Query 019741
Match_columns 336
No_of_seqs 187 out of 367
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 06:25:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019741.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019741hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v8t_A Manganese-containing ps 73.1 1.7 5.8E-05 41.6 2.6 129 163-312 26-191 (302)
2 1o9i_A Pseudocatalase; oxidore 60.8 4.3 0.00015 38.1 2.6 124 163-312 25-184 (266)
3 3k6c_A Uncharacterized protein 58.5 7.3 0.00025 31.8 3.3 36 255-311 30-65 (95)
4 2hz8_A De novo designed DIIRON 55.3 6.3 0.00021 33.1 2.4 32 289-323 57-88 (115)
5 4am5_A Bacterioferritin; metal 55.1 30 0.001 28.4 6.6 90 192-312 39-133 (159)
6 2oh3_A Rubrerythrin, COG1633: 50.5 20 0.00067 29.8 4.8 103 194-318 40-147 (167)
7 1zpy_A Hypothetical protein NE 41.6 21 0.00071 29.0 3.4 37 255-312 30-66 (95)
8 1vjx_A Putative ferritin-like 40.7 30 0.001 28.5 4.4 107 182-312 34-148 (157)
9 2fzf_A Hypothetical protein; s 40.1 22 0.00076 29.5 3.5 97 193-316 50-157 (175)
10 2fkz_A Bacterioferritin; ferro 37.4 22 0.00076 28.0 3.0 87 194-311 40-132 (155)
11 2fzf_A Hypothetical protein; s 36.0 37 0.0013 28.1 4.2 44 252-316 29-72 (175)
12 1jm0_A Protein (four-helix bun 32.7 37 0.0013 24.0 3.2 34 253-311 9-42 (50)
13 2oh3_A Rubrerythrin, COG1633: 32.5 38 0.0013 28.0 3.8 50 249-316 11-60 (167)
14 1vjx_A Putative ferritin-like 32.3 42 0.0014 27.6 4.0 40 253-314 24-63 (157)
15 3b5o_A CADD-like protein of un 28.8 3.3E+02 0.011 25.3 9.7 71 232-305 123-201 (244)
16 3pwf_A Rubrerythrin; non heme 24.6 1.5E+02 0.0051 25.5 6.2 89 195-326 42-133 (170)
17 3ppb_A Putative TETR family tr 20.2 3E+02 0.01 21.0 6.8 121 162-288 30-159 (195)
No 1
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=73.15 E-value=1.7 Score=41.62 Aligned_cols=129 Identities=11% Similarity=0.020 Sum_probs=73.4
Q ss_pred eeeecccCChhHHHHHHHhhhhhccccCcc--hHHHHHHHH-HhHHHHHHHHHHhh-------CchHHH-----------
Q 019741 163 MLETVAAVPGMVGGMLLHCKSLRRFEHSGG--WIKALLEEA-ENERMHLMTFMEVA-------KPKWYE----------- 221 (336)
Q Consensus 163 ~LETVA~VPGmV~gml~HLrSLR~~~rd~G--wI~tLLeEA-ENERmHLLtfmel~-------kP~~~e----------- 221 (336)
++|-++|.=|=..++++-|.-=-.++..+. -++.||... --|..|+-++-.+. .|...+
T Consensus 26 L~eq~GG~~GElsAamqYl~Qs~~~~~~~~~~~~~dLL~dIatEEL~HlEmvat~I~~L~~Ga~~~~~~~~~~~~~~p~~ 105 (302)
T 2v8t_A 26 VQALLGGRFGEMSTLMNYMYQSFNFRGKKALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDPASTPLG 105 (302)
T ss_dssp HTHHHHSTTSHHHHHHHHHHHHHHCSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCCCCCCCCGGGCTTG
T ss_pred HHHHhCCCccHHHHHHHHHHHHccCCCCcchHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCChhhhhcccccccchHH
Confidence 567777777755666666654444544322 366665554 88888986655441 111110
Q ss_pred --------HHHHHHHHHHH-----HHHHHHHHHh---ChhhHhhhhhhhhhhHHHHHHHHHHHhcCCCCCCCCCCHHHHH
Q 019741 222 --------RALVFAVQGVF-----FNAYFLGYLI---SPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIATD 285 (336)
Q Consensus 222 --------R~lv~~aQgvf-----fn~yf~~Yli---SPr~AHRfvGYLEEEAV~TYT~~L~did~G~l~n~pAP~IAi~ 285 (336)
