BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019747
(336 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/335 (68%), Positives = 276/335 (82%), Gaps = 4/335 (1%)
Query: 1 METNESSYVPSPDVHGKRSTAPV-KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIND 59
ME+ ESSYV SP+ K + +P KS S D EKPTYIRFLVSN AG+VIGKGGSTI D
Sbjct: 1 MESTESSYVSSPEGPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITD 60
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
FQSQSGARIQLSR+HEFFPGTTDRIIM+SG I+EI RAV+L++ KLL+ELH+ED +D
Sbjct: 61 FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDD-NDAE 119
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
KTK+RL+VPN SCG IIGK GATI+SF++DSQA IKIS D++YYG NDRLVTLTG+ D
Sbjct: 120 PKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFD 179
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
EQMRA+ELI+ KLSED Y+Q+M P++Y GV+FSG+ G+PY V P V A P A +Y
Sbjct: 180 EQMRAIELIVSKLSEDPHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSV-APPAYNAVNY 238
Query: 240 GPN-MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
PN G K QN+K++R+NSLT+GVADEHIG VVGRGGRNIMEISQ SGARIK+SDRGD+
Sbjct: 239 RPNGAAGGKLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDY 298
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
SGT++RKVTI+G QR+IRTAESMI+QKVAYA++R
Sbjct: 299 VSGTTDRKVTITGSQRAIRTAESMILQKVAYATER 333
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/335 (67%), Positives = 273/335 (81%), Gaps = 4/335 (1%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSS-DPTEKPTYIRFLVSNPLAGAVIGKGGSTIND 59
ME+ ESSYV SP+ K + +P S D EKPTYIRFLVSN AG+VIGKGGSTI D
Sbjct: 1 MESTESSYVSSPEGPRKHAASPPPKPPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITD 60
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
FQSQSGARIQLSR+HEFFPGTTDRIIM+SG I+EI RAV+L++ KLL+ELH+ED +D
Sbjct: 61 FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDD-NDAE 119
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
KTK+RL+VPN SCG IIGK G TI+SF++DSQA IKIS D++YYG NDRLV LTGT D
Sbjct: 120 PKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDNNYYGQNDRLVMLTGTFD 179
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
EQMRA+ELI+ KL+ED Y+Q+M P++Y GV+FSG+ G+PY V P V A P A +Y
Sbjct: 180 EQMRAIELIVSKLAEDPHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSV-APPAYNAVNY 238
Query: 240 GPN-MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
PN G K QN+K++R+NSLT+GVADEHIG VVGRGGRNIMEISQ+SGARIK+SDRGD+
Sbjct: 239 RPNGTAGGKLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQVSGARIKISDRGDY 298
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
SGT++RKVTI+G QR+IRTAESMI+QKVAYA++R
Sbjct: 299 ISGTTDRKVTITGSQRAIRTAESMILQKVAYATER 333
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/337 (65%), Positives = 273/337 (81%), Gaps = 7/337 (2%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDP---TEKPTYIRFLVSNPLAGAVIGKGGSTI 57
ME+ ESSYV SP+ G R A S EKPTY+RFLVSN AG+VIGKGGSTI
Sbjct: 1 MESPESSYVSSPE--GPRKHASSPPPDSPSQDSVEKPTYVRFLVSNSAAGSVIGKGGSTI 58
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
DFQSQSGARIQLSR++EFFPGTTDRIIM+SG I+E+LRAV+L++ KLL+ELH+ED +D
Sbjct: 59 TDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLRAVELILSKLLSELHSEDD-ND 117
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
V KTK+RLIVPN SCG IIGK GATI+SF+++SQA IKIS D+SYYG NDR+VT+TGT
Sbjct: 118 VEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSYYGQNDRIVTVTGT 177
Query: 178 LDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
LDEQMR ++LI+ KL+ED YS +M+ P+TY+G + SG+ G+PY V P V A P
Sbjct: 178 LDEQMRGIDLIVSKLAEDPHYSHSMSSPFTYSGAYVSGYQGVPYTYVLPSV-APPAYNGV 236
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD 297
+Y PN G KFQN+K+DR+NS+TIGVADEHIG VVGRGGRNI +ISQ SGA+IK+SDRGD
Sbjct: 237 NYRPNGTGAKFQNSKEDRSNSMTIGVADEHIGLVVGRGGRNISDISQTSGAKIKISDRGD 296
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
+ SGT++RKVTI+G QR+IRTAESMI+QKVAYA++R+
Sbjct: 297 YISGTTDRKVTITGSQRAIRTAESMILQKVAYATERV 333
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/336 (65%), Positives = 270/336 (80%), Gaps = 2/336 (0%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ESSYV SP+ KRS P S SD EKPTY RFLVSN AG+VIGKGG+TI DF
Sbjct: 1 MESTESSYVSSPEQPQKRSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITDF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
QSQSGARIQLSR++EFFPGT+DRIIM+SG ID++L+AV+L+I KLL+E+ AED D+
Sbjct: 61 QSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAED-GDEAEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ ++RL+VPNS+CGSIIGK G+ IKSF+++S A IKIS LD ++GL DRLVT+TGTL+E
Sbjct: 120 RMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QM A++LIL KL++D YSQTM P++YAGVFFSGF G+ Y V P V +N+ H G
Sbjct: 180 QMHAIDLILSKLTDDPHYSQTMHAPFSYAGVFFSGFDGIQYACVLPYVATAAYNSMNH-G 238
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
PN KFQ+NKDD TNS+TIGVADEHIG VVGRGGRNIMEISQ SGAR+K+SDRGDF S
Sbjct: 239 PNGAAVKFQHNKDDITNSVTIGVADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMS 298
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
GT++RK+TI+G QR+IR AE MIMQKV+YAS+R D
Sbjct: 299 GTTDRKITITGSQRAIRAAEDMIMQKVSYASERETD 334
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/336 (61%), Positives = 270/336 (80%), Gaps = 2/336 (0%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ES SP+ KRS P S +D EKPT+IRFLVSN AG+VIGKGGSTI +F
Sbjct: 1 MESTESYAAASPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q++SGARIQLSR+ EFFPGTTDRIIMISG+I E++ ++L++DKL +ELHAED ++V
Sbjct: 61 QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVINGLELILDKLHSELHAED-GNEVEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ ++RL+VPNSSCG IIGK GATIKSF+++S+A IKIS LD+++YGL+DRLVTL+GT +E
Sbjct: 120 RRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QMRA++LIL KL+ED YSQ + PY+YAG+F+SGFHG PY P V +N+ +Y
Sbjct: 180 QMRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNS-VNYA 238
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
PN G K+QN+KD+ + ++TIGVADEHIG V+GRGGRNIMEI+QI+GARIK+SDRGDF S
Sbjct: 239 PNGSGGKYQNHKDEASTTVTIGVADEHIGLVLGRGGRNIMEITQITGARIKISDRGDFMS 298
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
GT++RKV+I+GPQR+I+ AE+MI QKV A++R D
Sbjct: 299 GTTDRKVSITGPQRAIQQAETMIKQKVDSATERATD 334
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/336 (61%), Positives = 270/336 (80%), Gaps = 2/336 (0%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ES SP+ KRS P S +D EKPT+IRFLVSN AG+VIGKGGSTI +F
Sbjct: 1 MESTESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q++SGARIQLSR+ EFFPGTTDRIIMISG+I E++ ++L++DKL +ELHAED ++V
Sbjct: 61 QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAED-GNEVEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ ++RL+VPNSSCG IIGK GATIKSF+++S+A IKIS LD+++YGL+DRLVTL+GT +E
Sbjct: 120 RRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QMRA++LIL KL+ED YSQ + PY+YAG+F+SGFHG PY P V +N+ +Y
Sbjct: 180 QMRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNS-VNYA 238
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
PN G K+QN+K++ + ++TIGVADEHIG V+GRGGRNIMEI+Q++GARIK+SDRGDF S
Sbjct: 239 PNGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMS 298
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
GT++RKV+I+GPQR+I+ AE+MI QKV A++R D
Sbjct: 299 GTTDRKVSITGPQRAIQQAETMIKQKVDSATERTTD 334
>gi|359486525|ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/333 (64%), Positives = 263/333 (78%), Gaps = 24/333 (7%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ES+YV SP+V KRS+ P +S +SD EK TYIRFLVSN AG+VIGKGGSTINDF
Sbjct: 1 MESPESAYVSSPEVPPKRSSPP-RSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDF 59
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
QSQSGARIQLSR+HEFFPGT+DRIIMISG +EI++A++L++ KLL+E+H ED D+
Sbjct: 60 QSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTED-GDEADP 118
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
++K+RLIVPNSSCG IIGK G+TIKSF++DSQA IKIS D++Y GL DRLVTL G+L+E
Sbjct: 119 RSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEE 178
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QMRA++LIL KL+ED Y+Q M P++YA + S +YG
Sbjct: 179 QMRAIDLILSKLTEDPHYTQFMNAPFSYAAAYNS----------------------MNYG 216
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
PN G KFQNNK+DR+NS+TIGVADEHIG VVGRGGRNIM+ISQ SGARIK+SDRGDF S
Sbjct: 217 PNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMS 276
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
GT++RKVTI+G QR+IR AESMIMQKVA AS+R
Sbjct: 277 GTTDRKVTITGSQRAIRAAESMIMQKVASASER 309
>gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/333 (64%), Positives = 263/333 (78%), Gaps = 24/333 (7%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ES+YV SP+V KRS+ P +S +SD EK TYIRFLVSN AG+VIGKGGSTINDF
Sbjct: 49 MESPESAYVSSPEVPPKRSSPP-RSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDF 107
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
QSQSGARIQLSR+HEFFPGT+DRIIMISG +EI++A++L++ KLL+E+H ED D+
Sbjct: 108 QSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTED-GDEADP 166
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
++K+RLIVPNSSCG IIGK G+TIKSF++DSQA IKIS D++Y GL DRLVTL G+L+E
Sbjct: 167 RSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEE 226
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QMRA++LIL KL+ED Y+Q M P++YA + S +YG
Sbjct: 227 QMRAIDLILSKLTEDPHYTQFMNAPFSYAAAYNS----------------------MNYG 264
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
PN G KFQNNK+DR+NS+TIGVADEHIG VVGRGGRNIM+ISQ SGARIK+SDRGDF S
Sbjct: 265 PNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMS 324
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
GT++RKVTI+G QR+IR AESMIMQKVA AS+R
Sbjct: 325 GTTDRKVTITGSQRAIRAAESMIMQKVASASER 357
>gi|255583738|ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding protein, putative [Ricinus communis]
Length = 314
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/337 (63%), Positives = 264/337 (78%), Gaps = 24/337 (7%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSL-SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIND 59
ME+ ESSYV SP+ ++ + P +SD EKPTY+RFLVSN AG+VIGKGG+TI D
Sbjct: 1 MESTESSYVSSPEAPPRKRSPPPPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITD 60
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
FQSQSGARIQLSR++EFFPGT+DRII+ISG +D++L+ V+LV+ KLL+ELH ED DDV
Sbjct: 61 FQSQSGARIQLSRNYEFFPGTSDRIILISGILDDVLKGVELVLAKLLSELHTED-GDDVD 119
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+TK+RL+VPNSSCGSIIGK G+ IKSF+++SQA IKIS D+++YGLNDRLVT+TGTL+
Sbjct: 120 PRTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLE 179
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
EQMRA++LIL KL +D Y QTM P++YA V +N+ +Y
Sbjct: 180 EQMRAIDLILSKLYDDPHYVQTMHAPFSYA---------------------VAYNSM-NY 217
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
G N G KFQNNK+DRTNS+TIGVAD HIG VVGRGGRNIMEISQ+SGARIK+SDRGDF
Sbjct: 218 GANGAGGKFQNNKEDRTNSVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFM 277
Query: 300 SGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
SGT++RK+ I+G QR+IRTAE MIMQKVAYAS+R D
Sbjct: 278 SGTNDRKIIITGSQRAIRTAEGMIMQKVAYASERGSD 314
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/345 (62%), Positives = 263/345 (76%), Gaps = 31/345 (8%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ESSYV SP+ KRS P KS +SD EK TYIRFLVSN AG+VIGKGGSTINDF
Sbjct: 1 MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
QSQSGARIQLSR+HEFFPGTTDRIIM+SG+I+EIL+A++LV+ KLL+ELHAE + DDV
Sbjct: 61 QSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAE-EGDDVEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+TK+RLIVP+SSCG+IIGK G+TIKSF++DSQA IKIS D++Y DRLVTL+GT++E
Sbjct: 120 RTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QMRA +LI+ KLSED Y+Q+M P++Y + F+ M YG+
Sbjct: 180 QMRATDLIVSKLSEDPHYTQSMNYPFSYP----TSFNAMNYGSNGGGTGG---------- 225
Query: 241 PNMGGRKFQNNKDD----------RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARI 290
+FQNNK D R NSLTIGV+D HIG VVGRGGRNI+EISQ SGARI
Sbjct: 226 ------RFQNNKPDTRSSEIVQEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARI 279
Query: 291 KVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLM 335
K+SDRGDF SGT++RKVTI+G QR+IR AESMI+QKVAYAS+R++
Sbjct: 280 KISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERVL 324
>gi|15237716|ref|NP_196063.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30 [Arabidopsis thaliana]
gi|7406447|emb|CAB85549.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21554568|gb|AAM63617.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23507775|gb|AAN38691.1| At5g04430/T32M21_30 [Arabidopsis thaliana]
gi|332003361|gb|AED90744.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 313
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/336 (58%), Positives = 256/336 (76%), Gaps = 23/336 (6%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ES SP+ KRS P S +D EKPT+IRFLVSN AG+VIGKGGSTI +F
Sbjct: 1 MESTESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q++SGARIQLSR+ EFFPGTTDRIIMISG+I E++ ++L++DKL +ELHAED ++V
Sbjct: 61 QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAED-GNEVEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ ++RL+VPNSSCG IIGK GATIKSF+++S+A IKIS LD+++YGL+DRLVTL+GT +E
Sbjct: 120 RRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QMRA++LIL KL+ED YSQ + PY+YA + S +Y
Sbjct: 180 QMRAIDLILAKLTEDDHYSQNVHSPYSYAAGYNS----------------------VNYA 217
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
PN G K+QN+K++ + ++TIGVADEHIG V+GRGGRNIMEI+Q++GARIK+SDRGDF S
Sbjct: 218 PNGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMS 277
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
GT++RKV+I+GPQR+I+ AE+MI QKV A++R D
Sbjct: 278 GTTDRKVSITGPQRAIQQAETMIKQKVDSATERTTD 313
>gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa]
Length = 313
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/336 (60%), Positives = 251/336 (74%), Gaps = 23/336 (6%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ESSYV SP+ K+S P S SD EKPTYI+ LVSN AG+VIGKGG+TI DF
Sbjct: 1 MESTESSYVSSPEQPRKKSPPPPASPLSDAVEKPTYIKLLVSNAAAGSVIGKGGATITDF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
QSQSGARIQLS+++EFFPGT+DRII+ISG ID+ L+A++L+I KLL+E+ ED DD
Sbjct: 61 QSQSGARIQLSKNYEFFPGTSDRIILISGGIDDALKALELIIAKLLSEIPTED-GDDAEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ ++RL+VPN++CGSIIGK G+ IKSF+++S A IKIS LD + GL DRLV +TGTL+E
Sbjct: 120 RMRVRLVVPNNACGSIIGKGGSIIKSFIEESHAGIKISPLDTDFLGLTDRLVAITGTLEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QM A++LIL KL++DT Y Q M P +YA + S HG+
Sbjct: 180 QMHAIDLILSKLTDDTHYLQNMHAPLSYAAAYNSTNHGL--------------------- 218
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
N G KFQ+NK+DRTNS+TIGVADEHIG VVGRGGRNIMEISQ SGARIK+SDRGDF S
Sbjct: 219 -NGAGVKFQHNKEDRTNSVTIGVADEHIGLVVGRGGRNIMEISQNSGARIKISDRGDFMS 277
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
GT++RK+TI+G QR+I AE MIMQKV+YAS+R D
Sbjct: 278 GTNDRKITITGSQRAIHAAEDMIMQKVSYASERETD 313
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/349 (57%), Positives = 253/349 (72%), Gaps = 22/349 (6%)
Query: 1 METNESSYVPSPDVHGKRS-----TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGS 55
ME S Y SP+ KR+ S D EKPT++RFLVSN AG +IGKGGS
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQPPSEEGDDKEKPTHLRFLVSNTAAGCIIGKGGS 60
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG DE+++A++L+++KLL E ++A
Sbjct: 61 TINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVMKAMELILEKLLAEGEEFNEA 120
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+ + K+RL+VPNSSCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+T
Sbjct: 121 E---ARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVT 177
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
GT D QM A++LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP+N
Sbjct: 178 GTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGLTFPNYPGVPVGYM---IPQVPYNN 234
Query: 236 AAHYGPNMG-GRKFQNNK----------DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
A +YGPN G G ++QNNK ++ SLTIG+ADEHIG VVGR GRNI EI Q
Sbjct: 235 AVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQ 294
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
SGARIK+SDRGDF SGTS+RKVTI+G +IRTAESMIMQ+V+ +S+R
Sbjct: 295 ASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSER 343
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/350 (57%), Positives = 252/350 (72%), Gaps = 22/350 (6%)
Query: 1 METNESSYVPSPDVHGKRS-----TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGS 55
ME S Y SP+ KR+ S D EKP ++RFLVSN AG +IGKGGS
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKGGS 60
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG E+++A++L+++KLL E ++A
Sbjct: 61 TINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKAMELILEKLLAEGEEFNEA 120
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+ + K+RL+VPNSSCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+T
Sbjct: 121 E---ARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVT 177
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
GT D QM A++LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP+N
Sbjct: 178 GTFDNQMNAIDLILKKLSEDVHYPANLSSPFPYAGLTFPSYPGVPVGYM---IPQVPYNN 234
Query: 236 AAHYGPNMG-GRKFQNNK----------DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
A +YGPN G G ++QNNK ++ SLTIG+ADEHIG VVGR GRNI EI Q
Sbjct: 235 AVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQ 294
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
SGARIK+SDRGDF SGTS+RKVTI+G +IRTAESMIMQ+V+ +S+RL
Sbjct: 295 ASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSERL 344
>gi|363543195|ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays]
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/350 (56%), Positives = 252/350 (72%), Gaps = 22/350 (6%)
Query: 1 METNESSYVPSPDVHGKRS-----TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGS 55
ME S Y SP+ KR+ S D EKP ++RFLVSN AG +IGKGGS
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKGGS 60
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG E+++A++L+++KLL E ++A
Sbjct: 61 TINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKAMELILEKLLAEGEEFNEA 120
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+ + K+RL+VPN+SCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+T
Sbjct: 121 E---ARPKVRLVVPNNSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVT 177
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
GT D QM A++LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP+N
Sbjct: 178 GTFDNQMNAIDLILKKLSEDVHYPANLSSPFPYAGLTFPSYPGVPVGYM---IPQVPYNN 234
Query: 236 AAHYGPNMG-GRKFQNNK----------DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
A +YGPN G G ++QNNK ++ SLTIG+ADEHIG VVGR GRNI EI Q
Sbjct: 235 AVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQ 294
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
SGARIK+SDRGDF SGTS+RKVTI+G +IRTAESMIMQ+V+ +S+RL
Sbjct: 295 ASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSERL 344
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/315 (60%), Positives = 240/315 (76%), Gaps = 16/315 (5%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D EKPT++RFLVSN AG +IGKGGSTIN+FQSQSGARIQLSRSHEFFPGT DRIIM+S
Sbjct: 35 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVS 94
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G DE+++A++L+++KLL E ++A+ + K+RL+VPNSSCG IIGK G+TIKSF+
Sbjct: 95 GLFDEVIKAMELILEKLLAEGEESNEAE---ARPKVRLVVPNSSCGGIIGKGGSTIKSFI 151
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
+DS A IKIS D+++ GL+DRLVT+TG LD QMRA+ LIL KLSED Y ++ P+ Y
Sbjct: 152 EDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPY 211
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNK----------DDRTNS 258
AG+ F + G+P G + +P VP+N A +YGPN G ++QNNK +D +S
Sbjct: 212 AGLGFPSYPGVPVGYM---IPQVPYNNAVNYGPNGYGGRYQNNKPSTPMRSPANNDAQDS 268
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
LTIG+ADEHIG VVGR GRNI EI Q SGARIK+SDRGDF +GTSERKVTI+G +I+
Sbjct: 269 LTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQA 328
Query: 319 AESMIMQKVAYASDR 333
AESMIMQ+V +S+R
Sbjct: 329 AESMIMQRVTASSER 343
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 253/350 (72%), Gaps = 23/350 (6%)
Query: 1 METNESSYVPSPDVHGKRS------TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGG 54
ME S Y SP+ KR+ S D EKPT++RFLVSN AG +IGKGG
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQQSPSEEGDDKEKPTHLRFLVSNTAAGCIIGKGG 60
Query: 55 STINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQ 114
STINDFQSQSGARIQLSRS+EFFPGT DRIIM+SG DE+++A++L+++KLL E ++
Sbjct: 61 STINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGLFDEVMKAMELILEKLLAEGEEFNE 120
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A+ + K+RL+VPNSSCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+
Sbjct: 121 AE---ARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTI 177
Query: 175 TGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHN 234
TGT D QM A++LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP++
Sbjct: 178 TGTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGLTFPSYPGVPVGYM---IPQVPYS 234
Query: 235 TAAHYGPNMG-GRKFQNNK----------DDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
A +YGPN G G ++QNNK ++ SLTIG+ADEHIG VVGR GRNI EI
Sbjct: 235 NAVNYGPNNGYGGRYQNNKPTTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEII 294
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
Q SGARIK+SDRGD+ SGTS+RKVTI+G +IRTAESMIMQ+V+ +S+R
Sbjct: 295 QASGARIKISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRVSASSER 344
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/315 (60%), Positives = 240/315 (76%), Gaps = 16/315 (5%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D EKPT++RFLVSN AG +IGKGGSTIN+FQSQSGARIQLSRSHEFFPGT DRIIM+S
Sbjct: 5 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVS 64
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G DE+++A++L+++KLL E ++A+ + K+RL+VPNSSCG IIGK G+TIKSF+
Sbjct: 65 GLFDEVIKAMELILEKLLAEGEESNEAE---ARPKVRLVVPNSSCGGIIGKGGSTIKSFI 121
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
+DS A IKIS D+++ GL+DRLVT+TG LD QMRA+ LIL KLSED Y ++ P+ Y
Sbjct: 122 EDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPY 181
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNK----------DDRTNS 258
AG+ F + G+P G + +P VP+N A +YGPN G ++QNNK +D +S
Sbjct: 182 AGLGFPSYPGVPVGYM---IPQVPYNNAVNYGPNGYGGRYQNNKPSTPMRSPANNDAQDS 238
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
LTIG+ADEHIG VVGR GRNI EI Q SGARIK+SDRGDF +GTSERKVTI+G +I+
Sbjct: 239 LTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQA 298
Query: 319 AESMIMQKVAYASDR 333
AESMIMQ+V +S+R
Sbjct: 299 AESMIMQRVTASSER 313
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S+ E +R +V N G +IGKGGSTI F S A I++S F G DR++ +
Sbjct: 88 SNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTV 147
Query: 88 SGTIDEILRAVDLVIDKLLTELH 110
+G +D +RA+ L++ KL ++H
Sbjct: 148 TGPLDHQMRAIYLILSKLSEDVH 170
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/356 (55%), Positives = 250/356 (70%), Gaps = 30/356 (8%)
Query: 1 METNESSYVPSPDVHGKRS------------TAPVKSLSSDPTEKPTYIRFLVSNPLAGA 48
ME S Y SP+ KR+ T P ++ D EKPT++RFLVSN AG
Sbjct: 1 MEAPGSPYASSPETAPKRAPRSPPPPQERPETQP-EAEPEDDKEKPTHLRFLVSNTAAGC 59
Query: 49 VIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+IGKGGSTINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG DE+++A++LV++KLL E
Sbjct: 60 IIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMELVLEKLLAE 119
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
++A+ + K RL+VPNSSCG IIGK GATIK+F++DS A IKIS D+++ GL+
Sbjct: 120 GEEFNEAE---ARPKFRLVVPNSSCGGIIGKGGATIKAFIEDSHAGIKISPQDNNFVGLH 176
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHG-MPYGAVPPP 227
DRLVT+TG + QMRA+ LIL KLSED Y ++ P+ YAG+ F + +P G +
Sbjct: 177 DRLVTITGPFNNQMRAIYLILSKLSEDVHYPPNLSSPFPYAGLGFPSYPAPVPVGYM--- 233
Query: 228 VPAVPHNTAAHYGPNMGGRKFQNNK----------DDRTNSLTIGVADEHIGFVVGRGGR 277
+P VP+N A +YGPN G ++QNNK +D S TIGVADEHIG VVGR GR
Sbjct: 234 IPQVPYNNAVNYGPNGYGGRYQNNKPGTPVRSPATNDAQESHTIGVADEHIGAVVGRAGR 293
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
NI EI Q SGARIK+SDRGDF +GTS+RKVTI+G +I+ AESMIMQ+V+ +S+R
Sbjct: 294 NITEIIQASGARIKISDRGDFIAGTSDRKVTITGTPEAIQAAESMIMQRVSASSER 349
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 236/324 (72%), Gaps = 25/324 (7%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D EKPT++RFLVSN AG +IGKGGSTINDFQSQSGARIQLSRSHEFFPGT DRIIM+S
Sbjct: 43 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 102
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G DE+++A++LV++KLL+E ++A+ + K RL+VPNSSCG IIGK GATIKSF+
Sbjct: 103 GLFDEVVKAMELVLEKLLSEGEESNEAE---ARPKFRLVVPNSSCGGIIGKGGATIKSFI 159
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
+DS A IKIS D+++ GL+DRLVT+TG L+ QMRA+ LIL KLSED Y ++ P+ Y
Sbjct: 160 EDSHAGIKISPQDNNFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYPPNLSSPFPY 219
Query: 209 AGVFFSGF-HGMPYGAVPPPVPAVPHNTAAHYGPN--------MGGRKFQNNK------- 252
AG+ F + +P G + PP VP+N +YGPN GG ++QNNK
Sbjct: 220 AGLGFPSYPAAVPVGYMIPP---VPYNNTVNYGPNGYAAPGGGGGGGRYQNNKPGTPVRS 276
Query: 253 ---DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
+D S TIGVADEHIG VVGR GRNI EI Q SGARIK+SDRGDF +GTS+RKVTI
Sbjct: 277 PANNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTI 336
Query: 310 SGPQRSIRTAESMIMQKVAYASDR 333
+G +I+ AE+MIMQ+V + +R
Sbjct: 337 TGSSEAIQAAEAMIMQRVTASQER 360
>gi|218191842|gb|EEC74269.1| hypothetical protein OsI_09495 [Oryza sativa Indica Group]
Length = 263
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/265 (55%), Positives = 194/265 (73%), Gaps = 15/265 (5%)
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
PGT DRIIM+SG DE+++A++L+++KLL E ++A+ + K+RL+VPNSSCG II
Sbjct: 5 PGTNDRIIMVSGLFDEVIKAMELILEKLLAEGEESNEAE---ARPKVRLVVPNSSCGGII 61
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GK G+TIKSF++DS A IKIS D+++ GL+DRLVT+TG LD QMRA+ LIL KLSED
Sbjct: 62 GKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVH 121
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNN------ 251
Y ++ P+ YAG+ F + G+P G + +P VP+N A +YGPN G ++QN
Sbjct: 122 YPPNLSSPFPYAGLGFPSYPGVPVGYM---IPQVPYNNAVNYGPNGYGGRYQNKPSTPMR 178
Query: 252 ---KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+D +SLTIG+ADEHIG VVGR GRNI EI Q SGARIK+SDRGDF +GTSERKVT
Sbjct: 179 SPANNDAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVT 238
Query: 309 ISGPQRSIRTAESMIMQKVAYASDR 333
I+G +I+ AESMIMQ+V +S+R
Sbjct: 239 ITGTSEAIQAAESMIMQRVTASSER 263
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S+ E +R +V N G +IGKGGSTI F S A I++S F G DR++ +
Sbjct: 39 SNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTV 98
Query: 88 SGTIDEILRAVDLVIDKLLTELH 110
+G +D +RA+ L++ KL ++H
Sbjct: 99 TGPLDHQMRAIYLILSKLSEDVH 121
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
GAV+G+ G I + SGARI++S +F GT++R + I+GT + I A +++ ++
Sbjct: 199 GAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRV 257
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/354 (46%), Positives = 232/354 (65%), Gaps = 32/354 (9%)
Query: 2 ETNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQ 61
E+ S Y SP KR + S D ++ + +R LVSN AG+VIGKGG+T++DFQ
Sbjct: 14 ESPASGYSTSPSRSPKRDGL-IYEPSEDGSKTSSCLRLLVSNAAAGSVIGKGGATVSDFQ 72
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK 121
+QSGARIQLSR+HEFFPGTTDRII+++G+I+EIL A +L++ KLL+E AED +DV K
Sbjct: 73 TQSGARIQLSRNHEFFPGTTDRIILVTGSINEILTAANLILQKLLSE--AEDN-NDVDEK 129
Query: 122 T-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
T ++RL++PNS CG IIGK GATIKSF++ SQA IK+S D G++DRLVT+TGTL++
Sbjct: 130 TSQVRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQILPGVSDRLVTITGTLEQ 189
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
Q+RA+ LI+ KL+ED Y+Q P +Y G +G G+P G P +P +YG
Sbjct: 190 QLRAIFLIVSKLAEDPNYAQYANAPLSYTGGSVAGIQGIPGGYTPVGY-GLP-----NYG 243
Query: 241 PNMGGRKFQNNK---------------------DDRTNSLTIGVADEHIGFVVGRGGRNI 279
++ G +NNK S+ + V D+ +G +VGR GR I
Sbjct: 244 SSVYGVNARNNKGLMAPLVAMRSPLPIGVPLVASGALTSVKMAVPDDRVGVIVGRAGRTI 303
Query: 280 MEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
++I Q+SGA+IK+SDRGDF SGT++R+VTISGP +++ A M+ Q+++ +R
Sbjct: 304 LDIQQVSGAKIKISDRGDFISGTNDRQVTISGPIDAVQHARHMLEQRLSSDLER 357
>gi|223973385|gb|ACN30880.1| unknown [Zea mays]
Length = 254
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/260 (55%), Positives = 191/260 (73%), Gaps = 17/260 (6%)
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
M+SG E+++A++L+++KLL E ++A+ + K+RL+VPNSSCG IIGK GATIK
Sbjct: 1 MVSGLFGEVMKAMELILEKLLAEGEEFNEAE---ARPKVRLVVPNSSCGGIIGKGGATIK 57
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
SF+++S A IKIS D++Y GL+DRLVT+TGT D QM A++LIL KLSED Y ++ P
Sbjct: 58 SFIEESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSP 117
Query: 206 YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG-GRKFQNNK----------DD 254
+ YAG+ F + G+P G + +P VP+N A +YGPN G G ++QNNK ++
Sbjct: 118 FPYAGLTFPSYPGVPVGYM---IPQVPYNNAVNYGPNNGYGGRYQNNKPSTPMRSPASNE 174
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
SLTIG+ADEHIG VVGR GRNI EI Q SGARIK+SDRGDF SGTS+RKVTI+G
Sbjct: 175 AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSE 234
Query: 315 SIRTAESMIMQKVAYASDRL 334
+IRTAESMIMQ+V+ +S+RL
Sbjct: 235 AIRTAESMIMQRVSASSERL 254
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V N G +IGKGG+TI F +S A I++S + G DR++ ++GT D +
Sbjct: 36 VRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMN 95
Query: 97 AVDLVIDKLLTELH 110
A+DL++ KL ++H
Sbjct: 96 AIDLILKKLSEDVH 109
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 3 TNESSYVPSPDVHGK----RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
N +Y P+ G+ + + P++S +S+ ++ I +++ GAV+G+ G I
Sbjct: 143 NNAVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIG--IADEHIGAVVGRAGRNIT 200
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SGARI++S +F GT+DR + I+GT + I A +++ ++
Sbjct: 201 EIIQASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 247
>gi|302800040|ref|XP_002981778.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
gi|300150610|gb|EFJ17260.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
Length = 310
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 200/312 (64%), Gaps = 28/312 (8%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
+KS S D + RFLVSN AG+VIGKGG+TI+D QSQSGARIQLSRS +FFPGTTD
Sbjct: 24 MKSSSEDGNGSQSSARFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTD 83
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
R++++SG I+++L A++L++ K+ E + Q D +LRL+VPNS CG+IIGK G
Sbjct: 84 RVVVLSGAINDVLTALNLILSKIQKETEDDSQTDS--KPNQLRLVVPNSVCGAIIGKGGG 141
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
TIKSF++DS+A IK+S + G++DRLVT+TG++++Q++A+ELIL KL D+ Y
Sbjct: 142 TIKSFIEDSEASIKLSGI---LQGISDRLVTITGSIEQQLKAVELILTKLLGDSSYLDYA 198
Query: 203 TVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIG 262
P +Y + F F PY + P + + P T S+T+
Sbjct: 199 AAPLSYTVICFKLFRLAPYPVLLPVLESCPV----------------------TTSITLA 236
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT-SERKVTISGPQRSIRTAES 321
V DEHIG +VGRGG+ + EI Q SG IK+S+RGDF SGT + RKVT+ G ++ A+
Sbjct: 237 VPDEHIGAIVGRGGKTLGEIQQASGVTIKISERGDFVSGTKNSRKVTLVGTAEGLQIAQF 296
Query: 322 MIMQKVAYASDR 333
+ KV ASDR
Sbjct: 297 YLTAKVQAASDR 308
>gi|302768295|ref|XP_002967567.1| hypothetical protein SELMODRAFT_88821 [Selaginella moellendorffii]
gi|300164305|gb|EFJ30914.1| hypothetical protein SELMODRAFT_88821 [Selaginella moellendorffii]
Length = 272
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/297 (47%), Positives = 194/297 (65%), Gaps = 28/297 (9%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
RFLVSN AG+VIGKGG+TI+D QSQSGARIQLSRS +FFPGTTDR++++SG I+++L A
Sbjct: 1 RFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSGAINDVLTA 60
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
++L++ K+ E + Q D +LRL+VPNS CG+IIGK G TIKSF++DS+A IK+
Sbjct: 61 LNLILSKIQKETEDDSQTDS--KPNQLRLVVPNSVCGAIIGKGGGTIKSFIEDSEASIKL 118
Query: 158 SRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
S + G++DRLVT+TG++++Q++A+ELIL KL D+ Y P +Y + F F
Sbjct: 119 SGI---LQGISDRLVTITGSIEQQLKAVELILTKLLGDSSYLDYAAAPLSYTVICFKLFR 175
Query: 218 GMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGR 277
PY + P + + P T S+T+ V DEHIG +VGRGG+
Sbjct: 176 LAPYPVLLPVLESCPV----------------------TTSITLAVPDEHIGAIVGRGGK 213
Query: 278 NIMEISQISGARIKVSDRGDFFSGT-SERKVTISGPQRSIRTAESMIMQKVAYASDR 333
+ EI Q SG IK+S+RGDF SGT + RKVT+ G ++ A+ + KV ASDR
Sbjct: 214 TLGEIQQASGVTIKISERGDFVSGTKNSRKVTLVGTAEGLQIAQFYLTAKVQAASDR 270
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 84/179 (46%), Gaps = 30/179 (16%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S KP +R +V N + GA+IGKGG TI F S A I+LS G +DR++ I
Sbjct: 76 SQTDSKPNQLRLVVPNSVCGAIIGKGGGTIKSFIEDSEASIKLS---GILQGISDRLVTI 132
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQA--------------------------DDVGTK 121
+G+I++ L+AV+L++ KLL + D A +
Sbjct: 133 TGSIEQQLKAVELILTKLLGDSSYLDYAAAPLSYTVICFKLFRLAPYPVLLPVLESCPVT 192
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS-RLDHSYYGLNDRLVTLTGTLD 179
T + L VP+ G+I+G+ G T+ S IKIS R D N R VTL GT +
Sbjct: 193 TSITLAVPDEHIGAIVGRGGKTLGEIQQASGVTIKISERGDFVSGTKNSRKVTLVGTAE 251
>gi|302766557|ref|XP_002966699.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
gi|300166119|gb|EFJ32726.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
Length = 324
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/319 (43%), Positives = 206/319 (64%), Gaps = 38/319 (11%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E T +RFLV+N AG+VIGKGGSTI+DFQ+QSGARIQLSR+HE+FPGT+DR+ ++SG++
Sbjct: 12 ETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSL 71
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++L A L+I K++ +D DD + +++L+VP + CG+IIGK G+ IK F++DS
Sbjct: 72 ADVLTAFQLIISKII----KDDNQDDTKS-IQVKLLVPKTVCGAIIGKGGSNIKKFVEDS 126
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG- 210
QA IK+S D G+ DR+VT+ G +D+ ++A+ LIL KL+E++ Y++T + P Y G
Sbjct: 127 QASIKLSSQDQLLPGVIDRIVTIGGNVDQIIKAVTLILTKLTEESSYTETTSTPLVYPGT 186
Query: 211 ---------VFFS--GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSL 259
V+ + G + PP+P A+ G T+S+
Sbjct: 187 RPTSFIVRCVYHASPGLQNLRRNGPGPPMP------VAYVGA-------------LTSSV 227
Query: 260 TIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTA 319
TIG+ DEHIGF++GR G+ + E+ Q SGA+IKVSDRGDF +GT RKVT+ G +I+ A
Sbjct: 228 TIGIPDEHIGFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAA 287
Query: 320 ESMIMQKV--AYASDRLMD 336
+ ++ QKV + ASD D
Sbjct: 288 QFLLTQKVQQSLASDYERD 306
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+NN + T +L V + G V+G+GG I + SGARI++S ++F GTS+R
Sbjct: 7 ENNAGETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAV 66
Query: 309 ISGPQRSIRTAESMIMQKV 327
+SG + TA +I+ K+
Sbjct: 67 LSGSLADVLTAFQLIISKI 85
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G ++G+ G T+ + Q SGA+I++S +F GT R + + G+ + I A L+ K+
Sbjct: 237 GFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAAQFLLTQKVQ 296
Query: 107 TELHAEDQADD 117
L ++ + D+
Sbjct: 297 QSLASDYERDN 307
>gi|302792551|ref|XP_002978041.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
gi|300154062|gb|EFJ20698.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
Length = 324
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/319 (43%), Positives = 206/319 (64%), Gaps = 38/319 (11%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E T +RFLV+N AG+VIGKGGSTI+DFQ+QSGARIQLSR+HE+FPGT+DR+ ++SG++
Sbjct: 12 ETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSL 71
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++L A L+I K++ +D DD + +++L+VP + CG+IIGK G+ IK F++DS
Sbjct: 72 ADVLTAFQLIISKII----KDDNQDDTKS-IQVKLLVPKTVCGAIIGKGGSNIKKFVEDS 126
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG- 210
QA IK+S D G+ DR+VT+ G +D+ ++A+ LIL KL+E++ Y++T + P Y G
Sbjct: 127 QASIKLSSQDQLLPGVIDRIVTIGGNVDQIIKAVTLILTKLTEESSYTETTSTPLVYPGT 186
Query: 211 ---------VFFS--GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSL 259
V+ + G + PP+P A+ G T+S+
Sbjct: 187 GPTPFIVRCVYHASPGLQNLRRNGPGPPMP------VAYVGA-------------LTSSV 227
Query: 260 TIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTA 319
TIG+ DEHIGF++GR G+ + E+ Q SGA+IKVSDRGDF +GT RKVT+ G +I+ A
Sbjct: 228 TIGIPDEHIGFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAA 287
Query: 320 ESMIMQKV--AYASDRLMD 336
+ ++ QKV + ASD D
Sbjct: 288 QFLLTQKVQQSLASDYERD 306
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+NN + T +L V + G V+G+GG I + SGARI++S ++F GTS+R
Sbjct: 7 ENNAGETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAV 66
Query: 309 ISGPQRSIRTAESMIMQKV 327
+SG + TA +I+ K+
Sbjct: 67 LSGSLADVLTAFQLIISKI 85
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G ++G+ G T+ + Q SGA+I++S +F GT R + + G+ + I A L+ K+
Sbjct: 237 GFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAAQFLLTQKVQ 296
Query: 107 TELHAEDQADD 117
L ++ + D+
Sbjct: 297 QSLASDYERDN 307
>gi|459269|emb|CAA54960.1| transcribed sequence 1087 [Zea mays]
Length = 228
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/229 (56%), Positives = 168/229 (73%), Gaps = 14/229 (6%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
++ + K+R +VPNSSCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+T
Sbjct: 3 NEAEARPKVRPVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTIT 62
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
GT D QM A++LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP++
Sbjct: 63 GTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGLTFPSYPGVPVGYM---IPQVPYSN 119
Query: 236 AAHYGPNMG-GRKFQNNK----------DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
A +YGPN G G ++QNNK ++ SLTIG+ADEHIG VVGR GRNI EI Q
Sbjct: 120 AVNYGPNNGYGGRYQNNKPTTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQ 179
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
SGARIK+SDRGD+ SGTS+RKVTI+G +IRTAESMIMQ+V+ +S+R
Sbjct: 180 ASGARIKISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRVSASSER 228
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V N G +IGKGG+TI F +S A I++S + G DR++ I+GT D +
Sbjct: 11 VRPVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTITGTFDNQMN 70
Query: 97 AVDLVIDKLLTELH 110
A+DL++ KL ++H
Sbjct: 71 AIDLILKKLSEDVH 84
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 3 TNESSYVPSPDVHGK----RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
+N +Y P+ G+ + T P++S +S+ E + +++ GAV+G+ G I
Sbjct: 118 SNAVNYGPNNGYGGRYQNNKPTTPMRSPASN--EAQESLTIGIADEHIGAVVGRAGRNIT 175
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SGARI++S ++ GT+DR + I+GT + I A +++ ++
Sbjct: 176 EIIQASGARIKISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRV 222
>gi|226504964|ref|NP_001141009.1| uncharacterized protein LOC100273088 [Zea mays]
gi|194702154|gb|ACF85161.1| unknown [Zea mays]
Length = 221
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 157/216 (72%), Gaps = 6/216 (2%)
Query: 1 METNESSYVPSPDVHGKRS-----TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGS 55
ME S Y SP+ KR+ S D EKP ++RFLVSN AG +IGKGGS
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKGGS 60
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQ 114
TINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG E+++A++L+++KLL E L+ ++
Sbjct: 61 TINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKAMELILEKLLAELLYQGEE 120
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
++ + K+RL+VPNSSCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+
Sbjct: 121 FNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTV 180
Query: 175 TGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
TGT D QM A++LIL KLSED Y ++ P+ YAG
Sbjct: 181 TGTFDNQMNAIDLILKKLSEDVHYPANLSSPFPYAG 216
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 47/216 (21%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ DD LR +V N+S G IIGK G+TI F S A I++SR + G NDR++
Sbjct: 31 EEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRII 90
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
++G E M+A+ELIL KL + LY
Sbjct: 91 MVSGLFGEVMKAMELILEKLLAELLYQ--------------------------------- 117
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
G +F N+ + + + V + G ++G+GG I + S A IK+
Sbjct: 118 ------------GEEF--NEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKI 163
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
S + + + G +R VT++G + A +I++K++
Sbjct: 164 SPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLS 199
>gi|358348269|ref|XP_003638170.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|358348273|ref|XP_003638172.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|355504105|gb|AES85308.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|355504107|gb|AES85310.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
Length = 177
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 145/180 (80%), Gaps = 6/180 (3%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDP---TEKPTYIRFLVSNPLAGAVIGKGGSTI 57
ME+ ESSYV SP+ G R A S EKPTY+RFLVSN AG+VIGKGGSTI
Sbjct: 1 MESPESSYVSSPE--GPRKHASSPPPDSPSQDSVEKPTYVRFLVSNSAAGSVIGKGGSTI 58
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
DFQSQSGARIQLSR++EFFPGTTDRIIM+SG I+E+LRAV+L++ KLL+ELH+ED +D
Sbjct: 59 TDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLRAVELILSKLLSELHSEDD-ND 117
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
V KTK+RLIVPN SCG IIGK GATI+SF+++SQA IKIS D+SYYG NDR+VT+TGT
Sbjct: 118 VEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSYYGQNDRIVTVTGT 177
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 49/190 (25%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T +R +V NS+ GS+IGK G+TI F S A I++SR + + G DR++ ++G ++E
Sbjct: 36 TYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEV 95
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
+RA+ELIL KL + L+S+
Sbjct: 96 LRAVELILSKLLSE-LHSED---------------------------------------- 114
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
N+ + +T I V + G ++G+GG I + S A IK+S + + + G
Sbjct: 115 -------DNDVEPKTKVRLI-VPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSYYG 166
Query: 302 TSERKVTISG 311
++R VT++G
Sbjct: 167 QNDRIVTVTG 176
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
V++ G V+G+GG I + SGARI++S +FF GT++R + +SG + A +
Sbjct: 42 VSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLRAVEL 101
Query: 323 IMQKV 327
I+ K+
Sbjct: 102 ILSKL 106
>gi|357123010|ref|XP_003563206.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 311
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 196/309 (63%), Gaps = 38/309 (12%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
K ++ FLVS+ AG +IGK GS + +SQSGARI +SR + FPGTT R++++SG +
Sbjct: 25 KKKHVMFLVSHMEAGCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTSRVVLVSGLFN 84
Query: 93 EILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
+++ A++L++++L+ + DQ D +K + L+VP+ CG++IGK GAT+K+ +
Sbjct: 85 QLMDAMELILERLV---YQGDQVID--SKATIALVVPSVCCGALIGKGGATLKAITQKAS 139
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
A IKIS D+SY GL+DRLVT+TG+LD Q+RA+ LIL KL ED LYS +P A +
Sbjct: 140 AGIKISPQDNSY-GLHDRLVTITGSLDNQLRAIFLILSKLLEDVLYS----IPI--ARIV 192
Query: 213 FSGFHGMPYGAVPPPVPAVPHNTAA--HYGPNMGGRKFQN---------NKDDRTNSLTI 261
FS + P P N + H G ++QN +K+D LTI
Sbjct: 193 FSRY---------PASPVEYENVGSDEHVG------RYQNKPNTPVRSPDKNDGQEYLTI 237
Query: 262 GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAES 321
+ADEHIG V+GR GR+I EI+Q+SGA I++S +GDF + T +R+V ISG +I+ AE+
Sbjct: 238 AIADEHIGAVIGRAGRSINEITQVSGACIRISAKGDFIADTCDREVVISGTPEAIQAAEA 297
Query: 322 MIMQKVAYA 330
MIM +V+ A
Sbjct: 298 MIMHRVSAA 306
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
Q D G K + +V + G IIGKAG+ +KS S A I ISR D + G R+V
Sbjct: 19 QGSDGGKKKHVMFLVSHMEAGCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTSRVVL 78
Query: 174 LTGTLDEQMRALELILLKLSE------DTLYSQTMTVPYTYAGVFF 213
++G ++ M A+ELIL +L D+ + + VP G
Sbjct: 79 VSGLFNQLMDAMELILERLVYQGDQVIDSKATIALVVPSVCCGALI 124
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
PV+S D + Y+ +++ GAVIG+ G +IN+ SGA I++S +F T
Sbjct: 222 PVRS--PDKNDGQEYLTIAIADEHIGAVIGRAGRSINEITQVSGACIRISAKGDFIADTC 279
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
DR ++ISGT + I A +++ ++
Sbjct: 280 DREVVISGTPEAIQAAEAMIMHRV 303
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+ G + + SGARI +S F GT+ R V +SG + A +I++++
Sbjct: 39 GCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTSRVVLVSGLFNQLMDAMELILERLV 98
Query: 329 YASDRLMD 336
Y D+++D
Sbjct: 99 YQGDQVID 106
>gi|255071283|ref|XP_002507723.1| predicted protein [Micromonas sp. RCC299]
gi|226522998|gb|ACO68981.1| predicted protein [Micromonas sp. RCC299]
Length = 287
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 185/295 (62%), Gaps = 19/295 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++FL+ + AG++IGKGG+T+N+ QSQ+G+RIQLSR+ E FPGT DRI+ + GT IL
Sbjct: 5 LKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTAPSILG 64
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A L+I KL+ D VG + ++L++PN+SCG IIG+ GATI++F DDSQA IK
Sbjct: 65 AFHLMISKLV-----RDGEGLVGGRPHVKLVIPNASCGCIIGRGGATIRNFADDSQAEIK 119
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
+S +H G+N+R++T+TG D +RA+ L+ LS+D Y + ++ P TY
Sbjct: 120 LSSQEHMLPGVNERVLTITGANDRVLRAIALVATALSQDGCYEELISRPSTYT------I 173
Query: 217 HGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGG 276
GMP P + ++ AA N+ + ++D S+ I V DEHIG V+G+GG
Sbjct: 174 DGMPM-----PYSGINNDFAAAVNHNV---EHGRSQDGDVISVAIDVPDEHIGAVLGKGG 225
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYAS 331
R I EI SG RIKVS+RGD+ GT R+VT++G ++ A ++ QK+ ++
Sbjct: 226 RTISEIQITSGIRIKVSERGDYVEGTKNRRVTLTGAGDKVQMARFLLEQKLCASA 280
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 82/195 (42%), Gaps = 40/195 (20%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ ++ N G +IG+GG+TI +F S A I+LS PG +R++ I+G D +L
Sbjct: 86 HVKLVIPNASCGCIIGRGGATIRNFADDSQAEIKLSSQEHMLPGVNERVLTITGANDRVL 145
Query: 96 RAVDLVI-----DKLLTEL--------------------------------HAEDQADDV 118
RA+ LV D EL H Q DV
Sbjct: 146 RAIALVATALSQDGCYEELISRPSTYTIDGMPMPYSGINNDFAAAVNHNVEHGRSQDGDV 205
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
+ + VP+ G+++GK G TI S IK+S G +R VTLTG
Sbjct: 206 ---ISVAIDVPDEHIGAVLGKGGRTISEIQITSGIRIKVSERGDYVEGTKNRRVTLTGAG 262
Query: 179 DEQMRALELILLKLS 193
D+ A L+ KL
Sbjct: 263 DKVQMARFLLEQKLC 277
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GAV+GKGG TI++ Q SG RI++S ++ GT +R + ++G D++ A L+ KL
Sbjct: 218 GAVLGKGGRTISEIQITSGIRIKVSERGDYVEGTKNRRVTLTGAGDKVQMARFLLEQKLC 277
Query: 107 TELHAED 113
E+
Sbjct: 278 ASASVEE 284
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
D G ++G+GG + E+ +G+RI++S + F GT +R VT+ G SI A +++
Sbjct: 11 DSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTAPSILGAFHLMI 70
Query: 325 QKVAYASDRLM 335
K+ + L+
Sbjct: 71 SKLVRDGEGLV 81
>gi|145341361|ref|XP_001415781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576004|gb|ABO94073.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 340
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 184/303 (60%), Gaps = 14/303 (4%)
Query: 27 SSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
S+ P + ++ ++FL+S AG+VIGKGG+TIN+FQ+ +GARIQLSR+ E FPGT DR++
Sbjct: 36 SAAPIDDGSFTLKFLISPSAAGSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVV 95
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
++SG + IL+ + L+I KL+ A+ + D + ++ L+VPNSSCG IIGK G+ I+
Sbjct: 96 IVSGDLSAILQVLHLIITKLV----ADGEGIDRMGQPQVALVVPNSSCGCIIGKGGSKIR 151
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
SF++DSQA IK+S D G NDR +T+TGT+D +RA+ L+ L ED Y+ +
Sbjct: 152 SFVEDSQADIKLSNQDRMLPGCNDRTLTITGTIDCVLRAVALVATTLCEDPAYATLVHRQ 211
Query: 206 YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVAD 265
TY+ + G T YG GG +DD T S+ + + D
Sbjct: 212 STYS---VQSPLSLQGGGGGRRSGEFNRATPRRYGAGQGG-----GRDDET-SILVTIPD 262
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
IG V+GRGGR I E+ SG RIKVSDR DFF GT RKV ISG ++ A ++ Q
Sbjct: 263 SLIGAVLGRGGRTIAEVQVASGCRIKVSDRDDFFEGTRNRKVVISGSAEGVQMANYLLTQ 322
Query: 326 KVA 328
K++
Sbjct: 323 KLS 325
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 39/199 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ +V N G +IGKGGS I F S A I+LS PG DR + I+GTID +LR
Sbjct: 130 VALVVPNSSCGCIIGKGGSKIRSFVEDSQADIKLSNQDRMLPGCNDRTLTITGTIDCVLR 189
Query: 97 AVDLVIDKLL------TELHAED---------------------------------QADD 117
AV LV L T +H + Q
Sbjct: 190 AVALVATTLCEDPAYATLVHRQSTYSVQSPLSLQGGGGGRRSGEFNRATPRRYGAGQGGG 249
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+T + + +P+S G+++G+ G TI S IK+S D + G +R V ++G+
Sbjct: 250 RDDETSILVTIPDSLIGAVLGRGGRTIAEVQVASGCRIKVSDRDDFFEGTRNRKVVISGS 309
Query: 178 LDEQMRALELILLKLSEDT 196
+ A L+ KLS T
Sbjct: 310 AEGVQMANYLLTQKLSAIT 328
>gi|384248088|gb|EIE21573.1| hypothetical protein COCSUDRAFT_17393 [Coccomyxa subellipsoidea
C-169]
Length = 311
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 180/302 (59%), Gaps = 33/302 (10%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ +FL+SN AG++IGKGG+ I++ QSQSGAR+QLSR+ EFFPGT +R+++ SG++
Sbjct: 39 EQKVIAKFLMSNAAAGSIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVMLASGSV 98
Query: 92 DEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+++L A+ L++ K+ E + A D G T+LRL+VP CG+IIGK GATI+SF +
Sbjct: 99 NQVLTALHLILTKIQGEQSMMARD-----GKSTQLRLLVPTPLCGAIIGKGGATIRSFAE 153
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
DS+A I +S D G+ DR+V +TG D+ +RA+ L+L KL E Y++ T +Y
Sbjct: 154 DSRAAITVSPQDKQPLGIPDRVVRITGAQDQLLRAVALLLTKLVESPNYTRFTTSNVSYG 213
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIG 269
PPP H G G + + + +T+ V + +G
Sbjct: 214 ---------------PPP---------QHMGYQQKG--YMQPQQQQRMEVTVPVPEARVG 247
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAY 329
++G+GG I ++ + G +I++SDR DF GT RKVTISG +++ A+ +I QK+
Sbjct: 248 AIIGKGGEVISQLKSVIGVKIRISDRDDFVPGTRNRKVTISGAADAVQIAQVLIHQKINQ 307
Query: 330 AS 331
A+
Sbjct: 308 AA 309
>gi|222424254|dbj|BAH20084.1| AT5G04430 [Arabidopsis thaliana]
Length = 151
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/152 (58%), Positives = 120/152 (78%), Gaps = 1/152 (0%)
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG 244
++LIL KL+ED YSQ + PY+YAG+F+SGFHG PY P V +N+ +Y PN
Sbjct: 1 IDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSV-NYAPNGS 59
Query: 245 GRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE 304
G K+QN+K++ + ++TIGVADEHIG V+GRGGRNIMEI+Q++GARIK+SDRGDF SGT++
Sbjct: 60 GGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTD 119
Query: 305 RKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
RKV+I+GPQR+I+ AE+MI QKV A++R D
Sbjct: 120 RKVSITGPQRAIQQAETMIKQKVDSATERTTD 151
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E T + V++ G V+G+GG I + +GARI++S +F GTTDR + I+G
Sbjct: 69 EASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQ 128
Query: 92 DEILRAVDLVIDKL 105
I +A ++ K+
Sbjct: 129 RAIQQAETMIKQKV 142
>gi|308798859|ref|XP_003074209.1| putative RNA-binding protein (ISS) [Ostreococcus tauri]
gi|116000381|emb|CAL50061.1| putative RNA-binding protein (ISS) [Ostreococcus tauri]
Length = 308
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 159/292 (54%), Gaps = 44/292 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++FL+S AG+VIGKGG+TIN+FQ+ +GAR+QLSRS E FPGT DR++++SG ++ IL+
Sbjct: 42 LKFLISPSAAGSVIGKGGATINEFQALTGARVQLSRSREVFPGTNDRVVIVSGDLNAILQ 101
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+ L+ LT+L A+ + D +L L+VPN CG +IGK G+ I++F++DSQA IK
Sbjct: 102 VLYLI----LTKLVADGEGIDRSGTPQLALVVPNGCCGCVIGKGGSKIRNFVEDSQADIK 157
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
+S D G NDR +T+TG YS + G SG
Sbjct: 158 LSNQDRMLPGCNDRTLTITGRW----------------IATYSVQAPLGARIGGGRRSGD 201
Query: 217 HGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGG 276
HG + DD T S+ + + D IG V+GRGG
Sbjct: 202 HGRSVSG-----------------------SSRRGGDDET-SILVTIPDSLIGAVLGRGG 237
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
R I E+ SG RIKVS R DFF GT RKV I+G Q ++ A ++ QK++
Sbjct: 238 RTIAEVQVASGCRIKVSARDDFFEGTRNRKVVITGSQEGVQMANYLLTQKLS 289
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 16 GKRSTAPVKSLSSDPT---EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
G+RS +S+S + T I + + L GAV+G+GG TI + Q SG RI++S
Sbjct: 196 GRRSGDHGRSVSGSSRRGGDDETSILVTIPDSLIGAVLGRGGRTIAEVQVASGCRIKVSA 255
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+FF GT +R ++I+G+ + + A L+ KL
Sbjct: 256 RDDFFEGTRNRKVVITGSQEGVQMANYLLTQKL 288
>gi|412993678|emb|CCO14189.1| predicted protein [Bathycoccus prasinos]
Length = 335
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 180/329 (54%), Gaps = 36/329 (10%)
Query: 22 PVKSLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P + S+P P + ++ LV + AGAV+GKGG+TIN+ Q+ + RIQL+R+ E FPGT
Sbjct: 12 PTTTTGSNPHSDPAFALKMLVDSRNAGAVLGKGGATINELQTSTNCRIQLTRTGEVFPGT 71
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA---------------------DDVG 119
++R++ +SG + +L AV L+ KL +E + + ++
Sbjct: 72 SERVLTLSGELPSVLTAVHLISTKLQSETNNGNNNNNNENNEENFENTNTNTEGGEENKQ 131
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
K RL++PN++ G ++GK GATIKSF++DS+A I++S + + G +DR++T++GT+
Sbjct: 132 QTPKCRLVIPNAAAGCVLGKGGATIKSFIEDSEAEIRLSSQNQAPPGCHDRILTISGTIG 191
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHG-MPYGAVPPPVPAVPHNTAAH 238
+ +RA+ L+ L ED Y+ + P TY G G M +G H
Sbjct: 192 QILRAVALVAANLLEDQNYATLVKRPSTYRPSLDYGRGGSMDHG-------------RGH 238
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
Y N ++ N S T+ V D +G ++G+GGR I EI SG RIKVSDR DF
Sbjct: 239 YNNNHHHQQQHNVDPQNVVSATMQVDDSKMGPILGKGGRTITEIQVSSGCRIKVSDRNDF 298
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ R + ISG ++ A M+ +++
Sbjct: 299 VPGTNLRTLQISGSVTGVQLAWEMLEERL 327
>gi|413939546|gb|AFW74097.1| hypothetical protein ZEAMMB73_647534 [Zea mays]
gi|413939547|gb|AFW74098.1| hypothetical protein ZEAMMB73_647534 [Zea mays]
Length = 161
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 116/164 (70%), Gaps = 14/164 (8%)
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
M A++LIL KLS D Y ++ P+ YAG+ F + G+P G + +P VP+N A +YGP
Sbjct: 1 MNAIDLILKKLSLDVHYPANLSSPFPYAGLTFPSYPGVPVGYM---IPQVPYNNAVNYGP 57
Query: 242 NMG-GRKFQNNK----------DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARI 290
N G G ++QNNK ++ SLTIG+ADEHIG VVGR GRNI EI Q SGARI
Sbjct: 58 NNGYGGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARI 117
Query: 291 KVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
K+SDRGDF SGTS+RKVTI+G +IRTAESMIMQ+V+ +S+RL
Sbjct: 118 KISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSERL 161
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 15 HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
+ + P++S +S+ ++ I +++ GAV+G+ G I + SGARI++S
Sbjct: 66 QNNKPSTPMRSPASNEAQESLTIG--IADEHIGAVVGRAGRNITEIIQASGARIKISDRG 123
Query: 75 EFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+F GT+DR + I+GT + I A +++ ++
Sbjct: 124 DFISGTSDRKVTITGTSEAIRTAESMIMQRV 154
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ L + + + G+++G+AG I + S A IKIS G +DR VT+TGT +
Sbjct: 83 QESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSEA 142
Query: 181 QMRALELILLKLSEDT 196
A +I+ ++S +
Sbjct: 143 IRTAESMIMQRVSASS 158
>gi|428183593|gb|EKX52450.1| hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]
Length = 358
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 182/348 (52%), Gaps = 36/348 (10%)
Query: 13 DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
DV KR S D T+ ++ L+ N AG+VIGK G+TIN + SGA++++S
Sbjct: 16 DVLAKRQVTGDGISSGDETQ--MALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSS 73
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSS 132
+ E FPGT DRI++ISG ++ +L A +VI ++ + ++ DDV + +++P ++
Sbjct: 74 NSETFPGTADRIVLISGKVETVLSAAKMVISEMYRDPNSGRVPDDVNAVMTVSIVIPAAA 133
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLK 191
CG +IGK G I S +++QA I++ D + GLN+R+VT+ GTL + A+E I+
Sbjct: 134 CGLVIGKGGEKINSLREETQAKIQLQAKDKVAIPGLNERIVTIQGTLPQAQTAVEKIVHL 193
Query: 192 LSED-TLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG---------- 240
+ ED + + + Y +G+ G G YG P+ AA YG
Sbjct: 194 IHEDGNIRYENLGTNYGMSGMMGKGL-GQGYGMGMMPM----QGAAAMYGGMQMPMGMDM 248
Query: 241 --PNMG----------GRKFQNNKD-----DRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
MG G+++ D L + + D+ +G ++G+GG N+ E
Sbjct: 249 ASQGMGMAPGMPGVVPGQEYWGMSQHGLGTDMHTVLKLSITDDAVGPLLGKGGCNLKEYI 308
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYAS 331
+SGA IKVS RGD GT+ R +TI G +++ A+ +++QK A+
Sbjct: 309 SVSGANIKVSQRGDTIPGTNNRYITIQGTAAAVQYAQLLVLQKAPNAT 356
>gi|358348277|ref|XP_003638174.1| RNA-binding protein Nova-2 [Medicago truncatula]
gi|355504109|gb|AES85312.1| RNA-binding protein Nova-2 [Medicago truncatula]
Length = 126
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 101/123 (82%), Gaps = 1/123 (0%)
Query: 212 FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFV 271
+ SG+ G+PY V P V A P +Y PN G KFQN+K+DR+NS+TIGVADEHIG V
Sbjct: 4 YVSGYQGVPYTYVLPSV-APPAYNGVNYRPNGTGAKFQNSKEDRSNSMTIGVADEHIGLV 62
Query: 272 VGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYAS 331
VGRGGRNI +ISQ SGA+IK+SDRGD+ SGT++RKVTI+G QR+IRTAESMI+QKVAYA+
Sbjct: 63 VGRGGRNISDISQTSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAYAT 122
Query: 332 DRL 334
+R+
Sbjct: 123 ERV 125
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V++ G V+G+GG I+D SGA+I++S ++ GTTDR + I+G+ I A +
Sbjct: 54 VADEHIGLVVGRGGRNISDISQTSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESM 113
Query: 101 VIDKL 105
++ K+
Sbjct: 114 ILQKV 118
>gi|297600140|ref|NP_001048558.2| Os02g0822300 [Oryza sativa Japonica Group]
gi|255671363|dbj|BAF10472.2| Os02g0822300, partial [Oryza sativa Japonica Group]
Length = 156
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 111/159 (69%), Gaps = 13/159 (8%)
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG 244
+ LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP+N A +YGPN
Sbjct: 1 IYLILSKLSEDVHYPPNLSSPFPYAGLGFPSYPGVPVGYM---IPQVPYNNAVNYGPNGY 57
Query: 245 GRKFQNNK----------DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD 294
G ++QNNK +D +SLTIG+ADEHIG VVGR GRNI EI Q SGARIK+SD
Sbjct: 58 GGRYQNNKPSTPMRSPANNDAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISD 117
Query: 295 RGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
RGDF +GTSERKVTI+G +I+ AESMIMQ+V +S+R
Sbjct: 118 RGDFIAGTSERKVTITGTSEAIQAAESMIMQRVTASSER 156
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
GAV+G+ G I + SGARI++S +F GT++R + I+GT + I A +++ ++
Sbjct: 92 GAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRV 150
>gi|302842622|ref|XP_002952854.1| hypothetical protein VOLCADRAFT_121094 [Volvox carteri f.
nagariensis]
gi|300261894|gb|EFJ46104.1| hypothetical protein VOLCADRAFT_121094 [Volvox carteri f.
