Your job contains 1 sequence.
>019740
MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI
EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSAIMDTHE
CQPLYLEIQEFYEGLNMKVEQQVPLLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQT
VTTVLRRPRIGAGYRLIDMITEPYRLIRRCEVTAILILYGLPRLLTGSILAHEMMHAWLR
LKGYPNLRPDVEEGICQVLAHMWLESEIYSGSGSDVASSSSSSASSSSSSPSSSSTSSKK
GKRSDFEKDLGKFFKHQIESDTSSAYGDGLGKVVRQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019740
(336 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2115290 - symbol:AT4G36860 species:3702 "Arabi... 1473 6.0e-151 1
TAIR|locus:2202175 - symbol:DA1 "DA1" species:3702 "Arabi... 1250 2.6e-127 1
TAIR|locus:2063932 - symbol:DAR2 "DA1-related protein 2" ... 1169 9.8e-119 1
TAIR|locus:2170338 - symbol:DAR4 "DA1-related protein 4" ... 883 2.5e-87 1
TAIR|locus:2154880 - symbol:DAR6 "DA1-related protein 6" ... 858 8.9e-86 1
TAIR|locus:2154890 - symbol:DAR5 "DA1-related protein 5" ... 817 2.0e-81 1
WB|WBGene00012379 - symbol:Y1A5A.1 species:6239 "Caenorha... 122 9.6e-06 1
UNIPROTKB|Q14192 - symbol:FHL2 "Four and a half LIM domai... 123 3.2e-05 1
ZFIN|ZDB-GENE-031219-1 - symbol:fhl1b "four and a half LI... 123 3.2e-05 1
ZFIN|ZDB-GENE-050522-56 - symbol:lims2 "LIM and senescent... 125 3.6e-05 1
UNIPROTKB|J3KNW4 - symbol:FHL2 "Four and a half LIM domai... 123 6.4e-05 1
ZFIN|ZDB-GENE-040808-49 - symbol:fhl2a "four and a half L... 120 7.1e-05 1
ZFIN|ZDB-GENE-040206-1 - symbol:fhl1a "four and a half LI... 121 8.3e-05 1
ZFIN|ZDB-GENE-041010-121 - symbol:fhl2b "four and a half ... 119 9.2e-05 1
ZFIN|ZDB-GENE-040822-3 - symbol:zgc:92375 "zgc:92375" spe... 118 0.00012 1
UNIPROTKB|F1SU18 - symbol:FHL2 "Uncharacterized protein" ... 117 0.00017 1
ZFIN|ZDB-GENE-060728-1 - symbol:lhx4 "LIM homeobox 4" spe... 119 0.00018 1
UNIPROTKB|F1MFM7 - symbol:LHX4 "Uncharacterized protein" ... 118 0.00023 1
UNIPROTKB|Q969G2 - symbol:LHX4 "LIM/homeobox protein Lhx4... 118 0.00023 1
MGI|MGI:101776 - symbol:Lhx4 "LIM homeobox protein 4" spe... 118 0.00023 1
UNIPROTKB|F1PCI5 - symbol:LHX4 "Uncharacterized protein" ... 118 0.00024 1
WB|WBGene00006407 - symbol:lim-9 species:6239 "Caenorhabd... 120 0.00030 1
UNIPROTKB|F1PU47 - symbol:FHL2 "Uncharacterized protein" ... 114 0.00035 1
MGI|MGI:1341092 - symbol:Fhl3 "four and a half LIM domain... 114 0.00037 1
UNIPROTKB|J9P1P8 - symbol:FHL5 "Uncharacterized protein" ... 113 0.00047 1
UNIPROTKB|Q5JXI0 - symbol:FHL1 "Four and a half LIM domai... 100 0.00048 1
UNIPROTKB|H9L2C7 - symbol:LHX4 "Uncharacterized protein" ... 111 0.00051 1
ZFIN|ZDB-GENE-030131-4741 - symbol:fhl3 "four and a half ... 112 0.00059 1
FB|FBgn0051624 - symbol:CG31624 species:7227 "Drosophila ... 106 0.00072 1
UNIPROTKB|F1S681 - symbol:LHX4 "Uncharacterized protein" ... 113 0.00077 1
RGD|1307180 - symbol:Fhl3 "four and a half LIM domains 3"... 111 0.00082 1
UNIPROTKB|G3V481 - symbol:AJUBA "LIM domain-containing pr... 91 0.00092 1
UNIPROTKB|G3V5F5 - symbol:AJUBA "LIM domain-containing pr... 91 0.00092 1
UNIPROTKB|E1C1I0 - symbol:FHL5 "Uncharacterized protein" ... 110 0.00099 1
>TAIR|locus:2115290 [details] [associations]
symbol:AT4G36860 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00142 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005886 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 EMBL:AL161590 GO:GO:0043130 EMBL:Z99708
HOGENOM:HOG000239946 InterPro:IPR022087 Pfam:PF12315 EMBL:AY062599
EMBL:AY114659 IPI:IPI00523439 PIR:C85435 RefSeq:NP_195404.6
UniGene:At.43898 HSSP:P25801 ProteinModelPortal:Q8W4F0 SMR:Q8W4F0
IntAct:Q8W4F0 PaxDb:Q8W4F0 PRIDE:Q8W4F0 EnsemblPlants:AT4G36860.1
GeneID:829839 KEGG:ath:AT4G36860 TAIR:At4g36860 eggNOG:NOG314122
OMA:CQPLYLE Genevestigator:Q8W4F0 Uniprot:Q8W4F0
Length = 553
Score = 1473 (523.6 bits), Expect = 6.0e-151, P = 6.0e-151
Identities = 269/329 (81%), Positives = 284/329 (86%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI 60
M WHPECF C++C+ PI D EFSMSGNRPYHK CYKEQHHPKCDVC NFIPTN AGLI
Sbjct: 206 MGGVWHPECFCCNACDKPIIDYEFSMSGNRPYHKLCYKEQHHPKCDVCHNFIPTNPAGLI 265
Query: 61 EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSAIMDTHE 120
EYRAHPFW+QKYCPSHERDGTPRCCSCERMEP+DTKYL LDDGRKLCLECLDSAIMDTHE
Sbjct: 266 EYRAHPFWMQKYCPSHERDGTPRCCSCERMEPKDTKYLILDDGRKLCLECLDSAIMDTHE 325
Query: 121 CQPLYLEIQEFYEGLNMKVEQQVPLLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQT 180
CQPLYLEI+EFYEGL+MKVEQQ+P+LLVER ALNEAMEGEK+GHHHLPETRGLCLSEEQT
Sbjct: 326 CQPLYLEIREFYEGLHMKVEQQIPMLLVERSALNEAMEGEKHGHHHLPETRGLCLSEEQT 385
Query: 181 VTTVLRRPRIGAGYRLIDMITEPYRLIRRCEVTAILILYGLPRLLTGSILAHEMMHAWLR 240
VTTVLRRPRIGAGY+LIDMITEP RLIRRCEVTAILILYGLPRLLTGSILAHEMMHAWLR
Sbjct: 386 VTTVLRRPRIGAGYKLIDMITEPCRLIRRCEVTAILILYGLPRLLTGSILAHEMMHAWLR 445
Query: 241 LKGYPNLRPDVEEGICQVLAHMWLESEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKK 300
L GYPNLRP+VEEGICQVLAHMWLESE Y KK
Sbjct: 446 LNGYPNLRPEVEEGICQVLAHMWLESETYAGSTLVDIASSSSSAVVSASS--------KK 497
Query: 301 GKRSDFEKDLGKFFKHQIESDTSSAYGDG 329
G+RSDFEK LG+FFKHQIESD+SSAYGDG
Sbjct: 498 GERSDFEKKLGEFFKHQIESDSSSAYGDG 526
>TAIR|locus:2202175 [details] [associations]
symbol:DA1 "DA1" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA;IPI]
[GO:0046621 "negative regulation of organ growth" evidence=IMP]
[GO:0048317 "seed morphogenesis" evidence=IMP] [GO:0048482 "ovule
morphogenesis" evidence=IMP] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00142 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
GO:GO:0046621 EMBL:AC069143 GO:GO:0043130 EMBL:BX816571
IPI:IPI00540867 PIR:D86326 RefSeq:NP_173361.1 UniGene:At.21826
ProteinModelPortal:P0C7Q8 SMR:P0C7Q8 STRING:P0C7Q8 PRIDE:P0C7Q8
EnsemblPlants:AT1G19270.1 GeneID:838510 KEGG:ath:AT1G19270
TAIR:At1g19270 eggNOG:NOG312886 HOGENOM:HOG000239946 OMA:YHPKCDV
PhylomeDB:P0C7Q8 ProtClustDB:CLSN2914207 Genevestigator:P0C7Q8
