q ss_pred HHHHHHHHc--CcHHHHHHHHHHHhhc
Q 019734 290 VYLELATRA--GETAADHVKNVILQQL 314 (336)
Q Consensus 290 ~~~~~A~~~--~~~~a~~~~~~~~~~~ 314 (336)
.+.+..++. ++..|......+...+
T Consensus 95 ~~~~~lL~~eP~n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 95 KYVRGLLQTEPQNNQAKELERLIDKAM 121 (126)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999999986 4578887777766544
No 223
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.88 E-value=0.044 Score=51.41 Aligned_cols=167 Identities=8% Similarity=-0.098 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHHHHH---H-
Q 019734 121 LDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL-GDPAGQFNLGISYLQEEAVKLLYQAS---I- 193 (336)
Q Consensus 121 ~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-~~~~a~~~Lg~~~~~~~A~~~~~ka~---~- 193 (336)
.+.....|++|+.. ..+..|+..+..+...|+.++|...|.+|+.. .+...++..+.....++...-+..+. +
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~ 274 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEMSDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEA 274 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHTTCTHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCcHHHHHHHHhhcchhHHHHHHHHHHHhhcc
Confidence 45677899999985 57899999999999999999999999999876 22222222222110011111111110 0
Q ss_pred --------cCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHH
Q 019734 194 --------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG--YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 263 (336)
Q Consensus 194 --------~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a 263 (336)
......+...+.+... .++.+.|...|.+| ... ....+...+.+-.. ..++.+.|...|+++
T Consensus 275 ~~~~~~~~~~~~~lw~~y~~~~~r----~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~---~~~d~~~ar~ife~a 346 (493)
T 2uy1_A 275 ESAEKVFSKELDLLRINHLNYVLK----KRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYY---ATGSRATPYNIFSSG 346 (493)
T ss_dssp ------CHHHHHHHHHHHHHHHHH----HHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHH---HHCCSHHHHHHHHHH
T ss_pred chhhhhcccccHHHHHHHHHHHHH----cCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHH---HCCChHHHHHHHHHH
Confidence 0122456666776665 56799999999999 322 33444433433322 122789999999999
Q ss_pred HHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHH
Q 019734 264 ADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELA 295 (336)
Q Consensus 264 ~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A 295 (336)
+.. +.+..+...+......|+.+.|...|+++
T Consensus 347 l~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 347 LLKHPDSTLLKEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 984 44555555566667789999999999997
No 224
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.88 E-value=0.091 Score=49.27 Aligned_cols=155 Identities=7% Similarity=-0.096 Sum_probs=92.4
Q ss_pred HHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc-----CCHHHH
Q 019734 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR-----GSTLAM 140 (336)
Q Consensus 66 ~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~-----~~~~a~ 140 (336)
..+...+...|..++++.+..++.+++... ++.+.|......-.. .+ ...+.....|+.|+.. .+...|
T Consensus 15 R~vyer~l~~~P~~~~e~~~~iferal~~~---ps~~LW~~Y~~f~~~-~~--~~~~~i~~~fe~al~~vg~d~~s~~iW 88 (493)
T 2uy1_A 15 SAIMEHARRLYMSKDYRSLESLFGRCLKKS---YNLDLWMLYIEYVRK-VS--QKKFKLYEVYEFTLGQFENYWDSYGLY 88 (493)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHSTTC---CCHHHHHHHHHHHHH-HC------CTHHHHHHHHHHSTTCTTCHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHhccC---CCHHHHHHHHHHHHH-hC--chHHHHHHHHHHHHHHcCCCcccHHHH
Confidence 456777777777788888888888888753 366655544433322 11 1234556677887763 255666
Q ss_pred HHHHHHHhc----CCCHHHHHHHHHHHHHcC--CHHHHHH----------------------------------------
Q 019734 141 VDAGLMYWE----MDKKEAAISLYRQAAVLG--DPAGQFN---------------------------------------- 174 (336)
Q Consensus 141 ~~lg~~~~~----~~~~~~A~~~~~~a~~~~--~~~a~~~---------------------------------------- 174 (336)
......+.. .++.+.+...|++|+... +.+-++.
T Consensus 89 ~~Yi~f~~~~~~~~~~~~~vR~iy~rAL~~P~~~~~~lw~~Y~~fE~~~~~~~~~~~~~~~~~~y~~ar~~y~~~~~~~~ 168 (493)
T 2uy1_A 89 KEYIEEEGKIEDEQTRIEKIRNGYMRALQTPMGSLSELWKDFENFELELNKITGKKIVGDTLPIFQSSFQRYQQIQPLIR 168 (493)
T ss_dssp HHHHHHTSSCSSHHHHHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhchhhhHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHhccccHHHHHHHHhHHHHHHHHHHHHHHHHHh
Confidence 666666543 256777888888887531 1111000
Q ss_pred -----HHHHHHH-H--------------HHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC
Q 019734 175 -----LGISYLQ-E--------------EAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 230 (336)
Q Consensus 175 -----Lg~~~~~-~--------------~A~~~~~ka~~~--~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~ 230 (336)
+=.-|.. + .....|++++.. ..+..++..+..+.. .++.++|...|++|+..
T Consensus 169 ~~s~~~W~~y~~~E~~~~~~~~~~~~~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~----~~~~~~ar~i~erAi~~ 242 (493)
T 2uy1_A 169 GWSVKNAARLIDLEMENGMKLGGRPHESRMHFIHNYILDSFYYAEEVYFFYSEYLIG----IGQKEKAKKVVERGIEM 242 (493)
T ss_dssp TCSHHHHHHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHhcCCccCcchhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhC
Confidence 0000111 1 234577777663 567788888887776 67888888888888544
No 225
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.45 E-value=0.058 Score=40.33 Aligned_cols=76 Identities=8% Similarity=0.009 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCH----HHHHHHHHHHhcCCCHHHHHHHHHHHHH--cCCHHHH
Q 019734 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST----LAMVDAGLMYWEMDKKEAAISLYRQAAV--LGDPAGQ 172 (336)
Q Consensus 99 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~----~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~ 172 (336)
...++.|.+|.++.+ .....+..+++..++..+..+++ +.+|.||..+++.|++++|+.++...++ +++..|.
T Consensus 33 ~s~~~~F~yAw~Lv~-S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~ 111 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVR-TRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAK 111 (126)
T ss_dssp CCHHHHHHHHHHHTT-SSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 588999999999988 34455677799999998877644 6889999999999999999999999875 4788876
Q ss_pred HHH
Q 019734 173 FNL 175 (336)
Q Consensus 173 ~~L 175 (336)
...
T Consensus 112 ~Lk 114 (126)
T 1nzn_A 112 ELE 114 (126)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 226
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.16 E-value=0.038 Score=41.60 Aligned_cols=84 Identities=11% Similarity=0.109 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCC---HHHHHHHHHHhhccCCHHHHHHHHHHHHHc--CcHHHHH
Q 019734 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH---GKAQLEHGLGLFTEGEMMKAVVYLELATRA--GETAADH 305 (336)
Q Consensus 231 ~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~---~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~--~~~~a~~ 305 (336)
-.+.+.+++++++.+.. ...+..+++..++.....+. -+..|.|+..+++.|+|++|..+.+..++. ++..|..
T Consensus 38 vs~qt~F~yAw~Lv~S~-~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~ 116 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKST-DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 116 (134)
T ss_dssp SCHHHHHHHHHHHHHSS-CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred CChhhHHHHHHHHHcCC-CHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHH
Confidence 46889999999997764 35688899999999887543 566799999999999999999999999876 5778888
Q ss_pred HHHHHHhhcC
Q 019734 306 VKNVILQQLS 315 (336)
Q Consensus 306 ~~~~~~~~~~ 315 (336)
....+...+.
T Consensus 117 Lk~~Ie~ki~ 126 (134)
T 3o48_A 117 LKSMVEDKIQ 126 (134)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777766554
No 227
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=95.70 E-value=0.41 Score=48.10 Aligned_cols=194 Identities=12% Similarity=0.123 Sum_probs=123.8
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHH---cCC----HHHHHHHHHHHhcCCCHHHHHHHHH
Q 019734 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAA---RGS----TLAMVDAGLMYWEMDKKEAAISLYR 161 (336)
Q Consensus 89 ~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~---~~~----~~a~~~lg~~~~~~~~~~~A~~~~~ 161 (336)
..|+-+..+.+...+...||.++. ++.++++..+.+-+. .++ ..|++.+|.++...++ +++.++.
T Consensus 364 ~~Wl~k~~~~~k~sA~aSLGlIh~------g~~~~gl~~L~~yL~~~~s~~~~ik~GAllaLGli~ag~~~--~~~~lL~ 435 (963)
T 4ady_A 364 LPWLGKAQNWAKFTATASLGVIHK------GNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFGR--DTTDYLK 435 (963)
T ss_dssp HHHHHHCCTHHHHHHHHHHHHHTS------SCTTTHHHHHTTTSTTSCCSCHHHHHHHHHHHHHHTTTTTH--HHHHHHH
T ss_pred hhhhhccchHHHHHHHHHhhhhcc------CchHHHHHHHHHhccccCCCcHHHHHHHHHHHHHhcCCCcH--HHHHHHH
Confidence 357777665556678888898874 466677888877665 222 4577888888866664 6788887
Q ss_pred HHHHcCC--------H----HHHHHHHHHHHH---HHHHHHHHHHHHcCCH----HHHHHHHHHHhcCCCCccCHHHHHH
Q 019734 162 QAAVLGD--------P----AGQFNLGISYLQ---EEAVKLLYQASIAGHV----RAQYQLALCLHRGRGVDFNLQEAAR 222 (336)
Q Consensus 162 ~a~~~~~--------~----~a~~~Lg~~~~~---~~A~~~~~ka~~~~~~----~a~~~lg~~~~~g~g~~~~~~~A~~ 222 (336)
..+...+ . .|...||.++.. ++++..+...+..++. .|.+-||.++.- .++.+....
T Consensus 436 ~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~GS~~eev~e~L~~~L~dd~~~~~~~AalALGli~vG----Tgn~~ai~~ 511 (963)
T 4ady_A 436 NIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYEALKEVLYNDSATSGEAAALGMGLCMLG----TGKPEAIHD 511 (963)
T ss_dssp HHHHHHSSCCSCHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTT----CCCHHHHHH
T ss_pred HHHcCccccccccccHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcc----cCCHHHHHH
Confidence 7775433 2 467788888877 7888888888876543 356677877763 566666566
Q ss_pred HHHHHHHCCCHH----HHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHH----HHHHHHHhhccCCHHHHHHHHHH
Q 019734 223 WYLRAAEGGYVR----AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA----QLEHGLGLFTEGEMMKAVVYLEL 294 (336)
Q Consensus 223 ~~~~a~~~~~~~----a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a----~~~lg~~~~~~~~~~~A~~~~~~ 294 (336)
.+..+.+..+.. +...||.++. | +.+.+-...+......++.. .+.+|..|...|+...-...++.
T Consensus 512 LL~~~~e~~~e~vrR~aalgLGll~~---g---~~e~~~~li~~L~~~~dp~vRygaa~alglAyaGTGn~~aIq~LL~~ 585 (963)
T 4ady_A 512 MFTYSQETQHGNITRGLAVGLALINY---G---RQELADDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLLHV 585 (963)
T ss_dssp HHHHHHHCSCHHHHHHHHHHHHHHTT---T---CGGGGHHHHHHHHHCSCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHH
T ss_pred HHHHHhccCcHHHHHHHHHHHHhhhC---C---ChHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 666665544433 3344555542 2 44444444444444444433 35677788888887665557777
Q ss_pred HHHcCc
Q 019734 295 ATRAGE 300 (336)
Q Consensus 295 A~~~~~ 300 (336)
+....+
T Consensus 586 ~~~d~~ 591 (963)
T 4ady_A 586 AVSDSN 591 (963)
T ss_dssp HHHCSC
T ss_pred hccCCc
Confidence 765443
No 228
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.68 E-value=0.13 Score=39.20 Aligned_cols=84 Identities=11% Similarity=0.105 Sum_probs=68.1
Q ss_pred CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC---CHHHHHHHHHHhhccCCHHHHHHHHHHHHHc--CcHHHH
Q 019734 230 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG---HGKAQLEHGLGLFTEGEMMKAVVYLELATRA--GETAAD 304 (336)
Q Consensus 230 ~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~--~~~~a~ 304 (336)
.-...+.+++++++.+.. ...+..+++..++.....+ .-+..|.|+..+++.|+|++|..+.+..++. ++..|.