nagariensis]
Length = 336
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 168/302 (55%), Gaps = 34/302 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ LVSN +AG+VIGK G+ I Q SGAR+QLSR+ EF+PGT+DR++++SG++ +L A
Sbjct: 45 KLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTA 104
Query: 98 VDLVIDKLLTELHAEDQADDV--GTK-------TKLRLIVPNSSCGSIIGKAGATIKSFM 148
+ L+++K+ + +A ++ V G K +++L + CG +IG G T++ F+
Sbjct: 105 IFLILEKISRDANASASSNGVKRGAKKPEEAGQAQVKLALSRRLCGLLIGHKGQTVRDFI 164
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
DS + I++ L +R +T++G D+ +RA+ LIL LS Y+ M
Sbjct: 165 GDSGSTIRVQSLSELTPSDPERTITVSGARDQVLRAVALILNTLSMHEGYASYMETTLQL 224
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHI 268
A G V PP A N ++ RT LT+ ++D+ +
Sbjct: 225 A---------TNQGVVLPPRAASSKNVLSNV---------------RTQ-LTLYLSDDDV 259
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+ G+N++E+ Q S IK+SDR T+ER+VTISG +++ AE+MI +K++
Sbjct: 260 GAILGKKGQNLIEVQQSSRVTIKISDRSKMDPTTNEREVTISGNYSAVKLAEAMIAEKLS 319
Query: 329 YA 330
A
Sbjct: 320 VA 321
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEK-PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
S D + S+ VK + P E ++ +S L G +IG G T+ DF SG+ I+
Sbjct: 113 SRDANASASSNGVKRGAKKPEEAGQAQVKLALSRRLCGLLIGHKGQTVRDFIGDSGSTIR 172
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL-LTELHAE------DQADDVG--- 119
+ E P +R I +SG D++LRAV L+++ L + E +A A + G
Sbjct: 173 VQSLSELTPSDPERTITVSGARDQVLRAVALILNTLSMHEGYASYMETTLQLATNQGVVL 232
Query: 120 -------------TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
+T+L L + + G+I+GK G + S+ IKIS
Sbjct: 233 PPRAASSKNVLSNVRTQLTLYLSDDDVGAILGKKGQNLIEVQQSSRVTIKISDRSKMDPT 292
Query: 167 LNDRLVTLTGTLDEQMRALELILLKLS 193
N+R VT++G A +I KLS
Sbjct: 293 TNEREVTISGNYSAVKLAEAMIAEKLS 319
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 170/308 (55%), Gaps = 39/308 (12%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTI 261
+ Y AG V S G PY A P + AA + + I
Sbjct: 212 ISYANVAGPVANSNPTGSPY--------ASPADLAAESAKEL---------------VEI 248
Query: 262 GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAES 321
V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 249 AVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQY 308
Query: 322 MIMQKVAY 329
+I Q+V Y
Sbjct: 309 LISQRVTY 316
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 17 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 77 GTTERVCLVQGTAEALNAVHSFIAEKV 103
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 173/308 (56%), Gaps = 22/308 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTI 261
+ Y AG V S G PY + P +P A G + K + + I
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS---PADVLPAAAGAAGG-FLTAEKL--AAESAKELVEI 265
Query: 262 GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAES 321
V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 266 AVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQY 325
Query: 322 MIMQKVAY 329
+I Q+V Y
Sbjct: 326 LISQRVTY 333
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 17 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 77 GTTERVCLVQGTAEALNAVHSFIAEKV 103
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 175/319 (54%), Gaps = 35/319 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ N AG++IGKGG IND Q+ S RI+LS +++ FPGT +R+I+I+G+I + +
Sbjct: 24 LKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITGSIAGVRQ 83
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-----LRLIVPNSSCGSIIGKAGATIKSFMDDS 151
+++K+ E A D+A G K L++IVPN++ G IIGK G+ IK D S
Sbjct: 84 VNRFILEKVSEEGKA-DKAIQYGVLDKNRNRQLKMIVPNAAAGVIIGKGGSNIKEIQDKS 142
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY--- 208
A +++S+ + Y +++R++T+TG +E++ A ELI+ K ED +V Y++
Sbjct: 143 GAHVQVSQ-KKAQYAIDERILTVTGEFNERLTAWELIIWKCLEDINNLPNTSVSYSHVEP 201
Query: 209 AGVFFSGFHGMPYGA-----VPPPVPAVPHN--TAAHYGPNMGGRKFQNN---------- 251
AG H YG P A ++ T+ Y P + Q +
Sbjct: 202 AGT-LPALHSNYYGGGNANDRPMDSSAASYDPYTSERYSPTQVTQDAQADRQYGMQSYPP 260
Query: 252 --KDDRTNS-----LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE 304
+++R +S + I V D IG ++G+ G+ I +I ISGA I+VS RGD+ GT +
Sbjct: 261 TARNNRPSSYGETVIKIPVPDSIIGAILGKRGKVISDIQNISGAHIQVSQRGDYIPGTKD 320
Query: 305 RKVTISGPQRSIRTAESMI 323
R+VT++G + A+ +I
Sbjct: 321 REVTVTGTNDAAHYADKLI 339
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%)
Query: 15 HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
+G +S P + + T I+ V + + GA++GK G I+D Q+ SGA IQ+S+
Sbjct: 253 YGMQSYPPTARNNRPSSYGETVIKIPVPDSIIGAILGKRGKVISDIQNISGAHIQVSQRG 312
Query: 75 EFFPGTTDRIIMISGTIDEILRAVDLV 101
++ PGT DR + ++GT D A L+
Sbjct: 313 DYIPGTKDREVTVTGTNDAAHYADKLI 339
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I ++ S RI++S D F GT ER + I+G +R I++KV+
Sbjct: 34 GSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITGSIAGVRQVNRFILEKVS 93
>gi|159475617|ref|XP_001695915.1| hypothetical protein CHLREDRAFT_191517 [Chlamydomonas reinhardtii]
gi|158275475|gb|EDP01252.1| predicted protein [Chlamydomonas reinhardtii]
Length = 338
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 164/305 (53%), Gaps = 38/305 (12%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ LVSN +AG+VIGK G+ I Q SGAR+QLSR+ EF+PGT+DR++++SG++ +L A
Sbjct: 46 KLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTA 105
Query: 98 VDLVIDKLLTELHAEDQA------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ L+++K+ ++ A A +D G + +++L + CG +IG G T++
Sbjct: 106 IFLILEKISRDVSAGAGANGAKRGVPVKKPEDAG-QAQVKLALSRRLCGLLIGHKGQTVR 164
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
F+ DS + I++ L +R +T++G D+ +RA+ LIL LS Y+ M
Sbjct: 165 DFIVDSGSTIRVQSLSELTPSDPERTITVSGARDQVLRAVALILNTLSMHEGYASYMDTT 224
Query: 206 YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVAD 265
A G V PP + N + RT LT+ + D
Sbjct: 225 LQLA---------TNQGVVLPPRASSSKNVLSAV---------------RTQ-LTLYLPD 259
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G N++E+ Q S IK+SDR T ER+V+ISG +++ AE+MI +
Sbjct: 260 DDVGAILGKKGSNLVEVQQSSRVTIKISDRSKMDPTTQEREVSISGTYSAVKLAEAMIAE 319
Query: 326 KVAYA 330
K++ A
Sbjct: 320 KLSVA 324
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 177/327 (54%), Gaps = 28/327 (8%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D E +++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++
Sbjct: 35 DGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 94
Query: 89 GTIDEILRAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSI 136
GT E L AV I + + E+ A + + V + +LIVPNS+ G I
Sbjct: 95 GTA-EALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLI 153
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED
Sbjct: 154 IGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 212
Query: 197 LYSQTMTVPYT-YAG-VFFSGFHGMPYGA----VPPPVPAVPHNTAAHYGPN--MGGRKF 248
S + + Y AG V S G PY + +P A + GP G F
Sbjct: 213 QSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAGLAGVGAF 272
Query: 249 Q------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
+ D + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT
Sbjct: 273 PAALPAFSGTDLAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGT 332
Query: 303 SERKVTISGPQRSIRTAESMIMQKVAY 329
R+VTI+G + + A+ +I Q+V Y
Sbjct: 333 RNRRVTITGSPAATQAAQYLISQRVTY 359
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 164/308 (53%), Gaps = 44/308 (14%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 218 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 276
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 277 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 336
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 337 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 395
Query: 204 VPYT-YAG-VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTI 261
+ Y AG V S G PY + I
Sbjct: 396 ISYANVAGPVANSNPTGSPYAS----------------------------PXXXXXXXXI 427
Query: 262 GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAES 321
V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 428 AVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQY 487
Query: 322 MIMQKVAY 329
+I Q+V Y
Sbjct: 488 LISQRVTY 495
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P S + P V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT
Sbjct: 410 PTGSPYASPXXXXXXXXIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 469
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTE 108
+R + I+G+ A L+ ++ E
Sbjct: 470 NRRVTITGSPAATQAAQYLISQRVTYE 496
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 201 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 260
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 261 GTTERVCLVQGTAEALNAVHSFIAEKV 287
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 166/306 (54%), Gaps = 38/306 (12%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 6 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 64
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 65 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 124
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 125 VKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 183
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
+ +YA V + P G + A + + I V
Sbjct: 184 I--SYANVAGPVANSNPTGLTAEKLAA----------------------ESAKELVEIAV 219
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+ +I
Sbjct: 220 PENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLI 279
Query: 324 MQKVAY 329
Q+V Y
Sbjct: 280 SQRVTY 285
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 173/332 (52%), Gaps = 40/332 (12%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 7 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 65
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 66 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 125
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 126 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 184
Query: 204 VPYT-YAG-VFFSGFHGMPYGAVPPPVP-----------------------AVPHNTAAH 238
+ Y AG V S G PY + +P A P
Sbjct: 185 ISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPAXXXXX 244
Query: 239 YGPNMGGRKFQNNKDDRTNSLT-IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD 297
G G + + L I V + +G ++G+GG+ ++E +++GARI++S +G+
Sbjct: 245 AGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 304
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQKVAY 329
F GT R+VTI+G + + A+ +I Q+V Y
Sbjct: 305 FLPGTRNRRVTITGSPAATQAAQYLISQRVTY 336
>gi|156368623|ref|XP_001627792.1| predicted protein [Nematostella vectensis]
gi|156214712|gb|EDO35692.1| predicted protein [Nematostella vectensis]
Length = 390
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 181/367 (49%), Gaps = 51/367 (13%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SPD P K + P + P ++ LV N AG++IGKGG I Q +GARI+L
Sbjct: 28 SPDTR-----QPYKRSNFGPAKSP-ILKILVPNYAAGSIIGKGGQNIAQVQQTTGARIKL 81
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG----TKTKLRL 126
S +++++PGT +RI +I G ++ I++ +D VIDK+ E + + ++++
Sbjct: 82 SPNNQYYPGTQERIGLIMGEVENIVQMLDFVIDKIRQEPQGIKASMSISFDRERAKQMKI 141
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
IVPNS+ G IIGKAG+ IKS + + A I+IS+ D +R+V + G+ ++ A
Sbjct: 142 IVPNSTAGMIIGKAGSAIKSISEQTGARIQISQKDAESVA-GERIVCVGGSQEQVTAACV 200
Query: 187 LILLKLSEDTLYSQTMTVPYT-------------YAGVFFSGFHGMPYGAVP-------- 225
+I K+ ED ++ + Y+ AG FS G+P+ A+
Sbjct: 201 IITSKVQEDPEHALNNNIMYSGLTTSRAGHTNGQLAGSAFS--SGLPFSALSGLSALGLT 258
Query: 226 -----PPVPAVPHNTAAHYGPNMGGRKFQN-----------NKDDRTNSLTIGVADEHIG 269
N M G N + + +L I V DE IG
Sbjct: 259 NTATAQNTTTSATNHILAQAALMSGSNLNNPMAPPTSTATSSSIQSSATLEITVPDELIG 318
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAY 329
++G+GG+ I E Q SGARI+VS +G+F GTS RKV I+G + + A ++ Q++
Sbjct: 319 AILGKGGKTITEFMQYSGARIQVSQKGEFVPGTSNRKVVITGDVPAAQLAHFLVTQRIQQ 378
Query: 330 A-SDRLM 335
++RL+
Sbjct: 379 VEAERLL 385
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 168/306 (54%), Gaps = 30/306 (9%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
+ +YA V G V P A + + K + + I V
Sbjct: 212 I--SYANV---------AGPVANSNPTAAAGAAGGF---LTAEKL--AAESAKELVEIAV 255
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+ +I
Sbjct: 256 PENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLI 315
Query: 324 MQKVAY 329
Q+V Y
Sbjct: 316 SQRVTY 321
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 17 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 77 GTTERVCLVQGTAEALNAVHSFIAEKV 103
>gi|428180127|gb|EKX48995.1| hypothetical protein GUITHDRAFT_68316, partial [Guillardia theta
CCMP2712]
Length = 276
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 158/294 (53%), Gaps = 24/294 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ LVSN AG VIGK GSTI QS++G +I++S +++FFPGT DR+++I+GT + ++
Sbjct: 1 VQLLVSNKDAGTVIGKSGSTIQSVQSRTGCKIRISNNNDFFPGTQDRVLLITGTTEAVMM 60
Query: 97 AVDLVIDKLLTELH-AEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+I +LL H E+ D TK + ++VP + G IIGK G IK +++S A
Sbjct: 61 GAKAIITELLENNHTGEENPVDPATKDVVITMLVPEKTSGVIIGKGGENIKHMIEESGAK 120
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQT-MTVPYTYAGVFF 213
+K++ D GL++R++T G L RA+E+++ K+ E+ T ++ Y+
Sbjct: 121 MKLNSKDTKIPGLDERVLTCDGKLANAKRAMEMVMEKVLEEGAAGYTNISTQYSRVSGMG 180
Query: 214 SGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVG 273
G P +N + T + T+ V DE + ++G
Sbjct: 181 GMGGMGGMGGGIPRT---------------------SNISNPTVTYTVHVPDEVVPALLG 219
Query: 274 RGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+GG I E+ + SGA+I+VS +G+F GT+ R +TI+G Q S A +I K+
Sbjct: 220 KGGSVIREMMEASGAQIRVSQKGEFVPGTNHRIITITGNQHSASYAHQLISSKI 273
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 28/194 (14%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP K I LV +G +IGKGG I +SGA+++L+ PG +R++
Sbjct: 82 DPATKDVVITMLVPEKTSGVIIGKGGENIKHMIEESGAKMKLNSKDTKIPGLDERVLTCD 141
Query: 89 GTIDEILRAVDLVIDKLLTELHAE---------------------------DQADDVGTK 121
G + RA+++V++K+L E A + ++
Sbjct: 142 GKLANAKRAMEMVMEKVLEEGAAGYTNISTQYSRVSGMGGMGGMGGMGGGIPRTSNISNP 201
Query: 122 TKLRLI-VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
T + VP+ +++GK G+ I+ M+ S A I++S+ G N R++T+TG
Sbjct: 202 TVTYTVHVPDEVVPALLGKGGSVIREMMEASGAQIRVSQKGEFVPGTNHRIITITGNQHS 261
Query: 181 QMRALELILLKLSE 194
A +LI K+ +
Sbjct: 262 ASYAHQLISSKIPQ 275
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 183/368 (49%), Gaps = 76/368 (20%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ G+ + +L
Sbjct: 35 FLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAEALL 94
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT------------KTKLRLIVPNSSCGSIIGKAGAT 143
+ + +K + E+ +D+G + +LIVPN++ G IIGK GAT
Sbjct: 95 SVHNFIAEK-VREVPQGAPKNDLGVLLPPQSTINAERAKQAKLIVPNTTAGLIIGKGGAT 153
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQT-M 202
+++ M++S A +++S+ + L++R+VT++G + +A+ I+ K ED T +
Sbjct: 154 VRNIMEESGAWVQLSQ-KPAGSNLHERVVTVSGEPSQVQKAIHSIIHKSREDPPQGTTHL 212
Query: 203 TVPY--TYAGVFFSGFHGMPY--GAVPPPVP--------------------AVPHNTAAH 238
+ Y T V S G PY GA P + + NT A
Sbjct: 213 NISYINTQGPVANSNPTGSPYAGGAAEPVLTPFQPAPPAPPAISGGDLLAISAALNTLAS 272
Query: 239 YG--------PNMGG-----------------------------RKFQNNKDDRTNSLTI 261
YG P +GG K +L +
Sbjct: 273 YGYSTGMGYNPLVGGVHPAAVNLLASYTGEAGPSLGLGGGGILLEKMGAESVTGKETLEM 332
Query: 262 GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAES 321
V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+GP + + A+
Sbjct: 333 AVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGPPGATQAAQY 392
Query: 322 MIMQKVAY 329
+I Q+VAY
Sbjct: 393 LIGQRVAY 400
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRS------HEFFPGTTDRII 85
E+ + +V N AG +IGKGG+T+ + +SGA +QLS+ HE R++
Sbjct: 129 ERAKQAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQLSQKPAGSNLHE-------RVV 181
Query: 86 MISGTIDEILRAVDLVIDK 104
+SG ++ +A+ +I K
Sbjct: 182 TVSGEPSQVQKAIHSIIHK 200
>gi|428173185|gb|EKX42089.1| hypothetical protein GUITHDRAFT_74219, partial [Guillardia theta
CCMP2712]
Length = 268
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 151/281 (53%), Gaps = 33/281 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+FL SN AG +IG+GG+TI+ Q ++GARI++S +E++PGT +RI++++G + I+ A
Sbjct: 1 QFLASNKDAGTLIGRGGNTISSLQQRTGARIRVSNGNEYYPGTQNRIVLLTGQLSNIMGA 60
Query: 98 VDLVIDKLLTELHAE-------DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
++ + ++ + D D G L L VP SCG +IG+ G I+ +++
Sbjct: 61 LEGSLREIYGDFSGHSAPSPPGDDRDSNG--IMLTLAVPEISCGLLIGRGGENIRVMVEE 118
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
S I+++ DH G+ +RLV + G +D ++A+ELIL K+ ED P
Sbjct: 119 SGCKIQLTNKDHLVPGITERLVLVVGQIDRVLKAVELILYKMWED---------PKCRYD 169
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGF 270
+ ++ P A A N+ G Q + +S T+ V D +
Sbjct: 170 NPTTQYNSKPL--------ASDLTKAVR---NLQGSSMQPER----SSYTVHVPDNLVPA 214
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
++GRGG+ I E+ ++SGA IKVS +GDF GT+ R ++I G
Sbjct: 215 ILGRGGQIIKEMMEVSGATIKVSQKGDFVPGTNNRIISIIG 255
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 24/157 (15%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
G +IG+GG I +SG +IQL+ PG T+R++++ G ID +L+AV+L++ K+
Sbjct: 101 CGLLIGRGGENIRVMVEESGCKIQLTNKDHLVPGITERLVLVVGQIDRVLKAVELILYKM 160
Query: 106 L-----------TELHAEDQADDVGT-------------KTKLRLIVPNSSCGSIIGKAG 141
T+ +++ A D+ ++ + VP++ +I+G+ G
Sbjct: 161 WEDPKCRYDNPTTQYNSKPLASDLTKAVRNLQGSSMQPERSSYTVHVPDNLVPAILGRGG 220
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
IK M+ S A IK+S+ G N+R++++ G L
Sbjct: 221 QIIKEMMEVSGATIKVSQKGDFVPGTNNRIISIIGEL 257
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 43/203 (21%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ + N G++IG+ G TI S + A I++S + Y G +R+V LTG L M A
Sbjct: 1 QFLASNKDAGTLIGRGGNTISSLQQRTGARIRVSNGNEYYPGTQNRIVLLTGQLSNIMGA 60
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG 244
LE L ++ D FSG H P PP
Sbjct: 61 LEGSLREIYGD-----------------FSG-HSAP----SPP----------------- 81
Query: 245 GRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE 304
+++D LT+ V + G ++GRGG NI + + SG +I+++++ G +E
Sbjct: 82 ----GDDRDSNGIMLTLAVPEISCGLLIGRGGENIRVMVEESGCKIQLTNKDHLVPGITE 137
Query: 305 RKVTISGPQRSIRTAESMIMQKV 327
R V + G + A +I+ K+
Sbjct: 138 RLVLVVGQIDRVLKAVELILYKM 160
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 20 TAPVKSL--SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
T V++L SS E+ +Y + N L A++G+GG I + SGA I++S+ +F
Sbjct: 185 TKAVRNLQGSSMQPERSSYTVHVPDN-LVPAILGRGGQIIKEMMEVSGATIKVSQKGDFV 243
Query: 78 PGTTDRIIMISGTIDEIL 95
PGT +RII I G + L
Sbjct: 244 PGTNNRIISIIGELTPCL 261
>gi|224008600|ref|XP_002293259.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971385|gb|EED89720.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 296
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 166/312 (53%), Gaps = 41/312 (13%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T I+ LVSN +G +IG+ G TI++ Q+ S RI+LS+ +++PGT DR+ +I G++D
Sbjct: 1 TAIKLLVSNNSSGCIIGRSGKTISELQADSSTRIKLSQGGDYYPGTQDRVCLIQGSLDNA 60
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-QA 153
AV++++ KLL ++ V ++++VP SCG +IG+ G+ IKS ++S +
Sbjct: 61 RVAVEMILLKLLQVESIVNEFGSVAMPFTIQVLVPTPSCGMLIGRGGSNIKSIKEESGVS 120
Query: 154 VIKISRLDH----------SYYGLN------DRLVTLTGTLDEQMRALELILLKLSEDTL 197
I++S+ + S +N +R++T++G + ++ + LIL +++ +
Sbjct: 121 FIQLSQKEQDNNHTANAIMSNTAINTAATTSERIITISGCFESCVKCVLLILEEMASNPE 180
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN 257
S+ M + +Y+ V + + PP + P T+
Sbjct: 181 VSRYMNMTTSYSKVVAAQQSAATAQSSHPPSLSAP-----------------------TH 217
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG-PQRSI 316
S+ G+ + +GFV+GR G+ + ++ + S RI++S RG F GT++R +TI+G +
Sbjct: 218 SIQFGIPESMVGFVLGRRGKTLTQLQEQSQTRIRLSQRGVFLPGTNQRVLTITGNTAEHV 277
Query: 317 RTAESMIMQKVA 328
A+ +I Q+++
Sbjct: 278 ANAQYLINQRLS 289
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 43/204 (21%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR-IQLSRSHE----------------F 76
P I+ LV P G +IG+GGS I + +SG IQLS+ +
Sbjct: 87 PFTIQVLVPTPSCGMLIGRGGSNIKSIKEESGVSFIQLSQKEQDNNHTANAIMSNTAINT 146
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK------------- 123
T++RII ISG + ++ V L+++++ + + + +K
Sbjct: 147 AATTSERIITISGCFESCVKCVLLILEEMASNPEVSRYMNMTTSYSKVVAAQQSAATAQS 206
Query: 124 ------------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
++ +P S G ++G+ G T+ + SQ I++S+ G N R+
Sbjct: 207 SHPPSLSAPTHSIQFGIPESMVGFVLGRRGKTLTQLQEQSQTRIRLSQRGVFLPGTNQRV 266
Query: 172 VTLTGTLDEQM-RALELILLKLSE 194
+T+TG E + A LI +LSE
Sbjct: 267 LTITGNTAEHVANAQYLINQRLSE 290
>gi|221122019|ref|XP_002164819.1| PREDICTED: RNA-binding protein Nova-1-like [Hydra magnipapillata]
Length = 400
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 174/360 (48%), Gaps = 64/360 (17%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
TE ++ L+ N AGA+IGKGG+ I + QS+ GA+I+LS + EF+PGT +RI++++G
Sbjct: 41 TESTPLLKVLIPNYAAGAIIGKGGANIGELQSRYGAKIRLSPNGEFYPGTEERIVILTGD 100
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTK-----TKLRLIVPNSSCGSIIGKAGATIK 145
+ +I+ + +IDK +HA+ G + K++++ PN++ G +IG+ G+TIK
Sbjct: 101 VSQIIDLHNYIIDK----VHADSMEGPKGMRDEDRGQKVKIVCPNATAGLVIGRGGSTIK 156
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
S ++++A I IS D S + +R++T+ G ++++ A ++ K++ D +
Sbjct: 157 SLQEETKAKIMISGRDESKV-MGERIITIAGNTEQRIEASRQVIGKIAADAENMSNKNLT 215
Query: 206 YTYAGVFFSGFHGM--------------PYGAVPPPVPAVPHNTAA-------------- 237
Y+ +G +G + A+ + + HN +
Sbjct: 216 YSGSGRNSNGVSNYSHLGNNDIGQTLQGSFSALGSMLGNLQHNQKSQQLLSSLTQNPLAL 275
Query: 238 -----------------------HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
G N G N+ T S+ + + D +G ++G+
Sbjct: 276 LSQSGLANQLGLGGGSNSGGGFGQMGQNFGSV---TNQIKTTVSIQMEIPDVLVGAILGK 332
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
G+ + E Q SGA+I+ S + DF GT++R +TI G + A +I QK+ A + L
Sbjct: 333 HGKTVHEFIQFSGAKIQFSAKNDFAPGTTDRILTIQGDLNQTQIAYFLINQKIMQAENEL 392
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 152/306 (49%), Gaps = 72/306 (23%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 27 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 85
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 86 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 145
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A
Sbjct: 146 VKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA------------------- 185
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
V A+ AA + + I V
Sbjct: 186 ------------------------VSAIVQKLAAESAKEL---------------VEIAV 206
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+ +I
Sbjct: 207 PENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLI 266
Query: 324 MQKVAY 329
Q+V Y
Sbjct: 267 SQRVTY 272
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ +SG +++ +A
Sbjct: 127 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA 185
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
V ++ KL E K + + VP + G+I+GK G T+ + + + A I+I
Sbjct: 186 VSAIVQKLAAE----------SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 235
Query: 158 SRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
S+ G +R VT+TG+ A LI +++ + QT+
Sbjct: 236 SKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQGVFQTL 280
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 42/212 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 28 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 87
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAV--PHNTAAHYGP 241
I K+ E +P P V + P T
Sbjct: 88 VHSFIAEKVRE------------------------IPQAMTKPEVVNILQPQTTM----- 118
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 119 ----------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN- 167
Query: 302 TSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
ER VT+SG + A S I+QK+A S +
Sbjct: 168 LQERVVTVSGEPEQVHKAVSAIVQKLAAESAK 199
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P+ K +A V+ L+++ ++ + V L GA++GKGG T+ ++Q +GARIQ+S
Sbjct: 179 PEQVHKAVSAIVQKLAAESAKE--LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 236
Query: 72 RSHEFFPGTTDRIIMISGT 90
+ EF PGT +R + I+G+
Sbjct: 237 KKGEFLPGTRNRRVTITGS 255
>gi|312380039|gb|EFR26147.1| hypothetical protein AND_07973 [Anopheles darlingi]
Length = 552
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 117/200 (58%), Gaps = 9/200 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV + AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +ISGT+D IL
Sbjct: 42 HFKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKSHDFYPGTTERVCLISGTVDGIL 101
Query: 96 RAVDLVIDKL-----LTELHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSFMD 149
+D +IDK+ +T+ E A + K ++++VPNS+ G IIGKAGA IK +
Sbjct: 102 TVLDFIIDKIREKPDMTKALTEADAKQAQERDKQVKILVPNSTAGMIIGKAGAYIKQIKE 161
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 162 ESGSYVQISQKPKDLT-LQERCITIIGEKENNKVACKMILAKIVEDPSSGTCLNVSYADI 220
Query: 210 GVFFSGFH--GMPYGAVPPP 227
+ F+ G P+ A P
Sbjct: 221 NGPVANFNPTGSPFAASQTP 240
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I + + +GAR+K+S DF+ GT+ER ISG I T I+ K+
Sbjct: 53 GAIIGKGGETIASLQKDAGARVKMSKSHDFYPGTTERVCLISGTVDGILTVLDFIIDKI 111
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
GR+++EI ISGA I++S +G F GT R VTI+G +I A+ +I +++
Sbjct: 467 GRSLVEIQHISGANIQISKKGIFAPGTRNRIVTITGQPNAINVAQYLIEERI 518
>gi|170048061|ref|XP_001851517.1| nova [Culex quinquefasciatus]
gi|167870269|gb|EDS33652.1| nova [Culex quinquefasciatus]
Length = 534
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 118/203 (58%), Gaps = 15/203 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV + AGA+IGKGG TI Q +GAR+++S++H+F+PGT++R+ +ISGT+D IL
Sbjct: 28 HFKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTSERVCLISGTVDGIL 87
Query: 96 RAVDLVIDKL---------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+D +IDK+ LTE A+ A+ +++++VPNS+ G IIGKAGA IK
Sbjct: 88 TVLDFIIDKIREKPDMTKALTEADAKQAAER---DKQVKVLVPNSTAGMIIGKAGAFIKQ 144
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 145 IKEDSGSYVQISQKPKELT-LQERCITIIGEKENNKIACKMILSKIVEDPSSGSCLNVSY 203
Query: 207 TYAGVFFSGFH--GMPYGAVPPP 227
+ F+ G P+ A P
Sbjct: 204 ADINGPVANFNPTGSPFAASQNP 226
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 43/204 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ +VP+ + G+IIGK G TI S D+ A +K+S+ Y G ++R+ ++GT+D +
Sbjct: 29 FKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTSERVCLISGTVDGILT 88
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
L+ I+ K+ E ++ +T
Sbjct: 89 VLDFIIDKIREKPDMTKALT---------------------------------------- 108
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + + V + G ++G+ G I +I + SG+ +++S + +
Sbjct: 109 --EADAKQAAERDKQVKVLVPNSTAGMIIGKAGAFIKQIKEDSGSYVQISQKPKELT-LQ 165
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +TI G + + + A MI+ K+
Sbjct: 166 ERCITIIGEKENNKIACKMILSKI 189
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
GR+++EI +SGA I++S +G F GT R VTI+G +I A +I Q++
Sbjct: 450 GRSLVEIQHLSGANIQISKKGIFAPGTRNRIVTITGGPNAINVAHYLIEQRI 501
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V ++ +P Y FL GA G ++ + Q SGA IQ+S+ F PGT +
Sbjct: 419 VGAILGNPYLHSAYAPFLQCAFPMGAFDSPAGRSLVEIQHLSGANIQISKKGIFAPGTRN 478
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
RI+ I+G + I A L+ ++ E
Sbjct: 479 RIVTITGGPNAINVAHYLIEQRIQEE 504
>gi|156102214|ref|XP_001616800.1| RNA-binding protein Nova-1 [Plasmodium vivax Sal-1]
gi|148805674|gb|EDL47073.1| RNA-binding protein Nova-1, putative [Plasmodium vivax]
Length = 335
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 164/321 (51%), Gaps = 21/321 (6%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T + +++ LV+N +AG+VIGK GS I ++++G ++LS ++ +FP T +R++++ G
Sbjct: 14 TSQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGK 73
Query: 91 IDEILRAVDLVIDK---LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
++I A+ +++DK + T+ + Q + K R++VP S+ +IIGK G IK
Sbjct: 74 QEQINNALLIILDKIRQITTQNFQDKQNMNTSPKYTCRIVVPKSAVSAIIGKGGQQIKQL 133
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
D + A I+IS + GLN+R++++ G + + + D + V Y+
Sbjct: 134 QDTTGAKIQISSRED---GLNERIISIIGPFESISDTAIKVTNSIQNDPNLKDLLNVIYS 190
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG---------PNMGGRKFQNNKD--DRT 256
+G + V VP + YG NM ++++D +
Sbjct: 191 -KDANMNGRSSLSQNFV-NQVPLNGYVVPQQYGVFQHEQYMDVNMMNSLMRHSRDLFNLP 248
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
++I + DE IG V+G+ G + I +GA+I++S +G+ GT++RKV I G ++
Sbjct: 249 CEISIQIPDEFIGSVIGKNGARLTNIMNSTGAQIRISRKGELVPGTADRKVRIMGTVAAV 308
Query: 317 RTAESMIMQKV--AYASDRLM 335
A +++Q++ Y R M
Sbjct: 309 HAAHVLLLQRLESVYMQLRTM 329
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D P I + + G+VIGK G+ + + + +GA+I++SR E PGT DR +
Sbjct: 241 SRDLFNLPCEISIQIPDEFIGSVIGKNGARLTNIMNSTGAQIRISRKGELVPGTADRKVR 300
Query: 87 ISGTIDEILRAVDLVIDKL 105
I GT+ + A L++ +L
Sbjct: 301 IMGTVAAVHAAHVLLLQRL 319
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
++ + +P+ GS+IGK GA + + M+ + A I+ISR G DR V + GT+
Sbjct: 249 CEISIQIPDEFIGSVIGKNGARLTNIMNSTGAQIRISRKGELVPGTADRKVRIMGTVAAV 308
Query: 182 MRALELILLKLSEDTLYSQTMTV 204
A L+L +L + +TM V
Sbjct: 309 HAAHVLLLQRLESVYMQLRTMQV 331
>gi|307181420|gb|EFN69015.1| RNA-binding protein Nova-1 [Camponotus floridanus]
Length = 514
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 112/179 (62%), Gaps = 9/179 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+GT+D I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIM 105
Query: 96 RAVDLVIDKLLT--ELHAEDQAD-DVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSF 147
++ ++DK+ +L ++ D D G T +++++VPNS+ G IIGKAG IK
Sbjct: 106 EVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S + ++IS+ L +R +T+ G + RAL +IL K+++D + V Y
Sbjct: 166 KEESGSYVQISQKAKD-LSLQERCITVIGEKENNHRALHMILAKVADDPQSGTCLNVSY 223
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +K+S+ Y G +R+ +TGT+D M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIME 106
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+E I+ K+ E + TV F SG TA
Sbjct: 107 VMEFIMDKIREKPDLTSKTTVD------FDSG-----------------KATA------- 136
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+ G I +I + SG+ +++S + S
Sbjct: 137 ----------ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLS-LQ 185
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G + + A MI+ KVA
Sbjct: 186 ERCITVIGEKENNHRALHMILAKVA 210
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
NNK+ T + I +A+ +G ++G GGR ++EI +SGA I++S +G F GT R VTI
Sbjct: 421 NNKE--TKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 478
Query: 310 SGPQRSIRTAESMIMQKVA 328
+G +I TA+ +I Q+++
Sbjct: 479 TGYPNAINTAQYLIEQRIS 497
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
+HYG GG D T L + V G ++G+GG I ++ + +GAR+K+S
Sbjct: 35 SHYGS--GG--------DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSH 84
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
DF+ GT+ER I+G +I IM K+
Sbjct: 85 DFYPGTTERVCLITGTVDAIMEVMEFIMDKI 115
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 432 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAINTA-QY 490
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 491 LIEQRISEEEAK 502
>gi|68071447|ref|XP_677637.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497827|emb|CAH98378.1| conserved hypothetical protein [Plasmodium berghei]
Length = 337
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 161/329 (48%), Gaps = 28/329 (8%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V+++ D T + +++ L++N LAG++IGK G I+ ++++G ++LS ++ FFP T
Sbjct: 8 VQTIKGD-TNQLCFVKMLINNLLAGSIIGKNGEIISGIENKTGCSLKLSPNNSFFPNTQK 66
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
R+++I G ++I + +++DK+ +++++ R++VP S+ +IIGK G
Sbjct: 67 RVLVICGKQEQINNVIIIILDKIRQISLPNNKSENKIQTYTCRIVVPKSAVSAIIGKGGY 126
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
IK + + I+IS + YGL +R++T+ G + ++ + D +
Sbjct: 127 QIKQLQNITGTKIQISNRE---YGLYERIITIVGPFESIKDTATKVIASIQTDPNLKDLL 183
Query: 203 TVPY-------------------TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
V Y + F + H Y +P H + NM
Sbjct: 184 NVNYNKELNIETITKSNNRNDIRNMSHNFINHVHMGRY-IIPQQYGVFRH--EQYVDANM 240
Query: 244 GGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
+NN+D + + I + DE IG V+G+ G + I +GA+IK+S +G+ G
Sbjct: 241 MNYLMRNNRDLFNLPCEIFIEIPDEFIGSVIGKNGARLTNIMNSTGAQIKISRKGELVPG 300
Query: 302 TSERKVTISGPQRSIRTAESMIMQKVAYA 330
T +RK I G ++ A +++Q++ +A
Sbjct: 301 TFDRKTQIIGTVAAVHAAHVLVLQRLEFA 329
>gi|124808479|ref|XP_001348324.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
gi|23497216|gb|AAN36763.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
Length = 337
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 167/317 (52%), Gaps = 20/317 (6%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
+++ L++N +AG+VIGK GS I ++++G ++LS ++ +FP T +R++++ G ID+I
Sbjct: 19 CFVKLLINNLVAGSVIGKHGSIITSIENKTGCSLKLSPNNSYFPNTQERVLVLCGKIDQI 78
Query: 95 LRAVDLVIDKL--LTELHAEDQADDV--GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
A+ +++DK+ + H+ ++ + + K R++VP S+ +IIGK G IK D
Sbjct: 79 KDALLIILDKIKEVANQHSHEKQNMMNGAAKYTCRIVVPKSAVSAIIGKGGQQIKQLQDS 138
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALEL-ILLKLSEDTLYSQTMTVPYTYA 209
+ + I+IS + GLN+R++T+ G+ E +R L + + +D + V Y
Sbjct: 139 TGSKIQISSRED---GLNERIITIIGSF-ESIRDTALKVANSIQKDPNLKDLLNVIYNNE 194
Query: 210 GVFFSG-------FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD--DRTNSLT 260
++ + +P P + NM ++++D + ++
Sbjct: 195 SNNYNSRNNNHNFINQLPLNGYVLPQRYNVFQHEPYVDINMINSLMRHSRDLFNLPCEIS 254
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I + DE IG V+G+ G + I +GA+I++S +G+ GT+ RKV I G ++ A
Sbjct: 255 IQIPDEFIGAVIGKNGSRLTNIMNSTGAQIRISRKGELVPGTTNRKVRIIGSVAAVHAAH 314
Query: 321 SMIMQKV--AYASDRLM 335
+++Q++ AY R M
Sbjct: 315 VLLLQRLESAYMQLRTM 331
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D P I + + GAVIGK GS + + + +GA+I++SR E PGTT+R +
Sbjct: 243 SRDLFNLPCEISIQIPDEFIGAVIGKNGSRLTNIMNSTGAQIRISRKGELVPGTTNRKVR 302
Query: 87 ISGTIDEILRAVDLVIDKL 105
I G++ + A L++ +L
Sbjct: 303 IIGSVAAVHAAHVLLLQRL 321
>gi|332026626|gb|EGI66735.1| RNA-binding protein Nova-1 [Acromyrmex echinatior]
Length = 514
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 112/179 (62%), Gaps = 9/179 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+GT+D I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIM 105
Query: 96 RAVDLVIDKLLT--ELHAEDQAD-DVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSF 147
++ ++DK+ +L ++ D D G T +++++VPNS+ G IIGKAG IK
Sbjct: 106 EVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S + ++IS+ L +R +T+ G + RAL +IL K+++D + V Y
Sbjct: 166 KEESGSYVQISQKAKD-LSLQERCITVIGEKENNHRALHMILAKVADDPQSGTCLNVSY 223
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +K+S+ Y G +R+ +TGT+D M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIME 106
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+E I+ K+ E + TV F SG TA
Sbjct: 107 VMEFIMDKIREKPDLTSKTTVD------FDSG-----------------KATA------- 136
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+ G I +I + SG+ +++S + S
Sbjct: 137 ----------ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLS-LQ 185
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G + + A MI+ KVA
Sbjct: 186 ERCITVIGEKENNHRALHMILAKVA 210
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
NNK+ T + I +A+ +G ++G GGR ++EI +SGA I++S +G F GT R VTI
Sbjct: 421 NNKE--TKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 478
Query: 310 SGPQRSIRTAESMIMQKVA 328
+G +I TA+ +I Q+++
Sbjct: 479 TGYPNAINTAQYLIEQRIS 497
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
+HYG GG D T L + V G ++G+GG I ++ + +GAR+K+S
Sbjct: 35 SHYGS--GG--------DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSH 84
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
DF+ GT+ER I+G +I IM K+
Sbjct: 85 DFYPGTTERVCLITGTVDAIMEVMEFIMDKI 115
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A L
Sbjct: 432 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAINTAQYL 491
Query: 101 VIDKLLTE 108
+ ++ E
Sbjct: 492 IEQRISEE 499
>gi|195572282|ref|XP_002104125.1| GD18616 [Drosophila simulans]
gi|194200052|gb|EDX13628.1| GD18616 [Drosophila simulans]
Length = 330
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 144/298 (48%), Gaps = 73/298 (24%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+ + I+
Sbjct: 82 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIM 141
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
++ ++DK+ + ++ DV +K +++++VPNS+ G IIGK GA IK +
Sbjct: 142 VVMEFIMDKIREKPDLTNKIVDVESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKE 201
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 202 ESGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNV----- 255
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIG 269
YGPN GR V +H+
Sbjct: 256 ----------------------------SYGPN--GRSL--------------VEIQHV- 270
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
SGA +++S +G F GT R VTI+G +I A+ +I QK+
Sbjct: 271 ----------------SGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKI 312
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
D T + I V G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G
Sbjct: 78 DSTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 137
Query: 314 RSIRTAESMIMQKVAYASD 332
+I IM K+ D
Sbjct: 138 EAIMVVMEFIMDKIREKPD 156
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ + +R I
Sbjct: 166 SKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV-SLQERCIT 224
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNS-SCGSI-IGKAGATI 144
I G + A +++ K++ ED P S +C ++ G G ++
Sbjct: 225 IIGDKENNKNACKMILSKIV-----ED---------------PQSGTCLNVSYGPNGRSL 264
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A ++IS+ G +R+VT+TG +A LI K++E+
Sbjct: 265 VEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKINEE 315
>gi|322780737|gb|EFZ09994.1| hypothetical protein SINV_05815 [Solenopsis invicta]
Length = 483
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 112/179 (62%), Gaps = 9/179 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+GT+D I+
Sbjct: 15 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIM 74
Query: 96 RAVDLVIDKLLT--ELHAEDQAD-DVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSF 147
++ ++DK+ +L ++ D D G T +++++VPNS+ G IIGKAG IK
Sbjct: 75 EVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQI 134
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S + ++IS+ L +R +T+ G + RAL +IL K+++D + V Y
Sbjct: 135 KEESGSYVQISQKAKD-LSLQERCITVIGEKENNHRALHMILAKVADDPQSGTCLNVSY 192
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +K+S+ Y G +R+ +TGT+D M
Sbjct: 16 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIME 75
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+E I+ K+ E + TV F SG TA
Sbjct: 76 VMEFIMDKIREKPDLTSKTTVD------FDSG-----------------KATA------- 105
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+ G I +I + SG+ +++S + S
Sbjct: 106 ----------ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLS-LQ 154
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G + + A MI+ KVA
Sbjct: 155 ERCITVIGEKENNHRALHMILAKVA 179
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
NNK+ T + I +A+ +G ++G GGR ++EI +SGA I++S +G F GT R VTI
Sbjct: 390 NNKE--TKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 447
Query: 310 SGPQRSIRTAESMIMQKVA 328
+G +I TA+ +I Q+++
Sbjct: 448 TGYPNAINTAQYLIEQRIS 466
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
D T L + V G ++G+GG I ++ + +GAR+K+S DF+ GT+ER I+G
Sbjct: 11 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTV 70
Query: 314 RSIRTAESMIMQKV 327
+I IM K+
Sbjct: 71 DAIMEVMEFIMDKI 84
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 401 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAINTA-QY 459
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 460 LIEQRISEEEAK 471
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ LV N AG +IGK G+ I + +SG+ +Q+S+ + +R I + G
Sbjct: 106 ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDL-SLQERCITVIGEK 164
Query: 92 DEILRAVDLVIDKL 105
+ RA+ +++ K+
Sbjct: 165 ENNHRALHMILAKV 178
>gi|347968782|ref|XP_312014.5| AGAP002896-PA [Anopheles gambiae str. PEST]
gi|333467844|gb|EAA08028.5| AGAP002896-PA [Anopheles gambiae str. PEST]
Length = 537
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 9/200 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV + AGA+IGKGG TI Q +GAR+++S++H+F+PGTT+RI +ISGT++ IL
Sbjct: 25 HFKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTTERICLISGTVEGIL 84
Query: 96 RAVDLVIDKL-----LTELHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSFMD 149
+D + DK+ +T+ E A + K ++++VPN++ G IIGKAGA IK +
Sbjct: 85 AVLDFITDKIREKPDITKALTEADAKQAQERDKQVKILVPNTTAGMIIGKAGAYIKQIKE 144
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 145 ESGSYVQISQKPKDLT-LQERCITIIGEKENNRIACKMILAKIVEDPSSGTCLNVSYADI 203
Query: 210 GVFFSGFH--GMPYGAVPPP 227
+ F+ G P+ A P
Sbjct: 204 NGPVANFNPTGSPFAASQNP 223
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G GR+++EI ISGA I++S +G F GT R VTI+G Q +I A+ +I +++
Sbjct: 447 VGAILGPAGRSLVEIQHISGANIQISKKGIFAPGTRNRIVTITGQQNAINVAQYLIEERI 506
Query: 328 A 328
+
Sbjct: 507 S 507
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I + + +GAR+K+S DF+ GT+ER ISG I I K+
Sbjct: 36 GAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTTERICLISGTVEGILAVLDFITDKI 94
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 25 SLSSDPT--EKPTYIRFLVSNP--LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
SLS PT E T V P + GA++G G ++ + Q SGA IQ+S+ F PGT
Sbjct: 422 SLSKSPTPAEMTTSKEKNVEIPEVIVGAILGPAGRSLVEIQHISGANIQISKKGIFAPGT 481
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTE 108
+RI+ I+G + I A L+ +++ E
Sbjct: 482 RNRIVTITGQQNAINVAQYLIEERISQE 509
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ LV N AG +IGK G+ I + +SG+ +Q+S+ + +R I I G
Sbjct: 114 ERDKQVKILVPNTTAGMIIGKAGAYIKQIKEESGSYVQISQKPKDLT-LQERCITIIGEK 172
Query: 92 DEILRAVDLVIDKLL 106
+ A +++ K++
Sbjct: 173 ENNRIACKMILAKIV 187
>gi|390177068|ref|XP_003736271.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388858895|gb|EIM52344.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 125/233 (53%), Gaps = 25/233 (10%)
Query: 9 VPSPDVHGKRSTAPVKSLSSDPTEKPT------------YIRFLVSNPLAGAVIGKGGST 56
PSP++ R + L SDP + T +++ LV +GA+IGKGG T
Sbjct: 10 CPSPEIGDSRK----RPLDSDPENEQTKRSHFSSGETTYHMKILVPAVASGAIIGKGGET 65
Query: 57 INDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD 116
I Q +GAR+++S+SH+F+PGTT+R+ +I+G+ + I+ +D ++DK+ + +
Sbjct: 66 IASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIREKPDLTTKII 125
Query: 117 DVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDR 170
D +K +++++VPNS+ G IIGK GA IK +DS + ++IS+ L +R
Sbjct: 126 DAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKD-VSLQER 184
Query: 171 LVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH--GMPY 221
+T+ G + A ++IL K+ ED + V Y + F+ G PY
Sbjct: 185 CITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPTGSPY 237
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 460 DSKNVEVPEMIIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAI 519
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 520 AKAQFLIEQKI 530
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 56 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 115
Query: 329 YASD 332
D
Sbjct: 116 EKPD 119
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K
Sbjct: 470 IIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQK 529
Query: 105 LLTE 108
+ E
Sbjct: 530 ITEE 533
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G +
Sbjct: 134 ERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVS-LQERCITIIGDK 192
Query: 314 RSIRTAESMIMQKV 327
+ + A MI+ K+
Sbjct: 193 ENNKNACKMILSKI 206
>gi|391326103|ref|XP_003737564.1| PREDICTED: RNA-binding protein Nova-1-like [Metaseiulus
occidentalis]
Length = 430
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 117/200 (58%), Gaps = 15/200 (7%)
Query: 34 PTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
PTY + LV AGA+IGKGG TI Q GAR+++S+S++F+PGTT+R+ +I+GT++
Sbjct: 23 PTYHFKILVPAVAAGAIIGKGGETIAQVQKDCGARVKMSKSNDFYPGTTERVCLITGTVE 82
Query: 93 EILRAVDLVIDKLLTELHAE-------DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
I++ + ++DK+ + D + +++++VPNS+ G IIGK G+ IK
Sbjct: 83 GIVKIHNFIMDKIKEKPDPNSRTGVDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIK 142
Query: 146 SFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+DS I++S+ DH+ L +R +T+ G L+ +A++L+L K+ ED +
Sbjct: 143 QIKEDSNVYIQLSQKSRDHA---LAERSITIIGELEPTRKAVDLVLAKIVEDPQSGSCLN 199
Query: 204 VPYTYAGVFFSGFH--GMPY 221
V Y A + F+ G PY
Sbjct: 200 VSYADAQGPVANFNPTGSPY 219
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
V + +G ++G GG++++EI + SGA I++S +G F GT R V+I+G ++ TA +
Sbjct: 349 VGENIVGAILGPGGKHLVEIQRFSGASIQISKKGIFAPGTRNRIVSITGCPNAVATAHYL 408
Query: 323 IMQKVA 328
I Q VA
Sbjct: 409 IQQHVA 414
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL---SRSHEFFPGTTDRII 85
P E+ ++ LV N AG +IGKGGS I + S IQL SR H +R I
Sbjct: 113 QPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEDSNVYIQLSQKSRDHAL----AERSI 168
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I G ++ +AVDLV+ K++ +
Sbjct: 169 TIIGELEPTRKAVDLVLAKIVED 191
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I ++ + GAR+K+S DF+ GT+ER I+G I + IM K+
Sbjct: 37 GAIIGKGGETIAQVQKDCGARVKMSKSNDFYPGTTERVCLITGTVEGIVKIHNFIMDKIK 96
Query: 329 YASD 332
D
Sbjct: 97 EKPD 100
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + + A L
Sbjct: 349 VGENIVGAILGPGGKHLVEIQRFSGASIQISKKGIFAPGTRNRIVSITGCPNAVATAHYL 408
Query: 101 VIDKLLTELHAEDQAD 116
+ + E Q +
Sbjct: 409 IQQHVAEEEAKRSQQN 424
>gi|221060388|ref|XP_002260839.1| RNA-binding protein [Plasmodium knowlesi strain H]
gi|193810913|emb|CAQ42811.1| RNA-binding protein, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 165/321 (51%), Gaps = 21/321 (6%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T + +++ LV+N +AG+VIGK GS I ++++G ++LS ++ +FP T +R++++ G
Sbjct: 13 TNQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGK 72
Query: 91 IDEILRAVDLVIDKL--LTELHAEDQAD-DVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
++I A+ +++DK+ +T +D+ + + K R+++P S+ +IIGK G IK
Sbjct: 73 QEQINNALLIILDKIRQITVQSFQDKQNMNTVPKYTCRIVIPKSAASAIIGKGGQQIKQL 132
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
D + A I+IS + GLN+R++++ G + + + D + V Y
Sbjct: 133 QDSTGAKIQISSRED---GLNERIISIIGPFESISDTAIKVTNSIQNDPNLKDLLNVIYN 189
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG---------PNMGGRKFQNNKD--DRT 256
+G + V VP + YG NM ++++D +
Sbjct: 190 -KDTNMNGRSSLSQNFV-NQVPLNGYVVPQQYGVFQHEQYMDVNMMNSLMRHSRDLFNLP 247
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
++I + DE IG V+G+ G + I +GA+I++S +G+ GT++RKV I G ++
Sbjct: 248 CEISIQIPDEFIGSVIGKNGSRLTNIMNSTGAQIRISRKGELIPGTADRKVRIMGTVAAV 307
Query: 317 RTAESMIMQKV--AYASDRLM 335
A +++Q++ Y R M
Sbjct: 308 HGAHVLLLQRLESVYMQLRTM 328
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D P I + + G+VIGK GS + + + +GA+I++SR E PGT DR +
Sbjct: 240 SRDLFNLPCEISIQIPDEFIGSVIGKNGSRLTNIMNSTGAQIRISRKGELIPGTADRKVR 299
Query: 87 ISGTIDEILRAVDLVIDKL 105
I GT+ + A L++ +L
Sbjct: 300 IMGTVAAVHGAHVLLLQRL 318
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
++ + +P+ GS+IGK G+ + + M+ + A I+ISR G DR V + GT+
Sbjct: 248 CEISIQIPDEFIGSVIGKNGSRLTNIMNSTGAQIRISRKGELIPGTADRKVRIMGTVAAV 307
Query: 182 MRALELILLKLSEDTLYSQTMTV 204
A L+L +L + +TM V
Sbjct: 308 HGAHVLLLQRLESVYMQLRTMQV 330
>gi|427792957|gb|JAA61930.1| Putative pasilla, partial [Rhipicephalus pulchellus]
Length = 538
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 116/197 (58%), Gaps = 14/197 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV AGA+IGKGG TI Q ++GAR+++S+S++F+PGTT+R+ +I+G+++ +L
Sbjct: 39 HFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVL 98
Query: 96 RAVDLVIDKLLTELHAE-------DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
R + +++K+ + D + +++++VPNS+ G IIGK G+ IK
Sbjct: 99 RIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIK 158
Query: 149 DDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S A ++IS+ DH+ L +R +T+ G +D +A +LIL K+ ED + V Y
Sbjct: 159 EESGAYVQISQKSKDHA---LAERCITVIGEMDNNKKACQLILAKIVEDPQSGSCLHVSY 215
Query: 207 TYAGVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 216 AEVTGPVANFNPTGSPY 232
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 42/204 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+++VP + G+IIGK G TI ++ A +K+S+ + Y G +R+ +TG+++ +R
Sbjct: 40 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLR 99
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
E I+ K+ E P A + H P
Sbjct: 100 IHEFIMEKIKEK---------PDPTAKIAIDFDHKQPA---------------------- 128
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+GG I +I + SGA +++S + + +
Sbjct: 129 ----------EREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHA-LA 177
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +T+ G + + A +I+ K+
Sbjct: 178 ERCITVIGEMDNNKKACQLILAKI 201
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
V + +G ++G GG++++EI + SGA I++S +G F GT R V+I+G ++ TA+ +
Sbjct: 457 VGENIVGAILGPGGKSLVEIQRFSGAAIQISKKGTFAPGTRNRIVSITGTPNAVSTAQYL 516
Query: 323 IMQKVA 328
I Q++A
Sbjct: 517 IEQQIA 522
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 1 METNESSY------VPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGG 54
M N +S+ VPS G +P ++D V + GA++G GG
Sbjct: 414 MPVNNNSFGLGTALVPS---QGAMCKSPPPPSAADKCSDAVKRDLEVGENIVGAILGPGG 470
Query: 55 STINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQ 114
++ + Q SGA IQ+S+ F PGT +RI+ I+GT + + A L+ ++ E Q
Sbjct: 471 KSLVEIQRFSGAAIQISKKGTFAPGTRNRIVSITGTPNAVSTAQYLIEQQIAEEEAKRSQ 530
Query: 115 ADDVG 119
+ +G
Sbjct: 531 QNALG 535
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
P E+ ++ LV N AG +IGKGGS I + +SGA +Q+S+ + +R I +
Sbjct: 126 QPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDH-ALAERCITVI 184
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G +D +A L++ K++ +
Sbjct: 185 GEMDNNKKACQLILAKIVED 204
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G + IM+K+
Sbjct: 50 GAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLRIHEFIMEKIK 109
Query: 329 YASD 332
D
Sbjct: 110 EKPD 113
>gi|82540955|ref|XP_724754.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii 17XNL]
gi|23479512|gb|EAA16319.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii]
Length = 338
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 166/331 (50%), Gaps = 33/331 (9%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
+++ D T+ +++ L++N +AG++IGK G I+ ++++G ++LS ++ FFP T R
Sbjct: 9 QAIEEDRTQ-LCFVKMLINNLVAGSIIGKNGEIISGIENKTGCSLKLSPNNSFFPNTQKR 67
Query: 84 IIMISGTIDEILRAVDLVIDKL--LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
+++I G +I V +++DK+ ++ L + T T R++VP S+ +IIGK G
Sbjct: 68 VLVICGKKKQINNVVLIILDKIRQISSLANNKNEKKIKTYT-CRIVVPKSAVSAIIGKGG 126
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL----DEQMRALELIL----LKLS 193
IK + + I++S + GL +R++T+ G+ D + +E I LK
Sbjct: 127 YQIKQLQNKTGTKIQVSNRE---CGLYERIITIVGSFASIKDTATKVIEAIQTDPNLKDL 183
Query: 194 EDTLYSQTMTVP-----------YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY-GP 241
+ Y++ + + ++ F + H Y +P H HY
Sbjct: 184 LNVNYNKELNIETITKINNRNYIKKFSHNFINHVHMNRY-LIPQQYGIFQH---EHYVDA 239
Query: 242 NMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
NM +NN+D + ++I + D+ IG V+G+ G + I +GA+IK+S +G+
Sbjct: 240 NMINYLMRNNRDLFNLQCEISIEIPDKFIGSVIGKNGSRLTNIMNSTGAKIKISKKGELI 299
Query: 300 SGTSERKVTISGPQRSIRTAESMIMQKVAYA 330
GT +RK I G ++ A +++Q + A
Sbjct: 300 PGTFDRKTKIIGTVAAVHAAHVLVLQCLESA 330
>gi|270009705|gb|EFA06153.1| hypothetical protein TcasGA2_TC008998 [Tribolium castaneum]
Length = 564
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 110/177 (62%), Gaps = 7/177 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV + AGA+IGKGG TI Q ++GAR+++S+SH+F+PGTT+R+ +I+G++D I+
Sbjct: 46 HFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIM 105
Query: 96 RAVDLVIDKL-----LTELHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSFMD 149
D + DK+ LT+ E ++ + + K ++++VPNS+ G IIGKAG IK +
Sbjct: 106 VVADFIADKIREKPDLTKPLVETESKLMQDRDKQVKILVPNSTAGMIIGKAGNYIKQIKE 165
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
S + ++IS+ L +R +T+ G ++ +A ++IL K+ ED + V Y
Sbjct: 166 TSGSYVQISQ-KAKDVSLQERCITVIGEKEQNRQACQMILAKIVEDPQSGTCLNVSY 221
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+H+ FV G GGR+++EI Q+SGA I++S +G F GT R VTI+G +SI TA+ +I Q
Sbjct: 484 KHLVFVAGPGGRSLVEIQQLSGANIQISKKGIFAPGTRNRIVTITGSPQSINTAQYLIEQ 543
Query: 326 KVA 328
+++
Sbjct: 544 RIS 546
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I ++ + +GAR+K+S DF+ GT+ER I+G +I I K+
Sbjct: 57 GAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIMVVADFIADKI 115
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 49 VIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
V G GG ++ + Q SGA IQ+S+ F PGT +RI+ I+G+ I A L+ ++ E
Sbjct: 489 VAGPGGRSLVEIQQLSGANIQISKKGIFAPGTRNRIVTITGSPQSINTAQYLIEQRISEE 548
Query: 109 LHAEDQADDVGTKT 122
+ + +GT T
Sbjct: 549 ELKRARNNGLGTLT 562
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
DR + I V + G ++G+ G I +I + SG+ +++S + S ER +T+ G +
Sbjct: 135 DRDKQVKILVPNSTAGMIIGKAGNYIKQIKETSGSYVQISQKAKDVS-LQERCITVIGEK 193
Query: 314 RSIRTAESMIMQKV 327
R A MI+ K+
Sbjct: 194 EQNRQACQMILAKI 207
>gi|189239335|ref|XP_973573.2| PREDICTED: similar to pasilla CG16765-PK [Tribolium castaneum]
Length = 535
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 110/177 (62%), Gaps = 7/177 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV + AGA+IGKGG TI Q ++GAR+++S+SH+F+PGTT+R+ +I+G++D I+
Sbjct: 46 HFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIM 105
Query: 96 RAVDLVIDKL-----LTELHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSFMD 149
D + DK+ LT+ E ++ + + K ++++VPNS+ G IIGKAG IK +
Sbjct: 106 VVADFIADKIREKPDLTKPLVETESKLMQDRDKQVKILVPNSTAGMIIGKAGNYIKQIKE 165
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
S + ++IS+ L +R +T+ G ++ +A ++IL K+ ED + V Y
Sbjct: 166 TSGSYVQISQKAKD-VSLQERCITVIGEKEQNRQACQMILAKIVEDPQSGTCLNVSY 221
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 51/72 (70%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + +A+ +G ++G GGR+++EI Q+SGA I++S +G F GT R VTI+G +SI
Sbjct: 446 DSKNVEIAEVIVGAILGPGGRSLVEIQQLSGANIQISKKGIFAPGTRNRIVTITGSPQSI 505
Query: 317 RTAESMIMQKVA 328
TA+ +I Q+++
Sbjct: 506 NTAQYLIEQRIS 517
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG ++ + Q SGA IQ+S+ F PGT +RI+ I+G+ I A L
Sbjct: 452 IAEVIVGAILGPGGRSLVEIQQLSGANIQISKKGIFAPGTRNRIVTITGSPQSINTAQYL 511
Query: 101 VIDKLLTELHAEDQADDVGTKT 122
+ ++ E + + +GT T
Sbjct: 512 IEQRISEEELKRARNNGLGTLT 533
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I ++ + +GAR+K+S DF+ GT+ER I+G +I I K+
Sbjct: 57 GAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIMVVADFIADKI 115
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
DR + I V + G ++G+ G I +I + SG+ +++S + S ER +T+ G +
Sbjct: 135 DRDKQVKILVPNSTAGMIIGKAGNYIKQIKETSGSYVQISQKAKDVS-LQERCITVIGEK 193
Query: 314 RSIRTAESMIMQKV 327
R A MI+ K+
Sbjct: 194 EQNRQACQMILAKI 207
>gi|427792951|gb|JAA61927.1| Putative rna-binding protein nova1/pasilla, partial [Rhipicephalus
pulchellus]
Length = 448
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 116/197 (58%), Gaps = 14/197 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV AGA+IGKGG TI Q ++GAR+++S+S++F+PGTT+R+ +I+G+++ +L
Sbjct: 39 HFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVL 98
Query: 96 RAVDLVIDKLLTELHAE-------DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
R + +++K+ + D + +++++VPNS+ G IIGK G+ IK
Sbjct: 99 RIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIK 158
Query: 149 DDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S A ++IS+ DH+ L +R +T+ G +D +A +LIL K+ ED + V Y
Sbjct: 159 EESGAYVQISQKSKDHA---LAERCITVIGEMDNNKKACQLILAKIVEDPQSGSCLHVSY 215
Query: 207 TYAGVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 216 AEVTGPVANFNPTGSPY 232
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 42/204 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+++VP + G+IIGK G TI ++ A +K+S+ + Y G +R+ +TG+++ +R
Sbjct: 40 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLR 99
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
E I+ K+ E P A + H P
Sbjct: 100 IHEFIMEKIKEK---------PDPTAKIAIDFDHKQP----------------------- 127
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+GG I +I + SGA +++S + + +
Sbjct: 128 ---------AEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHA-LA 177
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +T+ G + + A +I+ K+
Sbjct: 178 ERCITVIGEMDNNKKACQLILAKI 201
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
P E+ ++ LV N AG +IGKGGS I + +SGA +Q+S+ + +R I +
Sbjct: 126 QPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDH-ALAERCITVI 184
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G +D +A L++ K++ +
Sbjct: 185 GEMDNNKKACQLILAKIVED 204
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G + IM+K+
Sbjct: 50 GAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLRIHEFIMEKIK 109
Query: 329 YASD 332
D
Sbjct: 110 EKPD 113
>gi|195388678|ref|XP_002053006.1| GJ23641 [Drosophila virilis]
gi|194151092|gb|EDW66526.1| GJ23641 [Drosophila virilis]
Length = 574
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 67 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIM 126
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
VD ++DK+ + + D +K +++++VPNS+ G IIGK GA IK +
Sbjct: 127 TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKE 186
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 187 ESGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADV 245
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 246 NGPVANFNPTGSPY 259
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 43/204 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++++VP + G+IIGK G TI S D+ A +K+S+ Y G +R+ +TG+++ M
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMT 127
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ I+ K+ E + + +
Sbjct: 128 VVDFIMDKIREKPDLTTKI----------------------------------------I 147
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
Q + D+ + I V + G ++G+GG I +I + SG+ +++S + S
Sbjct: 148 DAESKQAQERDK--QVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS-LQ 204
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +TI G + + + A MI+ K+
Sbjct: 205 ERCITIIGDKENNKNACKMILSKI 228
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
IG V+G GR+++EI +SGA +++S +G F GT R VTI+G +I A+ +I QK+
Sbjct: 497 IGAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKI 556
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G I T IM K+
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMTVVDFIMDKIR 137
Query: 329 YASD 332
D
Sbjct: 138 EKPD 141
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GAV+G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 496 IIGAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 555
Query: 105 LLTE 108
+ E
Sbjct: 556 INEE 559
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV- 201
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLL 106
+R I I G + A +++ K++
Sbjct: 202 SLQERCITIIGDKENNKNACKMILSKIV 229
>gi|195107855|ref|XP_001998509.1| GI24011 [Drosophila mojavensis]
gi|193915103|gb|EDW13970.1| GI24011 [Drosophila mojavensis]
Length = 574
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 67 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIM 126
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
VD ++DK+ + + D +K +++++VPNS+ G IIGK GA IK +
Sbjct: 127 TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKE 186
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 187 ESGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADV 245
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 246 NGPVANFNPTGSPY 259
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 43/204 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++++VP + G+IIGK G TI S D+ A +K+S+ Y G +R+ +TG+++ M
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMT 127
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ I+ K+ E + + +
Sbjct: 128 VVDFIMDKIREKPDLTTKI----------------------------------------I 147
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
Q + D+ + I V + G ++G+GG I +I + SG+ +++S + S
Sbjct: 148 DAESKQAQERDK--QVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS-LQ 204
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +TI G + + + A MI+ K+
Sbjct: 205 ERCITIIGDKENNKNACKMILSKI 228
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
IG V+G GR+++EI SGA +++S +G F GT R VTI+G +I A+ +I QK+
Sbjct: 497 IGAVLGPNGRSLVEIQHASGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKI 556
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G I T IM K+
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMTVVDFIMDKIR 137
Query: 329 YASD 332
D
Sbjct: 138 EKPD 141
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GAV+G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 496 IIGAVLGPNGRSLVEIQHASGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 555
Query: 105 LLTE 108
+ E
Sbjct: 556 INEE 559
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV- 201
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLL 106
+R I I G + A +++ K++
Sbjct: 202 SLQERCITIIGDKENNKNACKMILSKIV 229
>gi|195037250|ref|XP_001990077.1| GH18435 [Drosophila grimshawi]
gi|193894273|gb|EDV93139.1| GH18435 [Drosophila grimshawi]
Length = 569
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 67 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIM 126
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
VD ++DK+ + + D +K +++++VPNS+ G IIGK GA IK +
Sbjct: 127 TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKE 186
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 187 ESGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADV 245
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 246 NGPVANFNPTGSPY 259
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 45/205 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++++VP + G+IIGK G TI S D+ A +K+S+ Y G +R+ +TG+++ M
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMT 127
Query: 184 ALELILLKLSEDT-LYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
++ I+ K+ E L ++ + A
Sbjct: 128 VVDFIMDKIREKPDLTTKIIDAESKQA--------------------------------- 154
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
+R + I V + G ++G+GG I +I + SG+ +++S + S
Sbjct: 155 ----------QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS-L 203
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER +TI G + + + A MI+ K+
Sbjct: 204 QERCITIIGDKENNKNACKMILSKI 228
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
IG V+G GR+++EI +SGA +++S +G F GT R VTI+G +I A+ +I QK+
Sbjct: 498 IGAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQKI 557
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G I T IM K+
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMTVVDFIMDKIR 137
Query: 329 YASD 332
D
Sbjct: 138 EKPD 141
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GAV+G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K
Sbjct: 497 IIGAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQK 556
Query: 105 LLTE 108
+ E
Sbjct: 557 INEE 560
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV- 201
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLL 106
+R I I G + A +++ K++
Sbjct: 202 SLQERCITIIGDKENNKNACKMILSKIV 229
>gi|161078122|ref|NP_001036695.1| pasilla, isoform K [Drosophila melanogaster]
gi|320542560|ref|NP_001189201.1| pasilla, isoform P [Drosophila melanogaster]
gi|320542562|ref|NP_001189202.1| pasilla, isoform M [Drosophila melanogaster]
gi|113194763|gb|ABI31152.1| pasilla, isoform K [Drosophila melanogaster]
gi|318068745|gb|ADV37292.1| pasilla, isoform P [Drosophila melanogaster]
gi|318068746|gb|ADV37293.1| pasilla, isoform M [Drosophila melanogaster]
Length = 550
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 126/233 (54%), Gaps = 25/233 (10%)
Query: 9 VPSPDVHGKRSTAPVKSLSSDPTEKPT------------YIRFLVSNPLAGAVIGKGGST 56
PSP+ R + L SDP + T +++ LV +GA+IGKGG T
Sbjct: 10 CPSPETGDSRK----RPLDSDPENEQTKRSHFSSGETTYHMKILVPAVASGAIIGKGGET 65
Query: 57 INDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD 116
I Q +GAR+++S+SH+F+PGTT+R+ +I+G+ + I+ ++ ++DK+ + ++
Sbjct: 66 IASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIV 125
Query: 117 DVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDR 170
D +K +++++VPNS+ G IIGK GA IK ++S + ++IS+ + L +R
Sbjct: 126 DTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ-KPTDVSLQER 184
Query: 171 LVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH--GMPY 221
+T+ G + A ++IL K+ ED + V Y + F+ G PY
Sbjct: 185 CITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPTGSPY 237
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 462 DSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 521
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 522 AKAQYLIEQKI 532
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 56 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIR 115
Query: 329 YASD 332
D
Sbjct: 116 EKPD 119
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 472 IIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 531
Query: 105 LLTE 108
+ E
Sbjct: 532 INEE 535
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G +
Sbjct: 134 ERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGDK 192
Query: 314 RSIRTAESMIMQKV 327
+ + A MI+ K+
Sbjct: 193 ENNKNACKMILSKI 206
>gi|242002844|ref|XP_002436065.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
gi|215499401|gb|EEC08895.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
Length = 474
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 122/220 (55%), Gaps = 22/220 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV AGA+IGKGG TI Q ++GAR+++S+S++F+PGTT+R+ +I+G+++ +L
Sbjct: 51 HFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVL 110
Query: 96 RAVDLVIDKLLTELHAE-------DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
R + +++K+ + D + +++++VPNS+ G IIGK G+ IK
Sbjct: 111 RIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIK 170
Query: 149 DDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S A ++IS+ DH+ L +R +T+ G L+ +A +IL K+ ED + V Y
Sbjct: 171 EESGAYVQISQKSKDHA---LAERCITVIGELENNKKACHMILAKIVEDPQSGSCLHVSY 227
Query: 207 TYAGVFFSGFH--GMPYG--------AVPPPVPAVPHNTA 236
+ F+ G PY + P PAV N A
Sbjct: 228 AEVTGPVANFNPTGSPYANPSSSLVPSFPGVAPAVAGNVA 267
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 42/204 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+++VP + G+IIGK G TI ++ A +K+S+ + Y G +R+ +TG+++ +R
Sbjct: 52 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLR 111
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
E I+ K+ E P A + H P
Sbjct: 112 IHEFIMEKIKEK---------PDPTAKIAIDFDHKQPA---------------------- 140
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+GG I +I + SGA +++S + + +
Sbjct: 141 ----------EREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHA-LA 189
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +T+ G + + A MI+ K+
Sbjct: 190 ERCITVIGELENNKKACHMILAKI 213
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P GG + D L +G + +G ++G GG++++EI + SGA I++S +G F
Sbjct: 373 PPPGGAVAEKAGDAVKRDLEVG--ENIVGAILGPGGKSLVEIQRFSGAAIQISKKGIFAP 430
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKVA 328
GT R VTI+G ++ TA+ +I Q++A
Sbjct: 431 GTRNRIVTITGSPNAVSTAQYLIEQQIA 458
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + GA++G GG ++ + Q SGA IQ+S+ F PGT +RI+ I+G+ + + A L
Sbjct: 393 VGENIVGAILGPGGKSLVEIQRFSGAAIQISKKGIFAPGTRNRIVTITGSPNAVSTAQYL 452
Query: 101 VIDKLLTELHAEDQADDVG 119
+ ++ E Q + +G
Sbjct: 453 IEQQIAEEEAKRSQQNALG 471
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
P E+ ++ LV N AG +IGKGGS I + +SGA +Q+S+ + +R I +
Sbjct: 138 QPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDH-ALAERCITVI 196
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G ++ +A +++ K++ +
Sbjct: 197 GELENNKKACHMILAKIVED 216
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G + IM+K+
Sbjct: 62 GAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLRIHEFIMEKIK 121
Query: 329 YASD 332
D
Sbjct: 122 EKPD 125
>gi|125773159|ref|XP_001357838.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|54637571|gb|EAL26973.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 570
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 113/198 (57%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 123 EAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 182
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 183 QIKEDSGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 241
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 242 YADVSGPVANFNPTGSPY 259
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 482 DSKNVEVPEMIIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAI 541
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 542 AKAQFLIEQKI 552
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 137
Query: 329 YASD 332
D
Sbjct: 138 EKPD 141
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K
Sbjct: 492 IIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQK 551
Query: 105 LLTE 108
+ E
Sbjct: 552 ITEE 555
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDV- 201
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLL 106
+R I I G + A +++ K++
Sbjct: 202 SLQERCITIIGDKENNKNACKMILSKIV 229
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G +
Sbjct: 156 ERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVS-LQERCITIIGDK 214
Query: 314 RSIRTAESMIMQKV 327
+ + A MI+ K+
Sbjct: 215 ENNKNACKMILSKI 228
>gi|390177070|ref|XP_003736272.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
gi|388858896|gb|EIM52345.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
Length = 800
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 9/199 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 261 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 320
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 321 EAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 380
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 381 QIKEDSGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 439
Query: 206 YTYAGVFFSGFH--GMPYG 222
Y + F+ G PY
Sbjct: 440 YADVSGPVANFNPTGSPYA 458
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 712 DSKNVEVPEMIIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAI 771
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 772 AKAQFLIEQKI 782
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 276 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKI 334
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K
Sbjct: 722 IIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQK 781
Query: 105 LLTE 108
+ E
Sbjct: 782 ITEE 785
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 341 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDV- 399
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLL 106
+R I I G + A +++ K++
Sbjct: 400 SLQERCITIIGDKENNKNACKMILSKIV 427
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 353 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVS-LQERCITIIGD 411
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 412 KENNKNACKMILSKI 426
>gi|390177064|ref|XP_003736269.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858893|gb|EIM52342.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 554
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 115/208 (55%), Gaps = 9/208 (4%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P L E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT
Sbjct: 37 PSFQLQQSFCETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTT 96
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGS 135
+R+ +I+G+ + I+ +D ++DK+ + + D +K +++++VPNS+ G
Sbjct: 97 ERVCLITGSTEAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGM 156
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
IIGK GA IK +DS + ++IS+ L +R +T+ G + A ++IL K+ ED
Sbjct: 157 IIGKGGAFIKQIKEDSGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVED 215
Query: 196 TLYSQTMTVPYTYAGVFFSGFH--GMPY 221
+ V Y + F+ G PY
Sbjct: 216 PQSGTCLNVSYADVSGPVANFNPTGSPY 243
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 466 DSKNVEVPEMIIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAI 525
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 526 AKAQFLIEQKI 536
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 62 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 121
Query: 329 YASD 332
D
Sbjct: 122 EKPD 125
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K
Sbjct: 476 IIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQK 535
Query: 105 LLTE 108
+ E
Sbjct: 536 ITEE 539
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 127 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDV- 185
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLL 106
+R I I G + A +++ K++
Sbjct: 186 SLQERCITIIGDKENNKNACKMILSKIV 213
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 139 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVS-LQERCITIIGD 197
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 198 KENNKNACKMILSKI 212
>gi|195499424|ref|XP_002096942.1| GE25952 [Drosophila yakuba]
gi|194183043|gb|EDW96654.1| GE25952 [Drosophila yakuba]
Length = 572
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ DV +K +++++VPNS+ G IIGK GA IK
Sbjct: 123 EAIMVVLEFIMDKIREKPDLTNKIVDVESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 182
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 183 QIKEESGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 241
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 242 YADVSGPVANFNPTGSPY 259
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++++VP + G+IIGK G TI S D+ A +K+S+ Y G +R+ +TG+ + M
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 127
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
LE I+ K+ E + + ++
Sbjct: 128 VLEFIMDKIREKPDLTNKIV--------------------------------------DV 149
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
++ Q +R + I V + G ++G+GG I +I + SG+ +++S + S
Sbjct: 150 ESKQTQ----ERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS-LQ 204
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +TI G + + + A MI+ K+
Sbjct: 205 ERCITIIGDKENNKNACKMILSKI 228
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 484 DSKNVEVPEVIIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 543
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 544 AKAQYLIEQKI 554
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLEFIMDKIR 137
Query: 329 YASD 332
D
Sbjct: 138 EKPD 141
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 494 IIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 553
Query: 105 LLTE 108
+ E
Sbjct: 554 INEE 557
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ + +R I
Sbjct: 151 SKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV-SLQERCIT 209
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I G + A +++ K++
Sbjct: 210 IIGDKENNKNACKMILSKIV 229
>gi|195330414|ref|XP_002031899.1| GM23807 [Drosophila sechellia]
gi|194120842|gb|EDW42885.1| GM23807 [Drosophila sechellia]
Length = 572
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 114/194 (58%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+ + I+
Sbjct: 67 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIM 126
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKAGATIKSFMD 149
++ ++DK+ + ++ DV +K +++++VPNS+ G IIGK GA IK +
Sbjct: 127 VVMEFIMDKIREKPDLTNKIVDVESKQTQERDRQVKILVPNSTAGMIIGKGGAFIKQIKE 186
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 187 ESGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADV 245
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 246 SGPVANFNPTGSPY 259
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 43/208 (20%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
T ++++VP + G+IIGK G TI S D+ A +K+S+ Y G +R+ +TG+ +
Sbjct: 64 TTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTE 123
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
M +E I+ K+ E + +
Sbjct: 124 AIMVVMEFIMDKIREKPDLTNKIV------------------------------------ 147
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
++ ++ Q +R + I V + G ++G+GG I +I + SG+ +++S +
Sbjct: 148 --DVESKQTQ----ERDRQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV 201
Query: 300 SGTSERKVTISGPQRSIRTAESMIMQKV 327
S ER +TI G + + + A MI+ K+
Sbjct: 202 S-LQERCITIIGDKENNKNACKMILSKI 228
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 484 DSKNVEVPEVIIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 543
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 544 AKAQYLIEQKI 554
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
D T + I V G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G
Sbjct: 63 DTTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 314 RSIRTAESMIMQKVAYASD 332
+I IM K+ D
Sbjct: 123 EAIMVVMEFIMDKIREKPD 141
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 494 IIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 553
Query: 105 LLTE 108
+ E
Sbjct: 554 INEE 557
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ + +R I I G
Sbjct: 156 ERDRQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV-SLQERCITIIGDK 214
Query: 92 DEILRAVDLVIDKLL 106
+ A +++ K++
Sbjct: 215 ENNKNACKMILSKIV 229
>gi|390177066|ref|XP_003736270.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388858894|gb|EIM52343.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 576
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 113/198 (57%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 69 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 128
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 129 EAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 188
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 189 QIKEDSGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 247
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 248 YADVSGPVANFNPTGSPY 265
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 488 DSKNVEVPEMIIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAI 547
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 548 AKAQFLIEQKI 558
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 84 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 143
Query: 329 YASD 332
D
Sbjct: 144 EKPD 147
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K
Sbjct: 498 IIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQK 557
Query: 105 LLTE 108
+ E
Sbjct: 558 ITEE 561
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 149 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDV- 207
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLL 106
+R I I G + A +++ K++
Sbjct: 208 SLQERCITIIGDKENNKNACKMILSKIV 235
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 161 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVS-LQERCITIIGD 219
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 220 KENNKNACKMILSKI 234
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 115/199 (57%), Gaps = 14/199 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 58 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 117
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATI 144
D + +K+ + + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 118 NVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATV 177
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 178 KAVMEQSGAWVQLSQKPDG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 236
Query: 205 PYTYAG--VFFSGFHGMPY 221
Y+ V S G PY
Sbjct: 237 SYSNISGPVANSNPTGSPY 255
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G + + A+
Sbjct: 415 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQAAQ 474
Query: 321 SMIMQKVAY 329
+I Q++ Y
Sbjct: 475 YLISQRITY 483
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNN 118
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+ I K+ E +Q T P + P V P
Sbjct: 119 VHDFIAEKVREMPQSAQK-TEPVSIL---------QPQTTVNP----------------- 151
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + D +
Sbjct: 152 ----------DRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGIN-LQ 200
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VTISG R A +I+QK+
Sbjct: 201 ERVVTISGEPEQNRKAVEIIVQKI 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 413 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQA 472
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 473 AQYLISQRITYE 484
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I
Sbjct: 391 ASPLVASSLLATEKLAE------GAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARI 444
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+IS+ G +R VT+TG+ A LI +++
Sbjct: 445 QISKKGEFVPGTRNRKVTITGSPAATQAAQYLISQRIT 482
>gi|345495410|ref|XP_001602171.2| PREDICTED: hypothetical protein LOC100118119 [Nasonia vitripennis]
Length = 533
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 121/215 (56%), Gaps = 18/215 (8%)
Query: 9 VPSPDVHGKRSTAPVKSLSSDPTEKPTY---------IRFLVSNPLAGAVIGKGGSTIND 59
PSP++ R + + T++ Y ++ LV AGA+IGKGG TI
Sbjct: 10 CPSPEIADSRKRPLDCDVENGATKRSHYGTGGDGTYHLKVLVPGVAAGAIIGKGGETIAQ 69
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT--ELHAEDQAD- 116
Q +GAR+++S+SH+F+PGTT+R+ +I+G++D I+ +D +++K+ +L + D
Sbjct: 70 LQKDTGARVKMSKSHDFYPGTTERVCLITGSVDAIMAVMDFIMEKIREKPDLTTKTTVDF 129
Query: 117 DVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
D G T +++++VPNS+ G IIGKAG IK ++S + ++IS+ L +R
Sbjct: 130 DSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKD-VSLQERC 188
Query: 172 VTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+T+ G + AL +IL K+++D + V Y
Sbjct: 189 ITVIGEKENNRNALLMILAKVADDPQSGTCLNVSY 223
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 41/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +K+S+ Y G +R+ +TG++D M
Sbjct: 47 LKVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSVDAIMA 106
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ I+ K+ E + TV F SG TA
Sbjct: 107 VMDFIMEKIREKPDLTTKTTVD------FDSG-----------------KATA------- 136
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+ G I +I + SG+ +++S + S
Sbjct: 137 ----------ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVS-LQ 185
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G + + R A MI+ KVA
Sbjct: 186 ERCITVIGEKENNRNALLMILAKVA 210
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I +A+ +G ++G GGRN++EI +SGA I++S +G F GT R VTI+G +IRTA
Sbjct: 449 IEIAEVIVGAILGPGGRNLIEIQHLSGANIQISKKGIFAPGTRNRIVTITGFPDAIRTAH 508
Query: 321 SMIMQKVA 328
+I +++
Sbjct: 509 YLIEHRIS 516
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
+HYG GG D T L + V G ++G+GG I ++ + +GAR+K+S
Sbjct: 35 SHYG--TGG--------DGTYHLKVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSH 84
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASD 332
DF+ GT+ER I+G +I IM+K+ D
Sbjct: 85 DFYPGTTERVCLITGSVDAIMAVMDFIMEKIREKPD 120
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G D I R
Sbjct: 451 IAEVIVGAILGPGGRNLIEIQHLSGANIQISKKGIFAPGTRNRIVTITGFPDAI-RTAHY 509
Query: 101 VIDKLLTELHAE 112
+I+ ++E A+
Sbjct: 510 LIEHRISEEEAK 521
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 40/323 (12%)
Query: 30 PTEKPTY---IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
P E P+ IR ++ G++IGK G TI F+ +SGARI +S + +RI+
Sbjct: 12 PGEAPSVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDGS-----SPERIVT 66
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIK 145
I+G+ + IL+A +++ K ++ A V LRLIVP S CGS+IGK G+ IK
Sbjct: 67 ITGSTENILKAFNMIGKKFEEDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSKIK 126
Query: 146 SFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+ + A I+++ L +S +R VT++GT D + + I + E + T
Sbjct: 127 EIREVTGASIQVAGDMLPNS----TERAVTVSGTPDAISQCVYHICCVMLESP--PKGAT 180
Query: 204 VPY---------TYAGVFFSG-----FHGMPYGAVP--PPVPAVPHNTAAHYGPNMGGRK 247
+PY T V F+G H + P P +P A +G +
Sbjct: 181 IPYKPRPASGTSTSGPVVFAGGQLTKLHQLALQQTPYITPGTTLPAALATQFGVQTASQP 240
Query: 248 FQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKV 307
N +T+ LTI +E IG ++G+GG I EI Q SGA IK++ + G+++R+V
Sbjct: 241 --GNPSSQTHELTI--PNELIGCIIGKGGCKINEIRQCSGATIKIAGMQE---GSTDRQV 293
Query: 308 TISGPQRSIRTAESMIMQKVAYA 330
TI+G SI A+ +I + A
Sbjct: 294 TITGTPESISMAQFLINTSLELA 316
>gi|195158519|ref|XP_002020133.1| GL13824 [Drosophila persimilis]
gi|194116902|gb|EDW38945.1| GL13824 [Drosophila persimilis]