+..+...++.+ .+.+...|+. .+...-+-.=-.|..|+.+|.+.++.+|
T Consensus 106 ~a~~~~~~~~~i~~g~g~~p~ds~G~pWta~Yv~~~Gdl~aDL~~NiaAE~~Ar~~Y~rL~~~td--------------- 170 (302)
T 2v8t_A 106 FAKDVRNAAHFIAGGANSLVMGAMGEHWNGEYVFTSGNLILDLLHNFFLEVAARTHKLRVYEMTD--------------- 170 (302)
T ss_dssp GGGGSSCSHHHHTSSSCCCSBCTTSCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTCC---------------
T ss_pred HhhhcCCcHHHhhcCCCCCccCCCCCCCCcchhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC---------------
Confidence 00111000000 0000112322 2333334444459999999999998873
Q ss_pred hhCCCCCCChHHHHHHHhhhhhhhHhh
Q 019741 286 YWRLPPNSTLKDVVLVVRADEAHHRDV 312 (336)
Q Consensus 286 YW~Lp~datLrDvil~IRaDEa~HRdv 312 (336)
|-..+|+|..|+.||..|...
T Consensus 171 ------Dp~vkd~L~fLi~RE~~H~~~ 191 (302)
T 2v8t_A 171 ------NPVAREMIGYLLVRGGVHAAA 191 (302)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHH
T ss_pred ------ChhHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999765
No 2
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=60.79 E-value=4.3 Score=38.14 Aligned_cols=124 Identities=19% Similarity=0.143 Sum_probs=72.4
Q ss_pred eeeecccCChhHHHHHHHhhhhhccccCcchH-HHHHH-HHHhHHHHHHHHHHhh-------CchHHHHHH---H--HHH
Q 019741 163 MLETVAAVPGMVGGMLLHCKSLRRFEHSGGWI-KALLE-EAENERMHLMTFMEVA-------KPKWYERAL---V--FAV 228 (336)
Q Consensus 163 ~LETVA~VPGmV~gml~HLrSLR~~~rd~GwI-~tLLe-EAENERmHLLtfmel~-------kP~~~eR~l---v--~~a 228 (336)
++|-++|.=|=..++++-|.-=-.++.. -+ +.||. =+--|..|+-++-.+. .+. ..... . ...
T Consensus 25 L~e~~GG~~GElsAamqYl~Q~~~~~~~--~~y~dLL~dIatEEl~HlEmva~~I~~L~~ga~~~-~~~a~~~p~~~~~~ 101 (266)
T 1o9i_A 25 LQESLGGQWGETTGMMSFLSQGWASTGA--EKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFG-PEDLKRDPSLATTM 101 (266)
T ss_dssp HHHHHHSTTSHHHHHHHHHHHHHHCCSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCS-HHHHHHCTTHHHHH
T ss_pred HHHHhCCCccHHHHHHHHHHHHhcCCCc--HHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCcc-hhhcccchhhHhhh
Confidence 5666777666555566666543344432 35 55554 4588889986655542 222 22210 0 000
Q ss_pred HHHHHHH-HHH------------------HHHhC---hhhHhhhhhhhhhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHh
Q 019741 229 QGVFFNA-YFL------------------GYLIS---PKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIATDY 286 (336)
Q Consensus 229 Qgvffn~-yf~------------------~YliS---Pr~AHRfvGYLEEEAV~TYT~~L~did~G~l~n~pAP~IAi~Y 286 (336)
.+ .|. +++ .|+.+ +...-+-.=-.|..|+.+|.+.++.+|
T Consensus 102 ~g--~n~~~~~~~g~g~~p~ds~G~pWt~~yv~~~Gdl~aDL~~niaaE~~Ar~~Y~rl~~~td---------------- 163 (266)
T 1o9i_A 102 AG--MDPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESEARLQVSRLYSMTE---------------- 163 (266)
T ss_dssp HH--SCHHHHHTTSSCCCSBCTTCCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTCC----------------
T ss_pred cC--CChHHHHhcCCCCCccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC----------------
Confidence 00 111 122 13322 333334444458899999999998873
Q ss_pred hCCCCCCChHHHHHHHhhhhhhhHhh
Q 019741 287 WRLPPNSTLKDVVLVVRADEAHHRDV 312 (336)
Q Consensus 287 W~Lp~datLrDvil~IRaDEa~HRdv 312 (336)
|-..+|+|..|+.||..|...