T Consensus 36 ~vs~~t~F~YAw~Lv~S~-~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~ 114 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKST-DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 114 (144)
T ss_dssp TSCHHHHHHHHHHHHHSS-SHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHH
T ss_pred CCcHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHH
Confidence 357889999999997654 3668889999999988753 3566799999999999999999999999986 567787
Q ss_pred HHHHHHHhhc
Q 019734 305 HVKNVILQQL 314 (336)
Q Consensus 305 ~~~~~~~~~~ 314 (336)
.....+...+
T Consensus 115 ~Lk~~Ie~~i 124 (144)
T 1y8m_A 115 ALKSMVEDKI 124 (144)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777766554
No 229
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.62 E-value=0.077 Score=41.59 Aligned_cols=115 Identities=11% Similarity=-0.052 Sum_probs=76.6
Q ss_pred CCHHHHHHHHHHHHHc--CCH---------HHHHHHHHHHhcCCCHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHH
Q 019734 119 KNLDKALDSFLKGAAR--GST---------LAMVDAGLMYWEMDKKEAAISLYRQAAVL-----GDPAGQFNLGISYLQE 182 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~--~~~---------~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-----~~~~a~~~Lg~~~~~~ 182 (336)
+.++.|+.....++.. .++ ++++.+|..++..+++.+|...|++|++. ..+.+...++. ..
T Consensus 34 ~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~-~s-- 110 (167)
T 3ffl_A 34 GLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGN-SA-- 110 (167)
T ss_dssp TCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----------------
T ss_pred hhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccc-cC--
Confidence 6888888888886643 222 47889999999999999999999999854 12221111110 00
Q ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHH-HHCCCHHHHHHHHHHHH
Q 019734 183 EAVKLLYQASI-AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA-AEGGYVRAMYNTSLCYS 244 (336)
Q Consensus 183 ~A~~~~~ka~~-~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a-~~~~~~~a~~~lg~~~~ 244 (336)
-+....+ ..+.+.-|.++.||.. .+++.+|+..++.. .....+..-..||.+|.
T Consensus 111 ----s~p~s~~~~~e~Elkykia~C~~~----l~~~~~Ai~~Le~Ip~k~Rt~kvnm~LakLy~ 166 (167)
T 3ffl_A 111 ----STPQSQCLPSEIEVKYKLAECYTV----LKQDKDAIAILDGIPSRQRTPKINMLLANLYK 166 (167)
T ss_dssp ----------CCCCHHHHHHHHHHHHHH----TTCHHHHHHHHHTSCGGGCCHHHHHHHHHHCC
T ss_pred ----CCcccccccchHHHHHHHHHHHHH----HCCHHHHHHHHhcCCchhcCHHHHHHHHHHhc
Confidence 0000001 1245778999999998 89999999999876 55678888888888773
No 230
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=94.68 E-value=0.09 Score=40.48 Aligned_cols=101 Identities=16% Similarity=0.119 Sum_probs=67.2
Q ss_pred HHHcCCHHHHHHHHHHHhcCCCCccCH------HHHHHHHHHHHHCC----------CHHHHHHHHHHHHcCCCCcccHH
Q 019734 191 ASIAGHVRAQYQLALCLHRGRGVDFNL------QEAARWYLRAAEGG----------YVRAMYNTSLCYSFGEGLPLSHR 254 (336)
Q Consensus 191 a~~~~~~~a~~~lg~~~~~g~g~~~~~------~~A~~~~~~a~~~~----------~~~a~~~lg~~~~~~~g~~~~~~ 254 (336)
.+...+++.+.......+. .+|. ++-+..|++|+..- +..-+...+... . -+|.+
T Consensus 7 ~~~p~~yd~W~~yl~llE~----~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~-e----i~D~d 77 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEK----NSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK-A----IQEPD 77 (161)
T ss_dssp ---CCSHHHHHHHHHHHHH----HTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHH-H----HHCGG
T ss_pred eeCCCCHHHHHHHHHHHHH----cCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHH-H----hcCHH
Confidence 4556788888888877775 3555 67778888886532 123334444332 1 25999
Q ss_pred HHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCc
Q 019734 255 QARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGE 300 (336)
Q Consensus 255 ~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~ 300 (336)
+|.+.|+.++.. ..+..+...+..-.++|+..+|.+.+.+|+..+.
T Consensus 78 ~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~ 125 (161)
T 4h7y_A 78 DARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGA 125 (161)
T ss_dssp GCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCC
Confidence 999999999875 3333334444444559999999999999999876
No 231
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.57 E-value=2.4 Score=41.59 Aligned_cols=128 Identities=16% Similarity=0.093 Sum_probs=67.7
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCccCHHH
Q 019734 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ-EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 219 (336)
Q Consensus 141 ~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~-~~A~~~~~ka~~~~~~~a~~~lg~~~~~g~g~~~~~~~ 219 (336)
..+...+...|..++|+...+ ++..-+.++...-. ++|.+. +-...+...|..||..+.. .++++.
T Consensus 633 ~~~~~~l~~~~~~~~a~~~~~------~~~~~f~~~l~~~~~~~A~~~---~~~~~~~~~W~~la~~al~----~~~~~~ 699 (814)
T 3mkq_A 633 TKIARFLEGQEYYEEALNISP------DQDQKFELALKVGQLTLARDL---LTDESAEMKWRALGDASLQ----RFNFKL 699 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHCC------CHHHHHHHHHHHTCHHHHHHH---HTTCCCHHHHHHHHHHHHH----TTCHHH
T ss_pred HHHHHHHHhCCChHHheecCC------CcchheehhhhcCCHHHHHHH---HHhhCcHhHHHHHHHHHHH----cCCHHH
Confidence 445555566677777665442 23333333322211 444433 2234677788888888887 788888
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHH
Q 019734 220 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLEL 294 (336)
Q Consensus 220 A~~~~~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~ 294 (336)
|+.+|.++ ++......| |.. .| +.++.....+.+...+.....+. +|...|++++|++.|.+
T Consensus 700 A~~~y~~~---~d~~~l~~l---~~~-~~---~~~~~~~~~~~a~~~~~~~~A~~---~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 700 AIEAFTNA---HDLESLFLL---HSS-FN---NKEGLVTLAKDAETTGKFNLAFN---AYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHH---TCHHHHHHH---HHH-TT---CHHHHHHHHHHHHHTTCHHHHHH---HHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHc---cChhhhHHH---HHH-cC---CHHHHHHHHHHHHHcCchHHHHH---HHHHcCCHHHHHHHHHH
Confidence 88888875 333332222 221 11 55555555555555555333222 24445666666666544
No 232
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=94.45 E-value=0.85 Score=34.68 Aligned_cols=76 Identities=1% Similarity=-0.143 Sum_probs=62.3
Q ss_pred CCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHH
Q 019734 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG---STLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQ 172 (336)
Q Consensus 98 ~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~---~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~ 172 (336)
....++.|.++.++.. .....|..+++..++.....+ .-+.+|.|+.-+++.|++++|+.+....++. +|.+|.
T Consensus 36 ~vs~~t~F~YAw~Lv~-S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~ 114 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIK-STDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 114 (144)
T ss_dssp TSCHHHHHHHHHHHHH-SSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHH
T ss_pred CCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHH
Confidence 4578899999888887 334567889999999988753 4578999999999999999999999998854 787776
Q ss_pred HH
Q 019734 173 FN 174 (336)
Q Consensus 173 ~~ 174 (336)
..
T Consensus 115 ~L 116 (144)
T 1y8m_A 115 AL 116 (144)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 233
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=93.97 E-value=0.75 Score=34.52 Aligned_cols=78 Identities=1% Similarity=-0.144 Sum_probs=62.5
Q ss_pred CCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHH
Q 019734 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG---STLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQ 172 (336)
Q Consensus 98 ~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~---~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~ 172 (336)
...+.+.|.++.++.+. ....|..+++..++.....+ .-+.+|.|+.-+++.|++++|+.+....++. ++..|.
T Consensus 37 ~vs~qt~F~yAw~Lv~S-~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 37 TATIQSRFNYAWGLIKS-TDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 115 (134)
T ss_dssp GSCHHHHHHHHHHHHHS-SCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred CCChhhHHHHHHHHHcC-CCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHH
Confidence 34788888888888773 33567889999999888754 3678999999999999999999999999854 788776
Q ss_pred HHHH
Q 019734 173 FNLG 176 (336)
Q Consensus 173 ~~Lg 176 (336)
....
T Consensus 116 ~Lk~ 119 (134)
T 3o48_A 116 ALKS 119 (134)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5433
No 234
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.32 E-value=0.42 Score=44.69 Aligned_cols=75 Identities=13% Similarity=0.115 Sum_probs=59.1
Q ss_pred HHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHH
Q 019734 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGIS 178 (336)
Q Consensus 103 a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~ 178 (336)
.+..||.+...+ .....|..||.+|+.. ++...+++||.+....++.-+|+.+|.+++-. ..+.|..+|..+
T Consensus 154 ~l~~LGDL~RY~----~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~ 229 (497)
T 1ya0_A 154 CLVHLGDIARYR----NQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHT----TCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHcccHHHHH----HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHH
Confidence 455678887774 5678899999998886 57788889999998888888899998888744 567788888777
Q ss_pred HHH
Q 019734 179 YLQ 181 (336)
Q Consensus 179 ~~~ 181 (336)
+..
T Consensus 230 f~~ 232 (497)
T 1ya0_A 230 LSK 232 (497)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 235
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=91.83 E-value=7 Score=35.19 Aligned_cols=91 Identities=19% Similarity=0.059 Sum_probs=66.5
Q ss_pred HHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc----
Q 019734 199 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----GY----VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---- 266 (336)
Q Consensus 199 a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~---- 266 (336)
....||.+|.. .+++.+|...+.+..+. ++ .+.+..-..+|.. .+|+.++...|.+|...
T Consensus 101 l~~kL~~l~~~----~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~----~~n~~k~k~~l~~a~~~~~ai 172 (394)
T 3txn_A 101 LEARLIALYFD----TALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHA----LSNLPKARAALTSARTTANAI 172 (394)
T ss_dssp HHHHHHHHHHH----TTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH----hhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH----hccHHHHHHHHHHHHhhhccC
Confidence 34578999988 89999999999887542 22 2334455555654 33999999999998642
Q ss_pred -CCHHHH----HHHHHHhh-ccCCHHHHHHHHHHHHH
Q 019734 267 -GHGKAQ----LEHGLGLF-TEGEMMKAVVYLELATR 297 (336)
Q Consensus 267 -~~~~a~----~~lg~~~~-~~~~~~~A~~~~~~A~~ 297 (336)
.+|..+ ..-|.++. ..++|.+|...|-.+.+
T Consensus 173 ~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 173 YCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 334333 56688888 89999999999999975
No 236
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=91.63 E-value=1 Score=42.09 Aligned_cols=71 Identities=14% Similarity=0.021 Sum_probs=32.5
Q ss_pred HHHHHHHhcCCCCccCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHH--cCCHHHHHHHH
Q 019734 201 YQLALCLHRGRGVDFNLQEAARWYLRAAE--GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD--CGHGKAQLEHG 276 (336)
Q Consensus 201 ~~lg~~~~~g~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~--~~~~~a~~~lg 276 (336)
..||++... ...+..|..||.+|+. ++.+..++.||.+.... .+.-+|+.+|.+++. .-.+.+..||.