Length = 554
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 113/198 (57%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 69 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 128
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 129 EAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 188
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 189 QIKEDSGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 247
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 248 YADVSGPVANFNPTGSPY 265
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 84 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 143
Query: 329 YASD 332
D
Sbjct: 144 EKPD 147
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 273 GRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G GR+++EI +SGA +++S +G F GT R VTI+G +I A+ +I QK+
Sbjct: 482 GPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQKI 536
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 51 GKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K+ E
Sbjct: 482 GPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQKITEE 539
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 149 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDV- 207
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLL 106
+R I I G + A +++ K++
Sbjct: 208 SLQERCITIIGDKENNKNACKMILSKIV 235
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 161 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVS-LQERCITIIGD 219
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 220 KENNKNACKMILSKI 234
>gi|390177062|ref|XP_003736268.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858892|gb|EIM52341.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 714
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 9/199 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 239 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 298
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 299 EAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 358
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 359 QIKEDSGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 417
Query: 206 YTYAGVFFSGFH--GMPYG 222
Y + F+ G PY
Sbjct: 418 YADVSGPVANFNPTGSPYA 436
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 254 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKI 312
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 319 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDV- 377
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 378 SLQERCITIIGDKENNKNACKMILSKIVED 407
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 331 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVS-LQERCITIIGD 389
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 390 KENNKNACKMILSKI 404
>gi|348537887|ref|XP_003456424.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oreochromis
niloticus]
Length = 496
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 125/227 (55%), Gaps = 18/227 (7%)
Query: 12 PDVHGKRSTAPVKSLSSDPT----EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
PD + P ++ S+ T E +++ L+ + AG++IGKGG TI Q ++GA
Sbjct: 30 PDSRKRPLETPTEASSTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGAT 89
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT------- 120
I+LS+S +F+PGTT+R+ +I GT++ + D + +K+ + + + V
Sbjct: 90 IKLSKSKDFYPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTV 149
Query: 121 ----KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
+ +LIVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G
Sbjct: 150 NPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTISG 208
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
++ +A+E+I+ K+ ED S + + Y+ V S G PY
Sbjct: 209 EPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNITGPVANSNPTGSPY 255
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 49/69 (71%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G Q + + A+
Sbjct: 415 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAAQ 474
Query: 321 SMIMQKVAY 329
+I Q++ Y
Sbjct: 475 YLISQRITY 483
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 118
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+ I K+ E +Q T P + P V P
Sbjct: 119 VHDFIAEKVREMPQSTQ-KTEPVSIL---------QPQTTVNP----------------- 151
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 152 ----------DRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 200
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VTISG R A +I+QK+
Sbjct: 201 ERVVTISGEPEQNRKAVEIIVQKI 224
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+ +
Sbjct: 413 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS-QAATQ 471
Query: 97 AVDLVIDKLLT 107
A +I + +T
Sbjct: 472 AAQYLISQRIT 482
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I
Sbjct: 391 ASPLVASSLLATEKLAE------GAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARI 444
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+IS+ G +R VT+TG+ A LI +++
Sbjct: 445 QISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQRIT 482
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 110/183 (60%), Gaps = 12/183 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 79 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 138
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATI 144
D + +K+ + + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 139 NVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATV 198
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 199 KAVMEQSGAWVQLSQKPDG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 257
Query: 205 PYT 207
Y+
Sbjct: 258 SYS 260
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G + + A+
Sbjct: 436 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQAAQ 495
Query: 321 SMIMQKVAY 329
+I Q++ Y
Sbjct: 496 YLISQRITY 504
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 80 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNN 139
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+ I K+ E +Q T P + P V P
Sbjct: 140 VHDFIAEKVREMPQSAQK-TEPVSIL---------QPQTTVNP----------------- 172
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + D +
Sbjct: 173 ----------DRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGIN-LQ 221
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VTISG R A +I+QK+
Sbjct: 222 ERVVTISGEPEQNRKAVEIIVQKI 245
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 434 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQA 493
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 494 AQYLISQRITYE 505
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I
Sbjct: 412 ASPLVASSLLATEKLAE------GAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARI 465
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+IS+ G +R VT+TG+ A LI +++
Sbjct: 466 QISKKGEFVPGTRNRKVTITGSPAATQAAQYLISQRIT 503
>gi|51472291|gb|AAU04539.1| neurological oncogenic ventral antigen protein [Danio rerio]
Length = 473
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 115/199 (57%), Gaps = 14/199 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 64 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 123
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATI 144
D + +K+ + + + V + +L+VPNS+ G IIGK GAT+
Sbjct: 124 NVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLVVPNSTAGLIIGKGGATV 183
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 184 KAVMEQSGAWVQLSQKPDG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 242
Query: 205 PYT--YAGVFFSGFHGMPY 221
Y+ V S G PY
Sbjct: 243 SYSNISGPVANSNPTGSPY 261
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNN 124
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+ I K+ E +Q T P + P V P
Sbjct: 125 VHDFIAEKVREMPQSAQ-KTEPVSIL---------QPQTTVNP----------------- 157
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + D +
Sbjct: 158 ----------DRVKQAKLVVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGIN-LQ 206
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VTISG R A +I+QK+
Sbjct: 207 ERVVTISGEPEQNRKAVEIIVQKI 230
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 38/51 (74%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G
Sbjct: 421 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITG 471
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 419 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGS 472
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I
Sbjct: 397 ASPLVASSLLATEKLAE------GAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARI 450
Query: 156 KISRLDHSYYGLNDRLVTLTGT 177
+IS+ G +R VT+TG+
Sbjct: 451 QISKKGEFVPGTRNRKVTITGS 472
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 162/316 (51%), Gaps = 34/316 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAH-----YGPNMGGRKFQNNKDDRTNS 258
+ V F+G G Y A+P P H A GPN G + + +T+S
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPMGPNNPGFQGGMDASAQTSS 242
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI
Sbjct: 243 HEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANP---VEGSADRQVTITGSAASISL 299
Query: 319 AESMIMQKVAYASDRL 334
AE +I +++ + L
Sbjct: 300 AEYLINARLSSEATGL 315
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+GT I+ V + +L
Sbjct: 148 IAGTPQSIIECVKQICVVML 167
>gi|24645370|ref|NP_731356.1| pasilla, isoform C [Drosophila melanogaster]
gi|11526808|gb|AAG36790.1|AF220423_1 PASILLA splice variant 4 [Drosophila melanogaster]
gi|23170800|gb|AAF54378.2| pasilla, isoform C [Drosophila melanogaster]
Length = 561
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 117/208 (56%), Gaps = 9/208 (4%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P L E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT
Sbjct: 42 PAFQLQQSFCETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTT 101
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGS 135
+R+ +I+G+ + I+ ++ ++DK+ + ++ D +K +++++VPNS+ G
Sbjct: 102 ERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGM 161
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
IIGK GA IK ++S + ++IS+ + L +R +T+ G + A ++IL K+ ED
Sbjct: 162 IIGKGGAFIKQIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVED 220
Query: 196 TLYSQTMTVPYTYAGVFFSGFH--GMPY 221
+ V Y + F+ G PY
Sbjct: 221 PQSGTCLNVSYADVSGPVANFNPTGSPY 248
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 473 DSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 532
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 533 AKAQYLIEQKI 543
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 67 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIR 126
Query: 329 YASD 332
D
Sbjct: 127 EKPD 130
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 483 IIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 542
Query: 105 LLTE 108
+ E
Sbjct: 543 INEE 546
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 144 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGD 202
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 203 KENNKNACKMILSKI 217
>gi|260064185|gb|ACX30053.1| MIP13670p [Drosophila melanogaster]
Length = 346
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 114/194 (58%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+ + I+
Sbjct: 147 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIM 206
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKAGATIKSFMD 149
++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK +
Sbjct: 207 VVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKE 266
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 267 ESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADV 325
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 326 SGPVANFNPTGSPY 339
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 158 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKI 216
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +R I I G
Sbjct: 236 ERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQERCITIIGDK 294
Query: 92 DEILRAVDLVIDKLL 106
+ A +++ K++
Sbjct: 295 ENNKNACKMILSKIV 309
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G +
Sbjct: 236 ERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGDK 294
Query: 314 RSIRTAESMIMQKV 327
+ + A MI+ K+
Sbjct: 295 ENNKNACKMILSKI 308
>gi|161078112|ref|NP_001036692.1| pasilla, isoform F [Drosophila melanogaster]
gi|164449760|ref|NP_731351.3| pasilla, isoform H [Drosophila melanogaster]
gi|164449762|ref|NP_731352.3| pasilla, isoform G [Drosophila melanogaster]
gi|320542556|ref|NP_001189199.1| pasilla, isoform N [Drosophila melanogaster]
gi|320542564|ref|NP_001189203.1| pasilla, isoform O [Drosophila melanogaster]
gi|11526806|gb|AAG36789.1|AF220422_1 PASILLA splice variant 3 [Drosophila melanogaster]
gi|158030195|gb|AAF54377.3| pasilla, isoform F [Drosophila melanogaster]
gi|158030196|gb|AAN13425.2| pasilla, isoform G [Drosophila melanogaster]
gi|158030197|gb|AAN13424.2| pasilla, isoform H [Drosophila melanogaster]
gi|318068743|gb|ADV37290.1| pasilla, isoform N [Drosophila melanogaster]
gi|318068747|gb|ADV37294.1| pasilla, isoform O [Drosophila melanogaster]
Length = 572
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 123 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 182
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 183 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 241
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 242 YADVSGPVANFNPTGSPY 259
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 484 DSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 543
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 544 AKAQYLIEQKI 554
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIR 137
Query: 329 YASD 332
D
Sbjct: 138 EKPD 141
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 494 IIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 553
Query: 105 LLTE 108
+ E
Sbjct: 554 INEE 557
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G +
Sbjct: 156 ERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGDK 214
Query: 314 RSIRTAESMIMQKV 327
+ + A MI+ K+
Sbjct: 215 ENNKNACKMILSKI 228
>gi|25012554|gb|AAN71378.1| RE36563p, partial [Drosophila melanogaster]
Length = 605
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 117/208 (56%), Gaps = 9/208 (4%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P L E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT
Sbjct: 86 PAFQLQQSFCETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTT 145
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGS 135
+R+ +I+G+ + I+ ++ ++DK+ + ++ D +K +++++VPNS+ G
Sbjct: 146 ERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGM 205
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
IIGK GA IK ++S + ++IS+ + L +R +T+ G + A ++IL K+ ED
Sbjct: 206 IIGKGGAFIKQIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVED 264
Query: 196 TLYSQTMTVPYTYAGVFFSGFH--GMPY 221
+ V Y + F+ G PY
Sbjct: 265 PQSGTCLNVSYADVSGPVANFNPTGSPY 292
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 517 DSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 576
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 577 AKAQYLIEQKI 587
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 247 KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERK 306
+ Q + + T + I V G ++G+GG I + + +GAR+K+S DF+ GT+ER
Sbjct: 89 QLQQSFCETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERV 148
Query: 307 VTISGPQRSIRTAESMIMQKVAYASD 332
I+G +I IM K+ D
Sbjct: 149 CLITGSTEAIMVVMEFIMDKIREKPD 174
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 527 IIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 586
Query: 105 LLTE 108
+ E
Sbjct: 587 INEE 590
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 188 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGD 246
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 247 KENNKNACKMILSKI 261
>gi|195445981|ref|XP_002070572.1| GK10958 [Drosophila willistoni]
gi|194166657|gb|EDW81558.1| GK10958 [Drosophila willistoni]
Length = 578
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 112/194 (57%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+ + I+
Sbjct: 67 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEGIM 126
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK +
Sbjct: 127 TVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKE 186
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 187 ESGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADV 245
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 246 SGPVANFNPTGSPY 259
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG V+G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 490 DSKCVEVPEVIIGAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGHPSAI 549
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 550 AKAQCLIEQKI 560
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
D T + I V G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G
Sbjct: 63 DSTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 314 RSIRTAESMIMQKVAYASD 332
I T IM K+ D
Sbjct: 123 EGIMTVLDFIMDKIREKPD 141
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GAV+G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 500 IIGAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGHPSAIAKAQCLIEQK 559
Query: 105 LLTE 108
+ E
Sbjct: 560 INEE 563
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV- 201
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLL 106
+R I I G + A +++ K++
Sbjct: 202 SLQERCITIIGDKENNKNACKMILSKIV 229
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G +
Sbjct: 156 ERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS-LQERCITIIGDK 214
Query: 314 RSIRTAESMIMQKV 327
+ + A MI+ K+
Sbjct: 215 ENNKNACKMILSKI 228
>gi|307213191|gb|EFN88688.1| RNA-binding protein Nova-1 [Harpegnathos saltator]
Length = 514
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 111/179 (62%), Gaps = 9/179 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEAIM 105
Query: 96 RAVDLVIDKLLT--ELHAEDQAD-DVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSF 147
+D +++K+ +L ++ D D G T +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMEKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S + ++IS+ L +R +T+ G + AL +IL K+++D + V Y
Sbjct: 166 KEESGSYVQISQKAKD-LSLQERCITVIGEKENNRNALLMILAKVADDPQSGTCLNVSY 223
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 41/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +K+S+ Y G +R+ +TG+++ M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEAIMA 106
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ I+ K+ E + TV F SG TA
Sbjct: 107 VMDFIMEKIREKPDLTSKTTVD------FDSG-----------------KATA------- 136
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+ G I +I + SG+ +++S + S
Sbjct: 137 ----------ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLS-LQ 185
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G + + R A MI+ KVA
Sbjct: 186 ERCITVIGEKENNRNALLMILAKVA 210
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
T + I +A+ +G ++G GGR ++EI +SGA I++S +G F GT R VTI+G
Sbjct: 424 ETKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPN 483
Query: 315 SIRTAESMIMQKVA 328
+I TA+ +I Q+++
Sbjct: 484 AINTAQYLIEQRIS 497
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
+HYG GG D T L + V G ++G+GG I ++ + +GAR+K+S
Sbjct: 35 SHYGS--GG--------DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSH 84
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
DF+ GT+ER I+G +I IM+K+
Sbjct: 85 DFYPGTTERVCLITGSVEAIMAVMDFIMEKI 115
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 432 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAINTA-QY 490
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 491 LIEQRISEEEAK 502
>gi|194903195|ref|XP_001980824.1| GG16798 [Drosophila erecta]
gi|190652527|gb|EDV49782.1| GG16798 [Drosophila erecta]
Length = 572
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 114/198 (57%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 123 EAIMVVLEFIMDKIREKPDLTNKIVDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 182
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 183 QIKEESGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 241
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 242 YADVSGPVANFNPTGSPY 259
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 43/204 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++++VP + G+IIGK G TI S D+ A +K+S+ Y G +R+ +TG+ + M
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 127
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
LE I+ K+ E + + V A T
Sbjct: 128 VLEFIMDKIREKPDLTNKI-------------------------VDAESKQT-------- 154
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+GG I +I + SG+ +++S + S
Sbjct: 155 ---------QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS-LQ 204
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +TI G + + + A MI+ K+
Sbjct: 205 ERCITIIGDKENNKNACKMILSKI 228
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 484 DSKNVEVPEVIIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 543
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 544 AKAQYLIEQKI 554
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLEFIMDKIR 137
Query: 329 YASD 332
D
Sbjct: 138 EKPD 141
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 494 IIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 553
Query: 105 LLTE 108
+ E
Sbjct: 554 INEE 557
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ + +
Sbjct: 147 VDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV-SLQE 205
Query: 83 RIIMISGTIDEILRAVDLVIDKLL 106
R I I G + A +++ K++
Sbjct: 206 RCITIIGDKENNKNACKMILSKIV 229
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 115/199 (57%), Gaps = 14/199 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 66 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 125
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATI 144
+ + +K+ + + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 126 SVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATV 185
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 186 KAVMEQSGAWVQLSQKPEG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 244
Query: 205 PYTYAG--VFFSGFHGMPY 221
Y+ V S G PY
Sbjct: 245 SYSNVSGPVANSNPTGSPY 263
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 51/77 (66%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G
Sbjct: 414 DGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS 473
Query: 313 QRSIRTAESMIMQKVAY 329
+ + A+ +I Q++ Y
Sbjct: 474 PAATQAAQYLISQRITY 490
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 67 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNS 126
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-PVPAVPHNTAAHYGPN 242
I K+ E MP A P PV + T +
Sbjct: 127 VHNFIAEKVRE------------------------MPQSAQKPEPVSILQPQTTVN---- 158
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 159 ----------PDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-L 207
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VTISG R A +I+QK+
Sbjct: 208 QERVVTISGEPEQNRKAVEIIVQKI 232
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 420 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 479
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 480 AQYLISQRITYE 491
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%)
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
G K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+ GT+
Sbjct: 52 GCTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 111
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER I G ++ + + I +KV
Sbjct: 112 ERVCLIQGTVEALNSVHNFIAEKV 135
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 100 LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
L+ LL D A DV + + VP + G+I+GK G T+ + + + A I+IS+
Sbjct: 401 LMASSLLATEKLADGAKDV-----VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 455
Query: 160 LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G +R VT+TG+ A LI +++
Sbjct: 456 KGEFIPGTRNRKVTITGSPAATQAAQYLISQRIT 489
>gi|442618212|ref|NP_001262414.1| pasilla, isoform Q [Drosophila melanogaster]
gi|440217246|gb|AGB95796.1| pasilla, isoform Q [Drosophila melanogaster]
Length = 517
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 116/199 (58%), Gaps = 9/199 (4%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 7 SETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 66
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATI 144
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA I
Sbjct: 67 TEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFI 126
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K ++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 127 KQIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNV 185
Query: 205 PYTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 186 SYADVSGPVANFNPTGSPY 204
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 429 DSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 488
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 489 AKAQYLIEQKI 499
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 23 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIR 82
Query: 329 YASD 332
D
Sbjct: 83 EKPD 86
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 439 IIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 498
Query: 105 LLTE 108
+ E
Sbjct: 499 INEE 502
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +R I
Sbjct: 96 SKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQERCIT 154
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I G + A +++ K++
Sbjct: 155 IIGDKENNKNACKMILSKIV 174
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 100 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGD 158
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 159 KENNKNACKMILSKI 173
>gi|194741910|ref|XP_001953430.1| GF17214 [Drosophila ananassae]
gi|190626489|gb|EDV42013.1| GF17214 [Drosophila ananassae]
Length = 532
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 113/198 (57%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 123 EAIMFVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 182
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 183 QIKEESGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 241
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 242 YADVSGPVANFNPTGSPY 259
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMFVLDFIMDKIR 137
Query: 329 YASD 332
D
Sbjct: 138 EKPD 141
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV- 201
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLL 106
+R I I G + A +++ K++
Sbjct: 202 SLQERCITIIGDKENNKNACKMILSKIV 229
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G +
Sbjct: 156 ERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS-LQERCITIIGDK 214
Query: 314 RSIRTAESMIMQKV 327
+ + A MI+ K+
Sbjct: 215 ENNKNACKMILSKI 228
>gi|442618214|ref|NP_001262415.1| pasilla, isoform R [Drosophila melanogaster]
gi|440217247|gb|AGB95797.1| pasilla, isoform R [Drosophila melanogaster]
Length = 780
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 271 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 330
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 331 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 390
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 391 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 449
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 450 YADVSGPVANFNPTGSPY 467
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 692 DSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 751
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 752 AKAQYLIEQKI 762
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 286 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKI 344
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 702 IIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 761
Query: 105 LLTE 108
+ E
Sbjct: 762 INEE 765
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +R I
Sbjct: 359 SKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQERCIT 417
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I G + A +++ K++
Sbjct: 418 IIGDKENNKNACKMILSKIV 437
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 363 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGD 421
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 422 KENNKNACKMILSKI 436
>gi|432895615|ref|XP_004076076.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oryzias
latipes]
Length = 444
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 115/199 (57%), Gaps = 14/199 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 7 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 66
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATI 144
+ + +K+ + + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 67 SVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATV 126
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 127 KAVMEQSGAWVQLSQKPEG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 185
Query: 205 PYTYAG--VFFSGFHGMPY 221
Y+ V S G PY
Sbjct: 186 SYSNVSGPVANSNPTGSPY 204
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 51/77 (66%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G
Sbjct: 355 DGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS 414
Query: 313 QRSIRTAESMIMQKVAY 329
+ + A+ +I Q++ Y
Sbjct: 415 PAATQAAQYLISQRITY 431
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNS 67
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-PVPAVPHNTAAHYGPN 242
I K+ E MP A P PV + T +
Sbjct: 68 VHNFIAEKVRE------------------------MPQSAQKPEPVSILQPQTTVN---- 99
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 100 ----------PDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-L 148
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VTISG R A +I+QK+
Sbjct: 149 QERVVTISGEPEQNRKAVEIIVQKI 173
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 361 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 420
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 421 AQYLISQRITYE 432
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E AD G K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 348 LATEKLAD--GAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTR 405
Query: 169 DRLVTLTGTLDEQMRALELI 188
+R VT+TG+ A LI
Sbjct: 406 NRKVTITGSPAATQAAQYLI 425
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 163/344 (47%), Gaps = 56/344 (16%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
+K +++D IR ++ G++IGKGG TI F+ QSGARI +S S +
Sbjct: 7 IKKMANDGPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDS-----SCAE 61
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSI 136
RI+ ++G+ + I A +++ K ED ++++ + LRL+VP S CGS+
Sbjct: 62 RIVTVTGSTEAINNAFEMITKKF-----EEDVSNNMANSSTPKPPVTLRLVVPASQCGSL 116
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK G+ IK +++ A ++++ + +R VT++GT + + + I + E
Sbjct: 117 IGKGGSKIKEIRENTGASVQVA--GDMLHQSTERAVTISGTPEAITKCVYQICCVMLESP 174
Query: 197 LYSQTMTVPY---------TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAH--------- 238
+ T+PY T+ G + +PY P + H T H
Sbjct: 175 --PKGATIPYRPKPTNATATHPAYAVHGNYAVPY----PDFMKLHHLTMQHTPFLPGQTP 228
Query: 239 YGP---NMGGRKFQNNKDDRTNSLTIG-------VADEHIGFVVGRGGRNIMEISQISGA 288
+ P NM G N T T G + ++ IG V+GRGG I EI QISGA
Sbjct: 229 FTPTALNM-GYGVANAASAGTQVATTGQQTYEIMIPNDLIGCVIGRGGAKINEIRQISGA 287
Query: 289 RIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASD 332
IK+++ + G+++R VTISG +I A +I + A +
Sbjct: 288 TIKIANSQE---GSNDRSVTISGTVEAINLAHFLINSSLELAKN 328
>gi|161078120|ref|NP_001036697.1| pasilla, isoform J [Drosophila melanogaster]
gi|19527741|gb|AAL89985.1| AT03366p [Drosophila melanogaster]
gi|113194765|gb|ABI31154.1| pasilla, isoform J [Drosophila melanogaster]
Length = 539
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 30 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 89
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 90 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 149
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 150 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 208
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 209 YADVSGPVANFNPTGSPY 226
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 451 DSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 510
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 511 AKAQYLIEQKI 521
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 45 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIR 104
Query: 329 YASD 332
D
Sbjct: 105 EKPD 108
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 461 IIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 520
Query: 105 LLTE 108
+ E
Sbjct: 521 INEE 524
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +R I
Sbjct: 118 SKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQERCIT 176
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I G + A +++ K++
Sbjct: 177 IIGDKENNKNACKMILSKIV 196
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 122 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGD 180
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 181 KENNKNACKMILSKI 195
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 125/227 (55%), Gaps = 18/227 (7%)
Query: 12 PDVHGKRSTAPVKSLSSDPT----EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
PD + P ++ S+ T E +++ L+ + AG++IGKGG TI Q ++GA
Sbjct: 30 PDSRKRPLETPTEASSTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGAT 89
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT------- 120
I+LS+S +F+PGTT+R+ +I GT++ + + + +K+ + + + V
Sbjct: 90 IKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSTQKTEPVSILQPQTTV 149
Query: 121 ----KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
+ +LIVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G
Sbjct: 150 NPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTISG 208
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
++ +A+E+I+ K+ ED S + + Y+ V S G PY
Sbjct: 209 EPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNITGPVANSNPTGSPY 255
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 49/69 (71%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G Q + + A+
Sbjct: 415 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAAQ 474
Query: 321 SMIMQKVAY 329
+I Q++ Y
Sbjct: 475 YLISQRITY 483
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 118
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E +Q T P + P V P
Sbjct: 119 VHNFIAEKVREMPQSTQK-TEPVSIL---------QPQTTVNP----------------- 151
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 152 ----------DRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 200
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VTISG R A +I+QK+
Sbjct: 201 ERVVTISGEPEQNRKAVEIIVQKI 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+ +
Sbjct: 413 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS-QAATQ 471
Query: 97 AVDLVIDKLLT 107
A +I + +T
Sbjct: 472 AAQYLISQRIT 482
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I
Sbjct: 391 ASPLVASSLLATEKLAE------GAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARI 444
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+IS+ G +R VT+TG+ A LI +++
Sbjct: 445 QISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQRIT 482
>gi|320542558|ref|NP_001189200.1| pasilla, isoform L [Drosophila melanogaster]
gi|318068744|gb|ADV37291.1| pasilla, isoform L [Drosophila melanogaster]
Length = 758
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 249 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 308
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 309 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 368
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 369 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 427
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 428 YADVSGPVANFNPTGSPY 445
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 670 DSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 729
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 730 AKAQYLIEQKI 740
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 264 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKI 322
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 680 IIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 739
Query: 105 LLTE 108
+ E
Sbjct: 740 INEE 743
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +R I
Sbjct: 337 SKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQERCIT 395
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I G + A +++ K++
Sbjct: 396 IIGDKENNKNACKMILSKIV 415
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 341 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGD 399
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 400 KENNKNACKMILSKI 414
>gi|24645368|ref|NP_731355.1| pasilla, isoform D [Drosophila melanogaster]
gi|23170799|gb|AAN13428.1| pasilla, isoform D [Drosophila melanogaster]
Length = 583
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 74 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 133
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 134 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 193
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 194 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 252
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 253 YADVSGPVANFNPTGSPY 270
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + V + IG ++G GR+++EI +SGA +++S +G F GT R VTI+G +I
Sbjct: 495 DSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAI 554
Query: 317 RTAESMIMQKV 327
A+ +I QK+
Sbjct: 555 AKAQYLIEQKI 565
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 89 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIR 148
Query: 329 YASD 332
D
Sbjct: 149 EKPD 152
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K
Sbjct: 505 IIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQK 564
Query: 105 LLTE 108
+ E
Sbjct: 565 INEE 568
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +R I
Sbjct: 162 SKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQERCIT 220
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I G + A +++ K++
Sbjct: 221 IIGDKENNKNACKMILSKIV 240
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 166 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGD 224
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 225 KENNKNACKMILSKI 239
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 110/183 (60%), Gaps = 12/183 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 58 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 117
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-----------KLRLIVPNSSCGSIIGKAGATI 144
+ + +K+ + + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 118 GVHNFIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIKQAKLIVPNSTAGLIIGKGGATV 177
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 178 KAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 236
Query: 205 PYT 207
Y+
Sbjct: 237 SYS 239
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G + + A+
Sbjct: 414 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQ 473
Query: 321 SMIMQKVAY 329
+I Q++ Y
Sbjct: 474 YLISQRITY 482
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 118
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E SQ T P + P V P
Sbjct: 119 VHNFIAEKVREMPQSSQK-TEPVSIL---------QPQTTVNP----------------- 151
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 152 ----------DRIKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 200
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 201 ERVVTVSGEPEQNRKAVEIIVQKI 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 412 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 471
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 472 AQYLISQRITYE 483
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 100 LVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I+IS
Sbjct: 393 LVASSLLGTEKLAE------GGKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 446
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
+ G +R VT+TG+ A LI
Sbjct: 447 KKGEFIPGTRNRKVTITGSPAATQAAQYLI 476
>gi|24645366|ref|NP_731354.1| pasilla, isoform B [Drosophila melanogaster]
gi|11526802|gb|AAG36787.1|AF220420_1 PASILLA splice variant 1 [Drosophila melanogaster]
gi|11526804|gb|AAG36788.1|AF220421_1 PASILLA splice variant 2 [Drosophila melanogaster]
gi|23170798|gb|AAN13427.1| pasilla, isoform B [Drosophila melanogaster]
Length = 475
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 30 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 89
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 90 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 149
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 150 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 208
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 209 YADVSGPVANFNPTGSPY 226
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 45 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKI 103
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +R I
Sbjct: 118 SKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQERCIT 176
Query: 87 ISGTIDEILRAVDLVIDKLLTE 108
I G + A +++ K++ +
Sbjct: 177 IIGDKENNKNACKMILSKIVED 198
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G +
Sbjct: 123 ERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGDK 181
Query: 314 RSIRTAESMIMQKV 327
+ + A MI+ K+
Sbjct: 182 ENNKNACKMILSKI 195
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 115/199 (57%), Gaps = 14/199 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 66 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 125
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATI 144
+ + +K+ + + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 126 GVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATV 185
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 186 KAVMEQSGAWVQLSQKPEG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 244
Query: 205 PYTYAG--VFFSGFHGMPY 221
Y+ V S G PY
Sbjct: 245 SYSNVSGPVANSNPTGSPY 263
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 51/77 (66%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G
Sbjct: 414 DGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS 473
Query: 313 QRSIRTAESMIMQKVAY 329
+ + A+ +I Q++ Y
Sbjct: 474 PAATQAAQYLISQRITY 490
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 67 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 126
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-PVPAVPHNTAAHYGPN 242
I K+ E MP A P PV + T +
Sbjct: 127 VHNFIAEKVRE------------------------MPQSAQKPEPVSILQPQTTVN---- 158
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 159 ----------PDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-L 207
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VTISG R A +I+QK+
Sbjct: 208 QERVVTISGEPEQNRKAVEIIVQKI 232
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 420 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 479
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 480 AQYLISQRITYE 491
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
G K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+ GT+
Sbjct: 52 GCTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 111
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER I G ++ + I +KV
Sbjct: 112 ERVCLIQGTVEALNGVHNFIAEKV 135
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E AD G K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 407 LATEKLAD--GAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTR 464
Query: 169 DRLVTLTGTLDEQMRALELI 188
+R VT+TG+ A LI
Sbjct: 465 NRKVTITGSPAATQAAQYLI 484
>gi|161078118|ref|NP_001036691.1| pasilla, isoform I [Drosophila melanogaster]
gi|113194762|gb|ABI31151.1| pasilla, isoform I [Drosophila melanogaster]
Length = 519
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 74 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 133
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 134 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 193
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 194 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 252
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 253 YADVSGPVANFNPTGSPY 270
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I + + +GAR+K+S DF+ GT+ER I+G +I IM K+
Sbjct: 89 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKI 147
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+R + I V + G ++G+GG I +I + SG+ +++S + S ER +TI G
Sbjct: 166 QERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQERCITIIGD 224
Query: 313 QRSIRTAESMIMQKV 327
+ + + A MI+ K+
Sbjct: 225 KENNKNACKMILSKI 239
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 159/311 (51%), Gaps = 33/311 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRKFQNNKDDRTNS 258
+ + V F+G G Y A+P P H A +H+ G F + D T +
Sbjct: 187 SSSPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSASLDASTQT 244
Query: 259 L-TIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + IG ++GR G NI EI Q+SGA+IK+++ G+S R+VTI+G SI
Sbjct: 245 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP---VEGSSGRQVTITGSAASIS 301
Query: 318 TAESMIMQKVA 328
A+ +I +++
Sbjct: 302 LAQYLINARLS 312
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETL 170
>gi|51092069|gb|AAT94448.1| RE39088p [Drosophila melanogaster]
Length = 563
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 118 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 177
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 178 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 237
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 238 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 296
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 297 YADVSGPVANFNPTGSPY 314
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 49/211 (23%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
T ++++VP + G+IIGK G TI S D+ A +K+S+ Y G +R+ +TG+ +
Sbjct: 119 TTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTE 178
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
M +E I+ K+ E
Sbjct: 179 AIMVVMEFIMDKIREK-------------------------------------------- 194
Query: 240 GPNMGGRKFQNNK---DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
P++ + + +R + I V + G ++G+GG I +I + SG+ +++S +
Sbjct: 195 -PDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKP 253
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
S ER +TI G + + + A MI+ K+
Sbjct: 254 TDVS-LQERCITIIGDKENNKNACKMILSKI 283
>gi|269784927|ref|NP_001161615.1| NOVA-like protein [Saccoglossus kowalevskii]
gi|268054231|gb|ACY92602.1| NOVA-like protein [Saccoglossus kowalevskii]
Length = 516
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 109/175 (62%), Gaps = 6/175 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ + AG+VIGKGG T+ Q ++GA I+LS+S++++PGT++R+++I+GT++ +
Sbjct: 48 LKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYYPGTSERVVLITGTVESLTA 107
Query: 97 AVDLVIDKL-----LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
+ VI+K+ L + A ++++I+PNS+ G IIGK GATIK+FM+ +
Sbjct: 108 VGNFVIEKVRDSPQLAAKTGNESAVSQERARQVKIIIPNSTAGLIIGKGGATIKAFMEQT 167
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+ ++IS+ L++R++T++G D +A+ ++ K+ ED + Y
Sbjct: 168 GSKLQISQKSEGVN-LSERVLTISGEGDANKKAMNAVISKVQEDPQSGSCNNISY 221
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 49/73 (67%)
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
+ ++L I V + +G ++G+GG+ ++E Q SGARI++S +G++ GT RKV I+G
Sbjct: 431 KDSTLEIEVPETLVGAILGKGGKTLVEFQQCSGARIQISKKGEYVPGTRNRKVIITGNNL 490
Query: 315 SIRTAESMIMQKV 327
+ +TA ++ Q++
Sbjct: 491 ATQTAHYLVTQRI 503
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 93/204 (45%), Gaps = 44/204 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+++ GS+IGK G T+ ++ A IK+S+ + Y G ++R+V +TGT++
Sbjct: 48 LKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYYPGTSERVVLITGTVESLTA 107
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ K+ + P + A N +A
Sbjct: 108 VGNFVIEKVRDS------------------------------PQLAAKTGNESAV----- 132
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I + + G ++G+GG I + +G+++++S + + + S
Sbjct: 133 --------SQERARQVKIIIPNSTAGLIIGKGGATIKAFMEQTGSKLQISQKSEGVN-LS 183
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +TISG + + A + ++ KV
Sbjct: 184 ERVLTISGEGDANKKAMNAVISKV 207
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
LS D K + + V L GA++GKGG T+ +FQ SGARIQ+S+ E+ PGT +R +
Sbjct: 425 LSKD-AAKDSTLEIEVPETLVGAILGKGGKTLVEFQQCSGARIQISKKGEYVPGTRNRKV 483
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
+I+G A LV ++ E
Sbjct: 484 IITGNNLATQTAHYLVTQRITQE 506
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ ++ N AG +IGKGG+TI F Q+G+++Q+S+ E ++R++ ISG
Sbjct: 135 ERARQVKIIIPNSTAGLIIGKGGATIKAFMEQTGSKLQISQKSEGV-NLSERVLTISGEG 193
Query: 92 DEILRAVDLVIDKL 105
D +A++ VI K+
Sbjct: 194 DANKKAMNAVISKV 207
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
N+GG DD L + + G V+G+GG+ ++++ + +GA IK+S D++ G
Sbjct: 37 NIGGN------DDNKYILKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYYPG 90
Query: 302 TSERKVTISGPQRSIRTAESMIMQKV 327
TSER V I+G S+ + +++KV
Sbjct: 91 TSERVVLITGTVESLTAVGNFVIEKV 116
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 21/96 (21%)
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
TEL ++D A D + L + VP + G+I+GK G T+ F S A I+IS+ G
Sbjct: 423 TEL-SKDAAKD----STLEIEVPETLVGAILGKGGKTLVEFQQCSGARIQISKKGEYVPG 477
Query: 167 LNDRLVTLTG----------------TLDEQMRALE 186
+R V +TG T +EQ RAL+
Sbjct: 478 TRNRKVIITGNNLATQTAHYLVTQRITQEEQNRALK 513
>gi|224097724|ref|XP_002311055.1| predicted protein [Populus trichocarpa]
gi|222850875|gb|EEE88422.1| predicted protein [Populus trichocarpa]
Length = 99
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 70/85 (82%)
Query: 252 KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
++DRTNS+TIGVADE+IG VVGRGGRNIMEI Q SGARIK+SDRG F SGT+E K+TI+G
Sbjct: 14 QEDRTNSVTIGVADEYIGLVVGRGGRNIMEIIQNSGARIKISDRGGFMSGTNEGKITITG 73
Query: 312 PQRSIRTAESMIMQKVAYASDRLMD 336
QR+I AE MIM+KV+Y R D
Sbjct: 74 SQRAIHAAEDMIMRKVSYICFREGD 98
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V++ G V+G+GG I + SGARI++S F GT + I I+G+ I A D+
Sbjct: 25 VADEYIGLVVGRGGRNIMEIIQNSGARIKISDRGGFMSGTNEGKITITGSQRAIHAAEDM 84
Query: 101 VIDKL 105
++ K+
Sbjct: 85 IMRKV 89
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 160/319 (50%), Gaps = 40/319 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTSIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ +K +RL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRESAGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP------NMGGRKFQNNKD--DR 255
+ V F+G G Y A+P P H A P N G FQ D +
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAHSNQG---FQAGMDASAQ 239
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
T S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G S
Sbjct: 240 TGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSHAS 296
Query: 316 IRTAESMIMQKVAYASDRL 334
I AE +I +++ + L
Sbjct: 297 ISLAEYLINARLSSEATGL 315
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P IR +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+GT I+ V + +L
Sbjct: 148 IAGTPQSIIECVKQICVVML 167
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 163/325 (50%), Gaps = 43/325 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPP----VPAVPHNTAAH----------YGPNMGGRKFQ 249
+ V F+G G Y A+P P P T H GPN G +
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDSSSASISPQLTKLHQLAMQQSPFPMGPNNPGFQGG 242
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
+ +T+S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI
Sbjct: 243 MDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANP---VEGSADRQVTI 299
Query: 310 SGPQRSIRTAESMIMQKVAYASDRL 334
+G SI AE +I +++ + L
Sbjct: 300 TGSAASISLAEYLINARLSSEATGL 324
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+GT I+ V + +L
Sbjct: 148 IAGTPQSIIECVKQICVVML 167
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 160/319 (50%), Gaps = 40/319 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTSIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ +K +RL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITVAGTPQSIIECVKQICIVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP------NMGGRKFQNNKD--DR 255
+ V F+G G Y A+P P H A P N G FQ D +
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAHSNQG---FQAGMDASAQ 239
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
T S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G S
Sbjct: 240 TGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSHAS 296
Query: 316 IRTAESMIMQKVAYASDRL 334
I AE +I +++ + L
Sbjct: 297 ISLAEYLINARLSSEATGL 315
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
++GT I+ V + +L
Sbjct: 148 VAGTPQSIIECVKQICIVML 167
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 115/199 (57%), Gaps = 14/199 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 64 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 123
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATI 144
+ + +K+ + + + V + ++IVPNS+ G IIGK GAT+
Sbjct: 124 GVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKIIVPNSTAGLIIGKGGATV 183
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 184 KAVMEQSGAWVQLSQKPEG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 242
Query: 205 PYTYAG--VFFSGFHGMPY 221
Y+ V S G PY
Sbjct: 243 SYSNVSGPVANSNPTGSPY 261
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 124
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-PVPAVPHNTAAHYGPN 242
I K+ E MP A P PV + T +
Sbjct: 125 VHNFIAEKVRE------------------------MPQSAQKPEPVSILQPQTTVN---- 156
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR I V + G ++G+GG + + + SGA +++S + + +
Sbjct: 157 ----------PDRVKQAKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-L 205
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VTISG R A +I+QK+
Sbjct: 206 QERVVTISGEPEQNRKAVEIIVQKI 230
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 51/77 (66%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G
Sbjct: 412 DGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS 471
Query: 313 QRSIRTAESMIMQKVAY 329
+ + A+ +I Q++ Y
Sbjct: 472 PAATQAAQYLISQRITY 488
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 418 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 477
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 478 AQYLISQRITYE 489
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
G K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+ GT+
Sbjct: 50 GCTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 109
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER I G ++ + I +KV
Sbjct: 110 ERVCLIQGTVEALNGVHNFIAEKV 133
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E AD G K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 405 LATEKLAD--GAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTR 462
Query: 169 DRLVTLTGTLDEQMRALELI 188
+R VT+TG+ A LI
Sbjct: 463 NRKVTITGSPAATQAAQYLI 482
>gi|432101641|gb|ELK29690.1| RNA-binding protein Nova-2 [Myotis davidii]
Length = 294
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 72/282 (25%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 42 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 100
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 101 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 160
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A
Sbjct: 161 VKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA------------------- 200
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
V A+ AA + + I V
Sbjct: 201 ------------------------VSAIVQKLAAESAKEL---------------VEIAV 221
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+ +G ++G+GG+ ++E +++GARI++S +G+F GT R
Sbjct: 222 PENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 263
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 38/210 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 43 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 102
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P + P
Sbjct: 103 VHSFIAEKVRE---IPQAMTKPEVVNIL-------QPQTTMNP----------------- 135
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 136 ----------DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 184
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASDR 333
ER VT+SG + A S I+QK+A S +
Sbjct: 185 ERVVTVSGEPEQVHKAVSAIVQKLAAESAK 214
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P+ K +A V+ L+++ ++ + V L GA++GKGG T+ ++Q +GARIQ+S
Sbjct: 194 PEQVHKAVSAIVQKLAAESAKE--LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 251
Query: 72 RSHEFFPGTTDR 83
+ EF PGT +R
Sbjct: 252 KKGEFLPGTRNR 263
>gi|383863653|ref|XP_003707294.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Megachile
rotundata]
Length = 514
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 104/168 (61%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GA++++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIM 105
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + +E +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++S + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 166 KEESGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +KIS+ Y G +R+ +TG+L+ M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIMA 106
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ I+ K+ E + TV SG TA
Sbjct: 107 VMDFIMDKIREKPDLTLKTTVDSE------SG-----------------KTTA------- 136
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+ G I +I + SG+ +++S + S
Sbjct: 137 ----------ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVS-LQ 185
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G + + R A MI+ KVA
Sbjct: 186 ERCITVIGEKENNRNALMMILAKVA 210
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
NNK+ T + I +A+ +G ++G GGR ++EI +SGA I++S +G F GT R VTI
Sbjct: 421 NNKE--TKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 478
Query: 310 SGPQRSIRTAESMIMQKVA 328
+G +I TA+ +I Q+++
Sbjct: 479 TGYPNAINTAQYLIEQRIS 497
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
+HYG GG D T L + V G ++G+GG I ++ + +GA++K+S
Sbjct: 35 SHYGS--GG--------DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSH 84
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
DF+ GT+ER I+G +I IM K+
Sbjct: 85 DFYPGTTERVCLITGSLEAIMAVMDFIMDKI 115
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 432 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAINTA-QY 490
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 491 LIEQRISEEEAK 502
>gi|383863655|ref|XP_003707295.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Megachile
rotundata]
Length = 535
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 104/168 (61%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GA++++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 67 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIM 126
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + +E +++++VPNS+ G IIGKAG IK
Sbjct: 127 AVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 186
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++S + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 187 KEESGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 233
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +KIS+ Y G +R+ +TG+L+ M
Sbjct: 68 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIMA 127
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ I+ K+ E P + V + T A
Sbjct: 128 VMDFIMDKIREK------------------------PDLTLKTTVDSESGKTTA------ 157
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+ G I +I + SG+ +++S + S
Sbjct: 158 ----------ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVS-LQ 206
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G + + R A MI+ KVA
Sbjct: 207 ERCITVIGEKENNRNALMMILAKVA 231
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
NNK+ T + I +A+ +G ++G GGR ++EI +SGA I++S +G F GT R VTI
Sbjct: 442 NNKE--TKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 499
Query: 310 SGPQRSIRTAESMIMQKVA 328
+G +I TA+ +I Q+++
Sbjct: 500 TGYPNAINTAQYLIEQRIS 518
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
D T L + V G ++G+GG I ++ + +GA++K+S DF+ GT+ER I+G
Sbjct: 63 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSL 122
Query: 314 RSIRTAESMIMQKV 327
+I IM K+
Sbjct: 123 EAIMAVMDFIMDKI 136
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 453 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAINTA-QY 511
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 512 LIEQRISEEEAK 523
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 161/317 (50%), Gaps = 36/317 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLEQS-PPKGVTIPYRPKPSG 185
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP------NMGGRKFQNNKDDRTN 257
+ V F+G G Y A+P P H A P N G + ++
Sbjct: 186 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPNNQGFTGMDASAQTSSH 243
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+TI ++ IG ++GR G I EI Q+SGA+IK+++ D G+++R+VTI+G SI
Sbjct: 244 EMTI--PNDLIGCIIGRQGSKINEIRQMSGAQIKIANPVD---GSADRQVTITGSPASIS 298
Query: 318 TAESMIMQKVAYASDRL 334
AE +I +++ + L
Sbjct: 299 LAEYLINARLSSEATGL 315
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTE 108
I+GT I+ V + +L +
Sbjct: 148 IAGTPQSIIECVKQICVVMLEQ 169
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 129/226 (57%), Gaps = 12/226 (5%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + ++ L+ + AG++IGKGG TI Q ++GA I+LS+S++F+PGTT+RI++I+G
Sbjct: 61 PEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITG 120
Query: 90 TIDEILRAVDLVIDKL------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGAT 143
+ D + +++K+ + +E A++ K +++++VPNS+ G IIGK GAT
Sbjct: 121 SEDSLKSVHKFLMEKIGQAPRPPAKSPSEQNANNNRAK-QVKIVVPNSTAGLIIGKGGAT 179
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
IK M+ + + ++IS+ S L +R++T+TG ++ +A I+ K+ ED
Sbjct: 180 IKFIMEQTGSRVQISQKATSGINLPERVITITGEPEQNDKACAFIVNKIVEDPQSGSCPN 239
Query: 204 VPY-TYAG-VFFSGFHGMPYGAVPPPV---PAVPHNTAAHYGPNMG 244
+ Y TY G V + G PY + P+ A P AA N+G
Sbjct: 240 ISYATYTGPVANANPTGSPYASPMSPLQNGSASPTALAAQSLSNLG 285
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ + Y G +R+V +TG+ D
Sbjct: 68 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKS 127
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+ ++ K+ G P P P
Sbjct: 128 VHKFLMEKI-----------------------------GQAPRPPAKSPSE--------- 149
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
QN ++R + I V + G ++G+GG I I + +G+R+++S +
Sbjct: 150 -----QNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATSGINLP 204
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +TI+G A + I+ K+
Sbjct: 205 ERVITITGEPEQNDKACAFIVNKI 228
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 51/76 (67%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
D N + + V + +G ++G+GG+ ++E + SGARI++S +G+F GT+ RKVTI+G
Sbjct: 423 DGSKNVVELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGT 482
Query: 313 QRSIRTAESMIMQKVA 328
+ +TA+ ++ ++A
Sbjct: 483 PAATQTAQYLVRARIA 498
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ +FQ SGARIQ+S+ EF PGT +R + I+GT
Sbjct: 429 VELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQT 488
Query: 97 AVDLVIDKLLTE--LHAEDQ 114
A LV ++ E + A+ Q
Sbjct: 489 AQYLVRARIAQEEAMRAKKQ 508
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG+ I+++ + +GA IK+S DF+ GT+ER V I+G + S+++ +M+K+
Sbjct: 78 GSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKSVHKFLMEKIG 137
Query: 329 YA 330
A
Sbjct: 138 QA 139
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + L VP + G+I+GK G T+ F + S A I+IS+ G N+R VT+TGT
Sbjct: 424 GSKNVVELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTP 483
Query: 179 DEQMRALELILLKLSED 195
A L+ +++++
Sbjct: 484 AATQTAQYLVRARIAQE 500
>gi|443700302|gb|ELT99335.1| hypothetical protein CAPTEDRAFT_173082 [Capitella teleta]
Length = 552
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 124/217 (57%), Gaps = 12/217 (5%)
Query: 16 GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
G+ S PV SL+ ++ LV + AGA+IGKGG TI D Q ++GA +++S++++
Sbjct: 28 GRLSWIPVHSLTHRHCAN-ISLKVLVPSIAAGAIIGKGGETITDIQKETGATVKMSKNND 86
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-------LHAEDQADDVGTKTKLRLIV 128
F+PGT++R+ +++GT+D + + + +++++ + E +A+ K +++++V
Sbjct: 87 FYPGTSERVCLVNGTLDSVRKVIVFIMERIREKPDPNPKPCEGEMKANYERHK-QMKILV 145
Query: 129 PNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
PNS+ G +IGK GA I+ DDS A +++S+ L +R VT+ G ++ A++L+
Sbjct: 146 PNSTAGMVIGKGGAFIRQIKDDSGAYVQVSQKSKDMS-LPERCVTIAGDTEQNREAIDLV 204
Query: 189 LLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPYGA 223
L K+ ED + + Y V S G P+ A
Sbjct: 205 LEKIMEDPQSASCPNISYADVKGPVASSNPTGSPFAA 241
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 45/205 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP+ + G+IIGK G TI ++ A +K+S+ + Y G ++R+ + GTLD +
Sbjct: 48 LKVLVPSIAAGAIIGKGGETITDIQKETGATVKMSKNNDFYPGTSERVCLVNGTLDSVRK 107
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPA-VPHNTAAHYGPN 242
+ I+ ++ E P P P A+Y
Sbjct: 108 VIVFIMERIREK-----------------------------PDPNPKPCEGEMKANY--- 135
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
+R + I V + G V+G+GG I +I SGA ++VS + S
Sbjct: 136 -----------ERHKQMKILVPNSTAGMVIGKGGAFIRQIKDDSGAYVQVSQKSKDMS-L 183
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VTI+G R A ++++K+
Sbjct: 184 PERCVTIAGDTEQNREAIDLVLEKI 208
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 266 EHI-GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
EHI G ++G GG+ I+E+ + +G I++S +G + GT R V+I+G ++ A+S+I
Sbjct: 460 EHIVGAILGPGGKGIVELQRFTGTNIQISKKGIYVPGTRNRVVSITGTAGAVARAQSLIQ 519
Query: 325 QKVAY 329
Q++++
Sbjct: 520 QRISH 524
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
SL + V G ++G+GG I +I + +GA +K+S DF+ GTSER ++G S+R
Sbjct: 47 SLKVLVPSIAAGAIIGKGGETITDIQKETGATVKMSKNNDFYPGTSERVCLVNGTLDSVR 106
Query: 318 TAESMIMQKVAYASD 332
IM+++ D
Sbjct: 107 KVIVFIMERIREKPD 121
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G GG I + Q +G IQ+S+ + PGT +R++ I+GT + RA L+ +
Sbjct: 462 IVGAILGPGGKGIVELQRFTGTNIQISKKGIYVPGTRNRVVSITGTAGAVARAQSLIQQR 521
Query: 105 LLTE 108
+ E
Sbjct: 522 ISHE 525
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 157/305 (51%), Gaps = 34/305 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRKFQNNKD--DRTNS 258
+ V F+G G Y A+P P H A +H+ + G F D +T S
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSAGLDASAQTTS 242
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI
Sbjct: 243 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISL 299
Query: 319 AESMI 323
A+ +I
Sbjct: 300 AQYLI 304
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 80/209 (38%), Gaps = 63/209 (30%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+G I+ V + +
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD 207
Query: 106 LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSHFPMSHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
S A IKI+ + G DR VT+TG+
Sbjct: 268 QMSGAQIKIA---NPVEGSTDRQVTITGS 293
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 235 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 291
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 292 GSAASISLAQYLI 304
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 23/311 (7%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ T IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +S
Sbjct: 19 DPSVTLT-IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVS 72
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAGATIKSF 147
GT + I A L+ K + A +G T+ +RLIVP S CGS+IGK+G+ IK
Sbjct: 73 GTTNAIFSAFTLITKKFEEWCSQFNDAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 148 MDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+ I+++ L +S +R VTL+G+ ++ + + I L + E S P
Sbjct: 133 RQTTGCSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVMLESCPRSTVAKNP 188
Query: 206 YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTA--AHYGPNMGGRKFQNNKDDRTNSLTIGV 263
P + H A A G + N + + +T V
Sbjct: 189 LASLAALGLAGMN------PASTGGINHTAALAALAGSQLRTANAANRAQQQQHEMT--V 240
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+++ IG ++G+GG I EI QISGA I++S+ + G ++R +TISG S+ A+ +I
Sbjct: 241 SNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLI 300
Query: 324 MQKVAYASDRL 334
+++ + L
Sbjct: 301 NMRISMETAGL 311
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 93/235 (39%), Gaps = 57/235 (24%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR +V G++IGK GS I + + +G IQ++ E P +T+R + +SG+ ++I +
Sbjct: 109 IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVA--SEMLPNSTERAVTLSGSAEQITQ 166
Query: 97 AVDLVIDKLLTEL------------------------------HAEDQADDVGTKTKL-- 124
+ + +L H A G++ +
Sbjct: 167 CIYQICLVMLESCPRSTVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTAN 226
Query: 125 ----------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
+ V N G IIGK G I S A+I+IS + G DR +T+
Sbjct: 227 AANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITI 286
Query: 175 TGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGM-PYGAVPPPV 228
+G D A LI +++S +T AG+ G+H + P V P+
Sbjct: 287 SGNPDSVALAQYLINMRISMET------------AGLPIPGYHYIAPSAIVKTPI 329
>gi|340714094|ref|XP_003395567.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus terrestris]
gi|350427987|ref|XP_003494948.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus impatiens]
Length = 514
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM 105
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + E +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 166 KEECGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +K+S+ Y G +R+ +TG+L+ M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIMA 106
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ I+ K+ E + TV F SG TA
Sbjct: 107 VMDFIMDKIREKPDLTLKTTVD------FESG-----------------KTTA------- 136
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+ G I +I + G+ +++S + S
Sbjct: 137 ----------ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVS-LQ 185
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G + + R A MI+ KVA
Sbjct: 186 ERCITVIGEKENNRNALMMILAKVA 210
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
NNK+ T + I +A+ +G ++G GGR ++EI +SGA I++S +G F GT R VTI
Sbjct: 421 NNKE--TKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 478
Query: 310 SGPQRSIRTAESMIMQKVA 328
+G +I TA+ +I Q+++
Sbjct: 479 TGYPNAIGTAQYLIEQRIS 497
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
D T L + V G ++G+GG I ++ + +GAR+K+S DF+ GT+ER I+G
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSL 101
Query: 314 RSIRTAESMIMQKV 327
+I IM K+
Sbjct: 102 EAIMAVMDFIMDKI 115
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 432 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAIGTA-QY 490
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 491 LIEQRISEEEAK 502
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 157/307 (51%), Gaps = 34/307 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRKFQNNKD--DRT 256
+ + V F+G G Y A+P P H A +H+ G F D +T
Sbjct: 187 SSSPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQT 244
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI
Sbjct: 245 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASI 301
Query: 317 RTAESMI 323
A+ +I
Sbjct: 302 SLAQYLI 308
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 92/232 (39%), Gaps = 67/232 (28%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVD----LVIDKL------------------------------------- 105
I+G I+ V ++++ L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAI 207
Query: 106 ----LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 PQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 267
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IKI+ + G DR VT+TG+ A LI ++LS +T
Sbjct: 268 NEIRQMSGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 316
>gi|348537889|ref|XP_003456425.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oreochromis
niloticus]
Length = 496
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 117/223 (52%), Gaps = 38/223 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 93
Query: 96 RAVDLVIDK-------------------------------LLTELHAEDQADDVGTKTK- 123
D + +K L T H + D K++
Sbjct: 94 GVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQTLPTACHTTPKEDANPEKSRR 153
Query: 124 ---LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+LIVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++
Sbjct: 154 ANSAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTISGEPEQ 212
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+A+E+I+ K+ ED S + + Y+ V S G PY
Sbjct: 213 NRKAVEIIVQKIQEDPQSSSCLNISYSNITGPVANSNPTGSPY 255
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 94
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+ I K+ E +Q T P + P V P TA H P
Sbjct: 95 VHDFIAEKVREMPQSTQ-KTEPVSIL---------QPQTTVNPDRVKQTLPTACHTTPK- 143
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
K R NS + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 144 --EDANPEKSRRANSAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 200
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VTISG R A +I+QK+
Sbjct: 201 ERVVTISGEPEQNRKAVEIIVQKI 224
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 49/69 (71%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G Q + + A+
Sbjct: 415 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAAQ 474
Query: 321 SMIMQKVAY 329
+I Q++ Y
Sbjct: 475 YLISQRITY 483
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+ +
Sbjct: 413 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS-QAATQ 471
Query: 97 AVDLVIDKLLT 107
A +I + +T
Sbjct: 472 AAQYLISQRIT 482
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
T P + + + + + + +V N AG +IGKGG+T+ QSGA +QLS+ E
Sbjct: 140 TTPKEDANPEKSRRANSAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-N 198
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKL 105
+R++ ISG ++ +AV++++ K+
Sbjct: 199 LQERVVTISGEPEQNRKAVEIIVQKI 224
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I
Sbjct: 391 ASPLVASSLLATEKLAE------GAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARI 444
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+IS+ G +R VT+TG+ A LI +++
Sbjct: 445 QISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQRIT 482
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 156/305 (51%), Gaps = 34/305 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRKFQNNKD--DRTNS 258
+ V F+G G Y A+P P H A +H+ G F D +T S
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTS 242
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI
Sbjct: 243 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISL 299
Query: 319 AESMI 323
A+ +I
Sbjct: 300 AQYLI 304
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 80/209 (38%), Gaps = 63/209 (30%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+G I+ V + +
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD 207
Query: 106 LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
S A IKI+ + G DR VT+TG+
Sbjct: 268 QMSGAQIKIA---NPVEGSTDRQVTITGS 293
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 235 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 291
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 292 GSAASISLAQYLI 304
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 160/317 (50%), Gaps = 37/317 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP------NMGGRKFQNNKDDRTN 257
+ V F+G G Y A+P P H A P N G + ++
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGFTGMDASAQTSSH 242
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+TI ++ IG ++GR G I EI Q+SGA+IK+++ D G+++R+VTI+G SI
Sbjct: 243 EMTI--PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVD---GSTDRQVTITGSPASIS 297
Query: 318 TAESMIMQKVAYASDRL 334
AE +I +++ + L
Sbjct: 298 LAEYLINARLSSEATGL 314
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 62/226 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+GT I+ V + +
Sbjct: 148 IAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPD 207
Query: 106 LTELH--AEDQA--------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
LT+LH A Q+ D + + +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSPFPIAPSNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G DR VT+TG+ A LI +LS +
Sbjct: 268 MSGAQIKIA---NPVDGSTDRQVTITGSPASISLAEYLINARLSSE 310
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 115/201 (57%), Gaps = 18/201 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 50 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 108
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 109 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 167
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED +
Sbjct: 168 TVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 226
Query: 203 TVPYT--YAGVFFSGFHGMPY 221
+ Y V S G PY
Sbjct: 227 NISYANVTGPVANSNPTGFPY 247
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 389 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 448
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 449 ITGTPAATQAAQYLITQRITY 469
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 110
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG-AVPPPVPAVPHNTAAHYGPN 242
I K+ E MP A PV + T +
Sbjct: 111 VHGFIAEKIRE------------------------MPQNVAKTEPVSILQPQTTVN---- 142
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + I V + G ++G+GG + I + SGA +++S + D +
Sbjct: 143 ----------PDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGIN-L 191
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 192 QERVVTVSGEPEQNRKAVELIIQKI 216
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 388 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 447
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 448 TITGTPAATQAAQYLITQRITYE 470
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 33 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 92
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 93 GTTERVCLIQGTIEALNAVHGFIAEKI 119
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 394 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 453
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 454 AATQAAQYLITQRIT 468
>gi|380026049|ref|XP_003696774.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Apis florea]
Length = 514
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM 105
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + E +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 166 KEECGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +K+S+ Y G +R+ +TG+L+ M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIMA 106
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ I+ K+ E + TV F SG TA
Sbjct: 107 VMDFIMDKIREKPDLTLKTTVD------FESG-----------------KTTA------- 136
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+ G I +I + G+ +++S + S
Sbjct: 137 ----------ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVS-LQ 185
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G + + R A MI+ KVA
Sbjct: 186 ERCITVIGEKENNRNALMMILAKVA 210
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
NNK+ T + I +A+ +G ++G GGR ++EI +SGA I++S +G F GT R VTI
Sbjct: 421 NNKE--TKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 478
Query: 310 SGPQRSIRTAESMIMQKVA 328
+G +I TA+ +I Q+++
Sbjct: 479 TGYPNAIGTAQYLIEQRIS 497
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
D T L + V G ++G+GG I ++ + +GAR+K+S DF+ GT+ER I+G
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSL 101
Query: 314 RSIRTAESMIMQKV 327
+I IM K+
Sbjct: 102 EAIMAVMDFIMDKI 115
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 432 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAIGTA-QY 490
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 491 LIEQRISEEEAK 502
>gi|328784994|ref|XP_003250531.1| PREDICTED: RNA-binding protein Nova-2-like [Apis mellifera]
Length = 514
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM 105
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + E +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 166 KEECGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +K+S+ Y G +R+ +TG+L+ M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIMA 106
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ I+ K+ E + TV F SG TA
Sbjct: 107 VMDFIMDKIREKPDLTLKTTVD------FESG-----------------KTTA------- 136
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+ G I +I + G+ +++S + S
Sbjct: 137 ----------ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVS-LQ 185
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G + + R A MI+ KVA
Sbjct: 186 ERCITVIGEKENNRNALMMILAKVA 210
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
NNK+ T + I +A+ +G ++G GGR ++EI +SGA I++S +G F GT R VTI
Sbjct: 421 NNKE--TKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 478
Query: 310 SGPQRSIRTAESMIMQKVA 328
+G +I TA+ +I Q+++
Sbjct: 479 TGYPNAIGTAQYLIEQRIS 497
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
D T L + V G ++G+GG I ++ + +GAR+K+S DF+ GT+ER I+G
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSL 101
Query: 314 RSIRTAESMIMQKV 327
+I IM K+
Sbjct: 102 EAIMAVMDFIMDKI 115
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 432 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAIGTA-QY 490
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 491 LIEQRISEEEAK 502
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 156/305 (51%), Gaps = 34/305 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRKFQNNKD--DRTNS 258
+ V F+G G Y A+P P H A +H+ G F D +T S
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTS 242
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI
Sbjct: 243 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISL 299
Query: 319 AESMI 323
A+ +I
Sbjct: 300 AQYLI 304
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 89/228 (39%), Gaps = 63/228 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+G I+ V + +
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD 207
Query: 106 LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IKI+ + G DR VT+TG+ A LI ++LS +T
Sbjct: 268 QMSGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 312
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 160/317 (50%), Gaps = 37/317 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP------NMGGRKFQNNKDDRTN 257
+ V F+G G Y A+P P H A P N G + ++
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGFTGIDASAQTSSH 242
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+TI ++ IG ++GR G I EI Q+SGA+IK+++ D G+++R+VTI+G SI
Sbjct: 243 EMTI--PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVD---GSTDRQVTITGSPASIS 297
Query: 318 TAESMIMQKVAYASDRL 334
AE +I +++ + L
Sbjct: 298 LAEYLINARLSSEATGL 314
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 62/226 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+GT I+ V + +
Sbjct: 148 IAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPD 207
Query: 106 LTELH--AEDQA--------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
LT+LH A Q+ D + + +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSPFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G DR VT+TG+ A LI +LS +
Sbjct: 268 MSGAQIKIA---NPVDGSTDRQVTITGSPASISLAEYLINARLSSE 310
>gi|380026051|ref|XP_003696775.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Apis florea]
Length = 522
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM 105
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + E +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 166 KEECGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +K+S+ Y G +R+ +TG+L+ M
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIMA 106
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ I+ K+ E + TV F SG TA
Sbjct: 107 VMDFIMDKIREKPDLTLKTTVD------FESG-----------------KTTA------- 136
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+ G I +I + G+ +++S + S
Sbjct: 137 ----------ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVS-LQ 185
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G + + R A MI+ KVA
Sbjct: 186 ERCITVIGEKENNRNALMMILAKVA 210
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
NNK+ T + I +A+ +G ++G GGR ++EI +SGA I++S +G F GT R VTI
Sbjct: 429 NNKE--TKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 486