GO:GO:0048482 GO:GO:0048317 InterPro:IPR022087 Pfam:PF12315
Uniprot:P0C7Q8
Length = 532
Score = 1250 (445.1 bits), Expect = 2.6e-127, P = 2.6e-127
Identities = 224/329 (68%), Positives = 262/329 (79%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI 60
+ + WHPECFRC+ C+ PI++ EFS SGN P+HK CY+E++HPKCDVC +FIPTN AGLI
Sbjct: 188 LNSLWHPECFRCYGCSQPISEYEFSTSGNYPFHKACYRERYHPKCDVCSHFIPTNHAGLI 247
Query: 61 EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSAIMDTHE 120
EYRAHPFW+QKYCPSHE D TPRCCSCERMEPR+T+Y+ L+DGRKLCLECLDSA+MDT +
Sbjct: 248 EYRAHPFWVQKYCPSHEHDATPRCCSCERMEPRNTRYVELNDGRKLCLECLDSAVMDTMQ 307
Query: 121 CQPLYLEIQEFYEGLNMKVEQQVPLLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQT 180
CQPLYL+IQ FYEGLNMKVEQ+VPLLLVERQALNEA EGEKNGH+H+PETRGLCLSEEQT
Sbjct: 308 CQPLYLQIQNFYEGLNMKVEQEVPLLLVERQALNEAREGEKNGHYHMPETRGLCLSEEQT 367
Query: 181 VTTVLRRPRIGAGYRLIDMITEPYRLIRRCEVTAILILYGLPRLLTGSILAHEMMHAWLR 240
V+TV +R + G G + ITEPY+L R+CEVTAILIL+GLPRLLTGSILAHEMMHAW+R
Sbjct: 368 VSTVRKRSKHGTG-KWAGNITEPYKLTRQCEVTAILILFGLPRLLTGSILAHEMMHAWMR 426
Query: 241 LKGYPNLRPDVEEGICQVLAHMWLESEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKK 300
LKG+ L DVEEGICQV+AH WL++E+ KK
Sbjct: 427 LKGFRTLSQDVEEGICQVMAHKWLDAEL-----------AAGSTNSNAASSSSSSQGLKK 475
Query: 301 GKRSDFEKDLGKFFKHQIESDTSSAYGDG 329
G RS +E+ LG+FFKHQIESD S YGDG
Sbjct: 476 GPRSQYERKLGEFFKHQIESDASPVYGDG 504
>TAIR|locus:2063932 [details] [associations]
symbol:DAR2 "DA1-related protein 2" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010088 "phloem development" evidence=IMP] [GO:0048364 "root
development" evidence=IMP] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00142 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0048364 Gene3D:2.10.110.10 PROSITE:PS50330 GO:GO:0010088
GO:GO:0043130 EMBL:AC003000 HOGENOM:HOG000239946 InterPro:IPR022087
Pfam:PF12315 EMBL:AK227895 IPI:IPI00530198 PIR:T01013
RefSeq:NP_181513.3 UniGene:At.37124 ProteinModelPortal:Q0WSN2
SMR:Q0WSN2 PaxDb:Q0WSN2 PRIDE:Q0WSN2 EnsemblPlants:AT2G39830.1
GeneID:818570 KEGG:ath:AT2G39830 TAIR:At2g39830 eggNOG:NOG239417
InParanoid:Q0WSN2 OMA:CKHEIGH PhylomeDB:Q0WSN2
ProtClustDB:CLSN2702284 Genevestigator:Q0WSN2 Uniprot:Q0WSN2
Length = 528
Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
Identities = 209/329 (63%), Positives = 254/329 (77%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI 60
M F+HPECFRCHSC IT+ EFS+SG +PYHK C+KE HPKC+VC +FIPTN AGLI
Sbjct: 178 MGTFFHPECFRCHSCGYAITEHEFSLSGTKPYHKLCFKELTHPKCEVCHHFIPTNDAGLI 237
Query: 61 EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSAIMDTHE 120
EYR HPFW QKYCPSHE D T RCCSCER+E D +Y +L+DGR LCLEC+++AI DT E
Sbjct: 238 EYRCHPFWNQKYCPSHEYDKTARCCSCERLESWDVRYYTLEDGRSLCLECMETAITDTGE 297
Query: 121 CQPLYLEIQEFYEGLNMKVEQQVPLLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQT 180
CQPLY I+++YEG+ MK++QQ+P+LLV+R+ALN+A+ GEKNG+HH+PETRGLCLSEEQT
Sbjct: 298 CQPLYHAIRDYYEGMYMKLDQQIPMLLVQREALNDAIVGEKNGYHHMPETRGLCLSEEQT 357
Query: 181 VTTVLRRPRIGAGYRLIDMITEPYRLIRRCEVTAILILYGLPRLLTGSILAHEMMHAWLR 240
VT+VLRRPR+GA +RL+ M T+P RL R+CEVTAIL+LYGLPRLLTG+ILAHE+MH WLR
Sbjct: 358 VTSVLRRPRLGA-HRLVGMRTQPQRLTRKCEVTAILVLYGLPRLLTGAILAHELMHGWLR 416
Query: 241 LKGYPNLRPDVEEGICQVLAHMWLESEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKK 300
L G+ NL P+VEEGICQVL++MWLESE+ KK
Sbjct: 417 LNGFRNLNPEVEEGICQVLSYMWLESEVLSDPSTRNLPSTSSVATSSSSSFSN-----KK 471
Query: 301 GKRSDFEKDLGKFFKHQIESDTSSAYGDG 329
G +S+ EK LG+FFKHQI D S AYG G
Sbjct: 472 GGKSNVEKKLGEFFKHQIAHDASPAYGGG 500
>TAIR|locus:2170338 [details] [associations]
symbol:DAR4 "DA1-related protein 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0006952 "defense response" evidence=IEA;ISS;IMP] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009409 "response to cold"
evidence=IMP] [GO:0043531 "ADP binding" evidence=IEA] Pfam:PF00412
InterPro:IPR000767 InterPro:IPR001781 InterPro:IPR002182
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS00142 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0046872 GO:GO:0009409
GO:GO:0008270 GO:GO:0043531 Gene3D:2.10.110.10 EMBL:AB011480
InterPro:IPR022087 Pfam:PF12315 EMBL:AY079160 IPI:IPI00538116
RefSeq:NP_197291.2 UniGene:At.43401 ProteinModelPortal:Q9FKN7
SMR:Q9FKN7 STRING:Q9FKN7 PRIDE:Q9FKN7 EnsemblPlants:AT5G17890.1
GeneID:831657 KEGG:ath:AT5G17890 TAIR:At5g17890 eggNOG:NOG263350
HOGENOM:HOG000115011 InParanoid:Q9FKN8 OMA:VNIICEE PhylomeDB:Q9FKN7
Genevestigator:Q9FKN7 InterPro:IPR011713 Pfam:PF07725
Uniprot:Q9FKN7
Length = 1613
Score = 883 (315.9 bits), Expect = 2.5e-87, P = 2.5e-87
Identities = 175/333 (52%), Positives = 217/333 (65%)
Query: 5 WHPECFRCHSCNLPITDVEFS-MSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYR 63
WHP+CF C C PI E S + G YHK CYKE HP C VC+ IP + GL +Y
Sbjct: 1260 WHPQCFCCLRCREPIAMNEISDLRGM--YHKPCYKELRHPNCYVCEKKIPRTAEGL-KYH 1316
Query: 64 AHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSAIMDTHECQP 123
HPFW++ YCPSH+ DGTP+CCSCER+E T+Y+ L D R LC EC+DSAIMD+ ECQP
Sbjct: 1317 EHPFWMETYCPSHDGDGTPKCCSCERLEHCGTQYVMLADFRWLCRECMDSAIMDSDECQP 1376
Query: 124 LYLEIQEFYEGLNMKVEQQVPLLLVERQALNEAMEGEK---NGHHHLPETRGLCLSEEQT 180
L+ EI+EF+EGL+MK+E++ P+ LVE+ ALN+A + EK G L RG+CLSEEQ
Sbjct: 1377 LHFEIREFFEGLHMKIEEEFPVYLVEKNALNKAEKEEKIDKQGDQCLMVVRGICLSEEQI 1436
Query: 181 VTTVLRRPRIGAGYRLIDMITEPYRLIRRCEVTAILILYGLPRLLTGSILAHEMMHAWLR 240
VT+V + R +++D +TE R++R+CEVTAILILYGLPRLLTG ILAHEMMHA+LR
Sbjct: 1437 VTSVSQGVRRMLNKQILDTVTESQRVVRKCEVTAILILYGLPRLLTGYILAHEMMHAYLR 1496
Query: 241 LKGYPNLRPDVEEGICQVLAHMWLESEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKK 300
L GY NL +EEG+CQVL +MWLE + Y KK
Sbjct: 1497 LNGYRNLNMVLEEGLCQVLGYMWLECQTYVFDTATIASSSSSSRTPLSTTTS------KK 1550
Query: 301 GKRSDFEKDLGKFFKHQIESDTSSAYGDGLGKV 333
SDFEK L F KHQIE+D S +GDG KV
Sbjct: 1551 VDPSDFEKRLVNFCKHQIETDESPFFGDGFRKV 1583