T Consensus 156 ~~LGDL~RY----~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~----~~~l~a~y~y~rsl~~~~Pf~~a~~nL~ 227 (497)
T 1ya0_A 156 VHLGDIARY----RNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSK----GDHLTTIFYYCRSIAVKFPFPAASTNLQ 227 (497)
T ss_dssp HHHHHHHHH----TTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHT----TCHHHHHHHHHHHHSSSBCCHHHHHHHH
T ss_pred HHcccHHHH----HHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcc----cccHHHHHHHHHHHhcCCCChhHHHHHH
Confidence 344444444 3344555555555532 34455555555555321 144455555555543 23344444554
Q ss_pred HHh
Q 019734 277 LGL 279 (336)
Q Consensus 277 ~~~ 279 (336)
.++
T Consensus 228 ~~f 230 (497)
T 1ya0_A 228 KAL 230 (497)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 237
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.88 E-value=9 Score=37.37 Aligned_cols=27 Identities=11% Similarity=0.030 Sum_probs=12.7
Q ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 019734 136 STLAMVDAGLMYWEMDKKEAAISLYRQ 162 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~~~~A~~~~~~ 162 (336)
++..|..||..+...++++.|+.+|.+
T Consensus 680 ~~~~W~~la~~al~~~~~~~A~~~y~~ 706 (814)
T 3mkq_A 680 AEMKWRALGDASLQRFNFKLAIEAFTN 706 (814)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cHhHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 444444444444444444444444443
No 238
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=89.09 E-value=11 Score=32.80 Aligned_cols=127 Identities=15% Similarity=0.105 Sum_probs=70.9
Q ss_pred HHHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHH----cCCHHHHH
Q 019734 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAA----RGSTLAMV 141 (336)
Q Consensus 66 ~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~----~~~~~a~~ 141 (336)
...+.+....+..|++=+|...++....+ |.. .+++++|++.+...+. .+...+-.
T Consensus 14 ~r~l~rl~~~I~~G~yYEAhQ~~Rtl~~R----------------y~~----~~~~~eAidlL~~ga~~ll~~~Q~~sa~ 73 (312)
T 2wpv_A 14 AKTLQRFENKIKAGDYYEAHQTLRTIANR----------------YVR----SKSYEHAIELISQGALSFLKAKQGGSGT 73 (312)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------HHH----TTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhhccChHHHHHHHHHHHHH----------------HHH----hcCHHHHHHHHHHHHHHHHHCCCcchHH
Confidence 35566666777778888887665555444 222 3677788877766543 24444444
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------HHHHHHHHHHH--HcCCHHHHHHHHHHH
Q 019734 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ------------EEAVKLLYQAS--IAGHVRAQYQLALCL 207 (336)
Q Consensus 142 ~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~------------~~A~~~~~ka~--~~~~~~a~~~lg~~~ 207 (336)
.|+..+.. .|.++-..-+.+..-.|..++.. .+|+.|-.+.- ..|+++-+..+|..|
T Consensus 74 DLa~llve---------v~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~ 144 (312)
T 2wpv_A 74 DLIFYLLE---------VYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKL 144 (312)
T ss_dssp HHHHHHHH---------HHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHH---------HHHHcCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHH
Confidence 44443321 11111111112222222222211 56666666552 347888888888888
Q ss_pred hcCCCCccCHHHHHHHHH
Q 019734 208 HRGRGVDFNLQEAARWYL 225 (336)
Q Consensus 208 ~~g~g~~~~~~~A~~~~~ 225 (336)
.. .+++.+|..+|-
T Consensus 145 ~~----e~~~~~A~~H~i 158 (312)
T 2wpv_A 145 LE----GDFVYEAERYFM 158 (312)
T ss_dssp HH----TTCHHHHHHHHH
T ss_pred hh----cCCHHHHHHHHH
Confidence 87 678888887775
No 239
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=88.25 E-value=8.2 Score=30.45 Aligned_cols=54 Identities=17% Similarity=0.117 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a 163 (336)
+++.-|.|++- -+|++.|.+..+. .++..-|..||......|+++-|..+|+++
T Consensus 7 D~~~rF~LAL~-------lg~l~~A~e~a~~---l~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 7 DPHIRFDLALE-------YGNLDAALDEAKK---LNDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp CHHHHHHHHHH-------TTCHHHHHHHHHH---HCCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred ChHHHHHHHHh-------cCCHHHHHHHHHH---hCCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 45555555543 2577777766443 367777788888888888888887777765
No 240
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=86.21 E-value=5.9 Score=29.98 Aligned_cols=140 Identities=10% Similarity=-0.002 Sum_probs=80.1
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHHHHHHHHHcCCH----HHHHHHHHHHhcCCCCccCHHHHHHHH
Q 019734 150 MDKKEAAISLYRQAAVLGDPAGQFN-LGISYLQEEAVKLLYQASIAGHV----RAQYQLALCLHRGRGVDFNLQEAARWY 224 (336)
Q Consensus 150 ~~~~~~A~~~~~~a~~~~~~~a~~~-Lg~~~~~~~A~~~~~ka~~~~~~----~a~~~lg~~~~~g~g~~~~~~~A~~~~ 224 (336)
.|..++.++...+-+...+..-.++ +-++.. .-+. ..+-.+|.++.- .+-++...-+.+|
T Consensus 20 dG~v~qGveii~k~~~ssni~E~NW~ICNiiD-------------~a~C~y~v~vLd~IGkiFDi--s~C~NlKrVi~C~ 84 (172)
T 1wy6_A 20 DGYIDEGVKIVLEITKSSTKSEYNWFICNLLE-------------SIDCRYMFQVLDKIGSYFDL--DKCQNLKSVVECG 84 (172)
T ss_dssp TTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHH-------------HCCHHHHHHHHHHHGGGSCG--GGCSCTHHHHHHH
T ss_pred hhhHHHHHHHHHHHcCCCCccccceeeeecch-------------hhchhHHHHHHHHHhhhcCc--HhhhcHHHHHHHH
Confidence 4677777777777766654433221 222211 1111 122233444321 2346666666666
Q ss_pred HHHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC--CHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcHH
Q 019734 225 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG--HGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETA 302 (336)
Q Consensus 225 ~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~~ 302 (336)
-+. +-..-++.++.-+....| ..++=.+.+...+... .+...+.++.+|.+.|+..+|...+.+|++.|-.+
T Consensus 85 ~~~---n~~se~vd~ALd~lv~~~---KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~kE 158 (172)
T 1wy6_A 85 VIN---NTLNEHVNKALDILVIQG---KRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKGEKE 158 (172)
T ss_dssp HHT---TCCCHHHHHHHHHHHHTT---CHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHh---cchHHHHHHHHHHHHHhc---cHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhhHH
Confidence 553 222223444444443333 3444444444433333 37888999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 019734 303 ADHVKNVI 310 (336)
Q Consensus 303 a~~~~~~~ 310 (336)
|+.....+
T Consensus 159 AC~~in~~ 166 (172)
T 1wy6_A 159 ACNAVNTL 166 (172)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhh
Confidence 99876543
No 241
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=85.07 E-value=9.7 Score=29.26 Aligned_cols=33 Identities=15% Similarity=-0.005 Sum_probs=19.8
Q ss_pred cCCHHHHHHHHHHHhcCCCH------HHHHHHHHHHHHc
Q 019734 134 RGSTLAMVDAGLMYWEMDKK------EAAISLYRQAAVL 166 (336)
Q Consensus 134 ~~~~~a~~~lg~~~~~~~~~------~~A~~~~~~a~~~ 166 (336)
-.+++.|..........|++ ++-+..|.+|+..
T Consensus 10 p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~ 48 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEA 48 (161)
T ss_dssp CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHc
Confidence 35666666666666655666 5666666666543
No 242
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=85.02 E-value=16 Score=31.96 Aligned_cols=39 Identities=10% Similarity=0.074 Sum_probs=26.1
Q ss_pred HHHHHHHHHHH--HcCCHHHHHHHHHHHhcCCCCccCHHHHHHHH
Q 019734 182 EEAVKLLYQAS--IAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 224 (336)
Q Consensus 182 ~~A~~~~~ka~--~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~ 224 (336)
.+|+.|=.+.- ..|+++-+..+|..|.. .+++.+|..+|
T Consensus 119 ~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~----e~~~~~Ae~H~ 159 (336)
T 3lpz_A 119 KEMIDWSKKFGDYPAGDPELHHVVGTLYVE----EGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHSSCTTCCHHHHHHHHHHHHH----TTCHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCCCHHHHHHHHHHHHc----cCCHHHHHHHH
Confidence 56666665532 34777777777877776 56777777766
No 243
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=84.76 E-value=4.4 Score=30.66 Aligned_cols=40 Identities=15% Similarity=0.127 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 019734 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNL 175 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~L 175 (336)
+++.++.+|..|...|+..+|-+++.+|.+.|..+|+.++
T Consensus 124 ~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~kEAC~~i 163 (172)
T 1wy6_A 124 SASILVAIANALRRVGDERDATTLLIEACKKGEKEACNAV 163 (172)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhhHHHHHHH
Confidence 4677777777777777777777777777777777776554
No 244
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=82.40 E-value=16 Score=28.71 Aligned_cols=83 Identities=11% Similarity=-0.108 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHH
Q 019734 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 274 (336)
Q Consensus 195 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~ 274 (336)
++..-|..||..-.. .+|++.|..+|+++ ++.....-|..+. +|.++-....+.|...|+....+.
T Consensus 32 ~~~~~Wk~Lg~~AL~----~gn~~lAe~cy~~~---~D~~~L~~Ly~~t-------g~~e~L~kla~iA~~~g~~n~af~ 97 (177)
T 3mkq_B 32 NDSITWERLIQEALA----QGNASLAEMIYQTQ---HSFDKLSFLYLVT-------GDVNKLSKMQNIAQTREDFGSMLL 97 (177)
T ss_dssp CCHHHHHHHHHHHHH----TTCHHHHHHHHHHT---TCHHHHHHHHHHH-------TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHH----cCChHHHHHHHHHh---CCHHHHHHHHHHh-------CCHHHHHHHHHHHHHCccHHHHHH
Confidence 444455555555444 56666666666653 3333322222221 155555555555555555433333
Q ss_pred HHHHhhccCCHHHHHHHHHH
Q 019734 275 HGLGLFTEGEMMKAVVYLEL 294 (336)
Q Consensus 275 lg~~~~~~~~~~~A~~~~~~ 294 (336)
. +...|++++++..|.+
T Consensus 98 ~---~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 98 N---TFYNNSTKERSSIFAE 114 (177)
T ss_dssp H---HHHHTCHHHHHHHHHH
T ss_pred H---HHHcCCHHHHHHHHHH
Confidence 2 3345666666666643
No 245
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=79.53 E-value=30 Score=29.93 Aligned_cols=133 Identities=16% Similarity=0.065 Sum_probs=82.5
Q ss_pred CHHHHHHHHHHHHHcCC-HHHH---HHHHHHHhcCCCHHHHHHHHHHHH----HcCCHHHHHHHHHHHHHHHHHHHHHHH
Q 019734 120 NLDKALDSFLKGAARGS-TLAM---VDAGLMYWEMDKKEAAISLYRQAA----VLGDPAGQFNLGISYLQEEAVKLLYQA 191 (336)
Q Consensus 120 ~~~~A~~~~~~A~~~~~-~~a~---~~lg~~~~~~~~~~~A~~~~~~a~----~~~~~~a~~~Lg~~~~~~~A~~~~~ka 191 (336)
..++-+.=++..++.|+ -+|+ .-+..-|...+++++|++.+...+ +.+....-..|+..+. +.|+++
T Consensus 12 ~~~r~l~rl~~~I~~G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llv-----ev~~~~ 86 (312)
T 2wpv_A 12 KLAKTLQRFENKIKAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLL-----EVYDLA 86 (312)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-----HHHHHT
T ss_pred HHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHH-----HHHHHc
Confidence 46677777777777764 3444 345556666799999999987765 3466666666666654 344443
Q ss_pred HHcCCHHHHHHHHHHHhc-CCCCc---cCHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHH
Q 019734 192 SIAGHVRAQYQLALCLHR-GRGVD---FNLQEAARWYLRAA--EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 261 (336)
Q Consensus 192 ~~~~~~~a~~~lg~~~~~-g~g~~---~~~~~A~~~~~~a~--~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~ 261 (336)
-..-+....-.|..++.. ....+ +=..+|+.|-.+.- ..|++.-+..+|..|.+. +++.+|..+|-
T Consensus 87 ~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e----~~~~~A~~H~i 158 (312)
T 2wpv_A 87 EVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEG----DFVYEAERYFM 158 (312)
T ss_dssp TCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHT----TCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhc----CCHHHHHHHHH
Confidence 222345566667777653 11111 12345555555542 347888888888888763 38888888775
No 246
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=78.46 E-value=41 Score=32.15 Aligned_cols=123 Identities=14% Similarity=-0.039 Sum_probs=72.3
Q ss_pred HHHHHhcCCChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc-CCHH-HHHHHHHH
Q 019734 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR-GSTL-AMVDAGLM 146 (336)
Q Consensus 69 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~-~~~~-a~~~lg~~ 146 (336)
+..+...+...+.+.|..++....+.. .......+...+.+-.. ....+...++..|+.+.... .+.. .....+..