Query: 310 SGPQRSIRTAESMIMQKVA 328
+G +I TA+ +I Q+++
Sbjct: 487 TGYPNAIGTAQYLIEQRIS 505
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
+HYG GG D T L + V G ++G+GG I ++ + +GAR+K+S
Sbjct: 35 SHYGS--GG--------DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSH 84
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASD 332
DF+ GT+ER I+G +I IM K+ D
Sbjct: 85 DFYPGTTERVCLITGSLEAIMAVMDFIMDKIREKPD 120
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 440 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAIGTA-QY 498
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 499 LIEQRISEEEAK 510
>gi|321468687|gb|EFX79671.1| hypothetical protein DAPPUDRAFT_225024 [Daphnia pulex]
Length = 573
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 112/195 (57%), Gaps = 10/195 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
Y++ LV + AGA+IGKGG TI Q + ARI++S++++F+PGTT+R+ +I GT + ++
Sbjct: 57 YLKVLVPSVAAGAIIGKGGETIAQVQKEVNARIKMSKANDFYPGTTERVCLIKGTTESVM 116
Query: 96 RAVDLVIDKLLTELHAEDQ-ADDVGTKT------KLRLIVPNSSCGSIIGKAGATIKSFM 148
+ + +K+ + + A D +KT +++++VPNS+ G IIGK G+ IK
Sbjct: 117 SMLTFICEKIRDKPDPNAKPAMDFDSKTPAERDKQVKILVPNSTAGMIIGKGGSFIKQIK 176
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
++S A I+IS+ L +R +T+ G D +A +IL K++ED + V Y
Sbjct: 177 EESGAYIQISQKAKD-QALQERCITVIGDSDCNRKACCMILSKIAEDPQSGSCLNVSYAE 235
Query: 209 AGVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 236 VTGPVANFNPTGSPY 250
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 42/205 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP+ + G+IIGK G TI + A IK+S+ + Y G +R+ + GT + M
Sbjct: 58 LKVLVPSVAAGAIIGKGGETIAQVQKEVNARIKMSKANDFYPGTTERVCLIKGTTESVMS 117
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
L I K+ + P PA+ ++
Sbjct: 118 MLTFICEKIRDK---------------------------PDPNAKPAMDFDSKT------ 144
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+R + I V + G ++G+GG I +I + SGA I++S +
Sbjct: 145 --------PAERDKQVKILVPNSTAGMIIGKGGSFIKQIKEESGAYIQISQKAK-DQALQ 195
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER +T+ G R A MI+ K+A
Sbjct: 196 ERCITVIGDSDCNRKACCMILSKIA 220
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 266 EHI-GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
EHI G ++G GG++++EI SGA I++S +G + GT R VTISG +I TA+ +I
Sbjct: 460 EHIVGAILGPGGKSLLEIQHFSGANIQISKKGIYAPGTRNRWVTISGTPNAISTAQYLIE 519
Query: 325 QKVA 328
Q+++
Sbjct: 520 QRIS 523
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G GG ++ + Q SGA IQ+S+ + PGT +R + ISGT + I A L+ +
Sbjct: 462 IVGAILGPGGKSLLEIQHFSGANIQISKKGIYAPGTRNRWVTISGTPNAISTAQYLIEQR 521
Query: 105 LLTE 108
+ E
Sbjct: 522 ISEE 525
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S P E+ ++ LV N AG +IGKGGS I + +SGA IQ+S+ + +R I
Sbjct: 142 SKTPAERDKQVKILVPNSTAGMIIGKGGSFIKQIKEESGAYIQISQKAKDQ-ALQERCIT 200
Query: 87 ISGTIDEILRAVDLVIDKL 105
+ G D +A +++ K+
Sbjct: 201 VIGDSDCNRKACCMILSKI 219
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 128/226 (56%), Gaps = 12/226 (5%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + ++ L+ + AG++IGKGG TI Q ++GA I+LS+S++F+PGTT+RI++I+G
Sbjct: 61 PEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITG 120
Query: 90 TIDEILRAVDLVIDKLLTELH------AEDQADDVGTKTKLRLIVPNSSCGSIIGKAGAT 143
+ D + +++K+ +E A++ K +++++VPNS+ G IIGK GAT
Sbjct: 121 SEDSLKSVHKFLMEKISQAPQPPAKSPSEQNANNNRAK-QVKIVVPNSTAGLIIGKGGAT 179
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
IK M+ + + ++IS+ + L +R++T+TG ++ +A I+ K+ ED
Sbjct: 180 IKFIMEQTGSRVQISQKATNGINLPERVITITGEPEQNDKACAFIVNKIVEDPQSGSCPN 239
Query: 204 VPY-TYAG-VFFSGFHGMPYGAVPPPV---PAVPHNTAAHYGPNMG 244
+ Y TY G V + G PY + P+ A P AA N+G
Sbjct: 240 ISYATYTGPVANANPTGSPYASPMSPLQNGSASPTALAAQSLSNLG 285
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 43/204 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ + Y G +R+V +TG+ D
Sbjct: 68 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKS 127
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+ ++ K+S+ P P P
Sbjct: 128 VHKFLMEKISQ-----------------------------APQPPAKSPSE--------- 149
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
QN ++R + I V + G ++G+GG I I + +G+R+++S +
Sbjct: 150 -----QNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATNGINLP 204
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +TI+G A + I+ K+
Sbjct: 205 ERVITITGEPEQNDKACAFIVNKI 228
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 51/76 (67%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
D N + + V + +G ++G+GG+ ++E + SGARI++S +G+F GT+ RKVTI+G
Sbjct: 423 DGSKNVVELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGT 482
Query: 313 QRSIRTAESMIMQKVA 328
+ +TA+ ++ ++A
Sbjct: 483 PAATQTAQYLVRARIA 498
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ +FQ SGARIQ+S+ EF PGT +R + I+GT
Sbjct: 429 VELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQT 488
Query: 97 AVDLVIDKLLTE--LHAEDQ 114
A LV ++ E + A+ Q
Sbjct: 489 AQYLVRARIAQEEAMRAKKQ 508
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 44/62 (70%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG+ I+++ + +GA IK+S DF+ GT+ER V I+G + S+++ +M+K++
Sbjct: 78 GSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKSVHKFLMEKIS 137
Query: 329 YA 330
A
Sbjct: 138 QA 139
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + L VP + G+I+GK G T+ F + S A I+IS+ G N+R VT+TGT
Sbjct: 424 GSKNVVELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTP 483
Query: 179 DEQMRALELILLKLSED 195
A L+ +++++
Sbjct: 484 AATQTAQYLVRARIAQE 500
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 110/184 (59%), Gaps = 16/184 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 109
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 168
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED +
Sbjct: 169 TVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Query: 203 TVPY 206
+ Y
Sbjct: 228 NISY 231
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 390 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 449
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 450 ITGTPAATQAAQYLITQRITY 470
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 111
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG-AVPPPVPAVPHNTAAHYGPN 242
I K+ E MP A PV + T +
Sbjct: 112 VHGFIAEKIRE------------------------MPQNVAKTEPVSILQPQTTVN---- 143
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + I V + G ++G+GG + I + SGA +++S + D +
Sbjct: 144 ----------PDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGIN-L 192
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 193 QERVVTVSGEPEQNRKAVELIIQKI 217
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 389 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 448
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 449 TITGTPAATQAAQYLITQRITYE 471
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTIEALNAVHGFIAEKI 120
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 395 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 454
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 455 AATQAAQYLITQRIT 469
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 155/306 (50%), Gaps = 37/306 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP------NMGGRKFQNNKDDRTN 257
+ V F+G G Y A+P P H A P N G + ++
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGFTGIDASAQTSSH 242
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+TI ++ IG ++GR G I EI Q+SGA+IK+++ D G+++R+VTI+G SI
Sbjct: 243 EMTI--PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVD---GSTDRQVTITGSPASIS 297
Query: 318 TAESMI 323
AE +I
Sbjct: 298 LAEYLI 303
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 62/208 (29%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+GT I+ V + +
Sbjct: 148 IAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPD 207
Query: 106 LTELH--AEDQA--------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
LT+LH A Q+ D + + +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSPFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGT 177
S A IKI+ + G DR VT+TG+
Sbjct: 268 MSGAQIKIA---NPVDGSTDRQVTITGS 292
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A SMI++
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTTAIFKAFSMIIE 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|256079872|ref|XP_002576208.1| rna-binding protein related [Schistosoma mansoni]
gi|353231011|emb|CCD77429.1| rna-binding protein related [Schistosoma mansoni]
Length = 666
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 8/210 (3%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + + + LV + AGA+IGKGG I + Q+Q+ A++++S+++ F+PGTT+R+ +I G
Sbjct: 38 PAKGNVHFKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIVG 97
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVG-----TKTKLRLIVPNSSCGSIIGKAGATI 144
TI+ ILR + +K+ + + + G +++++VPNS+ G IIGK G+ I
Sbjct: 98 TIESILRVFQYISEKIYEKPESVPKTGCEGRVLTERHKQVKILVPNSTAGMIIGKGGSFI 157
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K D + I++S+ L +R VT+ G L + A+ LIL K++ED S +
Sbjct: 158 KELKDTTGVFIQVSQ-KSKELNLAERCVTVAGELSQTRDAIALILSKIAEDPQSSSCPNI 216
Query: 205 PYT-YAGVFFSGF-HGMPYGAVPPPVPAVP 232
Y+ G S + G PY P +P
Sbjct: 217 SYSEIIGPVASAYPTGSPYALAVGSHPGLP 246
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 44/205 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+++VP+ + G+IIGK G I + + A +K+S+ + Y G +R+ + GT++ +R
Sbjct: 45 FKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIVGTIESILR 104
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+ I + +Y + +VP T
Sbjct: 105 VFQYI-----SEKIYEKPESVPKT----------------------------------GC 125
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
GR +R + I V + G ++G+GG I E+ +G I+VS + + +
Sbjct: 126 EGRVLT----ERHKQVKILVPNSTAGMIIGKGGSFIKELKDTTGVFIQVSQKSKELN-LA 180
Query: 304 ERKVTISGPQRSIRTAESMIMQKVA 328
ER VT++G R A ++I+ K+A
Sbjct: 181 ERCVTVAGELSQTRDAIALILSKIA 205
>gi|198433420|ref|XP_002121389.1| PREDICTED: similar to neuro-oncological ventral antigen 1 [Ciona
intestinalis]
Length = 543
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 114/177 (64%), Gaps = 6/177 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ AGAVIGKGG I Q SGA I+LS++ +F+PGT DR+++I GT + +++
Sbjct: 49 LKVLIPGYAAGAVIGKGGQIIVQLQKDSGAIIKLSKAKDFYPGTQDRVVLIQGTAEGLMK 108
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+ +I+K+ +D A +G + K +++IVPN++ G +IGKAGATIK+ M++S + +
Sbjct: 109 VQNTIIEKVYEFPVPKDLAAIIGDRPKQVKIIVPNTTAGLVIGKAGATIKTIMEESGSKV 168
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY-TYAGV 211
++S+ + +R++T+ G + M A +I+ K+ +D Q+ + P+ +Y+G+
Sbjct: 169 QLSQKPDG-VNVQERVITIKGEKHQLMTASNIIIDKIKDD---PQSASCPHISYSGI 221
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 48/204 (23%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P + G++IGK G I DS A+IK+S+ Y G DR+V + GT + M+
Sbjct: 49 LKVLIPGYAAGAVIGKGGQIIVQLQKDSGAIIKLSKAKDFYPGTQDRVVLIQGTAEGLMK 108
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I+ K+ E P VP + AA G
Sbjct: 109 VQNTIIEKVYE------------------------FP----------VPKDLAAIIG--- 131
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + I V + G V+G+ G I I + SG+++++S + D +
Sbjct: 132 ----------DRPKQVKIIVPNTTAGLVIGKAGATIKTIMEESGSKVQLSQKPDGVN-VQ 180
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +TI G + + TA ++I+ K+
Sbjct: 181 ERVITIKGEKHQLMTASNIIIDKI 204
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 227 PVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQIS 286
PV PH+T + + + D + ++ + + + IG V+G+ GR ++E +S
Sbjct: 436 PVSFSPHSTVSIL-------SIEKSSDGQKETIELAIPENLIGAVLGKAGRTLVEYQDVS 488
Query: 287 GARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASD 332
GA+I++S +GD+ +GT R+VTI+G +TA+ +I Q+VA A +
Sbjct: 489 GAKIQISKKGDYVAGTRNRRVTITGKPPCPQTAQFLITQRVASAQN 534
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
K L++ ++P ++ +V N AG VIGK G+TI +SG+++QLS+ + +R
Sbjct: 124 KDLAAIIGDRPKQVKIIVPNTTAGLVIGKAGATIKTIMEESGSKVQLSQKPDGV-NVQER 182
Query: 84 IIMISGTIDEILRAVDLVIDKL 105
+I I G +++ A +++IDK+
Sbjct: 183 VITIKGEKHQLMTASNIIIDKI 204
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I + L GAV+GK G T+ ++Q SGA+IQ+S+ ++ GT +R + I+G
Sbjct: 461 IELAIPENLIGAVLGKAGRTLVEYQDVSGAKIQISKKGDYVAGTRNRRVTITGKPPCPQT 520
Query: 97 AVDLVIDKLLTELHAEDQ 114
A L+ ++ + +A Q
Sbjct: 521 AQFLITQRVASAQNARAQ 538
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E +D G K + L +P + G+++GKAG T+ + D S A I+IS+ G
Sbjct: 448 LSIEKSSD--GQKETIELAIPENLIGAVLGKAGRTLVEYQDVSGAKIQISKKGDYVAGTR 505
Query: 169 DRLVTLTG 176
+R VT+TG
Sbjct: 506 NRRVTITG 513
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 110/184 (59%), Gaps = 16/184 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 50 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 108
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 109 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 167
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED +
Sbjct: 168 TVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 226
Query: 203 TVPY 206
+ Y
Sbjct: 227 NISY 230
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 389 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 448
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 449 ITGTPAATQAAQYLITQRITY 469
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 110
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG-AVPPPVPAVPHNTAAHYGPN 242
I K+ E MP A PV + T +
Sbjct: 111 VHGFIAEKIRE------------------------MPQNVAKTEPVSILQPQTTVN---- 142
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + I V + G ++G+GG + I + SGA +++S + D +
Sbjct: 143 ----------PDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGIN-L 191
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 192 QERVVTVSGEPEQNRKAVELIIQKI 216
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 388 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 447
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 448 TITGTPAATQAAQYLITQRITYE 470
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 33 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 92
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 93 GTTERVCLIQGTIEALNAVHGFIAEKI 119
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 394 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 453
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 454 AATQAAQYLITQRIT 468
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 163/325 (50%), Gaps = 44/325 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTAHSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFS--------GFHGMPY-----GAVPPPVPAVPHNTAAHYGP------NMGGRKFQ 249
+ V F+ G H +P A+ P + + H A GP N G
Sbjct: 185 SPVIFAGGQAYAVQGQHAIPQPDSSSAAISPQLSKL-HQLAMQQGPFPMATCNQGFTGMD 243
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
+ ++ +TI ++ IG ++GR G I EI Q+SGA+IK+++ D G+++R+VTI
Sbjct: 244 ASAQACSHEMTI--PNDLIGCIIGRQGAKISEIRQMSGAQIKIANPVD---GSTDRQVTI 298
Query: 310 SGPQRSIRTAESMIMQKVAYASDRL 334
+G SI AE +I +++ + L
Sbjct: 299 TGSPASIGLAEYLIKARLSSEATGL 323
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+GT I+ V + +L
Sbjct: 148 IAGTAHSIIECVKQICVVML 167
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 16/184 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 168
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED +
Sbjct: 169 TVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Query: 203 TVPY 206
+ Y
Sbjct: 228 NISY 231
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 390 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 449
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 450 ITGTPAATQAAQYLITQRITY 470
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG-AVPPPVPAVPHNTAAHYGPN 242
I K+ E MP A PV + T +
Sbjct: 112 VHGFIAEKIRE------------------------MPQNVAKTEPVSILQPQTTVN---- 143
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + I V + G ++G+GG + I + SGA +++S + D +
Sbjct: 144 ----------PDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGIN-L 192
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 193 QERVVTVSGEPEQNRKAVELIIQKI 217
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 389 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 448
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 449 TITGTPAATQAAQYLITQRITYE 471
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTVEALNAVHGFIAEKI 120
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 395 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 454
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 455 AATQAAQYLITQRIT 469
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 16/184 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 168
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED +
Sbjct: 169 TVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Query: 203 TVPY 206
+ Y
Sbjct: 228 NISY 231
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 390 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 449
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 450 ITGTPAATQAAQYLITQRITY 470
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG-AVPPPVPAVPHNTAAHYGPN 242
I K+ E MP A PV + T +
Sbjct: 112 VHGFIAEKIRE------------------------MPQNVAKTEPVSILQPQTTVN---- 143
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + I V + G ++G+GG + I + SGA +++S + D +
Sbjct: 144 ----------PDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGIN-L 192
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 193 QERVVTVSGEPEQNRKAVELIIQKI 217
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 389 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 448
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 449 TITGTPAATQAAQYLITQRITYE 471
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTVEALNAVHGFIAEKI 120
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 395 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 454
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 455 AATQAAQYLITQRIT 469
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 156/307 (50%), Gaps = 34/307 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRKFQNNKD--DRT 256
+ + V F+G G Y A+P P H A +H+ G F D +T
Sbjct: 187 SSSPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQT 244
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
S + + ++ IG ++GR G I EI Q+SGA+IK ++ G+++R+VTI+G SI
Sbjct: 245 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANP---VEGSTDRQVTITGSAASI 301
Query: 317 RTAESMI 323
A+ +I
Sbjct: 302 SLAQYLI 308
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 91/232 (39%), Gaps = 67/232 (28%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVD----LVIDKL------------------------------------- 105
I+G I+ V ++++ L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAI 207
Query: 106 ----LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 PQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 267
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IK + + G DR VT+TG+ A LI ++LS +T
Sbjct: 268 NEIRQMSGAQIKTA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 316
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 16/184 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 168
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED +
Sbjct: 169 TVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Query: 203 TVPY 206
+ Y
Sbjct: 228 NISY 231
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 390 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 449
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 450 ITGTPAATQAAQYLITQRITY 470
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG-AVPPPVPAVPHNTAAHYGPN 242
I K+ E MP A PV + T +
Sbjct: 112 VHGFIAEKIRE------------------------MPQNVAKTEPVSILQPQTTVN---- 143
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + I V + G ++G+GG + + + SGA +++S + D +
Sbjct: 144 ----------PDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGIN-L 192
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 193 QERVVTVSGEPEQNRKAVELIIQKI 217
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 389 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 448
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 449 TITGTPAATQAAQYLITQRITYE 471
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTVEALNAVHGFIAEKI 120
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 395 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 454
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 455 AATQAAQYLITQRIT 469
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 162/325 (49%), Gaps = 46/325 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTSIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ +K +RL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITVAGTPQSIIECVKQICIVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPP-VPAVP-----HNTAAHYGP------NMGGRKFQNN 251
+ V F+G G Y A+P P V P H A P N G FQ
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDVSEGPSLTKLHQLAMQQSPFPIAHSNQG---FQAG 239
Query: 252 KD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
D +T S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI
Sbjct: 240 MDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTI 296
Query: 310 SGPQRSIRTAESMIMQKVAYASDRL 334
+G SI AE +I +++ + L
Sbjct: 297 TGSHASISLAEYLINARLSSEATGL 321
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
++GT I+ V + +L
Sbjct: 148 VAGTPQSIIECVKQICIVML 167
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 159/316 (50%), Gaps = 34/316 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPLSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAH-----YGPNMGGRKFQNNKDDRTNS 258
+ V F+G G Y A+P P H A P+ G + +T S
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTAGMDATTQTGS 242
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI
Sbjct: 243 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSNDRQVTITGSPASISL 299
Query: 319 AESMIMQKVAYASDRL 334
AE +I +++ + L
Sbjct: 300 AEYLINARLSSEATGL 315
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+GT I+ V + +L
Sbjct: 148 IAGTPLSIIECVKQICVVML 167
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 154/305 (50%), Gaps = 34/305 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPLSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAH-----YGPNMGGRKFQNNKDDRTNS 258
+ V F+G G Y A+P P H A P+ G + +T S
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTAGMDASAQTGS 242
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + ++ IG ++GR G I EI Q+SGA+IK+++ G+S+R+VTI+G SI
Sbjct: 243 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSSDRQVTITGSPASISL 299
Query: 319 AESMI 323
AE +I
Sbjct: 300 AEYLI 304
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+GT I+ V + +L
Sbjct: 148 IAGTPLSIIECVKQICVVML 167
>gi|301768705|ref|XP_002919771.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 493
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 16/184 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 61 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 119
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 120 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 178
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED +
Sbjct: 179 TVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 237
Query: 203 TVPY 206
+ Y
Sbjct: 238 NISY 241
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 400 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 459
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 460 ITGTPAATQAAQYLITQRITY 480
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 62 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 121
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG-AVPPPVPAVPHNTAAHYGPN 242
I K+ E MP A PV + T +
Sbjct: 122 VHGFIAEKIRE------------------------MPQNVAKTEPVSILQPQTTVN---- 153
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + I V + G ++G+GG + I + SGA +++S + D +
Sbjct: 154 ----------PDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGIN-L 202
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 203 QERVVTVSGEPEQNRKAVELIIQKI 227
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 399 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 458
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 459 TITGTPAATQAAQYLITQRITYE 481
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 405 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 464
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 465 AATQAAQYLITQRIT 479
>gi|148222190|ref|NP_001086143.1| neuro-oncological ventral antigen 1 [Xenopus laevis]
gi|49258011|gb|AAH74252.1| MGC84002 protein [Xenopus laevis]
Length = 484
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 16/184 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 168
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED +
Sbjct: 169 TVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIVQKIQEDPQSGSCL 227
Query: 203 TVPY 206
+ Y
Sbjct: 228 NISY 231
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 391 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 450
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q+V Y
Sbjct: 451 ITGTPAATQAAQYLITQRVTY 471
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG-AVPPPVPAVPHNTAAHYGPN 242
I K+ E MP A PV + T +
Sbjct: 112 VHGFIAEKIRE------------------------MPQNVAKTEPVSILQPQTTVN---- 143
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + I V + G ++G+GG + + + SGA +++S + D +
Sbjct: 144 ----------PDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGIN-L 192
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 193 QERVVTVSGEPEQNRKAVELIVQKI 217
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 390 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 449
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 450 TITGTPAATQAAQYLITQRVTYE 472
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQFFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTVEALNAVHGFIAEKI 120
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 396 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 455
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 456 AATQAAQYLITQRVT 470
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 120/210 (57%), Gaps = 16/210 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 15 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 73
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 74 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 133
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 134 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 192
Query: 204 VPYT-YAG-VFFSGFHGMPYGAVPPPVPAV 231
+ Y AG V S G PY + +PAV
Sbjct: 193 ISYANVAGPVANSNPTGSPYASPADVLPAV 222
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 16 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 75
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 76 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 106
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 107 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 157
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 158 ERVVTVSGEPEQVHKAVSAIVQKV 181
>gi|118137282|pdb|2ANN|A Chain A, Crystal Structure (I) Of Nova-1 Kh1KH2 DOMAIN TANDEM WITH
25 NT RNA Hairpin
Length = 178
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 107/178 (60%), Gaps = 26/178 (14%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 7 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 65
Query: 96 RAVDLVIDKLLTELHAE------------------DQADDVGTKTKLRLIVPNSSCGSII 137
AV I + + E+ D+A+ V ++IVPNS+ G II
Sbjct: 66 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRANQV------KIIVPNSTAGLII 119
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
GK GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 120 GKGGATVKAIMEQSGAWVQLSQKPDG-INLQNRVVTVSGEPEQNRKAVELIIQKIQED 176
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 38/210 (18%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+G++ L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT
Sbjct: 2 LGSQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 61
Query: 178 LDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
++ + HG + + +P N A
Sbjct: 62 IEA--------------------------------LNAVHGF----IAEKIREMPQNVAK 85
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD 297
++ + N DR N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 86 TEPVSILQPQTTVN-PDRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 144
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ R VT+SG R A +I+QK+
Sbjct: 145 GIN-LQNRVVTVSGEPEQNRKAVELIIQKI 173
>gi|195617550|gb|ACG30605.1| hypothetical protein [Zea mays]
Length = 104
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 67/99 (67%), Gaps = 5/99 (5%)
Query: 1 METNESSYVPSPDVHGKRS-----TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGS 55
ME S Y SP+ KR+ S D EKP ++RFLVSN AG +IGKGGS
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKGGS 60
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
TINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG E+
Sbjct: 61 TINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEV 99
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ DD LR +V N+S G IIGK G+TI F S A I++SR + G NDR++
Sbjct: 31 EEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRII 90
Query: 173 TLTGTLDE 180
++G E
Sbjct: 91 MVSGLFGE 98
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
V++ G ++G+GG I + SGARI++S +FF GT++R + +SG
Sbjct: 46 VSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSG 94
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 155/305 (50%), Gaps = 34/305 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ L L+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQIFVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRKFQNNKD--DRTNS 258
+ V F+G G Y A+P P H A +H+ G F D +T S
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAIQQSHFPMTHGNTGFSAGLDASAQTTS 242
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI
Sbjct: 243 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISL 299
Query: 319 AESMI 323
A+ +I
Sbjct: 300 AQYLI 304
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 98/260 (37%), Gaps = 71/260 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P + +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLSLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+G I+ V + +
Sbjct: 148 IAGIPQSIIECVKQIFVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD 207
Query: 106 LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAIQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
S A IKI+ + G DR VT+TG+ A LI ++LS L + M Y
Sbjct: 268 QMSGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLS---LVTGGMGSSYNN 321
Query: 209 AGVFFSGFHGMPYGAVPPPV 228
A +P+ PPP+
Sbjct: 322 ADSSI-----IPFCCSPPPM 336
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 159/316 (50%), Gaps = 34/316 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPLSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAH-----YGPNMGGRKFQNNKDDRTNS 258
+ V F+G G Y A+P P H A P+ G + +T S
Sbjct: 185 SPVTFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTAGMDATTQTGS 242
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI
Sbjct: 243 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSNDRQVTITGSPASISL 299
Query: 319 AESMIMQKVAYASDRL 334
AE +I +++ + L
Sbjct: 300 AEYLINARLSSEATGL 315
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
I I+GT I+ V + +L
Sbjct: 146 ITIAGTPLSIIECVKQICVVML 167
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 167/356 (46%), Gaps = 51/356 (14%)
Query: 13 DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
+ G S AP+K DP+ T IR ++ G++IGK G +N F+ +SGA+I +S
Sbjct: 5 NTSGSASGAPIKL--EDPSVTLT-IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD 61
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG----TKTKLRLIV 128
+RI+ +SGT I A L+ K Q +DVG T+ +RLIV
Sbjct: 62 GS-----CPERIVTVSGTTSAIFAAFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIV 113
Query: 129 PNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALE 186
P S CGS+IGK+G+ IK ++ I+++ L +S +R VTL+G+ ++ + +
Sbjct: 114 PASQCGSLIGKSGSKIKEIRQNTGCSIQVASEMLPNS----TERAVTLSGSAEQITQCIY 169
Query: 187 LILLKLSEDTLYSQTM--------TVPYTYA-GVFFS--GFHGMPYGAV----------- 224
I L + E T+ T P A G F+ G + +P V
Sbjct: 170 QICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVSKNPLASLAAL 229
Query: 225 ------PPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRN 278
P + H A + N + + +T V+++ IG ++G+GG
Sbjct: 230 GLAGMTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMT--VSNDLIGCIIGKGGTK 287
Query: 279 IMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
I EI QISGA I++S+ + G ++R +TISG S+ A+ +I +++ + L
Sbjct: 288 IAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 343
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 269 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 328
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGM-PYGAVPPPV 228
LI +++S +T AG+ G+H + P V P+
Sbjct: 329 QYLINMRISMET------------AGLPIPGYHYIAPSAIVKTPI 361
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 114/201 (56%), Gaps = 14/201 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT + +
Sbjct: 119 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 178
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATI 144
A + +K+ A + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 179 AAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 238
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S + +
Sbjct: 239 KAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNI 297
Query: 205 PYT-YAG-VFFSGFHGMPYGA 223
Y AG V S G PY +
Sbjct: 298 SYANVAGPVANSNPTGSPYAS 318
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 479 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 538
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 539 YLISQRVTY 547
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 120 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 179
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A I K+ E Q MT P N+
Sbjct: 180 AHSFIAEKVRE---IPQAMTKPEVV---------------------------------NI 203
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+ N DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 204 LQPQTTMN-PDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 261
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 262 ERVVTVSGEPEQVHKAVSAIVQKV 285
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 477 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 530
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 102 PEVVCTKRINTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 161
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ A S I +KV
Sbjct: 162 GTTERVCLVQGTAEALNAAHSFIAEKV 188
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 463 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 521
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 522 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 549
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 153/296 (51%), Gaps = 33/296 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G ++ + +SGARI +S + +RII ++G + I +A ++IDKL
Sbjct: 7 GSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFKAFAMIIDKLE 61
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDH 162
++ + ++ LRL+VP S CGS+IGK G IK + + A ++++ L +
Sbjct: 62 EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 121
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY----TYAGVFFSGF 216
S +R +T+ G + ++ I + + E S + +T+PY + + V F+G
Sbjct: 122 S----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAG- 176
Query: 217 HGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRKFQN-NKDDRTNSLTIGVADEH 267
G Y A+P P H A +H+ G F + +T S + + ++
Sbjct: 177 -GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGLDASAQTTSHELTIPNDL 235
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 236 IGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 288
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 71 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 128
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 129 IAGIPQSIIECVKQICVVMLETL 151
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 219 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 275
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 276 GSAASISLAQYLI 288
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 4 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 58
Query: 326 KV 327
K+
Sbjct: 59 KL 60
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 150/313 (47%), Gaps = 42/313 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ D + R
Sbjct: 25 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG-----SCPERITTITGSTDAVFR 79
Query: 97 AVDLVIDKLLTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
AV ++ KL +L A VG + LRL++P S CGS+IGKAGA I+ + + A +
Sbjct: 80 AVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQV 139
Query: 156 KIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPYTYA- 209
+++ L +S +R VT++G T+ +R + ++L++ ++ P+ +
Sbjct: 140 QVAGDLLPNS----TERAVTVSGVPDTIIHCVRQICAVILEVPTESPTQAWGAFPHQHGY 195
Query: 210 ---GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG-GRKFQNNKDDRTNSLTIG--- 262
+ S P PP PAV H+ P M + SL++
Sbjct: 196 LPPKMTLSLISWSPCTHQSPPNPAV----GKHWHPIMTDAYSYWRPTTPLLTSLSLPPGL 251
Query: 263 ------------VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
V ++ IG ++GR G I EI Q+SGA IK+ G+ G+SER VTI+
Sbjct: 252 DTSSQNSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKI---GNQTEGSSERHVTIT 308
Query: 311 GPQRSIRTAESMI 323
G SI A+ +I
Sbjct: 309 GSPVSITVAQYLI 321
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 105 PVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQV--AGDLLPNSTERAVTVSGVPDT 162
Query: 94 ILRAVDLVIDKLL 106
I+ V + +L
Sbjct: 163 IIHCVRQICAVIL 175
>gi|197127216|gb|ACH43714.1| putative neuro-oncological ventral antigen 1-like protein
[Taeniopygia guttata]
Length = 220
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 107/173 (61%), Gaps = 16/173 (9%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 168
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 169 TVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQED 220
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 110
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG-AVPPPVPAVPHNTAAHYGPN 242
A+ G MP A PV + T +
Sbjct: 111 AVH-----------------------GFIAEKIREMPQNVAKTEPVSILQPQTTVN---- 143
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + I V + G ++G+GG + I + SGA +++S + D +
Sbjct: 144 ----------PDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGIN-L 192
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 193 QERVVTVSGEPEQNRKAVELIIQKI 217
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTVEALNAVHGFIAEKI 120
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 22/236 (9%)
Query: 6 SSYVPSPDVHGKRSTAPVK-----SLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTIND 59
S + P P R P S+S TE+ Y ++ L+ + AG++IGKGG TI
Sbjct: 113 SQFFPGPIGDPPRPCHPAHGRSPGSVSPPKTEEGEYFLKVLIPSYAAGSIIGKGGQTIVQ 172
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL-HAEDQADDV 118
Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L AV I + + E+ A + + V
Sbjct: 173 LQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EALNAVHSFIAEKVREIPQAMTKPEVV 231
Query: 119 GT-----------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL 167
+ +LIVPNS+ G IIGK GAT+K+ M+ S A +++S+ L
Sbjct: 232 NILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG-INL 290
Query: 168 NDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT-YAG-VFFSGFHGMPY 221
+R+VT++G ++ +A+ I+ K+ ED S + + Y AG V S G PY
Sbjct: 291 QERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPY 346
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 526 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 585
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 586 YLISQRVTY 594
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 150 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 209
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 210 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 240
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 241 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 291
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 292 ERVVTVSGEPEQVHKAVSAIVQKV 315
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 524 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 583
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 584 AQYLISQRVTYE 595
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 510 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 568
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 569 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 596
>gi|358335626|dbj|GAA29562.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 673
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 108/181 (59%), Gaps = 7/181 (3%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E + + LV + AGA+IGKGG I D Q+++ A++++S++++F+PGTT+R+ +I GTI
Sbjct: 25 EGNVHFKILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTI 84
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
D ILR + +K+ + + ++ + G + +++++VPNS+ G IIGK G+ IK
Sbjct: 85 DSILRVFQYISEKIYEKPESILRSTNKGGRMPAERHKQVKILVPNSTAGIIIGKGGSFIK 144
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+ + I++S+ L +R VT+ G L + A++ +L K+++D S +
Sbjct: 145 EVKESTGVFIQVSQKSKE-LNLAERCVTVAGELPQTFEAVKQLLFKIADDPQSSSCPNIS 203
Query: 206 Y 206
Y
Sbjct: 204 Y 204
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS-RSHEFFPGTTDRIIMIS 88
P E+ ++ LV N AG +IGKGGS I + + +G IQ+S +S E +R + ++
Sbjct: 116 PAERHKQVKILVPNSTAGIIIGKGGSFIKEVKESTGVFIQVSQKSKEL--NLAERCVTVA 173
Query: 89 GTIDEILRAVDLVIDKL 105
G + + AV ++ K+
Sbjct: 174 GELPQTFEAVKQLLFKI 190
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I +I + A++K+S DF+ GT+ER I G SI I +K+
Sbjct: 40 GAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTIDSILRVFQYISEKI 98
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 163/352 (46%), Gaps = 51/352 (14%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S AP+K DP+ T IR ++ G++IGK G +N F+ +SGA+I +S
Sbjct: 11 SGAPIKL--EDPSVTLT-IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS---- 63
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCG 134
+RI+ +SGT + I A L+ K Q +DVG T+ +RLIVP S CG
Sbjct: 64 -CPERIVTVSGTTNAIFSAFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCG 119
Query: 135 SIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
S+IGK+G+ IK + I+++ L +S +R VTL+G+ ++ + + I L +
Sbjct: 120 SLIGKSGSKIKEIRQTTGCSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVM 175
Query: 193 SEDTLYSQTMTVPY------TYAGVFFSGFHGMPYGAVPPPVPAVPHN------------ 234
E + T+PY T + +G G P V N
Sbjct: 176 LESP--PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAG 233
Query: 235 -TAAHYG-------PNMGGRKFQNNKDDRTNSLT--IGVADEHIGFVVGRGGRNIMEISQ 284
T A G + G + + +R + V+++ IG ++G+GG I EI Q
Sbjct: 234 MTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQ 293
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
ISGA I++S+ + G ++R +TISG S+ A+ +I V L D
Sbjct: 294 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANLQD 345
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A L
Sbjct: 272 VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYL 331
Query: 101 V-IDKLLTELHAEDQA 115
+ + L + + +DQA
Sbjct: 332 INMSVELQKANLQDQA 347
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 114/201 (56%), Gaps = 14/201 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT + +
Sbjct: 118 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 177
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATI 144
A + +K+ A + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 178 AAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 237
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S + +
Sbjct: 238 KAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNI 296
Query: 205 PYT-YAG-VFFSGFHGMPYGA 223
Y AG V S G PY +
Sbjct: 297 SYANVAGPVANSNPTGSPYAS 317
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 495 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 554
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 555 YLISQRVTY 563
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 119 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 178
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A I K+ E Q MT P + P T
Sbjct: 179 AHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 209
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 210 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 260
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 261 ERVVTVSGEPEQVHKAVSAIVQKV 284
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 493 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 546
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 479 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 537
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 538 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 565
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 139 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 197
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 198 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 257
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 258 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 316
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 317 ISYANVAGPVANSNPTGSPYAS 338
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 49/71 (69%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + +
Sbjct: 514 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 573
Query: 319 AESMIMQKVAY 329
A+ +I Q+V Y
Sbjct: 574 AQYLISQRVTY 584
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 140 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 199
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 200 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 230
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 231 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 281
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 282 ERVVTVSGEPEQVHKAVSAIVQKV 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 514 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 573
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 574 AQYLISQRVTYE 585
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 229 PAVPHNTAAHY---GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQI 285
P +PH + GPN+ Q ++ L + + G ++G+GG+ I+++ +
Sbjct: 112 PQLPHTSVERTDTSGPNL-----QIRAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKE 166
Query: 286 SGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+GA IK+S DF+ GT+ER + G ++ S I +KV
Sbjct: 167 TGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKV 208
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 500 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 558
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 559 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 586
>gi|196016215|ref|XP_002117961.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
gi|190579434|gb|EDV19529.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
Length = 364
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 149/315 (47%), Gaps = 47/315 (14%)
Query: 40 LVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVD 99
LV AG +IGKGG+ I F+ QS ARI +S +RI+ ++G ID + +A
Sbjct: 51 LVEQKEAGRIIGKGGAKIKSFREQSTARINISDG-----SLPERIVTVNGPIDAVCKAFK 105
Query: 100 LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
L+ KL + + + K L++P C SIIGK G T+K + + A + I+
Sbjct: 106 LICQKLDEDFRIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGAQVSIAS 165
Query: 160 --LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL-------------------Y 198
L +S +DR++T+TG+ + ++ + LSE L
Sbjct: 166 NVLPNS----SDRVMTITGSSSAISKCIQRLSQLLSELPLGQHVPYQPKPPNVPPTAFQN 221
Query: 199 SQTMTVPYTYAGVFFSGFHG-MPYGAVPPPVPAVPHNTAAHYG---PNMGGRKFQNNKDD 254
Q + + G F H +PYG PPVP + A Y P++ + F +
Sbjct: 222 GQVHELTFAVPGPFPIPPHAQLPYG---PPVPVI--TQIAPYSVDIPSIVTQNFSAMSNG 276
Query: 255 RT---NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV-SDRGDFFSGTSERKVTIS 310
T ++ + + + IG ++GRGG I EI QISGA IK+ S GD T+ R+VTIS
Sbjct: 277 GTFARSTQLLKIPHDLIGCIIGRGGVKINEIRQISGANIKIASPNGD----TTGRQVTIS 332
Query: 311 GPQRSIRTAESMIMQ 325
G SI A+ +I Q
Sbjct: 333 GTPESISAAQYLISQ 347
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 57/208 (27%)
Query: 110 HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
HA D+ T + +V G IIGK GA IKSF + S A I IS D S L +
Sbjct: 34 HAFDRNSTGNTCFIDKGLVEQKEAGRIIGKGGAKIKSFREQSTARINIS--DGS---LPE 88
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVP 229
R+VT+ G +D +A +LI KL ED
Sbjct: 89 RIVTVNGPIDAVCKAFKLICQKLDEDF--------------------------------- 115
Query: 230 AVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
R N +K + T + + H ++G+GG + EI + +GA
Sbjct: 116 ----------------RIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGA 159
Query: 289 RIKVSDRGDFFSGTSERKVTISGPQRSI 316
++ ++ + +S+R +TI+G +I
Sbjct: 160 QVSIAS--NVLPNSSDRVMTITGSSSAI 185
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+PT K L+ P ++IGKGG T+ + + +GA Q+S + P ++DR+
Sbjct: 121 SSKSEPTIK---FDLLIPVPHCRSIIGKGGGTVKEIRESTGA--QVSIASNVLPNSSDRV 175
Query: 85 IMISGTIDEILRAVDLVIDKLLTEL 109
+ I+G+ I + + + +LL+EL
Sbjct: 176 MTITGSSSAISKCIQR-LSQLLSEL 199
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 248 FQNNKDDRTNSLTIGVADE-HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERK 306
F N T + G+ ++ G ++G+GG I + S ARI +SD ER
Sbjct: 36 FDRNSTGNTCFIDKGLVEQKEAGRIIGKGGAKIKSFREQSTARINISD-----GSLPERI 90
Query: 307 VTISGPQRSIRTAESMIMQKV 327
VT++GP ++ A +I QK+
Sbjct: 91 VTVNGPIDAVCKAFKLICQKL 111
>gi|357602329|gb|EHJ63352.1| hypothetical protein KGM_14186 [Danaus plexippus]
Length = 546
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 115/203 (56%), Gaps = 12/203 (5%)
Query: 33 KPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
+PTY + LV + +AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R +I+G++
Sbjct: 63 EPTYHFKVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGSV 122
Query: 92 DEILRAVDLVIDKL-----LTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+ I+ +D +++K+ L + E D +++++VPNS+ G IIGK G I
Sbjct: 123 EGIMVVLDFIMEKIKEKPELVKPFPEGVDAKMPQDRDKQVKILVPNSTAGMIIGKGGNYI 182
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K + S + ++IS+ L +R +T+ G + +A +IL K+ +D V
Sbjct: 183 KQIKEQSGSYVQISQ-KAKELSLQERCITVVGEKENNKKACLMILQKVVDDPQSGSCPNV 241
Query: 205 PYTYAGVFFSGFH--GMPYGAVP 225
Y + ++ G PY AVP
Sbjct: 242 SYADVAGPVANYNPTGSPY-AVP 263
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 42/204 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+++VP+ G+IIGK G TI D+ A +K+S+ Y G +R +TG+++ M
Sbjct: 68 FKVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGSVEGIMV 127
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
L+ I+ K+ E P V P A
Sbjct: 128 VLDFIMEKIKEK-----------------------------PELVKPFPEGVDAKM---- 154
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + I V + G ++G+GG I +I + SG+ +++S + S
Sbjct: 155 --------PQDRDKQVKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELS-LQ 205
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +T+ G + + + A MI+QKV
Sbjct: 206 ERCITVVGEKENNKKACLMILQKV 229
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S + + + +G ++G GGR+++EI Q+SGA I++S +G F GT R VTISG +I
Sbjct: 458 DSKNVEIPEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGTATAI 517
Query: 317 RTAESMIMQKV 327
A +I QK+
Sbjct: 518 SNAHYLIEQKI 528
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G GG ++ + Q SGA IQ+S+ F PGT +RI+ ISGT I A L+ K
Sbjct: 468 IVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGTATAISNAHYLIEQK 527
Query: 105 LLTE 108
+ E
Sbjct: 528 IQEE 531
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D G K + +P G+I+G G ++ S A I+IS+ G +R+VT++G
Sbjct: 453 DAGAKDSKNVEIPEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISG 512
Query: 177 TLDEQMRALELILLKLSEDTL 197
T A LI K+ E+ L
Sbjct: 513 TATAISNAHYLIEQKIQEEEL 533
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 40 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 98
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 99 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 158
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 159 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 217
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 218 ISYANVAGPVANSNPTGSPYAS 239
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 417 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 476
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 477 YLISQRVTY 485
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 41 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 100
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 101 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 131
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 132 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 182
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 183 ERVVTVSGEPEQVHKAVSAIVQKV 206
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 415 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 468
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 23 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 82
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 83 GTTERVCLVQGTAEALNAVHSFIAEKV 109
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 401 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 459
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 460 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 487
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 411 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 470
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 471 YLISQRVTY 479
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 95 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 125
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 126 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 176
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKV 200
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 17 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 77 GTTERVCLVQGTAEALNAVHSFIAEKV 103
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 454 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 481
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 411 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 470
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 471 YLISQRVTY 479
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 95 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 125
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 126 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 176
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKV 200
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 17 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 77 GTTERVCLVQGTAEALNAVHSFIAEKV 103
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 454 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 481
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 29 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 87
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 88 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 147
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 148 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 206
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 207 ISYANVAGPVANSNPTGSPYAS 228
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 406 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 465
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 466 YLISQRVTY 474
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 30 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 89
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 90 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 120
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 121 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 171
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 172 ERVVTVSGEPEQVHKAVSAIVQKV 195
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 404 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 457
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 12 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 71
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 72 GTTERVCLVQGTAEALNAVHSFIAEKV 98
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 390 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 448
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 449 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 476
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 411 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 470
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 471 YLISQRVTY 479
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 95 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 125
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 126 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 176
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKV 200
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 17 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 77 GTTERVCLVQGTAEALNAVHSFIAEKV 103
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 454 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 481
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 411 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 470
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 471 YLISQRVTY 479
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 95 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 125
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 126 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 176
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKV 200
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 17 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 77 GTTERVCLVQGTAEALNAVHSFIAEKV 103
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 454 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 481
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 411 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 470
Query: 321 SMIMQKVAY 329
+I Q+V+Y
Sbjct: 471 YLISQRVSY 479
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 95 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 125
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 126 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 176
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKV 200
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 17 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 77 GTTERVCLVQGTAEALNAVHSFIAEKV 103
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TG+ A LI ++S
Sbjct: 454 NRRVTITGSPAATQAAQYLISQRVS 478
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 98 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 156
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 157 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 216
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 217 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 275
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 276 ISYANVAGPVANSNPTGSPYAS 297
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 475 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 534
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 535 YLISQRVTY 543
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 99 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 158
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 159 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 189
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 190 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 240
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 241 ERVVTVSGEPEQVHKAVSAIVQKV 264
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 473 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 526
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 81 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 140
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 141 GTTERVCLVQGTAEALNAVHSFIAEKV 167
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 459 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 517
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 518 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 545
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 115/200 (57%), Gaps = 16/200 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 125 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 183
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 184 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 243
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 244 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 302
Query: 204 VPYT-YAG-VFFSGFHGMPY 221
+ Y AG V S G PY
Sbjct: 303 ISYANVAGPVANSNPTGSPY 322
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 502 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 561
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 562 YLISQRVTY 570
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 126 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 185
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 186 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 216
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 217 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 267
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 268 ERVVTVSGEPEQVHKAVSAIVQKV 291
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 500 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 553
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 486 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 544
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 545 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 572
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 131 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 189
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 190 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 249
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 250 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 308
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 309 ISYANVAGPVANSNPTGSPYAS 330
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 132 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 191
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 192 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 222
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 223 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 273
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 274 ERVVTVSGEPEQVHKAVSAIVQKV 297
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 47/67 (70%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 508 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPTNTQAAQ 567
Query: 321 SMIMQKV 327
+I Q+V
Sbjct: 568 YLISQRV 574
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 506 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPTNTQA 565
Query: 97 AVDLVIDKLLTEL 109
A L+ ++ L
Sbjct: 566 AQYLISQRVFQTL 578
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 492 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 550
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
+R VT+TG+ A LI ++ + L+S +
Sbjct: 551 NRRVTITGSPTNTQAAQYLISQRVFQTLLFSMAL 584
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 156/306 (50%), Gaps = 35/306 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYG-PNMGGRKFQNNKD--DRTN 257
+ V F+G G Y A+P P H A +H+ + G F D +
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQAT 242
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI
Sbjct: 243 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSNDRQVTITGSTASIS 299
Query: 318 TAESMI 323
A+ +I
Sbjct: 300 LAQYLI 305
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 64/228 (28%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+G I+ V + +
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD 207
Query: 106 LTELH--AEDQA----------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEI 267
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G NDR VT+TG+ A LI ++LS +
Sbjct: 268 RQMSGAQIKIA---NPVEGSNDRQVTITGSTASISLAQYLINVRLSSE 312
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A SMI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFSMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 6 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 64
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 65 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 124
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 125 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 183
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 184 ISYANVAGPVANSNPTGSPYAS 205
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 383 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 442
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 443 YLISQRVTY 451
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 67 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 97
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 98 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 148
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 149 ERVVTVSGEPEQVHKAVSAIVQKV 172
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 381 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 434
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 367 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 425
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 426 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 453
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 165/350 (47%), Gaps = 51/350 (14%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S AP+K DP+ T IR ++ G++IGK G +N F+ +SGA+I +S
Sbjct: 11 SGAPIKL--EDPSVTLT-IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS---- 63
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCG 134
+RI+ +SGT + I A L+ K Q +DVG T+ +RLIVP S CG
Sbjct: 64 -CPERIVTVSGTTNAIFSAFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCG 119
Query: 135 SIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
S+IGK+G+ IK + I+++ L +S +R VTL+G+ ++ + + I L +
Sbjct: 120 SLIGKSGSKIKEIRQTTGCSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVM 175
Query: 193 SEDTLYSQTMTVPY------TYAGVFFSGFHGMPYGAVPPPVPAVPHN------------ 234
E + T+PY T + +G G P V N
Sbjct: 176 LESP--PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAG 233
Query: 235 -TAAHYG-------PNMGGRKFQNNKDDRTNSLT--IGVADEHIGFVVGRGGRNIMEISQ 284
T A G + G + + +R + V+++ IG ++G+GG I EI Q
Sbjct: 234 MTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQ 293
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
ISGA I++S+ + G ++R +TISG S+ A+ +I +++ + L
Sbjct: 294 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 343
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 269 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 328
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGM-PYGAVPPPV 228
LI +++S +T AG+ G+H + P V P+
Sbjct: 329 QYLINMRISMET------------AGLPIPGYHYIAPSAIVKTPI 361
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 156/328 (47%), Gaps = 57/328 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S +RI+ I+G D I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-----SCPERIVTITGPTDAIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++A V +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 134 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 187
Query: 209 AGVFFSGFH-----------GMPYGAVPPPVP--------AVP-------HNTAAHYGP- 241
A + F+G A P P P A+P H A + P
Sbjct: 188 APIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPPF 247
Query: 242 ------NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
G ++ LTI ++ IG ++GR G I EI Q+SGA+IK+++
Sbjct: 248 TPLGQTTPGFPGLDATSPTSSHELTI--PNDLIGCIIGRQGSKINEIRQMSGAQIKIANA 305
Query: 296 GDFFSGTSERKVTISGPQRSIRTAESMI 323
+ G++ER+VTI+G +I A+ +I
Sbjct: 306 TE---GSAERQVTITGSPANISLAQYLI 330
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R +
Sbjct: 93 SSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVT 150
Query: 87 ISGTIDEILRAVDLVIDKLL 106
ISGT D I++ V + +L
Sbjct: 151 ISGTPDAIIQCVKQICVVML 170
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ GS IN+ + SGA+I+++ + E G+ +R + I+G+ I A
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE---GSAERQVTITGSPANISLA 326
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRL 126
+I+ L Q V T L +
Sbjct: 327 -QYLINASLEMAKVSTQTASVTTPVDLNM 354
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A SMI
Sbjct: 26 KEVGSIIGKKGETVKKMREESGARINISE-----GSCPERIVTITGPTDAIFKAFSMIAL 80
Query: 326 K 326
K
Sbjct: 81 K 81
>gi|326511423|dbj|BAJ87725.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 329
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 147/318 (46%), Gaps = 45/318 (14%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+PT+ R LVS+ AG + G+ GS ++ + SGA I++S P T R++ +SG
Sbjct: 27 ERPTHARILVSDADAGCIYGRAGSAVHAMDAGSGANIKISAGGRPLPATDRRVVFVSGLF 86
Query: 92 DEILRAVDLVIDKLLTELHAEDQA------------DDVGTKTKLRLIVPNSSC---GSI 136
++ A DLV+ KL + DQ DD L +++PN +
Sbjct: 87 PAVMDAADLVLQKLF---YLGDQVIDADATVVLVVPDDSYNLHSLPVLMPNIDVLQMNCM 143
Query: 137 IGKAGAT------IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILL 190
+ +T SF ++S I +S YG +DRLVT+TG LD Q++A+ LI+
Sbjct: 144 VYALHSTKGPRERAMSFAEESNTRIMVSPY-AICYGFHDRLVTITGHLDNQLQAIFLIVS 202
Query: 191 KLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQN 250
+L +D YS + A F GAV H + H P+ R ++
Sbjct: 203 ELLDDVRYSSST------ACFSFPSSSIRRGGAVQD-----EHVESYHSSPDTPVRS-RD 250
Query: 251 NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--------GDFFSGT 302
D +LT+GV DE++G V+G GGR I EI Q +G +I ++ D
Sbjct: 251 YDSDVQGTLTMGVLDEYVGTVIGCGGRTINEIEQATGVQINTPNQDPEGGTHSWDERECM 310
Query: 303 SERKVTISGPQRSIRTAE 320
R+V I+G ++ AE
Sbjct: 311 WWREVVITGKWEAVDAAE 328
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 225 PPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
PPP +TA+ G + + Q+ +R I V+D G + GR G + +
Sbjct: 6 PPPT-----STASQDGDD---DRHQDVMWERPTHARILVSDADAGCIYGRAGSAVHAMDA 57
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
SGA IK+S G T R V +SG ++ A +++QK+ Y D+++D
Sbjct: 58 GSGANIKISAGGRPLPATDRRVVFVSGLFPAVMDAADLVLQKLFYLGDQVID 109
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 153/299 (51%), Gaps = 35/299 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 58 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 112
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 113 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 172
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 173 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 226
Query: 209 AGVFFSGFHGMPY---GAVPPPVPAVPH-NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
V F+G G Y G A+PH + + H+ + T+ LTI
Sbjct: 227 TPVIFAG--GQAYTIQGQY-----AIPHPDVSFHFVCLPFSSCLDASPPASTHELTI--P 277
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 278 NDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 333
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 52/220 (23%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 126 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 183
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTE------------------LHAEDQADDVGTKT 122
T+R + ISGT D I++ V + +L + A QA + +
Sbjct: 184 TERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQY 243
Query: 123 KL---------------------------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+ L +PN G IIG+ G I S A I
Sbjct: 244 AIPHPDVSFHFVCLPFSSCLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 303
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
KI+ ++ G ++R +T+TGT A LI +L+ +
Sbjct: 304 KIA---NATEGSSERQITITGTPANISLAQYLINARLTSE 340
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
H+ H+G M K + T ++ + + + +G ++G+ G + ++ + SGARI +
Sbjct: 33 HHLQTHFGRKME-SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 91
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
S+ ER VTI+GP +I A +MI K
Sbjct: 92 SE-----GNCPERIVTITGPTDAIFKAFAMIAYK 120
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 160 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 218
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 219 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 278
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 279 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 337
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 338 ISYANVAGPVANSNPTGSPYAS 359
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 537 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 596
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 597 YLISQRVTY 605
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 161 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 220
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 221 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 251
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 252 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 302
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 303 ERVVTVSGEPEQVHKAVSAIVQKV 326
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 535 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 588
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 521 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 579
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 580 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 607
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 157/336 (46%), Gaps = 50/336 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K Q +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM-------- 202
I+++ L +S +R VTL+G+ ++ + + I L + E T+
Sbjct: 138 CSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 203 TVPYTYA-GVFFS--GFHGMPYGAV-----------------PPPVPAVPHNT--AAHYG 240
T P A G F+ G + +P V P + H AA G
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAG 253
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+ N + + +T V+++ IG ++G+GG I EI QISGA I++S+ +
Sbjct: 254 SQLRTANPANRAQQQQHEMT--VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREG 311
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
G ++R +TISG S+ A+ +I V L++
Sbjct: 312 GNTDRTITISGNPDSVALAQYLINMSVELQKANLLE 347
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 5 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 63
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 64 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 123
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 124 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 182
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 183 ISYANVAGPVANSNPTGSPYAS 204
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 6 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 65
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 66 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 96
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 97 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 147
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 148 ERVVTVSGEPEQVHKAVSAIVQKV 171
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 68 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 126
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 127 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 186
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 187 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 245
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 246 ISYANVAGPVANSNPTGSPYAS 267
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 69 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 128
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 129 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 159
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 160 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 210
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 211 ERVVTVSGEPEQVHKAVSAIVQKV 234
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 151/300 (50%), Gaps = 29/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
++++ L +S +R VT++GT D ++ ++ I + + E +P+
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPD---- 214
Query: 213 FSGFHGMPYGAVP-PPV----PAVPHNT----AAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
+ H + P PP+ PA P ++ N+ G+ + ++ + +
Sbjct: 215 LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI 274
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 275 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 331
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 60/228 (26%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL----------------LTELH-------------- 110
T+R + ISGT D I++ V + + LT+LH
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQ 233
Query: 111 --------------AEDQADDVGTKTKL---------RLIVPNSSCGSIIGKAGATIKSF 147
+E+ + +G + L L +PN G IIG+ G I
Sbjct: 234 TNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 293
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ ++ G ++R +T+TGT A LI +L+ +
Sbjct: 294 RQMSGAQIKIA---NATEGSSERQITITGTPANISLAQYLINARLTSE 338
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 156/328 (47%), Gaps = 57/328 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S +RI+ I+G D I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-----SCPERIVTITGPTDAIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++A V +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 134 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 187
Query: 209 AGVFFSGFH-----------GMPYGAVPPPVP--------AVP-------HNTAAHYGP- 241
A + F+G A P P P A+P H A + P
Sbjct: 188 APIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPPF 247
Query: 242 ------NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
G ++ LTI ++ IG ++GR G I EI Q+SGA+IK+++
Sbjct: 248 TPLGQTTPGFPGLDATSPTSSHELTI--PNDLIGCIIGRQGSKINEIRQMSGAQIKIANA 305
Query: 296 GDFFSGTSERKVTISGPQRSIRTAESMI 323
+ G++ER+VTI+G +I A+ +I
Sbjct: 306 TE---GSAERQVTITGSPANISLAQYLI 330
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V + +L
Sbjct: 155 PDAIIQCVKQICVVML 170
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ GS IN+ + SGA+I+++ + E G+ +R + I+G+ I A
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE---GSAERQVTITGSPANISLA 326
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRL 126
+I+ L Q V T L +
Sbjct: 327 -QYLINASLEMAKVSTQTASVTTPVDLNM 354
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A SMI
Sbjct: 26 KEVGSIIGKKGETVKKMREESGARINISE-----GSCPERIVTITGPTDAIFKAFSMIAL 80
Query: 326 K 326
K
Sbjct: 81 K 81
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 182 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 240
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 241 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 300
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 301 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 359
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 360 ISYANVAGPVANSNPTGSPYAS 381
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 559 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 618
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 619 YLISQRVTY 627
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 183 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 242
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 243 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 273
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 274 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 324
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 325 ERVVTVSGEPEQVHKAVSAIVQKV 348
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 557 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 616
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 617 AQYLISQRVTYE 628
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 543 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 601
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 602 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 629
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 158/334 (47%), Gaps = 50/334 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K Q +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM-------- 202
I+++ L +S +R VTL+G+ ++ + + I L + E T+
Sbjct: 138 CSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 203 TVPYTYA-GVFFS--GFHGMPYGAV-----------------PPPVPAVPHNT--AAHYG 240
T P A G F+ G + +P V P + H AA G
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAG 253
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+ N + + +T V+++ IG ++G+GG I EI QISGA I++S+ +
Sbjct: 254 SQLRTANPANRAQQQQHEMT--VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREG 311
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
G ++R +TISG S+ A+ +I +++ + L
Sbjct: 312 GNTDRTITISGNPDSVALAQYLINMRISMETAGL 345
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 271 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 330
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGM-PYGAVPPPV 228
LI +++S +T AG+ G+H + P V P+
Sbjct: 331 QYLINMRISMET------------AGLPIPGYHYIAPSAIVKTPI 363
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 153/308 (49%), Gaps = 39/308 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ + +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP----NMGGRKFQNNKD----DR 255
V F+G G Y A+P P H A P F D
Sbjct: 185 TPVIFAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPAGLDASPPAS 242
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
T+ LTI ++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G +
Sbjct: 243 THELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPAN 297
Query: 316 IRTAESMI 323
I A+ +I
Sbjct: 298 ISLAQYLI 305
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 ISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 245 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 301
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 302 QYLINARLTSEV 313
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 151/300 (50%), Gaps = 29/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
++++ L +S +R VT++GT D ++ ++ I + + E +P+
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPD---- 214
Query: 213 FSGFHGMPYGAVP-PPV----PAVPHNT----AAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
+ H + P PP+ PA P ++ N+ G+ + ++ + +
Sbjct: 215 LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI 274
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 275 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 331
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 60/228 (26%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL----------------LTELH-------------- 110
T+R + ISGT D I++ V + + LT+LH
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQ 233
Query: 111 --------------AEDQADDVGTKTKL---------RLIVPNSSCGSIIGKAGATIKSF 147
+E+ + +G + L L +PN G IIG+ G I
Sbjct: 234 TNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 293
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ ++ G ++R +T+TGT A LI +L+ +
Sbjct: 294 RQMSGAQIKIA---NATEGSSERQITITGTPANISLAQYLINARLTSE 338
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 219 MPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRN 278
+P+GA+ + H+ H+G M K + T ++ + + + +G ++G+ G
Sbjct: 13 LPHGALG----TLSHHPQLHFGRKME-SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGET 67
Query: 279 IMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ ++ + SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 68 VKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|118137284|pdb|2ANR|A Chain A, Crystal Structure (Ii) Of Nova-1 Kh1KH2 DOMAIN TANDEM WITH