T Consensus 164 -----Dp~vkd~L~fLi~RE~~H~~~ 184 (266)
T 1o9i_A 164 -----DEGVRDMLKFLLARETQHQLQ 184 (266)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHH
T ss_pred -----ChhHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999765
No 3
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=58.55 E-value=7.3 Score=31.76 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=30.9
Q ss_pred hhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHh
Q 019741 255 EEEAIHSYTEFLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRD 311 (336)
Q Consensus 255 EEEAV~TYT~~L~did~G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRd 311 (336)
|=|||.-|.+.+..+ +|.-++.|+.-||+||-.|..
T Consensus 30 EleAI~~Y~q~a~~~---------------------~d~~~k~vl~~i~~EEkeH~g 65 (95)
T 3k6c_A 30 ELEAVDLYNQRVNAC---------------------KDKELKAILAHNRDEEKEHAA 65 (95)
T ss_dssp HHHHHHHHHHHHHHC---------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC---------------------CCHHHHHHHHHHHHHHHHHHH
Confidence 558999999998886 367899999999999999964
No 4
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=55.30 E-value=6.3 Score=33.09 Aligned_cols=32 Identities=22% Similarity=0.273 Sum_probs=24.2
Q ss_pred CCCCCChHHHHHHHhhhhhhhHhhhhccccccccc
Q 019741 289 LPPNSTLKDVVLVVRADEAHHRDVNHYASDIHYQG 323 (336)
Q Consensus 289 Lp~datLrDvil~IRaDEa~HRdvNH~~ad~~~q~ 323 (336)
+-++.--+++|+-||.||..| ++.|..++..|
T Consensus 57 ~AP~ee~k~iI~eIr~DE~rH---~~~F~~lY~TG 88 (115)
T 2hz8_A 57 KARNPEKRQVIDKILEDEEKH---IEWLKAASKQG 88 (115)
T ss_dssp SCCCTTTTTTHHHHHHHHHHH---HHHHHHHHHSS
T ss_pred cCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHhC
Confidence 456677899999999999999 45555555544
No 5
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=55.07 E-value=30 Score=28.37 Aligned_cols=90 Identities=22% Similarity=0.075 Sum_probs=59.4
Q ss_pred chHHHHHHHHHhHHHHHHHHHHhh-----CchHHHHHHHHHHHHHHHHHHHHHHHhChhhHhhhhhhhhhhHHHHHHHHH
Q 019741 192 GWIKALLEEAENERMHLMTFMEVA-----KPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFL 266 (336)
Q Consensus 192 GwI~tLLeEAENERmHLLtfmel~-----kP~~~eR~lv~~aQgvffn~yf~~YliSPr~AHRfvGYLEEEAV~TYT~~L 266 (336)
|.-+.+.++|.+|+.|...|++.. .|..-. + --.-..-++.-+....=-.|.+++..|.+++
T Consensus 39 ~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~---------~----~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~ 105 (159)
T 4am5_A 39 DLAKKWRAESIEEMAHADKFVERILFLEGLPNLQT---------L----DPLRIGQTVKEVLESDLAAEREARALYQEGA 105 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSB---------C----CCCCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccc---------c----cccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667899999999999887741 332100 0 0000012444445555556889999999988
Q ss_pred HHhcCCCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHhh
Q 019741 267 KELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDV 312 (336)
Q Consensus 267 ~did~G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRdv 312 (336)
+..++ -.|...+|++..|-.||.+|.+-
T Consensus 106 ~~a~~------------------~~D~~t~~~l~~il~eEeeH~~~ 133 (159)
T 4am5_A 106 AYAAS------------------VGDFPSKNLFEELMGDEEHHIDF 133 (159)
T ss_dssp HHHHH------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH------------------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 76532 23778899999999999999754
No 6
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=50.54 E-value=20 Score=29.76 Aligned_cols=103 Identities=17% Similarity=0.087 Sum_probs=68.4
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhC----chHHHHHHHH-HHHHHHHHHHHHHHHhChhhHhhhhhhhhhhHHHHHHHHHHH
Q 019741 194 IKALLEEAENERMHLMTFMEVAK----PKWYERALVF-AVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKE 268 (336)
Q Consensus 194 I~tLLeEAENERmHLLtfmel~k----P~~~eR~lv~-~aQgvffn~yf~~YliSPr~AHRfvGYLEEEAV~TYT~~L~d 268 (336)
-+.+..-|.-|+.|..+|.++.. |+. .+.-+. ...........+-++.++..+.++.--.|.+|+..|++..+.