T Consensus 218 ~~~~~~rlar~d~~~A~~~~~~~~~~~-~~~~~~~~~~~~~ia~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~A 295 (618)
T 1qsa_A 218 AAVAFASVARQDAENARLMIPSLAQAQ-QLNEDQIQELRDIVAWR-LMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMA 295 (618)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHT-SCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHhhhhcc-CCCHHHHHHHHHHHHHH-HHHcCCChHHHHHHHhccccCCChHHHHHHHHHH
Confidence 333444444556667766665555433 22233333333332222 22233366788888876554 3333 23334443
Q ss_pred HhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHHHHc
Q 019734 147 YWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQASIA 194 (336)
Q Consensus 147 ~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka~~~ 194 (336)
...+|.+.|..+|.+.... ..+.+.|.+|.++.. ++|..+|++++..
T Consensus 296 -lr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~~ 348 (618)
T 1qsa_A 296 -LGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQ 348 (618)
T ss_dssp -HHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred -HHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhcC
Confidence 4568999999999876543 467888999998877 7888888888764
No 247
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=78.02 E-value=30 Score=29.03 Aligned_cols=46 Identities=9% Similarity=0.122 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHH
Q 019734 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLG---DPAGQFNLGISYLQ 181 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~~~~ 181 (336)
+-+-+..++.+..+.+++++.+.+.++.++.+ ..+--+.|..+|..
T Consensus 30 ~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKN 78 (261)
T 3ubw_A 30 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKN 78 (261)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHh
Confidence 45666777888888888888888888888664 45566666666665
No 248
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=76.03 E-value=34 Score=28.70 Aligned_cols=45 Identities=16% Similarity=0.030 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHc-------CCHHH---HHHHHHHhhc-cCCHHHHHHHHHHHHH
Q 019734 253 HRQARKWMKRAADC-------GHGKA---QLEHGLGLFT-EGEMMKAVVYLELATR 297 (336)
Q Consensus 253 ~~~A~~~~~~a~~~-------~~~~a---~~~lg~~~~~-~~~~~~A~~~~~~A~~ 297 (336)
.+.|...|+.|.+. -+|-. ..|....|++ .+++++|+..-+.|+.
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 45778888888652 23322 2555565665 7999999999888875
No 249
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.27 E-value=8.5 Score=35.02 Aligned_cols=92 Identities=11% Similarity=0.019 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC----C-CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc----CC
Q 019734 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG----G-YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC----GH 268 (336)
Q Consensus 198 ~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~----~-~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~----~~ 268 (336)
.+...+|..|.. .||+++|.+.|.+..+. + -.+.+..+-.++.. .+|+..+..++.++... ++
T Consensus 132 ~~~~~la~~~~~----~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~----~~d~~~~~~~~~ka~~~~~~~~d 203 (429)
T 4b4t_R 132 QAWINLGEYYAQ----IGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF----YNDQLYVKEKLEAVNSMIEKGGD 203 (429)
T ss_dssp SCCHHHHHHHHH----HCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhhhcCCC
Confidence 456667777766 67777777777766432 1 23444444444432 23777777777777542 33
Q ss_pred HHHH----HHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 269 GKAQ----LEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 269 ~~a~----~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
+... ..-|.++...++|.+|...|-.+..
T Consensus 204 ~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~ 236 (429)
T 4b4t_R 204 WERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLA 236 (429)
T ss_dssp THHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhc
Confidence 3322 3446666677788888777777654
No 250
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=74.83 E-value=3.4 Score=28.12 Aligned_cols=32 Identities=19% Similarity=0.137 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 019734 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165 (336)
Q Consensus 121 ~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 165 (336)
.++|+.+..+|++. -..|++++|+.+|.++++
T Consensus 16 ~~~Ai~lv~~Ave~-------------D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 16 EEMARKYAINAVKA-------------DKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHHHH-------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------------HHhccHHHHHHHHHHHHH
Confidence 45667777666543 367888888888887764
No 251
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=73.97 E-value=3.7 Score=27.95 Aligned_cols=31 Identities=26% Similarity=0.202 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 019734 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165 (336)
Q Consensus 122 ~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 165 (336)
++|+.+.++|++. -..|++++|+.+|.++++
T Consensus 9 ~~Ai~lv~~Ave~-------------D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 9 DMARKYAILAVKA-------------DKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHHH-------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-------------HHhccHHHHHHHHHHHHH
Confidence 4666666666543 366888888888887764
No 252
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=73.28 E-value=45 Score=34.13 Aligned_cols=119 Identities=12% Similarity=-0.025 Sum_probs=83.3
Q ss_pred HHHHHHHHhcCCCCccCHHHHHHHHHHHHH------CCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC---CHH
Q 019734 200 QYQLALCLHRGRGVDFNLQEAARWYLRAAE------GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG---HGK 270 (336)
Q Consensus 200 ~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~------~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~---~~~ 270 (336)
+..|=..|-. .++.++|...|....+ .-+...+..|-..|.+ .++.++|...|++..+.| +..
T Consensus 130 ynaLIdglcK----~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck----~G~~~eA~~Lf~eM~~~G~~PDvv 201 (1134)
T 3spa_A 130 LLAFFKCCLL----TDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWAR----QGAFKELVYVLFMVKDAGLTPDLL 201 (1134)
T ss_dssp HHHHHHHHHH----HTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHHh----CCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHh----CCCHHHHHHHHHHHHHcCCCCcHH
Confidence 3344444444 6889999999976432 2377778777777755 338999999999998865 456
Q ss_pred HHHHHHHHhhccCC-HHHHHHHHHHHHHcC-cHHHHHHHHHHHhhcChhcHHHHHHHHHHhh
Q 019734 271 AQLEHGLGLFTEGE-MMKAVVYLELATRAG-ETAADHVKNVILQQLSATSRDRAMLVVDSWR 330 (336)
Q Consensus 271 a~~~lg~~~~~~~~-~~~A~~~~~~A~~~~-~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~ 330 (336)
.+..|-.++.+.|+ .++|..+|++..+.| .++...+-. .+...+++.....+++..
T Consensus 202 TYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY~~----ll~~~eR~~vL~~Vrkv~ 259 (1134)
T 3spa_A 202 SYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAV----LLSEEDRATVLKAVHKVK 259 (1134)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHHHHHS----CCCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCChhhccc----ccChhhHHHHHHHHHHhC
Confidence 66777777777786 578999999999877 344433322 246777877777776664
No 253
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=72.34 E-value=40 Score=27.81 Aligned_cols=46 Identities=13% Similarity=0.044 Sum_probs=31.4
Q ss_pred cHHHHHHHHHHHHHc-------CCHHH---HHHHHHHhhc-cCCHHHHHHHHHHHHH
Q 019734 252 SHRQARKWMKRAADC-------GHGKA---QLEHGLGLFT-EGEMMKAVVYLELATR 297 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~-------~~~~a---~~~lg~~~~~-~~~~~~A~~~~~~A~~ 297 (336)
-.+.|...|+.|.+. .+|-. ..|....|++ .+++++|+..-+.|++
T Consensus 148 ~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 148 IIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 356788888888652 23322 2455555655 7999999998888765
No 254
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=69.92 E-value=97 Score=31.28 Aligned_cols=220 Identities=13% Similarity=0.039 Sum_probs=124.1
Q ss_pred HhhhHHHHHHHHHhC-CCCC-------HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHcCCH----HHHHHHHHHHhc
Q 019734 82 RAASLVCKSWNDALR-PLRE-------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST----LAMVDAGLMYWE 149 (336)
Q Consensus 82 ~~a~~~~~~~~~~~~-~~~~-------~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~~~~----~a~~~lg~~~~~ 149 (336)
.++..+....+.... ..|. ..+...||.+|.- .+ -++++..+...+...+. .+.+.||.++.-
T Consensus 428 ~~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~G----S~-~eev~e~L~~~L~dd~~~~~~~AalALGli~vG 502 (963)
T 4ady_A 428 RDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMG----SA-NIEVYEALKEVLYNDSATSGEAAALGMGLCMLG 502 (963)
T ss_dssp HHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHSTT----CC-CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCccccccccccHHHHHHHHHHHHHHhcC----CC-CHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcc
Confidence 356666666665532 1111 2477789998763 23 35677778877765543 466788999988
Q ss_pred CCCHHHHHHHHHHHHHcCCHH----HHHHHHHHHHH-HHHHHHH-HHHHHcCCHH----HHHHHHHHHhcCCCCccCHHH
Q 019734 150 MDKKEAAISLYRQAAVLGDPA----GQFNLGISYLQ-EEAVKLL-YQASIAGHVR----AQYQLALCLHRGRGVDFNLQE 219 (336)
Q Consensus 150 ~~~~~~A~~~~~~a~~~~~~~----a~~~Lg~~~~~-~~A~~~~-~ka~~~~~~~----a~~~lg~~~~~g~g~~~~~~~ 219 (336)
.|+.+-....+..+.+..+.. +...||.++.. .++..-+ +......++. +.+-+|..|.. .+|...
T Consensus 503 Tgn~~ai~~LL~~~~e~~~e~vrR~aalgLGll~~g~~e~~~~li~~L~~~~dp~vRygaa~alglAyaG----TGn~~a 578 (963)
T 4ady_A 503 TGKPEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQELADDLITKMLASDESLLRYGGAFTIALAYAG----TGNNSA 578 (963)
T ss_dssp CCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCGGGGHHHHHHHHHCSCHHHHHHHHHHHHHHTTT----SCCHHH
T ss_pred cCCHHHHHHHHHHHhccCcHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcC----CCCHHH
Confidence 888776666666666554332 44556666665 4444444 3334445554 34456666654 667544
Q ss_pred HHHHHHHHHHCCCH----HHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHH----HHHHHHhhccCCHHHHHHH
Q 019734 220 AARWYLRAAEGGYV----RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVY 291 (336)
Q Consensus 220 A~~~~~~a~~~~~~----~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~----~~lg~~~~~~~~~~~A~~~ 291 (336)
-...+..+.+..+. .|...||.+... +.+.+...+....+.+++... ..||.+.-..++ .+++..
