BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019743
(336 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B0JUK5|TRMB_MICAN tRNA (guanine-N(7)-)-methyltransferase OS=Microcystis aeruginosa
(strain NIES-843) GN=trmB PE=3 SV=1
Length = 211
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 102/194 (52%), Gaps = 11/194 (5%)
Query: 137 DWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT 196
DW+ Y D QPL +DIG G FLL MA+ ++NFLG+E+ LV + G++
Sbjct: 25 DWNQVYQDMTQPLHLDIGCARGKFLLQMAQVEPEINFLGIEIRQPLVIEANQERERLGLS 84
Query: 197 NGYFIATNATSTFRSIVASYPG-KLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLV 255
N F+ N ++ S P KL VSIQ P+P F + + R+VQ LV A++ +V
Sbjct: 85 NLAFVFGNMNVAPEILLQSLPADKLFWVSIQFPDPWFKQRHSKRRVVQPELVIALAKYMV 144
Query: 256 HDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWEQ 315
G VFLQSD+E + L M ++F + + +Q WL EN F V ++ E+
Sbjct: 145 AGGWVFLQSDVESIALEMTERFQAHPHF----------VRQHQTPWLEENIFPVPTEREK 194
Query: 316 HVIDRGAPMYRLML 329
++G P+YR +
Sbjct: 195 STYNKGQPVYRSLF 208
>sp|Q8YVX4|TRMB_NOSS1 tRNA (guanine-N(7)-)-methyltransferase OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=trmB PE=3 SV=1
Length = 219
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 104/199 (52%), Gaps = 11/199 (5%)
Query: 136 IDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI 195
++W AY P QPL +DIG G F+L MA+ + NFLGLE+ LV G+
Sbjct: 31 LEWEKAYSTPHQPLHLDIGCARGRFVLQMAQVEPNWNFLGLEIRESLVIEANQFRSQLGL 90
Query: 196 TNGYFIATNATSTFRSIVASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLL 254
TN +++ NA ++ + +++S P G L V+IQ P+P F + R+VQ LV+ +++ L
Sbjct: 91 TNLHYLYCNANNSLQPLLSSLPTGILQRVTIQFPDPWFKTRHAKRRVVQPELVQDIANYL 150
Query: 255 VHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWE 314
G VFLQSD+E V + M +F + K G WL EN V ++ E
Sbjct: 151 AVGGVVFLQSDMEFVAVEMCDRF----------AANPAFKKVGTGEWLTENPLPVATERE 200
Query: 315 QHVIDRGAPMYRLMLSKPS 333
+RG P+YR + + S
Sbjct: 201 TTTQNRGEPVYRALFERSS 219
>sp|Q3M3Q5|TRMB_ANAVT tRNA (guanine-N(7)-)-methyltransferase OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=trmB PE=3 SV=1
Length = 215
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 136 IDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI 195
++W Y P QPL +DIG G F+L MA+ NFLGLE+ LV G+
Sbjct: 27 LEWEKVYSSPHQPLHLDIGCARGRFVLQMAQVEPRWNFLGLEIREPLVIEANQFRSQLGL 86
Query: 196 TNGYFIATNATSTFRSIVASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLL 254
+N +++ NA ++ + +++S P G L V+IQ P+P F + R+VQ LV+ +++ L
Sbjct: 87 SNLHYLYCNANNSLQPLLSSLPTGILQRVTIQFPDPWFKTRHAKRRVVQPELVQDIANYL 146
Query: 255 VHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWE 314
G VFLQSD+E V + M +F + K G WL EN V ++ E
Sbjct: 147 AVGGVVFLQSDMEFVAVEMCDRF----------AANPAFKKVGSGEWLSENPLPVATERE 196
Query: 315 QHVIDRGAPMYRLMLSKPS 333
+RG P+YR + + S
Sbjct: 197 TTTQNRGEPVYRALFERIS 215
>sp|Q2JRH1|TRMB_SYNJA tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain
JA-3-3Ab) GN=trmB PE=3 SV=1
Length = 236
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 103/197 (52%), Gaps = 19/197 (9%)
Query: 138 WSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHC---RDSLQLSG 194
W Y QPL +DIGSG+G FLL MA+++ D NFLG+E+ LV RD L G
Sbjct: 55 WERVYRRLGQPLHLDIGSGSGRFLLRMAQEQPDWNFLGVEIRQPLVERANAWRDEL---G 111
Query: 195 ITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLL 254
+ N +F+ N + R + A PG L V+IQ P+P F + H+ R+VQ LV ++ LL
Sbjct: 112 LDNVHFLFANINVSLRHLFA--PGDLSRVTIQFPDPWFKKRHHKRRIVQPRLVADLALLL 169
Query: 255 VHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWE 314
VFLQSD+ EV M +FLE+ + G + +N FG+ ++ E
Sbjct: 170 QPGSPVFLQSDVREVAEEMVDRFLEHPQ-----------FWNPYQGPIDDNPFGIPTERE 218
Query: 315 QHVIDRGAPMYRLMLSK 331
+ G P+YR L +
Sbjct: 219 WQCLQLGLPIYRYWLER 235
>sp|P73161|TRMB_SYNY3 tRNA (guanine-N(7)-)-methyltransferase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=trmB PE=3 SV=2
Length = 211
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 137 DWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT 196
DW+ Y D +PL +DIG G F L MA++ D NFLG+E+ LV ++ G+
Sbjct: 25 DWATVYDDVQRPLHLDIGCARGRFPLKMAQQHPDWNFLGVEIRQPLVLEANETGDRLGLK 84
Query: 197 NGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVH 256
N +++ N +++P L VSIQ P+P F + ++ R+ Q LV A+++ L
Sbjct: 85 NLHYLFGNINVEPEKFFSAFPPTLQRVSIQFPDPWFKQRHNKRRVAQPELVTAIANALPP 144