>TAIR|locus:2154880 [details] [associations]
symbol:DAR6 "DA1-related protein 6" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00142 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 GO:GO:0043130 HOGENOM:HOG000239946
InterPro:IPR022087 Pfam:PF12315 EMBL:AB013389 IPI:IPI00527859
RefSeq:NP_201463.1 UniGene:At.55715 ProteinModelPortal:Q9FJX8
SMR:Q9FJX8 PaxDb:Q9FJX8 PRIDE:Q9FJX8 EnsemblPlants:AT5G66620.1
GeneID:836794 KEGG:ath:AT5G66620 TAIR:At5g66620 eggNOG:NOG257706
InParanoid:Q9FJX8 OMA:VQESLNM PhylomeDB:Q9FJX8
ProtClustDB:CLSN2686855 Genevestigator:Q9FJX8 Uniprot:Q9FJX8
Length = 644
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 167/332 (50%), Positives = 220/332 (66%)
Query: 5 WHPECFRCHSCNLPIT--DVEFSMSGNR-PYHKHCYKEQHHPKCDVCQNFIPTNSAGLIE 61
WHP CF C +C+ PI D+E +S +R +HK CY E++ C VC+ +
Sbjct: 306 WHPGCFCCRACHKPIAIHDIENHVSNSRGKFHKSCY-ERY---CYVCKE------KKMKT 355
Query: 62 YRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSAIMDTHEC 121
Y HPFW ++YCP HE DGTP+CCSCER+EPR++ Y+ L DGR LCLEC++SA+MD+ EC
Sbjct: 356 YNNHPFWEERYCPVHEADGTPKCCSCERLEPRESNYVMLADGRWLCLECMNSAVMDSDEC 415
Query: 122 QPLYLEIQEFYEGLNMKVEQQVPLLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTV 181
QPL+ ++++F+EGLNMK+E++ P LLVE+QALN+A + EK + + TRG+CLSEEQ V
Sbjct: 416 QPLHFDMRDFFEGLNMKIEKEFPFLLVEKQALNKAEKEEKIDYQYEVVTRGICLSEEQIV 475
Query: 182 TTVLRRPRIGAGYRLIDMITEPYRLIRRCEVTAILILYGLPRLLTGSILAHEMMHAWLRL 241
+V +RP G +L+ M TE ++ R CEVTAILILYGLPRLLTG ILAHEMMHA+LRL
Sbjct: 476 DSVSQRPVRGPNNKLVGMATESQKVTRECEVTAILILYGLPRLLTGYILAHEMMHAYLRL 535
Query: 242 KGYPNLRPDVEEGICQVLAHMWLESEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKG 301
G+ NL +EEGICQVL H+WL+S+ Y KKG
Sbjct: 536 NGHRNLNNILEEGICQVLGHLWLDSQTYATADATADASSSASSSSRTPPAASAS---KKG 592
Query: 302 KRSDFEKDLGKFFKHQIESDTSSAYGDGLGKV 333
+ SDF+K L +F K+QIE+D S YG G V
Sbjct: 593 EWSDFDKKLVEFCKNQIETDDSPVYGLGFRTV 624
>TAIR|locus:2154890 [details] [associations]
symbol:DAR5 "DA1-related protein 5" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR002182 Pfam:PF00931 PROSITE:PS00142
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 Pfam:PF05659
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0043531 Gene3D:2.10.110.10 InterPro:IPR008808 PROSITE:PS51153
EMBL:AB018119 HOGENOM:HOG000239946 InterPro:IPR022087 Pfam:PF12315
EMBL:AB013389 EMBL:BT003163 EMBL:AK227655 IPI:IPI00547750
RefSeq:NP_201464.2 UniGene:At.28858 ProteinModelPortal:Q84WJ0
SMR:Q84WJ0 PRIDE:Q84WJ0 EnsemblPlants:AT5G66630.1 GeneID:836795
KEGG:ath:AT5G66630 TAIR:At5g66630 eggNOG:KOG1703 InParanoid:Q84WJ0
OMA:LASTMER Genevestigator:Q84WJ0 Uniprot:Q84WJ0
Length = 702
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 164/332 (49%), Positives = 211/332 (63%)
Query: 5 WHPECFRCHSCNLPIT--DVEFSMSGNR-PYHKHCYKEQHHPKCDVCQNFIPTNSAGLIE 61
WHP CF C SC+ PI ++E +S +R +HK CY E++ C VC+ +
Sbjct: 367 WHPGCFCCRSCDKPIAIHELENHVSNSRGKFHKSCY-ERY---CYVCKE------KKMKT 416
Query: 62 YRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSAIMDTHEC 121
Y HPFW ++YCP HE DGTP+CCSCER+EPR TKY L DGR LCLEC SA MD+ EC
Sbjct: 417 YNIHPFWEERYCPVHEADGTPKCCSCERLEPRGTKYGKLSDGRWLCLECGKSA-MDSDEC 475
Query: 122 QPLYLEIQEFYEGLNMKVEQQVPLLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTV 181
QPLY ++++F+E LNMK+E++ PL+LV ++ LN+ + EK +H+ R C+SE++ +
Sbjct: 476 QPLYFDMRDFFESLNMKIEKEFPLILVRKELLNK--KEEKIDNHYEVLIRAYCMSEQKIM 533
Query: 182 TTVLRRPRIGAGYRLIDMITEPYRLIRRCEVTAILILYGLPRLLTGSILAHEMMHAWLRL 241
T V PR G +LIDM TEP ++ C+VTAILILYGLPRLLTG ILAHEMMHAWLRL
Sbjct: 534 TYVSEEPRTGQNKQLIDMDTEPQGVVHECKVTAILILYGLPRLLTGYILAHEMMHAWLRL 593
Query: 242 KGYPNLRPDVEEGICQVLAHMWLESEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKG 301
G+ NL +EEGICQVL H+WLES+ Y KKG
Sbjct: 594 NGHMNLNNILEEGICQVLGHLWLESQTYATADTTADAASASSSSSRTPPAASAS---KKG 650
Query: 302 KRSDFEKDLGKFFKHQIESDTSSAYGDGLGKV 333
+ SDF+K L +F K+QIE+D S YG G V
Sbjct: 651 EWSDFDKKLVEFCKNQIETDESPVYGLGFRTV 682
>WB|WBGene00012379 [details] [associations]
symbol:Y1A5A.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 eggNOG:NOG314122
GeneTree:ENSGT00690000101670 HSSP:P70662 EMBL:AL021177 PIR:T26544
RefSeq:NP_497801.1 ProteinModelPortal:Q9XXT7 SMR:Q9XXT7
STRING:Q9XXT7 EnsemblMetazoa:Y1A5A.1 GeneID:175515
KEGG:cel:CELE_Y1A5A.1 UCSC:Y1A5A.1 CTD:175515 WormBase:Y1A5A.1
HOGENOM:HOG000153885 InParanoid:Q9XXT7 OMA:KMDRSID NextBio:888484
Uniprot:Q9XXT7
Length = 192
Score = 122 (48.0 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 35/110 (31%), Positives = 47/110 (42%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI 60
M WHP+ F C SC PI F + N Y C+ ++++PKC C + L+
Sbjct: 82 MNRLWHPDHFTCSSCKRPIKQT-FQAADNHAYCVQCFAQKYNPKCAGCMETLVDTC--LL 138
Query: 61 EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLEC 110
H W H R T C SC R P YL +DD + L+C
Sbjct: 139 ALDRH--W-------HPRCFT--CSSCNRPLPNGEFYL-VDD-KPYDLDC 175
>UNIPROTKB|Q14192 [details] [associations]
symbol:FHL2 "Four and a half LIM domains protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0030018 "Z disc" evidence=IEA] [GO:0031430 "M
band" evidence=IEA] [GO:0055014 "atrial cardiac muscle cell
development" evidence=IEA] [GO:0055015 "ventricular cardiac muscle
cell development" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=NAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0050681 "androgen
receptor binding" evidence=NAS] [GO:0030521 "androgen receptor
signaling pathway" evidence=NAS] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005925
"focal adhesion" evidence=IDA] [GO:0015629 "actin cytoskeleton"
evidence=IDA] Pfam:PF00412 Reactome:REACT_111217 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0045893
GO:GO:0043066 GO:GO:0005654 GO:GO:0030521 GO:GO:0031430
GO:GO:0030018 GO:GO:0044281 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0044255 GO:GO:0006351 GO:GO:0005925