T Consensus 579 Iq~LL~~~~~d~~d~VRraAViaLGlI~~g------~~e~v~rlv~~L~~~~d~~VR~gAalALGli~aGn~~-~~aid~ 651 (963)
T 4ady_A 579 VKRLLHVAVSDSNDDVRRAAVIALGFVLLR------DYTTVPRIVQLLSKSHNAHVRCGTAFALGIACAGKGL-QSAIDV 651 (963)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHHHHTSS------SCSSHHHHTTTGGGCSCHHHHHHHHHHHHHHTSSSCC-HHHHHH
T ss_pred HHHHHHHhccCCcHHHHHHHHHHHHhhccC------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCCc-HHHHHH
Confidence 44477777655432 355566655432 222333344333344555444 566766555554 678888
Q ss_pred HHHHHHcCcHH----HHHHHHHHHhhcChh
Q 019734 292 LELATRAGETA----ADHVKNVILQQLSAT 317 (336)
Q Consensus 292 ~~~A~~~~~~~----a~~~~~~~~~~~~~~ 317 (336)
+++...-.+.. |...++.+.......
T Consensus 652 L~~L~~D~d~~Vrq~Ai~ALG~Ig~gtnna 681 (963)
T 4ady_A 652 LDPLTKDPVDFVRQAAMIALSMILIQQTEK 681 (963)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHSTTCCTT
T ss_pred HHHHccCCCHHHHHHHHHHHHHHhcCCccc
Confidence 88877644433 444455554443333
No 255
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=69.58 E-value=42 Score=32.93 Aligned_cols=43 Identities=9% Similarity=-0.050 Sum_probs=34.1
Q ss_pred cHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHH
Q 019734 252 SHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLEL 294 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~ 294 (336)
+++-|+...++|+.. ..-..++.|+.+|...||++.|.-.+.-
T Consensus 352 ~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNS 396 (754)
T 4gns_B 352 DYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINS 396 (754)
T ss_dssp CHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhc
Confidence 888888888888774 5677788888888888888888855433
No 256
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=69.35 E-value=48 Score=27.54 Aligned_cols=46 Identities=13% Similarity=0.042 Sum_probs=31.0
Q ss_pred cHHHHHHHHHHHHHc-------CCHHH---HHHHHHHhhc-cCCHHHHHHHHHHHHH
Q 019734 252 SHRQARKWMKRAADC-------GHGKA---QLEHGLGLFT-EGEMMKAVVYLELATR 297 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~-------~~~~a---~~~lg~~~~~-~~~~~~A~~~~~~A~~ 297 (336)
-.+.|...|+.|.+. .+|-. ..|....|++ .+++++|+..-+.|++
T Consensus 146 ~~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 146 VVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 346778888887652 23322 2555666665 8999999998888765
No 257
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=67.57 E-value=43 Score=26.33 Aligned_cols=69 Identities=13% Similarity=0.160 Sum_probs=36.8
Q ss_pred CCHHHHHHHHHHHHHc-CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHHHHHHHHHH
Q 019734 119 KNLDKALDSFLKGAAR-GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQ----EEAVKLLYQAS 192 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~-~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~~~~----~~A~~~~~ka~ 192 (336)
.|++.++ |-.|.-. ..++-...++.+++..|++..++-.+ ...+...+.+.-..||.. .+|+.++++.+
T Consensus 16 ~dYdt~~--fLsa~L~~~~~eY~lL~~I~LyyngEY~R~Lf~L---~~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 16 RDYETAI--FLAACLLPCKPEYRMLMSIVLYLNGEYTRALFHL---HKLNTCTSKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp TCHHHHH--HHHHHHC----CTHHHHHHHHHHTTCHHHHHHHH---HTCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccccHHH--HHHHHHccCChHHHhhhhhhhhhcchHhHHHHHH---HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666554 3333322 34455566788888888888776553 233444555555555544 55555555554
No 258
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=64.55 E-value=8.1 Score=26.83 Aligned_cols=35 Identities=9% Similarity=0.091 Sum_probs=24.9
Q ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 019734 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165 (336)
Q Consensus 118 ~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 165 (336)
..-.++|+.++.+|++. -..|++++|+.+|..+++
T Consensus 9 ~~~l~~Ai~lv~~Ave~-------------D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 9 DSDSTAAVAVLKRAVEL-------------DAESRYQQALVCYQEGID 43 (93)
T ss_dssp CCHHHHHHHHHHHHHHH-------------HHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH-------------HHhCCHHHHHHHHHHHHH
Confidence 34467888888887654 256788888888887764
No 259
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=64.31 E-value=73 Score=27.79 Aligned_cols=133 Identities=14% Similarity=0.121 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHHHHcCCH----HHHH---HHHHHHhcCCCHHHHHHHHHHHH----HcCCHHHHHHHHHHHHHHHHHHH
Q 019734 119 KNLDKALDSFLKGAARGST----LAMV---DAGLMYWEMDKKEAAISLYRQAA----VLGDPAGQFNLGISYLQEEAVKL 187 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~~~~----~a~~---~lg~~~~~~~~~~~A~~~~~~a~----~~~~~~a~~~Lg~~~~~~~A~~~ 187 (336)
...++-+.=++..++.|+- +|+- -+..-|...+++++|++.+...+ +.+-...-..|+..+. +.
T Consensus 10 ~~~~~~i~rl~~~I~~G~y~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llv-----ev 84 (336)
T 3lpz_A 10 NKIERIIARLQRRIAEGQPEEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLV-----DT 84 (336)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-----HH
T ss_pred hHHHHHHHHHHHHHhCCCCccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHH-----HH
Confidence 4567777778888888764 5543 45556677899999999877754 3355555566666554 44
Q ss_pred HHHHHHcCCHHHHHHHHHHHhcCCC-C---ccCHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCCCCcccHHHHHHHH
Q 019734 188 LYQASIAGHVRAQYQLALCLHRGRG-V---DFNLQEAARWYLRAA--EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 260 (336)
Q Consensus 188 ~~ka~~~~~~~a~~~lg~~~~~g~g-~---~~~~~~A~~~~~~a~--~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~ 260 (336)
|.++--.-+.+..-.|..++..-.. . ..=.++|+.|=.+.- ..|++.-+..+|..|.+.. ++.+|..+|
T Consensus 85 y~~~~~~~~~~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~----~~~~Ae~H~ 159 (336)
T 3lpz_A 85 FRQAGQRVDGASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEG----EFEAAEKHL 159 (336)
T ss_dssp HHHHTCCCCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTT----CHHHHHHHH
T ss_pred HHHcCCCCCHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccC----CHHHHHHHH
Confidence 4444222244566666766653110 0 001234555555431 3478888888888887643 777777777
No 260
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=63.90 E-value=60 Score=26.69 Aligned_cols=46 Identities=15% Similarity=0.045 Sum_probs=31.2
Q ss_pred cHHHHHHHHHHHHHc-------CCHHH---HHHHHHHhhc-cCCHHHHHHHHHHHHH
Q 019734 252 SHRQARKWMKRAADC-------GHGKA---QLEHGLGLFT-EGEMMKAVVYLELATR 297 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~-------~~~~a---~~~lg~~~~~-~~~~~~A~~~~~~A~~ 297 (336)
-.++|...|+.|.+. .+|-- ..|....|++ .++.++|+..-+.|+.
T Consensus 145 ~~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 145 AAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345778888888652 23322 2455555655 8999999999888875
No 261
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=63.28 E-value=12 Score=25.29 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 253 HRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 253 ~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
.++|+.+.++|++ ....|++++|+.+|..|++
T Consensus 16 ~~~Ai~lv~~Ave-------------~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 16 EEMARKYAINAVK-------------ADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHHH-------------HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-------------HHHhccHHHHHHHHHHHHH
Confidence 4556666666543 3557788888888888776
No 262
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=63.05 E-value=54 Score=25.81 Aligned_cols=26 Identities=8% Similarity=-0.259 Sum_probs=16.1
Q ss_pred HHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 273 LEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 273 ~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
..+|.++...|+.++|+.+|......
T Consensus 118 ~l~a~lltq~g~r~EaI~y~~~Sf~~ 143 (242)
T 3kae_A 118 SLLGDLCTLSGYREEGIGHYVRSFGK 143 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHhhhHhhhhcCC
Confidence 44566666666666666666665543
No 263
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=62.06 E-value=13 Score=25.09 Aligned_cols=31 Identities=29% Similarity=0.341 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 254 RQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 254 ~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
++|+.+.++|++ ....|++++|+.+|..|++
T Consensus 9 ~~Ai~lv~~Ave-------------~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 9 DMARKYAILAVK-------------ADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHH-------------HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-------------HHHhccHHHHHHHHHHHHH
Confidence 455666666543 3557778888888777776
No 264
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=61.97 E-value=34 Score=23.20 Aligned_cols=33 Identities=21% Similarity=0.196 Sum_probs=21.3
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 252 SHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
...+|+....+|++. ...|++++|+.+|..|++
T Consensus 12 ~~~~A~~lv~~Ave~-------------D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 12 QSTAAATVLKRAVEL-------------DSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHHHHHH-------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-------------HHcCCHHHHHHHHHHHHH
Confidence 444566666665543 456777888888777775
No 265
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=60.82 E-value=34 Score=30.49 Aligned_cols=53 Identities=11% Similarity=-0.035 Sum_probs=28.7
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH----HHHHHHHHHH
Q 019734 139 AMVDAGLMYWEMDKKEAAISLYRQAAVL--GDPAGQFNLGISYLQ----EEAVKLLYQA 191 (336)
Q Consensus 139 a~~~lg~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~~~~----~~A~~~~~ka 191 (336)
+...++..+...|++++|+..+.+++.. -+..++..|-.++.. .+|+..|++.
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~ 231 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRV 231 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3444555555666666666666665433 244455555444444 5666666554
No 266
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=59.00 E-value=11 Score=25.58 Aligned_cols=33 Identities=18% Similarity=0.093 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 019734 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165 (336)
Q Consensus 120 ~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 165 (336)
...+|+.+..+|+.. -..|++++|+.+|..+++
T Consensus 9 ~l~~A~~l~~~Av~~-------------D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 9 FLTKGIELVQKAIDL-------------DTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHHHHH-------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-------------HHcCCHHHHHHHHHHHHH
Confidence 456777777777533 356888888888887774
No 267
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=58.38 E-value=36 Score=34.75 Aligned_cols=93 Identities=10% Similarity=-0.039 Sum_probs=65.3
Q ss_pred HHHHHHHHHHcCCCCcccHHHHHHHHHHHHHc------CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC-cHHHHHHH
Q 019734 235 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADC------GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG-ETAADHVK 307 (336)
Q Consensus 235 a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~------~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~-~~~a~~~~ 307 (336)
.+..|-..|.+ .++.++|...|...... -+...+..|-..|.+.|+.++|...|++..+.| .++...+.
T Consensus 129 TynaLIdglcK----~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYn 204 (1134)
T 3spa_A 129 RLLAFFKCCLL----TDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYA 204 (1134)
T ss_dssp HHHHHHHHHHH----HTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHHHh----CCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 34445455544 33999999999765432 367788888889999999999999999999887 45665555
Q ss_pred HHHHhhcChhc-HHHHHHHHHHhhc
Q 019734 308 NVILQQLSATS-RDRAMLVVDSWRA 331 (336)
Q Consensus 308 ~~~~~~~~~~~-~~~a~~~~~~~~~ 331 (336)
..+.-....++ .++|..+++++.+
T Consensus 205 tLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 205 AALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 55544444444 3567777777653
No 268
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=58.29 E-value=26 Score=30.97 Aligned_cols=65 Identities=15% Similarity=-0.004 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHH-------cCCHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD-------CGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 231 ~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~-------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
.++.++-+||.+-.... ......++..|.+|+. ..+...+..+|-.+++.+++.+|++.|-.|..