Query: 257 DGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWEQH 316
G+V LQSD+E V M+ +F E V D WL EN GV ++ E
Sbjct: 145 GGEVLLQSDVEPVAQDMRDRFAE--NDNFVFTHD--------TPWLAENPLGVPTEREIA 194
Query: 317 VIDRGAPMYRLMLSK 331
+ P+YR +L +
Sbjct: 195 CFNLQRPVYRCLLQR 209
>sp|Q8DHH6|TRMB_THEEB tRNA (guanine-N(7)-)-methyltransferase OS=Thermosynechococcus
elongatus (strain BP-1) GN=trmB PE=3 SV=1
Length = 213
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 101/195 (51%), Gaps = 13/195 (6%)
Query: 137 DWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT 196
DWS Y P+QPL +DIG G FLL MA + NFLGLE+ LV + +
Sbjct: 29 DWSRIYEQPSQPLHLDIGCARGTFLLEMAALYPEQNFLGLEIRYPLVVAANERRDRQQLR 88
Query: 197 NGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVH 256
N +++ NA I+ P L V+IQ P+P F R H+ R+V LV +++LL
Sbjct: 89 NLHYLWGNANVHLSKILGGLP--LHTVTIQFPDPWFKRRHHKRRVVTPELVATLAELLPA 146
Query: 257 DGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWEQH 316
G+V LQSD+ EV M QQF +G + T T+ WL ++ + V ++ E+
Sbjct: 147 GGRVVLQSDVFEVAESMVQQFRAHGAFR--------STCTD---WLPQSPWPVATEREKC 195
Query: 317 VIDRGAPMYRLMLSK 331
V+++G +YR +
Sbjct: 196 VLNKGLAVYRWQFER 210
>sp|Q5N2X5|TRMB_SYNP6 tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain
ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=trmB PE=3 SV=1
Length = 213
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 137 DWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT 196
DW Y D +PL +DIG G FLL MA + + N+LGLE+ LV + +T
Sbjct: 25 DWQQVYADCDRPLHLDIGCARGRFLLAMATAQPEWNYLGLEIREPLVDEANAIARERELT 84
Query: 197 NGYFIATNATSTFRSIVASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLV 255
N Y+ +NA ++ S P G L VSIQ P+P F + + R+VQ LV+A++ L
Sbjct: 85 NLYYHFSNANLDLEPLLRSLPTGILQRVSIQFPDPWFKKRHQKRRVVQPELVQALATALP 144
Query: 256 HDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWEQ 315
+VFLQSD+ EV M + F + Q C WL EN V ++ E
Sbjct: 145 AGAEVFLQSDVLEVQAEMCEHFAAEPR-----FQRTC------LDWLPENPLPVPTEREI 193
Query: 316 HVIDRGAPMYR-LMLSKPS 333
V ++ P+YR L + +P+
Sbjct: 194 AVQNKQLPVYRALFIRQPA 212
>sp|P72546|TRMB_SYNE7 tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus elongatus
(strain PCC 7942) GN=trmB PE=3 SV=2
Length = 213
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 137 DWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT 196
DW Y D +PL +DIG G FLL MA + + N+LGLE+ LV + +T
Sbjct: 25 DWQQVYADCDRPLHLDIGCARGRFLLAMATAQPEWNYLGLEIREPLVDEANAIARERELT 84
Query: 197 NGYFIATNATSTFRSIVASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLV 255
N Y+ +NA ++ S P G L VSIQ P+P F + + R+VQ LV+A++ L
Sbjct: 85 NLYYHFSNANLDLEPLLRSLPTGILQRVSIQFPDPWFKKRHQKRRVVQPELVQALATALP 144
Query: 256 HDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWEQ 315
+VFLQSD+ EV M + F + Q C WL EN V ++ E
Sbjct: 145 AGAEVFLQSDVLEVQAEMCEHFAAEPR-----FQRTC------LDWLPENPLPVPTEREI 193
Query: 316 HVIDRGAPMYR-LMLSKPS 333
V ++ P+YR L + +P+
Sbjct: 194 AVQNKQLPVYRALFIRQPA 212
>sp|Q117P8|TRMB_TRIEI tRNA (guanine-N(7)-)-methyltransferase OS=Trichodesmium erythraeum
(strain IMS101) GN=trmB PE=3 SV=1
Length = 220
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 137 DWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT 196
++S Y D +PL +DIG G FL MA+ + NFLGLE+ LV + G+
Sbjct: 25 NFSDIYADIKKPLYLDIGCARGRFLWQMAQVEPEWNFLGLEIREPLVIEANNWRDEKGLN 84
Query: 197 NGYFIATNATSTFRSIVASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLV 255
N +++ NA + I S+P G L VSI P+P F R R+VQ LVE +++ L
Sbjct: 85 NLHYLFCNANISLGKIFESFPKGILKKVSILFPDPWFKRRHQTRRVVQPKLVEDLANYLT 144
Query: 256 HDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWEQ 315
G+VFL SDIE+V M +F +G + WL EN V S+ E+
Sbjct: 145 VGGEVFLHSDIEKVAKEMCNRFSAHG-----------SFYRSYNDWLKENILPVLSEREK 193
Query: 316 HVIDRGAPMYRLMLSK 331
+ + P+YR + K
Sbjct: 194 VTLGKNQPVYRALFIK 209
>sp|Q2JJQ0|TRMB_SYNJB tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=trmB PE=3 SV=1
Length = 239
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 19/197 (9%)
Query: 138 WSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHC---RDSLQLSG 194
W Y QP +DIG+G+G FLL +A+++ D NFLG+E+ LV RD L G
Sbjct: 58 WERVYRRLGQPFHLDIGTGSGRFLLRIAQEQPDWNFLGVEIRQALVERANAWRDEL---G 114
Query: 195 ITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLL 254
+ N +F+ N + R + A PG L V+I P+P F + H+ R+VQ LV ++ LL