25NT RNA Hairpin
Length = 178
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 103/171 (60%), Gaps = 12/171 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI+ +
Sbjct: 7 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALN 66
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATI 144
+ +K+ + + V ++++IVPNS+ G IIGK GAT+
Sbjct: 67 AVHGFIAEKIREXPQNVAKTEPVSILQPQTTVNPDRANQVKIIVPNSTAGLIIGKGGATV 126
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
K+ + S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 127 KAIXEQSGAWVQLSQKPDG-INLQNRVVTVSGEPEQNRKAVELIIQKIQED 176
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 38/210 (18%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+G++ L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT
Sbjct: 2 LGSQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 61
Query: 178 LDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
++ + HG + + P N A
Sbjct: 62 IEA--------------------------------LNAVHGF----IAEKIREXPQNVAK 85
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD 297
++ + N DR N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 86 TEPVSILQPQTTVN-PDRANQVKIIVPNSTAGLIIGKGGATVKAIXEQSGAWVQLSQKPD 144
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ R VT+SG R A +I+QK+
Sbjct: 145 GIN-LQNRVVTVSGEPEQNRKAVELIIQKI 173
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 151/300 (50%), Gaps = 29/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
++++ L +S +R VT++GT D ++ ++ I + + E +P+
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPD---- 182
Query: 213 FSGFHGMPYGAVP-PPV----PAVPHNT----AAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
+ H + P PP+ PA P ++ N+ G+ + ++ + +
Sbjct: 183 LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI 242
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 243 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 299
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 60/228 (26%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL----------------LTELH-------------- 110
T+R + ISGT D I++ V + + LT+LH
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQ 201
Query: 111 --------------AEDQADDVGTKTKL---------RLIVPNSSCGSIIGKAGATIKSF 147
+E+ + +G + L L +PN G IIG+ G I
Sbjct: 202 TNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 261
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ ++ G ++R +T+TGT A LI +L+ +
Sbjct: 262 RQMSGAQIKIA---NATEGSSERQITITGTPANISLAQYLINARLTSE 306
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 159/326 (48%), Gaps = 50/326 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRKFQ--------- 249
+ + V F+G G Y A+P P H A +H+ G F
Sbjct: 187 SSSPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEV 244
Query: 250 -------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
+ T+ LTI + IG ++GR G NI EI Q+SGA+IK+++ G+
Sbjct: 245 KGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINEIRQMSGAQIKIANP---VEGS 299
Query: 303 SERKVTISGPQRSIRTAESMIMQKVA 328
S R+VTI+G SI A+ +I +++
Sbjct: 300 SGRQVTITGSAASISLAQYLINARLS 325
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 158/320 (49%), Gaps = 47/320 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHY---------------GPNM 243
+ + V F+G G Y A+P P H A +H+ P +
Sbjct: 187 SSSPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEV 244
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
G + +T S + + ++ IG ++GR G I EI Q+SGA+IK+++ G++
Sbjct: 245 KGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGST 301
Query: 304 ERKVTISGPQRSIRTAESMI 323
+R+VTI+G SI A+ +I
Sbjct: 302 DRQVTITGSAASISLAQYLI 321
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 252 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 308
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 309 GSAASISLAQYLINVRLSSE 328
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 252 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 308
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 309 GSAASISLAQYLINVRLSSET 329
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 161/341 (47%), Gaps = 59/341 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGTIDEIL 95
IR L+ G++IGK G T+ + +SGARI +S GT +RI+ I+G D I
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISE------GTCPERIVTITGPTDAIF 72
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A ++ K +++A V +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 KAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 132
Query: 154 VIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----T 207
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 133 QVQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPA 186
Query: 208 YAGVFFSGFH-----------GMPYGAVPPPVP--------AVP-------HNTAAHYGP 241
A + F+G A P P P A+P H A + P
Sbjct: 187 SAPIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPP 246
Query: 242 -------NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD 294
G ++ LTI ++ IG ++GR G I EI Q+SGA+IK+++
Sbjct: 247 FTPLGQTTPGFPGLDATTPTSSHELTI--PNDLIGCIIGRQGSKINEIRQMSGAQIKIAN 304
Query: 295 RGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLM 335
+ G++ER+VTI+G +I A+ +I + + +
Sbjct: 305 ATE---GSAERQVTITGSPANISLAQYLINASIYFLKSECL 342
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R +
Sbjct: 93 SSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVT 150
Query: 87 ISGTIDEILRAVDLVIDKLL 106
ISGT D I++ V + +L
Sbjct: 151 ISGTPDAIIQCVKQICVVML 170
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 157/318 (49%), Gaps = 47/318 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHY---------------GPNMGG 245
+ V F+G G Y A+P P H A +H+ P + G
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKG 242
Query: 246 RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+ +T S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R
Sbjct: 243 YWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDR 299
Query: 306 KVTISGPQRSIRTAESMI 323
+VTI+G SI A+ +I
Sbjct: 300 QVTITGSAASISLAQYLI 317
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 305 GSAASISLAQYLINVRLSSE 324
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 304
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 305 GSAASISLAQYLINVRLSSET 325
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 164/350 (46%), Gaps = 54/350 (15%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP+K DP+ T IR ++ G++IGK G +N F+ +SGA+I +S
Sbjct: 13 APIKH--EDPSVTLT-IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----C 64
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSI 136
+RI+ +SGT I A L+ K Q +DVG T+ +RLIVP S CGS+
Sbjct: 65 PERIVTVSGTTSAIFSAFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSL 121
Query: 137 IGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IGK+G+ IK + I+++ L +S +R VTL+G+ ++ + + I L + E
Sbjct: 122 IGKSGSKIKEIRQTTGCSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVMLE 177
Query: 195 DTLYSQTM--------TVPYTYA-GVFFS--GFHGMPYGAV-----------------PP 226
T+ T P A G F+ G + +P V P
Sbjct: 178 SPPRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPA 237
Query: 227 PVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLT--IGVADEHIGFVVGRGGRNIMEISQ 284
+ H A + G + + +R + V+++ IG ++G+GG I EI Q
Sbjct: 238 STGGINHTAALAA---LAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQ 294
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
ISGA I++S+ + G ++R +TISG S+ A+ +I +++ + L
Sbjct: 295 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 344
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 270 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 329
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGM-PYGAVPPPV 228
LI +++S +T AG+ G+H + P V P+
Sbjct: 330 QYLINMRISMET------------AGLPIPGYHYIAPSAIVKTPI 362
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 157/318 (49%), Gaps = 47/318 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRKFQN---------- 250
+ V F+G G Y A+P P H A +H+ + G F
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKG 242
Query: 251 -----NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+ +T S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R
Sbjct: 243 YWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDR 299
Query: 306 KVTISGPQRSIRTAESMI 323
+VTI+G SI A+ +I
Sbjct: 300 QVTITGSAASISLAQYLI 317
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 305 GSAASISLAQYLI 317
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 159/333 (47%), Gaps = 53/333 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K ++ +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKF-------EEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 133
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM-------- 202
I+++ L +S +R VTL+G+ ++ + + I L + E T+
Sbjct: 134 CSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 189
Query: 203 TVPYTYA-GVFFS--GFHGMPYGAV-----------------PPPVPAVPHNT-AAHYGP 241
T P A G F+ G + +P V P + H AA G
Sbjct: 190 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTALAALAGS 249
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
+ N + + +T V+++ IG ++G+GG I EI QISGA I++S+ + G
Sbjct: 250 QLRTANPANRAQQQQHEMT--VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG 307
Query: 302 TSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
++R +TISG S+ A+ +I +++ + L
Sbjct: 308 NTDRTITISGNPDSVALAQYLINMRISMETAGL 340
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 266 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 325
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGM-PYGAVPPPV 228
LI +++S +T AG+ G+H + P V P+
Sbjct: 326 QYLINMRISMET------------AGLPIPGYHYIAPSAIVKTPI 358
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 157/318 (49%), Gaps = 47/318 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHY---------------GPNMGG 245
+ V F+G G Y A+P P H A +H+ P + G
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKG 242
Query: 246 RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+ +T S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R
Sbjct: 243 YWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDR 299
Query: 306 KVTISGPQRSIRTAESMI 323
+VTI+G SI A+ +I
Sbjct: 300 QVTITGSAASISLAQYLI 317
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 305 GSAASISLAQYLI 317
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 47/318 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRKF----QNNKDDR- 255
+ V F+G G Y A+P P H A +H+ + G F ++ D++
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVESSSPDEKG 242
Query: 256 ----------TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
T S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R
Sbjct: 243 YWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDR 299
Query: 306 KVTISGPQRSIRTAESMI 323
+VTI+G SI A+ +I
Sbjct: 300 QVTITGSAASISLAQYLI 317
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 305 GSAASISLAQYLINVRLSSE 324
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 304
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 305 GSAASISLAQYLINVRLSSET 325
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 146/296 (49%), Gaps = 41/296 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
++++ L +S +R +T+ G + ++ I + + E YT G +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLE----------AYTIQGQY 176
Query: 213 FSGFHGMPYGAVPPPVPAVPHNTA---AHYGPNMGGRKFQNNKD--DRTNSLTIGVADEH 267
A+P P H A +H+ G F D +T S + + ++
Sbjct: 177 ----------AIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDL 226
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 227 IGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 279
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL----------------TELH--AEDQA------------- 115
I+G I+ V + +L T+LH A Q+
Sbjct: 148 IAGIPQSIIECVKQICVVMLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSA 207
Query: 116 --DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
D T L +PN G IIG+ GA I S A IKI+ + G DR VT
Sbjct: 208 GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVT 264
Query: 174 LTGTLDEQMRALELILLKLSEDT 196
+TG+ A LI ++LS +T
Sbjct: 265 ITGSAASISLAQYLINVRLSSET 287
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 149/301 (49%), Gaps = 31/301 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-------LRLIVPNSSCGSIIGKAGATIKSFMD 149
A ++ K ED + + T LRL+VP S CGS+IGK G+ IK +
Sbjct: 71 AFAMIAYKF-----EEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 150 DSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
+ A ++++ L +S +R VT++GT D ++ ++ I + + E +P+
Sbjct: 126 STGAQVQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHP 181
Query: 208 -YAGVFFSGFHGMPYGAVPPPVPAVPHNT----AAHYGPNMGGRKFQNNKDDRTNSLTIG 262
+ P+ + PA P ++ N+ G+ + ++ +
Sbjct: 182 DLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELT 241
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
+ ++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +
Sbjct: 242 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYL 298
Query: 323 I 323
I
Sbjct: 299 I 299
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 58/206 (28%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKL----------------LTELH------------------ 110
+ ISGT D I++ V + + LT+LH
Sbjct: 146 VTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFTPLGQTTPA 205
Query: 111 ----------AEDQADDVGTKTKL---------RLIVPNSSCGSIIGKAGATIKSFMDDS 151
+E+ + +G + L L +PN G IIG+ G I S
Sbjct: 206 FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 265
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGT 177
A IKI+ ++ G ++R +T+TGT
Sbjct: 266 GAQIKIA---NATEGSSERQITITGT 288
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|327289205|ref|XP_003229315.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 507
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 111/183 (60%), Gaps = 14/183 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 71 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 129
Query: 96 RAVDLVIDKLLTELHAE----DQADDVGTKTKL--------RLIVPNSSCGSIIGKAGAT 143
AV I + + E+ + + + +T + ++IVPNS+ G IIGK GAT
Sbjct: 130 NAVHNFIAEKVREIPQSVVKPESVNILQPQTTMNPDRAKQAKVIVPNSTAGLIIGKGGAT 189
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+++I+ K+ ED S +
Sbjct: 190 VKAIMEQSGAWVQLSQKPEG-INLQERVVTISGEPEQIHKAVDIIVQKIQEDPQSSSCLN 248
Query: 204 VPY 206
+ Y
Sbjct: 249 ISY 251
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G + + A+
Sbjct: 426 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGTPAATQAAQ 485
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 486 YLISQRVTY 494
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 42/206 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 72 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 131
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAV--PHNTAAHYGP 241
I K+ E +P V P + P T
Sbjct: 132 VHNFIAEKVRE------------------------IPQSVVKPESVNILQPQTTM----- 162
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
DR + V + G ++G+GG + I + SGA +++S + + +
Sbjct: 163 ----------NPDRAKQAKVIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPEGIN- 211
Query: 302 TSERKVTISGPQRSIRTAESMIMQKV 327
ER VTISG I A +I+QK+
Sbjct: 212 LQERVVTISGEPEQIHKAVDIIVQKI 237
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+GT
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGT 477
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
TK + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 420 TKDMVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGTPA 479
Query: 180 EQMRALELILLKLSEDTLYSQ 200
A LI S+ Y Q
Sbjct: 480 ATQAAQYLI----SQRVTYEQ 496
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 151/310 (48%), Gaps = 43/310 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDTIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ + I + + E + T+PY T
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVRQICVVMLESP--PKGATIPYRPKPTS 186
Query: 209 AGVFFSGFHGMPYG-----AVPPP----------VPAVPHNTAAHYGPNMGGRKFQNNKD 253
V FSG G Y A+P P + P P G +
Sbjct: 187 TPVIFSG--GQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPG--LDASPP 242
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
T+ LTI ++ IG ++GR G I EI Q+SGA+IK+++ G+SER++TI+G
Sbjct: 243 ASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANA---MEGSSERQITITGTP 297
Query: 314 RSIRTAESMI 323
+I A+ +I
Sbjct: 298 ANISLAQYLI 307
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 25 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDTIFKAFAMIAY 79
Query: 326 K 326
K
Sbjct: 80 K 80
>gi|334310485|ref|XP_001369484.2| PREDICTED: RNA-binding protein Nova-1-like [Monodelphis domestica]
Length = 731
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 115/215 (53%), Gaps = 38/215 (17%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S+P + +++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I
Sbjct: 267 SNPEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLI 326
Query: 88 SGTIDEILRAVDLVIDKLLTEL----------------------------------HAED 113
GT+ E L AV I + + E+
Sbjct: 327 QGTV-EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSS 385
Query: 114 QADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
+D + T ++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+
Sbjct: 386 PSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERV 444
Query: 172 VTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
VT++G ++ +A+ELI+ K+ ED + + Y
Sbjct: 445 VTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISY 479
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 276 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 334
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 335 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 385
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 386 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 437
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 438 IN-LQERVVTVSGEPEQNRKAVELIIQKI 465
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 638 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 697
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 698 ITGTPAATQAAQYLITQRITY 718
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 637 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 696
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 697 TITGTPAATQAAQYLITQRITYE 719
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 383 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 441
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 442 ERVVTVSGEPEQNRKAVELIIQKI 465
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
+N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+ GT+ER I
Sbjct: 267 SNPEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLI 326
Query: 310 SGPQRSIRTAESMIMQKV 327
G ++ I +K+
Sbjct: 327 QGTVEALNAVHGFIAEKI 344
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 643 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 702
Query: 179 DEQMRALELILLKLSED 195
A LI +++ +
Sbjct: 703 AATQAAQYLITQRITYE 719
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 157/321 (48%), Gaps = 49/321 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK---TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
A ++IDKL E+ + + LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKL-EEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 154 VIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY--- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 130 QVQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 207 -TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHY---------------GPN 242
+ + V F+G G Y A+P P H A +H+ P
Sbjct: 186 PSSSPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPE 243
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
+ G + +T S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+
Sbjct: 244 VKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGS 300
Query: 303 SERKVTISGPQRSIRTAESMI 323
++R+VTI+G SI A+ +I
Sbjct: 301 TDRQVTITGSAASISLAQYLI 321
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 252 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 308
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 309 GSAASISLAQYLINVRLSSE 328
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 252 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 308
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 309 GSAASISLAQYLINVRLSSET 329
>gi|328702094|ref|XP_003241800.1| PREDICTED: hypothetical protein LOC100161431 isoform 2
[Acyrthosiphon pisum]
gi|328702096|ref|XP_001944651.2| PREDICTED: hypothetical protein LOC100161431 isoform 1
[Acyrthosiphon pisum]
Length = 657
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 114/195 (58%), Gaps = 9/195 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE-I 94
+++ L+ AGA+IGKGG TI Q+++ +I++S++++F+PGTT+R+ +ISG+ E I
Sbjct: 197 HMKILIPCITAGAIIGKGGETIAQLQTETNTKIKMSKTNDFYPGTTERVCIISGSSSEHI 256
Query: 95 LRAVDLVIDKLLTELHAEDQADDVG-----TKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ A+ +++++ + A ++ + G + ++++++PNS+ G IIGKAGA IK +
Sbjct: 257 MAALTFIMERIREKPDASNRVQNSGDAIADREKQVKILIPNSTAGMIIGKAGAYIKQLKE 316
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
DS ++IS+ L +R +T++G + + IL K+ ED L + + Y
Sbjct: 317 DSGCFVQISQKAKDTT-LQERCITVSGNTEGNKKVCLCILNKIIEDPLSASCPNLSYADV 375
Query: 210 GVFFSGFH--GMPYG 222
+ F+ G PY
Sbjct: 376 NGPVANFNPTGSPYA 390
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
V + +G ++G GGR+++EI Q+SG I +S +G + GT+ RKVTI G I A +
Sbjct: 582 VPESIVGAIIGPGGRSLVEIQQMSGVTIHISKKGVYAPGTTNRKVTICGSASGIAMANYL 641
Query: 323 IMQKV 327
+ Q++
Sbjct: 642 MQQRI 646
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 85/208 (40%), Gaps = 51/208 (24%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ-M 182
+++++P + G+IIGK G TI ++ IK+S+ + Y G +R+ ++G+ E M
Sbjct: 198 MKILIPCITAGAIIGKGGETIAQLQTETNTKIKMSKTNDFYPGTTERVCIISGSSSEHIM 257
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
AL I+ ++ E P+
Sbjct: 258 AALTFIMERIREK---------------------------------------------PD 272
Query: 243 MGGRKFQNNKD---DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
R QN+ D DR + I + + G ++G+ G I ++ + SG +++S +
Sbjct: 273 ASNR-VQNSGDAIADREKQVKILIPNSTAGMIIGKAGAYIKQLKEDSGCFVQISQKAKDT 331
Query: 300 SGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER +T+SG + I+ K+
Sbjct: 332 T-LQERCITVSGNTEGNKKVCLCILNKI 358
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + GA+IG GG ++ + Q SG I +S+ + PGTT+R + I G+ I A L
Sbjct: 582 VPESIVGAIIGPGGRSLVEIQQMSGVTIHISKKGVYAPGTTNRKVTICGSASGIAMANYL 641
Query: 101 VIDKLLTE 108
+ +++ E
Sbjct: 642 MQQRIVDE 649
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG-PQRSIRTAESMIMQKV 327
G ++G+GG I ++ + +IK+S DF+ GT+ER ISG I A + IM+++
Sbjct: 208 GAIIGKGGETIAQLQTETNTKIKMSKTNDFYPGTTERVCIISGSSSEHIMAALTFIMERI 267
Query: 328 AY---ASDRLMD 336
AS+R+ +
Sbjct: 268 REKPDASNRVQN 279
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 150/305 (49%), Gaps = 35/305 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY------ 206
++++ L +S +R +T+ G + ++ I + + E + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 207 ---TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG-----PNMGGRKFQNNKDDRTNS 258
+AG + H + P + H G P + G + +T S
Sbjct: 185 SPVIFAGGQLTKLHQLAMQQSHFP---MTHGNTGFSGIESSSPEVKGYWAGLDASAQTTS 241
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI
Sbjct: 242 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISL 298
Query: 319 AESMI 323
A+ +I
Sbjct: 299 AQYLI 303
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 62/227 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL---------------------------LTELH--AEDQA-- 115
I+G I+ V + + LT+LH A Q+
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHF 207
Query: 116 --------------------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
D T L +PN G IIG+ GA I
Sbjct: 208 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IKI+ + G DR VT+TG+ A LI ++LS +T
Sbjct: 268 MSGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 311
>gi|403264854|ref|XP_003924682.1| PREDICTED: RNA-binding protein Nova-1 [Saimiri boliviensis
boliviensis]
Length = 595
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 139 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 197
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 198 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 257
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 258 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 316
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 317 QNRKAVELIIQKIQEDPQSGSCLNISY 343
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 140 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 198
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 199 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 249
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 250 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 301
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 302 IN-LQERVVTVSGEPEQNRKAVELIIQKI 329
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 502 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 561
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 562 ITGTPAATQAAQYLITQRITY 582
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+GT
Sbjct: 512 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 571
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 572 AQYLITQRITYE 583
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 247 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 305
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 306 ERVVTVSGEPEQNRKAVELIIQKI 329
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 122 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 181
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 182 GTTERVCLIQGTVEALNAVHGFIAEKI 208
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 507 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 566
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 567 AATQAAQYLITQRIT 581
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 157/331 (47%), Gaps = 65/331 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-------LRLIVPNSSCGSIIGKAGATIKSFMD 149
A ++ K ED + + T LRL+VP S CGS+IGK G+ IK +
Sbjct: 71 AFAMIAYKF-----EEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 150 DSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY- 206
+ A ++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 126 STGAQVQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYR 179
Query: 207 ---TYAGVFFSGFHGMPYG-----AVPPP----------------------VPAVPHNT- 235
A V F+G G Y A+P P PA P
Sbjct: 180 PKPASAPVIFAG--GQAYSIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKL 237
Query: 236 ---AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
++ N+ G+ + + ++ + + ++ IG ++GR G I EI Q+SGA+IK+
Sbjct: 238 PLHSSEEAQNLMGQSAGMDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 297
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ G++ER++TI+G +I A+ +I
Sbjct: 298 ASA---MEGSAERQITITGSPANISLAQYLI 325
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
+S D + + + + N L G +IG+ G+ IN+ + SGA+I+++ + E G+ +R
Sbjct: 251 QSAGMDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAME---GSAER 307
Query: 84 IIMISGTIDEILRAVDLVIDKLLTEL 109
I I+G+ I A L+ +L +E+
Sbjct: 308 QITITGSPANISLAQYLINARLTSEV 333
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 156/318 (49%), Gaps = 47/318 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHY---------------GPNMGG 245
+ V F+G G Y A+P P H A +H+ P + G
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKG 242
Query: 246 RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+ +T S + + ++ IG ++GR G I EI Q+SGA+IK ++ G+++R
Sbjct: 243 YWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANP---VEGSTDR 299
Query: 306 KVTISGPQRSIRTAESMI 323
+VTI+G SI A+ +I
Sbjct: 300 QVTITGSAASISLAQYLI 317
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+ + E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 305 GSAASISLAQYLINVRLSSE 324
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IK + + G DR VT+T
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTA---NPVEGSTDRQVTIT 304
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 305 GSAASISLAQYLINVRLSSET 325
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 153/307 (49%), Gaps = 38/307 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYG--PNMGGRK-----FQNNKDDRT 256
V F+G G Y A+P P H A P +G + T
Sbjct: 185 TPVIFAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTTPAFPGLDASPPAST 242
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+ LTI ++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G +I
Sbjct: 243 HELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANI 297
Query: 317 RTAESMI 323
A+ +I
Sbjct: 298 SLAQYLI 304
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|313229072|emb|CBY18224.1| unnamed protein product [Oikopleura dioica]
gi|313246840|emb|CBY35700.1| unnamed protein product [Oikopleura dioica]
Length = 293
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 120/225 (53%), Gaps = 11/225 (4%)
Query: 2 ETNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQ 61
E N+ S D+ G S++ + L P ++ LV AG++IGK G TI Q
Sbjct: 67 EDNQESKRHQSDISGTTSSSLM--LREKTEAGPLLLKILVPAYAAGSIIGKCGQTITQLQ 124
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK 121
SGA I+LS++ +F+PGTT+RI +++G + + +K +D A G +
Sbjct: 125 KDSGAVIKLSKAKDFYPGTTERIGLVTGDAAALKHVYRFMTEKTFEFPVPKDMAIQNGDR 184
Query: 122 TK-LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K ++IVPN++ G IIGKAGATIK M+ + A +++S+ L +R++T+TG E
Sbjct: 185 HKQAKIIVPNTTAGLIIGKAGATIKHIMESTGAKVQLSQKPEQ-INLQERVITVTGEKSE 243
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVP 225
A ++IL K+ ED Q+ + P + +SGF G A P
Sbjct: 244 LYNAGDVILAKIKED---PQSGSCP----NLSYSGFAGPVANANP 281
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 48/204 (23%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + GSIIGK G TI DS AVIK+S+ Y G +R+ +TG
Sbjct: 100 LKILVPAYAAGSIIGKCGQTITQLQKDSGAVIKLSKAKDFYPGTTERIGLVTG----DAA 155
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
AL+ + ++E +T P VP + A G
Sbjct: 156 ALKHVYRFMTE-----KTFEFP-------------------------VPKDMAIQNG--- 182
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR I V + G ++G+ G I I + +GA++++S + + +
Sbjct: 183 ----------DRHKQAKIIVPNTTAGLIIGKAGATIKHIMESTGAKVQLSQKPEQIN-LQ 231
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +T++G + + A +I+ K+
Sbjct: 232 ERVITVTGEKSELYNAGDVILAKI 255
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 152/310 (49%), Gaps = 43/310 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSGFHGMPYG-----AVPPP----------VPAVPHNTAAHYGPNMGGRKFQNNKD 253
V F+G G Y A+P P + P P G +
Sbjct: 217 TPVIFAG--GQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPG--LDASPP 272
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
T+ LTI ++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G
Sbjct: 273 ASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTP 327
Query: 314 RSIRTAESMI 323
+I A+ +I
Sbjct: 328 ANISLAQYLI 337
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSALSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|7025507|gb|AAF35907.1|AF232828_1 ventral neuron-specific protein 1 NOVA1 [Mus musculus]
Length = 493
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 116/224 (51%), Gaps = 40/224 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 37 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 95
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 96 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 155
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 156 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 214
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 215 QNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 258
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 38 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EALN 96
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 97 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 147
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 148 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 199
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 200 IN-LQERVVTVSGEPEQNRKAVELIIQKI 227
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 400 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 459
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 460 ITGTPAATQAAQYLITQRITY 480
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 399 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 458
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 459 TITGTPAATQAAQYLITQRITYE 481
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 145 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 203
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 204 ERVVTVSGEPEQNRKAVELIIQKI 227
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 20 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 79
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 80 GTTERVCLIQGTIEALNAVHGFIAEKI 106
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 397 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 454
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 455 NRKVTITGTPAATQAAQYLITQRIT 479
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 152/310 (49%), Gaps = 43/310 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPP----------VPAVPHNTAAHYGPNMGGRKFQNNKD 253
V F+G G Y A+P P + P P G +
Sbjct: 185 TPVIFAG--GQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPG--LDASPP 240
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
T+ LTI ++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G
Sbjct: 241 ASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTP 295
Query: 314 RSIRTAESMI 323
+I A+ +I
Sbjct: 296 ANISLAQYLI 305
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|256017197|ref|NP_067336.1| RNA-binding protein Nova-1 [Mus musculus]
gi|122065708|sp|Q9JKN6.2|NOVA1_MOUSE RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|148704854|gb|EDL36801.1| mCG140771, isoform CRA_b [Mus musculus]
gi|149051188|gb|EDM03361.1| neuro-oncological ventral antigen 1, isoform CRA_b [Rattus
norvegicus]
Length = 507
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 116/224 (51%), Gaps = 40/224 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 272
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EALN 110
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 111 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 161
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 162 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 213
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 214 IN-LQERVVTVSGEPEQNRKAVELIIQKI 241
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 414 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 473
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 474 ITGTPAATQAAQYLITQRITY 494
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTIEALNAVHGFIAEKI 120
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 419 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 479 AATQAAQYLITQRIT 493
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 152/310 (49%), Gaps = 43/310 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSGFHGMPYG-----AVPPP----------VPAVPHNTAAHYGPNMGGRKFQNNKD 253
V F+G G Y A+P P + P P G +
Sbjct: 217 TPVIFAG--GQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPG--LDASPP 272
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
T+ LTI ++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G
Sbjct: 273 ASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTP 327
Query: 314 RSIRTAESMI 323
+I A+ +I
Sbjct: 328 ANISLAQYLI 337
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 228 VPAV-PHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNI 279
VP+V PH+T + H P+ G R K + T ++ + + + +G ++G+ G +
Sbjct: 9 VPSVLPHSTLSALSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETV 68
Query: 280 MEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
++ + SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 69 KKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 152/310 (49%), Gaps = 43/310 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPP----------VPAVPHNTAAHYGPNMGGRKFQNNKD 253
V F+G G Y A+P P + P P G +
Sbjct: 185 TPVIFAG--GQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPG--LDASPP 240
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
T+ LTI ++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G
Sbjct: 241 ASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTP 295
Query: 314 RSIRTAESMI 323
+I A+ +I
Sbjct: 296 ANISLAQYLI 305
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 43/310 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDTIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ ++ I + + E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 186
Query: 209 AGVFFSGFHGMPYG-----AVPPP----------VPAVPHNTAAHYGPNMGGRKFQNNKD 253
V FSG G Y A+P P + P P G +
Sbjct: 187 TPVIFSG--GQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQATPAFPG--LDASPP 242
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
T+ LTI ++ IG ++GR G I EI Q+SGA+IK+++ G+SER++TI+G
Sbjct: 243 ASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANA---MEGSSERQITITGTP 297
Query: 314 RSIRTAESMI 323
+I A+ +I
Sbjct: 298 ANISLAQYLI 307
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 86 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNS 143
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT + I++ V + +L
Sbjct: 144 TERAVTISGTPEAIIQCVKQICVVML 169
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 25 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDTIFKAFAMIAY 79
Query: 326 K 326
K
Sbjct: 80 K 80
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G P YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSANQGFPVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPGTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFPVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 151/306 (49%), Gaps = 35/306 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG-- 210
++++ L +S +R VT++GT D ++ ++ I + + E T+ V A
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKPASTP 186
Query: 211 VFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP----NMGGRKFQNNKD----DRTN 257
V F+G G Y A+P P H A P F D T+
Sbjct: 187 VIFAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPAGLDASPPASTH 244
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
LTI ++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G +I
Sbjct: 245 ELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANIS 299
Query: 318 TAESMI 323
A+ +I
Sbjct: 300 LAQYLI 305
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 245 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 301
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 302 QYLINARLTSEV 313
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 164/347 (47%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 187 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG+++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGYIIGRQGANINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 348
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 260 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGYIIGRQGANINEIRQMSGAQIKIA--- 316
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 317 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGYIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 156/323 (48%), Gaps = 50/323 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG-------------------FHGMPYGAVP-PPV----PAVPHNT----AAHYG 240
V F+G H + P PP+ PA P ++
Sbjct: 217 TPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 276
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 277 QNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE--- 333
Query: 301 GTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 334 GSSERQITITGTPANISLAQYLI 356
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA---HYGPNMGGRKFQNNKDDRTNSLTIGVA----DEHIGFVVGRGGRNIMEIS 283
+PH+T + H GR+ ++ + ++T+ + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSALSHPPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|314122254|ref|NP_001186641.1| RNA-binding protein Nova-1 isoform 1 [Gallus gallus]
gi|387763164|ref|NP_001248729.1| RNA-binding protein Nova-1 [Macaca mulatta]
gi|57090475|ref|XP_547754.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Canis lupus
familiaris]
gi|114652475|ref|XP_001170675.1| PREDICTED: RNA-binding protein Nova-1 isoform 3 [Pan troglodytes]
gi|224051378|ref|XP_002200539.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Taeniopygia
guttata]
gi|291403671|ref|XP_002718160.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 1
[Oryctolagus cuniculus]
gi|296214716|ref|XP_002753741.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Callithrix
jacchus]
gi|297694849|ref|XP_002824680.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Pongo abelii]
gi|332223197|ref|XP_003260754.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Nomascus
leucogenys]
gi|344273491|ref|XP_003408555.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Loxodonta
africana]
gi|395838270|ref|XP_003792040.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Otolemur
garnettii]
gi|402875871|ref|XP_003901717.1| PREDICTED: RNA-binding protein Nova-1-like [Papio anubis]
gi|410962020|ref|XP_003987575.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Felis catus]
gi|426376604|ref|XP_004055087.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Gorilla
gorilla gorilla]
gi|355778493|gb|EHH63529.1| hypothetical protein EGM_16516 [Macaca fascicularis]
gi|380813130|gb|AFE78439.1| RNA-binding protein Nova-1 isoform 1 [Macaca mulatta]
gi|410293724|gb|JAA25462.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
gi|410353659|gb|JAA43433.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
Length = 507
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 40/224 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 272
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 110
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 111 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 161
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 162 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 213
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 214 IN-LQERVVTVSGEPEQNRKAVELIIQKI 241
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 414 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 473
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 474 ITGTPAATQAAQYLITQRITY 494
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTVEALNAVHGFIAEKI 120
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 419 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 479 AATQAAQYLITQRIT 493
>gi|348558003|ref|XP_003464808.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Cavia porcellus]
Length = 507
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 40/224 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 272
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 110
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 111 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 161
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 162 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 213
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 214 IN-LQERVVTVSGEPEQNRKAVELIIQKI 241
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 414 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 473
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 474 ITGTPAATQAAQYLITQRITY 494
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTVEALNAVHGFIAEKI 120
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 419 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 479 AATQAAQYLITQRIT 493
>gi|326920695|ref|XP_003206604.1| PREDICTED: RNA-binding protein Nova-1-like [Meleagris gallopavo]
Length = 520
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 40/224 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 64 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 122
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 123 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 182
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 183 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 241
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 242 QNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 285
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 123
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 124 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 174
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 175 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 226
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 227 IN-LQERVVTVSGEPEQNRKAVELIIQKI 254
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 427 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 486
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 487 ITGTPAATQAAQYLITQRITY 507
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 426 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 485
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 486 TITGTPAATQAAQYLITQRITYE 508
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 172 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 230
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 231 ERVVTVSGEPEQNRKAVELIIQKI 254
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 47 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 106
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 107 GTTERVCLIQGTVEALNAVHGFIAEKI 133
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 432 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 491
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 492 AATQAAQYLITQRIT 506
>gi|444728868|gb|ELW69310.1| RNA-binding protein Nova-1 [Tupaia chinensis]
Length = 482
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 40/224 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 25 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 83
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 84 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 143
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 144 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 202
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 203 QNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 246
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 26 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 84
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 85 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 135
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 136 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 187
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 188 IN-LQERVVTVSGEPEQNRKAVELIIQKI 215
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 389 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 448
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 449 ITGTPAATQAAQYLITQRITY 469
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 388 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 447
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 448 TITGTPAATQAAQYLITQRITYE 470
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 133 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 191
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 192 ERVVTVSGEPEQNRKAVELIIQKI 215
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 8 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 67
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 68 GTTERVCLIQGTVEALNAVHGFIAEKI 94
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 386 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 443
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 444 NRKVTITGTPAATQAAQYLITQRIT 468
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 117/201 (58%), Gaps = 17/201 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ G+ + +L
Sbjct: 35 FLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAESLL 94
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT------------KTKLRLIVPNSSCGSIIGKAGAT 143
+ + +K + E+ +D+G + +LIVPN++ G IIGK GAT
Sbjct: 95 SVHNFIAEK-VREVPQGGTKNDLGVLLPPQTTINAERAKQAKLIVPNTTAGLIIGKGGAT 153
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQT-M 202
++S M++S A +++S+ + L++R+VT++G + +A+ I+ K ED T +
Sbjct: 154 VRSIMEESGAWVQLSQ-KPAGPNLHERVVTVSGEPSQVQKAIRSIIHKSREDPPQGTTHL 212
Query: 203 TVPYTYAG--VFFSGFHGMPY 221
+ YT + V S G PY
Sbjct: 213 NISYTNSQGPVANSNPTGSPY 233
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 52/72 (72%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+L + V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+GP + +
Sbjct: 329 TLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGPPGATQ 388
Query: 318 TAESMIMQKVAY 329
A+ +I Q+VAY
Sbjct: 389 AAQYLIGQRVAY 400
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT R + I+G
Sbjct: 330 LEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITG 382
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ + +V N AG +IGKGG+T+ +SGA +QLS+ P +R++ +SG
Sbjct: 129 ERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQLSQ-KPAGPNLHERVVTVSGEP 187
Query: 92 DEILRAVDLVIDK 104
++ +A+ +I K
Sbjct: 188 SQVQKAIRSIIHK 200
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG+ I+++ + +GA IK+S DF+ GT+ER + G S+ + + I +KV
Sbjct: 46 GSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAESLLSVHNFIAEKV 104
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A+ V K L + VP + G+I+GK G T+ + + + A I+IS+ G R VT+
Sbjct: 321 AESVTGKETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTI 380
Query: 175 TG 176
TG
Sbjct: 381 TG 382
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 156/323 (48%), Gaps = 50/323 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG-------------------FHGMPYGAVP-PPV----PAVPHNT----AAHYG 240
V F+G H + P PP+ PA P ++
Sbjct: 217 TPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 276
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 277 QNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE--- 333
Query: 301 GTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 334 GSSERQITITGTPANISLAQYLI 356
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSALSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|56549653|ref|NP_002506.2| RNA-binding protein Nova-1 isoform 1 [Homo sapiens]
gi|50959950|gb|AAH75039.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|50960205|gb|AAH75038.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|119586397|gb|EAW65993.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|119586399|gb|EAW65995.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|158255480|dbj|BAF83711.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 40/224 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 272
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 110
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 111 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 161
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + + + SGA +++S + D
Sbjct: 162 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG 213
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 214 IN-LQERVVTVSGEPEQNRKAVELIIQKI 241
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 414 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 473
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 474 ITGTPAATQAAQYLITQRITY 494
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTVEALNAVHGFIAEKI 120
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 419 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 479 AATQAAQYLITQRIT 493
>gi|158256368|dbj|BAF84157.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 40/224 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 272
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 110
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 111 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 161
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + + + SGA +++S + D
Sbjct: 162 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG 213
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 214 IN-LQERVVTVSGEPEQNRKAVELIIQKI 241
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 414 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 473
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 474 ITGTPAATQAAQYLITQRITY 494
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTVEALNAVHGFIAEKI 120
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 419 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 479 AATQAAQYLITQRIT 493
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 156/323 (48%), Gaps = 50/323 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 51 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 105
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 106 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 165
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 166 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 219
Query: 209 AGVFFSG-------------------FHGMPYGAVP-PPV----PAVPHNT----AAHYG 240
V F+G H + P PP+ PA P ++
Sbjct: 220 TPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 279
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 280 QNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE--- 336
Query: 301 GTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 337 GSSERQITITGTPANISLAQYLI 359
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 119 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 176
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 177 TERAVTISGTPDAIIQCVKQICVVML 202
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 229 PAVPHNTAA--------HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIM 280
P +PH+T H+G M K + T ++ + + + +G ++G+ G +
Sbjct: 14 PILPHSTLGTLSHHPELHFGGKME-SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVK 72
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
++ + SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 KMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 113
>gi|156717598|ref|NP_001096339.1| neuro-oncological ventral antigen 1 [Xenopus (Silurana) tropicalis]
gi|134023955|gb|AAI35782.1| LOC100124925 protein [Xenopus (Silurana) tropicalis]
Length = 508
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 40/224 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTELHAEDQADD------------------------------------VG 119
AV I + + E+ + +
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLSSLPPATKSSPSDPMTIS 169
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RASQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 229 QNRKAVELIVQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 272
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 415 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 474
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q+V Y
Sbjct: 475 ITGTPAATQAAQYLITQRVTY 495
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 36/215 (16%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---- 179
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 180 ------EQMRALELILLKLSE-DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
E++R + + K L QT P S +PP + P
Sbjct: 112 VHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLSS---------LPPATKSSP 162
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ R + + I V + G ++G+GG + + + SGA +++
Sbjct: 163 SDPMTI---------------SRASQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 207
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
S + D + ER VT+SG R A +I+QK+
Sbjct: 208 SQKPDGIN-LQERVVTVSGEPEQNRKAVELIVQKI 241
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 414 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 473
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 474 TITGTPAATQAAQYLITQRVTYE 496
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP + + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTISRASQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L++ K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIVQKI 241
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQFFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTVEALNAVHGFIAEKI 120
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 420 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 479
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 480 AATQAAQYLITQRVT 494
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 156/323 (48%), Gaps = 50/323 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG-------------------FHGMPYGAVP-PPV----PAVPHNT----AAHYG 240
V F+G H + P PP+ PA P ++
Sbjct: 217 TPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 276
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 277 QNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE--- 333
Query: 301 GTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 334 GSSERQITITGTPANISLAQYLI 356
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 61 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 115
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 116 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 175
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 176 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 229
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 230 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 289
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 290 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 347
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 348 -GSSERQITITGTPANISLAQYLI 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 129 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 186
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 187 TERAVTISGTPDAIIQCVKQICVVML 212
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 231 VPHNTAAHY--GPNMGGRKFQNNKDDRTNSLTIGVA----DEHIGFVVGRGGRNIMEISQ 284
+PH+T + P GRK ++ + ++T+ + + +G ++G+ G + ++ +
Sbjct: 27 LPHSTLSTLILHPPHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMRE 86
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 87 ESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 123
>gi|355693195|gb|EHH27798.1| hypothetical protein EGK_18083, partial [Macaca mulatta]
Length = 488
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 32 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 90
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 91 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 150
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 151 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 209
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 210 QNRKAVELIIQKIQEDPQSGSCLNISY 236
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 33 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 91
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 92 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 142
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 143 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 194
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 195 IN-LQERVVTVSGEPEQNRKAVELIIQKI 222
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 395 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 454
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 455 ITGTPAATQAAQYLITQRITY 475
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 394 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 453
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 454 TITGTPAATQAAQYLITQRITYE 476
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 140 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 198
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 199 ERVVTVSGEPEQNRKAVELIIQKI 222
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 400 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 459
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 460 AATQAAQYLITQRIT 474
>gi|397475477|ref|XP_003809165.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Pan paniscus]
Length = 470
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 14 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 72
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 73 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 132
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 133 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 191
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 192 QNRKAVELIIQKIQEDPQSGSCLNISY 218
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 15 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 73
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 74 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 124
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 125 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 176
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 177 IN-LQERVVTVSGEPEQNRKAVELIIQKI 204
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 377 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 436
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 437 ITGTPAATQAAQYLITQRITY 457
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 376 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 435
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 436 TITGTPAATQAAQYLITQRITYE 458
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 122 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 180
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 181 ERVVTVSGEPEQNRKAVELIIQKI 204
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 251 NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
+++D L + + G ++G+GG+ I+++ + +GA IK+S DF+ GT+ER I
Sbjct: 7 SREDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 66
Query: 311 GPQRSIRTAESMIMQKV 327
G ++ I +K+
Sbjct: 67 GTVEALNAVHGFIAEKI 83
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 382 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 441
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 442 AATQAAQYLITQRIT 456
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 185 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 244
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 245 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 302
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 303 -GSSERQITITGTPANISLAQYLI 325
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 155/324 (47%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D + ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIFQCVKQICVVMLESP--PKGATIPYRPKPAC 184
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 185 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 244
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 245 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 302
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 303 -GSSERQITITGTPANISLAQYLI 325
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I + V + +L
Sbjct: 142 TERAVTISGTPDAIFQCVKQICVVML 167
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 185 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 244
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 245 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 302
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 303 -GSSERQITITGTPANISLAQYLI 325
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 159/340 (46%), Gaps = 60/340 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG--------------------------FHGMPYG--------AVPPPVPAVP 232
+ + V F+G G P A+P P
Sbjct: 187 SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKL 246
Query: 233 HNTA---AHYGPNMGGRKFQNNKDDRTNSL-TIGVADEHIGFVVGRGGRNIMEISQISGA 288
H A +H+ G F + D T + + + + IG ++GR G NI EI Q+SGA
Sbjct: 247 HQLAMQQSHFPMTHGNTGFSASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGA 306
Query: 289 RIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 307 QIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 343
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 270 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 326
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 327 SAASISLAQYLINARLSSE 345
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S D + + T+ + N L G +IG+ G+ IN+ + SGA+I+++ E G++ R
Sbjct: 266 SASLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQ 321
Query: 85 IMISGTIDEILRAVDLVIDKLLTE 108
+ I+G+ I A L+ +L +E
Sbjct: 322 VTITGSAASISLAQYLINARLSSE 345
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 156/323 (48%), Gaps = 50/323 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG-------------------FHGMPYGAVP-PPV----PAVPHNT----AAHYG 240
V F+G H + P PP+ PA P ++
Sbjct: 217 TPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 276
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 277 QNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE--- 333
Query: 301 GTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 334 GSSERQITITGTPANISLAQYLI 356
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 229 PAVPHNTAA--------HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIM 280
P +PH+T H+G M K + T ++ + + + +G ++G+ G +
Sbjct: 11 PILPHSTLGTLSHHPELHFGGKME-SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVK 69
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
++ + SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 70 KMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 150/310 (48%), Gaps = 43/310 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDTIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ ++ I + + E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 186
Query: 209 AGVFFSGFHGMPYG-----AVPPP----------VPAVPHNTAAHYGPNMGGRKFQNNKD 253
V FSG G Y A+P P + P P G
Sbjct: 187 TPVIFSG--GQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPG--LDAAPP 242
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
T+ LTI ++ IG ++GR G I EI Q+SGA+IK+++ G+SER++TI+G
Sbjct: 243 ASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANA---MEGSSERQITITGTP 297
Query: 314 RSIRTAESMI 323
+I A+ +I
Sbjct: 298 ANISLAQYLI 307
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 86 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNS 143
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT + I++ V + +L
Sbjct: 144 TERAVTISGTPEAIIQCVKQICVVML 169
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 25 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDTIFKAFAMIAY 79
Query: 326 K 326
K
Sbjct: 80 K 80
>gi|301768703|ref|XP_002919770.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Ailuropoda
melanoleuca]
Length = 517
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 61 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 119
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 120 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 179
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 180 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 238
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 239 QNRKAVELIIQKIQEDPQSGSCLNISY 265
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 62 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 120
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 121 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 171
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 172 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 223
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 224 IN-LQERVVTVSGEPEQNRKAVELIIQKI 251
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 424 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 483
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 484 ITGTPAATQAAQYLITQRITY 504
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 423 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 482
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 483 TITGTPAATQAAQYLITQRITYE 505
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 169 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 227
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 228 ERVVTVSGEPEQNRKAVELIIQKI 251
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 429 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 488
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 489 AATQAAQYLITQRIT 503
>gi|397475479|ref|XP_003809166.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pan paniscus]
Length = 466
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 10 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 68
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 69 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 128
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 129 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 187
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 188 QNRKAVELIIQKIQEDPQSGSCLNISY 214
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 11 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 69
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 70 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 120
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 121 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 172
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 173 IN-LQERVVTVSGEPEQNRKAVELIIQKI 200
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 373 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 432
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 433 ITGTPAATQAAQYLITQRITY 453
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 372 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 431
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 432 TITGTPAATQAAQYLITQRITYE 454
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 118 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 176
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 177 ERVVTVSGEPEQNRKAVELIIQKI 200
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 370 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 427
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 428 NRKVTITGTPAATQAAQYLITQRIT 452
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 157/329 (47%), Gaps = 61/329 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-------LRLIVPNSSCGSIIGKAGATIKSFMD 149
A ++ K ED + + T LRL+VP S CGS+IGK G+ IK +
Sbjct: 71 AFAMIAYKF-----EEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 150 DSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY- 206
+ A ++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 126 STGAQVQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYR 179
Query: 207 ---TYAGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT--- 235
V F+G H + P PP+ PA P
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTTPAFPGEKLPL 239
Query: 236 -AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD 294
++ N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++
Sbjct: 240 HSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 299
Query: 295 RGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ G+SER++TI+G +I A+ +I
Sbjct: 300 ATE---GSSERQITITGTPANISLAQYLI 325
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 51 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 105
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 106 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 165
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 166 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 219
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 220 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 279
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 280 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 337
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 338 -GSSERQITITGTPANISLAQYLI 360
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 119 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 176
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 177 TERAVTISGTPDAIIQCVKQICVVML 202
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
H+ H+G M K + T ++ + + + +G ++G+ G + ++ + SGARI +
Sbjct: 26 HHPQLHFGRKME-SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 84
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
S+ ER VTI+GP +I A +MI K
Sbjct: 85 SE-----GNCPERIVTITGPTDAIFKAFAMIAYK 113
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 153/326 (46%), Gaps = 55/326 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPP----------VPAVPHNTAAHYGPNMGGRKFQNNKD 253
V F+G G Y A+P P + P P G K +
Sbjct: 185 TPVIFAG--GQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSS 242
Query: 254 DRTNSLT----------------IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD 297
+ +L + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 243 EEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE 302
Query: 298 FFSGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 303 ---GSSERQITITGTPANISLAQYLI 325
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 217 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 335 -GSSERQITITGTPANISLAQYLI 357
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
H+ H+G M K + T ++ + + + +G ++G+ G + ++ + SGARI +
Sbjct: 23 HHPELHFGGKME-SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 81
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
S+ ER VTI+GP +I A +MI K
Sbjct: 82 SE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 47 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 101
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 102 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 161
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 162 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 215
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 216 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 275
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 276 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 333
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 334 -GSSERQITITGTPANISLAQYLI 356
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 115 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 172
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 173 TERAVTISGTPDAIIQCVKQICVVML 198
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 12 LPHSTLSALSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 71
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 72 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 109
>gi|354471632|ref|XP_003498045.1| PREDICTED: RNA-binding protein Nova-1 [Cricetulus griseus]
Length = 493
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 37 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 95
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 96 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 155
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 156 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 214
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 215 QNRKAVELIIQKIQEDPQSGSCLNISY 241
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 38 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 96
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 97 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 147
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 148 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 199
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 200 IN-LQERVVTVSGEPEQNRKAVELIIQKI 227
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 400 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 459
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 460 ITGTPAATQAAQYLITQRITY 480
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 399 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 458
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 459 TITGTPAATQAAQYLITQRITYE 481
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 145 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 203
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 204 ERVVTVSGEPEQNRKAVELIIQKI 227
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 397 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 454
Query: 169 DRLVTLTGTLDEQMRALELILLKLSED 195
+R VT+TGT A LI +++ +
Sbjct: 455 NRKVTITGTPAATQAAQYLITQRITYE 481
>gi|242019024|ref|XP_002429966.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212515021|gb|EEB17228.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 319
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 109/181 (60%), Gaps = 10/181 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S++++F+P TT+R+ +++G+++ I+
Sbjct: 69 HLKILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVCLVTGSVEAIM 128
Query: 96 RAVDLVIDKLLTELHAEDQADDVG-TKTKL--------RLIVPNSSCGSIIGKAGATIKS 146
+ ++DK+ + +A + T++KL ++++PNS+ G IIGK G IK
Sbjct: 129 AVMSFIMDKIKEKPDLTSKAINTSDTESKLSADRSKQVKILIPNSTAGMIIGKGGNYIKQ 188
Query: 147 FMDDSQAVIKIS-RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + I++S + + + L +R VT+ G ++ +A+ +L K+ ED + V
Sbjct: 189 MKEESGSYIQLSQKSNDASLQLQERCVTIIGEMENNKKAILKLLAKVVEDPQSGSCLNVS 248
Query: 206 Y 206
Y
Sbjct: 249 Y 249
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 42/206 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++VP + G+IIGK G TI D+ A +K+S+ + Y +R+ +TG+++ M
Sbjct: 70 LKILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVCLVTGSVEAIMA 129
Query: 184 ALELILLKLSEDT-LYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
+ I+ K+ E L S+ + T + +
Sbjct: 130 VMSFIMDKIKEKPDLTSKAINTSDTESKL------------------------------- 158
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS-G 301
DR+ + I + + G ++G+GG I ++ + SG+ I++S + + S
Sbjct: 159 ---------SADRSKQVKILIPNSTAGMIIGKGGNYIKQMKEESGSYIQLSQKSNDASLQ 209
Query: 302 TSERKVTISGPQRSIRTAESMIMQKV 327
ER VTI G + + A ++ KV
Sbjct: 210 LQERCVTIIGEMENNKKAILKLLAKV 235
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I ++ + +GAR+K+S DF+ T+ER ++G +I S IM K+
Sbjct: 80 GAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVCLVTGSVEAIMAVMSFIMDKIK 139
Query: 329 YASD 332
D
Sbjct: 140 EKPD 143
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS-RSHEFFPGTTDRI 84
LS+D +++ ++ L+ N AG +IGKGG+ I + +SG+ IQLS +S++ +R
Sbjct: 158 LSADRSKQ---VKILIPNSTAGMIIGKGGNYIKQMKEESGSYIQLSQKSNDASLQLQERC 214
Query: 85 IMISGTIDEILRAVDLVIDKLLTE 108
+ I G ++ +A+ ++ K++ +
Sbjct: 215 VTIIGEMENNKKAILKLLAKVVED 238
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 217 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 335 -GSSERQITITGTPANISLAQYLI 357
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 228 VPAV-PHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNI 279
VP+V PH+T + H P+ G R K + T ++ + + + +G ++G+ G +
Sbjct: 9 VPSVLPHSTLSALSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETV 68
Query: 280 MEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
++ + SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 69 KKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 217 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 335 -GSSERQITITGTPANISLAQYLI 357
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 229 PAVPHNTAA--------HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIM 280
P +PH+T H+G M K + T ++ + + + +G ++G+ G +
Sbjct: 11 PILPHSTLGTLSHHPELHFGGKME-SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVK 69
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
++ + SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 70 KMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 217 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 335 -GSSERQITITGTPANISLAQYLI 357
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|393909303|gb|EJD75396.1| hypothetical protein LOAG_17442 [Loa loa]
Length = 585
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 125/236 (52%), Gaps = 12/236 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
A K+ SD + ++ L+ + GA+IGKGG T+ + +S+SG R+Q+S++ E +PGT
Sbjct: 42 ATKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGT 101
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGS 135
+RI ++ G I +L+ D++++K+ ++ +D + K +++L+VPN+S G
Sbjct: 102 NERICLVKGKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGM 161
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGL--NDRLVTLTGTLDE-QMRALELILLKL 192
+IGK+GA IK + + A I++ S +R++T+ DE M AL+ +L K+
Sbjct: 162 VIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKV 221
Query: 193 SEDTLYSQTMTVPYTYAGVF--FSG-FHGMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
+ D ++ T+P F SG HG+ G + + + P GG
Sbjct: 222 AADPQHAMA-TIPDHKDDSFGPASGLLHGIGGGVQGQTIQPFDFSNRSQNAPQFGG 276
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+GG + + SG R+++S + + GT+ER + G S+ +I++K+
Sbjct: 67 VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKVSDVILEKI 126
Query: 328 AYASD 332
D
Sbjct: 127 REKVD 131
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 217 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 335 -GSSERQITITGTPANISLAQYLI 357
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSALSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 73 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 127
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 128 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 187
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 188 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 241
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 242 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 301
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 302 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 359
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 360 -GSSERQITITGSPANISLAQYLI 382
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 141 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 198
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 199 TERAVTISGTPDAIIQCVKQICVVML 224
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 80 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 134
Query: 326 K 326
K
Sbjct: 135 K 135
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 25 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 79
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 80 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 139
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 140 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 195
Query: 207 -TYAGVFFSGFH-------GMPYGAV----PP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 196 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 255
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 256 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 313
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 314 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 357
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 269 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 325
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 326 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 359
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 273 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 324
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 325 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 359
>gi|170580792|ref|XP_001895410.1| KH domain containing protein [Brugia malayi]
gi|158597654|gb|EDP35742.1| KH domain containing protein [Brugia malayi]
Length = 439
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 126/236 (53%), Gaps = 12/236 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
A K+ S+ + ++ L+ + GA+IGKGG T+ + +S+SG R+Q+S++ E +PGT
Sbjct: 20 ATKKAHVSETEDNMVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGT 79
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGS 135
+RI ++ G I +L+ D++++K+ ++ +D + K +++L+VPN+S G
Sbjct: 80 NERICLVKGKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGM 139