T Consensus 40 k~~f~~LA~eE~~H~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~E~~a~~fY~~~a~~ 118 (167)
T 2oh3_A 40 ATVFRDMARFSTLHGDEIKQRSRALELPKL-MSWQYRWKTPPEVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAAN 118 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCCCC-CGGGTSCCCCCCSSCC---CGGGSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccccccCCCcHhhhhHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556689999999999999852 311 000000 000000000123466678889999999999999999999777
Q ss_pred hcCCCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHhhhhcccc
Q 019741 269 LDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYASD 318 (336)
Q Consensus 269 id~G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRdvNH~~ad 318 (336)
+ +|...++++..|-.||..|.+.=..+-+
T Consensus 119 ~---------------------~d~~~k~~~~~la~eE~~H~~~l~~~~~ 147 (167)
T 2oh3_A 119 S---------------------ADPEVKRLGADFAAEEAEHVVALDKWIE 147 (167)
T ss_dssp C---------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C---------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 3678899999999999999876554433
No 7
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=41.64 E-value=21 Score=29.04 Aligned_cols=37 Identities=24% Similarity=0.375 Sum_probs=30.1
Q ss_pred hhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHhh
Q 019741 255 EEEAIHSYTEFLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDV 312 (336)
Q Consensus 255 EEEAV~TYT~~L~did~G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRdv 312 (336)
|-+||.-|.+..... +|.-+++|+.-||++|..|..-
T Consensus 30 EleAI~~Y~q~A~~t---------------------~D~evk~vl~~iadEEkeH~g~ 66 (95)
T 1zpy_A 30 ELEAVDLYNQRVNAC---------------------KDKELKAILAHNRDEEKEHAAM 66 (95)
T ss_dssp HHHHHHHHHHHHHHC---------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC---------------------CCHHHHHHHHHHHHHHHHHHHH
Confidence 557888888777765 4778999999999999999643
No 8
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=40.72 E-value=30 Score=28.45 Aligned_cols=107 Identities=23% Similarity=0.256 Sum_probs=66.5
Q ss_pred hhhhccccCcchHHH-HHHHHHhHHHHHHHHHHhhCch-HHHHHHHH---HHHHHHHHHHH---HHHHhChhhHhhhhhh
Q 019741 182 KSLRRFEHSGGWIKA-LLEEAENERMHLMTFMEVAKPK-WYERALVF---AVQGVFFNAYF---LGYLISPKFAHRMVGY 253 (336)
Q Consensus 182 rSLR~~~rd~GwI~t-LLeEAENERmHLLtfmel~kP~-~~eR~lv~---~aQgvffn~yf---~~YliSPr~AHRfvGY 253 (336)
+++-. -.+ .-++. +..-|+-|..|.-+|.++..-. |-... .. .....+|...- ..+..+...+.++.--
T Consensus 34 ~~lA~-~~~-~~~k~lF~~LA~eE~~H~~~l~~l~~~~~~~~~~-~~l~~~~~~~~f~~~~~~~~~~~~~~~~~l~~ai~ 110 (157)
T 1vjx_A 34 RELSE-HFN-GEIKKTFLELADQERIHAEIFRKMSDQENWDEVD-SYLAGYAFYEVFPDTSEILRRKDLTLKEVLDIAIS 110 (157)
T ss_dssp HHHTT-SCC-SHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT-CBCCSBCCCCCCCCCTTGGGCSCCCHHHHHHHHHH
T ss_pred HHHHH-cCC-HHHHHHHHHHHHHHHHHHHHHHHhhccCcchhHH-HHHHhhhhhhccchhhhhhcccccCHHHHHHHHHH
Confidence 34444 334 34554 5557899999999999984211 10000 00 00000000000 0023346778888888
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHhh
Q 019741 254 LEEEAIHSYTEFLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDV 312 (336)
Q Consensus 254 LEEEAV~TYT~~L~did~G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRdv 312 (336)
.|.+|+..|.++.+.+ +|...+.++..|-+||..|...