Sbjct: 115 LDNVHFLFANINVSLRHLFA--PGDLSRVTILFPDPWFKKRHHKRRIVQPQLVADLALLL 172
Query: 255 VHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWE 314
VFLQSDI+EV M +FLE+ + +QG L N G+ ++ E
Sbjct: 173 RPGSPVFLQSDIQEVAEEMAARFLEHPQF----------WDPHQGP-LDSNPLGIPTERE 221
Query: 315 QHVIDRGAPMYRLMLSK 331
+ P+YR L +
Sbjct: 222 WQCLQLDLPIYRYWLER 238
>sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia
oleracea PE=2 SV=2
Length = 433
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P+AAI+GG + +K + L +CD L+ G M F A G+ V LVE+ D
Sbjct: 218 KRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGMSVGSSLVEEDKLDL 277
Query: 66 ASDLIQFARDKHITILYPKDFWCT-KIHHPNQVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A+ L+ A++K +++L P D K +I P+ GIPDGW +DIGP S++ +
Sbjct: 278 ATSLLAKAKEKGVSLLLPTDVVIADKFAADADSKIVPASGIPDGWMGLDIGPDSIKTFSE 337
Query: 125 TI 126
+
Sbjct: 338 AL 339
>sp|Q46HD3|TRMB_PROMT tRNA (guanine-N(7)-)-methyltransferase OS=Prochlorococcus marinus
(strain NATL2A) GN=trmB PE=3 SV=1
Length = 214
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 148 PLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATS 207
P+ +DIGS G FL+ +A K D NF+GLE+ LV+ C + +TN F+ N
Sbjct: 31 PIHLDIGSAKGEFLIELATKCPDWNFVGLEIREPLVSLCEKKRRKLELTNLKFLFCNVNV 90
Query: 208 TFRSIVASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 266
+ ++ G+L VSIQ P+P F R + R+++ +++ +++ + +G++F+QSDI
Sbjct: 91 SLDEWLSDLDFGQLKRVSIQFPDPWFKRKHFKRRVLKTNILNSIAKAMSKNGEIFIQSDI 150
Query: 267 EEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGW--LGENSFGVRSDWEQHVIDRGAPM 324
E+ +EY + ++ T+ N G + +N + V +D E + + +
Sbjct: 151 FEL--------IEYMTN--TIDENRYFTRKNVGDLRSINKNPYNVMTDREILSLKKNLLI 200
Query: 325 YRLMLSKPSCV 335
YR+M + S +
Sbjct: 201 YRVMYIRNSLL 211
>sp|A2C073|TRMB_PROM1 tRNA (guanine-N(7)-)-methyltransferase OS=Prochlorococcus marinus
(strain NATL1A) GN=trmB PE=3 SV=1
Length = 214
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 148 PLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATS 207
P+ +DIGS G FL+ +A K D NF+GLE+ LV+ C + +TN F+ N
Sbjct: 31 PIHLDIGSAKGEFLIELATKYPDWNFVGLEIREPLVSLCEKKRRKLELTNLKFLFCNVNV 90
Query: 208 TFRSIVASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 266
+ ++ G+L VSIQ P+P F R + R++ +++ +++ + DG++F+QSDI
Sbjct: 91 SLDEWLSDLDFGQLKRVSIQFPDPWFKRKHFKRRVLNTNILNSIAKSMSKDGEIFIQSDI 150
Query: 267 EEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGW--LGENSFGVRSDWEQHVIDRGAPM 324
+ +EY + ++ T+ N G + +N + V +D E + + +
Sbjct: 151 --------LKLIEYMTN--TIDENRYFTRKNVGDLRSIDKNPYDVMTDREIFSLKKNLLI 200
Query: 325 YRLMLSKPSCV 335
YR+M + S +
Sbjct: 201 YRVMYIRNSLL 211
>sp|A5GIJ2|TRMB_SYNPW tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain
WH7803) GN=trmB PE=3 SV=1
Length = 237
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 17/195 (8%)
Query: 142 YHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHC-RDSLQLSGITNGYF 200
+ DP +P+ +DIG G+ L +A R D N LG+E+ LV RD QL + N ++
Sbjct: 25 FDDPGRPIHLDIGCARGICLQELAALRPDRNHLGVEIRRPLVRSAQRDRDQLERL-NLHY 83
Query: 201 IATNATSTFRSIVASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGK 259
+ NA + +A+ P +L LVSIQ P+P F R + R++Q SL+ A++ L +
Sbjct: 84 LFCNANVSLEGWMAALPQDRLQLVSIQFPDPWFKRRHRKRRVLQPSLLLAIAATLQPGRE 143
Query: 260 VFLQSDIEEVMLRMKQQFLEYGKGKLVLVQ-DECDTKTNQGG--WLGENSFGVRSDWEQH 316
+F+QSD+ V+ M + LV+ C + + W +N V ++ E++
Sbjct: 144 LFVQSDVLAVIDPM-----------VALVELSGCFDRPAEDARPWRADNPLPVPTERERY 192
Query: 317 VIDRGAPMYRLMLSK 331
V + G P YR++ +
Sbjct: 193 VQELGLPAYRVLYRR 207
>sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2
SV=1
Length = 481
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P+AAI+GG + +K + L +CD L+ G M F A GL V LVE+ +
Sbjct: 265 KRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLEL 324
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A+ L++ A+ K +++L P D P+ +I P+ IPDGW +DIGP SV+
Sbjct: 325 ATSLLEKAKAKGVSLLLPSDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSVKTFND 384
Query: 125 TITKCK 130
+ K
Sbjct: 385 ALDTTK 390
>sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1
Length = 401
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
+KP+AAI+GG + +K + L ++ D LI G M F A GL V LVE+ +
Sbjct: 191 KKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLEL 250