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGL--NDRLVTLTGTLDE-QMRALELILLKL 192
+IGK+GA IK + + A I++ S +R++T+ DE M AL+ +L K+
Sbjct: 140 VIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKV 199
Query: 193 SEDTLYSQTMTVPYTYAGVF--FSG-FHGMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
+ D ++ T+P F SG HGM G + ++ + P GG
Sbjct: 200 AADPQHAMA-TIPDHKDDSFGPASGLLHGMGGGVQGQTIQPFDFSSRSQNAPQFGG 254
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 39/75 (52%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+D + + + +G ++G+GG + + SG R+++S + + GT+ER + G
Sbjct: 30 EDNMVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGK 89
Query: 313 QRSIRTAESMIMQKV 327
S+ +I++K+
Sbjct: 90 IASVLKVSDVILEKI 104
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 154/331 (46%), Gaps = 65/331 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-------LRLIVPNSSCGSIIGKAGATIKSFMD 149
A ++ K ED + + T LRL+VP S CGS+IGK G+ IK +
Sbjct: 71 AFAMIAYKF-----EEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 150 DSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY- 206
+ A ++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 126 STGAQVQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYR 179
Query: 207 ---TYAGVFFSGFHGMPYG-----AVPPP----------VPAVPHNTAAHYGPNMGGRKF 248
V F+G G Y A+P P + P P G K
Sbjct: 180 PKPASTPVIFAG--GQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKL 237
Query: 249 QNNKDDRTNSLT----------------IGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ + +L + + ++ IG ++GR G I EI Q+SGA+IK+
Sbjct: 238 PLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 297
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ + G+SER++TI+G +I A+ +I
Sbjct: 298 ANATE---GSSERQITITGTPANISLAQYLI 325
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 25 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 79
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 80 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 139
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 140 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 195
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 196 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 255
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 256 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 313
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 314 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 357
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 99 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 156
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 157 IAGVPQSVTECVKQICLVMLETLSQ 181
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 269 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 325
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 326 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 359
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 273 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 324
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 325 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 359
>gi|164655395|ref|XP_001728827.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
gi|159102713|gb|EDP41613.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
Length = 382
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 167/347 (48%), Gaps = 33/347 (9%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSS--DPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
+E + S Y +P + G +T+ +S SS T P +R L+ A +IGK G IN
Sbjct: 49 VEQSPSLYASAPALSGVTNTSTTQSPSSYTPSTPGPIVMRALIITSDASVIIGKQGRHIN 108
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV 118
+ + S AR+ +S E P +RI+ +SG +D + +A L++ ++ E DQ
Sbjct: 109 EIRELSNARLNIS---ESIPSNPERILTVSGALDAVSKAFGLLVRRINDEPF--DQPSLP 163
Query: 119 GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
G++ +R I+PNS G+IIG+ G+ IK + S A ++ + G +R++++TG
Sbjct: 164 GSRAASIRFIIPNSRMGAIIGRQGSKIKEIQEASGA--RLHAGETMLPGSTERILSITGV 221
Query: 178 LDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
D A+ + L E +PY A V A+ P + P N+ +
Sbjct: 222 ADALHIAVYYVGATLLEHPDRGSN-NLPYRPAAV---------NRALTPSLVGSPLNSPS 271
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHI-------GFVVGRGGRNIMEISQISGARI 290
+M N+ + LT G+ + I G ++G+GG+ I EI Q+S + I
Sbjct: 272 A---SMLALSATNSPKALASVLTPGLQTQQIFIPNDLVGCIIGKGGQKINEIRQLSASHI 328
Query: 291 KVSDRGDFFSG---TSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
K+ +R + SER VTI+GP +I+ A +++ Q++ RL
Sbjct: 329 KIMERNAGIAAGGSGSERLVTITGPPPNIQMAVTLLYQRLEQEKMRL 375
>gi|395503649|ref|XP_003756176.1| PREDICTED: RNA-binding protein Nova-1-like [Sarcophilus harrisii]
Length = 488
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 32 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 90
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 91 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 150
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 151 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 209
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 210 QNRKAVELIIQKIQEDPQSGSCLNISY 236
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 33 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 91
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 92 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 142
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 143 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 194
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 195 IN-LQERVVTVSGEPEQNRKAVELIIQKI 222
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 395 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 454
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 455 ITGTPAATQAAQYLITQRITY 475
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 394 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 453
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 454 TITGTPAATQAAQYLITQRITYE 476
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 140 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 198
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 199 ERVVTVSGEPEQNRKAVELIIQKI 222
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 392 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 449
Query: 169 DRLVTLTGTLDEQMRALELILLKLSED 195
+R VT+TGT A LI +++ +
Sbjct: 450 NRKVTITGTPAATQAAQYLITQRITYE 476
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 185 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLSLHSSEE 244
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 245 AQNLMGQPSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 302
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 303 -GSSERQITITGTPANISLAQYLI 325
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
>gi|327259393|ref|XP_003214522.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 508
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 52 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 110
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 111 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 170
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 171 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 229
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 230 QNRKAVELIIQKIQEDPQSGSCLNISY 256
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 53 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EALN 111
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 112 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 162
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 163 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 214
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 215 IN-LQERVVTVSGEPEQNRKAVELIIQKI 242
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 415 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 474
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 475 ITGTPAATQAAQYLITQRITY 495
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 414 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 473
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 474 TITGTPAATQAAQYLITQRITYE 496
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 160 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 218
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 219 ERVVTVSGEPEQNRKAVELIIQKI 242
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 420 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 479
Query: 179 DEQMRALELILLKLSED 195
A LI +++ +
Sbjct: 480 AATQAAQYLITQRITYE 496
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 15 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 69
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 70 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 129
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 130 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 185
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 186 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 245
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 246 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 303
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 304 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 347
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 89 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 146
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 147 IAGVPQSVTECVKQICLVMLETLSQ 171
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 259 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 315
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 316 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 349
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 263 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 314
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 315 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 349
>gi|47216835|emb|CAG02726.1| unnamed protein product [Tetraodon nigroviridis]
Length = 457
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 115/213 (53%), Gaps = 28/213 (13%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--------------GTT 81
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+P GTT
Sbjct: 6 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPAFVMFESPEEKFTEGTT 65
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPN 130
+R+ +I GT++ + + + +K+ + + + V + ++IVPN
Sbjct: 66 ERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKIIVPN 125
Query: 131 SSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILL 190
S+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+
Sbjct: 126 STAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTISGEPEQNRKAVEIIVQ 184
Query: 191 KLSEDTLYSQTMTVPYTYAG--VFFSGFHGMPY 221
K+ ED S + + Y+ V S G PY
Sbjct: 185 KIQEDPQSSSCLNISYSNVSGPVANSNPTGSPY 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 51/77 (66%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+G
Sbjct: 368 DGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS 427
Query: 313 QRSIRTAESMIMQKVAY 329
+ + A+ +I Q++ Y
Sbjct: 428 PAATQAAQYLISQRITY 444
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 54/219 (24%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSY--------------YGLND 169
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPAFVMFESPEEKFTEGTTE 66
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-PV 228
R+ + GT++ I K+ E MP A P PV
Sbjct: 67 RVCLIQGTVEALNGVHNFIAEKVRE------------------------MPQSAQKPEPV 102
Query: 229 PAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
+ T + DR I V + G ++G+GG + + + SGA
Sbjct: 103 SILQPQTTVN--------------PDRVKQAKIIVPNSTAGLIIGKGGATVKAVMEQSGA 148
Query: 289 RIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+++S + + + ER VTISG R A +I+QK+
Sbjct: 149 WVQLSQKPEGIN-LQERVVTISGEPEQNRKAVEIIVQKI 186
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 374 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 433
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 434 AQYLISQRITYE 445
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E AD G K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 361 LATEKLAD--GAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTR 418
Query: 169 DRLVTLTGTLDEQMRALELI 188
+R VT+TG+ A LI
Sbjct: 419 NRKVTITGSPAATQAAQYLI 438
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 176 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 230
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 231 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 290
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 291 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 346
Query: 207 -TYAGVFFSGFH-------GMPYGAV----PP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 347 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 406
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 407 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 464
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 465 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 508
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 245 GRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE 304
GR+ + + T ++ + + + +G ++G+ G ++ I + SGARI +S+ E
Sbjct: 162 GRRLTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE-----GNCPE 216
Query: 305 RKVTISGPQRSIRTAESMIMQKV 327
R +T++GP +I A +MI+ K+
Sbjct: 217 RIITLTGPTNAIFKAFAMIIDKL 239
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 420 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 476
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 477 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 510
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
+ N L G +IG+ G+ IN+ + SGA+I+++ E G++ R + I+G+ I A
Sbjct: 444 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASISLAQ 500
Query: 99 DLVIDKLLTE 108
L+ +L +E
Sbjct: 501 YLINARLSSE 510
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 156/318 (49%), Gaps = 47/318 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHY---------------GPNMGG 245
+ V F+G G Y A+P P H A +H+ P + G
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKG 242
Query: 246 RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+ +T S + + ++ IG ++ R G I EI Q+SGA+IK+++ G+++R
Sbjct: 243 YWAGLDASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANP---VEGSTDR 299
Query: 306 KVTISGPQRSIRTAESMI 323
+VTI+G SI A+ +I
Sbjct: 300 QVTITGSAASISLAQYLI 317
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +I + G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 305 GSAASISLAQYLINVRLSSE 324
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G II + GA I S A IKI+ + G DR VT+T
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 304
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 305 GSAASISLAQYLINVRLSSET 325
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 112/193 (58%), Gaps = 9/193 (4%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
A K+ SD + ++ L+ + GA+IGKGG T+ + +S+SG R+Q+S++ E +PGT
Sbjct: 20 ATKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGT 79
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGS 135
+RI ++ G I +L+ D++++K+ ++ +D + K +++L+VPN+S G
Sbjct: 80 NERICLVKGKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGM 139
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGL--NDRLVTLTGTLDE-QMRALELILLKL 192
+IGK+GA IK + + A I++ S +R++T+ DE M AL+ +L K+
Sbjct: 140 VIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKV 199
Query: 193 SEDTLYSQTMTVP 205
+ D ++ T+P
Sbjct: 200 AADPQHAMA-TIP 211
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%)
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+GG + + SG R+++S + + GT+ER + G S+ +I++K+
Sbjct: 45 VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKVSDVILEKI 104
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 187 PASSPVICAGGQDRCGDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 348
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 260 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 316
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 317 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 187 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWAGLDASTQTTHELTI--PNNLIGCIIGRQGANINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 348
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ E G++ R + I+G+ I A
Sbjct: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASISLA 339
Query: 98 VDLVIDKLLTE 108
L+ +L +E
Sbjct: 340 QYLINARLSSE 350
>gi|72084060|ref|XP_790705.1| PREDICTED: uncharacterized protein LOC585801 isoform 2
[Strongylocentrotus purpuratus]
Length = 557
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 102/164 (62%), Gaps = 6/164 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ + AG++IGKGG TI Q +G ++LS++++F+PGT +R+ +++G ++ +
Sbjct: 79 LKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPVESLNN 138
Query: 97 AVDLVIDKLL--TELHAEDQADDVGTKTKLR---LIVPNSSCGSIIGKAGATIKSFMDDS 151
++DK+ +L + A+ + + + R ++VPNS+ G IIGK GA IKS M+ S
Sbjct: 139 VAVFILDKIKESPQLGVKAGAETITSPERARQVKIVVPNSTAGLIIGKGGAMIKSIMEQS 198
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ ++IS+ L++R++T++G D +A+ I+ K+ ED
Sbjct: 199 GSRVQISQKSDGIT-LSERVITISGESDNNRKAMSFIVNKIQED 241
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 44/207 (21%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K L++++P+++ GSIIGK G TI D+ +K+S+ + Y G +R+ LTG ++
Sbjct: 76 KYMLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPVES 135
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
IL K+ E + G
Sbjct: 136 LNNVAVFILDKIKE-----------------------------------------SPQLG 154
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
G +R + I V + G ++G+GG I I + SG+R+++S + D +
Sbjct: 155 VKAGAETI--TSPERARQVKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGIT 212
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
SER +TISG + R A S I+ K+
Sbjct: 213 -LSERVITISGESDNNRKAMSFIVNKI 238
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
++++DP +K + + V L GA++GKGG T+ +FQ+ +GA+IQ+S+ +E+ PGT +R
Sbjct: 465 TMAADP-QKESILESEVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRR 523
Query: 85 IMISGTIDEILRAVDLVIDKLLTE 108
+ I+G + A L++ +L E
Sbjct: 524 VTITGPVTAAQNAHFLIMQRLAQE 547
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 226 PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQI 285
P +P +P P+MGG + + + L V + +G ++G+GG+ ++E +
Sbjct: 444 PGLPMMPLGATMAGFPSMGGITMAADPQ-KESILESEVPETLVGAILGKGGKTLVEFQNL 502
Query: 286 SGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
+GA+I++S + ++ GT R+VTI+GP + + A +IMQ++A
Sbjct: 503 TGAKIQISKKNEYVPGTRNRRVTITGPVTAAQNAHFLIMQRLA 545
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ +V N AG +IGKGG+ I QSG+R+Q+S+ + ++R+I ISG
Sbjct: 166 ERARQVKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGI-TLSERVITISGES 224
Query: 92 DEILRAVDLVIDKL 105
D +A+ +++K+
Sbjct: 225 DNNRKAMSFIVNKI 238
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
DD L + + G ++G+GG+ I ++ + +G +K+S DF+ GT ER ++GP
Sbjct: 73 DDNKYMLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGP 132
Query: 313 QRSIRTAESMIMQKV 327
S+ I+ K+
Sbjct: 133 VESLNNVAVFILDKI 147
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A D ++ L VP + G+I+GK G T+ F + + A I+IS+ + G +R VT+
Sbjct: 467 AADPQKESILESEVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRRVTI 526
Query: 175 TGTLDEQMRALELILLKLSED 195
TG + A LI+ +L+++
Sbjct: 527 TGPVTAAQNAHFLIMQRLAQE 547
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 151/305 (49%), Gaps = 36/305 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY------ 206
++++ L +S +R +T+ G + ++ I + + E + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 207 ---TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG-----PNMGGRKFQNNKDDRTNS 258
+AG + H + P + H G P + G + + +T S
Sbjct: 185 SPVIFAGGQLTKLHQLAMQQSHFP---MTHGNTGFSGIESSSPEVKGY-WGLDASAQTTS 240
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G SI
Sbjct: 241 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISL 297
Query: 319 AESMI 323
A+ +I
Sbjct: 298 AQYLI 302
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 89/226 (39%), Gaps = 61/226 (26%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL---------------------------LTELH--AEDQA-- 115
I+G I+ V + + LT+LH A Q+
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHF 207
Query: 116 -------------------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
D T L +PN G IIG+ GA I
Sbjct: 208 PMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQM 267
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IKI+ + G DR VT+TG+ A LI ++LS +T
Sbjct: 268 SGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 310
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 187 PASSPVICAGGQDRCSDAVGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 348
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 260 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 316
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 317 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 187 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGSNINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 348
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ GS IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGSNINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ G+ I S A IKI+
Sbjct: 260 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGSNINEIRQMSGAQIKIA--- 316
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 317 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 151/317 (47%), Gaps = 44/317 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP------- 205
++++ L +S +R VT++GT D ++ ++ I + + E T+ V
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKPASTP 186
Query: 206 --------YTYAGVF------FSGFHGMPYGAVP-PPV----PAVPHNTAAHYGPNMGGR 246
YT G + + H + P PP+ PA P A
Sbjct: 187 VIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTDRAVPFVRSPWA 246
Query: 247 KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERK 306
+ T+ LTI ++ IG ++GR G I EI Q+SGA+IK+++ + G+SER+
Sbjct: 247 CLDASPPASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQ 301
Query: 307 VTISGPQRSIRTAESMI 323
+TI+G +I A+ +I
Sbjct: 302 ITITGTPANISLAQYLI 318
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 258 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 314
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 315 QYLINARLTSEV 326
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 187 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 348
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 260 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 316
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 317 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 155/323 (47%), Gaps = 42/323 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L G VIGKGG T+ + + QSGAR+ +S T +RI+ I+GT + I +
Sbjct: 23 IRILFHGREVGNVIGKGGETVKNIRDQSGARVLISDGS-----TPERIVTITGTTNAICK 77
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKL--RLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +L+ K+ E D G K L +LIVP S CG IIGK G IK + S A
Sbjct: 78 ATELIGLKV-EEFFERQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCKIKEIRESSGAA 136
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV-PYTYAGV 211
I+++ L +S +RLV++TGT + + + L + S T+ P +
Sbjct: 137 IQVASDMLPNS----TERLVSITGTTGTISQCVYQVCNVLLDSPPRSATIPYDPRSKTSG 192
Query: 212 FFSGFHGMPYG-AVPPPVPAV--------------PHNTAAHYGPNM--GGRKFQN---- 250
F S G +G P+ ++ P AA G + G R+ +N
Sbjct: 193 FASSAVGNDFGRQRTNPLASLAALGLGTASTGGINPAALAALAGSQLRTGNRQNRNGSGE 252
Query: 251 ----NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD-RGDFFSGTSE- 304
N + T ++++ V ++ IG V+GR G I EI QISGA + ++ G +G +E
Sbjct: 253 HKNQNSNSNTETISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHIAKGEGTHENGENED 312
Query: 305 RKVTISGPQRSIRTAESMIMQKV 327
R +TI+G + SI A+ +I V
Sbjct: 313 RHITITGNKDSISVAKYLIEMSV 335
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
+ P + +V G +IGKGG I + + SGA IQ+ + + P +T+R++ I+GT
Sbjct: 101 KAPLTFKLIVPASQCGFIIGKGGCKIKEIRESSGAAIQV--ASDMLPNSTERLVSITGTT 158
Query: 92 DEILRAVDLVIDKLL 106
I + V V + LL
Sbjct: 159 GTISQCVYQVCNVLL 173
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
N+ +D ++ I +G V+G+GG + I SGAR+ +SD T ER VTI
Sbjct: 14 NDYNDVNLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISD-----GSTPERIVTI 68
Query: 310 SGPQRSIRTAESMIMQKV 327
+G +I A +I KV
Sbjct: 69 TGTTNAICKATELIGLKV 86
>gi|380806987|gb|AFE75369.1| RNA-binding protein Nova-2, partial [Macaca mulatta]
Length = 296
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 108/189 (57%), Gaps = 16/189 (8%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L AV I + +
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEALNAVHSFIAEKV 59
Query: 107 TEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
E+ A + + V + +LIVPNS+ G IIGK GAT+K+ M+ S A
Sbjct: 60 REIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAW 119
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT-YAG-VF 212
+++S+ L +R+VT++G ++ +A+ I+ K+ ED S + + Y AG V
Sbjct: 120 VQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVA 178
Query: 213 FSGFHGMPY 221
S G PY
Sbjct: 179 NSNPTGSPY 187
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 77/194 (39%), Gaps = 38/194 (19%)
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
GSIIGK G TI ++ A IK+S+ Y G +R+ + GT + I K+
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 60
Query: 194 EDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD 253
E Q MT P + P T
Sbjct: 61 E---IPQAMTKPEVVNILQ-------------------PQTTM---------------NP 83
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
DR + V + G ++G+GG + + + SGA +++S + + + ER VT+SG
Sbjct: 84 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQERVVTVSGEP 142
Query: 314 RSIRTAESMIMQKV 327
+ A S I+QKV
Sbjct: 143 EQVHKAVSAIVQKV 156
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ +SG +++ +A
Sbjct: 90 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA 148
Query: 98 VDLVIDKL 105
V ++ K+
Sbjct: 149 VSAIVQKV 156
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 115 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 169
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 170 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 229
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 230 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 285
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 286 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 345
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 346 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 403
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 404 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 447
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 53/204 (25%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D+ +++ +RL++ GSIIGK G ++K ++S A I IS + +R++
Sbjct: 104 DEENELNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERII 158
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
TLTG + +A +I+ KL ED S T + A PPV
Sbjct: 159 TLTGPTNAIFKAFAMIIDKLEEDINSSMTNST-----------------AASRPPV---- 197
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+L + V G ++G+GG I EI + +GA+++V
Sbjct: 198 -------------------------TLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 232
Query: 293 SDRGDFFSGTSERKVTISGPQRSI 316
+ GD ++ER +TI+G +S+
Sbjct: 233 A--GDMLPNSTERAITIAGVPQSV 254
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 189 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 246
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 247 IAGVPQSVTECVKQICLVMLETLSQ 271
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 359 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 415
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 416 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 449
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ N+ + T ++ + + + +G ++G+ G ++ I + SGARI +S+ ER +T
Sbjct: 105 EENELNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE-----GNCPERIIT 159
Query: 309 ISGPQRSIRTAESMIMQKV 327
++GP +I A +MI+ K+
Sbjct: 160 LTGPTNAIFKAFAMIIDKL 178
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 363 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 414
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 415 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 449
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 161/341 (47%), Gaps = 66/341 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 187 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQN---------------NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEI 282
H+ GG F + +T S + + ++ IG ++GR G I EI
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEI 306
Query: 283 SQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 307 RQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 344
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 275 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 331
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 332 GSAASISLAQYLINVRLSSE 351
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 275 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 331
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 332 GSAASISLAQYLINVRLSSET 352
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ I + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKRIREESGARINISE-----GNCPERIITLTGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 156/334 (46%), Gaps = 61/334 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 235 TA---AHYGPNMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
A +H+ G F D +T S + + ++ IG ++GR G I EI Q+SGA+
Sbjct: 245 LAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIHQMSGAQ 304
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 IKIANP---VEGSTDRQVTITGSAASISLAQYLI 335
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ SGA+I+++ E G+TDR + I+
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIHQMSGAQIKIANPVE---GSTDRQVTIT 322
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 323 GSAASISLAQYLI 335
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIHQMSGAQIKIA---NPVEGSTDRQVTIT 322
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTV 204
G+ A LI + L SQ +V
Sbjct: 323 GSAASISLAQYLINVSLENAKPSSQAASV 351
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 157/332 (47%), Gaps = 59/332 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG------------------------FHGMPYG--------AVPPPVPAVPHNTA 236
+ V F+G G P A+P P H A
Sbjct: 185 SPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLA 244
Query: 237 ---AHYGPNMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIK 291
+H+ + G F D +T S + + ++ IG ++GR G I EI Q+SGA+IK
Sbjct: 245 MQQSHFPMSHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIK 304
Query: 292 VSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 IANP---VEGSTDRQVTITGSAASISLAQYLI 333
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 264 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 320
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 321 GSAASISLAQYLINVRLSSE 340
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 264 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 320
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 321 GSAASISLAQYLINVRLSSET 341
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 158/320 (49%), Gaps = 48/320 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVK-MREESGARINISEGN-----CPERIITLAGPTNAIFK 69
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 70 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 129
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 130 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYWPKP 185
Query: 207 TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHY---------------GPNM 243
+ + V F+G G Y A+P P H A +H+ P +
Sbjct: 186 SSSPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEV 243
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
G + +T S + + ++ IG ++GR G I EI Q+SGA+IK+++ G++
Sbjct: 244 KGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGST 300
Query: 304 ERKVTISGPQRSIRTAESMI 323
+R+VTI+G SI A+ +I
Sbjct: 301 DRQVTITGSAASISLAQYLI 320
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 89 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 146
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 147 IAGIPQSIIECVKQICVVMLETL 169
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 251 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 307
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 308 GSAASISLAQYLINVRLSSE 327
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 251 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 307
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 308 GSAASISLAQYLINVRLSSET 328
>gi|328712758|ref|XP_003244898.1| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 154/335 (45%), Gaps = 51/335 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+++ G VIG G T+ + +SQSGAR+ +S T +RI++ISG I R
Sbjct: 30 IRILLNSREVGNVIGIRGETVKNIRSQSGARVLISNG-----STPERIVIISGNTIAICR 84
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT--KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +L+ K+ E + +G KT L+LIVP S CG IIGK G+ I+ D S+A
Sbjct: 85 ATELIGLKV-EEFSERLNGNWIGPKTPLTLKLIVPASQCGFIIGKNGSKIREIRDSSRAA 143
Query: 155 IKISRLDHSYYGLNDRLVTLTGT---------------LDEQMRALELILLKLSEDTLYS 199
I + + +RLV++TGT LD E I ++
Sbjct: 144 ILVG--SNMLPNSTERLVSITGTTGTISHCVYLVCNVLLDSPPPNCESIAYHPCKEISVF 201
Query: 200 QTMTV----------PYTYAGVFFSGFHGMPYGAVPPPVPAVPHN---TAAHYGPNMGGR 246
+T TV P T SG G P + A+ + + N+ G+
Sbjct: 202 ETCTVIKDLGTEHNIPLTNLAALGSG-TATNGGINPAALTALAGSQLRASNRLNNNVSGQ 260
Query: 247 KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS-GTSE- 304
++ N + ++ TI V D+ IG ++GR G I +I QISGA + + F S GT E
Sbjct: 261 QYDKNSNSDIDTTTISVPDDLIGCIIGRRGSKIAKIRQISGATVHI-----FRSQGTIEN 315
Query: 305 -----RKVTISGPQRSIRTAESMIMQKVAYASDRL 334
R++TI+G + S+ A+ +I V L
Sbjct: 316 REKVDRRITITGNKESVSVAKYLIEMSVELQKANL 350
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P ++ +V G +IGK GS I + + S A I + P +T+R++ I+GT
Sbjct: 110 PLTLKLIVPASQCGFIIGKNGSKIREIRDSSRAAILV--GSNMLPNSTERLVSITGTTGT 167
Query: 94 ILRAVDLVIDKLL 106
I V LV + LL
Sbjct: 168 ISHCVYLVCNVLL 180
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 15 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 69
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 70 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 129
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 130 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 185
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 186 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 245
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 246 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 303
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R++TI+G SI A+ +I +++
Sbjct: 304 IRQMSGAQIKIANP---VEGSSGRQITITGSAASISLAQYLINARLS 347
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 89 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 146
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 147 IAGVPQSVTECVKQICLVMLETLSQ 171
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 259 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 315
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R +T+TG+ A LI +LS +
Sbjct: 316 NPVEGSSGRQITITGSAASISLAQYLINARLSSE 349
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 263 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 314
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R I I+G+ I A L+ +L +E
Sbjct: 315 ANPVE---GSSGRQITITGSAASISLAQYLINARLSSE 349
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 157/336 (46%), Gaps = 61/336 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG--------------------------FHGMPYG--------AVPPPVPAVP 232
+ + V F+G G P A+P P
Sbjct: 187 SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKL 246
Query: 233 HNTA---AHYGPNMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISG 287
H A +H+ G F D +T S + + ++ IG ++GR G I EI Q+SG
Sbjct: 247 HQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSG 306
Query: 288 ARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
A+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 307 AQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 339
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 326
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 327 GSAASISLAQYLINVRLSSE 346
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 326
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 327 GSAASISLAQYLINVRLSSET 347
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 161/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSG-----------------FHGMPYGAVP-------PPVPAVPHNTAA---- 237
+ V +G G P A P+ N A
Sbjct: 187 PASSPVICAGGQDRCSDAAGYPHATHDLEGTPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 348
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 260 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 316
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 317 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 159/353 (45%), Gaps = 75/353 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G + F+ +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHRKEVGSIIGKKGESPKRFRKESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP CGS+IGK G IK + + A
Sbjct: 71 AFVMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 --TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM--------------------- 243
+ + G Y A P PH+T GP +
Sbjct: 187 PASSPVICAGGQDRWGYAAGYPHAAGYPHDTHYLEGPPLDAYSIQGQHTVSPLDLAKLNQ 246
Query: 244 ------------GGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRG 275
GG F + T+ TI + IG ++GR
Sbjct: 247 VARQQSHFAMMHGGTGFAGIDSNSPEVKGYWASLDASTQTTHEFTI--PNNLIGCIIGRQ 304
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G NI EI Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 GANINEIRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 354
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ F + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 270 SPEVKGYWA-------SLDASTQTTH-EFTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 321
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 322 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 356
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T +PN+ G IIG+ GA I S A IKI+
Sbjct: 266 IDSNSPEVKGYWASLDASTQTTHEFTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 322
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 323 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 356
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 150/309 (48%), Gaps = 41/309 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ D + R
Sbjct: 30 LRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEGS-----CPERITTITGSTDAVFR 84
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK----LRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
AV ++ KL +L A + GT +K LRL++P S CGS+IGKAGA IK + +
Sbjct: 85 AVSMIAFKLEEDLG--TGAINGGTVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRETTG 142
Query: 153 AVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY---- 206
A ++++ L +S +R VT++G D ++ + I + E + T+PY
Sbjct: 143 AQVQVAGDLLPNS----TERAVTVSGVPDAIIQCVRQICAVILESP--PKGATIPYHPNL 196
Query: 207 TYAGVFFSGFHGMP----YGAVPPPVPAVPHNTAAH--------YGPNMGGRKFQNNKDD 254
+ V S G YG + A + H P++ N+++
Sbjct: 197 SLGPVLLSANQGFSMQGQYGGISQAEVAKLQQLSGHPVSFSSLGQTPSIVAGLDTNSQNS 256
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
L V ++ IG ++GR G I EI Q+SGA IK+ G+ G++ER VTI+G
Sbjct: 257 SQEFL---VPNDLIGCIIGRQGSKISEIRQMSGAHIKI---GNQTEGSAERHVTITGTPV 310
Query: 315 SIRTAESMI 323
SI A+ +I
Sbjct: 311 SITLAQYLI 319
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG
Sbjct: 108 SKPPVTLRLVIPASQCGSLIGKAGAKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGV 165
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V + +L
Sbjct: 166 PDAIIQCVRQICAVIL 181
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 158/338 (46%), Gaps = 54/338 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K Q +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM-------- 202
I+++ L +S +R VTL+G+ ++ + + I L + E T+
Sbjct: 138 CSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 203 TVPYTYA-GVFFS--GFHGMPYGAV-----------------PPPVPAVPHN------TA 236
T P A G F+ G + +P V P + H A
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGSAPAALA 253
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
A G + N + + +T V+++ IG ++G+GG I EI QISGA I++S+
Sbjct: 254 ALAGSQLRTANPANRAQQQQHEMT--VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCE 311
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
+ G ++R +TISG S+ A+ +I +++ + L
Sbjct: 312 EREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 349
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 275 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 334
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGM-PYGAVPPPV 228
LI +++S +T AG+ G+H + P V P+
Sbjct: 335 QYLINMRISMET------------AGLPIPGYHYIAPSAIVKTPI 367
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 158/340 (46%), Gaps = 58/340 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K ++ +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKF-------EEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 133
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM-------- 202
I+++ L +S +R VTL+G+ ++ + + I L + E T+
Sbjct: 134 CSIQVASEMLPNST----ERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 189
Query: 203 TVPYTYA-GVFFS--GFHGMPYGAV-----------------PPPVPAVPHN------TA 236
T P A G F+ G + +P V P + H A
Sbjct: 190 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGSAPAALA 249
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
A G + N + + +T V+++ IG ++G+GG I EI QISGA I++S+
Sbjct: 250 ALAGSQLRTANPANRAQQQQHEMT--VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCE 307
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
+ G ++R +TISG S+ A+ +I V L++
Sbjct: 308 EREGGNTDRTITISGNPDSVALAQYLINMSVELQKANLLE 347
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 156/334 (46%), Gaps = 61/334 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 235 TA---AHYGPNMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
A +H+ G F D +T S + + ++ IG ++GR G I EI Q+SGA+
Sbjct: 245 LAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ 304
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 IKIANP---VEGSTDRQVTITGSAASISLAQYLI 335
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 322
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 323 GSAASISLAQYLI 335
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 156/334 (46%), Gaps = 61/334 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 235 TA---AHYGPNMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
A +H+ G F D +T S + + ++ IG ++GR G I EI Q+SGA+
Sbjct: 245 LAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ 304
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 IKIANP---VEGSTDRQVTITGSAASISLAQYLI 335
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 322
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 323 GSAASISLAQYLINVRLSSE 342
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 322
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 323 GSAASISLAQYLINVRLSSET 343
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|402594254|gb|EJW88180.1| hypothetical protein WUBG_00913 [Wuchereria bancrofti]
Length = 407
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 120/220 (54%), Gaps = 12/220 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ + GA+IGKGG T+ + +S+SG R+Q+S++ E +PGT +RI ++ G I +L+
Sbjct: 4 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLK 63
Query: 97 AVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
D++++K+ ++ +D + K +++L+VPN+S G +IGK+GA IK + +
Sbjct: 64 VSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQT 123
Query: 152 QAVIKISRLDHSYYGL--NDRLVTLTGTLDE-QMRALELILLKLSEDTLYSQTMTVPYTY 208
A I++ S +R++T+ DE M AL+ +L K++ D ++ T+P
Sbjct: 124 GANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAADPQHAMA-TIPDHK 182
Query: 209 AGVF--FSG-FHGMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
F SG HGM G + ++ + P GG
Sbjct: 183 DDSFGPASGLLHGMGGGVQGQTIQPFDFSSRSQNAPQFGG 222
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 93/209 (44%), Gaps = 46/209 (22%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++++++P+++ G++IGK G T+++ +S +++S+ Y G N+R+ + G + +
Sbjct: 3 QVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVL 62
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
+ ++IL K+ E V +NT +
Sbjct: 63 KVSDVILEKIREK-----------------------------------VDNNTPSDI--- 84
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG- 301
F + +R N + + V + G V+G+ G I EI + +GA I+V +
Sbjct: 85 -----FDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAK 139
Query: 302 -TSERKVTISGPQRSIRT-AESMIMQKVA 328
+ ER +TI+ Q + A +++KVA
Sbjct: 140 VSQERIITIAAEQDEVLMDALQRVLEKVA 168
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL--SRSHEFFPGTTDRIIMISG 89
E+ ++ +V N AG VIGK G+ I + + Q+GA IQ+ + + +RII I+
Sbjct: 91 ERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAA 150
Query: 90 TIDEILR-AVDLVIDKL 105
DE+L A+ V++K+
Sbjct: 151 EQDEVLMDALQRVLEKV 167
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N + P + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 ANGGSVSRPPV--------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGMDPSTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N + P + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 ANGGSVSRPPV--------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N + P + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 ANGGSVSRPPV--------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N + P + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 ANGGSVSRPPV--------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 144/302 (47%), Gaps = 31/302 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 57 LRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 111
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK----LRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
AV ++ KL +L + + GT ++ LRL++P S CGS+IGKAG IK + +
Sbjct: 112 AVSMIAFKLDEDLCSAPA--NGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTG 169
Query: 153 AVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY---- 206
A ++++ L +S +R VT++G D + + I + E + T+PY
Sbjct: 170 AQVQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSL 223
Query: 207 TYAGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTI 261
+ V S G YGAV P + H P + +T+S
Sbjct: 224 SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTSSQEF 283
Query: 262 GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAES 321
V ++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+
Sbjct: 284 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQY 340
Query: 322 MI 323
+I
Sbjct: 341 LI 342
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 46 EEEPELSVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 100
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED + P
Sbjct: 101 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------SAP 128
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N P + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 129 ANGGTVSRPPV--------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 174
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 175 A--GDLLPNSTERAVTVSG 191
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 93/255 (36%), Gaps = 72/255 (28%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 138 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 195
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 196 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 255
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 256 LSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 314
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL------------SEDTLYSQTMTVPY 206
+ G +R VT+TG+ A LI L S T S + P
Sbjct: 315 --GNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLSAPFSPPL 372
Query: 207 TYAGVFFSGFHGMPY 221
T G G PY
Sbjct: 373 TALPTAPPGLLGAPY 387
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 273 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 329
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 330 GSPVSIALAQYLITACLET 348
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 151/328 (46%), Gaps = 56/328 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +S AR+ +S +RII I+G+ D + R
Sbjct: 18 LRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG-----SCPERIITITGSTDCVFR 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ KL +L A + TK LRL++P S CGS+IGK GA IK + + A
Sbjct: 73 AFTMITHKLEEDLAALVANGTISTKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
I+++ L +S +R VT++G D ++ ++LI + E + T+PY +
Sbjct: 133 IQVAGDLLPNS----TERGVTISGNQDSVIQCVKLICTVILESP--PKGATIPYRPSPSP 186
Query: 209 AGVFFSG--------FHGMP--------------------YGAVPPPVPAVPHNTAAHYG 240
A V +G F P YG +P A H + G
Sbjct: 187 AAVLIAGNQLFDASEFATHPMYSVAQGGLDLQQAYTLQNQYG-IPHSELAKLHQLSMQQG 245
Query: 241 PNMGGRKFQN-----NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
N + + S + + ++ IG ++GR G I EI Q+SGA+IK+
Sbjct: 246 LNPIAQPASTVIPAGMDSNSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKI--- 302
Query: 296 GDFFSGTSERKVTISGPQRSIRTAESMI 323
G GTS+R VTI+G SI A+ +I
Sbjct: 303 GSQLDGTSDRHVTITGTPVSINLAQYLI 330
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 53/207 (25%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+G LRL++ GSIIGK G T+K ++S A R++ S +R++T+TG+
Sbjct: 12 LGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSA-----RVNISEGSCPERIITITGS 66
Query: 178 LDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
D RA +I KL ED A + +G + PPV
Sbjct: 67 TDCVFRAFTMITHKLEED------------LAALVANGTI-----STKPPV--------- 100
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD 297
+L + + G ++G+GG I EI + +GA+I+V+ GD
Sbjct: 101 --------------------TLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVA--GD 138
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIM 324
++ER VTISG Q S+ +I
Sbjct: 139 LLPNSTERGVTISGNQDSVIQCVKLIC 165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T+ P +R ++ G++IGKGG+ I + + +GA+IQ+ + + P +T+R + ISG
Sbjct: 96 TKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV--AGDLLPNSTERGVTISGN 153
Query: 91 IDEILRAVDLVIDKLL 106
D +++ V L+ +L
Sbjct: 154 QDSVIQCVKLICTVIL 169
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDHSYYGLNDRLVTLT 175
D ++T L++PN GSIIG+ G I S A IKI S+LD G +DR VT+T
Sbjct: 262 DSNSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD----GTSDRHVTIT 317
Query: 176 GTLDEQMRALELI--LLKLSEDTLYSQTMTVP 205
GT A LI L+ ++ T + T+ P
Sbjct: 318 GTPVSINLAQYLITSCLETAKSTAQAATLAAP 349
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
L+ N L G++IG+ G+ IN+ + SGA+I++ + GT+DR + I+GT I A
Sbjct: 270 ELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD---GTSDRHVTITGTPVSINLA 326
Query: 98 VDLVIDKLLT 107
L+ L T
Sbjct: 327 QYLITSCLET 336
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P ++H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSMVPGLDPGTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 152/336 (45%), Gaps = 63/336 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S +RI+ I+G D I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGS-----CPERIVTITGPTDAIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++A V +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM-------TVP 205
++++ L +S +R VT++GT D ++ ++ I + + E T+ + P
Sbjct: 134 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAP 189
Query: 206 YTYAG-------------------------------VFFSGFHGMPYGAVPPPVPAVPHN 234
+AG F F A+P P H
Sbjct: 190 IIFAGGQVRADTILASAGNHTELRLSYLTDLCLNCACCFQAFTIQGQYAIPHPDLTKLHQ 249
Query: 235 TAAHYGP-------NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISG 287
A + P G ++ LTI ++ IG ++GR G I EI Q+SG
Sbjct: 250 LAMQHPPFTPLGQTTPGFPGLDATTPTSSHELTI--PNDLIGCIIGRQGSKINEIRQMSG 307
Query: 288 ARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
A+IK+++ + G++ER+VTI+G +I A+ +I
Sbjct: 308 AQIKIANATE---GSAERQVTITGSPANISLAQYLI 340
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V + +L
Sbjct: 155 PDAIIQCVKQICVVML 170
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A SMI
Sbjct: 26 KEVGSIIGKKGETVKKMREESGARINISE-----GSCPERIVTITGPTDAIFKAFSMIAL 80
Query: 326 K 326
K
Sbjct: 81 K 81
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 60 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 114
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 115 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 174
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 175 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 228
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 229 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSAQTSSQEFLV 288
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 289 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 345
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 53/317 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +SGARI +S + +RI+ I+G + I R
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-----SSPERIVTITGATEAIFR 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ A V +K LRL+ P S CGS+IGK G+ IK + + A
Sbjct: 74 AFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGT---LDEQMRALELILLK------------------ 191
++++ L S +R VT++GT + + +R + ++L+
Sbjct: 134 VQVAGDMLPDS----TERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRPKAVTVG 189
Query: 192 -----LSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGR 246
+ + ++ + YT+A + H + +P P + P G
Sbjct: 190 VHAVLAPQQSAHAFAIPGQYTFAHQDLTKLHQLAMQHIPLP-------SLGQSNPTFPGL 242
Query: 247 KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERK 306
+ T+S + + ++ IG ++GR G I EI Q+SGA IK++ D G++ R+
Sbjct: 243 ----DPSAPTSSQEMAIPNDFIGCIIGRQGSKINEIRQVSGAHIKIASTTD---GSAVRQ 295
Query: 307 VTISGPQRSIRTAESMI 323
VTI+G SI A+ +I
Sbjct: 296 VTITGSPASINVAQYLI 312
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS ++ P +R + G++IGKGGS I + + +GA++Q++ + P +T+R +
Sbjct: 93 SSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAG--DMLPDSTERAVT 150
Query: 87 ISGTIDEILRAVDLVIDKLL 106
ISGT I + V + +L
Sbjct: 151 ISGTPQAITQCVRHICSVML 170
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ + ER VTI+G +I A +MI Q
Sbjct: 26 KEVGSIIGKKGETVKKMREESGARINISE-----GSSPERIVTITGATEAIFRAFAMIAQ 80
Query: 326 K 326
K
Sbjct: 81 K 81
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSTNQGFSVQGQYGAVAPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N + P + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 ANGGSVSRPPV--------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|85838458|gb|ABC86135.1| nova [Paracentrotus lividus]
Length = 553
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 25 SLSSDPTEKPTYI-RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
+L P + YI + L+ + AG++IGKGG TI Q +G ++LS++++F+PGT +R
Sbjct: 63 NLGPGPVDDNKYILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQER 122
Query: 84 IIMISGTIDEILRAVDLVIDKLL--TELHAEDQADDVGTKTKLR---LIVPNSSCGSIIG 138
+ +++G ++ + V++K+ +L + A+ + + + R ++VPNS+ G IIG
Sbjct: 123 VALLTGPVESLNNVAVFVLEKIKESPQLGVKAGAETITSPERARQVKIVVPNSTAGLIIG 182
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
K GA IKS M+ S + ++IS+ L++R++T++G + +A+ I+ K+ ED
Sbjct: 183 KGGAMIKSIMEQSGSRVQISQKSDGIT-LSERVITISGEPENNRKAMSFIVNKIQED 238
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 44/204 (21%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+++ GSIIGK G TI D+ +K+S+ + Y G +R+ LTG ++
Sbjct: 76 LKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPVESLNN 135
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+L K+ E + G
Sbjct: 136 VAVFVLEKIKE-----------------------------------------SPQLGVKA 154
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
G +R + I V + G ++G+GG I I + SG+R+++S + D + S
Sbjct: 155 GAETI--TSPERARQVKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGIT-LS 211
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER +TISG + R A S I+ K+
Sbjct: 212 ERVITISGEPENNRKAMSFIVNKI 235
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 59/103 (57%)
Query: 226 PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQI 285
P +P +P P++GG + + L V + +G ++G+GG+ ++E +
Sbjct: 439 PGLPMMPLGATVAGFPSLGGGITMAADPQKESILESEVPETLVGAILGKGGKTLVEFQNL 498
Query: 286 SGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
+GA+I++S + ++ GT R+VTI+GP + + A +IMQ++A
Sbjct: 499 TGAKIQISKKNEYVPGTRNRRVTITGPVTAAQNAHFLIMQRLA 541
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
++++DP +K + + V L GA++GKGG T+ +FQ+ +GA+IQ+S+ +E+ PGT +R
Sbjct: 461 TMAADP-QKESILESEVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRR 519
Query: 85 IMISGTIDEILRAVDLVIDKLLTE 108
+ I+G + A L++ +L E
Sbjct: 520 VTITGPVTAAQNAHFLIMQRLAQE 543
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
DD L + + G ++G+GG+ I ++ + +G +K+S DF+ GT ER ++GP
Sbjct: 70 DDNKYILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGP 129
Query: 313 QRSIRTAESMIMQKV 327
S+ +++K+
Sbjct: 130 VESLNNVAVFVLEKI 144
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A D ++ L VP + G+I+GK G T+ F + + A I+IS+ + G +R VT+
Sbjct: 463 AADPQKESILESEVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRRVTI 522
Query: 175 TGTLDEQMRALELILLKLSED 195
TG + A LI+ +L+++
Sbjct: 523 TGPVTAAQNAHFLIMQRLAQE 543
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 164/347 (47%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPYT-- 207
++++ L +S ++ +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TEQAITIAGMPQSVTECVKQICLVMLETISQSPQGRVMTIPYQPM 186
Query: 208 -------YAGV--FFSGFHGMPYGA---VPPPVPAV---------PHNTA---------A 237
AG +S G P+ PP+ A P + A +
Sbjct: 187 PASSPVICAGGQDRYSNTAGYPHATHDLEGPPLDAYSIQGQHTISPLHLANLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSNSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGTNINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I K++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINAKLS 348
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T++ I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQV--AGDMLPNSTEQAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + +++
Sbjct: 148 IAGMPQSVTECVKQICLVMLETISQ 172
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ E G++ R + I+G+ I A L+ KL
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINAKL 347
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P ++H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPGTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P ++H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|350646767|emb|CCD58488.1| soluble guanylate cyclase gcy, putative [Schistosoma mansoni]
Length = 1102
Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/160 (36%), Positives = 100/160 (62%), Gaps = 5/160 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV N AGA+IGK G I + Q+GAR+++SR+ +F+PGTT+R+ +I GT++ +
Sbjct: 5 HFKILVPNVAAGAIIGKKGEAIETIKRQTGARLKMSRADDFYPGTTERVCLIIGTLEACI 64
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+ D V+ K + Q + T T ++++VP+S+ G IIGK G I+ ++S A I
Sbjct: 65 QLHDYVMAK----ISKRPQNIAIITPTGVKILVPDSTAGIIIGKFGNFIERIKEESNAFI 120
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++S+ L +R + +TG L E+ +A+E+IL K+ E+
Sbjct: 121 QVSQRPKDIR-LFERCIVITGELKERRKAVEMILYKILEN 159
Score = 42.4 bits (98), Expect = 0.29, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
PT ++ LV + AG +IGK G+ I + +S A IQ+S+ + +R I+I+G + E
Sbjct: 86 PTGVKILVPDSTAGIIIGKFGNFIERIKEESNAFIQVSQRPKDIR-LFERCIVITGELKE 144
Query: 94 ILRAVDLVIDKLL 106
+AV++++ K+L
Sbjct: 145 RRKAVEMILYKIL 157
Score = 40.8 bits (94), Expect = 0.93, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+ G I I + +GAR+K+S DF+ GT+ER I G + +M K++
Sbjct: 16 GAIIGKKGEAIETIKRQTGARLKMSRADDFYPGTTERVCLIIGTLEACIQLHDYVMAKIS 75
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 161/336 (47%), Gaps = 65/336 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGMPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSGFHGMPY-----GAVPPP--------------------VPAVPHNTA----AHY 239
A V F+G G Y A+P P P + H ++ A +
Sbjct: 185 APVIFAG--GQAYTIQGQCAIPHPDDACLLSAEYKTALTSTLWRSPQLAHPSSQLKEAAW 242
Query: 240 GPN--MGGRKFQNNKDDRTN----------SLTIGVADEHIGFVVGRGGRNIMEISQISG 287
P G + +N ++ N + + + ++ IG ++GR G I EI Q+SG
Sbjct: 243 RPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSG 302
Query: 288 ARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
A+IK+++ + G++ER++TI+G +I A+ +I
Sbjct: 303 AQIKIANATE---GSTERQITITGSPANISLAQYLI 335
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 25 SLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
S+++ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+
Sbjct: 86 SMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTE 143
Query: 83 RIIMISGTIDEILRAVDLVIDKLL 106
R + ISG D I++ V + +L
Sbjct: 144 RAVTISGMPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+T+R I I+G+ I A
Sbjct: 275 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSTERQITITGSPANISLA 331
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 332 QYLINARLTSEV 343
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P ++H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 153/339 (45%), Gaps = 68/339 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 91 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 145
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 146 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 205
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 206 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 259
Query: 209 AGVFFSGFHGMPYG-----AVPPPVP-----------------------AVPHNTAAHYG 240
V F+G G Y A+P P P P
Sbjct: 260 TPVIFAG--GQAYTIQGQYAIPHPDPLAHGLYQPSAILQLTKLHQLAMQQTPFPPLGQTN 317
Query: 241 PNMGGRKFQNNKDDRTNSLT----------------IGVADEHIGFVVGRGGRNIMEISQ 284
P G K + + +L + + ++ IG ++GR G I EI Q
Sbjct: 318 PAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQ 377
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 378 MSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 413
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 159 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 216
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 217 TERAVTISGTPDAIIQCVKQICVVML 242
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 353 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 409
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 410 QYLINARLTSEV 421
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 98 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 152
Query: 326 K 326
K
Sbjct: 153 K 153
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 155/334 (46%), Gaps = 61/334 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 235 TA---AHYGPNMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
A +H+ G F D +T S + + ++ IG ++GR G I EI Q+SGA+
Sbjct: 245 LAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ 304
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
IK ++ G+++R+VTI+G SI A+ +I
Sbjct: 305 IKTANP---VEGSTDRQVTITGSAASISLAQYLI 335
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+ + E G+TDR + I+
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVE---GSTDRQVTIT 322
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 323 GSAASISLAQYLINVRLSSE 342
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IK + + G DR VT+T
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTA---NPVEGSTDRQVTIT 322
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 323 GSAASISLAQYLINVRLSSET 343
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 148/317 (46%), Gaps = 53/317 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +SGARI +S + +RI+ I+G + I R
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-----SSPERIVTITGPTEGIFR 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ A +V +K LRL+ P S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGT---LDEQMRALELILLK------------------ 191
++++ L S +R VT++GT + + +R + ++L+
Sbjct: 134 VQVAGDMLPDS----TERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRPKVIPAG 189
Query: 192 ---LSEDTLYSQTMTVP--YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGR 246
+ +Q +P Y +A + H + +P P + P G
Sbjct: 190 THAVLAPQHSAQAFAIPGQYAFAHQDLTKLHQLAMQHIPLP-------SLGQSNPTFPGL 242
Query: 247 KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERK 306
+ T+S + + ++ IG ++GR G I EI Q+SGA IK++ D G++ R+
Sbjct: 243 ----DASAPTSSQELAIPNDFIGCIIGRQGSKINEIRQVSGAHIKIASATD---GSAMRQ 295
Query: 307 VTISGPQRSIRTAESMI 323
VTI+G SI A+ +I
Sbjct: 296 VTITGSPASISVAQYLI 312
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 55/207 (26%)
Query: 112 EDQADD--VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
E+ A D + LRL++ GSIIGK G T+K ++S A I IS +
Sbjct: 5 EEMASDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSP-----E 59
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVP 229
R+VT+TG + RA +I K ED +T T + V PPV
Sbjct: 60 RIVTITGPTEGIFRAFSMIAQKFEED------ITAAMTNSNVTSK-----------PPV- 101
Query: 230 AVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
+L + G ++G+GG I EI + +GA+
Sbjct: 102 ----------------------------TLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQ 133
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSI 316
++V+ GD ++ER VTISG ++I
Sbjct: 134 VQVA--GDMLPDSTERAVTISGTPQAI 158
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R + G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQV--AGDMLPDSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
I + V + +L
Sbjct: 155 PQAITQCVRHICSVML 170
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
T +L + + + +G ++G+ G + ++ + SGARI +S+ + ER VTI+GP
Sbjct: 16 TLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-----GSSPERIVTITGPTEG 70
Query: 316 IRTAESMIMQK 326
I A SMI QK
Sbjct: 71 IFRAFSMIAQK 81
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P ++H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 157/346 (45%), Gaps = 73/346 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG--FHGMPYGAVP---------PPVP--------AVPHN--TAAHY-------- 239
V F+G P A PP+P A+PH T H
Sbjct: 185 TPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPF 244
Query: 240 ------GPNMGGRKFQNNKDDRTNSLT----------------IGVADEHIGFVVGRGGR 277
P G K + + +L + + ++ IG ++GR G
Sbjct: 245 PPLGQANPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGT 304
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 305 KINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 347
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 150/310 (48%), Gaps = 38/310 (12%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G I F+ +SGA+I +S +RI+ ++G+ + IL+A L+ K
Sbjct: 5 GSIIGKKGDNIKKFREESGAKINISDG-----SCPERIVTVTGSTEAILKAFSLIARKF- 58
Query: 107 TELHAEDQADDV---GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LD 161
E+ ++ LRLIVP S CGS+IGK G+ IK + +++A I+++ L
Sbjct: 59 EEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKE-IREARASIQVASEMLP 117
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSGFH 217
+S +R VT++GT D + + I + E + T+PY V F+G
Sbjct: 118 NS----TERAVTVSGTADAITKCIYQICCVMMESP--PKGATIPYRPKPAMPPVIFAG-- 169
Query: 218 GMPYG-----AVPPPVPAVPHNTAAHYGPNMGGRKF------QNNKDDRTNSLTIGVADE 266
G Y A+P P H A + P + G T + + + ++
Sbjct: 170 GQAYTVQGQYAIPHPDLTKLHQLALQHAPLLPGHSVGAINPQAAIATASTTTTEMTIPND 229
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
IG ++G+GG I EI Q+SGA IK+S+ + G+ +R VTISG +I A+ +I
Sbjct: 230 LIGCIIGKGGSKINEIRQLSGATIKISNSEE---GSKDRTVTISGTPEAINLAQYLINTS 286
Query: 327 VAYASDRLMD 336
+ + +D
Sbjct: 287 MELHKNLTLD 296
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N L G +IGKGGS IN+ + SGA I++S S E G+ DR + ISGT + I A L
Sbjct: 226 IPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEE---GSKDRTVTISGTPEAINLAQYL 282
Query: 101 VIDKLLTELH 110
+ + ELH
Sbjct: 283 INTSM--ELH 290
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G++IGKGGS I + + AR + + E P +T+R + +SGT D
Sbjct: 76 PVTLRLIVPASQCGSLIGKGGSKIKEIRE---ARASIQVASEMLPNSTERAVTVSGTADA 132
Query: 94 ILRAV 98
I + +
Sbjct: 133 ITKCI 137
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G NI + + SGA+I +SD ER VT++G +I A S+I +
Sbjct: 2 QEVGSIIGKKGDNIKKFREESGAKINISD-----GSCPERIVTVTGSTEAILKAFSLIAR 56
Query: 326 K 326
K
Sbjct: 57 K 57
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPAAQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER +TI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHITITGSPVSIALAQYLI 305
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N + P + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 ANGGSVSRPPV--------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R +T+TG+
Sbjct: 278 --GNQAEGAGERHITITGS 294
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R I I+
Sbjct: 236 DPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHITIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|26346528|dbj|BAC36915.1| unnamed protein product [Mus musculus]
Length = 403
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 144/302 (47%), Gaps = 31/302 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R VT++G D A+ L + ++ L S + T+PY
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPD----AIILCVRQICAVILGSPPKGATIPYHPSL 186
Query: 207 TYAGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTI 261
+ V S G YGAV P + H P + +T+S
Sbjct: 187 SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEF 246
Query: 262 GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAES 321
V ++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+
Sbjct: 247 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQY 303
Query: 322 MI 323
+I
Sbjct: 304 LI 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N + P + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 ANGGSVSRPPV--------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILGSPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 157/346 (45%), Gaps = 73/346 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG--FHGMPYGAVP---------PPVP--------AVPHN--TAAHY-------- 239
V F+G P A PP+P A+PH T H
Sbjct: 217 TPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPF 276
Query: 240 ------GPNMGGRKFQNNKDDRTNSLT----------------IGVADEHIGFVVGRGGR 277
P G K + + +L + + ++ IG ++GR G
Sbjct: 277 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGT 336
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 337 KINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 379
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 319 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 375
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 376 QYLINARLTSEV 387
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 150/344 (43%), Gaps = 74/344 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++ AG++IGK G + F+ SGA+I +S S +RI+ ++GT D+I +
Sbjct: 4 LRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDS-----SCPERIVTVTGTTDQIFK 58
Query: 97 AVDLVIDKLLTEL-HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A ++ K ++ + + LRLIVP S CGS+IGK GA IK + + A I
Sbjct: 59 AFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIRELTGASI 118
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM-----------TV 204
+++ +R VT++G D + + I + E T+ +
Sbjct: 119 QVA--SEMLPNSTERAVTVSGQADAITQCIYNICCVMLESPPKGATIPYRPKPCVPPVML 176
Query: 205 PYTYAGVFFS--------------------GFHGMPYGAVPPPV---------------- 228
P + G FS H +P +PPP
Sbjct: 177 PSSCGGQAFSIQGQQILLPPSHPNATQPDVSPHCVP---LPPPCFISLRARLQTHSLICI 233
Query: 229 ------PAVPHNTAA---HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNI 279
P + AA + P G N +T+ +TI ++ IG ++GRGG I
Sbjct: 234 IIRDVYPGMNAAMAAGIPQFAPRQAGPG--ANMSAQTHEMTI--PNDLIGCIIGRGGAKI 289
Query: 280 MEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
EI Q+SGA IK+++ + G+S+RKVTI G +I A+ MI
Sbjct: 290 NEIRQLSGATIKIANADE---GSSDRKVTIMGSLETIHAAQYMI 330
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 157/346 (45%), Gaps = 73/346 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG--FHGMPYGAVP---------PPVP--------AVPHN--TAAHY-------- 239
V F+G P A PP+P A+PH T H
Sbjct: 217 TPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPF 276
Query: 240 ------GPNMGGRKFQNNKDDRTNSLT----------------IGVADEHIGFVVGRGGR 277
P G K + + +L + + ++ IG ++GR G
Sbjct: 277 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGT 336
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 337 KINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 379
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 319 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 375
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 376 QYLINARLTSEV 387
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P+ G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSTLSHHPQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 157/346 (45%), Gaps = 73/346 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG--FHGMPYGAVP---------PPVP--------AVPHN--TAAHY-------- 239
V F+G P A PP+P A+PH T H
Sbjct: 217 TPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPF 276
Query: 240 ------GPNMGGRKFQNNKDDRTNSLT----------------IGVADEHIGFVVGRGGR 277
P G K + + +L + + ++ IG ++GR G
Sbjct: 277 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGT 336
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 337 KINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 379
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 319 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 375
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 376 QYLINARLTSEV 387
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 157/346 (45%), Gaps = 73/346 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG--FHGMPYGAVP---------PPVP--------AVPHN--TAAHY-------- 239
V F+G P A PP+P A+PH T H
Sbjct: 185 TPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPL 244
Query: 240 ------GPNMGGRKFQNNKDDRTNSLT----------------IGVADEHIGFVVGRGGR 277
P G K + + +L + + ++ IG ++GR G
Sbjct: 245 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGT 304
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 305 KINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 347
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 157/346 (45%), Gaps = 73/346 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG--FHGMPYGAVP---------PPVP--------AVPHN--TAAHY-------- 239
V F+G P A PP+P A+PH T H
Sbjct: 185 TPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPF 244
Query: 240 ------GPNMGGRKFQNNKDDRTNSLT----------------IGVADEHIGFVVGRGGR 277
P G K + + +L + + ++ IG ++GR G
Sbjct: 245 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGT 304
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 305 KINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 347
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 144/303 (47%), Gaps = 33/303 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK----LRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
AV ++ KL +L + + GT ++ LRL++P S CGS+IGKAG IK + +
Sbjct: 75 AVSMIAFKLDEDLCSAPA--NGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTG 132
Query: 153 AVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY---- 206
A ++++ L +S +R VT++G D + + I + E + T+PY
Sbjct: 133 AQVQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSL 186
Query: 207 TYAGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD--RTNSLT 260
+ V S G YG V P + H P G D +T+S
Sbjct: 187 SLGTVLLSANQGFSVQSQYGGVTPAEVTKLQQLSGHAVP-FGSPSMVPGLDPGAQTSSQE 245
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
V ++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+
Sbjct: 246 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQ 302
Query: 321 SMI 323
+I
Sbjct: 303 YLI 305
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED + P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------SAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N P + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 ANGGTVSRPPV--------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V ++ TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQSQYGGVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFGSPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTEL-HAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCSATANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMG-GRKFQNNKDDRTNSLTIGV 263
V S G YGAV P + H P G + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPGMVPGLDPGAQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPGMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 161/336 (47%), Gaps = 65/336 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGMPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPP--------------------VPAVPHNTA----AHY 239
A V F+G G Y A+P P P + H ++ A +
Sbjct: 185 APVIFAG--GQAYTIQGQYAIPHPDDACLLSAEYKTALTSTLWRSPQLAHPSSQLKEAAW 242
Query: 240 GPN--MGGRKFQNNKDDRTN----------SLTIGVADEHIGFVVGRGGRNIMEISQISG 287
P G + +N ++ N + + + ++ IG ++GR G I EI Q+SG
Sbjct: 243 RPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSG 302
Query: 288 ARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
A+IK+++ + G++ER++TI+G +I A+ +I
Sbjct: 303 AQIKIANATE---GSTERQITITGSPANISLAQYLI 335
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 25 SLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
S+++ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+
Sbjct: 86 SMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTE 143
Query: 83 RIIMISGTIDEILRAVDLVIDKLL 106
R + ISG D I++ V + +L
Sbjct: 144 RAVTISGMPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+T+R I I+G+ I A
Sbjct: 275 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSTERQITITGSPANISLA 331
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 332 QYLINARLTSEV 343
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 157/343 (45%), Gaps = 77/343 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +S AR+ +S +RII I+G+ D + R
Sbjct: 29 LRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG-----SCPERIITITGSTDSVFR 83
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ KL +L A + +K LRL++P S CGS+IGK GA IK + + A
Sbjct: 84 AFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQ 143
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
I+++ L +S +R VT++G D ++ ++LI + E + T+PY +
Sbjct: 144 IQVAGDLLPNS----TERGVTISGNQDSVIQCVKLICTVILESP--PKGATIPYRPTPSP 197
Query: 209 AGVFFSGF--------------------------------HGMPY-------------GA 223
A + +G +G+P+ G
Sbjct: 198 AALLIAGNQVFEASDFAPHPLYSVTQGGLDLQQAYALQNQYGIPHSELAKLHQLSVQQGL 257
Query: 224 VPPPVPA---VPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIM 280
P PA +P H+ P+ Q +++ + + ++ IG ++GR G I
Sbjct: 258 SPIAQPASTIMPGKLLLHFLPSGMDSTSQTSQE-------LLIPNDLIGSIIGRQGTKIN 310
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
EI Q+SGA+IK+ + D GTS+R VTI+G SI A+ +I
Sbjct: 311 EIRQVSGAQIKIGSQLD---GTSDRHVTITGTPVSINLAQYLI 350
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 53/206 (25%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+G LRL++ GSIIGK G T+K ++S A R++ S +R++T+TG+
Sbjct: 23 LGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSA-----RVNISEGSCPERIITITGS 77
Query: 178 LDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
D RA +I KL ED G S PPV
Sbjct: 78 TDSVFRAFTMITYKLEED-------LTALVANGTISSK----------PPV--------- 111
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD 297
+L + + G ++G+GG I EI + +GA+I+V+ GD
Sbjct: 112 --------------------TLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVA--GD 149
Query: 298 FFSGTSERKVTISGPQRSIRTAESMI 323
++ER VTISG Q S+ +I
Sbjct: 150 LLPNSTERGVTISGNQDSVIQCVKLI 175
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
++SS P P +R ++ G++IGKGG+ I + + +GA+IQ+ + + P +T+R
Sbjct: 104 TISSKP---PVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV--AGDLLPNSTERG 158
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISG D +++ V L+ +L
Sbjct: 159 VTISGNQDSVIQCVKLICTVIL 180
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 63/146 (43%), Gaps = 30/146 (20%)
Query: 104 KLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDH 162
KLL LH D ++T L++PN GSIIG+ G I S A IKI S+LD
Sbjct: 271 KLL--LHFLPSGMDSTSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD- 327
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELI--LLKLSEDTLYSQTMTVPYTYAGVF-------- 212
G +DR VT+TGT A LI L+ ++ T + TM P F
Sbjct: 328 ---GTSDRHVTITGTPVSINLAQYLITSCLETAKSTAQAATMPSPVDLNMAFTQPASPAA 384
Query: 213 -----------FSGFH--GMPYGAVP 225
+ H G PYGA+P
Sbjct: 385 SPAPTLTTVGTLTPAHVLGTPYGAMP 410
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
L+ N L G++IG+ G+ IN+ + SGA+I++ + GT+DR + I+GT I A
Sbjct: 290 ELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD---GTSDRHVTITGTPVSINLA 346
Query: 98 VDLVIDKLLT 107
L+ L T
Sbjct: 347 QYLITSCLET 356
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 140/300 (46%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YG V P + H P + +T+S V
Sbjct: 189 GTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----GT-----KTKLR- 125
I+ V + +L T L + +Q V GT TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 151/330 (45%), Gaps = 61/330 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEGN-----CPERIVTITGPTDAIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G + ++ ++ I + L E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGAPEAIIQCVKQICVVLLESP--PKGATIPYRPKPAS 186
Query: 209 AGVFFSG--FHGMPYGAVPP---------PVP--------AVPH---------------- 233
V FSG P GA P+P A+PH
Sbjct: 187 TPVIFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPF 246
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
P G N T+ LTI ++ IG ++GR G I EI Q+SGA+IK++
Sbjct: 247 TPLGQTTPAFPGLDASNQAS--THELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIA 302
Query: 294 DRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ G+SER++TI+G +I A+ +I
Sbjct: 303 NA---MEGSSERQITITGTPANISLAQYLI 329
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 25 KEVGSIIGKKGETVKKMREDSGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 79
Query: 326 K 326
K
Sbjct: 80 K 80
>gi|1709303|sp|P51513.1|NOVA1_HUMAN RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Onconeural ventral antigen 1; AltName:
Full=Paraneoplastic Ri antigen; AltName: Full=Ventral
neuron-specific protein 1
gi|440878|gb|AAA16022.1| onconeural ventral antigen-1 [Homo sapiens]
Length = 510
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 43/227 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR---SHEFFPGTTDRIIMISGTID 92
+++ L+ + AG++IGKGG TI Q ++GA I+LS+ S +F+PGTT+R+ +I GT+
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTV- 109
Query: 93 EILRAVDLVIDKLLTEL----------------------------------HAEDQADDV 118
E L AV I + + E+ +D +
Sbjct: 110 EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPM 169
Query: 119 GTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
T ++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G
Sbjct: 170 TTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSG 228
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
++ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 229 EPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 275
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS---YYGLNDRLVTLTGTLDE 180
L++++P+ + GSIIGK G TI ++ A IK+S+L S Y G +R+ + GT+ E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTV-E 110
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNT 235
+ A+ + + + + T P + P V P +P+ P T
Sbjct: 111 ALNAVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTT 161
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
+ M R N + I V + G ++G+GG + + + SGA +++S +
Sbjct: 162 KSSPSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK 213
Query: 296 GDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
D + ER VT+SG R A +I+QK+
Sbjct: 214 PDGIN-LQERVVTVSGEPEQNRKAVELIIQKI 244