Orphanet:154 GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0003713
GO:GO:0009725 Pathway_Interaction_DB:hdac_classiii_pathway
Pathway_Interaction_DB:ar_pathway GO:GO:0001649 GO:GO:0050681
GO:GO:0055015 GO:GO:0060347 eggNOG:NOG314122 HOVERGEN:HBG074526
HOGENOM:HOG000231075 CTD:2274 KO:K14380 OrthoDB:EOG4XKV7B
GO:GO:0055014 EMBL:L42176 EMBL:U29332 EMBL:AB038794 EMBL:DQ307067
EMBL:BC014397 EMBL:U60117 IPI:IPI00743342 PIR:JC6565
RefSeq:NP_001034581.1 RefSeq:NP_001441.4 RefSeq:NP_963849.1
RefSeq:NP_963851.2 UniGene:Hs.443687 PDB:1X4K PDB:1X4L PDB:2D8Z
PDBsum:1X4K PDBsum:1X4L PDBsum:2D8Z ProteinModelPortal:Q14192
SMR:Q14192 DIP:DIP-5980N IntAct:Q14192 MINT:MINT-120725
STRING:Q14192 PhosphoSite:Q14192 DMDM:116241364 UCD-2DPAGE:Q14192
PaxDb:Q14192 PRIDE:Q14192 DNASU:2274 Ensembl:ENST00000322142
Ensembl:ENST00000358129 Ensembl:ENST00000393352
Ensembl:ENST00000393353 Ensembl:ENST00000408995
Ensembl:ENST00000409177 Ensembl:ENST00000409807 GeneID:2274
KEGG:hsa:2274 UCSC:uc002tct.3 GeneCards:GC02M105974 HGNC:HGNC:3703
HPA:CAB008368 HPA:HPA005922 HPA:HPA006028 MIM:602633
neXtProt:NX_Q14192 PharmGKB:PA164 InParanoid:Q14192 ChiTaRS:FHL2
EvolutionaryTrace:Q14192 GenomeRNAi:2274 NextBio:9247
ArrayExpress:Q14192 Bgee:Q14192 CleanEx:HS_FHL2
Genevestigator:Q14192 GermOnline:ENSG00000115641 Uniprot:Q14192
Length = 279
Score = 123 (48.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 34/106 (32%), Positives = 46/106 (43%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH CF CH C PI F N+ + CY++QH +C C+ I T G + YR
Sbjct: 122 WHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITT---GGVTYRE 178
Query: 65 HPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLEC 110
P W K C C +C R + ++ + DD CL C
Sbjct: 179 QP-W-HKECFV--------CTAC-RKQLSGQRFTARDDFA-YCLNC 212
Score = 110 (43.8 bits), Expect = 0.00099, P = 0.00099
Identities = 30/120 (25%), Positives = 46/120 (38%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH CF C C + D F+ ++ CY ++ KC C+ I + + EY+
Sbjct: 61 WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKM-EYKG 119
Query: 65 HPFWLQKYCPSHERDGTPRCCSCER-MEPRDTKYLSLDDGRKLCLECLDSA-IMDTHECQ 122
W HE C C R +P TK D + C+ C + M +C+
Sbjct: 120 SS-W-------HET-----CFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCK 166
>ZFIN|ZDB-GENE-031219-1 [details] [associations]
symbol:fhl1b "four and a half LIM domains 1b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-031219-1 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HSSP:Q05158 HOVERGEN:HBG074526 KO:K14365
EMBL:BC053279 IPI:IPI00481621 RefSeq:NP_954687.1 UniGene:Dr.84449
ProteinModelPortal:Q7T327 SMR:Q7T327 GeneID:387528 KEGG:dre:387528
CTD:387528 InParanoid:Q7T327 NextBio:20814152 ArrayExpress:Q7T327
Uniprot:Q7T327
Length = 280
Score = 123 (48.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 31/111 (27%), Positives = 50/111 (45%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH ECF+C+ C PI + F N Y C++++ +C C+ I T G + Y+
Sbjct: 122 WHDECFKCYQCQKPIGNKSFITKNNNVYCSPCHEKKFAKQCACCKKPITT---GGVNYQD 178
Query: 65 HPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSAI 115
P W H C SC R T++ S ++ + C++C S +
Sbjct: 179 QP-W-------HSECFV--CSSC-RKPLAGTRFTSHEE-KVYCVDCYKSTV 217
Score = 114 (45.2 bits), Expect = 0.00035, P = 0.00035
Identities = 24/71 (33%), Positives = 30/71 (42%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPT--NSAGLIEY 62
WH ECF C SC P+ F+ + Y CYK KC CQN I + ++ Y
Sbjct: 181 WHSECFVCSSCRKPLAGTRFTSHEEKVYCVDCYKSTVAKKCSGCQNPITGFGKATNVVNY 240
Query: 63 RAHPFWLQKYC 73
W YC
Sbjct: 241 EGGS-W-HDYC 249
>ZFIN|ZDB-GENE-050522-56 [details] [associations]
symbol:lims2 "LIM and senescent cell antigen-like
domains 2" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051896 "regulation of protein kinase B signaling
cascade" evidence=IMP] [GO:0060047 "heart contraction"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-050522-56 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0060047 GO:GO:0051896 HOGENOM:HOG000253950
HOVERGEN:HBG000053 InterPro:IPR017351 PIRSF:PIRSF038003 CTD:55679
EMBL:BC095708 IPI:IPI00491458 RefSeq:NP_001018506.1
UniGene:Dr.10610 ProteinModelPortal:Q502G3 SMR:Q502G3 GeneID:553696
KEGG:dre:553696 NextBio:20880427 ArrayExpress:Q502G3 Uniprot:Q502G3
Length = 377
Score = 125 (49.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 36/114 (31%), Positives = 46/114 (40%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCD--VCQNFIPTNSAG 58
M + WHP+CF C C + DV F SG RP + C+ Q VCQ +
Sbjct: 132 MNSSWHPDCFCCEVCEAVLADVGFVKSGGRPLCRSCHSRQKALSLGKHVCQKCLCVVEEP 191
Query: 59 LIEYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLD 112
L+ YR+ P Y P H C C + D + L G CL C D
Sbjct: 192 LM-YRSDP-----YHPDHFN-----CSHCGKELTADARELK---GELYCLPCHD 231
>UNIPROTKB|J3KNW4 [details] [associations]
symbol:FHL2 "Four and a half LIM domains protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:AC012360 OMA:QECKKTI HGNC:HGNC:3703
ChiTaRS:FHL2 EMBL:AC068273 EMBL:AC108058 ProteinModelPortal:J3KNW4
Ensembl:ENST00000344213 Uniprot:J3KNW4
Length = 389
Score = 123 (48.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 34/106 (32%), Positives = 46/106 (43%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH CF CH C PI F N+ + CY++QH +C C+ I T G + YR
Sbjct: 232 WHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITT---GGVTYRE 288
Query: 65 HPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLEC 110
P W K C C +C R + ++ + DD CL C
Sbjct: 289 QP-W-HKECFV--------CTAC-RKQLSGQRFTARDDFA-YCLNC 322
>ZFIN|ZDB-GENE-040808-49 [details] [associations]
symbol:fhl2a "four and a half LIM domains 2a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-040808-49 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:BX842683 HOVERGEN:HBG074526
GeneTree:ENSGT00690000101670 KO:K14380 OMA:QECKKTI EMBL:CR318643
EMBL:BC078393 IPI:IPI00482982 RefSeq:NP_001003732.1