Query: 66 ASDLIQFARDKHITILYPKDFWCT-KIHHPNQVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A+ LI+ A+ K + +L P D K + +I P+ IPDGW +D+GP S++
Sbjct: 251 ATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDVGPDSIKTFAE 310
Query: 125 TITKCK 130
+ K
Sbjct: 311 ALDTTK 316
>sp|O66519|PGK_AQUAE Phosphoglycerate kinase OS=Aquifex aeolicus (strain VF5) GN=pgk
PE=3 SV=1
Length = 397
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AI+GG + +K + L R D L G M+F + A+G V LVE D
Sbjct: 188 QRPVVAILGGAKVSSKLEVIKNLIRRVDKLFIGGAMAFTFLKAMGYKVGNSLVEDDLQDV 247
Query: 66 ASDLIQFARDKHITILYPKDFWC-TKIHHPNQVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A DLI A+ I + P DF ++ ++ P IPDGW +DIGP SVE +
Sbjct: 248 ARDLIDVAKKLEIKLYLPVDFVIGQEVSENTPTKVVPWQEIPDGWMGLDIGPVSVELVKE 307
Query: 125 TITKCKAF 132
I+ +
Sbjct: 308 IISDAQTI 315
>sp|Q9LD57|PGKH1_ARATH Phosphoglycerate kinase 1, chloroplastic OS=Arabidopsis thaliana
GN=PGK1 PE=1 SV=1
Length = 481
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P+AAI+GG + +K + L +CD L+ G M F A GL V LVE+ +
Sbjct: 266 KRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLEL 325
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVE 120
A++L+ A+ K +++L P D P+ +I P+ GI DGW +DIGP S++
Sbjct: 326 ATELLAKAKAKGVSLLLPTDVVVADKFAPDANSKIVPASGIEDGWMGLDIGPDSIK 381
>sp|B0JT86|PGK_MICAN Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843)
GN=pgk PE=3 SV=1
Length = 402
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 8/156 (5%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAIIGG + +K + L +CD L+ G M F A GL V LVE+ +
Sbjct: 192 QRPLAAIIGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLEL 251
Query: 66 ASDLIQFARDKHITILYPKD-FWCTKIHHPNQVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A L A++K + L P D K + +I IPDGW +DIGP SV+
Sbjct: 252 AKSLEAKAKEKGVEFLLPTDVVLADKFDKDAESQIVKVENIPDGWMGLDIGPESVKVFQE 311
Query: 125 TITKCKAF-------PFDIDWSAAYHDPAQPLVVDI 153
++ CK+ F+ D AA D + D+
Sbjct: 312 ALSNCKSVLWNGPMGVFEFDKFAAGTDAIAHTLADL 347
>sp|Q31P73|PGK_SYNE7 Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC
7942) GN=pgk PE=3 SV=1
Length = 402
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAI+GG + +K + L +CD L+ G M F A GL V LVE+ D
Sbjct: 191 QRPLAAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDL 250
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A L+ A++K + +L P D P+ + IPDGW +DIGP SV++
Sbjct: 251 ARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEE 310
Query: 125 TITKCKA 131
+ C++
Sbjct: 311 ALADCRS 317
>sp|P50318|PGKH2_ARATH Phosphoglycerate kinase 2, chloroplastic OS=Arabidopsis thaliana
GN=At1g56190 PE=1 SV=3
Length = 478
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P+AAI+GG + +K + L +CD L+ G M F A GL V LVE+ +
Sbjct: 263 KRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLEL 322
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVE 120
A+ L+ A+ + +++L P D P+ +I P+ IPDGW +DIGP SV+
Sbjct: 323 ATTLLAKAKARGVSLLLPTDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSVK 378
>sp|Q5N4Z6|PGK_SYNP6 Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=pgk PE=3 SV=1
Length = 402
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAI+GG + +K + L +CD L+ G M F A GL V LVE+ D
Sbjct: 191 QRPLAAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDL 250
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A L+ A++K + +L P D P+ + IPDGW +DIGP SV++
Sbjct: 251 ARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEG 310
Query: 125 TITKCKA 131
+ C++
Sbjct: 311 ALADCRS 317
>sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2
SV=1
Length = 480
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P+AAI+GG + +K + L +CD L+ G M F A GL V LVE+ +
Sbjct: 262 KRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLEL 321
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVE 120
A+ L+ A+ K +++L P D P+ + P+ IPDGW +DIGP SV+
Sbjct: 322 ATSLLAKAKAKGVSLLLPSDVIIADKFAPDANSQTVPASAIPDGWMGLDIGPDSVK 377
>sp|Q0IDB0|TRMB_SYNS3 tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain
CC9311) GN=trmB PE=3 SV=1
Length = 237
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 142 YHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFI 201
+ P P+ +DIG G FLL +A + + N LG+E+ LV + N +F+
Sbjct: 25 FEHPNLPIHLDIGCARGFFLLELAAMQPERNHLGVEIRRPLVQAAQHDRDRQEQHNLHFL 84
Query: 202 ATNATSTFRSIVASY-PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGK- 259