T Consensus 111 ~E~~a~~~Y~~~a~~~---------------------~d~~~k~l~~~la~eE~~H~~~ 148 (157)
T 1vjx_A 111 VEKDSIILYYELKDGL---------------------VNSDAQKTVKKIIDQEKEHLRK 148 (157)
T ss_dssp HHHHHHHHHHHHHHHC---------------------CSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC---------------------CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987 2567899999999999999753
No 9
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=40.13 E-value=22 Score=29.49 Aligned_cols=97 Identities=14% Similarity=-0.051 Sum_probs=62.1
Q ss_pred hHH-HHHHHHHhHHHHHHHHHHhhCc---h--HHHHHHHHHHHHHHHHHHH-----HHHHhChhhHhhhhhhhhhhHHHH
Q 019741 193 WIK-ALLEEAENERMHLMTFMEVAKP---K--WYERALVFAVQGVFFNAYF-----LGYLISPKFAHRMVGYLEEEAIHS 261 (336)
Q Consensus 193 wI~-tLLeEAENERmHLLtfmel~kP---~--~~eR~lv~~aQgvffn~yf-----~~YliSPr~AHRfvGYLEEEAV~T 261 (336)
-++ .+.+-|+.|+.|.-.|.++.+- + ...+ ..-+|. .+. +.+..++..+-+..--.|.+|+..
T Consensus 50 ~~~~~f~~lA~~E~~H~~~l~~~~~~l~g~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~L~~ai~~E~~a~~~ 123 (175)
T 2fzf_A 50 ALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFP-----KEHIGP-ELQPVARELEKVQDIIDLIRWAMKAEEIAAEF 123 (175)
T ss_dssp THHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCC-----SCCBSC-CCCCCCSCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcch-----hhhhhh-hhhhhHHhccccCCHHHHHHHHHHHHHHHHHH
Confidence 355 5566899999999988887320 0 0000 000100 000 012223566777777789999999
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHhhhhcc
Q 019741 262 YTEFLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYA 316 (336)
Q Consensus 262 YT~~L~did~G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRdvNH~~ 316 (336)
|.++++.. +|...++++..|-.||..|.+.=-.+
T Consensus 124 Y~~~a~~~---------------------~d~~~r~l~~~ia~eE~~H~~~l~~~ 157 (175)
T 2fzf_A 124 YLKLEEMV---------------------KEEEKKRLMRYLADMERGHYYTLRAE 157 (175)
T ss_dssp HHHHHHTS---------------------CSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhC---------------------CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999885 14568899999999999998754443
No 10
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=37.35 E-value=22 Score=28.00 Aligned_cols=87 Identities=15% Similarity=0.070 Sum_probs=58.7
Q ss_pred HHHHH-HHHHhHHHHHHHHHHhh-----CchHHHHHHHHHHHHHHHHHHHHHHHhChhhHhhhhhhhhhhHHHHHHHHHH
Q 019741 194 IKALL-EEAENERMHLMTFMEVA-----KPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLK 267 (336)
Q Consensus 194 I~tLL-eEAENERmHLLtfmel~-----kP~~~eR~lv~~aQgvffn~yf~~YliSPr~AHRfvGYLEEEAV~TYT~~L~ 267 (336)
++..| ++|.+|+.|...+.+.. .|..-. + .- +-.--++.-+.+.+=-.|++++..|.++++
T Consensus 40 l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~--~----~~-------~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~ 106 (155)
T 2fkz_A 40 LGKHEYHESIDEMKHADKLIKRILFLEGLPNLQE--L----GK-------LLIGEHTKEMLECDLKLEQAGLPDLKAAIA 106 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSC--C----CC-------CCCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC--C----CC-------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666 99999999999888752 343211 0 00 000124555666666668889999999887
Q ss_pred HhcCCCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHh
Q 019741 268 ELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRD 311 (336)
Q Consensus 268 did~G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRd 311 (336)
..++ ..|...+|++..+-.||-+|..