UniGene:Dr.88679 SMR:Q6AZB7 Ensembl:ENSDART00000061577
GeneID:445277 KEGG:dre:445277 CTD:445277 InParanoid:Q6AZB7
NextBio:20832023 Uniprot:Q6AZB7
Length = 279
Score = 120 (47.3 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 32/123 (26%), Positives = 50/123 (40%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH +CF C C + D FS + CY ++ KC C+ I S + E++
Sbjct: 61 WHEDCFHCFQCKRSLVDKPFSTKDEQLLCTECYSNEYSSKCHECKKTIMPGSRKM-EHKG 119
Query: 65 HPFWLQKYCPSHERDGTPRCCSCER-MEPRDTKYLSLDDGRKLCLECLDS--AIMDTHEC 121
+ W HE C +C+R +P TK D C+ C + A+ H
Sbjct: 120 NS-W-------HET-----CFTCQRCQQPIGTKSFIPKDNHNYCVPCYEKQFAMQCVHCK 166
Query: 122 QPL 124
+P+
Sbjct: 167 KPI 169
>ZFIN|ZDB-GENE-040206-1 [details] [associations]
symbol:fhl1a "four and a half LIM domains 1a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-040206-1 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00690000101670 EMBL:BX511227
IPI:IPI00497720 Ensembl:ENSDART00000131056 Bgee:F1QYK5
Uniprot:F1QYK5
Length = 340
Score = 121 (47.7 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 25/71 (35%), Positives = 33/71 (46%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAG--LIEY 62
WH ECF CH+C P+ F+ ++ Y CYK KC CQN I G ++ Y
Sbjct: 241 WHSECFVCHTCKKPLAGARFTAHEDQFYCVDCYKSDVAKKCSGCQNPITGFGRGTNVVNY 300
Query: 63 RAHPFWLQKYC 73
W +YC
Sbjct: 301 EDKS-W-HEYC 309
>ZFIN|ZDB-GENE-041010-121 [details] [associations]
symbol:fhl2b "four and a half LIM domains 2b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-041010-121 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HOVERGEN:HBG074526 EMBL:BC083393 IPI:IPI01027906
UniGene:Dr.152492 ProteinModelPortal:Q5XJB1 SMR:Q5XJB1
InParanoid:Q5XJB1 Uniprot:Q5XJB1
Length = 279
Score = 119 (46.9 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 29/109 (26%), Positives = 46/109 (42%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH +CF C C+ + D FS + CY ++ KC C+ I S + E++
Sbjct: 61 WHDDCFHCFKCHRSLVDKPFSTKDEQLLCTECYSNEYSSKCFECKKTIMPGSRKM-EHKG 119
Query: 65 HPFWLQKYCPSHERDGTPRCCSCER-MEPRDTKYLSLDDGRKLCLECLD 112
+ W HE C +C+R +P TK +D C+ C +
Sbjct: 120 NS-W-------HET-----CFTCQRCQQPIGTKSFIPEDNSNYCVPCYE 155
>ZFIN|ZDB-GENE-040822-3 [details] [associations]
symbol:zgc:92375 "zgc:92375" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-040822-3 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 eggNOG:NOG314122
HOVERGEN:HBG074526 GeneTree:ENSGT00690000101670
HOGENOM:HOG000231075 KO:K14380 EMBL:CU928217 EMBL:BC079524
IPI:IPI00485856 RefSeq:NP_001004112.1 UniGene:Dr.34223 SMR:Q68FN5
Ensembl:ENSDART00000010496 GeneID:445475 KEGG:dre:445475
InParanoid:Q68FN5 OMA:ERQWHSE OrthoDB:EOG4H4646 NextBio:20832144
Uniprot:Q68FN5
Length = 280
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 29/118 (24%), Positives = 46/118 (38%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH CF+C C+ + D F+ CY ++ KC C+ + S + EY+
Sbjct: 62 WHENCFKCAKCSRSLVDKPFAAKDELMLCTECYSHEYSSKCSTCKKTVMPGSRKM-EYKG 120
Query: 65 HPFWLQKYCPSHERDGTPRCCSCER-MEPRDTKYLSLDDGRKLCLECLDSAIMDTHEC 121
+ W HE C C+R +P TK D C+ C + ++C
Sbjct: 121 NS-W-------HET-----CFLCQRCQQPIGTKSFIPKDNNYFCVPCFEKQF--AYQC 163
>UNIPROTKB|F1SU18 [details] [associations]
symbol:FHL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IEA] [GO:0055014 "atrial cardiac muscle cell development"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005925 "focal adhesion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0043066 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0005925 GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0009725
GO:GO:0001649 GO:GO:0055015 GO:GO:0060347
GeneTree:ENSGT00690000101670 GO:GO:0055014 EMBL:FP102429
Ensembl:ENSSSCT00000008924 OMA:DYHKKFS Uniprot:F1SU18
Length = 287
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 28/109 (25%), Positives = 45/109 (41%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH CF C C + D F+ ++ CY +++ +C C+ I + + EY+
Sbjct: 67 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKM-EYKG 125
Query: 65 HPFWLQKYCPSHERDGTPRCCSCER-MEPRDTKYLSLDDGRKLCLECLD 112
W HE C +C R +P TK DG+ C+ C +
Sbjct: 126 SS-W-------HET-----CFTCHRCQQPIGTKSFIPKDGQNFCVPCYE 161
Score = 115 (45.5 bits), Expect = 0.00028, P = 0.00028
Identities = 23/64 (35%), Positives = 30/64 (46%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH CF CH C PI F + + CY++QH +C C+ P S G + YR
Sbjct: 128 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKK--PITSGG-VTYRE 184
Query: 65 HPFW 68
P W
Sbjct: 185 QP-W 187
>ZFIN|ZDB-GENE-060728-1 [details] [associations]
symbol:lhx4 "LIM homeobox 4" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-060728-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 KO:K09374 HOVERGEN:HBG006263 CTD:89884
OMA:LSFRDDQ EMBL:BX294388 EMBL:CR381643 EMBL:CT025732
IPI:IPI00616255 RefSeq:NP_001116445.1 UniGene:Dr.92005
Ensembl:ENSDART00000057644 GeneID:571943 KEGG:dre:571943
NextBio:20890768 Uniprot:B0S5S7
Length = 391
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 30/114 (26%), Positives = 51/114 (44%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI 60
++ WH +C +C C+ + D FS +GN Y K + ++ KC CQ IP +
Sbjct: 49 LDRHWHSKCLKCADCHALLADKCFSRAGN-VYCKEDFFKRFGTKCASCQQGIPPTQ---V 104
Query: 61 EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSA 114
+A F +C + C C R ++ ++DGR +C E ++A
Sbjct: 105 VRKAQDFVYHLHCFA--------CVMCSRQLATGDEFYLMEDGRLVCKEDYETA 150
>UNIPROTKB|F1MFM7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021526
CTD:89884 OMA:LSFRDDQ EMBL:DAAA02043487 EMBL:DAAA02043488
EMBL:DAAA02043489 EMBL:DAAA02043490 IPI:IPI00695061
RefSeq:NP_001179714.1 UniGene:Bt.60930 Ensembl:ENSBTAT00000005216
GeneID:540797 KEGG:bta:540797 NextBio:20878839 Uniprot:F1MFM7
Length = 390
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI 60
++ WH C +C C + + D FS +G+ Y K + ++ KC CQ IP +