NA + + +A+ P +L LVSIQ P+P F + HR R V + + +H G+
Sbjct: 85 FCNANISLEAWMAALPPDQLQLVSIQFPDPWFKQ-RHRKRRVLQPALLLAIAAALHPGRH 143
Query: 260 VFLQSDIEEVMLRMKQQFLEYGKGKLVLVQ-DEC--DTKTNQGGWLGENSFGVRSDWEQH 316
+FLQSD+ V+ M + LV+ C K + W N V ++ E++
Sbjct: 144 LFLQSDVLAVIEPM-----------VALVELSNCFARPKDDPQPWRSSNPLPVATERERY 192
Query: 317 VIDRGAPMYRLMLSK 331
V ++G P YR++ +
Sbjct: 193 VQEQGQPTYRVLFER 207
>sp|A7HL11|PGK_FERNB Phosphoglycerate kinase OS=Fervidobacterium nodosum (strain ATCC
35602 / DSM 5306 / Rt17-B1) GN=pgk PE=3 SV=1
Length = 400
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
+KPY ++GG + +K + L ++ D +I G M F ALG LVE+ D
Sbjct: 186 DKPYVVVLGGAKVSDKIGVITNLLNKADKIIIGGAMMFTFWRALGKQTGNSLVEEDKIDL 245
Query: 66 ASDLIQFARDKHITILYPKDFWCT-KIHHPNQVEIFP-SHGIPDGWEPVDIGPRSVEEIT 123
A L++ A++K + ++ P D C K+ + ++F GIP+GW DIGP S+E I
Sbjct: 246 AKQLLEQAKEKGVELVIPTDAVCAQKMEAGVEKKVFTCEEGIPEGWAGYDIGPASIELIK 305
Query: 124 STITKCKAF 132
S + K
Sbjct: 306 SKLADAKTI 314
>sp|Q7U9H3|TRMB_SYNPX tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain
WH8102) GN=trmB PE=3 SV=1
Length = 236
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 142 YHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHC-RDSLQLSGITNGYF 200
+ P QP+ +DIG G +LG+A N LG+E+ LVT RD+L SG N
Sbjct: 25 FDHPEQPIHLDIGCARGRCILGLAELNPGWNHLGVEIRRPLVTAADRDALN-SGSGNVRV 83
Query: 201 IATNATSTFRSIVASYPG-KLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGK 259
+ NA + S +A+ P +L VS+Q P+P F R HR R V + + + G+
Sbjct: 84 LFCNANISLESWLAALPNDRLQRVSVQFPDPWFKR-RHRKRRVLQPALLLAIAAALQPGR 142
Query: 260 -VFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWEQHVI 318
+FLQSD+ V+ + + + + E D + W +N V ++ EQ+V+
Sbjct: 143 ELFLQSDVLAVI----EPMVALTELSGCFTRPESDARP----WRADNPLPVPTEREQYVL 194
Query: 319 DRGAPMYRLMLSK 331
++ P+YR++ +
Sbjct: 195 EKNLPVYRVLYRR 207
>sp|Q7V4W7|TRMB_PROMM tRNA (guanine-N(7)-)-methyltransferase OS=Prochlorococcus marinus
(strain MIT 9313) GN=trmB PE=3 SV=1
Length = 236
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
Query: 146 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNA 205
++PL +DIG G FLL +A + + N +G+E+ LV Q + N F+ N
Sbjct: 29 SRPLHLDIGCARGGFLLSLAPLQPEWNHVGVEIRHPLVLSAERDRQELELDNLRFLFCNV 88
Query: 206 TSTFRSIVASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 264
+ + + P +L VSIQ P+P F R + R++Q SL+ A++ L ++F+QS
Sbjct: 89 NVSLEEWLDALPRDQLQWVSIQFPDPWFKRRHQKRRVLQPSLLIALATALQPGRELFIQS 148
Query: 265 DIEEVMLRMKQQFLEYGKGKLVLVQDEC--DTKTNQGGWLGENSFGVRSDWEQHVIDRGA 322
D+ V+ M +++ Q C K + W N V ++ E++V+D+G
Sbjct: 149 DVLSVIEPM----------VMLIEQSNCFERPKNDSHAWQKANPLPVPTERERYVLDQGL 198
Query: 323 PMYRLMLSK 331
+YR + +
Sbjct: 199 QVYRRLYQR 207
>sp|A6LMG3|PGK_THEM4 Phosphoglycerate kinase OS=Thermosipho melanesiensis (strain BI429
/ DSM 12029) GN=pgk PE=3 SV=1
Length = 402
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
EKPY I+GG + +K + L ++ D ++ G M F + ALG V LVE+ D
Sbjct: 186 EKPYVVILGGAKVSDKIGVITNLLNKADKILIGGAMMFTFLKALGKNVGSSLVEEDKLDL 245
Query: 66 ASDLIQFARDKHITILYPKDFWCT-KIHHPNQVEIFP-SHGIPDGWEPVDIGPRSVEEIT 123
A +++ A++K + + P D C KI + + F + GIP+GW +DIGP S++
Sbjct: 246 AKRILEEAKEKGVEFVLPVDAVCAQKIESGVETKTFRINDGIPEGWMGLDIGPESIKLFK 305
Query: 124 STITKCKAF 132
I+ K
Sbjct: 306 EKISGAKTI 314
>sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1
Length = 401
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
+KP+AAI+GG + +K + L + D L+ G M F A G V LVE+ D
Sbjct: 191 QKPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGYAVGSSLVEEDKLDL 250
Query: 66 ASDLIQFARDKHITILYPKDFWCT-KIHHPNQVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A+ L++ A+ K +++L P D K ++ P+ IPDGW +DIGP +++ S
Sbjct: 251 ATSLMEKAKAKGVSLLLPTDVVIADKFAADANSKVVPASEIPDGWMGLDIGPDAIKSFGS 310
Query: 125 TITKCK 130
+ K
Sbjct: 311 ALDTTK 316
>sp|A2CCG0|TRMB_PROM3 tRNA (guanine-N(7)-)-methyltransferase OS=Prochlorococcus marinus
(strain MIT 9303) GN=trmB PE=3 SV=1
Length = 236
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
Query: 146 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNA 205
++PL +DIG G FLLG+A + + N +G+E+ LV Q + N F+ N
Sbjct: 29 SRPLHLDIGCARGGFLLGLAPLQPEWNHVGVEIRHPLVLSAERDRQELKLDNLRFLFCNV 88
Query: 206 TSTFRSIVASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 264
+ + + P +L VSIQ P+P F R + R++Q SL+ A++ L ++F+QS