T Consensus 253 rYPmALgnLgDLEe~~p--t~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 253 TYPMAIANLGDLEEISP--TPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp TCHHHHHHHHHHHHHSC--CTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHHhcCC--CCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 35677777777654321 1122236666666654 24566677777778888888888888877754
No 269
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=58.27 E-value=32 Score=30.86 Aligned_cols=54 Identities=11% Similarity=-0.042 Sum_probs=27.8
Q ss_pred HHHHHHhcCCCCcCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 019734 106 RWGKRFKHGRGVRKNLDKALDSFLKGAAR----GS----TLAMVDAGLMYWEMDKKEAAISLYRQA 163 (336)
Q Consensus 106 ~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~~----~~a~~~lg~~~~~~~~~~~A~~~~~~a 163 (336)
.||.+|.. .+++.+|...+.+..+. ++ .+.+..-..+|...+++.++...|.+|
T Consensus 104 kL~~l~~~----~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a 165 (394)
T 3txn_A 104 RLIALYFD----TALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSA 165 (394)
T ss_dssp HHHHHHHH----TTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHH----hhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 45555555 35666665555555432 11 233344445555556666666665555
No 270
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=57.47 E-value=94 Score=27.50 Aligned_cols=60 Identities=3% Similarity=-0.242 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcC--CHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 234 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG--HGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 234 ~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
.+...++..+... +++.+++..+++.+... +...+..|-.++...|+..+|...|++..+
T Consensus 172 ~a~~~~~~~~l~~----g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 172 LAHTAKAEAEIAC----GRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHT----TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455566666542 28999999999998754 567888888999999999999999999764
No 271
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=56.88 E-value=39 Score=30.54 Aligned_cols=59 Identities=12% Similarity=0.128 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc----C-CHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 019734 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR----G-STLAMVDAGLMYWEMDKKEAAISLYRQA 163 (336)
Q Consensus 101 ~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~----~-~~~a~~~lg~~~~~~~~~~~A~~~~~~a 163 (336)
..++..||..|.. .||+++|.+.|.++-.. + -.+.++..-.++...+|+..+..++.++
T Consensus 131 ~~~~~~la~~~~~----~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka 194 (429)
T 4b4t_R 131 AQAWINLGEYYAQ----IGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAV 194 (429)
T ss_dssp SSCCHHHHHHHHH----HCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3455555555555 35555666665554432 1 2344445555555555666666555555
No 272
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=56.30 E-value=54 Score=23.69 Aligned_cols=32 Identities=19% Similarity=0.152 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 253 HRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 253 ~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
..+|+.++.+|++ ....|++++|+.+|..|++
T Consensus 15 l~kAi~lv~~Ave-------------~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 15 LQKAIDLASKAAQ-------------EDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHH-------------HHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-------------HHHccCHHHHHHHHHHHHH
Confidence 5677777777753 2345677777777777665
No 273
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=56.08 E-value=1.1e+02 Score=27.75 Aligned_cols=93 Identities=12% Similarity=-0.022 Sum_probs=64.8
Q ss_pred HHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH-C-C--C----HHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHH----
Q 019734 198 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAE-G-G--Y----VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD---- 265 (336)
Q Consensus 198 ~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~-~-~--~----~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~---- 265 (336)
.....|+.+|+. .+++.+|...+..... . + + .+.+.....+|.. .+|+.+|...++++..
T Consensus 138 rl~~~La~i~e~----~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~----~~d~~~a~~~~~ki~~~~~~ 209 (445)
T 4b4t_P 138 RVTKDLVEIKKE----EGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSIL----KGDYSQATVLSRKILKKTFK 209 (445)
T ss_dssp HHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----ccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHhhcc
Confidence 345678888888 7899999988887632 1 1 1 3445555555554 3499999999998743
Q ss_pred -cCCHH----HHHHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 266 -CGHGK----AQLEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 266 -~~~~~----a~~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
..++. -+...|.++...++|.+|..+|..+.+.
T Consensus 210 ~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 210 NPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 13332 2356678888899999999999998763
No 274
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=55.10 E-value=1.9e+02 Score=29.72 Aligned_cols=63 Identities=11% Similarity=0.024 Sum_probs=41.9
Q ss_pred CHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc---C----------------------CHHHHHHHHHHHhcCCCHH
Q 019734 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR---G----------------------STLAMVDAGLMYWEMDKKE 154 (336)
Q Consensus 100 ~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~---~----------------------~~~a~~~lg~~~~~~~~~~ 154 (336)
++...|.+|.+|.. .+++++|..+|++|+.. . .+.-++.+..++...+-++
T Consensus 841 ~~~~~yl~g~~~L~----~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~ 916 (1139)
T 4fhn_B 841 DPIAVYLKALIYLK----SKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYI 916 (1139)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCH
T ss_pred CcHHHHHHHHHHHh----cCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHH
Confidence 56667888888888 57888888888887531 0 1123445556666667777
Q ss_pred HHHHHHHHHHHc
Q 019734 155 AAISLYRQAAVL 166 (336)
Q Consensus 155 ~A~~~~~~a~~~ 166 (336)
.++.+.+.|++.
T Consensus 917 ~vi~fa~lAi~~ 928 (1139)
T 4fhn_B 917 DALEFSLLADAS 928 (1139)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 777777777643
No 275
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=54.83 E-value=12 Score=30.22 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=13.0
Q ss_pred HHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 273 LEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 273 ~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
|.+|.++.-.+++.+|...+..|.+.
T Consensus 18 YYlGr~~~~~~~y~~A~~~L~~A~~~ 43 (203)
T 3t5x_A 18 YYVGRKAMFDSDFKQAEEYLSFAFEH 43 (203)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 44455444455555555555555444
No 276
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=54.77 E-value=49 Score=22.74 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=20.5
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 252 SHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
-.++|+...++|++ ....|++++|+.+|..|++
T Consensus 11 ~l~~Ai~lv~~Ave-------------~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 11 DSTAAVAVLKRAVE-------------LDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHHHH-------------HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------------HHHhCCHHHHHHHHHHHHH
Confidence 45566666666654 2445666777776666665
No 277
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=53.88 E-value=19 Score=35.32 Aligned_cols=47 Identities=11% Similarity=-0.012 Sum_probs=25.4
Q ss_pred CChhHHhhhHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHH
Q 019734 77 TLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFL 129 (336)
Q Consensus 77 ~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~ 129 (336)
..++++-|..++++....+|. .-..|+.|+.+|.. .+|++.|+-.+.
T Consensus 349 ~K~~~elAL~~Ak~AV~~aPs--eF~tW~~La~vYi~----l~d~e~ALLtLN 395 (754)
T 4gns_B 349 NRGDYELALGVSNTSTELALD--SFESWYNLARCHIK----KEEYEKALFAIN 395 (754)
T ss_dssp HTTCHHHHHHHHHHHHHHCSS--CHHHHHHHHHHHHH----TTCHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHHHhcCch--hhHHHHHHHHHHHH----hccHHHHHHHHh
Confidence 445555555555555555555 45555555555555 355555554443
No 278
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=53.83 E-value=97 Score=25.89 Aligned_cols=46 Identities=22% Similarity=0.057 Sum_probs=31.4
Q ss_pred cHHHHHHHHHHHHHc------CCHHH---HHHHHHHhhc-cCCHHHHHHHHHHHHH
Q 019734 252 SHRQARKWMKRAADC------GHGKA---QLEHGLGLFT-EGEMMKAVVYLELATR 297 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~------~~~~a---~~~lg~~~~~-~~~~~~A~~~~~~A~~ 297 (336)
-.++|...|+.|.+. -+|-- ..|....|++ .++.++|+..-+.|++
T Consensus 171 ~~e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 171 SAEDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345778888888652 22221 2555565665 8999999999888875
No 279
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=53.43 E-value=14 Score=25.14 Aligned_cols=34 Identities=9% Similarity=0.029 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 019734 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 165 (336)
..-..|+.+..+|++. -..|++++|+.+|..+++
T Consensus 11 ~~~~~A~~lv~~Ave~-------------D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 11 PQSTAAATVLKRAVEL-------------DSESRYPQALVCYQEGID 44 (86)
T ss_dssp CHHHHHHHHHHHHHHH-------------HHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-------------HHcCCHHHHHHHHHHHHH
Confidence 3456677777777654 356778888888877764
No 280
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=53.04 E-value=11 Score=27.51 Aligned_cols=32 Identities=34% Similarity=0.381 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 019734 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165 (336)
Q Consensus 121 ~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 165 (336)
+.+|+.++.+|+.. -..+++++|+.+|..|++
T Consensus 15 l~kAi~lv~~Ave~-------------D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 15 LQKAIDLASKAAQE-------------DKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHHH-------------HHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------------HHccCHHHHHHHHHHHHH
Confidence 56777777777643 244777777777777664
No 281
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=51.47 E-value=36 Score=30.65 Aligned_cols=65 Identities=8% Similarity=-0.101 Sum_probs=36.8
Q ss_pred CCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHH-------cCCHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 231 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD-------CGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 231 ~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~-------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
.++.++-+||.+-.... ......++..|.+|+. ..+...+..+|-.|++.+++.+|+..|-.|..
T Consensus 275 rYPmALgnLgDLEe~~p--t~gr~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 275 RYPMALGNLADLEELEP--TPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp TCHHHHHHHHHHHHHSC--CTTCCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHhhcCC--CCCCCCHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 35566666666553321 0111225555555543 24556666777777777777777777777654
No 282
>3bge_A Predicted ATPase; structural genomics, predicted AAA+ATPase C-terminal fragmen protein structure initiative; 1.85A {Haemophilus influenzae} SCOP: a.80.1.2
Probab=50.71 E-value=94 Score=24.80 Aligned_cols=25 Identities=12% Similarity=0.054 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Q 019734 183 EAVKLLYQASIAGHVRAQYQLALCL 207 (336)
Q Consensus 183 ~A~~~~~ka~~~~~~~a~~~lg~~~ 207 (336)
.|...++.+-..|.|++...|+.+-
T Consensus 65 ~a~aa~~a~~~iG~PE~~i~Laqav 89 (201)
T 3bge_A 65 VALAAWDCFTRVGAYEGERAIAQAI 89 (201)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCcHHHHHHHHHH
Confidence 3455555555567777776666543
No 283
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=49.67 E-value=83 Score=27.83 Aligned_cols=72 Identities=15% Similarity=0.064 Sum_probs=51.7
Q ss_pred HHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc-------CCHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 019734 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR-------GSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164 (336)
Q Consensus 92 ~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~-------~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~ 164 (336)
++...-...++++-+||.+-..-. . .....++..|.+|+.. .|..-+..+|-.+++.+++.+|+..+..|.
T Consensus 246 yD~GhL~rYPmALgnLgDLEe~~p-t-~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa 323 (472)
T 3re2_A 246 YDMGHIKTYPMAIANLGDLEEISP-T-PGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAG 323 (472)
T ss_dssp HHTTTTTTCHHHHHHHHHHHHHSC-C-TTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhccchhhCchhhcchhhHHhcCC-C-CCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHH
Confidence 344444457999999999866521 1 1222378888888753 356667778888899999999999999886
Q ss_pred H
Q 019734 165 V 165 (336)
Q Consensus 165 ~ 165 (336)
+
T Consensus 324 ~ 324 (472)
T 3re2_A 324 Y 324 (472)
T ss_dssp H
T ss_pred H
Confidence 4
No 284
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=49.50 E-value=1.1e+02 Score=25.02 Aligned_cols=31 Identities=10% Similarity=0.083 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Q 019734 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~ 166 (336)
.+.-+...+.++...|++.+|...|+.+++.