Sbjct: 46 LDRHWHSSCLKCADCQMQLADRCFSRAGS-VYCKEDFFKRFGTKCTACQQGIPPTQ---V 101
Query: 61 EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSA 114
+A F +C + C C R ++ ++DGR +C E ++A
Sbjct: 102 VRKAQDFVYHLHCFA--------CIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
>UNIPROTKB|Q969G2 [details] [associations]
symbol:LHX4 "LIM/homeobox protein Lhx4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 EMBL:AL139141 Orphanet:226307
Orphanet:95496 eggNOG:NOG275246 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0 GO:GO:0021526 EMBL:AY053457
EMBL:AF179849 EMBL:AF405430 EMBL:AF405425 EMBL:AF405426
EMBL:AF405427 EMBL:AF405428 EMBL:AF405429 EMBL:BC011759
EMBL:AB055703 EMBL:AB037683 EMBL:AF282899 EMBL:AH011598
IPI:IPI00169275 RefSeq:NP_203129.1 UniGene:Hs.658487
ProteinModelPortal:Q969G2 SMR:Q969G2 IntAct:Q969G2 STRING:Q969G2
DMDM:209572644 PRIDE:Q969G2 DNASU:89884 Ensembl:ENST00000263726
GeneID:89884 KEGG:hsa:89884 UCSC:uc001goe.2 CTD:89884
GeneCards:GC01P180199 HGNC:HGNC:21734 MIM:262700 MIM:602146
neXtProt:NX_Q969G2 Orphanet:85442 PharmGKB:PA134962876
InParanoid:Q969G2 OMA:LSFRDDQ PhylomeDB:Q969G2 GenomeRNAi:89884
NextBio:76401 ArrayExpress:Q969G2 Bgee:Q969G2 CleanEx:HS_LHX4
Genevestigator:Q969G2 GermOnline:ENSG00000121454 Uniprot:Q969G2
Length = 390
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI 60
++ WH C +C C + + D FS +G+ Y K + ++ KC CQ IP +
Sbjct: 46 LDRHWHSSCLKCADCQMQLADRCFSRAGS-VYCKEDFFKRFGTKCTACQQGIPPTQ---V 101
Query: 61 EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSA 114
+A F +C + C C R ++ ++DGR +C E ++A
Sbjct: 102 VRKAQDFVYHLHCFA--------CIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
>MGI|MGI:101776 [details] [associations]
symbol:Lhx4 "LIM homeobox protein 4" species:10090 "Mus
musculus" [GO:0001890 "placenta development" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101776 GO:GO:0005634 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 PDB:3MMK PDBsum:3MMK HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0
GO:GO:0021526 CTD:89884 OMA:LSFRDDQ EMBL:BC049834 EMBL:AF135415
EMBL:U89343 EMBL:S71659 IPI:IPI00134772 PIR:S46332
RefSeq:NP_034842.2 UniGene:Mm.103624 UniGene:Mm.351266
ProteinModelPortal:P53776 SMR:P53776 STRING:P53776 PRIDE:P53776
Ensembl:ENSMUST00000027740 GeneID:16872 KEGG:mmu:16872
UCSC:uc007dbn.2 InParanoid:P53776 NextBio:290842 Bgee:P53776
CleanEx:MM_LHX4 Genevestigator:P53776 GermOnline:ENSMUSG00000026468
Uniprot:P53776
Length = 390
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI 60
++ WH C +C C + + D FS +G+ Y K + ++ KC CQ IP +
Sbjct: 46 LDRHWHSSCLKCADCQMQLADRCFSRAGS-VYCKEDFFKRFGTKCTACQQGIPPTQ---V 101
Query: 61 EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSA 114
+A F +C + C C R ++ ++DGR +C E ++A
Sbjct: 102 VRKAQDFVYHLHCFA--------CIICNRQLATGDEFYLMEDGRLVCKEDYETA 147
>UNIPROTKB|F1PCI5 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 GeneTree:ENSGT00700000104177
GO:GO:0021526 OMA:LSFRDDQ EMBL:AAEX03005118 EMBL:AAEX03005119
Ensembl:ENSCAFT00000031328 Uniprot:F1PCI5
Length = 395
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI 60
++ WH C +C C + + D FS +G+ Y K + ++ KC CQ IP +
Sbjct: 51 LDRHWHSSCLKCADCQMQLADRCFSRAGS-VYCKEDFFKRFGTKCTACQQGIPPTQ---V 106
Query: 61 EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSA 114
+A F +C + C C R ++ ++DGR +C E ++A
Sbjct: 107 VRKAQDFVYHLHCFA--------CIICNRQLATGDEFYLMEDGRLVCKEDYETA 152
>WB|WBGene00006407 [details] [associations]
symbol:lim-9 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0071688 "striated
muscle myosin thick filament assembly" evidence=IMP] [GO:0031430 "M
band" evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001781 InterPro:IPR010442 Pfam:PF06297
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51303 SMART:SM00132
GO:GO:0031430 GO:GO:0046872 GO:GO:0008270 GO:GO:0071688
Gene3D:2.10.110.10 EMBL:Z81068 GeneTree:ENSGT00690000101670
EMBL:Z92780 UniGene:Cel.5046 GeneID:3565712 KEGG:cel:CELE_F25H5.1
CTD:3565712 NextBio:957561 EMBL:EF443133 RefSeq:NP_001021410.2
ProteinModelPortal:G5EF39 SMR:G5EF39 PRIDE:G5EF39
EnsemblMetazoa:F25H5.1f WormBase:F25H5.1f OMA:GACSRER
Uniprot:G5EF39
Length = 656
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 30/129 (23%), Positives = 56/129 (43%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WHP CF C +C + D+ + + N+ Y + Y E H P+C C I AG
Sbjct: 311 WHPACFTCQACEQLLVDLTYCVKDNQIYCERHYAELHKPRCSACDELI---FAGEYTKAM 367
Query: 65 HPFW-LQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSAIMDT-HEC- 121
+ W +C C C++ +Y+ D+ + C++C + + EC
Sbjct: 368 NKDWHSDHFC----------CWQCDQTLTGQ-RYIMRDE-QPYCIKCYEDVFANQCDECA 415
Query: 122 QPLYLEIQE 130
+P+ ++ ++
Sbjct: 416 KPIGIDSKD 424
>UNIPROTKB|F1PU47 [details] [associations]
symbol:FHL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060347 "heart trabecula formation"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0055014 "atrial cardiac muscle cell
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0043066 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0005925 GO:GO:0000122 Gene3D:2.10.110.10
GO:GO:0009725 GO:GO:0001649 GO:GO:0055015 GO:GO:0060347
GeneTree:ENSGT00690000101670 CTD:2274 KO:K14380 OMA:QECKKTI
GO:GO:0055014 EMBL:AAEX03007414 RefSeq:XP_531773.3
Ensembl:ENSCAFT00000003334 GeneID:474544 KEGG:cfa:474544
Uniprot:F1PU47
Length = 279
Score = 114 (45.2 bits), Expect = 0.00035, P = 0.00035
Identities = 31/109 (28%), Positives = 47/109 (43%)
Query: 2 EAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIE 61
++ WH CF CH C PI F N+ + CY++Q+ +C C+ I T G +
Sbjct: 119 DSSWHETCFTCHRCQQPIGTKSFIPKDNQNFCVPCYEKQYALQCVQCKKPITT---GGVT 175
Query: 62 YRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLEC 110
YR P W + C C +C++ P + + D CL C
Sbjct: 176 YREQP-W-HRECFV--------CTACKK--PLSGQRFTSRDEFAYCLSC 212
>MGI|MGI:1341092 [details] [associations]