Sbjct: 89 NVSLEEWLDALPRDQLQWVSIQFPDPWFKRRHQKRRVLQPSLLIALATALQPGRELFIQS 148
Query: 265 DIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQG--GWLGENSFGVRSDWEQHVIDRGA 322
D+ V+ M +++ Q C + W N V ++ E++V+D+G
Sbjct: 149 DVLSVIEPM----------VMLIEQSNCFKRPGDDFHPWQRTNPMPVPTERERYVLDQGL 198
Query: 323 PMYRLMLSK 331
+YR + +
Sbjct: 199 QVYRRLYQR 207
>sp|Q9Z7M5|PGK_CHLPN Phosphoglycerate kinase OS=Chlamydia pneumoniae GN=pgk PE=3 SV=1
Length = 402
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P+ AI+GG + +K + L ++ D L+ G M F + ALG + LVEK A D
Sbjct: 192 KRPFTAILGGAKISSKIGVIEALLNQVDYLLLAGGMGFTFLQALGKSLGNSLVEKSALDL 251
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPNQVEIFP-SHGIPDGWEPVDIGPRSVEEITS 124
A ++++ A+ +++TI+ P D + + + GIP + DIGPR+ EE
Sbjct: 252 ARNVLKIAKSRNVTIVLPSDVKAAENLQSKEYSVISIDQGIPPHLQGFDIGPRTTEEFIR 311
Query: 125 TITKC 129
I +
Sbjct: 312 IINQS 316
>sp|B0CD95|PGK_ACAM1 Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017)
GN=pgk PE=3 SV=1
Length = 401
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAI+GG + +K + L + D L+ G M F A GL V LVE+ D
Sbjct: 191 QRPLAAIVGGSKVSSKIGVIETLLDKVDKLLIGGGMIFTFYKARGLAVGKSLVEEDKLDL 250
Query: 66 ASDLIQFARDKHITILYPKDFWC-TKIHHPNQVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A L A++K + +L P D + + IPDGW +DIGP SV+E +
Sbjct: 251 ARTLEAKAKEKGVALLLPSDVVVADNFAADANAQTVSINNIPDGWMGLDIGPNSVKEFQA 310
Query: 125 TITKCK 130
++ CK
Sbjct: 311 ALSDCK 316
>sp|Q3AVX6|PGK_SYNS9 Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9902) GN=pgk
PE=3 SV=1
Length = 401
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAI+GG + +K L L +CD ++ G M F A GL V LVE+ +
Sbjct: 191 KRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLAVGKSLVEEDKLEL 250
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A +L A+ K + +L P D P+ +I IPDGW +DIGP +++ +
Sbjct: 251 AKELEAKAKAKGVELLLPTDVVLADNFAPDANSQIADVTAIPDGWMGLDIGPDAIKVFQA 310
Query: 125 TITKCKAF-------PFDIDWSAAYHDPAQPLVVDIG 154
+ CK F+ D AA + + +IG
Sbjct: 311 ALADCKTVIWNGPMGVFEFDKFAAGTNAIATTLAEIG 347
>sp|B7IDG7|PGK_THEAB Phosphoglycerate kinase OS=Thermosipho africanus (strain TCF52B)
GN=pgk PE=3 SV=1
Length = 402
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
EKPY ++GG + +K + L + D ++ G M F + +LG V LVE D
Sbjct: 186 EKPYVVVLGGAKVSDKIGVITNLLDKADKILIGGAMMFTFLKSLGYNVGSSLVEDDKLDL 245
Query: 66 ASDLIQFARDKHITILYPKDFWCT-KIHHPNQVE-IFPSHGIPDGWEPVDIGPRSVEEIT 123
A +++ A++K I+ P D C KI + + I G+P+GW +DIGP++VE
Sbjct: 246 AKRILEQAKEKGTEIVLPVDTVCAQKIEAGVETKTIDIKDGLPEGWMGLDIGPKTVELFR 305
Query: 124 STITKCKAF 132
++I+ K
Sbjct: 306 NSISGAKTI 314
>sp|Q0I6M5|PGK_SYNS3 Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk
PE=3 SV=1
Length = 402
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAI+GG + +K L L +CD ++ G M F A GL V LVE+ +
Sbjct: 191 KRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLAVGKSLVEEDKLEL 250
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A +L A+ K + +L P D P+ ++ IPDGW +DIGP +++ +
Sbjct: 251 AKELEAKAKAKGVELLLPTDVLLADNFAPDANSQVADVTAIPDGWMGLDIGPDAIKVFQA 310
Query: 125 TITKCK 130
+ CK
Sbjct: 311 ALADCK 316
>sp|Q8YPR1|PGK_NOSS1 Phosphoglycerate kinase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=pgk PE=1 SV=1
Length = 400
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAIIGG + +K + L +CD LI G M F A GL V LVE+ +
Sbjct: 190 QRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLEL 249
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A L A+++ +++L P D P+ + IPDGW +DIGP SV+ +
Sbjct: 250 AKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKVFQA 309
Query: 125 TITKCK 130
+ K
Sbjct: 310 ALADTK 315
>sp|P74421|PGK_SYNY3 Phosphoglycerate kinase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pgk PE=3 SV=2
Length = 401
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AI+GG + +K + L +CD LI G M F A GL LVE+ D
Sbjct: 191 KRPLVAIVGGSKVSSKIGVIETLLDKCDKLIIGGGMIFTFYKAQGLNTGKSLVEEDKLDL 250
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A L+ A++K + L P D P+ + IPDGW +DIGP SV+
Sbjct: 251 AKSLMAKAKEKGVEFLLPTDVVVADNFAPDANAQTVGVDAIPDGWMGLDIGPDSVKTFQD 310
Query: 125 TITKC 129
+ C
Sbjct: 311 ALAGC 315
>sp|Q2JXF0|PGK_SYNJA Phosphoglycerate kinase OS=Synechococcus sp. (strain JA-3-3Ab)
GN=pgk PE=3 SV=1
Length = 412