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 417 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 476
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 477 ITGTPAATQAAQYLITQRITY 497
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 416 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 475
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 476 TITGTPAATQAAQYLITQRITYE 498
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 162 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQ 220
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 221 ERVVTVSGEPEQNRKAVELIIQKI 244
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARI---KVSDRGD 297
P G K N +D L + + G ++G+GG+ I+++ + +GA I K+S D
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKD 93
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQKV 327
F+ GT+ER I G ++ I +K+
Sbjct: 94 FYPGTTERVCLIQGTVEALNAVHGFIAEKI 123
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 422 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 481
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 482 AATQAAQYLITQRIT 496
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 159/337 (47%), Gaps = 69/337 (20%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G ++ + +SGARI +S + +RII ++G + I +A ++IDKL
Sbjct: 7 GSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFKAFAMIIDKLE 61
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDH 162
++++ ++ LRL+VP + CGS+IGK G IK + + A ++++ L +
Sbjct: 62 EDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 121
Query: 163 SYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSG 215
S +R +T+ G ++ E ++ + L++L+ + + MT+PY + V +G
Sbjct: 122 S----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAG 177
Query: 216 FH-------GMPYGA----VPP-------------PVPAVPHNTAA----HYGPNMGGRK 247
G P+ PP P+ N A H+ GG
Sbjct: 178 GQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTG 237
Query: 248 FQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIK 291
F + T+ LTI + IG ++GR G NI EI Q+SGA+IK
Sbjct: 238 FAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINEIRQMSGAQIK 295
Query: 292 VSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 296 IANP---VEGSSGRQVTITGSAASISLAQYLINARLS 329
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 71 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 128
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 129 IAGVPQSVTECVKQICLVMLETLSQ 153
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 241 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 297
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 298 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 331
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 245 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 296
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 297 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 331
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ I + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 4 KEVGSIIGKKGESVKRIREESGARINISE-----GNCPERIITLTGPTNAIFKAFAMIID 58
Query: 326 KV 327
K+
Sbjct: 59 KL 60
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 60/331 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +S ARI +S +RII I+G D + R
Sbjct: 130 LRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGS-----CPERIITITGPTDCVFR 184
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ KL +L A V +K LRL++P S CGS+IGK G+ IK + + A
Sbjct: 185 AFTMITFKLEEDLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQ 244
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G+ D ++ ++LI + E + T+PY T
Sbjct: 245 VQVAGDLLPNS----TEREVTISGSQDAIIQCVKLICTVILESP--PKGATIPYRPSPTP 298
Query: 209 AGVFFSG---FHGMPYGAVPPPVPAVP---------HNTAAHYG-PNMGGRKFQN----- 250
V +G F +G+ P+ +V + +HYG P+ K
Sbjct: 299 GTVLLAGNQVFEASDFGSH--PLFSVAQGGVDLQQTYAVQSHYGIPHSELAKLHQLSMQQ 356
Query: 251 ------------------NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ +T S + + ++ IG ++GR G I EI Q+SGA+IK+
Sbjct: 357 QGLAPISQSATQVLPGGVEANSQTTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKI 416
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ D TS+R VTISG +I A+ +I
Sbjct: 417 GSQID---STSDRHVTISGTPIAINLAQYLI 444
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 53/207 (25%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+G LRL++ GSIIGK G T+K ++S A I IS +R++T+TG
Sbjct: 124 MGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISE-----GSCPERIITITGP 178
Query: 178 LDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
D RA +I KL ED + G S PPV
Sbjct: 179 TDCVFRAFTMITFKLEEDLMA-------LVANGTVTSK----------PPV--------- 212
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD 297
+L + + G ++G+GG I EI + +GA+++V+ GD
Sbjct: 213 --------------------TLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVA--GD 250
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIM 324
++ER+VTISG Q +I +I
Sbjct: 251 LLPNSTEREVTISGSQDAIIQCVKLIC 277
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGKGGS I + + +GA++Q+ + + P +T+R + ISG+
Sbjct: 208 SKPPVTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQV--AGDLLPNSTEREVTISGS 265
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V L+ +L
Sbjct: 266 QDAIIQCVKLICTVIL 281
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
L+ N L G++IG+ G+ IN+ + SGA+I++ + T+DR + ISGT I A
Sbjct: 385 LLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQID---STSDRHVTISGTPIAINLAQ 441
Query: 99 DLVIDKLLT 107
L+ L T
Sbjct: 442 YLITSCLET 450
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 152/321 (47%), Gaps = 48/321 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE-----------DTLYSQT 201
++++ L +S +R VT++GT D ++ ++ I + + E + +
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLEVQSKSPPRGVSRVVAPKP 186
Query: 202 MTVP--------YTYAGVF------FSGFHGMPYGAVP-PPV----PAVPHNTAAHYGPN 242
+ P YT G + + H + P PP+ PA P A
Sbjct: 187 ASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTDRAVPFVR 246
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
+ T+ LTI ++ IG ++GR G I EI Q+SGA+IK+++ + G+
Sbjct: 247 SPWACLDASPPASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GS 301
Query: 303 SERKVTISGPQRSIRTAESMI 323
SER++TI+G +I A+ +I
Sbjct: 302 SERQITITGTPANISLAQYLI 322
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 262 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 318
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 319 QYLINARLTSEV 330
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 163/343 (47%), Gaps = 68/343 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLS--------------ED 195
++++ L +S +R +T+ G ++ E ++ + +++L++S +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLEVSPQAPPKLQCIPWRLKS 186
Query: 196 TLYSQ--------TMTVPYTYAGVFFS-GFHGMPYG--------AVPPPVPAVPHNTA-- 236
++Y Q + + P+T + + G P A+P P H A
Sbjct: 187 SIYPQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQ 246
Query: 237 -AHY---------------GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIM 280
+H+ P + G + +T S + + ++ IG ++GR G I
Sbjct: 247 QSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 306
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 307 EIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 346
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 333
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 334 GSAASISLAQYLINVRLSSE 353
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 333
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 334 GSAASISLAQYLINVRLSSET 354
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 155/328 (47%), Gaps = 57/328 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +S AR+ +S +RII I+G+ D + R
Sbjct: 18 LRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGS-----CPERIITITGSTDSVFR 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ KL +L A + +K LRL++P S CGS+IGK GA IK + + A
Sbjct: 73 AFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
I+++ L +S +R VT++G D ++ ++LI + E + T+PY +
Sbjct: 133 IQVAGDLLPNS----TERGVTISGNQDSVIQCVKLICTVILESP--PKGATIPYRPSPSP 186
Query: 209 AGVFFSG---FHGMPYGAVPPPVPAV---------PHNTAAHYG-PNMGGRKFQNNKDDR 255
A + +G F + P P+ +V + YG P+ K +
Sbjct: 187 AALLIAGNQVFEASEFA--PHPLYSVAQGGLDLQQAYTLQNQYGIPHSELAKLHQLSVQQ 244
Query: 256 -----------------TNSLT---IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
+NS T + + ++ IG ++GR G I EI Q+SGA+IK+
Sbjct: 245 GLSPIAQPASAVIPGMDSNSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKI--- 301
Query: 296 GDFFSGTSERKVTISGPQRSIRTAESMI 323
G GTS+R VTI+G SI A+ +I
Sbjct: 302 GSQLDGTSDRHVTITGTPVSINLAQYLI 329
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 53/207 (25%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+G LRL++ GSIIGK G T+K ++S A R++ S +R++T+TG+
Sbjct: 12 LGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSA-----RVNISEGSCPERIITITGS 66
Query: 178 LDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
D RA +I KL ED G S PPV
Sbjct: 67 TDSVFRAFTMITYKLEED-------LTALVANGTISS----------KPPV--------- 100
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD 297
+L + + G ++G+GG I EI + +GA+I+V+ GD
Sbjct: 101 --------------------TLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVA--GD 138
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIM 324
++ER VTISG Q S+ +I
Sbjct: 139 LLPNSTERGVTISGNQDSVIQCVKLIC 165
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
++SS P P +R ++ G++IGKGG+ I + + +GA+IQ+ + + P +T+R
Sbjct: 93 TISSKP---PVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV--AGDLLPNSTERG 147
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISG D +++ V L+ +L
Sbjct: 148 VTISGNQDSVIQCVKLICTVIL 169
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
L+ N L G++IG+ G+ IN+ + SGA+I++ + GT+DR + I+GT I A
Sbjct: 269 ELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD---GTSDRHVTITGTPVSINLA 325
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRL 126
L+ L T + QA +G+ L +
Sbjct: 326 QYLITSCLETA-KSTAQAASMGSPVDLNM 353
>gi|355707685|gb|AES03033.1| neuro-oncological ventral antigen 2 [Mustela putorius furo]
Length = 171
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 101/168 (60%), Gaps = 14/168 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 6 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 64
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 65 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 124
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K
Sbjct: 125 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQK 171
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 38/203 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P + P
Sbjct: 67 VHSFIAEKVRE---IPQAMTKPEVVNIL-------QPQTTMNP----------------- 99
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 100 ----------DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 148
Query: 304 ERKVTISGPQRSIRTAESMIMQK 326
ER VT+SG + A S I+QK
Sbjct: 149 ERVVTVSGEPEQVHKAVSAIVQK 171
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG+ I+++ + +GA IK+S DF+ GT+ER + G ++ S I +KV
Sbjct: 17 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKV 75
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 155/334 (46%), Gaps = 61/334 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMSLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 235 TA---AHYGPNMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
A +H+ G F D +T S + + ++ IG ++ R G I EI Q+SGA+
Sbjct: 245 LAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQ 304
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 IKIANP---VEGSTDRQVTITGSAASISLAQYLI 335
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +I + G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 322
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 323 GSAASISLAQYLINVRLSSE 342
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G II + GA I S A IKI+ + G DR VT+T
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 322
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 323 GSAASISLAQYLINVRLSSET 343
>gi|294657857|ref|XP_460153.2| DEHA2E19492p [Debaryomyces hansenii CBS767]
gi|199432999|emb|CAG88426.2| DEHA2E19492p [Debaryomyces hansenii CBS767]
Length = 347
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 155/338 (45%), Gaps = 58/338 (17%)
Query: 13 DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
+ +G+ +T P + +S+ + Y R LVS +G +IG+ G+ I+ + ++ + +S+
Sbjct: 44 NANGETNTLPSINDNSNSSALINY-RVLVSAKESGCLIGQNGAVIDSIREETNTKAGISK 102
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL---------------LTELHAEDQADD 117
PG+ +RI+ +SGT+D+ +A+ L L +L + +
Sbjct: 103 ---LQPGSHERILTVSGTLDDCAKALSYFAQALCNANIENLVSYSYFPLKQLSSNPCVE- 158
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYY--GLNDRLVTLT 175
G T LRL++PN+ G++IG GA I+ QA IS + + G N+RLV L
Sbjct: 159 -GETTILRLLIPNAQMGTLIGSKGARIQQI----QANYNISMIASKSFLPGSNERLVELQ 213
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
GT+D +L +I L ED FS G Y VP +
Sbjct: 214 GTVDNLYDSLRIISRCLIED-----------------FSSIVGTSY--------YVPKAS 248
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
N ++F NN++ T S I A++ +G ++G+ G I + ++SGA I +SD
Sbjct: 249 NYARNNNQTNKRF-NNQNAVTTS--ISFANDMVGALIGKNGSRIQGVRKVSGATIGISDE 305
Query: 296 GDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
G ER TISG ++ A+S++ + R
Sbjct: 306 ---VEGKPERVFTISGTAHAVEKAKSLLYHNLEREEQR 340
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 156/351 (44%), Gaps = 68/351 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++ G++IGK G I F+ +SGA+I +S +RI+ ++G+ + IL+
Sbjct: 76 VRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDG-----SCPERIVTVTGSTEAILK 130
Query: 97 AVDLVIDKL-----------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
A L+ K L EL + + + LRLIVP S CGS+IGK
Sbjct: 131 AFSLIARKFEEMLSLLCLPVQTVGPTLQELQS-NGSHLPKPPVTLRLIVPASQCGSLIGK 189
Query: 140 AGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
G+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 190 GGSKIKEIREVTGASIQVASEMLPNS----TERAVTVSGTAEAITKCIYQICCVMMESP- 244
Query: 198 YSQTMTVPY----TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGPNMGGRK- 247
+ T+PY V F+G G Y A+P P H A + P + G
Sbjct: 245 -PKGATIPYRPKPAMPPVIFAG--GQAYTVQGQYAIPHPDLTKLHQLALQHAPLLPGHSV 301
Query: 248 ----------FQNNKDDRTNSLT------------IGVADEHIGFVVGRGGRNIMEISQI 285
+ R N+ + + ++ IG ++G+GG I EI Q+
Sbjct: 302 GAINPQALAALATTNNLRPNTAAAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQL 361
Query: 286 SGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
SGA IK+S+ + G+ +R VTISG +I A+ +I + + +D
Sbjct: 362 SGATIKISNSEE---GSKDRTVTISGTPEAINLAQYLINTSMELHKNLTLD 409
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 154/325 (47%), Gaps = 52/325 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKHICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG------------FHGMPYGAVPPPVPAVPHNTA---AHY-------------- 239
+ V F+G + A+P P H A +H+
Sbjct: 185 SPVIFAGGQDRYSTGSDKAYTIQGQYAIPQPDLTKLHQLAVQQSHFPMTHGNTGFSGIES 244
Query: 240 -GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
P + G + +T S + + ++ IG ++G G I EI Q+SGA IK+++
Sbjct: 245 SSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIANT--- 301
Query: 299 FSGTSERKVTISGPQRSIRTAESMI 323
G+++R+VTI+G SI A+ +I
Sbjct: 302 VEGSTDRQVTITGSAASISLAQYLI 326
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG GA I S A+IKI+ ++ G DR VT+T
Sbjct: 257 DASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIA---NTVEGSTDRQVTIT 313
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 314 GSAASISLAQYLINVRLSSET 334
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG G+ IN+ SGA I+++ + E G+TDR + I+
Sbjct: 257 DASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIANTVE---GSTDRQVTIT 313
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 314 GSAASISLAQYLINVRLSSE 333
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 157/344 (45%), Gaps = 71/344 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG------------------------FHGMPYG--------AVPPPVPAVPHNTA 236
+ V F+G G P A+P P H A
Sbjct: 185 SPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLA 244
Query: 237 ---AHYGPNMGGRKFQN--------------NKDDRTNSLTIGVADEHIGFVVGRGGRNI 279
+H+ + G F + +T S + + ++ IG ++GR G I
Sbjct: 245 MQQSHFPMSHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 304
Query: 280 MEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 NEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 345
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 276 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 332
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 333 GSAASISLAQYLI 345
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 149/313 (47%), Gaps = 45/313 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +SGARI +S + +RI+ I+G + I R
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-----SSPERIVTITGPTEGIFR 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ A +V +K LRL+ P S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
++++ L S +R VT++GT + + I + E + T+PY +
Sbjct: 134 VQVAGDMLPDS----TERAVTISGTPQAITQCVRHICSVMLESP--PKGATIPY-RPKIL 186
Query: 213 FSGFHGMPYGAVPPPVPAVP-------------HNTAAHY--GPNMGGRKFQNN------ 251
+G H + A+P H A + P++G Q+N
Sbjct: 187 PAGAHAVLAPQHSAHAFAIPGQYAFAHQDLTKLHQLAMQHIPLPSLG----QSNPTFPGL 242
Query: 252 -KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
T++ + + ++ IG ++GR G I EI Q+SGA IK++ D G++ R+VTI+
Sbjct: 243 DSSASTSTQELAIPNDLIGCIIGRQGSKINEIRQVSGAHIKIASATD---GSAVRQVTIT 299
Query: 311 GPQRSIRTAESMI 323
G SI A+ +I
Sbjct: 300 GSPASISIAQYLI 312
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 55/207 (26%)
Query: 112 EDQADD--VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
E+ A D + LRL++ GSIIGK G T+K ++S A I IS +
Sbjct: 5 EEMASDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSP-----E 59
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVP 229
R+VT+TG + RA +I K ED +T T + V PPV
Sbjct: 60 RIVTITGPTEGIFRAFSMIAQKFEED------ITAAMTNSNVTSK-----------PPV- 101
Query: 230 AVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
+L + G ++G+GG I EI + +GA+
Sbjct: 102 ----------------------------TLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQ 133
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSI 316
++V+ GD ++ER VTISG ++I
Sbjct: 134 VQVA--GDMLPDSTERAVTISGTPQAI 158
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R + G++IGKGGS I + + +GA++Q++ + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAG--DMLPDSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
I + V + +L
Sbjct: 155 PQAITQCVRHICSVML 170
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
T +L + + + +G ++G+ G + ++ + SGARI +S+ + ER VTI+GP
Sbjct: 16 TLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-----GSSPERIVTITGPTEG 70
Query: 316 IRTAESMIMQK 326
I A SMI QK
Sbjct: 71 IFRAFSMIAQK 81
>gi|256089056|ref|XP_002580633.1| soluble guanylate cyclase gcy [Schistosoma mansoni]
Length = 1553
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 98/165 (59%), Gaps = 6/165 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV N AGA+IGK G I + Q+GAR+++SR+ +F+PGTT+R+ +I GT++ +
Sbjct: 5 HFKILVPNVAAGAIIGKKGEAIETIKRQTGARLKMSRADDFYPGTTERVCLIIGTLEACI 64
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ D V+ K+ G +++++VP+S+ G IIGK G I+ ++
Sbjct: 65 QLHDYVMAKISKRPQNIAIITPTGVNCMERHKQVKILVPDSTAGIIIGKFGNFIERIKEE 124
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A I++S+ L +R + +TG L E+ +A+E+IL K+ E+
Sbjct: 125 SNAFIQVSQRPKD-IRLFERCIVITGELKERRKAVEMILYKILEN 168
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + G ++G+ G I I + +GAR+K+S DF+ GT+ER I G +
Sbjct: 8 ILVPNVAAGAIIGKKGEAIETIKRQTGARLKMSRADDFYPGTTERVCLIIGTLEACIQLH 67
Query: 321 SMIMQKVA 328
+M K++
Sbjct: 68 DYVMAKIS 75
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 140/300 (46%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV + H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N + P + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 TNGGSVSRPPV--------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 69/342 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S +RI+ I+G D I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-----SCPERIVTITGPTDAIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++A V +K LRL++P S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIALKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM-------TVP 205
++++ L +S +R VT++GT D ++ ++ I + + E T+ + P
Sbjct: 134 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAP 189
Query: 206 YTYAG--------VFFSGFHGM---PYGA----------VPPP--------------VPA 230
+AG + +G H + P A +P P +P+
Sbjct: 190 IIFAGGQVRADTLLASAGNHAVLAQPQTAPAFTIQGQYAIPHPDVSSMHVLYFLYSLLPS 249
Query: 231 VP--HNTAAHYGP-------NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
+ H A + P G + ++ LTI ++ IG ++GR G I E
Sbjct: 250 LTKLHQLAMQHPPFTPLGQTTPGFPGLDASTPASSHELTI--PNDLIGCIIGRQGSKINE 307
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I Q+SGA+IK+++ + G++ER+VTI+G +I A+ +I
Sbjct: 308 IRQMSGAQIKIANATE---GSAERQVTITGSPANISLAQYLI 346
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V + +L
Sbjct: 155 PDAIIQCVKQICVVML 170
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ GS IN+ + SGA+I+++ + E G+ +R + I+G+ I A
Sbjct: 286 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE---GSAERQVTITGSPANISLA 342
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRL 126
+I+ L Q V T L +
Sbjct: 343 -QYLINASLEMAKVSTQTASVTTPVDLNM 370
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A SMI
Sbjct: 26 KEVGSIIGKKGETVKKMREESGARINISE-----GSCPERIVTITGPTDAIFKAFSMIAL 80
Query: 326 K 326
K
Sbjct: 81 K 81
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 144/339 (42%), Gaps = 71/339 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++ G++IGK G I F+ SGA+I +S +RI+ ++GT + I +
Sbjct: 14 VRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGS-----CPERIVTVTGTTECIHK 68
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++ K +L LRL+VP S CGS+IGK G+ IK + + A I+
Sbjct: 69 AFTMICKKFEEDLQNTPTVPK--PPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQ 126
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS----------------- 199
++ +R VT++GT D A+ L + + L S
Sbjct: 127 VA--SEMLPNSTERAVTVSGTAD----AITLCIQNICSIMLESPPKGATIQYRPKPVVPP 180
Query: 200 ------QTMTVPYTYAGVF-------------FSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
Q TVP GV S H + G P+P +P +
Sbjct: 181 VIFAGGQAYTVPGQMQGVQASEKERLGIPKMELSKLHQLSLGQ---PIPIIPCTSPQLIQ 237
Query: 241 PNMGGRKFQNNKDDR-TNSLT---------------IGVADEHIGFVVGRGGRNIMEISQ 284
M G R TN++ + + ++ IG ++GRGG+ I EI Q
Sbjct: 238 ATMPGLPHMAAAYPRATNTVPQALPAQPQQQQTTTEMAIPNDLIGCIIGRGGQKINEIRQ 297
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+SGA IK+S+ + G +RKVTI+G +I A+ +I
Sbjct: 298 MSGAMIKISNAEE---GAPDRKVTITGTPETIGLAQYLI 333
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N L G +IG+GG IN+ + SGA I++S + E G DR + I+GT + I A L
Sbjct: 276 IPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEE---GAPDRKVTITGTPETIGLAQYL 332
Query: 101 VIDKLLTELH 110
+ + ELH
Sbjct: 333 INTSM--ELH 340
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G NI + + SGA+I +SD ER VT++G I A +MI +
Sbjct: 21 KEVGSIIGKKGDNIKKFREDSGAKINISD-----GSCPERIVTVTGTTECIHKAFTMICK 75
Query: 326 K 326
K
Sbjct: 76 K 76
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 163/359 (45%), Gaps = 69/359 (19%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
+LS DP T IR ++ G++IGK G + F+ +SGA+I +S +RI
Sbjct: 13 NLSDDPAVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDC-----SCPERI 66
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK----LRLIVPNSSCGSIIGKA 140
+ +SG+ I +A L+ K E D+ T+ K +RLIVP S CGS+IGK
Sbjct: 67 VTVSGSRSAIYKAFTLITKKF--EEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKG 124
Query: 141 GATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
G+ IK + + I+++ L +S +R VTL+G+ + + + I + E
Sbjct: 125 GSKIKEIREITGCSIQVASEMLPNS----TERAVTLSGSAEAITQCIYHICCVMLESP-- 178
Query: 199 SQTMTVPY-------------TYAGVFFSGFHGMPY----GAVPPP---------VPAVP 232
+ T+PY G + +P G P A+P
Sbjct: 179 PKGATIPYRPKPQVNGPVIVANGQAYTIQGNYAVPAQEVSGIAKNPLAGLAALGLAGAIP 238
Query: 233 HNT-------------AAHYGPN-----MGGRKFQNNKDD-----RTNSLTIGVADEHIG 269
NT A Y P+ + G + + N + ++ S + V ++ IG
Sbjct: 239 SNTGGLNPTGKYSSPNALEYIPHAALAALAGSQLRTNNNRNVAPVQSQSHEMTVPNDLIG 298
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
++G+GG I EI QISGA I++S+ + SG ++R +TI+G S+ A+ +I +++
Sbjct: 299 CIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLINMRIS 357
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 15 HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
+ R+ APV+S S + T V N L G +IGKGG+ I + + SGA I++S
Sbjct: 275 NNNRNVAPVQSQSHEMT---------VPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCE 325
Query: 75 EFFPGTTDRIIMISGTIDEILRAVDLV 101
E G TDR I I+G D + A L+
Sbjct: 326 ERDSGNTDRTITITGNPDSVALAQYLI 352
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 289 EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALA 348
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 349 QYLINMRISMET------------AGMPIPGYH 369
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 157/347 (45%), Gaps = 75/347 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLES---PKGVTIPYRPKPSS 183
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 184 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 243
Query: 235 TA---AHY---------------GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGG 276
A +H+ P + G + +T S + + ++ IG ++GR G
Sbjct: 244 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 303
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 304 AKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 347
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 278 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 334
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 335 GSAASISLAQYLI 347
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 278 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 334
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTV 204
G+ A LI + L SQ +V
Sbjct: 335 GSAASISLAQYLINVSLENAKPSSQAASV 363
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTGAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L +K LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YG V P + + H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGTVTPAEVSKLQQLSGHPVPFASPSVVPGLDPSAQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G+ ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GSGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 79/199 (39%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+I+ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED
Sbjct: 64 TITGSTGAVFHAVSMIAFKLDEDLC----------------------------------- 88
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
GP GG + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 89 ------TGPPNGG-----SISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 60/202 (29%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG
Sbjct: 98 SKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGV 155
Query: 91 IDEILRAVDLVIDKLL------------------TELHAEDQADDV----GTKT-----K 123
D I+ V + +L T L + +Q V GT T K
Sbjct: 156 PDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGTVTPAEVSK 215
Query: 124 LR----------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
L+ +VPN G +IG+ G+ I S A I
Sbjct: 216 LQQLSGHPVPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 156 KISRLDHSYYGLNDRLVTLTGT 177
KI + G +R VT+TG+
Sbjct: 276 KI---GNQAEGSGERHVTITGS 294
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G+ +R + I+
Sbjct: 236 DPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GSGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 157/345 (45%), Gaps = 72/345 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG------------------------FHGMPYG--------AVPPPVPAVPHNTA 236
+ V F+G G P A+P P H A
Sbjct: 185 SPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLA 244
Query: 237 ---AHYGPNMGGRKFQN---------------NKDDRTNSLTIGVADEHIGFVVGRGGRN 278
+H+ + G F + +T S + + ++ IG ++GR G
Sbjct: 245 MQQSHFPMSHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAK 304
Query: 279 IMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 INEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 346
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 333
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 334 GSAASISLAQYLI 346
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 140/285 (49%), Gaps = 21/285 (7%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK GSTI F+ +S A I +S T +RI+ ++GT D ++ A L+ KL
Sbjct: 39 GSIIGKEGSTIKQFRQESNAHINISDGS-----TPERIVSVTGTKDAVVTAFALIGQKLE 93
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
EL + +++ T LRLIVP S CGSIIGK GA IK + S A + ++ G
Sbjct: 94 DELKSNSKSNTTPPVT-LRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVVA--GEFLPG 150
Query: 167 LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT-VPYTYAGVFFSGFHGMPYGAVP 225
++R VTL+GT + ++L+ + E M P+ F GF+G P G
Sbjct: 151 SSERAVTLSGTPEALETCIDLLCGVMIEFPPRGHPMPYTPHKLQQQF--GFYGPPQGFGY 208
Query: 226 PPVPAVPHNTAAHY-------GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRN 278
P +PH + G G+ + S T+ + +G ++G+ G
Sbjct: 209 PGPYGMPHAFPNGFMAGRGPYGGGRKGKGPPPPQPGPITSHTMTILKGAVGSIIGQKGSY 268
Query: 279 IMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I I Q+SGA IK+ GD +G +R+V I+G ++ A+ +I
Sbjct: 269 ITGIRQMSGASIKI---GDSENGDDKREVLITGTAEAVGLAQFLI 310
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 16 GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
G++ +KS S T P +R +V G++IGKGG+ I + + SGA + + + E
Sbjct: 89 GQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVV--AGE 146
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
F PG+++R + +SGT + + +DL+ ++
Sbjct: 147 FLPGSSERAVTLSGTPEALETCIDLLCGVMI 177
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 157/348 (45%), Gaps = 73/348 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG--------------------------FHGMPYG--------AVPPPVPAVP 232
+ + V F+G G P A+P P
Sbjct: 187 SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKL 246
Query: 233 HNTA---AHYGPNMGGRKFQN--------------NKDDRTNSLTIGVADEHIGFVVGRG 275
H A +H+ G F + +T S + + ++ IG ++GR
Sbjct: 247 HQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQ 306
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 307 GAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 351
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 282 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 338
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 339 GSAASISLAQYLINVRLSSE 358
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 282 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 338
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 339 GSAASISLAQYLINVRLSSET 359
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 156/346 (45%), Gaps = 73/346 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 82
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 83 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 142
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 143 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 196
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 197 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 256
Query: 235 TA---AHYGPNMGGRKFQN--------------NKDDRTNSLTIGVADEHIGFVVGRGGR 277
A +H+ G F + +T S + + ++ IG ++GR G
Sbjct: 257 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGA 316
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 317 KINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 359
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 290 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 346
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 347 GSAASISLAQYLINVRLSSE 366
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 290 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 346
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 347 GSAASISLAQYLINVRLSSET 367
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 35 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 89
Query: 326 KV 327
K+
Sbjct: 90 KL 91
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 158/339 (46%), Gaps = 67/339 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG---------------------------------FHGM-----PYGAVPPPVPA 230
+ V F+G HG Y A+P P
Sbjct: 185 SPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYIIQGQY-AIPQPDLT 243
Query: 231 VPHNTA---AHYG-PNMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
H A +H+ + G F D +T S + + ++ IG ++GR G I EI Q
Sbjct: 244 KLHQLAMQQSHFPMSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 303
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 304 MSGAQIKIANP---VEGSNDRQVTITGSTASISLAQYLI 339
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G NDR VT+T
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSNDRQVTIT 326
Query: 176 GTLDEQMRALELILLKLSED 195
G+ A LI ++LS +
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+ DR + I+
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSNDRQVTIT 326
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A SMI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFSMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 158/339 (46%), Gaps = 67/339 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG---------------------------------FHGM-----PYGAVPPPVPA 230
+ V F+G HG Y A+P P
Sbjct: 185 SPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQY-AIPQPDLT 243
Query: 231 VPHNTA---AHYG-PNMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
H A +H+ + G F D +T S + + ++ IG ++GR G I EI Q
Sbjct: 244 KLHQLAMQQSHFPMSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 303
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 304 MSGAQIKIANP---VEGSNDRQVTITGSTASISLAQYLI 339
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G NDR VT+T
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSNDRQVTIT 326
Query: 176 GTLDEQMRALELILLKLSED 195
G+ A LI ++LS +
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+ DR + I+
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSNDRQVTIT 326
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A SMI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFSMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG------------------------FHGMPYG--------AVPPPVPAVPHNTA 236
+ V F+G G P A+P P H A
Sbjct: 185 SPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLA 244
Query: 237 ---AHYGPNMGGRKF----QNNKDDR-----------TNSLTIGVADEHIGFVVGRGGRN 278
+H+ + G F ++ D++ T S + + ++ IG ++GR G
Sbjct: 245 MQQSHFPMSHGNTGFSGVESSSPDEKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAK 304
Query: 279 IMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 INEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 346
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 333
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 334 GSAASISLAQYLINVRLSSE 353
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 333
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 334 GSAASISLAQYLINVRLSSET 354
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 158/339 (46%), Gaps = 67/339 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG---------------------------------FHGM-----PYGAVPPPVPA 230
+ V F+G HG Y A+P P
Sbjct: 185 SPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQY-AIPQPDLT 243
Query: 231 VPHNTA---AHYG-PNMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
H A +H+ + G F D +T S + + ++ IG ++GR G I EI Q
Sbjct: 244 KLHQLAMQQSHFPMSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 303
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 304 MSGAQIKIANP---VEGSNDRQVTITGSTASISLAQYLI 339
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G NDR VT+T
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSNDRQVTIT 326
Query: 176 GTLDEQMRALELILLKLSED 195
G+ A LI ++LS +
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+ DR + I+
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSNDRQVTIT 326
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A SMI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFSMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 158/349 (45%), Gaps = 74/349 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG--------------------------FHGMPYG--------AVPPPVPAVP 232
+ + V F+G G P A+P P
Sbjct: 187 SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKL 246
Query: 233 HNTA---AHY---------------GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
H A +H+ P + G + +T S + + ++ IG ++GR
Sbjct: 247 HQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGR 306
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 307 QGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 352
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 283 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 339
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 340 GSAASISLAQYLINVRLSSE 359
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 283 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 339
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 340 GSAASISLAQYLINVRLSSET 360
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 159/358 (44%), Gaps = 67/358 (18%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
K++ +D + IR ++ G++IGK G + F+ +SGA+I +S +R
Sbjct: 6 KNMINDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPER 60
Query: 84 IIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT--------KTKLRLIVPNSSCGS 135
I+ ++G+ + I +A L+ K ++ D+ + LRLIVP S CGS
Sbjct: 61 IVTVTGSTNAIFKAFTLICKKF-------EEFQDINSGGSGVPRPPITLRLIVPASQCGS 113
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+IGK G+ IK + + A I+++ +R VT++GT + + + I + E
Sbjct: 114 LIGKGGSKIKEIREVTGASIQVA--SEMLPNSTERAVTISGTGEAITQCIYHICTVMLES 171
Query: 196 TLYSQTMTVPY-----TYAGVFFSGFHGMPYG-----AVPP----------PVPAVPHNT 235
+ T+PY V +G G Y AVP P+ +
Sbjct: 172 P--PKGATIPYRPKPQVGGPVILAG--GQAYTIQGNYAVPAHTDMSALGKSPLAGLAALG 227
Query: 236 AAHYGP-NMGG------------------RKFQNNKDDRTNSLTIGVADEHIGFVVGRGG 276
P N GG + Q N + +T+ +T V +E IG ++G+GG
Sbjct: 228 LGGLAPTNTGGLNPAALAALAGSQLRTSNSRNQQNSNQQTHEMT--VPNELIGCIIGKGG 285
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
I EI QISGA I++S+ D SG ++R +TISG ++ A+ +I V L
Sbjct: 286 TKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQYLINMSVELQKANL 343
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA--- 97
V N L G +IGKGG+ I + + SGA I++S + G TDR I ISG D + A
Sbjct: 272 VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQYL 331
Query: 98 VDLVIDKLLTELHAED 113
+++ ++ L A++
Sbjct: 332 INMSVELQKANLEAQN 347
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS D G+ DR +T++G D A
Sbjct: 270 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQ 329
Query: 186 ELILL--KLSEDTLYSQ 200
LI + +L + L +Q
Sbjct: 330 YLINMSVELQKANLEAQ 346
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 157/347 (45%), Gaps = 74/347 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 235 TA---AHY---------------GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGG 276
A +H+ P + G + +T S + + ++ IG ++GR G
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 304
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 AKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 348
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 335
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 336 GSAASISLAQYLI 348
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 156/346 (45%), Gaps = 73/346 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 235 TA---AHYGPNMGGRKFQN--------------NKDDRTNSLTIGVADEHIGFVVGRGGR 277
A +H+ G F + +T S + + ++ IG ++GR G
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGA 304
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 KINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 347
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 278 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 334
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 335 GSAASISLAQYLINVRLSSE 354
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 278 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 334
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 335 GSAASISLAQYLINVRLSSET 355
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 158/349 (45%), Gaps = 74/349 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 82
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 83 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 142
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 143 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 198
Query: 207 TYAGVFFSG--------------------------FHGMPYG--------AVPPPVPAVP 232
+ + V F+G G P A+P P
Sbjct: 199 SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKL 258
Query: 233 HNTA---AHY---------------GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
H A +H+ P + G + +T S + + ++ IG ++GR
Sbjct: 259 HQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGR 318
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 319 QGAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 364
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 295 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 351
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 352 GSAASISLAQYLINVRLSSE 371
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 295 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 351
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 352 GSAASISLAQYLINVRLSSET 372
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 35 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 89
Query: 326 KV 327
K+
Sbjct: 90 KL 91
>gi|336465527|gb|EGO53767.1| hypothetical protein NEUTE1DRAFT_119308 [Neurospora tetrasperma
FGSC 2508]
gi|350295174|gb|EGZ76151.1| eukaryotic type KH-domain (KH-domain type I) [Neurospora
tetrasperma FGSC 2509]
Length = 481
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 169/388 (43%), Gaps = 80/388 (20%)
Query: 15 HGKRSTA--PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
HG RS A PV + D T ++R ++S+P A +IGKGG ++ + S A+ +S
Sbjct: 104 HGARSRAQPPVSAQPHDETAW-IHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVS- 161
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNS 131
++ G +RI+ +SG +D + +A L+I L E AE + +KT LRL++P+
Sbjct: 162 --DYQKGAVERILTVSGVVDAVAKAFGLIIRTLNNEPLAE--PSNTHSKTYPLRLLIPHV 217
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL----EL 187
GSIIGK GA IK + S A + S D +R + + G D A
Sbjct: 218 LIGSIIGKGGARIKEIQEASGARLNAS--DSCLPLSTERSLVVMGVADAVHIATYYVGST 275
Query: 188 ILLKLSE------------------DTLYSQTMTVPYT--YAGVFFSG------------ 215
+L +L+E ++ VPY AG F
Sbjct: 276 LLEQLNERFGGPAASAYATRSGGPAASIPGGLQVVPYVPQPAGGNFGNRDYYQRNRGPDP 335
Query: 216 --FHGM-------PYGAVPP--PVPAVP-----------HNTAAHYGPNMGGRKFQNNKD 253
HGM PYGA P P PAVP A H P++G +
Sbjct: 336 RSHHGMPPSQYPAPYGAPHPAQPNPAVPMHYGAHAAGGYGAAAPHVAPHVGHAGPAPHAA 395
Query: 254 DRTNSLTIGVA--------DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+ G A ++ +G ++G+GG+ I EI QISG+ IK+++ D ++ER
Sbjct: 396 GPHGAPVAGAALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNER 452
Query: 306 KVTISGPQRSIRTAESMIMQKVAYASDR 333
VTI+G + R A ++ Q++ R
Sbjct: 453 LVTITGTEECNRMALYLLYQRLESEKHR 480
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 77/355 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 82
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 83 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 142
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 143 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 198
Query: 207 TYAGVFFSG--------------------------FHGMPYG--------AVPPPVPAVP 232
+ + V F+G G P A+P P
Sbjct: 199 SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKL 258
Query: 233 HNTA---AHYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVG 273
H A +H+ G F + T+ LTI + IG ++G
Sbjct: 259 HQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIG 316
Query: 274 RGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
R G NI EI Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 317 RQGANINEIRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 368
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 295 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 351
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 352 SAASISLAQYLINARLSSE 370
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 284 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 335
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 336 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 370
>gi|85111179|ref|XP_963814.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|28925551|gb|EAA34578.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|38566984|emb|CAE76284.1| related to hnRNP protein E2 [Neurospora crassa]
Length = 489
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 168/382 (43%), Gaps = 80/382 (20%)
Query: 15 HGKRSTA--PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
HG RS A PV + D T ++R ++S+P A +IGKGG ++ + S A+ +S
Sbjct: 104 HGARSRAQPPVSAQPHDETAW-IHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVS- 161
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNS 131
++ G +RI+ +SG +D + +A L+I L E AE + +KT LRL++P+
Sbjct: 162 --DYQKGAVERILTVSGVVDAVAKAFGLIIRTLNNEPLAE--PSNTHSKTYPLRLLIPHV 217
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL----EL 187
GSIIGK GA IK + S A + S D +R + + G D A
Sbjct: 218 LIGSIIGKGGARIKEIQEASGARLNAS--DSCLPLSTERSLVVMGVADAVHIATYYVGST 275
Query: 188 ILLKLSE------------------DTLYSQTMTVPYT--YAGVFFSG------------ 215
+L +L+E ++ VPY AG F
Sbjct: 276 LLEQLNERFGGPAASAYATRSGGPAASIPGGLQVVPYVPQPAGGNFGNRDYYQRNRGPDP 335
Query: 216 --FHGM-------PYGAVPP--PVPAVP-----------HNTAAHYGPNMGGRKFQNNKD 253
HGM PYGA P P PAVP A H P++G +
Sbjct: 336 RSHHGMPPSQYPAPYGAPHPAQPNPAVPMHYGAHAAGGYGAAAPHVAPHVGHAGPAPHAA 395
Query: 254 DRTNSLTIGVA--------DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+ G A ++ +G ++G+GG+ I EI QISG+ IK+++ D ++ER
Sbjct: 396 GPHGAPVAGAALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNER 452
Query: 306 KVTISGPQRSIRTAESMIMQKV 327
VTI+G + R A ++ Q++
Sbjct: 453 LVTITGTEECNRMALYLLYQRL 474
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTG 176
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TG
Sbjct: 403 AGAALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITG 458
Query: 177 TLDEQMRALELILLKLSE 194
T + AL L+ +L E
Sbjct: 459 TEECNRMALYLLYQRLGE 476
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 157/347 (45%), Gaps = 74/347 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 235 TA---AHY---------------GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGG 276
A +H+ P + G + +T S + + ++ IG ++GR G
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 304
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 AKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 348
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 335
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 336 GSAASISLAQYLINVRLSSE 355
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 335
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 336 GSAASISLAQYLINVRLSSET 356
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 157/351 (44%), Gaps = 83/351 (23%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-------LRLIVPNSSCGSIIGKAGATIKSFMD 149
A ++ K ED + + T LRL+VP S CGS+IGK G+ IK +
Sbjct: 71 AFAMIAYKF-----EEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 150 DSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY- 206
+ A ++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 126 STGAQVQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYR 179
Query: 207 ---TYAGVFFSG--FHGMPYGAVPP---------PVP--------AVPHN--TAAHY--- 239
V F+G P A P+P A+PH T H
Sbjct: 180 PKPASTPVIFAGGQVRADPLAASTANLSLLLQHQPLPAYTIQGQYAIPHPDLTKLHQLAM 239
Query: 240 -----------GPNMGGRKFQNNKDDRTNSLT----------------IGVADEHIGFVV 272
P G K + + +L + + ++ IG ++
Sbjct: 240 QQTPFPPLGQTTPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCII 299
Query: 273 GRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
GR G I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 300 GRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 347
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|358342542|dbj|GAA49985.1| RNA-binding protein Nova [Clonorchis sinensis]
Length = 820
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 56/226 (24%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ LV + GA+IGKGG +I Q ++GARI+LS+ ++F+PGT +R+ +I GT+D + R
Sbjct: 1 MKILVPSGAVGAIIGKGGESIAHVQWETGARIKLSKPNDFYPGTMERVCLIQGTLDGVTR 60
Query: 97 AVDLVIDKLL----------------------------------------TELHAEDQAD 116
+ ++D++L + + QAD
Sbjct: 61 MHNYIMDRMLEKPECAGATGGQTLPGSTSLACPVRPTTGGAIIPTTVGNPSTISTTGQAD 120
Query: 117 ---------------DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
G +++++VPN + G +IGK G+ +K D + A I+IS+
Sbjct: 121 FGASGAWPTVGGSRLPWGRHQQVKILVPNCTAGLVIGKVGSYVKEIKDRTGAFIQISQKS 180
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
+ L +R +T+ G D+ A+ L+L K++ED + T+ Y+
Sbjct: 181 KE-FNLMERCITIAGEPDQCRAAVALVLAKIAEDPQSTSCPTISYS 225
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 30/223 (13%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++++VP+ + G+IIGK G +I ++ A IK+S+ + Y G +R+ + GTLD R
Sbjct: 1 MKILVPSGAVGAIIGKGGESIAHVQWETGARIKLSKPNDFYPGTMERVCLIQGTLDGVTR 60
Query: 184 ALELILLKLSE----------DTLY-SQTMTVPY--TYAGVFFSGFHGMPYGAVPPPVPA 230
I+ ++ E TL S ++ P T G G P
Sbjct: 61 MHNYIMDRMLEKPECAGATGGQTLPGSTSLACPVRPTTGGAIIPTTVGNPS--------T 112
Query: 231 VPHNTAAHYG-----PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQI 285
+ A +G P +GG + + + L V + G V+G+ G + EI
Sbjct: 113 ISTTGQADFGASGAWPTVGGSRLPWGRHQQVKIL---VPNCTAGLVIGKVGSYVKEIKDR 169
Query: 286 SGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
+GA I++S + F+ ER +TI+G R A ++++ K+A
Sbjct: 170 TGAFIQISQKSKEFN-LMERCITIAGEPDQCRAAVALVLAKIA 211
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 34/307 (11%)
Query: 19 STAPVKSLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
S +P +S S P T +R LVS AG +IGKGG + D + Q+G + +S+
Sbjct: 11 SPSPGRSRSGSPAGPDTLTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSK---VV 67
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
PG DR++ ISG++D + +A L++ +L+ + T T LRL++ ++ G+II
Sbjct: 68 PGVHDRVLTISGSVDRVAKAYGLIVAQLVASNPTSPISASSSTHTSLRLLISHNLMGTII 127
Query: 138 GKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
G+ G IK+ D+S A + S+ L S +R+V + G+++ RA++ I L ED
Sbjct: 128 GRGGTRIKAIQDNSGARMVASKDMLPQS----TERVVEVHGSVEAIERAVDDIGKSLLED 183
Query: 196 TLYSQTMTVPYTYAGVFFSG-----------FHGMPYGAVPPPVPAVPHNTAAHYGPNMG 244
+ + AG SG + G P P P A P
Sbjct: 184 WERGLGTVLFHPGAGDERSGSSRRYSENRGSYGGSRQSNGRPGSPGSPSRQAPSS-PQPT 242
Query: 245 GRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE 304
+ QN I + + +G ++GRGG I EI ++SG++I ++ T E
Sbjct: 243 NLRTQN----------ISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAK--APHDETGE 290
Query: 305 RKVTISG 311
R TI G
Sbjct: 291 RMFTIVG 297
>gi|307105952|gb|EFN54199.1| hypothetical protein CHLNCDRAFT_31755 [Chlorella variabilis]
Length = 282
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 40/253 (15%)
Query: 112 EDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL 167
E+ D G + ++ +VPN + GSIIGK+GA I S A +++SR + Y G
Sbjct: 35 EETGSDAGGSREERVVVKFLVPNVAAGSIIGKSGANITEIQTQSNARMQLSRANEFYPGS 94
Query: 168 ---NDRLVTLTGTLDEQMRALELILLKL---SEDTLYSQTMTVPYTYAGVFFSGFHGMPY 221
DR++ ++GT+++ + AL L+L KL SE+ Y +Y+ +
Sbjct: 95 PEGQDRILLVSGTVNQLLTALHLVLSKLKAESENPDYHLLTDANLSYSTRYSP------- 147
Query: 222 GAVPPP---VPAVPHNTAA---------------HYGPNMGG-----RKFQNNKDDRTNS 258
GA PPP PA P + A H GP G S
Sbjct: 148 GASPPPQQYTPAPPAHMAGLGGGGGLGGNAPHMLHLGPGAGAPLPRGGGGGGGGGGAGAS 207
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+TI V ++ +G V+G+ G I +I ++ G I++S +G+F G+ +R +I+G ++
Sbjct: 208 VTIAVPEDKVGVVIGKQGAVINQIKELLGVSIRISKKGEFLPGSHDRACSITGTPEAVEI 267
Query: 319 AESMIMQKVAYAS 331
A+ +I QK+ A+
Sbjct: 268 AQRLIQQKIDAAN 280
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 60/80 (75%), Gaps = 3/80 (3%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT---TDRIIMIS 88
E+ ++FLV N AG++IGK G+ I + Q+QS AR+QLSR++EF+PG+ DRI+++S
Sbjct: 46 EERVVVKFLVPNVAAGSIIGKSGANITEIQTQSNARMQLSRANEFYPGSPEGQDRILLVS 105
Query: 89 GTIDEILRAVDLVIDKLLTE 108
GT++++L A+ LV+ KL E
Sbjct: 106 GTVNQLLTALHLVLSKLKAE 125
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
G VIGK G+ IN + G I++S+ EF PG+ DR I+GT + + A L+ K+
Sbjct: 218 GVVIGKQGAVINQIKELLGVSIRISKKGEFLPGSHDRACSITGTPEAVEIAQRLIQQKI 276
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 140/298 (46%), Gaps = 23/298 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S F +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG-SFL----ERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IG+AG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQ 134
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAG 210
++++ + +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVA--GDLFPNSTERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSLGT 190
Query: 211 VFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGVAD 265
V S G YGAV ++H P + +T+S V +
Sbjct: 191 VLLSANQGFSVQGQYGAVTQREVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPN 250
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS + S+ +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITIS--EGSFL---ERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD F ++ER VT+SG
Sbjct: 138 A--GDLFPNSTERAVTVSG 154
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 103/266 (38%), Gaps = 71/266 (26%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IG+ G+ I + + +GA++Q+ + + FP +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQV--AGDLFPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTQREVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHG 218
+ G +R VT+TG+ + + L++ + + T T G S
Sbjct: 278 --GNQAEGAGERHVTITGS---------PVSIALAQYLITACLETAKSTSGGTPSSAPAD 326
Query: 219 MPYGAVPP--PVPAVPHNTAAHYGPN 242
+P PP +P +P AH P+
Sbjct: 327 LPAPFSPPLTALPQLPLACWAHPMPS 352
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 156/346 (45%), Gaps = 73/346 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG------------------------------------------FHGMPYGAVP- 225
V F+G H + P
Sbjct: 185 TPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPF 244
Query: 226 PPV----PAVPHNT----AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGR 277
PP+ PA P ++ N+ G+ + ++ + + ++ IG ++GR G
Sbjct: 245 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGT 304
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 305 KINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 347
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 157/339 (46%), Gaps = 67/339 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG---------------------------------FHGM-----PYGAVPPPVPA 230
+ V F+G HG Y A+P P
Sbjct: 185 SPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQY-AIPQPDLT 243
Query: 231 VPHNTA---AHYG-PNMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
H A +H+ + G F D + S + + ++ IG ++GR G I EI Q
Sbjct: 244 KLHQLAMQQSHFPMSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQ 303
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 304 MSGAQIKIANP---VEGSNDRQVTITGSTASISLAQYLI 339
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G NDR VT+T
Sbjct: 270 DASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSNDRQVTIT 326
Query: 176 GTLDEQMRALELILLKLSED 195
G+ A LI ++LS +
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+ DR + I+
Sbjct: 270 DASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSNDRQVTIT 326
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A SMI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFSMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 148/320 (46%), Gaps = 61/320 (19%)
Query: 51 GKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
GK G ++ + +SGARI +S + +RII ++G + I +A ++IDKL ++
Sbjct: 22 GKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFKAFAMIIDKLEEDIS 76
Query: 111 AEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYG 166
+ +K LRL+VP S CGS+IGK G IK + + A ++++ L +S
Sbjct: 77 SSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNS--- 133
Query: 167 LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSG------- 215
+R +T+ G + ++ I + + E + +T+PY + + V F+G
Sbjct: 134 -TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSSSPVIFAGGQDRYST 190
Query: 216 -------------------FHGMPYG--------AVPPPVPAVPHNTA---AHYGPNMGG 245
G P A+P P H A +H+ G
Sbjct: 191 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 250
Query: 246 RKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
F D +T S + + ++ IG ++GR G I EI Q+SGA+IK+++ G++
Sbjct: 251 TGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGST 307
Query: 304 ERKVTISGPQRSIRTAESMI 323
+R+VTI+G SI A+ +I
Sbjct: 308 DRQVTITGSAASISLAQYLI 327
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 82 STAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 139
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 140 IAGIPQSIIECVKQICVVML 159
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 258 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 314
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 315 GSAASISLAQYLI 327
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 258 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 314
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTV 204
G+ A LI + L SQ +V
Sbjct: 315 GSAASISLAQYLINVSLENAKPSSQAASV 343
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 156/346 (45%), Gaps = 73/346 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG------------------------------------------FHGMPYGAVP- 225
V F+G H + P
Sbjct: 217 TPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPELTKLHQLAMQQTPF 276
Query: 226 PPV----PAVPHNT----AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGR 277
PP+ PA P ++ N+ G+ + ++ + + ++ IG ++GR G
Sbjct: 277 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGT 336
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 337 KINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 379
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 319 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 375
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 376 QYLINARLTSEV 387
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 231 VPHNTAA----HYGPNMGGRKFQNNKDDRTNSLTIGVA----DEHIGFVVGRGGRNIMEI 282
+PH T + H P+ G RK ++ + ++T+ + + +G ++G+ G + ++
Sbjct: 13 LPHGTLSTLSHHLQPHFG-RKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKM 71
Query: 283 SQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 72 REESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 135/294 (45%), Gaps = 40/294 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
++++ L +S +R VT++G D + + I V
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQI--------------------CAVI 170
Query: 213 FSGF--HGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGVADEHIG 269
GF G YGAV P + H P + +T+S V ++ IG
Sbjct: 171 LEGFSVQGQ-YGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIG 229
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 230 CVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 280
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 35/180 (19%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S+ + P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +
Sbjct: 95 SNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTV 152
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDV--GTKTKLR-------------------- 125
SG D I+ V + +L + Q V TKL+
Sbjct: 153 SGVPDAIILCVRQICAVILEGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDP 212
Query: 126 --------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+VPN G +IG+ G+ I S A IKI + G +R VT+TG+
Sbjct: 213 STQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI---GNQAEGAGERHVTITGS 269
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N +N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN--------------GSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 211 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 267
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 268 GSPVSIALAQYLITACLET 286
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 156/347 (44%), Gaps = 74/347 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 235 TA---AHY---------------GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGG 276
A +H+ P + G + +T S + + ++ IG ++GR G
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 304
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK ++ G+++R+VTI+G SI A+ +I
Sbjct: 305 AKINEIRQMSGAQIKTANP---VEGSTDRQVTITGSAASISLAQYLI 348
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+ + E G+TDR + I+
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVE---GSTDRQVTIT 335
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 336 GSAASISLAQYLINVRLSSE 355
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IK + + G DR VT+T
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTA---NPVEGSTDRQVTIT 335
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 336 GSAASISLAQYLINVRLSSET 356
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 151/328 (46%), Gaps = 57/328 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTIND--FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
IR L+ G++IGK + F QSGARI +S + +RI+ I+G D I
Sbjct: 16 IRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEGN-----CPERIVTITGPTDAI 70
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
+A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + +
Sbjct: 71 FKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 130
Query: 153 AVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY---- 206
A ++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 AQVQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKP 184
Query: 207 TYAGVFFSGFHGMPYG-----AVPPP----------VPAVPHNTAAHYGPNMGGRKFQNN 251
V F+G G Y A+P P + P P G K +
Sbjct: 185 ASTPVIFAG--GQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLH 242
Query: 252 KDDRTNSLT----------------IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
+ +L + + ++ IG ++GR G I EI Q+SGA+IK+++
Sbjct: 243 SSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA 302
Query: 296 GDFFSGTSERKVTISGPQRSIRTAESMI 323
+ G+SER++TI+G +I A+ +I
Sbjct: 303 TE---GSSERQITITGTPANISLAQYLI 327
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 90 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 147
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 148 VTISGTPDAIIQCVKQICVVML 169
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 152/331 (45%), Gaps = 62/331 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +S ARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEGN-----CPERIVTITGPTDAIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ ++ I + + E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVKQICVVMLESP--PKGATIPYRPKPAT 186
Query: 209 AGVFFSGFHGMPYGAVPP------------PVP--------AVPH--------------- 233
A V FSG P P+P A+PH
Sbjct: 187 APVIFSGGQVRADTLTAPATANLSLLLQHQPLPAYTIQGQYAIPHPDLTKLHQLAMQQTP 246
Query: 234 -NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ P G + T+ LTI ++ IG ++GR G I EI Q+SGA+IK+
Sbjct: 247 FTSLGQTTPAFPG--VDASSQASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKI 302
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ G+S+R++TI+G +I A+ +I
Sbjct: 303 ANA---MEGSSDRQITITGTPANISLAQYLI 330
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 96 SKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNSTERAVTISGT 153
Query: 91 IDEILRAVDLVIDKLL 106
+ I++ V + +L
Sbjct: 154 PEAIIQCVKQICVVML 169
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 156/346 (45%), Gaps = 73/346 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG------------------------------------------FHGMPYGAVP- 225
V F+G H + P
Sbjct: 185 TPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPF 244
Query: 226 PPV----PAVPHNT----AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGR 277
PP+ PA P ++ N+ G+ + ++ + + ++ IG ++GR G
Sbjct: 245 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDVSPPASTHELTIPNDLIGCIIGRQGT 304
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 305 KINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 347
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 56/329 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +S ARI +S +RII I+G + + R
Sbjct: 7 LRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGS-----CPERIITITGATECVFR 61
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ KL +L A V +K LRL++P S CGS+IGK G+ IK + + A
Sbjct: 62 AFTMITIKLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTGAQ 121
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G+ D ++ ++LI + E + T+PY
Sbjct: 122 VQVAGDLLPNS----TERGVTISGSQDAIIQCVKLICTVILESP--PKGATIPYRPSPAP 175
Query: 209 AGVFFSG---FHGMPYGAVPPPVPA-----------------VPHNTAAH---------Y 239
V +G F + + P A +PH+ A
Sbjct: 176 GAVLLAGNQVFETSEFASHPLFSVAQGGLDLQQAYTVQNQYGIPHSELAKLHQLSMQQGL 235
Query: 240 GPNMGGRKFQN-----NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD 294
GP Q +T S + + ++ IG ++GR G I EI Q+SGA+IK+
Sbjct: 236 GPIAQATATQVLPAGIESSSQTASQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKI-- 293
Query: 295 RGDFFSGTSERKVTISGPQRSIRTAESMI 323
G TS+R VTI+G SI A+ +I
Sbjct: 294 -GSQLDSTSDRHVTITGSPISINLAQYLI 321
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGKGGS I + + ++GA++Q+ + + P +T+R + ISG+
Sbjct: 85 SKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQV--AGDLLPNSTERGVTISGS 142
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V L+ +L
Sbjct: 143 QDAIIQCVKLICTVIL 158
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++PN GSIIG+ G I S A IKI S+LD + +DR VT+TG+
Sbjct: 261 ELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDST----SDRHVTITGSPISINL 316
Query: 184 ALELI--LLKLSEDTLYSQTMTVP 205
A LI L+ ++ T S +M+ P
Sbjct: 317 AQYLITSCLETAKSTAQSSSMSTP 340
>gi|344283688|ref|XP_003413603.1| PREDICTED: poly(rC)-binding protein 1-like [Loxodonta africana]
Length = 438
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 158/336 (47%), Gaps = 69/336 (20%)
Query: 48 AVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT 107
A +G+ G+++ + +SGARI +S + +RII ++G + I +A ++IDKL
Sbjct: 109 ASLGRKGTSVKRIREESGARINISEGN-----CPERIITLTGPTNAIFKAFAMIIDKLEE 163
Query: 108 ELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHS 163
++++ ++ LRL+VP + CGS+IGK G IK + + A ++++ L +S
Sbjct: 164 DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNS 223
Query: 164 YYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSGF 216
+R +T+ G ++ E ++ + L++L+ + + MT+PY + V +G
Sbjct: 224 ----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGG 279
Query: 217 H-------GMPYGAV----PP-------------PVPAVPHNTAA----HYGPNMGGRKF 248
G P+ PP P+ N A H+ GG F
Sbjct: 280 QDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMLHGGTGF 339
Query: 249 Q----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ T+ LTI + IG ++GR G NI EI Q+SGA+IK+
Sbjct: 340 AGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINEIRQMSGAQIKI 397
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
++ G+S R+VTI+G SI A+ +I +++
Sbjct: 398 ANP---VEGSSGRQVTITGSAASISLAQYLINARLS 430
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 172 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 229
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 230 IAGVPQSVTECVKQICLVMLETLSQ 254
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 342 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 398
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 399 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 432
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + N L G +IG+ G+ IN+ + SGA+I+++ E G++ R + I+G+ I
Sbjct: 362 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASI 418
Query: 95 LRAVDLVIDKLLTE 108
A L+ +L +E
Sbjct: 419 SLAQYLINARLSSE 432
>gi|389585810|dbj|GAB68540.1| RNA-binding protein Nova-1, partial [Plasmodium cynomolgi strain B]
Length = 278
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 19/266 (7%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T + +++ LV+N +AG+VIGK GS I ++++G ++LS ++ +FP T +R++++ G
Sbjct: 14 TSQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGK 73
Query: 91 IDEILRAVDLVIDK---LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
++I A+ +++DK + T+ + Q + K R++VP S+ +IIGK G IK
Sbjct: 74 QEQINNALLIILDKIRQITTQNFQDKQNINTAPKYTCRIVVPKSAVSAIIGKGGQQIKQL 133
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
D + A I+IS + GLN+R++++ G + + + D + V Y+
Sbjct: 134 QDSTGAKIQISSRED---GLNERIISIIGPFESISDTAIKVTNSIQNDPNLKDLLNVIYS 190
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG---------PNMGGRKFQNNKD--DRT 256
+G + V VP + YG NM ++++D +
Sbjct: 191 -KDTSMNGRSSLSQNFV-NQVPLNGYVVPQQYGVFQHEQYMDVNMMNSLMRHSRDLFNLP 248
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEI 282
++I + DE IG V+G+ G + I
Sbjct: 249 CEISIQIPDEFIGSVIGKNGARLTNI 274
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 48/193 (24%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++++V N GS+IGK G+ I S + + +K+S + + +R++ L G ++
Sbjct: 20 VKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGKQEQINN 79
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
AL +IL K+ + T + F + NTA Y
Sbjct: 80 ALLIILDKIRQITTQN-------------FQDKQNI--------------NTAPKY---- 108
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+ I V + ++G+GG+ I ++ +GA+I++S R D G +
Sbjct: 109 --------------TCRIVVPKSAVSAIIGKGGQQIKQLQDSTGAKIQISSRED---GLN 151
Query: 304 ERKVTISGPQRSI 316
ER ++I GP SI
Sbjct: 152 ERIISIIGPFESI 164
>gi|358334721|dbj|GAA27863.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 759
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 98/165 (59%), Gaps = 6/165 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AGAVIGK G I Q + ++++S+ EF+PGTT+R+ +I G+++ ++
Sbjct: 39 HLKVLIPSIAAGAVIGKYGEAIGKIQKDTNTKVKISKQDEFYPGTTERVCLIVGSMEGVM 98
Query: 96 RAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ ++D++L + A +V +++++VPNS+ G +IGK G+ I+ +
Sbjct: 99 SVHNYIMDRILEKPDPNPHATCEGRLNVERHKQVKILVPNSTAGMVIGKGGSYIQEIKEK 158
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ A ++IS+ + L +R + + G LD+ A++LIL ++ D
Sbjct: 159 TGAYVQISQKSRE-FNLLERCIIIAGDLDQTRAAVQLILAVIAAD 202
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 48/227 (21%)
Query: 103 DKLLTELHAE-DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
D LL E + DD L++++P+ + G++IGK G I D+ +KIS+ D
Sbjct: 21 DVLLPETTPKRANCDD---NVHLKVLIPSIAAGAVIGKYGEAIGKIQKDTNTKVKISKQD 77
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPY 221
Y G +R+ + G+++ M I+ ++ E
Sbjct: 78 EFYPGTTERVCLIVGSMEGVMSVHNYIMDRILEK-------------------------- 111
Query: 222 GAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
P P PH T GR +R + I V + G V+G+GG I E
Sbjct: 112 -----PDPN-PHATCE-------GRL----NVERHKQVKILVPNSTAGMVIGKGGSYIQE 154
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I + +GA +++S + F+ ER + I+G R A +I+ +A
Sbjct: 155 IKEKTGAYVQISQKSREFN-LLERCIIIAGDLDQTRAAVQLILAVIA 200
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + IG ++G GR+I+++ SG I+VS +G + GT R VTI+GPQ +++ A
Sbjct: 604 IAVPESIIGLLLGPQGRSIVDLQASSGTVIQVSQKGVYAPGTQNRLVTITGPQLNVQWAA 663
Query: 321 SMIMQKVAYASDR 333
++I Q+VA R
Sbjct: 664 NVIEQRVAVEQLR 676
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 251 NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
N DD + L + + G V+G+ G I +I + + ++K+S + +F+ GT+ER I
Sbjct: 33 NCDDNVH-LKVLIPSIAAGAVIGKYGEAIGKIQKDTNTKVKISKQDEFYPGTTERVCLIV 91
Query: 311 GPQRSIRTAESMIMQKVAYASD 332
G + + + IM ++ D
Sbjct: 92 GSMEGVMSVHNYIMDRILEKPD 113
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G ++G G +I D Q+ SG IQ+S+ + PGT +R++ I+G + A +++ ++
Sbjct: 612 GLLLGPQGRSIVDLQASSGTVIQVSQKGVYAPGTQNRLVTITGPQLNVQWAANVIEQRVA 671
Query: 107 TE 108
E
Sbjct: 672 VE 673
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 150/332 (45%), Gaps = 65/332 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDTIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ ++ I + + E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 186
Query: 209 AGVFFSG----------------------------FHGMPYGAVPPP---------VPAV 231
V FSG G Y A+P P +
Sbjct: 187 TPVIFSGGQVSAELLKTTLTPNLTLLMQQKCPAYTIQGQ-Y-AIPHPDLTKLHQLAMQQT 244
Query: 232 PHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIK 291
P P G T+ LTI ++ IG ++GR G I EI Q+SGA+IK
Sbjct: 245 PFTPLGQTTPAFPG--LDAAPPASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIK 300
Query: 292 VSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+++ G+SER++TI+G +I A+ +I
Sbjct: 301 IANA---MEGSSERQITITGTPANISLAQYLI 329
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 86 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNS 143
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT + I++ V + +L
Sbjct: 144 TERAVTISGTPEAIIQCVKQICVVML 169
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 269 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSERQITITGTPANISLA 325
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 326 QYLINARLTSEV 337
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 25 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDTIFKAFAMIAY 79
Query: 326 K 326
K
Sbjct: 80 K 80
>gi|344232044|gb|EGV63923.1| hypothetical protein CANTEDRAFT_104592 [Candida tenuis ATCC 10573]
Length = 408
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 144/331 (43%), Gaps = 63/331 (19%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R L+S+ +G +IG+ GS IN + ++ + +S+ T +RI+ +SGT+D +A
Sbjct: 100 RLLISSKESGCLIGQSGSVINSIRQETDTKAGISK---LLAHTQERILTVSGTLDNCSKA 156
Query: 98 VDLVIDKLL-TELHAEDQADDV---------------------------GTKTKLRLIVP 129
+ L+ + H D A G T LRL++P
Sbjct: 157 ISYFSQALIEAQQHEADAASTASAGPMPSSVEEYPHFPLRQLSIHKNIAGHSTVLRLLIP 216
Query: 130 NSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALEL 187
NS G+IIG GA I+ Q V +S + + G N+RLV L G++ E AL +
Sbjct: 217 NSQMGTIIGAKGARIQRI----QQVFGVSMIASKSFLPGSNERLVELQGSVPELYAALRV 272
Query: 188 ILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVP----PPVPAV-PHNTAAHYGPN 242
I L ED F G G Y VP P VP V P +A P
Sbjct: 273 ISRCLIED-----------------FGGVVGTSY-YVPRPRRPDVPVVAPLPVSAPAAPG 314
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
G ++ R + ++ + + +G ++G+ G I + +ISGA I +SD G+
Sbjct: 315 TGPASDSSSSPARLVTTSMAFSKDIVGALIGKSGSRIQGVRKISGAIIGISDE---LEGS 371
Query: 303 SERKVTISGPQRSIRTAESMIMQKVAYASDR 333
SER TISG ++ A++++ + R
Sbjct: 372 SERIFTISGSTYAVDKAKALLKHNLEREQQR 402
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 158/354 (44%), Gaps = 59/354 (16%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H + V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 SKIKEIREVTGASIQVASDMLPNS----TERAVTISGTSEAITQCIYHICCVMLESP--P 177
Query: 200 QTMTVPY----------TYAG---VFFSGFHGMP-------YGAVPPPVPAVPHNTAAHY 239
+ T+PY AG G + +P G+ P A
Sbjct: 178 KGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHSDMGKLGSNPLAGLAALGLGGLAT 237
Query: 240 GPNMGG-------------------RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIM 280
N GG + Q +++T+ +T V +E IG ++G+GG I
Sbjct: 238 PANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMT--VPNELIGCIIGKGGTKIA 295
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
EI QISGA I++S+ + G ++R +TI+G ++ A+ +I V L
Sbjct: 296 EIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSVELQKANL 349
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 275 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 334
Query: 185 LELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 335 QYLISMSVELQKANLEAQNTQTP 357
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 157/354 (44%), Gaps = 59/354 (16%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 SKIKEIREVTGASIQVASEMLPNS----TERAVTISGTSEAITQCIYHICCVMLESP--P 177
Query: 200 QTMTVPY----------TYAG---VFFSGFHGMP-------YGAVPPPVPAVPHNTAAHY 239
+ T+PY AG G + +P G+ P A
Sbjct: 178 KGATIPYRPKPQVGGPLILAGGQAYTIQGNYAVPAHSDMGKLGSNPLAGLAALGLGGLAT 237
Query: 240 GPNMGG-------------------RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIM 280
N GG + Q +++T+ +T V +E IG ++G+GG I
Sbjct: 238 PANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMT--VPNELIGCIIGKGGTKIA 295
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
EI QISGA I++S+ + G ++R +TI+G ++ A+ +I V L
Sbjct: 296 EIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSVELQKANL 349
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 275 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 334
Query: 185 LELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 335 QYLISMSVELQKANLEAQNTQTP 357
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
NM + N+ T ++ + + + +G ++G+ G + + SGA+I +SD
Sbjct: 3 NMDAKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-----GS 57
Query: 302 TSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
ER VT++GP SI A ++I +K + D
Sbjct: 58 CPERIVTVTGPTNSIFKAFTLICKKFEEWCSQFHD 92
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 158/354 (44%), Gaps = 59/354 (16%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H + V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 SKIKEIREVTGASIQVASDMLPNS----TERAVTISGTSEAITQCIYHICCVMLESP--P 177
Query: 200 QTMTVPY----------TYAG---VFFSGFHGMP-------YGAVPPPVPAVPHNTAAHY 239
+ T+PY AG G + +P G+ P A
Sbjct: 178 KGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHSDMGKLGSNPLAGLAALGLGGLAT 237
Query: 240 GPNMGG-------------------RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIM 280
N GG + Q +++T+ +T V +E IG ++G+GG I
Sbjct: 238 PANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMT--VPNELIGCIIGKGGTKIA 295
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
EI QISGA I++S+ + G ++R +TI+G ++ A+ +I V L
Sbjct: 296 EIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQYLISMSVELQKANL 349
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 275 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLA 334
Query: 185 LELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 335 QYLISMSVELQKANLEAQNTQTP 357
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 155/347 (44%), Gaps = 74/347 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKHICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 235 TA---AHY---------------GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGG 276
A +H+ P + G + +T S + + ++ IG ++G G
Sbjct: 245 LAVQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGCQG 304
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 AKINEICQMSGALIKIANT---VEGSTDRQVTITGSAASISLAQYLI 348
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG GA I S A+IKI+ ++ G DR VT+T
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIA---NTVEGSTDRQVTIT 335
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 336 GSAASISLAQYLINVRLSSET 356
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG G+ IN+ SGA I+++ + E G+TDR + I+
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIANTVE---GSTDRQVTIT 335
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 336 GSAASISLAQYLINVRLSSE 355
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 159/354 (44%), Gaps = 59/354 (16%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H + V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 SKIKEIREVTGASIQVASDMLPNS----TERAVTISGTSEAITQCIYHICCVMLESP--P 177
Query: 200 QTMTVPY----------TYAG---VFFSGFHGMP-------YGAVPPPVPAVPHNTAAHY 239
+ T+PY AG G + +P G+ P A
Sbjct: 178 KGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHSDMGKLGSNPLAGLAALGLGGLAT 237
Query: 240 GPNMGG--------------RKFQNNK-----DDRTNSLTIGVADEHIGFVVGRGGRNIM 280
N GG R N+ +++T+ +T V +E IG ++G+GG I
Sbjct: 238 PANTGGLNPAALAALAGSQLRTSNTNRQQPAGNNQTHEMT--VPNELIGCIIGKGGTKIA 295
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
EI QISGA I++S+ + G ++R +TI+G ++ A+ +I V L
Sbjct: 296 EIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSVELQKANL 349
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ G + VPN G IIGK G I S A+I+IS + G DR +
Sbjct: 263 NRQQPAGNNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTI 322
Query: 173 TLTGTLDEQMRALELILL--KLSEDTLYSQTMTVP 205
T+TG D A LI + +L + L +Q P
Sbjct: 323 TITGNPDAVALAQYLISMSVELQKANLEAQNTQTP 357
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 149/309 (48%), Gaps = 24/309 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGK G IN+ + +S AR+ +S E PG +RI+ +SG +D + +
Sbjct: 549 MRTLIVTSDASIIIGKSGKHINEIRDKSNARLNIS---EIIPGNPERILTVSGPLDAVSK 605
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ ++ E D A G+K+ +R IVPNS GS+IGK G+ IK + S A
Sbjct: 606 AFGLIVRRINDEPF--DLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGA-- 661
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALEL---ILL----KLSEDTLYSQTMTVPYTY 208
+++ + G +R+++++G D A+ ILL + + + Y T P T
Sbjct: 662 RLTAGEAMLPGSTERVLSISGVADAVHIAVYYVGSILLEHPDRNANNLPYRPTAGGPSTR 721
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHI 268
AG + PY A P P G Q +T I + ++ +
Sbjct: 722 AGAAGAN----PYAAPQQPFGYGAPAAGFGGAPAGAGGAPQLPPGSQTQQ--IFIPNDLV 775
Query: 269 GFVVGRGGRNIMEISQISGARIKVSD---RGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
G ++G+GG I EI +S + IK+ + +ER VTI+GP +I+ A S++ Q
Sbjct: 776 GCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNIQMAVSLLYQ 835
Query: 326 KVAYASDRL 334
++ RL
Sbjct: 836 RLEQEKMRL 844
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 94/227 (41%), Gaps = 60/227 (26%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+S P K IRF+V N G+VIGK GS I + Q SGAR L+ PG+T+R++
Sbjct: 621 LASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGAR--LTAGEAMLPGSTERVL 678
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDV--------------------------- 118
ISG D + AV V LL H + A+++
Sbjct: 679 SISGVADAVHIAVYYVGSILLE--HPDRNANNLPYRPTAGGPSTRAGAAGANPYAAPQQP 736
Query: 119 -------------------------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
G++T+ ++ +PN G IIGK G+ I S +
Sbjct: 737 FGYGAPAAGFGGAPAGAGGAPQLPPGSQTQ-QIFIPNDLVGCIIGKGGSKINEIRSMSAS 795
Query: 154 VIKI---SRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
IKI + N+RLVT+TG A+ L+ +L ++ +
Sbjct: 796 HIKIMEPGAGIAAGGSGNERLVTITGPPPNIQMAVSLLYQRLEQEKM 842
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D ++ T+ +R ++ S IIGK+G I D S A + IS + G +R++
Sbjct: 538 DSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEI---IPGNPERIL 594
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T++G LD +A LI+ +++++ P+ A V S
Sbjct: 595 TVSGPLDAVSKAFGLIVRRINDE---------PFDLASVPGS------------------ 627
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
++ ++ V + +G V+G+ G I EI + SGAR+
Sbjct: 628 ----------------------KSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTA 665
Query: 293 SDRGDFFSGTSERKVTISG 311
+ G++ER ++ISG
Sbjct: 666 GE--AMLPGSTERVLSISG 682
>gi|157108182|ref|XP_001650113.1| nova [Aedes aegypti]
gi|108868575|gb|EAT32800.1| AAEL014965-PA [Aedes aegypti]
Length = 479
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 95/169 (56%), Gaps = 15/169 (8%)
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL---------LTELHAEDQADDVGT 120
+S++H+F+PGT++R+ +ISGT+D IL +D +IDK+ LT+ A+ AD
Sbjct: 1 MSKAHDFYPGTSERVCLISGTVDGILTVLDFIIDKIREKPDMTKALTDADAKQAADR--- 57
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+++++VPNS+ G IIGKAGA IK ++S + ++IS+ L +R +T+ G +
Sbjct: 58 DKQVKVLVPNSTAGMIIGKAGAYIKQIKEESGSYVQISQKPKELT-LQERCITIIGEKEN 116
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH--GMPYGAVPPP 227
A ++IL K+ ED + V Y + F+ G P+ A P
Sbjct: 117 NKIACKMILQKIVEDPSSGSCLNVSYADINGPVANFNPTGSPFAASQNP 165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G GR+++EI +SGA I++S +G F GT R VTI+G +I A +I Q++
Sbjct: 387 VGAILGPAGRSLVEIQHLSGANIQISKKGIFAPGTRNRIVTITGAPNAINVAHYLIEQRI 446
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 25 SLSSDPT--EKPTYIRFLVSNP--LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
SLS PT E T V P + GA++G G ++ + Q SGA IQ+S+ F PGT
Sbjct: 362 SLSKSPTPAEMTTSKEKNVEIPEVIVGAILGPAGRSLVEIQHLSGANIQISKKGIFAPGT 421
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTE 108
+RI+ I+G + I A L+ ++ E
Sbjct: 422 RNRIVTITGAPNAINVAHYLIEQRIQEE 449
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