symbol:Fhl3 "four and a half LIM domains 3" species:10090
"Mus musculus" [GO:0001725 "stress fiber" evidence=IDA] [GO:0003779
"actin binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030018 "Z disc"
evidence=IDA] [GO:0030036 "actin cytoskeleton organization"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 MGI:MGI:1341092 GO:GO:0005634 GO:GO:0003779
GO:GO:0030018 GO:GO:0046872 GO:GO:0030036 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0001725 eggNOG:NOG314122
HOVERGEN:HBG074526 GeneTree:ENSGT00690000101670
HOGENOM:HOG000231075 CTD:2275 OMA:QFTSRDD EMBL:AF134772
EMBL:AF114382 EMBL:AL606907 EMBL:BC144903 EMBL:BC145939
EMBL:AF149826 IPI:IPI00345772 IPI:IPI00828338 RefSeq:NP_034343.2
UniGene:Mm.331856 ProteinModelPortal:Q9R059 MINT:MINT-4788495
STRING:Q9R059 PhosphoSite:Q9R059 PaxDb:Q9R059 PRIDE:Q9R059
Ensembl:ENSMUST00000038684 GeneID:14201 KEGG:mmu:14201
InParanoid:Q9R059 NextBio:285438 CleanEx:MM_FHL3
Genevestigator:Q9R059 GermOnline:ENSMUSG00000032643 Uniprot:Q9R059
Length = 289
Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
Identities = 31/107 (28%), Positives = 40/107 (37%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH EC C C P+ +F+ + PY C+ E PKC C+ I S G
Sbjct: 181 WHRECLVCTGCKTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPITGGSGG---GEG 237
Query: 65 HPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRK-LCLEC 110
KY +R C SC R + DG + LC C
Sbjct: 238 AGLGGGKYVSFEDRHWHHSCFSCARCSTSLVGQGFVPDGDQVLCQGC 284
>UNIPROTKB|J9P1P8 [details] [associations]
symbol:FHL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 CTD:9457 OMA:YCVSCYD EMBL:AAEX03008544
EMBL:AAEX03008543 RefSeq:XP_532237.2 Ensembl:ENSCAFT00000048581
GeneID:475000 KEGG:cfa:475000 Uniprot:J9P1P8
Length = 284
Score = 113 (44.8 bits), Expect = 0.00047, P = 0.00047
Identities = 32/118 (27%), Positives = 45/118 (38%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH CF C CN + + F+ R CY + KC C+ I S + E++
Sbjct: 62 WHEGCFNCAKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKKTIMPGSRKM-EFKG 120
Query: 65 HPFWLQKYCPSHERDGTPRCCSCERM-EPRDTKYLSLDDGRKLCLECLDSAIMDTHEC 121
+ +W HE C CE +P TK L D C+ C + H C
Sbjct: 121 N-YW-------HET-----CFVCEHCRQPIGTKPLISKDNGNYCVPCFEKEF--AHYC 163
>UNIPROTKB|Q5JXI0 [details] [associations]
symbol:FHL1 "Four and a half LIM domains protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
EMBL:AL078638 UniGene:Hs.435369 HGNC:HGNC:3702 HOVERGEN:HBG074526
ChiTaRS:FHL1 HOGENOM:HOG000231075 IPI:IPI00639828 SMR:Q5JXI0
STRING:Q5JXI0 Ensembl:ENST00000449474 Uniprot:Q5JXI0
Length = 141
Score = 100 (40.3 bits), Expect = 0.00048, P = 0.00048
Identities = 22/70 (31%), Positives = 28/70 (40%)
Query: 4 FWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYR 63
FWH CFRC C P+ + F N+ C + PKC C I +EY+
Sbjct: 60 FWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQN-VEYK 118
Query: 64 AHPFWLQKYC 73
W K C
Sbjct: 119 G-TVW-HKDC 126
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 111 (44.1 bits), Expect = 0.00051, P = 0.00051
Identities = 27/114 (23%), Positives = 50/114 (43%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI 60
++ WH C +C C + + + F+ +G+ Y K + ++ KC CQ IP +
Sbjct: 21 LDRHWHSSCLKCADCQMQLAERCFARAGS-VYCKEDFFKRFGTKCTACQQGIPPTQ---V 76
Query: 61 EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSA 114
+A F +C + C C R ++ ++DGR +C E ++A
Sbjct: 77 VRKAQDFVYHLHCFA--------CIICSRQLATGDEFYLMEDGRLVCKEDYETA 122
>ZFIN|ZDB-GENE-030131-4741 [details] [associations]
symbol:fhl3 "four and a half LIM domains 3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-030131-4741 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00690000101670 CTD:2275
EMBL:BX511161 EMBL:BX530064 IPI:IPI00502722 RefSeq:XP_695478.2
UniGene:Dr.155754 UniGene:Dr.80073 Ensembl:ENSDART00000050173
Ensembl:ENSDART00000143757 GeneID:567097 KEGG:dre:567097
NextBio:20888522 Uniprot:E7EZP9
Length = 279
Score = 112 (44.5 bits), Expect = 0.00059, P = 0.00059
Identities = 31/106 (29%), Positives = 46/106 (43%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH CF C+SC PI F + Y CY+ + P+C C+ + + G + YR
Sbjct: 122 WHEGCFICNSCQQPIGSKSFIPDKDDHYCVPCYENKFAPRCTRCKQAL---AKGGVTYRD 178
Query: 65 HPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLEC 110
P W K C C SC +++ + S DD C++C
Sbjct: 179 EP-W-HKECFV--------CTSC-KVQLAGQHFTSRDDS-PYCIKC 212
>FB|FBgn0051624 [details] [associations]
symbol:CG31624 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 FlyBase:FBgn0051624
EMBL:BT015299 ProteinModelPortal:Q6AWE9 SMR:Q6AWE9 STRING:Q6AWE9
PRIDE:Q6AWE9 InParanoid:Q6AWE9 ArrayExpress:Q6AWE9 Bgee:Q6AWE9
Uniprot:Q6AWE9
Length = 178
Score = 106 (42.4 bits), Expect = 0.00072, P = 0.00072
Identities = 27/89 (30%), Positives = 37/89 (41%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WHPE F CH C+ I D F++ P C+ E++ C C+ I + + R
Sbjct: 26 WHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCKKPILEKTICAMGERW 85
Query: 65 HP--FWLQKYCPS-------HERDGTPRC 84
H F C +ERDG P C
Sbjct: 86 HEACFCCGGACKKPLASQTFYERDGKPYC 114
>UNIPROTKB|F1S681 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 GO:GO:0021526
OMA:LSFRDDQ EMBL:CU855640 EMBL:FP476046 Ensembl:ENSSSCT00000016925
Uniprot:F1S681
Length = 369
Score = 113 (44.8 bits), Expect = 0.00077, P = 0.00077
Identities = 29/114 (25%), Positives = 49/114 (42%)
Query: 1 MEAFWHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLI 60
++ WH C +C C + + D FS +G+ Y K + ++ KC CQ IP +
Sbjct: 25 LDRHWHSSCLKCADCQMQLADRCFSRAGS-VYCKEDFFKRFGTKCTACQQGIPPTQ---V 80
Query: 61 EYRAHPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRKLCLECLDSA 114
+A F C + C C R ++ ++DGR +C E ++A
Sbjct: 81 VRKAQDFVYHLPCFA--------CIICNRQLATGDEFYLMEDGRLVCKEDYETA 126
>RGD|1307180 [details] [associations]
symbol:Fhl3 "four and a half LIM domains 3" species:10116