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 8/166 (4%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAIIGG + K + L + D L+ G M F A G+P LVE D
Sbjct: 202 QRPLAAIIGGSKVSTKIGVIERLLEKVDKLLLGGGMIFTFYQAQGIPTGKSLVETDKLDL 261
Query: 66 ASDLIQFARDKHITILYPKDFWCT-KIHHPNQVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A L++ A+ + + +L P D + + H IP+ W +DIGP SV+ +
Sbjct: 262 ARSLMEKAKARGVELLLPVDVVVADRFDKDANAQTVSIHAIPEDWMGLDIGPESVKAFQA 321
Query: 125 TITKCKAF-------PFDIDWSAAYHDPAQPLVVDIGSGNGLFLLG 163
+ CK F+ D AA + + D+ + ++G
Sbjct: 322 ALQGCKTVVWNGPMGVFEFDRFAAGTEAIARTLADLTQAGAITIIG 367
>sp|B7K9Q5|PGK_CYAP7 Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk
PE=3 SV=1
Length = 401
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAIIGG + +K + L +CD L+ G M F A GL V LVE+ +
Sbjct: 191 QRPLAAIIGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLEL 250
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPNQVE-IFPSHGIPDGWEPVDIGPRSVEEITS 124
A L A +K + +L P D N + IPDGW +DIGP SV+
Sbjct: 251 AKSLEAKASEKGVQLLLPTDVVVADAFDANANDKTVKIEEIPDGWMGLDIGPDSVKLFQD 310
Query: 125 TITKCKA 131
+ CK+
Sbjct: 311 ALADCKS 317
>sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii
PE=1 SV=1
Length = 461
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P+ AI+GG + +K + L +CD +I G M F A L V LVE +
Sbjct: 251 KRPFVAIVGGSKVSSKITVIEALMEKCDKIIIGGGMIFTFYKARALKVGSSLVEDDKIEL 310
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A L + A+ K + +L P D N + P IPDGW +DIGP SV+
Sbjct: 311 AKKLEEMAKAKGVQLLLPTDVVVADKFDANANTQTVPITAIPDGWMGLDIGPDSVKTFND 370
Query: 125 TITKCK 130
+ K
Sbjct: 371 ALADAK 376
>sp|A5IJ98|PGK_THEP1 Phosphoglycerate kinase OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=pgk PE=3 SV=1
Length = 399
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
EKPY ++GG + +K + L + D ++ G M F + ALG V VE+ D
Sbjct: 186 EKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDL 245
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHP--NQVEIFPSHGIPDGWEPVDIGPRSVEEIT 123
A +L++ A++K + I+ P D + P + + GIP+GW +DIGP +VE
Sbjct: 246 AKELLEKAKEKGVEIVLPVDTVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETVELFK 305
Query: 124 STITKCK 130
++ K
Sbjct: 306 QKLSDAK 312
>sp|Q7V350|TRMB_PROMP tRNA (guanine-N(7)-)-methyltransferase OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=trmB PE=3
SV=1
Length = 209
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 134 FDID----WSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDS 189
F+ID + + +P PL +DIG +G FL ++ K K+ N++G+E+ KLV +
Sbjct: 13 FEIDPIPPLNQVFENPKLPLHLDIGCASGEFLFELSLKNKNWNYIGIEIREKLVLNANLK 72
Query: 190 LQLSGITNGYFIATNATSTFRSIVASYPGKLIL-VSIQCPNPDFNRPEHRWRMVQRSLVE 248
++ N YF NA + F LI +S P+P F + H+ R++Q L+
Sbjct: 73 MKSRENKNLYFSFGNANNIFNQTNNKSIINLITSISFNFPDPWFKKKHHKRRVIQPKLLN 132
Query: 249 AVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQD 290
+S+ + +F+++D+ ++ M+ E K K + QD
Sbjct: 133 LLSNSMKKGSLIFIKTDVRDLFDHMELTISESIKFKKIPYQD 174
>sp|P36204|PGKT_THEMA Bifunctional PGK/TIM OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=pgk/tpi PE=1 SV=4
Length = 654
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
EKPY ++GG + +K + L + D ++ G M F + ALG V VE+ D
Sbjct: 186 EKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDL 245
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHP--NQVEIFPSHGIPDGWEPVDIGPRSVEEIT 123
A +L++ A++K + I+ P D + P + + GIP+GW +DIGP ++E
Sbjct: 246 AKELLEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFK 305
Query: 124 STITKCKAF-------PFDIDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGL 176
++ K F+ID A + + + ++G +N GL
Sbjct: 306 QKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGL 365
Query: 177 E 177
E
Sbjct: 366 E 366
>sp|B1L8B8|PGK_THESQ Phosphoglycerate kinase OS=Thermotoga sp. (strain RQ2) GN=pgk PE=3
SV=1
Length = 399
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
EKPY ++GG + +K + L + D ++ G M F + ALG V VE+ D
Sbjct: 186 EKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDL 245
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHP--NQVEIFPSHGIPDGWEPVDIGPRSVEEIT 123
A +L++ A++K + I+ P D + P + + GIP+GW +DIGP +VE
Sbjct: 246 AKELLEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETVELFK 305
Query: 124 STITKCK 130
++ K
Sbjct: 306 QKLSDAK 312
>sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=pgk PE=3 SV=1
Length = 400