T Consensus 107 ~a~~------------------~~D~~t~~~l~~~~~eee~h~~ 132 (155)
T 2fkz_A 107 YCES------------------VGDYASRELLEDILESEEDHID 132 (155)
T ss_dssp HHHH------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH------------------cCCHHHHHHHHHHHHHHHHHHH
Confidence 7643 1367789999999999999954
No 11
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=36.03 E-value=37 Score=28.13 Aligned_cols=44 Identities=16% Similarity=0.131 Sum_probs=35.3
Q ss_pred hhhhhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHhhhhcc
Q 019741 252 GYLEEEAIHSYTEFLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYA 316 (336)
Q Consensus 252 GYLEEEAV~TYT~~L~did~G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRdvNH~~ 316 (336)
--.|.+|+..|+.+.+.. .+..++++|..+-.||..|.+.=..+
T Consensus 29 ~~~E~~a~~~Y~~~A~~~---------------------~~~~~~~~f~~lA~~E~~H~~~l~~~ 72 (175)
T 2fzf_A 29 IKAEIGAREFYKSLAEKI---------------------KIEALKEKINWLAEEEKKHEALLRKL 72 (175)
T ss_dssp HHHHHHHHHHHHHHHHSC---------------------CCTTHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHC---------------------CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999999888765 24578999999999999999874444
No 12
>1jm0_A Protein (four-helix bundle model); alpha-helical bundle, protein design, de novo protein; 1.70A {Synthetic} SCOP: k.8.1.1 PDB: 1jmb_A 1ovu_A 1ovv_A 1lt1_A 1ec5_A 1nvo_A 1ovr_A 2kik_A 1u7j_A 1y47_A 1mft_A 1u7m_A
Probab=32.72 E-value=37 Score=24.04 Aligned_cols=34 Identities=32% Similarity=0.359 Sum_probs=28.1
Q ss_pred hhhhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHh
Q 019741 253 YLEEEAIHSYTEFLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRD 311 (336)
Q Consensus 253 YLEEEAV~TYT~~L~did~G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRd 311 (336)
-+|.+|+..|.+.++- .=||++..|-.||-.|-+
T Consensus 9 ~~E~~~i~~l~eai~~-------------------------vsr~lle~iL~dEEeH~d 42 (50)
T 1jm0_A 9 KLELQAIKQYREALEY-------------------------VKLPVLAKILEDEEKHIE 42 (50)
T ss_dssp HHHHHHHHHHHHHHHH-------------------------HCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHH
Confidence 3688899988887776 447999999999999975
No 13
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=32.47 E-value=38 Score=27.96 Aligned_cols=50 Identities=20% Similarity=0.100 Sum_probs=36.9
Q ss_pred hhhhhhhhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHhhhhcc
Q 019741 249 RMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYA 316 (336)
Q Consensus 249 RfvGYLEEEAV~TYT~~L~did~G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRdvNH~~ 316 (336)
+..--.|+++...|..+-+..+. ..+..++++|..+..||..|++.=..+
T Consensus 11 ~~Ai~~E~~~~~~Y~~lA~~~~~------------------~~~~~~k~~f~~LA~eE~~H~~~l~~~ 60 (167)
T 2oh3_A 11 AHAIALETEAAERYVELADMMEA------------------HNNLDTATVFRDMARFSTLHGDEIKQR 60 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH------------------TTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh------------------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445799999999998883210 124578999999999999999874433
No 14
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=32.27 E-value=42 Score=27.57 Aligned_cols=40 Identities=28% Similarity=0.329 Sum_probs=32.9
Q ss_pred hhhhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHhhhh
Q 019741 253 YLEEEAIHSYTEFLKELDKGNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNH 314 (336)
Q Consensus 253 YLEEEAV~TYT~~L~did~G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRdvNH 314 (336)
-.|++++..|..+.+ . ++..++++|..+..||..|++.=.