T Consensus 149 ~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 179 (223)
T 4aez_C 149 SSIFYEEYANYFESRGLFQKADEVYQKGKRM 179 (223)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 4555667788888999999999999999875
No 285
>2r9g_A AAA ATPase, central region; structural genomics, PSI-2, protein structure initia YORK SGX research center for structural genomics, nysgxrc; 2.09A {Enterococcus faecium} SCOP: a.80.1.2 PDB: 2qw6_A
Probab=49.46 E-value=61 Score=25.95 Aligned_cols=76 Identities=17% Similarity=0.069 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHcCCHH-HHHHHHHHHhcCCCHHH-HHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 019734 121 LDKALDSFLKGAARGSTL-AMVDAGLMYWEMDKKEA-AISLYRQAAVL---GDPAGQFNLGISYLQEEAVKLLYQASIAG 195 (336)
Q Consensus 121 ~~~A~~~~~~A~~~~~~~-a~~~lg~~~~~~~~~~~-A~~~~~~a~~~---~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~ 195 (336)
.-.-+..|.|+++..+++ |++-|++++..+ |+.- |+.+..-|.+- .||.|+. .|+..++.+-..|
T Consensus 14 HYd~iSAf~KSiRGSDpDAAly~LaRml~~G-Dp~~IaRRLvi~AsEDIGlAdP~Al~---------~a~aa~~a~~~iG 83 (204)
T 2r9g_A 14 HYDVISAFQKSIRGSDVDAALHYLARLVEAG-DLASICRRLMVIGYEDIGLGNPAAAA---------RTVNAVLAAEKLG 83 (204)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHTTGGGCHHHHH---------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhccCCCHHHHH---------HHHHHHHHHHHhC
Confidence 344566677777665554 455666666555 5543 33333333332 3555543 3444455555557
Q ss_pred CHHHHHHHHHH
Q 019734 196 HVRAQYQLALC 206 (336)
Q Consensus 196 ~~~a~~~lg~~ 206 (336)
.|++...|+.+
T Consensus 84 ~PE~~i~Laqa 94 (204)
T 2r9g_A 84 LPEARIPLADV 94 (204)
T ss_dssp TTTTHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 77766666654
No 286
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.07 E-value=15 Score=26.60 Aligned_cols=32 Identities=31% Similarity=0.368 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 019734 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164 (336)
Q Consensus 120 ~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~ 164 (336)
.+++|+.+..+|+..+ +.|+.+.|+.+|++.+
T Consensus 18 ~h~~AF~~Is~AL~~D-------------E~g~k~~Al~lYk~GI 49 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTD-------------ELGQKEEAKNYYKQGI 49 (116)
T ss_dssp HHHHHHHHHHHHHHHH-------------HHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhh-------------hcCCHHHHHHHHHHHH
Confidence 4566677776666542 2377888888887766
No 287
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=46.78 E-value=93 Score=23.63 Aligned_cols=43 Identities=7% Similarity=-0.185 Sum_probs=31.3
Q ss_pred HHHHHHHHHHc----CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Q 019734 124 ALDSFLKGAAR----GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166 (336)
Q Consensus 124 A~~~~~~A~~~----~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~ 166 (336)
+...|...... ..+.-+...+..+...|++.+|...|+.+++.
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQN 130 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 44445544443 24555667788888999999999999999976
No 288
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=45.74 E-value=1e+02 Score=23.76 Aligned_cols=32 Identities=6% Similarity=-0.014 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC
Q 019734 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167 (336)
Q Consensus 136 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~ 167 (336)
.+.-+...+.++...|++.+|...|+.+++.+
T Consensus 95 ~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~ 126 (164)
T 2wvi_A 95 LAQFYISWAEEYEARENFRKADAIFQEGIQQK 126 (164)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 45566677888889999999999999999764
No 289
>3ctd_A Putative ATPase, AAA family; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Prochlorococcus marinus subsp} SCOP: a.80.1.2
Probab=42.90 E-value=98 Score=24.95 Aligned_cols=75 Identities=12% Similarity=0.017 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHcCCHH-HHHHHHHHHhcCCCHHH-HHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Q 019734 123 KALDSFLKGAARGSTL-AMVDAGLMYWEMDKKEA-AISLYRQAAVL---GDPAGQFNLGISYLQEEAVKLLYQASIAGHV 197 (336)
Q Consensus 123 ~A~~~~~~A~~~~~~~-a~~~lg~~~~~~~~~~~-A~~~~~~a~~~---~~~~a~~~Lg~~~~~~~A~~~~~ka~~~~~~ 197 (336)
.-+..|.|+++..+++ |++.|++++..+.|+.- |+.+..-|.+- .||.|+ ..|...++.+-..|.|
T Consensus 37 d~ISAf~KSiRGSDpDAALywLaRMl~~GEDp~~IaRRLvi~AsEDIGlAdP~Al---------~~a~aa~~a~~~iG~P 107 (213)
T 3ctd_A 37 DVISAFIKSIRGSDPDATLYWLANMVEAGEDPNFIFRRLLISACEDIGLADPNAI---------VVVQSCCDAFDRVGFP 107 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTGGGSTTHH---------HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhccCCCHHHH---------HHHHHHHHHHHHhCCC
Confidence 3455555565554443 33444555433334432 22222223221 234443 2344445545555776
Q ss_pred HHHHHHHHH
Q 019734 198 RAQYQLALC 206 (336)
Q Consensus 198 ~a~~~lg~~ 206 (336)
++...|+.+
T Consensus 108 E~~i~Laqa 116 (213)
T 3ctd_A 108 EGLFFLSQA 116 (213)
T ss_dssp TTHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666554
No 290
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=42.70 E-value=62 Score=29.15 Aligned_cols=64 Identities=8% Similarity=-0.104 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHH-------cCCHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 232 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD-------CGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 232 ~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~-------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
++.|+-+||.+-..... .....+...|++|+. ..+...+..+|-.++..+++.+|+..|..|..
T Consensus 261 YPmALgnLgDLEei~pt--~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 261 YPMALGNLADLEELEPT--PGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp CHHHHHHHHHHHHHSCC--TTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cchhhhcccCHhhcCCC--CCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhh
Confidence 45555556555533210 112233445555544 24455566666667777777777777777654
No 291
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=42.20 E-value=1.4e+02 Score=27.01 Aligned_cols=73 Identities=14% Similarity=0.007 Sum_probs=52.0
Q ss_pred HHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc-------CCHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 019734 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR-------GSTLAMVDAGLMYWEMDKKEAAISLYRQA 163 (336)
Q Consensus 91 ~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~-------~~~~a~~~lg~~~~~~~~~~~A~~~~~~a 163 (336)
+++...-...++|+-+||.+-..-. ..+ -..++..|.+|+.. .|..-+..+|-.|++.+++.+|+..+..|
T Consensus 267 Lyd~GhL~rYPmALgnLgDLEe~~p-t~g-r~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~A 344 (550)
T 3u84_A 267 LYDLGHLERYPMALGNLADLEELEP-TPG-RPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADT 344 (550)
T ss_dssp HHHTTTTTTCHHHHHHHHHHHHHSC-CTT-CCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhccchhhCchhhcchhhHhhcCC-CCC-CCCHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHH
Confidence 3444444457999999998866521 111 22378888888753 36667778888999999999999999988
Q ss_pred HH
Q 019734 164 AV 165 (336)
Q Consensus 164 ~~ 165 (336)
.+
T Consensus 345 a~ 346 (550)
T 3u84_A 345 AT 346 (550)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 292
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=39.97 E-value=1.3e+02 Score=27.07 Aligned_cols=74 Identities=14% Similarity=0.004 Sum_probs=53.0
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHc-------CCHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 019734 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR-------GSTLAMVDAGLMYWEMDKKEAAISLYRQ 162 (336)
Q Consensus 90 ~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~~~-------~~~~a~~~lg~~~~~~~~~~~A~~~~~~ 162 (336)
-+++...-...++|+-+||.+-.-.. ....+.++..|.+|+.. .+..-+..+|-.+++.+++.+|+..+..
T Consensus 251 lLyd~Ghl~~YPmALgnLgDLEei~p--t~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~ 328 (489)
T 4gq4_A 251 LLYDLGHLERYPMALGNLADLEELEP--TPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWAD 328 (489)
T ss_dssp HHHHHTTTTTCHHHHHHHHHHHHHSC--CTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHhccchhhcchhhhcccCHhhcCC--CCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhh
Confidence 34455555568999999999876532 12233567889888863 3556667778888889999999999998
Q ss_pred HHH
Q 019734 163 AAV 165 (336)
Q Consensus 163 a~~ 165 (336)
|++
T Consensus 329 aa~ 331 (489)
T 4gq4_A 329 TAT 331 (489)
T ss_dssp HHH
T ss_pred hhh
Confidence 863
No 293
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=39.13 E-value=73 Score=32.20 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=25.4
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHH
Q 019734 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGA 132 (336)
Q Consensus 90 ~~~~~~~~~~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~A~ 132 (336)
.+..-.+. ++-..|.+|.+|.. .|++++|..+|++|+
T Consensus 831 eL~~~~~~--t~~~~yv~gr~~L~----~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 831 QLIGWLNS--DPIAVYLKALIYLK----SKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHGGGCCS--SHHHHHHHHHHHHH----TTCHHHHHHHHHTCC
T ss_pred HHHhhcCC--ChHHHHHHHHHHHH----cCCHHHHHHHHHHHh
Confidence 34444443 56667788888887 578888888888776
No 294
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.95 E-value=94 Score=22.40 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=20.4
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 252 SHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
.+++|+.+..+|+. ..+.|+.++|+.+|++++.
T Consensus 18 ~h~~AF~~Is~AL~-------------~DE~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 18 AYKKAFLFVNKGLN-------------TDELGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHHHHHHH-------------HHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-------------hhhcCCHHHHHHHHHHHHH
Confidence 34455555555554 3334778888888887765
No 295
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=36.76 E-value=54 Score=24.10 Aligned_cols=18 Identities=22% Similarity=0.181 Sum_probs=9.0
Q ss_pred CCHHHHHHHHHHHHHcCC
Q 019734 119 KNLDKALDSFLKGAARGS 136 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~~~ 136 (336)
.++.+|..|+++....++
T Consensus 88 ~~L~~A~~~~~~y~~t~d 105 (126)
T 2npu_A 88 RDLMEAQEWCRKYMKSGN 105 (126)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 355555555555544443
No 296
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=36.29 E-value=2.9e+02 Score=26.27 Aligned_cols=112 Identities=13% Similarity=0.017 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHcC--CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC-CC-HHHHHHHHHHHHcCCCCcccHHHHH
Q 019734 182 EEAVKLLYQASIAG--HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG-GY-VRAMYNTSLCYSFGEGLPLSHRQAR 257 (336)
Q Consensus 182 ~~A~~~~~ka~~~~--~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~-~~-~~a~~~lg~~~~~~~g~~~~~~~A~ 257 (336)
+.|...|.+..... .......+-..+.......+...++..|+.+.... .+ ....+..+..+.. +|.+.|.
T Consensus 231 ~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Alr~-----~d~~~a~ 305 (618)
T 1qsa_A 231 ENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGT-----GDRRGLN 305 (618)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH-----TCHHHHH
T ss_pred HHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHHHHC-----CCHHHHH
Confidence 77777777665421 22222222211211111133366778888776433 22 2334444544432 3999999
Q ss_pred HHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHc
Q 019734 258 KWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 298 (336)
Q Consensus 258 ~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~ 298 (336)
.|+++.... ......|++|..+...|+.++|..+|+++...