"Rattus norvegicus" [GO:0001725 "stress fiber" evidence=IEA;ISO]
[GO:0003779 "actin binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA;ISO] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA;ISO] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1307180 GO:GO:0005634 GO:GO:0030018 GO:GO:0046872 GO:GO:0030036
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0001725 EMBL:CH473968
GeneTree:ENSGT00690000101670 CTD:2275 OMA:QFTSRDD OrthoDB:EOG46144B
IPI:IPI00191454 RefSeq:NP_001101449.1 UniGene:Rn.229136
Ensembl:ENSRNOT00000010007 GeneID:313582 KEGG:rno:313582
UCSC:RGD:1307180 NextBio:666470 Uniprot:D3ZPF0
Length = 288
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 31/107 (28%), Positives = 41/107 (38%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH EC C C P+ +F+ + PY C+ E PKC C+ I T +G
Sbjct: 181 WHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPI-TGGSGS---EG 236
Query: 65 HPFWLQKYCPSHERDGTPRCCSCERMEPRDTKYLSLDDGRK-LCLEC 110
KY +R C SC R + DG + LC C
Sbjct: 237 AGLGGGKYVSFEDRHWHHSCFSCARCSTSLVGQGFVPDGDQVLCQGC 283
>UNIPROTKB|G3V481 [details] [associations]
symbol:AJUBA "LIM domain-containing protein ajuba"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0016339 "calcium-dependent cell-cell
adhesion" evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA]
[GO:0030032 "lamellipodium assembly" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0031328 "positive
regulation of cellular biosynthetic process" evidence=IEA]
[GO:0033673 "negative regulation of kinase activity" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0035313 "wound healing, spreading of epidermal cells"
evidence=IEA] [GO:0043087 "regulation of GTPase activity"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043406 "positive
regulation of MAP kinase activity" evidence=IEA] [GO:0045294
"alpha-catenin binding" evidence=IEA] [GO:0046474
"glycerophospholipid biosynthetic process" evidence=IEA]
[GO:0048041 "focal adhesion assembly" evidence=IEA] [GO:0051015
"actin filament binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS50023 GO:GO:0005829 GO:GO:0003714
GO:GO:0034613 GO:GO:0043406 GO:GO:0043123 GO:GO:0008270
GO:GO:0003682 GO:GO:0005911 GO:GO:0005925 GO:GO:0030027
GO:GO:0005667 GO:GO:0000122 GO:GO:0030334 Gene3D:2.10.110.10
EMBL:AL132780 GO:GO:0048041 GO:GO:0035313 GO:GO:0016339
GO:GO:0046474 GO:GO:0030032 GO:GO:0033673 GO:GO:0031328
GO:GO:0043087 HGNC:HGNC:20250 ChiTaRS:AJUBA SMR:G3V481
Ensembl:ENST00000553592 Ensembl:ENST00000556731 Uniprot:G3V481
Length = 80
Score = 91 (37.1 bits), Expect = 0.00092, P = 0.00092
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 WHPECFRCHSCNLPITDVEFSMS-GNRPYHKHCYKEQHHPKCDVC-QNFIPT 54
+HP CFRC CN + + F++ N+ Y Y + + PKC C Q +P+
Sbjct: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPS 56
>UNIPROTKB|G3V5F5 [details] [associations]
symbol:AJUBA "LIM domain-containing protein ajuba"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0016339 "calcium-dependent cell-cell
adhesion" evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA]
[GO:0030032 "lamellipodium assembly" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0031328 "positive
regulation of cellular biosynthetic process" evidence=IEA]
[GO:0033673 "negative regulation of kinase activity" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0035313 "wound healing, spreading of epidermal cells"
evidence=IEA] [GO:0043087 "regulation of GTPase activity"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043406 "positive
regulation of MAP kinase activity" evidence=IEA] [GO:0045294
"alpha-catenin binding" evidence=IEA] [GO:0046474
"glycerophospholipid biosynthetic process" evidence=IEA]
[GO:0048041 "focal adhesion assembly" evidence=IEA] [GO:0051015
"actin filament binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS50023 GO:GO:0005829 GO:GO:0003714
GO:GO:0034613 GO:GO:0043406 GO:GO:0043123 GO:GO:0008270
GO:GO:0003682 GO:GO:0005911 GO:GO:0005925 GO:GO:0030027
GO:GO:0005667 GO:GO:0000122 GO:GO:0030334 Gene3D:2.10.110.10
EMBL:AL132780 GO:GO:0048041 GO:GO:0035313 GO:GO:0016339
GO:GO:0046474 GO:GO:0030032 GO:GO:0033673 GO:GO:0031328
GO:GO:0043087 HGNC:HGNC:20250 ChiTaRS:AJUBA
ProteinModelPortal:G3V5F5 SMR:G3V5F5 Ensembl:ENST00000553911
ArrayExpress:G3V5F5 Bgee:G3V5F5 Uniprot:G3V5F5
Length = 65
Score = 91 (37.1 bits), Expect = 0.00092, P = 0.00092
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 WHPECFRCHSCNLPITDVEFSMS-GNRPYHKHCYKEQHHPKCDVC-QNFIPT 54
+HP CFRC CN + + F++ N+ Y Y + + PKC C Q +P+
Sbjct: 5 YHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPS 56
>UNIPROTKB|E1C1I0 [details] [associations]
symbol:FHL5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0003713
GeneTree:ENSGT00690000101670 CTD:9457 OMA:YCVSCYD EMBL:AADN02002284
IPI:IPI00574285 RefSeq:XP_419829.1 UniGene:Gga.10208
Ensembl:ENSGALT00000025106 GeneID:421803 KEGG:gga:421803
NextBio:20824519 Uniprot:E1C1I0
Length = 279
Score = 110 (43.8 bits), Expect = 0.00099, P = 0.00099
Identities = 30/118 (25%), Positives = 44/118 (37%)
Query: 5 WHPECFRCHSCNLPITDVEFSMSGNRPYHKHCYKEQHHPKCDVCQNFIPTNSAGLIEYRA 64
WH CF+C C+ + + F+ CY ++ KC CQ I S + E++
Sbjct: 62 WHERCFKCTKCSRSLVEKPFAAKDELLLCTECYSNEYSSKCFHCQKTIMPGSRKM-EFKG 120
Query: 65 HPFWLQKYCPSHERDGTPRCCSCER-MEPRDTKYLSLDDGRKLCLECLDSAIMDTHEC 121
W HE C C+ +P TK L D C+ C + H C
Sbjct: 121 SS-W-------HES-----CFVCQYCQQPLGTKPLITKDNENYCVPCFEKQF--AHRC 163
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.450 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 336 307 0.0010 115 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 608 (65 KB)
Total size of DFA: 255 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.30u 0.11s 24.41t Elapsed: 00:00:01
Total cpu time: 24.31u 0.11s 24.42t Elapsed: 00:00:01
Start: Fri May 10 04:50:16 2013 End: Fri May 10 04:50:17 2013