T Consensus 24 ~~E~~~~~~Y~~lA~-~---------------------~~~~~k~lF~~LA~eE~~H~~~l~ 63 (157)
T 1vjx_A 24 RLEEEGERFYRELSE-H---------------------FNGEIKKTFLELADQERIHAEIFR 63 (157)
T ss_dssp HHHHHHHHHHHHHTT-S---------------------CCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-c---------------------CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999988766 4 256789999999999999998733
No 15
>3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A*
Probab=28.84 E-value=3.3e+02 Score=25.33 Aligned_cols=71 Identities=8% Similarity=0.007 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhChhhHhhhhhhhhhhHHHHH-HHHHHHhcCCCCCCCCCCHHHHHhhCCC-C------CCChHHHHHHHh
Q 019741 232 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSY-TEFLKELDKGNIENVPAPAIATDYWRLP-P------NSTLKDVVLVVR 303 (336)
Q Consensus 232 ffn~yf~~YliSPr~AHRfvGYLEEEAV~TY-T~~L~did~G~l~n~pAP~IAi~YW~Lp-~------datLrDvil~IR 303 (336)
|...++-+| ||....-+-...--|+...+ ..++++|-.|. .....|+-+..||.+. + ..+|++.+...=
T Consensus 123 ~idt~~~lc--s~d~~~aLGA~yatE~iaipe~~ly~~li~gL-~~~~~~~~~l~FF~~HidelE~~Ha~~l~~~l~~~~ 199 (244)
T 3b5o_A 123 LLRTVLSLF--DRQVDYVLGATYAIEATSIPELTLIVKLVEWL-HEGAIPKDLQYFFSKHLDEWEIEHEAGLRTSVAAYI 199 (244)
T ss_dssp HHHHHHHHH--TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CSSCCCHHHHHHHHHHHC-------CHHHHHHHTTC
T ss_pred HHHHHHHHh--CCCHHHHHHHHHHHhhhhhhHHHHHHHHHHHH-HhCCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 666677667 77777777776677777444 22344443333 2237788999999754 2 135666555443
Q ss_pred hh
Q 019741 304 AD 305 (336)
Q Consensus 304 aD 305 (336)
++
T Consensus 200 ~~ 201 (244)
T 3b5o_A 200 QP 201 (244)
T ss_dssp CG
T ss_pred hh
Confidence 33
No 16
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=24.62 E-value=1.5e+02 Score=25.47 Aligned_cols=89 Identities=15% Similarity=0.090 Sum_probs=57.3
Q ss_pred HHHHHHHHhHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHhChhhHhhhhhhhh--h-hHHHHHHHHHHHhcC
Q 019741 195 KALLEEAENERMHLMTFMEVAKPKWYERALVFAVQGVFFNAYFLGYLISPKFAHRMVGYLE--E-EAIHSYTEFLKELDK 271 (336)
Q Consensus 195 ~tLLeEAENERmHLLtfmel~kP~~~eR~lv~~aQgvffn~yf~~YliSPr~AHRfvGYLE--E-EAV~TYT~~L~did~ 271 (336)
+.+.+.|+||+.|-..|.+..+. + +.+.=.|-.-++ . |....|-.|++.-+.