T Consensus 306 ~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~~ 348 (618)
T 1qsa_A 306 TWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQ 348 (618)
T ss_dssp HHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred HHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhcC
Confidence 999887542 45777899999999999999999999998864
No 297
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=36.16 E-value=72 Score=23.75 Aligned_cols=43 Identities=12% Similarity=-0.124 Sum_probs=27.6
Q ss_pred CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 019734 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165 (336)
Q Consensus 117 ~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 165 (336)
..+|.+++..|+++|... +..+......|+++.|.-..++|++
T Consensus 2 ~~~~~ee~~~wl~~A~~d------l~~A~~~~~~g~y~~a~F~aqQA~E 44 (141)
T 3o10_A 2 SVGNPVEARRWLRQARAN------FSAARNDLHKNANEWVCFKCYLSTK 44 (141)
T ss_dssp CCCCHHHHHHHHHHHHHH------HHHHGGGTTTTCHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHhh------hhHHhhHHhhCccceEeeehhHHHH
Confidence 346888888888887532 3344455556777777666666664
No 298
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=35.85 E-value=7.7 Score=32.54 Aligned_cols=41 Identities=12% Similarity=0.111 Sum_probs=0.0
Q ss_pred cCCCCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Q 019734 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166 (336)
Q Consensus 113 ~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~ 166 (336)
.|.|.......|+....+|++.+ ..|++++|+.+|..+++.
T Consensus 12 s~~g~dp~~~~Ai~lv~~AVe~D-------------~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 12 SGLRQDPQSTAAATVLKRAVELD-------------SESRYPQALVCYQEGIDL 52 (257)
T ss_dssp ------------------------------------------------------
T ss_pred ccCCCChhHHHHHHHHHHHHHHH-------------HcCCHHHHHHHHHHHHHH
Confidence 34455667788888888888765 457788888888777653
No 299
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=35.45 E-value=61 Score=27.33 Aligned_cols=48 Identities=15% Similarity=0.001 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Q 019734 119 KNLDKALDSFLKGAAR--GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~ 166 (336)
+++++|+......++. .++.....|-.++.-.|+.++|...++.+++.
T Consensus 11 g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l 60 (273)
T 1zbp_A 11 GQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKL 60 (273)
T ss_dssp TCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Confidence 4566666666666655 35555555555666666666666666666554
No 300
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=34.89 E-value=1.1e+02 Score=22.68 Aligned_cols=67 Identities=13% Similarity=-0.042 Sum_probs=35.0
Q ss_pred CccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHcCCHHHHHHH-HHHhhccCCHHHHHH
Q 019734 213 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH-GLGLFTEGEMMKAVV 290 (336)
Q Consensus 213 ~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~l-g~~~~~~~~~~~A~~ 290 (336)
..+|.+++..|+++|. .....+..... .| +++.|..+.++|++.--......+ |. .-...+...=..
T Consensus 2 ~~~~~ee~~~wl~~A~------~dl~~A~~~~~-~g---~y~~a~F~aqQA~Ek~lKa~L~~~~g~-~p~~H~l~~L~~ 69 (141)
T 3o10_A 2 SVGNPVEARRWLRQAR------ANFSAARNDLH-KN---ANEWVCFKCYLSTKLALIAADYAVRGK-SDKDVKPTALAQ 69 (141)
T ss_dssp CCCCHHHHHHHHHHHH------HHHHHHGGGTT-TT---CHHHHHHHHHHHHHHHHHHHHHHHHSC-CCTTSCHHHHHH
T ss_pred CCCChHHHHHHHHHHH------hhhhHHhhHHh-hC---ccceEeeehhHHHHHHHHHHHHHhcCC-CcccCCcHHHHH
Confidence 3567777777777763 23333333322 22 777777777777765433333333 22 233444444333
No 301
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=34.80 E-value=1.6e+02 Score=22.78 Aligned_cols=14 Identities=21% Similarity=0.114 Sum_probs=5.7
Q ss_pred HHHHHHHHHHcCCH
Q 019734 256 ARKWMKRAADCGHG 269 (336)
Q Consensus 256 A~~~~~~a~~~~~~ 269 (336)
++..+...+...++
T Consensus 144 ~~~~L~~~l~d~~~ 157 (211)
T 3ltm_A 144 AVEPLIKALKDEDG 157 (211)
T ss_dssp GHHHHHHHTTCSSH
T ss_pred HHHHHHHHHcCCCH
Confidence 34444444433333
No 302
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=32.52 E-value=86 Score=32.37 Aligned_cols=93 Identities=15% Similarity=-0.044 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHC-------------------------CCHHHHHHHHHHHHcCCCC
Q 019734 195 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG-------------------------GYVRAMYNTSLCYSFGEGL 249 (336)
Q Consensus 195 ~~~~a~~~lg~~~~~g~g~~~~~~~A~~~~~~a~~~-------------------------~~~~a~~~lg~~~~~~~g~ 249 (336)
.++...|.+|.+|.. .+++++|..+|++|+.. +.+.-++.+..++.+.
T Consensus 840 ~~~~~~yl~g~~~L~----~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~--- 912 (1139)
T 4fhn_B 840 SDPIAVYLKALIYLK----SKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEE--- 912 (1139)
T ss_dssp CCHHHHHHHHHHHHH----TTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHT---
T ss_pred CCcHHHHHHHHHHHh----cCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHc---
Confidence 355667999999998 88999999999987421 0123345565566542
Q ss_pred cccHHHHHHHHHHHHHc---CCHH----HHHHHHHHhhccCCHHHHHHHHHHH
Q 019734 250 PLSHRQARKWMKRAADC---GHGK----AQLEHGLGLFTEGEMMKAVVYLELA 295 (336)
Q Consensus 250 ~~~~~~A~~~~~~a~~~---~~~~----a~~~lg~~~~~~~~~~~A~~~~~~A 295 (336)
+.++.++++.+.|++. ++.. -+.++-..+...++|++|...+...
T Consensus 913 -~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 913 -SAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp -SCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred -CCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 2688888888888873 3332 2355566677788888887777543
No 303
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=31.07 E-value=83 Score=21.69 Aligned_cols=25 Identities=28% Similarity=0.127 Sum_probs=18.7
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHH
Q 019734 140 MVDAGLMYWEMDKKEAAISLYRQAA 164 (336)
Q Consensus 140 ~~~lg~~~~~~~~~~~A~~~~~~a~ 164 (336)
+-..+..+...|.+++||.+.++|+
T Consensus 18 ~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 18 QSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 3455666677889999988888876
No 304
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=30.51 E-value=1.2e+02 Score=20.14 Aligned_cols=33 Identities=15% Similarity=0.015 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 019734 252 SHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 297 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~ 297 (336)
...+|+....+|++ ....|++++|+.+|..|++
T Consensus 9 ~l~~A~~l~~~Av~-------------~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 9 FLTKGIELVQKAID-------------LDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHHHH-------------HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------------HHHcCCHHHHHHHHHHHHH
Confidence 45677777777753 3556888888888888876
No 305
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=29.22 E-value=1.1e+02 Score=23.41 Aligned_cols=65 Identities=8% Similarity=-0.077 Sum_probs=38.9
Q ss_pred HHHHHHHhcCCChhHHhhhHHHHHHHHHhCCCC-C---HHHHHH-HHHHHhcCCCCcCCHHHHHHHHHHHHH
Q 019734 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLR-E---AMVLLR-WGKRFKHGRGVRKNLDKALDSFLKGAA 133 (336)
Q Consensus 67 ~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~---~~a~~~-lg~~~~~g~g~~~~~~~A~~~~~~A~~ 133 (336)
..+..+..+|+.|+|=++.+++....+..+... . ..++.. ++..+.+ -..+|...|...+++|+.
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H--~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKH--FDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHH--HHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHH
Confidence 457788888989999999887777776654320 1 112222 2222222 014677777777777765
No 306
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=28.01 E-value=1.1e+02 Score=19.93 Aligned_cols=25 Identities=12% Similarity=0.105 Sum_probs=13.8
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHc
Q 019734 142 DAGLMYWEMDKKEAAISLYRQAAVL 166 (336)
Q Consensus 142 ~lg~~~~~~~~~~~A~~~~~~a~~~ 166 (336)
.+|..+...|+.++|+.+|-+|+.-
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~V 46 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAV 46 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3455555555666666655555543
No 307
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=27.07 E-value=42 Score=22.34 Aligned_cols=25 Identities=16% Similarity=0.189 Sum_probs=18.5
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHH
Q 019734 141 VDAGLMYWEMDKKEAAISLYRQAAV 165 (336)
Q Consensus 141 ~~lg~~~~~~~~~~~A~~~~~~a~~ 165 (336)
..+|+-|...|+++.|+.+|+.+++
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHH
Confidence 4566777777888888888887764
No 308
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=26.04 E-value=65 Score=27.18 Aligned_cols=50 Identities=14% Similarity=0.021 Sum_probs=43.3
Q ss_pred cHHHHHHHHHHHHHc--CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcCcH
Q 019734 252 SHRQARKWMKRAADC--GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGET 301 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~~~ 301 (336)
+.++|+......+.. .+......|-.++.-.|++++|..-++......+.
T Consensus 12 ~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~ 63 (273)
T 1zbp_A 12 QLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPE 63 (273)
T ss_dssp CHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGG
T ss_pred CHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCch
Confidence 899999999999986 55666678888888899999999999999988754
No 309
>3fap_B FRAP, FKBP12-rapamycin associated protein; complex, gene therapy, cell cycle; HET: ARD; 1.85A {Homo sapiens} SCOP: a.24.7.1 PDB: 2fap_B* 2rse_B 1nsg_B* 4fap_B* 1aue_A 2gaq_A 1fap_B*
Probab=25.91 E-value=1.4e+02 Score=20.60 Aligned_cols=18 Identities=22% Similarity=0.181 Sum_probs=8.8
Q ss_pred CCHHHHHHHHHHHHHcCC
Q 019734 119 KNLDKALDSFLKGAARGS 136 (336)
Q Consensus 119 ~~~~~A~~~~~~A~~~~~ 136 (336)
.++.+|..|.++-...++
T Consensus 58 ~~L~~A~~~~~~y~~t~~ 75 (94)
T 3fap_B 58 RDLMEAQEWCRKYMKSGN 75 (94)
T ss_dssp HHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 345555555555444443
No 310
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=22.88 E-value=2.5e+02 Score=22.39 Aligned_cols=48 Identities=17% Similarity=0.043 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHHHc----CCHHHHHHHHHHhhccCCHHHHHHHHHHHHHcC
Q 019734 252 SHRQARKWMKRAADC----GHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG 299 (336)
Q Consensus 252 ~~~~A~~~~~~a~~~----~~~~a~~~lg~~~~~~~~~~~A~~~~~~A~~~~ 299 (336)
+...+...|.-.... +.+..+...+..+...|++.+|...|++++...
T Consensus 94 ~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~ 145 (202)
T 3esl_A 94 NFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENN 145 (202)
T ss_dssp CHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
No 311
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=21.32 E-value=39 Score=23.13 Aligned_cols=15 Identities=20% Similarity=0.308 Sum_probs=11.6
Q ss_pred CCHHHHHHHHHHHHH
Q 019734 283 GEMMKAVVYLELATR 297 (336)
Q Consensus 283 ~~~~~A~~~~~~A~~ 297 (336)
|+.++|+.||++++.
T Consensus 33 G~k~~A~~~YkkGi~ 47 (89)
T 3eab_A 33 GQKEQAVEWYKKGIE 47 (89)
T ss_dssp SSGGGSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 778888888888764
No 312
>3ctd_A Putative ATPase, AAA family; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Prochlorococcus marinus subsp} SCOP: a.80.1.2
Probab=20.75 E-value=2.4e+02 Score=22.71 Aligned_cols=29 Identities=7% Similarity=-0.011 Sum_probs=15.7
Q ss_pred ccCHHHHHHHHHHHHHCCCHHHHHHHHHH
Q 019734 214 DFNLQEAARWYLRAAEGGYVRAMYNTSLC 242 (336)
Q Consensus 214 ~~~~~~A~~~~~~a~~~~~~~a~~~lg~~ 242 (336)
+.-...|...++.+-..|.+++...|+.+
T Consensus 88 P~Al~~a~aa~~a~~~iG~PE~~i~Laqa 116 (213)
T 3ctd_A 88 PNAIVVVQSCCDAFDRVGFPEGLFFLSQA 116 (213)
T ss_dssp TTHHHHHHHHHHHHHHHCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 34445555555555555666655555544
Done!