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAIIGG + +K + L +CD LI G M F A GL V LVE+ +
Sbjct: 190 QRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLEL 249
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A L A+++ +++L P D P+ + IPDGW +DIGP SV+
Sbjct: 250 AKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIDNIPDGWMGLDIGPDSVKVFQE 309
Query: 125 TITKCK 130
+ K
Sbjct: 310 ALADTK 315
>sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK
PE=2 SV=1
Length = 462
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P+ AI+GG + +K + L +CD +I G M F A GL V LVE+ +
Sbjct: 252 KRPFVAIVGGSKVSSKITVIEKLMEKCDKIIIGGGMIFTFYKARGLKVGSSLVEEDKLEL 311
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A +L A+ K + +L P D N + IPDGW +DIGP S++
Sbjct: 312 AKNLEAIAKAKGVQLLLPSDVVVADKFDANANTQTVSVEAIPDGWMGLDIGPDSIKTFQD 371
Query: 125 TITKCK 130
+ K
Sbjct: 372 ALADAK 377
>sp|B2ITU1|PGK_NOSP7 Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=pgk PE=3 SV=1
Length = 400
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAIIGG + +K + L +CD LI G M F A GL V LVE+ +
Sbjct: 190 QRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLSVGKSLVEEDKLEL 249
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A L A+++ + +L P D P+ + IPDGW +DIGP SV+
Sbjct: 250 AKSLEAKAKERGVALLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKFFQE 309
Query: 125 TITKCK 130
+ K
Sbjct: 310 ALADTK 315
>sp|Q8FT66|PGK_COREF Phosphoglycerate kinase OS=Corynebacterium efficiens (strain DSM
44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=pgk PE=3 SV=1
Length = 405
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 1 MAKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEK 60
+A+ E PY ++GG + +K + LAS+ D +I G M + + A G V +++
Sbjct: 192 IAENPEAPYTVVLGGSKVSDKLGVIEALASKADSIIIGGGMCYTFLKAQGHDVQKSMLQD 251
Query: 61 GANDAASDLIQFARDKHITILYPKDF-WCTKIHHPNQVEIFPSHGIPDGWEPVDIGPRSV 119
D DL++ DK I+ P D W ++ + ++ P+GW +DIGP+SV
Sbjct: 252 EMIDTCKDLLERFGDK---IVLPVDLTWASEFAKDAEKKVTDLDSAPEGWLSLDIGPKSV 308
Query: 120 EEITSTITKCKAF----PFDIDWSAAYHDPAQPL---VVDIGSGNGLF-LLGMARKRKDL 171
E+ + K P + A+ D + + ++D + NG F ++G +
Sbjct: 309 EKFADVLGASKTIFWNGPMGVFEFEAFSDGTRGVAQAIIDATANNGAFSVVGGGDSAASV 368
Query: 172 NFLGLEVNG 180
LGL+ G
Sbjct: 369 RVLGLDEEG 377
>sp|Q7VDZ4|PGK_PROMA Phosphoglycerate kinase OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=pgk PE=3 SV=1
Length = 402
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 6 EKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDA 65
++P AAI+GG + +K L L +CD ++ G M F A GL V LVE D
Sbjct: 191 QRPLAAIVGGSKVSSKIGVLESLIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEDDKLDL 250
Query: 66 ASDLIQFARDKHITILYPKDFWCTKIHHPN-QVEIFPSHGIPDGWEPVDIGPRSVEEITS 124
A L + A++K + +L P D P+ ++ IP+GW +DIG SV+
Sbjct: 251 ARALEKKAKEKGVQLLLPSDVVLADNFSPDASSQMVQIDSIPEGWMGLDIGKESVKLFQD 310
Query: 125 TITKCK 130
+ CK
Sbjct: 311 ALADCK 316
>sp|A2BUM1|TRMB_PROM5 tRNA (guanine-N(7)-)-methyltransferase OS=Prochlorococcus marinus
(strain MIT 9515) GN=trmB PE=3 SV=1
Length = 209
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 86/166 (51%), Gaps = 13/166 (7%)
Query: 134 FDID----WSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDS 189
F+ID + + +P PL +DIG +G FL+ ++ K K+ N++G+E+ KLV +
Sbjct: 13 FEIDPIPPLNEVFENPQLPLHLDIGCASGDFLMELSLKNKNWNYIGIEIREKLVLNANLK 72
Query: 190 LQLSGITNGYFIATNATSTFRSIVASYPGKLIL-----VSIQCPNPDFNRPEHRWRMVQR 244
++ N YF NA +I+ + K ++ +S P+P F + H+ R++Q
Sbjct: 73 IKNREYKNVYFSFGNAI----NILNNTNNKTLIDAITSISFYFPDPWFKKKHHKRRVIQP 128
Query: 245 SLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQD 290
+ +S+ + +F+++D++E+ M+ LE K K + +D
Sbjct: 129 EFINLLSNAMRTRSLIFIKTDVQELFEYMELTILESLKFKKLAYED 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,135,882
Number of Sequences: 539616
Number of extensions: 5521577
Number of successful extensions: 14032
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 313
Number of HSP's that attempted gapping in prelim test: 12578
Number of HSP's gapped (non-prelim): 1220
length of query: 336
length of database: 191,569,459
effective HSP length: 118
effective length of query: 218
effective length of database: 127,894,771
effective search space: 27881060078
effective search space used: 27881060078
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)