T Consensus 42 ~~F~~~A~~E~~HA~~~~~~L~~------------------------i-~~t~enL~~a~~gE~~e~~~mY~~~a~~A~e 96 (170)
T 3pwf_A 42 KLFRAIAYAEFVHAKNHFIALGK------------------------L-GKTPENLQMGIEGETFEVEEMYPVYNKAAEF 96 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC------------------------C-CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC------------------------C-CChHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 45678899999999988886432 1 233333333332 2 345667777665432
Q ss_pred CCCCCCCCCHHHHHhhCCCCCCChHHHHHHHhhhhhhhHhhhhcccccccccccc
Q 019741 272 GNIENVPAPAIATDYWRLPPNSTLKDVVLVVRADEAHHRDVNHYASDIHYQGRQL 326 (336)
Q Consensus 272 G~l~n~pAP~IAi~YW~Lp~datLrDvil~IRaDEa~HRdvNH~~ad~~~q~~~~ 326 (336)
-.+....|.|..|..||..|.+-=-.+-+...+|..+
T Consensus 97 ------------------eg~~~~a~~f~~i~~~E~~H~~~~~~~l~~l~~~~~~ 133 (170)
T 3pwf_A 97 ------------------QGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKGEDI 133 (170)
T ss_dssp ------------------HTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 1245678899999999999988776666665565544
No 17
>3ppb_A Putative TETR family transcription regulator; DNA-binding, helix-turn-helix motif, HTH motif, DNA/RNA-BIND helical bundle fold; HET: MSE PG4; 2.10A {Shewanella loihica}
Probab=20.15 E-value=3e+02 Score=21.05 Aligned_cols=121 Identities=16% Similarity=0.251 Sum_probs=58.9
Q ss_pred eeeeecccCChhHHHHHHHhhhhhccccCcchHHHHHHHHHhHHHHHHHHHHhh-CchHHHHHHHHHHHHH-------HH
Q 019741 162 MMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVA-KPKWYERALVFAVQGV-------FF 233 (336)
Q Consensus 162 i~LETVA~VPGmV~gml~HLrSLR~~~rd~GwI~tLLeEAENERmHLLtfmel~-kP~~~eR~lv~~aQgv-------ff 233 (336)
+=++-||.--|+.-+++-|. ++...+-+..++++..++....+. ..+. ..++.+++..++...+ .+
T Consensus 30 ~tv~~Ia~~agvs~~t~Y~~-----F~sK~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 103 (195)
T 3ppb_A 30 TSTATIAREAGVATGTLFHH-----FPSKEQLLEQLFLGVKQEFADAIQ-ASVSSRGDLKQDAEQLWFAALTWAMANPLK 103 (195)
T ss_dssp SCHHHHHHHHTCCHHHHHHH-----CSSHHHHHHHHHHHHHHHHHHHHH-HTCCCCSCHHHHHHHHHHHHHHHHHHCHHH
T ss_pred CCHHHHHHHhCCChhHHHHH-----cCCHHHHHHHHHHHHHHHHHHHHH-HHhhcccCHHHHHHHHHHHHHHHhhcCHHH
Confidence 34566777777776666443 444444555555554444322221 1111 3345555443322211 11
Q ss_pred HHHHHHHHhChhhHhhhhhhhhhhHHHHHHHHHHH-hcCCCCCCCCCCHHHHHhhC
Q 019741 234 NAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKE-LDKGNIENVPAPAIATDYWR 288 (336)
Q Consensus 234 n~yf~~YliSPr~AHRfvGYLEEEAV~TYT~~L~d-id~G~l~n~pAP~IAi~YW~ 288 (336)
..++..+..+|...-.+...+.+.-.....+++++ ++.|.+...++..+|.-+++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~ 159 (195)
T 3ppb_A 104 QAFFQLYSMSPTVEQSVRDQAMHGILGFIAELIRQGQASGELAEYPIELMQDNCHG 159 (195)
T ss_dssp HHHHHHHTTSTTSCHHHHHHHHHTTTHHHHHHHHHHHHTTSBCCCCHHHHHHHHHH
T ss_pred hHHHHHHhhCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHH
Confidence 22333344566555555545544444555666655 45688876555555555543
Done!