DR + + V + G ++G+ G I +I + SG+ +++S + + ER +TI G +
Sbjct: 56 DRDKQVKVLVPNSTAGMIIGKAGAYIKQIKEESGSYVQISQKPKELT-LQERCITIIGEK 114
Query: 314 RSIRTAESMIMQKV 327
+ + A MI+QK+
Sbjct: 115 ENNKIACKMILQKI 128
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ LV N AG +IGK G+ I + +SG+ +Q+S+ + +R I I G +
Sbjct: 61 VKVLVPNSTAGMIIGKAGAYIKQIKEESGSYVQISQKPKELT-LQERCITIIGEKENNKI 119
Query: 97 AVDLVIDKLL 106
A +++ K++
Sbjct: 120 ACKMILQKIV 129
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 157/346 (45%), Gaps = 68/346 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI++ + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A ++I KL ++++ ++ LRL+VP + CGS+IGK G IK + A +
Sbjct: 71 AFAMIIYKLEEDINSSMTKSTAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQV 130
Query: 156 KIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE----------DTLYSQTM- 202
+++ L +S +R +T+ G + ++ I L + E T+ Q M
Sbjct: 131 QVAGDMLPNS----TERAITIAGVPQSVTKCVKQICLVMLETLSHSPQGKVKTILYQPMP 186
Query: 203 -TVPYTYAGV--FFSGFHGMPYGA---VPPPVPAV---------PHNTA---------AH 238
P T AG S G P+ PP+ A P N A +H
Sbjct: 187 SRSPVTCAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLNLAKLNQVARQQSH 246
Query: 239 YGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEI 282
+ GG F + T+ LTI + IG ++GR G NI EI
Sbjct: 247 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQITHELTI--PNNLIGCIIGRQGTNINEI 304
Query: 283 SQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 RQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLIKARLS 347
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 263 SPEVKGYWA-------SLDASTQITH-ELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKI 314
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
+ E G++ R + I+G+ I A L+ +L +E + VG+
Sbjct: 315 ANPVE---GSSGRQVTITGSAASISLAQYLIKARLSSEKGMGCSWNSVGS 361
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 151/319 (47%), Gaps = 44/319 (13%)
Query: 30 PTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
P +P + +R LV++ + GA+IG+ G TI Q+ AR+ + R G+ ++ I I
Sbjct: 5 PQRQPDFPLRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENV--GSLEKAITIY 62
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAGATIKSF 147
G + A V++ + + +AD+ + L+++ N+ G IIGK G+TIK
Sbjct: 63 GNPENCTNACRRVLEVM------QQEADNTNKGEISLKILAHNNLIGRIIGKGGSTIKRV 116
Query: 148 MDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQ 200
M +++ I +S L D S + + +R++T+ GT+D RA +I KL + + Q
Sbjct: 117 MLETETKITVSSLNDVSSFNM-ERVITIKGTIDNMSRAEGMISAKLRQSYESDLQAMAPQ 175
Query: 201 TMTVP-------YTYAGVFFS-GFHGMPYGAVPPPVP--AVPHNTAAHYGPNMGGRKFQN 250
+M P + G+ FS G P A P P A P+ A G +G F
Sbjct: 176 SMMFPGLHPMAMMSTVGMGFSPSVRGTPPAAAPGMYPPGAAPYAQAGPAG--VGETSF-- 231
Query: 251 NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD--RGDFFSGTSERKVT 308
+ + + +G ++G G +I I + SGA +K++ G +ERKVT
Sbjct: 232 ----------LYIPNSAVGAIIGTRGSHIRNIIRFSGASVKITSLPEGTTAEPQAERKVT 281
Query: 309 ISGPQRSIRTAESMIMQKV 327
I G + A+ +I +K+
Sbjct: 282 IVGTPEAQWKAQYLIFEKM 300
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 119/312 (38%), Gaps = 103/312 (33%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGKGGSTI ++ +I +S ++ +R+I I GTID + R
Sbjct: 93 LKILAHNNLIGRIIGKGGSTIKRVMLETETKITVSSLNDVSSFNMERVITIKGTIDNMSR 152
Query: 97 AVDLVIDKLLTELHAEDQAD-------------------DVGTKTKLRLIVPNSSCG--- 134
A ++ KL ++ QA +G +R P ++ G
Sbjct: 153 AEGMISAKLRQSYESDLQAMAPQSMMFPGLHPMAMMSTVGMGFSPSVRGTPPAAAPGMYP 212
Query: 135 ----------------------------SIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
+IIG G+ I++ + S A +KI+ L
Sbjct: 213 PGAAPYAQAGPAGVGETSFLYIPNSAVGAIIGTRGSHIRNIIRFSGASVKITSLPEGTTA 272
Query: 167 --LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAV 224
+R VT+ GT + Q +A LI K+ E+ GF MP G
Sbjct: 273 EPQAERKVTIVGTPEAQWKAQYLIFEKMREE-------------------GF--MPAG-- 309
Query: 225 PPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
+D ++ + VA +G ++G+GG+N+ E+ +
Sbjct: 310 ----------------------------EDVRLTVELLVASSQVGRIIGKGGQNVREMQR 341
Query: 285 ISGARIKVSDRG 296
+ + IK+ ++G
Sbjct: 342 TTSSVIKLPEQG 353
>gi|397569372|gb|EJK46704.1| hypothetical protein THAOC_34610 [Thalassiosira oceanica]
Length = 507
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 105/192 (54%), Gaps = 37/192 (19%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P P HG S P + I+ LVSN +G +IG+ G TI++ Q++S ARI+
Sbjct: 72 PEPQDHGTSSNQPYVA-----------IKVLVSNSASGLIIGRSGQTISELQAKSHARIK 120
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHA---------EDQADDVGT 120
LS+ +++PGT+DRI ++ G + + A++LV+ KL EL + E AD+ +
Sbjct: 121 LSQGGDYYPGTSDRICLVQGALSCVKVAIELVLAKLY-ELQSLQQVSTQVTEQSADNEPS 179
Query: 121 KTK--------LRLIVPNSSCGSIIGKAGATIKSFMDDSQ-AVIKISRLDH-------SY 164
+ +R+++P++ CG +IG+ G+ IK + S+ + I++S +H +
Sbjct: 180 QQVIQPPPVFIIRVLMPSACCGMVIGRGGSNIKELKEKSRVSFIQLSPKEHEVLVGHGAT 239
Query: 165 YGLNDRLVTLTG 176
N+R++T+TG
Sbjct: 240 LSTNERIMTITG 251
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS-IRTA 319
+G+ D IG ++G+GG+ + +I + +I++S RGDF GT R VTI+G R + A
Sbjct: 435 LGIPDYRIGSILGKGGKILTDIQASTRTKIRISQRGDFIPGTKNRSVTITGQTREDVEAA 494
Query: 320 ESMIMQKV 327
E I + +
Sbjct: 495 EKRIHECI 502
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
++ + V++ G ++GR G+ I E+ S ARIK+S GD++ GTS+R + G ++
Sbjct: 87 AIKVLVSNSASGLIIGRSGQTISELQAKSHARIKLSQGGDYYPGTSDRICLVQGALSCVK 146
Query: 318 TAESMIMQKV 327
A +++ K+
Sbjct: 147 VAIELVLAKL 156
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G+++GKGG + D Q+ + +I++S+ +F PGT +R + I+G E + A + I + +
Sbjct: 443 GSILGKGGKILTDIQASTRTKIRISQRGDFIPGTKNRSVTITGQTREDVEAAEKRIHECI 502
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 153/317 (48%), Gaps = 42/317 (13%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ P ++R L+ A +IGKGGS +N+ + +SGAR+ +S E PG +RI+
Sbjct: 56 SAVPPSANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVS---ESIPGNPERILN 112
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAG 141
+SG +D + +A L++ ++ D+ DV G++ ++ ++PNS GS+IGK G
Sbjct: 113 VSGPLDAVSKAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGG 166
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA---LELILLKLSEDTLY 198
+ IK D S A K++ + G +R++++ G D A + IL++ E
Sbjct: 167 SKIKEIQDASGA--KLNASEGMLPGSTERVLSVAGVADAIHIATYYIGTILIEAQERMPS 224
Query: 199 SQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNS 258
+ T + + G Y VP H+ A YGP +N + +
Sbjct: 225 TSNSTYRPSSQPRRPTQGGGSSY------VPGYSHH--APYGP-------PHNPPQQLQT 269
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS--------ERKVTIS 310
I + ++ +G ++G+GG I EI +S ++IK+ + G G + ER V I+
Sbjct: 270 QQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVIT 329
Query: 311 GPQRSIRTAESMIMQKV 327
G +I+ A ++ ++
Sbjct: 330 GQPANIQMAVQLLYHRL 346
>gi|402086578|gb|EJT81476.1| Poly(rC)-binding protein 3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 486
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 161/370 (43%), Gaps = 81/370 (21%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HIRAVISSPEAATVIGKGGENVSKIRQLSGAKCTVS---DYQKGAVERILTVSGIVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E ++ A +KT LRL++P+ GSIIGK GA IK + S A
Sbjct: 184 KAFGLIIRTLNNEPLSD--ASSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGAR 241
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI---LLKLSED-------TLYS----- 199
+ S D ++R + + G D A + LL+ D + Y+
Sbjct: 242 LNAS--DSCLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAYATRAGG 299
Query: 200 -------QTMTVPY--TYAGVFFSGFHG-----------MPYGAVPP------------P 227
VPY AG F +P GA P P
Sbjct: 300 PVGAVPGGMQVVPYLPQPAGGNFGNRENYGRRPDPRAGPVPQGAAVPYAQHYNPHAAHQP 359
Query: 228 VPAVPHNTAA---------------HYGPNMGGRKFQNNKDDR------TNSLT--IGVA 264
PAVP + A H GP + G Q + SLT I +
Sbjct: 360 TPAVPVHYGAQGGAYGAHVQPPHVGHAGPQVHGAPHQQPMHSQMPGPGGAQSLTQQIYIP 419
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
++ +G ++G+GG I EI QISG+ IK+++ D ++ER VTI+G + R A M+
Sbjct: 420 NDMVGAIIGKGGTKINEIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLY 476
Query: 325 QKVAYASDRL 334
++ R+
Sbjct: 477 SRLESEKHRI 486
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 35 TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S P +++R +++ G D
Sbjct: 208 TYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDS--CLPLSSERSLVVMGVADA 265
Query: 94 ILRAVDLVIDKLLTELH 110
+ A V LL +L+
Sbjct: 266 VHIATYYVGSTLLEQLN 282
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIR-FLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
P VHG P+ S P + + + N + GA+IGKGG+ IN+ + SG+ I++
Sbjct: 388 PQVHGAPHQQPMHSQMPGPGGAQSLTQQIYIPNDMVGAIIGKGGTKINEIRQISGSVIKI 447
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 448 NEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 484
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 163/336 (48%), Gaps = 45/336 (13%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPT---YIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
+PD K ++ ++ ++ P P+ ++R L+ A +IGKGGS +N+ + +SGAR
Sbjct: 37 NPDSGDKAGSSYGEASTTAPAVPPSANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGAR 96
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKT- 122
+ +S E PG +RI+ +SG +D + +A L++ ++ D+ DV G++
Sbjct: 97 VMVS---ESIPGNPERILNVSGPLDAVSKAFGLIVRRI------NDEPFDVPSVPGSRAV 147
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++ ++PNS GS+IGK G+ IK D S A K++ + G +R++++ G D
Sbjct: 148 TIKFMIPNSRMGSVIGKGGSKIKEIQDASGA--KLNASEGMLPGSTERVLSVAGVADAIH 205
Query: 183 RA---LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
A + IL++ E + T + + G Y VP H+ A Y
Sbjct: 206 IATYYIGTILIEAQERMPSTSNSTYRPSSQPRRPTQGGGSSY------VPGYSHH--APY 257
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
GP +N + + I + ++ +G ++G+GG I EI +S ++IK+ + G
Sbjct: 258 GP-------PHNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATG 310
Query: 300 SGTS--------ERKVTISGPQRSIRTAESMIMQKV 327
G + ER V I+G +I+ A ++ ++
Sbjct: 311 LGPNGAPGGSEGERLVVITGQPANIQMAVQLLYHRL 346
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 159/360 (44%), Gaps = 65/360 (18%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 12 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 65
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGTKTK-------LRLIVPNSSCGS 135
++G + I +A L+ K ++ H + G LRLIVP S CGS
Sbjct: 66 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPITLRLIVPASQCGS 125
Query: 136 IIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+IGK G+ IK + + A I+++ L +S +R VT++GT + + + I +
Sbjct: 126 LIGKGGSKIKEIREVTGASIQVASEMLPNS----TERAVTISGTSEAITQCIYHICCVML 181
Query: 194 EDTLYSQTMTVPY-----------TYAGVFFS--GFHGMP-------YGAVPPPVPAVPH 233
E + T+PY G F+ G + +P G+ P A
Sbjct: 182 ESP--PKGATIPYRPKPQVGGPVILAGGQAFTIQGNYAVPAHSDMGKLGSSPLAGLAALG 239
Query: 234 NTAAHYGPNMGG-------------------RKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
N GG + Q +++T+ +T V +E IG ++G+
Sbjct: 240 LGGLAAPANTGGLNPAALAALAGSQLRTNNANRQQPAANNQTHEMT--VPNELIGCIIGK 297
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
GG I EI QISGA I++S+ + G ++R +TI+G S+ A+ +I V L
Sbjct: 298 GGTKIAEIRQISGAMIRISNCEEREGGPTDRTITITGNPDSVALAQYLINMSVELQKANL 357
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 250 NNK----DDRTNSLTIGV--ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NNK DD + +LTI + + +G ++G+ G + + SGA+I +SD
Sbjct: 7 NNKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-----GSCP 61
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
ER VT++GP SI A ++I +K + D
Sbjct: 62 ERIVTVTGPTNSIFKAFTLICKKFEEWCSQFHD 94
>gi|395751404|ref|XP_003780598.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Pongo
abelii]
Length = 681
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 16/200 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+ + GTT+R+ ++ GT E L
Sbjct: 134 FLKELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQGTA-EAL 192
Query: 96 RAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ +V + +LIVPNS+ G IIGK GAT
Sbjct: 193 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 252
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 253 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 311
Query: 204 VPYT-YAG-VFFSGFHGMPY 221
+ Y AG V S G PY
Sbjct: 312 ISYANVAGPVANSNPTGSPY 331
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+ ++P+ + GSIIGK G TI ++ A IK + G +R+ + GT +
Sbjct: 135 LKELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQGTAEALNA 194
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 195 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 225
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 226 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 276
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 277 ERVVTVSGEPEQVHKAVSAIVQKV 300
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 146/342 (42%), Gaps = 68/342 (19%)
Query: 9 VPSPDVHGKRSTAPVKSLSSDPT-EKPTYIRF--LVSNPLAGAVIGKGGSTINDFQSQSG 65
+P P+ AP PT + PTY+ F L S A++GKGG TIN + S
Sbjct: 58 IPQPE-------APEPVTHHRPTNDDPTYVHFRMLCSINETAAIVGKGGETINRIKEMSS 110
Query: 66 ARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KL 124
AR+ +S E G +R+I + G + + +A L+ ++ E +QA V +K L
Sbjct: 111 ARVNVS---ENLKGIPERVITVRGPAEYVAKAFGLITRAIMDEPF--NQASTVESKQINL 165
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+L+ P++ G IIGK GA + D+S A +K S D DR++ +TG D A
Sbjct: 166 KLLFPHTIIGYIIGKRGARFREIEDNSAAALKAS--DQILPASTDRILHITGVAD----A 219
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHG-------------MPYG-AVPPPVPA 230
+ + +++ + + + VF++ + M YG PP V
Sbjct: 220 IHIATYYVAQTVIEHKQ----HLAKAVFYNPANCNQPSTPVGGNASRMAYGNGYPPQVMQ 275
Query: 231 VPHNTAAHYGPNMG-----------------------GRKFQNNKDDRTNSLTIGVADEH 267
VP P MG Q + I V H
Sbjct: 276 VP--APIMQSPYMGQPVQQPYGQYIPGAAAGAVAAPVPAPMQAQSGQEKINQDIYVPQMH 333
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
IG V+G+GG+N+ +I I+G +KV+D G +ERK+T+
Sbjct: 334 IGLVIGKGGKNLKDIRTITGCYVKVNDE---VPGATERKLTL 372
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+VG+GG I I ++S AR+ VS+ G ER +T+ GP + A +I + +
Sbjct: 94 IVGKGGETINRIKEMSSARVNVSEN---LKGIPERVITVRGPAEYVAKAFGLITRAI 147
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 155/343 (45%), Gaps = 61/343 (17%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V SL + +E+ +R L + G +IGKGG TI + SGARI++ S
Sbjct: 301 VSSLGASQSEE-LIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLI 359
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
I T D AV+ V+ LL E ++ ED A +RL+VP+ G IIG++G
Sbjct: 360 TITATESTSDLKSVAVEAVL--LLQEKINDEDDA-----PVSIRLLVPSKVIGCIIGRSG 412
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSEDTL--- 197
A I ++A I+ISR + Y ND LV + G +D AL I+L+L ED L
Sbjct: 413 AIINEIRKRTKADIQISRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNK 472
Query: 198 ---YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP-------------HNTAAHYG- 240
+++ + YA M ++P PA+ H++ +HYG
Sbjct: 473 DIDHNRHIGSESLYASSSVLSAPPM-LSSIPATAPALAYDQRTGSGTGLGMHSSRSHYGY 531
Query: 241 -------------PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISG 287
+ ++ ++ ++L + V +G V+G+GG N+ I +ISG
Sbjct: 532 DSYSMEDNGYGSMSSYATNLYEGHRLPPLSTLEMVVPANAVGKVMGKGGANLANIRKISG 591
Query: 288 ARIKVSD----RGD---FFSGTSERKVTISGPQRSIRTAESMI 323
A +++S+ RGD SGTSE K R AE++I
Sbjct: 592 ATVEISESKSYRGDRVALISGTSEEK----------RAAENLI 624
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 118/312 (37%), Gaps = 62/312 (19%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI---------- 87
R L N + G+VIGK G IN + +S A++++ + FPG R+I I
Sbjct: 45 RILCPNEVIGSVIGKNGKVINSIRQESRAKVKVV---DPFPGAKHRVITIFCHVKNKEEI 101
Query: 88 ------------SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
D +++ + + + T A D K + +++VP+S
Sbjct: 102 EIEDEFDNEKPLCAAQDALIKVHSAISNSIET---AGDSEKKRKNKDECQILVPSSQSAI 158
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL---EL 187
+IGKAGATIK ++ IK+ D HS D V L G + RAL
Sbjct: 159 LIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFV-LVGESEAVKRALFAVST 217
Query: 188 ILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGM--PYGAVPPPVPAVPHNTAAHYGPNMGG 245
I+ K S TVP T + + P G P P V +
Sbjct: 218 IMYKFSPKEDIPLDTTVPETPHSIIIPSELPIYPPGGLYPASDPIVQPRSFPQLIGATTM 277
Query: 246 RKFQNNKDDRTNSL-----------TIGVAD------------EHIGFVVGRGGRNIMEI 282
+ D N+ ++G + + IG ++G+GG I +
Sbjct: 278 QDLHGGYADTGNTWPLYSSPLPVVSSLGASQSEELIVRMLCPSDKIGQLIGKGGGTIKRM 337
Query: 283 SQISGARIKVSD 294
Q SGARI+V D
Sbjct: 338 RQASGARIEVDD 349
>gi|242020720|ref|XP_002430800.1| predicted protein [Pediculus humanus corporis]
gi|212515997|gb|EEB18062.1| predicted protein [Pediculus humanus corporis]
Length = 515
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 145/313 (46%), Gaps = 40/313 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ G+TI Q+ AR+ + R G+ ++ I I G D
Sbjct: 116 LRILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHRKDNV--GSLEKAITIYGNPDNCTN 173
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A K+L + AE + G + L+++ N+ G IIGK G TIK M D+ + I
Sbjct: 174 ACK----KILEVMQAEASNTNKG-EISLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKIT 228
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVPYTYA 209
+S + D + + L +R++T+ GT+D RA I KL + + QTM P +
Sbjct: 229 VSSINDINSFNL-ERIITVKGTIDNMSRAESEISAKLRQSYENDLQAMAPQTMMFPGLHP 287
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAA------------HYGPNMGGRKFQNNKDDRTN 257
S + M Y + P V + A GP+ GG D
Sbjct: 288 MAMMS-TNNMGYSSRPGAFGGVYGSGAPIPYSPIYPPAGPQQGPSQGG--------DSQE 338
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT---SERKVTISGPQR 314
+ + + + +G ++G G +I I + SGA +K++ + GT +ERKVTI G
Sbjct: 339 TTFLFIPNSAVGAIIGTKGTHIRNIIRFSGASVKIASL-EQEKGTEPPAERKVTIVGTPE 397
Query: 315 SIRTAESMIMQKV 327
S A+ +I +K+
Sbjct: 398 SQWKAQYLIFEKM 410
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 59/201 (29%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN---DRLVTLTGTLDEQM 182
L +PNS+ G+IIG G I++ + S A +KI+ L+ G +R VT+ GT + Q
Sbjct: 342 LFIPNSAVGAIIGTKGTHIRNIIRFSGASVKIASLEQEK-GTEPPAERKVTIVGTPESQW 400
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
+A LI K+ E+ GF G
Sbjct: 401 KAQYLIFEKMREE-------------------GFIG------------------------ 417
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
+ DD LT+ + +G ++G+GG+N+ E+ +G+ IK+ ++G
Sbjct: 418 -------SGNDDV--KLTVEIL---VGRIIGKGGQNVRELQHATGSIIKLPEQGAAPPAQ 465
Query: 303 SERKVTISGPQRSIRTAESMI 323
E V I GP S+++A+ I
Sbjct: 466 EETTVHIIGPFFSVQSAQRRI 486
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
+++ +S+ + ++ L N L G +IGKGG+TI + ++I +S ++ +
Sbjct: 182 MQAEASNTNKGEISLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDINSFNLE 241
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
RII + GTID + RA + KL + QA
Sbjct: 242 RIITVKGTIDNMSRAESEISAKLRQSYENDLQA 274
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT---TDRIIMISGTIDEIL 95
+ N GA+IG G+ I + SGA ++++ S E GT +R + I GT +
Sbjct: 342 LFIPNSAVGAIIGTKGTHIRNIIRFSGASVKIA-SLEQEKGTEPPAERKVTIVGTPESQW 400
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+ +K+ E DDV K + ++V G IIGK G ++ + ++I
Sbjct: 401 KAQYLIFEKMREEGFIGSGNDDV--KLTVEILV-----GRIIGKGGQNVRELQHATGSII 453
Query: 156 KI 157
K+
Sbjct: 454 KL 455
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
SL I + IG ++G+GG I I Q + ++I VS D S ER +T+ G ++
Sbjct: 195 SLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDINSFNLERIITVKGTIDNMS 254
Query: 318 TAESMIMQKV--AYASD 332
AES I K+ +Y +D
Sbjct: 255 RAESEISAKLRQSYEND 271
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 157/359 (43%), Gaps = 64/359 (17%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 7 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 60
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGTKT------KLRLIVPNSSCGSI 136
++G + I +A L+ K ++ H G LRLIVP S CGS+
Sbjct: 61 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSL 120
Query: 137 IGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IGK G+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 121 IGKGGSKIKEIREVTGASIQVASEMLPNS----TERAVTISGTSEAITQCIYHICCVMLE 176
Query: 195 DTLYSQTMTVPY----------TYAG---VFFSGFHGMP-------YGAVPPPVPAVPHN 234
+ T+PY AG G + +P G+ P A
Sbjct: 177 SP--PKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHSDMGKLGSNPLASLAALGL 234
Query: 235 TAAHYGPNMGG-------------------RKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
N GG + Q +++T+ +T V +E IG ++G+G
Sbjct: 235 GGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMT--VPNELIGCIIGKG 292
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
G I EI QISGA I++S+ + G ++R +TI+G ++ A+ +I V L
Sbjct: 293 GTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLINMSVELQKANL 351
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 278 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 337
Query: 186 ELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 338 YLINMSVELQKANLEAQNTQTP 359
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 142/319 (44%), Gaps = 41/319 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L + G VIGKGGSTI + SGA I++ S F D ++I T +
Sbjct: 309 IRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANF----DECLIIITTTESPSD 364
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+ ++ +L + DD T +RL+VP+ G IIGK+G+ I ++A ++
Sbjct: 365 LKSMAVEAVLLMQGKINDEDD--TTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVR 422
Query: 157 ISRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ-TMTVPYTYAGVFFS 214
IS+ D ND LV + G++D AL I+L+L +D L + T P A +
Sbjct: 423 ISKGDKPKCADANDELVEVGGSVDCVRDALIQIILRLRDDVLRERDTGHNPSIGAESLYP 482
Query: 215 GFHGMPYGAVPPPVPAV--------------------PHNTAAHYGP-NMGGRKFQNNKD 253
G G+ ++ VP V P + YG MG + +
Sbjct: 483 GSAGLSLPSMMHSVPPVAAPMVYDHRAESGAGLGMLSPSSPYGGYGSLPMGDNGYGSMSS 542
Query: 254 DRT---------NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE 304
T ++L + + +G V+G+GG NI I +ISGA I++SD S +
Sbjct: 543 YATKLYGGLPPPSTLDMLIPANAVGKVLGKGGANIANIRKISGASIEISDNK---SARGD 599
Query: 305 RKVTISGPQRSIRTAESMI 323
R ISG R AE++I
Sbjct: 600 RIALISGTPEQKRAAENLI 618
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 128/316 (40%), Gaps = 60/316 (18%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R L + + G+VIGK G IN + ++ A++++ + FPG+ DR+I I + E
Sbjct: 40 RILCPDEVIGSVIGKNGKVINSIRQETRAKVKVV---DPFPGSKDRVITIYCYVKE---K 93
Query: 98 VDLVIDK-------------LLTELHAE---------DQADDVGTKTKLRLIVPNSSCGS 135
D+ ID L ++H D + + +++VP+S +
Sbjct: 94 EDVEIDDEFAGKEPLCAAQDALLKVHVAIANSIAAIGDSEKKRKDRDECQILVPSSQSAN 153
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL---EL 187
IIGKAGATIK ++A IK++ D HS D V +TG + RAL
Sbjct: 154 IIGKAGATIKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGESEAVKRALFAVSS 213
Query: 188 ILLKLSEDTLYSQTMTVPYTYAGVFF-SGFHGMPYGAVPP---PV---PAVPHNTAAHYG 240
I+ K S VP + S P G + P P+ AVP A
Sbjct: 214 IMYKFGPREDISLDTAVPEAPPSIIIPSDVPVYPPGGLYPASDPIVTPRAVPQIIGATNV 273
Query: 241 PNMGGRKFQNNK---------------DDRTNSLTIG--VADEHIGFVVGRGGRNIMEIS 283
P++ G N R+ L I + IG V+G+GG I +
Sbjct: 274 PDLQGYADAGNSWPMYSSALPVVSGVGASRSEELIIRMLCPSDKIGRVIGKGGSTIKSMR 333
Query: 284 QISGARIKVSDRGDFF 299
Q SGA I+V D F
Sbjct: 334 QASGAHIEVDDSKANF 349
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 37/312 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + AGAVIGKGG +I +++ A + + S T +RI+ I ID ++R
Sbjct: 40 LRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQ-----TPERIVTIVAEIDNVIR 94
Query: 97 AVDLVIDKLLTELHAEDQADDVGT---KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
V+ +I +L L D +DD G+ +++LRL+V S G+IIG+ G IK +++
Sbjct: 95 CVNEIIPRLDECLKTRD-SDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETST 153
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
+K+ +R++ + G ++ + + LI+ L E + + Y +F+
Sbjct: 154 QLKV--YSQCCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPSR----PYESMFY 207
Query: 214 SGFHGMPYGAVPPP-----------------VPAVPHNTAAHYGPNMG-GRKFQNNKDDR 255
YG PP P P G MG
Sbjct: 208 DPNFVHEYGGFPPDRNYRGMGPRGGMYGGGLPPRAPRFPYGGRGMGMGVSPFPPAPFGGP 267
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
+ + + +E G ++G+GG I I + SGA I V + SER +TISG
Sbjct: 268 MQTTQVTIPNELGGTIIGKGGERINRIREESGAHIVVEPQ----QPNSERIITISGSHAQ 323
Query: 316 IRTAESMIMQKV 327
I+TA+ ++ Q +
Sbjct: 324 IQTAQYLLQQWI 335
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K +LRL+VP+ G++IGK G +IK + A + I +R+VT+ +D
Sbjct: 37 KYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTP-----ERIVTIVAEIDN 91
Query: 181 QMRALELILLKLSE 194
+R + I+ +L E
Sbjct: 92 VIRCVNEIIPRLDE 105
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 147/330 (44%), Gaps = 61/330 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + SGARI +S + +RI+ I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEGN-----CPERIVTXXXXXXXIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G + ++ ++ I + + E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGAPEAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 186
Query: 209 AGVFFSG--FHGMPYGAVPP---------PVP--------AVPH---------------- 233
V FSG P GA P+P A+PH
Sbjct: 187 TPVIFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPF 246
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
P G N T+ LTI ++ IG ++GR G I EI Q+SGA+IK++
Sbjct: 247 TPLGQTTPAFPGLDASNQAS--THELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIA 302
Query: 294 DRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ G+SER++TI+G +I A+ +I
Sbjct: 303 NA---MEGSSERQITITGTPANISLAQYLI 329
>gi|367043886|ref|XP_003652323.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
gi|346999585|gb|AEO65987.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
Length = 482
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 157/369 (42%), Gaps = 80/369 (21%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 124 HIRAVISSPEAATVIGKGGENVSKIRQMSGAKCTVS---DYQKGAVERILTVSGIVDAVA 180
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E ++ + +KT LRL++P+ GSIIGK GA IK + S A
Sbjct: 181 KAFGLIIRTLNNE--PLNEPSNQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGAR 238
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRAL----ELILLKLSE---------------- 194
+ S D +R + + G D A +L +L+E
Sbjct: 239 LNAS--DSCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRSGG 296
Query: 195 --DTLYSQTMTVPYTYAGV---------FFSG------FHGMPYGAVPP--------PVP 229
T+ VPY ++ G +H P PP P P
Sbjct: 297 PAGTVPGGMQVVPYNPQPAGGNYGNRDNYYRGRQDPRAYHMPPQSYAPPYGHPHPAIPNP 356
Query: 230 AV---------------PHNTAAHYGP-------NMGGRKFQNNKDDRTNSLT--IGVAD 265
AV PH H GP G+ LT I + +
Sbjct: 357 AVPMPYGAHAAGGYGAGPHVPVHHAGPAGPHGHAGPHGQPMPGGAGMPGAPLTQQIYIPN 416
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+GG+ I EI QISG+ IK+++ D ++ER VTI+G + R A M+
Sbjct: 417 DMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEECNRIALYMLYS 473
Query: 326 KVAYASDRL 334
++ R+
Sbjct: 474 RLESEKHRI 482
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 407 PLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEEC 463
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 464 NRIALYMLYSRLESEKH 480
>gi|320591828|gb|EFX04267.1| kh domain containing RNA-binding protein [Grosmannia clavigera
kw1407]
Length = 476
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 171/388 (44%), Gaps = 84/388 (21%)
Query: 19 STAPVKSLSSDPTEKPTYI--RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
+TAP ++ ++ ++ ++I R ++S+P A +IGKGG ++ + S A+ +S ++
Sbjct: 99 NTAPSQTAPANAHDETSWIHIRAVISSPEAATIIGKGGENVSKIRQMSNAKCTVS---DY 155
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGS 135
G +RI+ +SG +D + +A L+I L E E + +KT LRL++P+ GS
Sbjct: 156 QKGAVERILTVSGVVDAVAKAFGLIIRTLNNEPLGE--PSNAHSKTYPLRLLIPHILIGS 213
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL----ELILLK 191
IIGK G+ IK + S A + S D ++R + + G D A +L +
Sbjct: 214 IIGKGGSRIKEIQEASGARLNAS--DSCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQ 271
Query: 192 LSE------DTLYS------------QTMTVPY-------TY-------------AGVFF 213
L+E + Y+ VPY +Y A +
Sbjct: 272 LNERFGGPAASAYAARGGGPVGVVPGGMQVVPYLPQPAGGSYGRTENYSRRQDPRAQLPP 331
Query: 214 SGFHGMPYGAV----PPPV--------------PAVPHNTAAHYG----------PNMGG 245
G+ G PYGA P P P +PH AAH+G P G
Sbjct: 332 QGY-GAPYGAPIAHGPGPAVPMYGAQAAGAYGAPQLPHQNAAHHGAMPHGPHAGQPPHAG 390
Query: 246 RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+ I + ++ +G ++G+GG+ I EI Q+SG+ IK+++ D ++ER
Sbjct: 391 PGGHPAMAGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQD---NSNER 447
Query: 306 KVTISGPQRSIRTAESMIMQKVAYASDR 333
VTI+G + R A M+ ++ R
Sbjct: 448 LVTITGTEECNRMALYMLYSRLESEKHR 475
>gi|405976740|gb|EKC41236.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Crassostrea
gigas]
Length = 416
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 139/309 (44%), Gaps = 37/309 (11%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
LV + GA+IGK G TI++ S+S AR+ + R +TD ++ I G+ + +A
Sbjct: 12 ILVGSEYVGAIIGKQGQTIHNITSESRARVDIHRRDGL---STDTLVTIKGSPENCSKAC 68
Query: 99 DLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
++ + +E + ++ + L++I PNS CG IIGK G IKSFM+ + I +S
Sbjct: 69 KEIMKIVESEAQSLNKGE-----PPLKIICPNSLCGRIIGKQGNVIKSFMEQTGTHIVVS 123
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF------ 212
DR++T+TG+ + +A L+ K+ + + Q T G+F
Sbjct: 124 SATDMNNFFVDRVITITGSPENTSKAEALVSEKMRK--CFEQDAQNYNTQMGMFGGMPPM 181
Query: 213 FSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVV 272
+ + PP P +YG GG Q D L I + +G +
Sbjct: 182 PNMMPPYNFQRGPPYPPYQMQGDGFYYG--QGGPPQQ---DLEVTYLYI--PESTVGACI 234
Query: 273 GRGGRNIMEISQISGARIKVSD-----------RGDFFSGT---SERKVTISGPQRSIRT 318
G G NI EI ++SGARIK+ + GD T ERKV I+G +
Sbjct: 235 GSKGSNIKEIMRLSGARIKIENPQMQSGKNGDMNGDRKGPTPPLEERKVIITGTAEAQWK 294
Query: 319 AESMIMQKV 327
A+ + K+
Sbjct: 295 AQFYVFDKI 303
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 119/335 (35%), Gaps = 114/335 (34%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ + N L G +IGK G+ I F Q+G I +S + + DR+I I+G+ + +
Sbjct: 89 LKIICPNSLCGRIIGKQGNVIKSFMEQTGTHIVVSSATDMNNFFVDRVITITGSPENTSK 148
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKL-------------------------------- 124
A LV +K+ E A + T+ +
Sbjct: 149 AEALVSEKMRKCF--EQDAQNYNTQMGMFGGMPPMPNMMPPYNFQRGPPYPPYQMQGDGF 206
Query: 125 ---------------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYG- 166
L +P S+ G+ IG G+ IK M S A IKI ++ G
Sbjct: 207 YYGQGGPPQQDLEVTYLYIPESTVGACIGSKGSNIKEIMRLSGARIKIENPQMQSGKNGD 266
Query: 167 -----------LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
L +R V +TGT + Q +A + K+ +
Sbjct: 267 MNGDRKGPTPPLEERKVIITGTAEAQWKAQFYVFDKIKTE-------------------- 306
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
GG FQ ++ S + V IG ++G+G
Sbjct: 307 ----------------------------GG--FQRIEEVHLRSEVL-VPRSMIGRIIGKG 335
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
G+N+ E+ ++SGA +KV D+ + +V +S
Sbjct: 336 GQNVREMQRVSGAIVKVPDQNSQTQSDGDMEVAVS 370
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G D
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPDNCTN 144
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 145 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + Y L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 200 VSSINDINSYNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAIAPQS---LMFPG 255
Query: 216 FHGMPYGAVPP---------PVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
H M + P P P+ + ++ F N+ + T + + +
Sbjct: 256 LHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPAFPNDMQETT---YLYIPNN 312
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+G ++G G +I I + S A +K++ D +ERKVTI G A+ MI
Sbjct: 313 AVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIF 372
Query: 325 QKV 327
+K+
Sbjct: 373 EKM 375
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 307 LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 366
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ GF M
Sbjct: 367 AQYMIFEKMREE-------------------GF--------------------------M 381
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
G DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 382 CG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 435
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I G S+++A+ I
Sbjct: 436 DEETPVHIIGQFYSVQSAQRRI 457
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 302 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVG 359
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 360 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 416
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 417 VTGSVIKL 424
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 143/313 (45%), Gaps = 39/313 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + AGAVIGKGG +I +++ A + + S T +RI+ I ID ++R
Sbjct: 107 LRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQ-----TPERIVTIVAEIDNVIR 161
Query: 97 AVDLVIDKLLTELHAEDQADDVGT---KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
V+ +I +L L D +DD G+ +++LRL+V S G+IIG+ G IK +++
Sbjct: 162 CVNEIIPRLDECLKTRD-SDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETST 220
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT---YAG 210
+K+ +R++ + G ++ + + LI+ L E + + PY Y
Sbjct: 221 QLKV--YSQCCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPSR--PYESMFYDP 276
Query: 211 VFFSGFHGMP---------------YGAVPPPVPAVPHNTAAHYGPNMG-GRKFQNNKDD 254
F + G P G +PP P P+ G MG
Sbjct: 277 NFVHEYGGFPPDRNYRGMGPRGGMYGGGLPPRAPRFPYGGR---GMGMGVSPFPPAPFGG 333
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
+ + + +E G ++G+GG I I + SGA I V + SER +TISG
Sbjct: 334 PMQTTQVTIPNELGGTIIGKGGERINRIREESGAHIVVEPQ----QPNSERIITISGSHA 389
Query: 315 SIRTAESMIMQKV 327
I+TA+ ++ Q V
Sbjct: 390 QIQTAQYLLQQCV 402
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K +LRL+VP+ G++IGK G +IK + A + I +R+VT+ +D
Sbjct: 104 KYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTP-----ERIVTIVAEIDN 158
Query: 181 QMRALELILLKLSE 194
+R + I+ +L E
Sbjct: 159 VIRCVNEIIPRLDE 172
>gi|358400710|gb|EHK50036.1| hypothetical protein TRIATDRAFT_51252 [Trichoderma atroviride IMI
206040]
Length = 477
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 160/367 (43%), Gaps = 81/367 (22%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 119 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGIVDAVA 175
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E +E A +KT LRL++P+ GSIIGK G+ I+ + S A
Sbjct: 176 KAFGLIIRTLNNEPLSE--ASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGAR 233
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRAL----ELILLKLSE---------------- 194
+ S D ++R + + G D A +L +L+E
Sbjct: 234 LNAS--DSCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPGASAYATRSGA 291
Query: 195 --DTLYSQTMTVPYT-------YAGVFFSG-------------------FHGMPYGAVPP 226
++ VPY+ Y G HG P+GA P
Sbjct: 292 PVGSIPGGMQVVPYSPQPASGHYGRAENYGRHQERRPHHMPPAPYPQPYAHGAPHGA--P 349
Query: 227 PVP-------------AVPH---NTAAHYGPNM----GGRKFQNNKDDRTNSLTIGVADE 266
+P A PH + A H GP G+ + I + ++
Sbjct: 350 AIPMQYGAGQPAAYGAAAPHVQPHMAPHTGPQAHGAPQGQPMHAGMPGGPITQQIYIPND 409
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+G ++G+GG+ I EI Q+SG+ IK+++ D ++ER VTI+G + R A M+ +
Sbjct: 410 MVGAIIGKGGQKINEIRQMSGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLYSR 466
Query: 327 VAYASDR 333
+ +R
Sbjct: 467 LGETQNR 473
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 12 PDVHGKRSTAPVKS-LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
P HG P+ + + P + YI N + GA+IGKGG IN+ + SG+ I++
Sbjct: 380 PQAHGAPQGQPMHAGMPGGPITQQIYI----PNDMVGAIIGKGGQKINEIRQMSGSVIKI 435
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ + + +R++ I+GT + A+ ++ +L
Sbjct: 436 NEPQD---NSNERLVTITGTEECNRMALYMLYSRL 467
>gi|345311367|ref|XP_001520914.2| PREDICTED: poly(rC)-binding protein 4-like [Ornithorhynchus
anatinus]
Length = 447
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 148/343 (43%), Gaps = 74/343 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 19 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTGAVFH 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L +K LRL++P S CGS+IGKAGA IK + + A
Sbjct: 74 AVSMIAFKLDEDLCTGPPNGGSVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 134 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 187
Query: 209 AGVFFS------------------GFH------GMP-----------------YGAVPPP 227
V S +H G P G +PPP
Sbjct: 188 GTVLLSTNQVANIAIQKQERGSNRQYHQVEHGSGQPGKLRGNGQEAVEVAAVSMGPLPPP 247
Query: 228 VPAVPHNTAAHYGPNMGGRKFQN-------NKDDRTNSLTIGVADEHIGFVVGRGGRNIM 280
P V GP + F + + +T+S V ++ IG V+GR G I
Sbjct: 248 EPKV-SKLQQLSGPPV---PFTSPSVVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKIS 303
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
EI Q+SGA IK+ G+ G+ ER VTI+G SI A+ +I
Sbjct: 304 EIRQMSGAHIKI---GNQTEGSGERHVTITGSPVSIALAQYLI 343
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG
Sbjct: 97 SKPPVTLRLVIPASQCGSLIGKAGAKIKEIRESTGAQVQV--AGDLLPNSTERAVTVSGV 154
Query: 91 IDEILRAVDLVIDKLL 106
D I+ V + +L
Sbjct: 155 PDAIILCVRQICAVIL 170
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G+ +R + I+
Sbjct: 274 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQTE---GSGERHVTIT 330
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 331 GSPVSIALAQYLITACLET 349
>gi|406697218|gb|EKD00483.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 8904]
Length = 793
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 150/329 (45%), Gaps = 36/329 (10%)
Query: 10 PSPDVHGKRSTAP--VKSLSSDPTEKPTY---IRFLVSNPLAGAVIGKGGSTINDFQSQS 64
P P S P + + + P+E P +R L+ A +IG+ G+ +N+ + +S
Sbjct: 58 PGPSTGATISAPPTSIPATPAKPSEPPAQQISMRALIVTQDASVIIGRAGAHVNEIREKS 117
Query: 65 GARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-K 123
GAR+ +S S PG +RI+ + G +D + +A L++ ++ E D A G++
Sbjct: 118 GARVTISES---IPGNPERILNVFGALDAVSKAFGLIVRRINDEPF--DVASVPGSRAVT 172
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++ I+PNS GS+IG+ G+ IK D S A + S + G +R+++++G D
Sbjct: 173 IKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEV--MLPGSTERILSVSGVADAIHI 230
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A+ I L E Y + P++ G + GM A + P
Sbjct: 231 AVYYIGTILLE---YQERNPGPHSGIGTYRQQPQGM----------AAAQPSFTGVAPGA 277
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF----- 298
GG ++ + I + + +G ++G+ G I EI S +I+V++ G
Sbjct: 278 GGASAPGSQTQQ-----IFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQ 332
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VTI+G +I A M+ ++
Sbjct: 333 PANPDERLVTITGQPVNINIAVQMLYHRL 361
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 146/305 (47%), Gaps = 16/305 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGK G IN+ + +S AR+ +S E PG +RI+ +SG +D + +
Sbjct: 115 MRTLIVTSDASIIIGKSGKHINEIRDKSNARLNIS---EIIPGNPERILTVSGPLDAVSK 171
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ ++ E DQ G+K+ +R IVPNS GS+IGK G+ IK + S A
Sbjct: 172 AFGLIVRRINDEPF--DQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGA-- 227
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+++ + G +R+++++G D A+ + L E + +PY S
Sbjct: 228 RLTAGEAMLPGSTERVLSISGVADAVHIAVYYVGTILLEHQDRNAN-NLPYRPTAGGPST 286
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDR---TNSLTIGVADEHIGFVV 272
P GA P P P A P G + + I + ++ +G ++
Sbjct: 287 RPPAP-GANPYAAPQQPFGYGAPAPPFGGAPAGAGGAPQLPPGSQTQQIFIPNDLVGCII 345
Query: 273 GRGGRNIMEISQISGARIKVSD---RGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAY 329
G+GG I EI +S + IK+ + +ER VTI+GP +I+ A S++ Q++
Sbjct: 346 GKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNIQMAVSLLYQRLEQ 405
Query: 330 ASDRL 334
RL
Sbjct: 406 EKMRL 410
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 60/223 (26%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P K IRF+V N G+VIGK GS I + Q SGAR L+ PG+T+R++ ISG
Sbjct: 191 PGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGAR--LTAGEAMLPGSTERVLSISG 248
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDV------------------------------- 118
D + AV V LL H + A+++
Sbjct: 249 VADAVHIAVYYVGTILLE--HQDRNANNLPYRPTAGGPSTRPPAPGANPYAAPQQPFGYG 306
Query: 119 ---------------------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
G++T+ ++ +PN G IIGK G+ I S + IKI
Sbjct: 307 APAPPFGGAPAGAGGAPQLPPGSQTQ-QIFIPNDLVGCIIGKGGSKINEIRSMSASHIKI 365
Query: 158 ---SRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
+ N+RLVT+TG A+ L+ +L ++ +
Sbjct: 366 MEPGAGIAAGGSGNERLVTITGPPPNIQMAVSLLYQRLEQEKM 408
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 58/201 (28%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D ++ T+ +R ++ S IIGK+G I D S A + IS + G +R++
Sbjct: 104 DSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEI---IPGNPERIL 160
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T++G LD +A LI+ +++++ P+ P+VP
Sbjct: 161 TVSGPLDAVSKAFGLIVRRINDE---------PFDQ--------------------PSVP 191
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIG--VADEHIGFVVGRGGRNIMEISQISGARI 290
+ S+TI V + +G V+G+ G I EI + SGAR+
Sbjct: 192 G----------------------SKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARL 229
Query: 291 KVSDRGDFFSGTSERKVTISG 311
+ G++ER ++ISG
Sbjct: 230 TAGEA--MLPGSTERVLSISG 248
>gi|302842809|ref|XP_002952947.1| hypothetical protein VOLCADRAFT_93708 [Volvox carteri f.
nagariensis]
gi|300261658|gb|EFJ45869.1| hypothetical protein VOLCADRAFT_93708 [Volvox carteri f.
nagariensis]
Length = 487
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSG-ARIQLSRSHEFFPGTTDRIIMISGTIDE 93
++ VSN LAG++IG+GG + Q SG ARIQLSR +E + GT+DR+++++GT+
Sbjct: 38 VLMKLCVSNALAGSIIGRGGHNRDQLQLISGGARIQLSRPNELYSGTSDRVLVLTGTLGS 97
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+ A+ + L +A +G T+ +LI+P+S CG I+G G T+++ + A
Sbjct: 98 CITALFAISGCLGMPGPLPLEAVFMGVSTQWKLILPSSVCGYILGAGGRTVRAITAQADA 157
Query: 154 VIKIS-RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
I IS D +R+ T++G + +RA+ +I+ KL
Sbjct: 158 NISISAEPDRDAELPRERIATISGGCLQTLRAMGIIVDKL 197
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 51/199 (25%)
Query: 116 DDVGTKTKL-RLIVPNSSCGSIIGKAGATIKSF-MDDSQAVIKISRLDHSYYGLNDRLVT 173
D++G + L +L V N+ GSIIG+ G + A I++SR + Y G +DR++
Sbjct: 31 DELGGQVVLMKLCVSNALAGSIIGRGGHNRDQLQLISGGARIQLSRPNELYSGTSDRVLV 90
Query: 174 LTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPH 233
LTGTL + AL I SG GMP P P+ AV
Sbjct: 91 LTGTLGSCITALFAI-------------------------SGCLGMPG---PLPLEAVFM 122
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
+ + + + G+++G GGR + I+ + A I +S
Sbjct: 123 GVSTQW--------------------KLILPSSVCGYILGAGGRTVRAITAQADANISIS 162
Query: 294 DRGDFFSGTS-ERKVTISG 311
D + ER TISG
Sbjct: 163 AEPDRDAELPRERIATISG 181
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS----RSHEFFPGTTDRIIMISGT 90
T + ++ + + G ++G GG T+ +Q+ A I +S R E +RI ISG
Sbjct: 126 TQWKLILPSSVCGYILGAGGRTVRAITAQADANISISAEPDRDAEL---PRERIATISGG 182
Query: 91 IDEILRAVDLVIDKLLTE 108
+ LRA+ +++DKLLT
Sbjct: 183 CLQTLRAMGIIVDKLLTR 200
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISG-ARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + V++ G ++GRGG N ++ ISG ARI++S + +SGTS+R + ++G S
Sbjct: 40 MKLCVSNALAGSIIGRGGHNRDQLQLISGGARIQLSRPNELYSGTSDRVLVLTGTLGSCI 99
Query: 318 TA 319
TA
Sbjct: 100 TA 101
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE-----RKVTISGPQ 313
++I V + +G ++GRGG + + ++ I ++ R +G R+VTISG +
Sbjct: 392 VSIEVPENRVGLLIGRGGETLHWMQRLLNVSINIARRPPPPAGEGPLPDALRRVTISGAR 451
Query: 314 RSIRTAESMIMQKV 327
++ A + I+Q++
Sbjct: 452 NAVNIAHAFILQRL 465
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 40/318 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI S AR+ + R G+ ++ I I G D
Sbjct: 145 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNV--GSLEKAITIYGNPDNCTN 202
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT-----------KLRLIVPNSSCGSIIGKAGATIK 145
A +++ + E + ++ D G+ + L+++ N+ G IIGK G TIK
Sbjct: 203 ACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKILAHNNLIGRIIGKGGNTIK 262
Query: 146 SFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLY 198
M D+ I +S + D + + L +R++T+ GT++ +A +I KL + +
Sbjct: 263 RIMQDTDTKITVSSINDINSFNL-ERIITVKGTIENMSKAESMISSKLRQSYENDLQAMA 321
Query: 199 SQTMTVP-------YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNN 251
Q+M P + AG+ +S YG+ P P P P
Sbjct: 322 PQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLQTQQGVP---------- 371
Query: 252 KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTI 309
D + + + + +G ++G G +I I + SGA +K++ ++ +ERKVTI
Sbjct: 372 ASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTI 431
Query: 310 SGPQRSIRTAESMIMQKV 327
G S A+ +I +K+
Sbjct: 432 VGSPESQWKAQYLIFEKM 449
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 58/207 (28%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ L D +R VT+ G+ + Q +
Sbjct: 381 LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWK 440
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ S T V T
Sbjct: 441 AQYLIFEKMREEGYVSGTEDVRLT------------------------------------ 464
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD-RGDFFSGT 302
+ I V +G ++G+GG+N+ E+ +++G+ IK+S+ + S
Sbjct: 465 ---------------IEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAD 509
Query: 303 SERKVTISGPQRSIRTAE----SMIMQ 325
E V I GP S+++A+ +M++Q
Sbjct: 510 EETTVHIIGPFFSVQSAQRRIRAMVLQ 536
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 41/211 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++V + G+IIG+ G+TI+ S+A + + R D+ G ++ +T+ G D
Sbjct: 145 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDN--VGSLEKAITIYGNPDNCTN 202
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + IL + ++ T G + G + +GAV
Sbjct: 203 ACKKILEVMQQE--------ANNTNKG-YDEGSNSDDHGAV------------------- 234
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+ +L I + IG ++G+GG I I Q + +I VS D S
Sbjct: 235 ---------NSYEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNL 285
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ AESMI K+ +Y +D
Sbjct: 286 ERIITVKGTIENMSKAESMISSKLRQSYEND 316
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG--TTDRIIMIS 88
T++ T++ + N GA+IG GS I + SGA ++++ + P T+R + I
Sbjct: 375 TQETTFL--YIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIV 432
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G+ + +A L+ +K+ E + D + + ++VP++ G IIGK G ++
Sbjct: 433 GSPESQWKAQYLIFEKMREEGYVSGTED---VRLTIEILVPSAQVGRIIGKGGQNVRELQ 489
Query: 149 DDSQAVIKIS 158
+ +VIK+S
Sbjct: 490 RVTGSVIKLS 499
>gi|194387672|dbj|BAG61249.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 36/284 (12%)
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
+ +SGARI +S + +RII ++G + I +A ++IDKL ++ +
Sbjct: 1 MREESGARINISEGN-----CPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAA 55
Query: 120 TK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLT 175
++ LRL+VP S CGS+IGK G IK + + A ++++ L +S +R +T+
Sbjct: 56 SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNS----TERAITIA 111
Query: 176 GTLDEQMRALELILLKLSEDTLYS--QTMTVPY---------TYAGVFFSGFHGMPYGAV 224
G + ++ I + + E S + +T+PY +AG + H +
Sbjct: 112 GIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQS 171
Query: 225 PPPVPAVPHNTAAHYG-----PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNI 279
P + H G P + G + + +T S + + ++ IG ++GR G I
Sbjct: 172 HFP---MTHGNTGFSGIESSSPEVKGY-WGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 227
Query: 280 MEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 228 NEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 268
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 92/230 (40%), Gaps = 65/230 (28%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 52 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAIT 109
Query: 87 ISGTIDEILRAVD----LVIDKL---------------------------LTELH--AED 113
I+G I+ V ++++ L LT+LH A
Sbjct: 110 IAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQ 169
Query: 114 QA---------------------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
Q+ D T L +PN G IIG+ GA I
Sbjct: 170 QSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINE 229
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IKI+ + G DR VT+TG+ A LI ++LS +T
Sbjct: 230 IRQMSGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 276
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 26/303 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E ++ ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 145 ACKRILEVMQQEANSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 200 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 255
Query: 216 FHGMPYGAVPP---------PVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
H M + P P P+ + N+ F N+ + T + + +
Sbjct: 256 LHPMAMMSTPGNGMVFNTSMPFPSCQGFAMSKTPANVVPPVFPNDMQETT---YLYIPNN 312
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+G ++G G +I I + S A +K++ D +ERKVTI G A+ MI
Sbjct: 313 AVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTIVGTPEGQWKAQYMIF 372
Query: 325 QKV 327
+K+
Sbjct: 373 EKM 375
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ +D +R VT+ GT + Q +
Sbjct: 307 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTIVGTPEGQWK 366
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ T
Sbjct: 367 AQYMIFEKMREEGFMCGT------------------------------------------ 384
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 385 ---------DDVRLTIELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 435
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I GP S+++A+ I
Sbjct: 436 DEETPVHIIGPFYSVQSAQRRI 457
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 302 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTIVG 359
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 360 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTIELLVASSQVGRIIGKGGQNVRELQR 416
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 417 VTGSVIKL 424
>gi|238836386|gb|ACR61401.1| IGF-II mRNA-binding protein 2a variant B [Danio rerio]
Length = 542
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 31/313 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +++ + R G ++ I I T +
Sbjct: 200 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCST 257
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E +D+ L+++ NS G +IGK G +K +D++ I
Sbjct: 258 ACHMIMDIMQKEAVDTKVTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTETKIT 313
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---Y 206
IS L D + Y +R + + G+++ RA I+ KL E + Q+ +P
Sbjct: 314 ISSLQDLTIYN-PERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPGLSL 372
Query: 207 TYAGVFFSGFHGMPYGAVP---PPVPAVPHN--------TAAHYG-PNMGGRKFQNNKDD 254
+ G+F +G +P A P PPVP +N YG P G Q+ +
Sbjct: 373 SALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGGLYGVPPASGISHQHTQAP 432
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
+ + + + +G ++G+ G++I ++++ +GA IK++ ++R V I+GP
Sbjct: 433 EQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PDVTQRMVIITGPPE 490
Query: 315 SIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 491 AQFKAQGRIFGKL 503
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 22 PVKSLSSDPTEKPT--YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P +S T+ P + + GA+IGK G I +GA I+++ + P
Sbjct: 420 PASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PD 477
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
T R+++I+G + +A + KL E + ++V +T ++ VP+S+ G +IGK
Sbjct: 478 VTQRMVIITGPPEAQFKAQGRIFGKLKEE-NFFTAKEEVKLETHIK--VPSSAAGRVIGK 534
Query: 140 AGATIK 145
G T++
Sbjct: 535 GGKTVR 540
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK G IK + A IKI+ + + R+V +TG + Q +A
Sbjct: 439 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESP--DVTQRMVIITGPPEAQFKAQ 496
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 497 GRIFGKLKEENFFT 510
>gi|403286483|ref|XP_003934516.1| PREDICTED: poly(rC)-binding protein 1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286485|ref|XP_003934517.1| PREDICTED: poly(rC)-binding protein 1-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 154/342 (45%), Gaps = 69/342 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK ++ + +SGAR +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKNEESVKRIREESGARFSISEGN-----CPERIITLTGPTCAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMMINKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLT---GTLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
+++S L +S ++ +T+ ++ E ++ + L++L+ + M +PY
Sbjct: 131 VQVSGDMLPNS----TEQAITVAVVPQSVTECVQQICLVMLETLPQCPQGRVMPIPYQPM 186
Query: 207 ------TYAGVFFSG--FHGMPYG----AVPP-------------PVPAVPHNTAA---- 237
T AG G G P+ VPP P+ N A
Sbjct: 187 PASSPVTCAGGQDRGSDAAGYPHATRDLGVPPLDACSTQGQHTISPLHLAKLNQVARQQS 246
Query: 238 -----HYGPNMGG-----------RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H G G R + T+ LTI + IG ++GR G NI E
Sbjct: 247 HIAMLHGGTGFAGIESSSPEVKGYRASLDASTQTTHELTI--PNNLIGCIIGRQGVNINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLI 343
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G R+ S D + + T+ + N L G +IG+ G IN+ + SGA+I++
Sbjct: 264 SPEVKGYRA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGVNINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
+ E G++ R + I+G+ I A L+ +L +E ++VG+
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLFSEKGMGCSYNNVGS 362
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ S + P +T++ I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--SGDMLPNSTEQAIT 147
Query: 87 IS---GTIDEILRAVDLVIDKLLTEL 109
++ ++ E ++ + LV+ + L +
Sbjct: 148 VAVVPQSVTECVQQICLVMLETLPQC 173
>gi|395333911|gb|EJF66288.1| hypothetical protein DICSQDRAFT_159257 [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 154/332 (46%), Gaps = 49/332 (14%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
STAP + S ++R L+ A +IGKGGS +N+ + +SGAR+ +S E P
Sbjct: 85 STAPGGTGSGSTPAANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVS---ESIP 141
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSII 137
G +RI+ +SG +D + +A L++ ++ E D+ G++ ++ ++PNS GS+I
Sbjct: 142 GNPERILNVSGPLDAVSKAFGLIVRRINDEPF--DKPSVPGSRAVTIKFMIPNSRMGSVI 199
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA---LELILLKLSE 194
GK G IK D S A + S + G +RL++++G D A + IL++ +E
Sbjct: 200 GKGGTKIKEIQDASGARLNAS--EGMLPGSTERLLSVSGVADAIHIATYYIGNILIEANE 257
Query: 195 ------DTLY---SQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
+ Y SQ+ PY + G+ A + P GG
Sbjct: 258 RMPSSNHSTYRPTSQSRRPPY-MGSSYVPGYA------------PAAAAAATAHNPYAGG 304
Query: 246 RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS-- 303
Q + I + ++ +G ++G+GG I EI +S ++IK+ + G G +
Sbjct: 305 PPSQ------LQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGMNGA 358
Query: 304 --------ERKVTISGPQRSIRTAESMIMQKV 327
ER V I+G +I+ A ++ ++
Sbjct: 359 PAPAGSEGERLVVITGQPANIQMAVQLLYSRL 390
>gi|146416151|ref|XP_001484045.1| hypothetical protein PGUG_03426 [Meyerozyma guilliermondii ATCC
6260]
Length = 342
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 141/318 (44%), Gaps = 69/318 (21%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG+ G I+ + ++ + +SR PG+ +RI+ +SGT+D+ RA
Sbjct: 63 RVLVSAKEAGCLIGQNGQVIDSIRQETNTKAGISR---LQPGSHERILTVSGTLDDAARA 119
Query: 98 VDLVIDKL---------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
+ L L +L + G T LRL++PN+ G++IG G
Sbjct: 120 LSYFAQALCNANTETFSTYSYFPLKQLSLTPCVE--GETTILRLLIPNAQMGTLIGSKGV 177
Query: 143 TIKSFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
I+ QA IS + + G N+RLV L GT+++ L +I L ED +S
Sbjct: 178 RIQQI----QANFHISMIASKSFLPGSNERLVELQGTVNDLYDTLRVISRCLIED--FSS 231
Query: 201 TMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSL- 259
+T Y +P G NT + G DR +SL
Sbjct: 232 IVTTSYY-----------IPRGG----------NTTKYRG------------TDRRSSLP 258
Query: 260 ----TIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
T+ +E +G ++G+ G I + ++SGA I +S+ D G +ER+ TISG +
Sbjct: 259 GISTTLYFPNEIVGALIGKNGSRIQGVRKVSGASIGISEEVD---GKTEREFTISGSSHA 315
Query: 316 IRTAESMIMQKVAYASDR 333
+ A+ ++ + R
Sbjct: 316 VEKAKDLLYHNLEREEQR 333
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LS P + T +R L+ N G +IG G I Q Q+ I + S F PG
Sbjct: 142 PLKQLSLTPCVEGETTILRLLIPNAQMGTLIGSKGVRIQ--QIQANFHISMIASKSFLPG 199
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV-----GTKTKLR--------- 125
+ +R++ + GT++++ + VI + L E + G TK R
Sbjct: 200 SNERLVELQGTVNDLYDTLR-VISRCLIEDFSSIVTTSYYIPRGGNTTKYRGTDRRSSLP 258
Query: 126 -----LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
L PN G++IGK G+ I+ S A I IS G +R T++G+
Sbjct: 259 GISTTLYFPNEIVGALIGKNGSRIQGVRKVSGASIGIS---EEVDGKTEREFTISGSSHA 315
Query: 181 QMRALELILLKLSED 195
+A +L+ L +
Sbjct: 316 VEKAKDLLYHNLERE 330
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 103 DKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
+K+ T L + + + R++V G +IG+ G I S ++ ISRL
Sbjct: 41 EKVSTSLPSVEDMSNASALINYRVLVSAKEAGCLIGQNGQVIDSIRQETNTKAGISRLQP 100
Query: 163 SYYGLNDRLVTLTGTLDEQMRAL 185
G ++R++T++GTLD+ RAL
Sbjct: 101 ---GSHERILTVSGTLDDAARAL 120
>gi|196001809|ref|XP_002110772.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
gi|190586723|gb|EDV26776.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
Length = 560
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 152/334 (45%), Gaps = 39/334 (11%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
++L+ P+ +R LV + GA+IG+ G+TI Q+ AR+ + R G+ ++
Sbjct: 127 RNLTRTPSHCEFPLRILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRESL--GSAEK 184
Query: 84 IIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-------KLRLIVPNSSCGSI 136
I I GT D A + + +EL + + + + L+++ N+ G +
Sbjct: 185 AITILGTPDSCTSAALQIAKIMQSELLSTNPQLKLKVEQGHPIPNIPLKILAHNNLIGRL 244
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK G IKS M+ + + I IS+L+ G ++R +T+ GT++ RA L+ KL +
Sbjct: 245 IGKNGNVIKSIMNQTNSKITISKLEDLKSGYSERTITVIGTVENSSRAEALLSAKLR--S 302
Query: 197 LYSQTMT--VPY---------------------TYAGVFFSGFHGMPYGAVPPPVPAVPH 233
Y Q M +P T + V SG + A P+ ++P+
Sbjct: 303 YYKQDMASMIPQRQGQSSANSNSNGSSYPLSNSTTSSVSDSG--SLIDSAAISPL-SIPN 359
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
+ + + N + N + D + I + + +V+G G + + QISGA +++
Sbjct: 360 SPSGLFSNNSVFLENDNVQSDEIETTAIYIPIQTFNYVIGARGNQLPALEQISGASLQLV 419
Query: 294 DRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+SG +ERKV ++G S A+ I KV
Sbjct: 420 Q--SMYSGANERKVVVNGNASSQWKAQLSIFNKV 451
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 49 VIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
VIG G+ + + SGA +QL +S + G +R ++++G +A + +K+
Sbjct: 397 VIGARGNQLPALEQISGASLQLVQS--MYSGANERKVVVNGNASSQWKAQLSIFNKVGEG 454
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
L ++++ +T++ +VP+ G IIGK G+T++ + A+I+I R
Sbjct: 455 LTP---SEELSLRTEI--LVPSPLVGRIIGKGGSTVRQLQSQTGAMIEIPR 500
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
LV +PL G +IGKGGST+ QSQ+GA I++ R
Sbjct: 467 ILVPSPLVGRIIGKGGSTVRQLQSQTGAMIEIPR 500
>gi|190347114|gb|EDK39328.2| hypothetical protein PGUG_03426 [Meyerozyma guilliermondii ATCC
6260]
Length = 342
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 67/317 (21%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG+ G I+ + ++ + +SR PG+ +RI+ +SGT+D+ RA
Sbjct: 63 RVLVSAKEAGCLIGQNGQVIDSIRQETNTKAGISR---LQPGSHERILTVSGTLDDAARA 119
Query: 98 VDLVIDKL---------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
+ L L +L + + G T LRL++PN+ G++IG G
Sbjct: 120 LSYFAQALCNANTETFSTYSYFPLKQLSSTPCVE--GETTILRLLIPNAQMGTLIGSKGV 177
Query: 143 TIKSFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
I+ QA IS + + G N+RLV L GT+++ L +I L ED +S
Sbjct: 178 RIQQI----QANFHISMIASKSFLPGSNERLVELQGTVNDLYDTLRVISRCLIED--FSS 231
Query: 201 TMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN--- 257
+T Y +P G NT + G D R++
Sbjct: 232 IVTTSYY-----------IPRGG----------NTTKYRG-----------TDRRSSSPG 259
Query: 258 -SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
S T+ +E +G ++G+ G I + ++SGA I +S+ D G +ER+ TISG ++
Sbjct: 260 ISTTLYFPNEIVGALIGKNGSRIQGVRKVSGASIGISEEVD---GKTEREFTISGSSHAV 316
Query: 317 RTAESMIMQKVAYASDR 333
A+ ++ + R
Sbjct: 317 EKAKDLLYHNLEREEQR 333
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 27/195 (13%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LSS P + T +R L+ N G +IG G I Q Q+ I + S F PG
Sbjct: 142 PLKQLSSTPCVEGETTILRLLIPNAQMGTLIGSKGVRIQ--QIQANFHISMIASKSFLPG 199
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV-----GTKTKLR--------- 125
+ +R++ + GT++++ + VI + L E + G TK R
Sbjct: 200 SNERLVELQGTVNDLYDTLR-VISRCLIEDFSSIVTTSYYIPRGGNTTKYRGTDRRSSSP 258
Query: 126 -----LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
L PN G++IGK G+ I+ S A I IS G +R T++G+
Sbjct: 259 GISTTLYFPNEIVGALIGKNGSRIQGVRKVSGASIGIS---EEVDGKTEREFTISGSSHA 315
Query: 181 QMRALELILLKLSED 195
+A +L+ L +
Sbjct: 316 VEKAKDLLYHNLERE 330
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 103 DKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
+K+ T L + + + R++V G +IG+ G I S ++ ISRL
Sbjct: 41 EKVSTSLPSVEDMSNASALINYRVLVSAKEAGCLIGQNGQVIDSIRQETNTKAGISRLQP 100
Query: 163 SYYGLNDRLVTLTGTLDEQMRAL 185
G ++R++T++GTLD+ RAL
Sbjct: 101 ---GSHERILTVSGTLDDAARAL 120
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 60/320 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G+ ++ I I G +
Sbjct: 189 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNV--GSLEKAITIYGNPENCTN 246
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E ++ ++ + L+++ N+ G IIGK G TIK M D+ I
Sbjct: 247 ACKKILEVMQQEANSINKGE-----ITLKILAHNNLIGRIIGKGGTTIKRIMQDTDTKIT 301
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ GT++ +A +I KL + + Q+M P
Sbjct: 302 VSSINDINSFNL-ERIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHP 360
Query: 206 ---YTYAGVFFS----GFHG-----MPYGAVPPPVPAVP----HNTAAHYGPNMGGRKFQ 249
+ AG+ +S G +G PY A PP VP TA Y PN
Sbjct: 361 MAMMSTAGMGYSSRGPGLYGSGPAPYPYQASLPPQQGVPATDTQETAFLYIPN------- 413
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKV 307
+G ++G G +I I + SGA +K++ ++ +ERKV
Sbjct: 414 ----------------SSVGAIIGTKGSHIRNIIRFSGASVKIAPIEQDKPAEQQTERKV 457
Query: 308 TISGPQRSIRTAESMIMQKV 327
TI G S A+ +I +K+
Sbjct: 458 TIVGSPESQWKAQYLIFEKM 477
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 58/207 (28%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PNSS G+IIG G+ I++ + S A +KI+ + D +R VT+ G+ + Q +
Sbjct: 409 LYIPNSSVGAIIGTKGSHIRNIIRFSGASVKIAPIEQDKPAEQQTERKVTIVGSPESQWK 468
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ + T
Sbjct: 469 AQYLIFEKMREEGFVAGT------------------------------------------ 486
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF-SGT 302
DD ++ I V +G ++G+GG+N+ E+ +++G+ IK+S++ S
Sbjct: 487 ---------DDVRLTIEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSAD 537
Query: 303 SERKVTISGPQRSIRTAE----SMIMQ 325
E V I GP S+++A+ SM++Q
Sbjct: 538 EEATVHIIGPFFSVQSAQRRIRSMVLQ 564
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P+P + + S P + + + T++ ++ + N GA+IG GS I + SGA ++
Sbjct: 383 PAPYPY-QASLPPQQGVPATDTQETAFL--YIPNSSVGAIIGTKGSHIRNIIRFSGASVK 439
Query: 70 LSRSHEFFPG--TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLI 127
++ + P T+R + I G+ + +A L+ +K+ E DDV + + ++
Sbjct: 440 IAPIEQDKPAEQQTERKVTIVGSPESQWKAQYLIFEKMREEGFVAG-TDDV--RLTIEIL 496
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
VP++ G IIGK G ++ + ++IK+S
Sbjct: 497 VPSAQVGRIIGKGGQNVRELQRVTGSIIKLS 527
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+L I + IG ++G+GG I I Q + +I VS D S ER +T+ G ++
Sbjct: 268 TLKILAHNNLIGRIIGKGGTTIKRIMQDTDTKITVSSINDINSFNLERIITVKGTIENMS 327
Query: 318 TAESMIMQKV--AYASD 332
AESMI K+ +Y +D
Sbjct: 328 KAESMISSKLRQSYEND 344
>gi|401880798|gb|EJT45110.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 2479]
Length = 793
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 149/329 (45%), Gaps = 36/329 (10%)
Query: 10 PSPDVHGKRSTAP--VKSLSSDPTEKPTY---IRFLVSNPLAGAVIGKGGSTINDFQSQS 64
P P S P + + + P+E P +R L+ A +IG+ G+ +N+ + +S
Sbjct: 58 PGPSTGATISAPPTSIPATPAKPSEPPAQQISMRALIVTQDASVIIGRAGAHVNEIREKS 117
Query: 65 GARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-K 123
GAR+ +S S PG +RI+ + G +D + +A L++ ++ E D A G++
Sbjct: 118 GARVTISES---IPGNPERILNVFGALDAVSKAFGLIVRRINDEPF--DVASVPGSRAVT 172
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++ I+PNS GS+IG+ G+ IK D S A + S + G +R+++++G D
Sbjct: 173 IKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEV--MLPGSTERILSVSGVADAIHI 230
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A+ I L E Y + P++ G + GM A + P
Sbjct: 231 AVYYIGTILLE---YQERNPGPHSGIGTYRQQPQGM----------AAAQPSFTGVAPGA 277
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS--- 300
GG ++ + I + + +G ++G+ G I EI S +I+V++ G
Sbjct: 278 GGASAPGSQTQQ-----IFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQ 332
Query: 301 --GTSERKVTISGPQRSIRTAESMIMQKV 327
ER VTI+G +I A M+ ++
Sbjct: 333 PVNPDERLVTITGQPVNINIAVQMLYHRL 361
>gi|444519891|gb|ELV12903.1| Poly(rC)-binding protein 3 [Tupaia chinensis]
Length = 300
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 43/287 (14%)
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
+SGARI +S + +RI+ I+G D I +A ++ K ++
Sbjct: 20 MHGKSGARINISEGN-----CPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPAT 74
Query: 120 TK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLT 175
+K LRL+VP S CGS+IGK G+ IK + + A ++++ L +S +R VT++
Sbjct: 75 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNS----TERAVTIS 130
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSGFHGMPYG-----AVPP 226
GT D ++ ++ I + + E + T+PY V F+G G Y A+P
Sbjct: 131 GTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPASTPVIFAG--GQAYTIQGQYAIPH 186
Query: 227 P----------VPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGG 276
P + P P G + T+ LTI ++ IG ++GR G
Sbjct: 187 PDQLTKLHQLAMQQTPFPPLGQTNPAFPG--LDASPPASTHELTI--PNDLIGCIIGRQG 242
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 243 TKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 286
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 65 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 122
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 123 TERAVTISGTPDAIIQCVKQICVVML 148
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 226 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 282
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 283 QYLINARLTSEV 294
>gi|238836390|gb|ACR61403.1| IGF-II mRNA-binding protein 2a variant D [Danio rerio]
Length = 388
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 31/313 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +++ + R G ++ I I T +
Sbjct: 46 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENA--GAAEKPITIHSTPEGCST 103
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E +D+ L+++ NS G +IGK G +K +D++ I
Sbjct: 104 ACHMIMDIMQKEAVDTKVTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTETKIT 159
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---Y 206
IS L D + Y +R + + G+++ RA I+ KL E + Q+ +P
Sbjct: 160 ISSLQDLTIYN-PERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPGLSL 218
Query: 207 TYAGVFFSGFHGMPYGAVP---PPVPAVPHNT--------AAHYG-PNMGGRKFQNNKDD 254
+ G+F +G +P A P PPVP +N YG P G Q+ +
Sbjct: 219 SALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGGLYGVPPASGISHQHTQAP 278
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
+ + + + +G ++G+ G++I ++++ +GA IK++ ++R V I+GP
Sbjct: 279 EQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PDVTQRMVIITGPPE 336
Query: 315 SIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 337 AQFKAQGRIFGKL 349
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 22 PVKSLSSDPTEKPT--YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P +S T+ P + + GA+IGK G I +GA I+++ + P
Sbjct: 266 PASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PD 323
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
T R+++I+G + +A + KL E + ++V +T ++ VP+S+ G +IGK
Sbjct: 324 VTQRMVIITGPPEAQFKAQGRIFGKLKEE-NFFTAKEEVKLETHIK--VPSSAAGRVIGK 380
Query: 140 AGATIK 145
G T++
Sbjct: 381 GGKTVR 386
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK G IK + A IKI+ + + R+V +TG + Q +A
Sbjct: 285 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESP--DVTQRMVIITGPPEAQFKAQ 342
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 343 GRIFGKLKEENFFT 356
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 31/313 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +++ + R G ++ I I T +
Sbjct: 46 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENA--GAAEKPITIHSTPEGCST 103
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E +D+ L+++ NS G +IGK G +K +D++ I
Sbjct: 104 ACHMIMDIMQKEAVDTKVTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTETKIT 159
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---Y 206
IS L D + Y +R + + G+++ RA I+ KL E + Q+ +P
Sbjct: 160 ISSLQDLTIYN-PERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPGLSL 218
Query: 207 TYAGVFFSGFHGMPYGAVP---PPVPAVPHNT--------AAHYG-PNMGGRKFQNNKDD 254
+ G+F +G +P A P PPVP +N YG P G Q+ +
Sbjct: 219 SALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGGLYGVPPASGISHQHTQAP 278
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
+ + + + +G ++G+ G++I ++++ +GA IK++ ++R V I+GP
Sbjct: 279 EQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PDVTQRMVIITGPPE 336
Query: 315 SIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 337 AQFKAQGRIFGKL 349
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 22 PVKSLSSDPTEKPTY--IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P +S T+ P + + GA+IGK G I +GA I+++ + P
Sbjct: 266 PASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PD 323
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T R+++I+G + +A + KL E A+++ K + + VP+S+ G +I
Sbjct: 324 VTQRMVIITGPPEAQFKAQGRIFGKLKEENFFTAKEE-----VKLETHIKVPSSAAGRVI 378
Query: 138 GKAGATIKSFMDDSQAVIKISR 159
GK G T+ + + A + + R
Sbjct: 379 GKGGKTVNELQNLTSAEVIVPR 400
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK G IK + A IKI+ + + R+V +TG + Q +A
Sbjct: 285 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESP--DVTQRMVIITGPPEAQFKAQ 342
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 343 GRIFGKLKEENFFT 356
>gi|90081810|dbj|BAE90186.1| unnamed protein product [Macaca fascicularis]
Length = 300
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 143/300 (47%), Gaps = 50/300 (16%)
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
+ +SGARI +S + +RI+ I+G D I +A ++ K ++
Sbjct: 1 MREESGARINISEGN-----CPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPAT 55
Query: 120 TK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLT 175
+K LRL+VP S CGS+IGK G+ IK + + A ++++ L +S +R VT++
Sbjct: 56 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNS----TERAVTIS 111
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSG---------------- 215
GT D ++ ++ I + + E + T+PY V F+G
Sbjct: 112 GTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPD 169
Query: 216 ---FHGMPYGAVP-PPV----PAVPHNT----AAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
H + P PP+ PA P ++ N+ G+ + ++ + +
Sbjct: 170 LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI 229
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG ++GR G I EI Q+SGA+IK+++ + G+SER++TI+G +I A+ +I
Sbjct: 230 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLI 286
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 46 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 103
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 104 TERAVTISGTPDAIIQCVKQICVVML 129
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 226 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 282
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 283 QYLINARLTSEV 294
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 145/313 (46%), Gaps = 31/313 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +++ + R G ++ I I T +
Sbjct: 200 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCST 257
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E +D+ L+++ NS G +IGK G +K +D++ I
Sbjct: 258 ACHMIMDIMQKEAVDTKVTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTETKIT 313
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---Y 206
IS L D + Y +R + + G+++ RA I+ KL E + Q+ +P
Sbjct: 314 ISSLQDLTIYN-PERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPGLSL 372
Query: 207 TYAGVFFSGFHGMPYGAVP---PPVPAVPHNTAAHYGPNMGGR---------KFQNNKDD 254
+ G+F +G +P A P PPVP +N + +GG Q+ +
Sbjct: 373 SALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGGLYGVPPASGISHQHTQAP 432
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
+ + + + +G ++G+ G++I ++++ +GA IK++ ++R V I+GP
Sbjct: 433 EQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PDVTQRMVIITGPPE 490
Query: 315 SIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 491 AQFKAQGRIFGKL 503
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 22 PVKSLSSDPTEKPT--YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P +S T+ P + + GA+IGK G I +GA I+++ + P
Sbjct: 420 PASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PD 477
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
T R+++I+G + +A + KL E + ++V +T ++ VP+S+ G +IGK
Sbjct: 478 VTQRMVIITGPPEAQFKAQGRIFGKLKEE-NFFTAKEEVKLETHIK--VPSSAAGRVIGK 534
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 535 GGKTVNELQNLTSAEVIVPR 554
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK G IK + A IKI+ + + R+V +TG + Q +A
Sbjct: 439 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESP--DVTQRMVIITGPPEAQFKAQ 496
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 497 GRIFGKLKEENFFT 510
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 145/313 (46%), Gaps = 31/313 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +++ + R G ++ I I T +
Sbjct: 200 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCST 257
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E +D+ L+++ NS G +IGK G +K +D++ I
Sbjct: 258 ACHMIMDIMQKEAVDTKVTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTETKIT 313
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---Y 206
IS L D + Y +R + + G+++ RA I+ KL E + Q+ +P
Sbjct: 314 ISSLQDLTIYN-PERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPGLSL 372
Query: 207 TYAGVFFSGFHGMPYGAVP---PPVPAVPHNTAAHYGPNMGGR---------KFQNNKDD 254
+ G+F +G +P A P PPVP +N + +GG Q+ +
Sbjct: 373 SALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGGLYGVPPASGISHQHTQAP 432
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
+ + + + +G ++G+ G++I ++++ +GA IK++ ++R V I+GP
Sbjct: 433 EQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PDVTQRMVIITGPPE 490
Query: 315 SIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 491 AQFKAQGRIFGKL 503
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 22 PVKSLSSDPTEKPT--YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P +S T+ P + + GA+IGK G I +GA I+++ + P
Sbjct: 420 PASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PD 477
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
T R+++I+G + +A + KL E + ++V +T ++ VP+S+ G +IGK
Sbjct: 478 VTQRMVIITGPPEAQFKAQGRIFGKLKEE-NFFTAKEEVKLETHIK--VPSSAAGRVIGK 534
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 535 GGKTVNELQNLTSAEVIVPR 554
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK G IK + A IKI+ + + R+V +TG + Q +A
Sbjct: 439 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESP--DVTQRMVIITGPPEAQFKAQ 496
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 497 GRIFGKLKEENFFT 510
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 147/307 (47%), Gaps = 34/307 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI S AR+ + R G+ ++ I I G +
Sbjct: 149 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNV--GSLEKAITIYGNPENCTN 206
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++D + E + ++ + L+++ N+ G IIGK G TIK M D+ + I
Sbjct: 207 ACKKILDVMQQEAASTNKGE-----ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKIT 261
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ GT++ +A +I KL + + Q+M P
Sbjct: 262 VSSINDINSFNL-ERIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHP 320
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIG 262
+ AG+ +S YG+ P P P Y ++ ++ D + + +
Sbjct: 321 MAMMSTAGMGYSSRGPGLYGSGPAPYP---------YQSSLPTQQGVPASDTQETTF-LY 370
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAE 320
+ + +G ++G G +I I + SGA +K++ ++ +ERKVTI G S A+
Sbjct: 371 IPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIIGSPESQWKAQ 430
Query: 321 SMIMQKV 327
+I +K+
Sbjct: 431 YLIFEKM 437
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 58/207 (28%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ L D +R VT+ G+ + Q +
Sbjct: 369 LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIIGSPESQWK 428
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ + T V T
Sbjct: 429 AQYLIFEKMREEGYVAGTEDVRLT------------------------------------ 452
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD-RGDFFSGT 302
+ I V +G ++G+GG+N+ E+ +++G+ IK+S+ + S
Sbjct: 453 ---------------IEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAE 497
Query: 303 SERKVTISGPQRSIRTAE----SMIMQ 325
E V I GP S+++A+ +M++Q
Sbjct: 498 EETTVHIIGPFFSVQSAQRRIRAMVLQ 524
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 8 YVPSPDVHGKRSTAPVKS-LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGA 66
Y P + +S+ P + + + T++ T++ + N GA+IG GS I + SGA
Sbjct: 339 YGSGPAPYPYQSSLPTQQGVPASDTQETTFL--YIPNNSVGAIIGTKGSHIRNIIRFSGA 396
Query: 67 RIQLSRSHEFFPG--TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKL 124
++++ + P T+R + I G+ + +A L+ +K+ E + D + +
Sbjct: 397 SVKIAPLEQDKPAEQQTERKVTIIGSPESQWKAQYLIFEKMREEGYVAGTED---VRLTI 453
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
++VP++ G IIGK G ++ + +VIK+S
Sbjct: 454 EILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLS 487
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+L I + IG ++G+GG I I Q + ++I VS D S ER +T+ G ++
Sbjct: 228 TLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDINSFNLERIITVKGTIENMS 287
Query: 318 TAESMIMQKV--AYASD 332
AESMI K+ +Y +D
Sbjct: 288 KAESMISSKLRQSYEND 304
>gi|426249910|ref|XP_004018689.1| PREDICTED: poly(rC)-binding protein 4 [Ovis aries]
Length = 425
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 27/281 (9%)
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE--D 113
T+ + QS ARI +S +RI I+G+ + AV ++ KL +L A +
Sbjct: 61 TVKRIREQSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN 115
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRL 171
+ LRL++P S CGS+IGKAG IK + + A ++++ L +S +R
Sbjct: 116 GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNS----TERA 171
Query: 172 VTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSGFHGMP----YGA 223
VT++G D + + I + E + T+PY + V S G YGA
Sbjct: 172 VTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGA 229
Query: 224 VPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEI 282
V P + H P + +T+S V ++ IG V+GR G I EI
Sbjct: 230 VTPAEVTKLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEI 289
Query: 283 SQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 290 RQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 327
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 123 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 180
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 181 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQ 240
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 241 LSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 299
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 300 --GNQAEGAGERHVTITGS 316
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 258 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 314
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 315 GSPVSIALAQYLITACLET 333
>gi|409045569|gb|EKM55049.1| hypothetical protein PHACADRAFT_95060 [Phanerochaete carnosa
HHB-10118-sp]
Length = 409
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 150/310 (48%), Gaps = 42/310 (13%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IGK G+ +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 111 HMRCLIVTQDASIIIGKAGTHVNEIREKSGARVMVS---ESIPGNPERILNVSGPLDAVS 167
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L++ ++ E D+ G++ ++ ++PNS GS+IGK GA IK D S A
Sbjct: 168 KAFGLIVRRINDEPF--DKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGAR 225
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRA---LELILLKLSEDTLYSQTMTVPYTYAGV 211
+ S + G +R+++++G D A + IL++ +E Q + +
Sbjct: 226 LNAS--EGMLPGSTERVLSVSGVADAIHIATYYIGNILIEANERMPSYQNSSYRPSSTSR 283
Query: 212 FFSGFHGMPYGAVPPPVPAVPHNTA---AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHI 268
+ + G Y VP + H +A H P G + Q + I + ++ +
Sbjct: 284 SRAPYQGSSY--VP-----IGHASALLQPHAPPP--GAQLQTQQ--------IYIPNDLV 326
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS-----------ERKVTISGPQRSIR 317
G ++G+GG I EI +S ++IK+ + G G + ER V I+G +I+
Sbjct: 327 GCIIGKGGSKINEIRHVSASQIKIMEPGAVGVGMNGQPAPAAAHEGERLVVITGAPNNIQ 386
Query: 318 TAESMIMQKV 327
A ++ ++
Sbjct: 387 IAVQLLYSRL 396
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 59/229 (25%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V+ ++ +P +KP+ I+F++ N G+VIGKGG+ I + Q SGAR L+ S
Sbjct: 174 VRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGAR--LNASEG 231
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL-------------------------- 109
PG+T+R++ +SG D I A I +L E
Sbjct: 232 MLPGSTERVLSVSGVADAIHIAT-YYIGNILIEANERMPSYQNSSYRPSSTSRSRAPYQG 290
Query: 110 -------HA----EDQADDVGTKTKLRLI-VPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
HA + A G + + + I +PN G IIGK G+ I S + IKI
Sbjct: 291 SSYVPIGHASALLQPHAPPPGAQLQTQQIYIPNDLVGCIIGKGGSKINEIRHVSASQIKI 350
Query: 158 SRLDHSYYGLN-----------DRLVTLTGTLDEQMRALELILLKLSED 195
G+N +RLV +TG + A++L+ +L ++
Sbjct: 351 MEPGAVGVGMNGQPAPAAAHEGERLVVITGAPNNIQIAVQLLYSRLEQE 399
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 54/211 (25%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+R ++ IIGKAG + + S A + +S S G +R++ ++G LD +
Sbjct: 112 MRCLIVTQDASIIIGKAGTHVNEIREKSGARVMVS---ESIPGNPERILNVSGPLDAVSK 168
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI+ +++++ P+ P+VP +
Sbjct: 169 AFGLIVRRINDE---------PFDK--------------------PSVPGS--------- 190
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
R ++ + + +G V+G+GG I EI SGAR+ S+ G++
Sbjct: 191 -----------RAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASE--GMLPGST 237
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
ER +++SG +I A I + A++R+
Sbjct: 238 ERVLSVSGVADAIHIATYYIGNILIEANERM 268
>gi|198425067|ref|XP_002127946.1| PREDICTED: similar to insulin-like growth factor 2 mRNA binding
protein 1 [Ciona intestinalis]
Length = 601
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 141/312 (45%), Gaps = 41/312 (13%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LV + GA+IGKGG +I ++ ARI + R PG T++ I I+GT + A
Sbjct: 197 RMLVPSQYVGAIIGKGGDSIRAITQKTHARIDVHRKDN--PGATEKAITINGTPEACGAA 254
Query: 98 VDLVIDKLLTELHAEDQA------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
V ++D + E QA DD+ L+++ NS G +IGK G +K+ +
Sbjct: 255 VGAILDIVRDEDRNARQAAGTWNDDDI----PLKILAHNSLIGRLIGKEGRNLKAIQEKV 310
Query: 152 QAVIKISRLDHSYYGLN-DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV----PY 206
+ I IS N +R + + G D A L++ KL + Y M + P+
Sbjct: 311 ETKIAISNSMADMQQCNAERTIAIYGDNDRCAEAEVLLMEKLR--SCYENDMMIAQQQPH 368
Query: 207 TYAGVFF---SGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQN---NKDDR---TN 257
Y G+ F S F G+ G H YG N G+ F+ N D R +
Sbjct: 369 QYPGINFNQLSMFGGLQGG--------YGHPGMREYGMNYQGQNFRGQGYNGDQRAQMSE 420
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV--SDRGDFFSGTSERKVTISGPQRS 315
+ T+ + E +G ++G G +I IS+I+ A IK+ + GD +R+VTI G
Sbjct: 421 TCTLYIPAESVGAMIGSKGSHIRNISRIANASIKIVPPEDGD---DEKQRRVTIMGSPEG 477
Query: 316 IRTAESMIMQKV 327
++ I K+
Sbjct: 478 QWKSQFCIFDKL 489
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 48/314 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV++ + GA+IG+ GSTI S AR+ + R G+ ++ I I G +
Sbjct: 129 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNV--GSLEKAITIYGNPENCTS 186
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 187 ACKRILEVMQQEANNTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 241
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVPYTYA 209
+S + D + + L +R++T+ G++D R I KL + L Q++ P +
Sbjct: 242 VSSINDINSFNL-ERIITVKGSIDNMSRGESQISAKLRQSYENDLQALAPQSIMFPGLHP 300
Query: 210 ---------GVFFSGFHGMPYGAV-----PPPVPAVPHNTAAHYGPNMGGRKFQNNKDDR 255
G+ F+G GM G PP VP P ++ D
Sbjct: 301 MAMMSTAGNGMGFTGRTGMYPGTSYPMYQPPTVPGAPPGSS-----------------DV 343
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQ 313
+ + + + +G ++G G +I I + SGA +K++ + +ERKVTI G
Sbjct: 344 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGTP 403
Query: 314 RSIRTAESMIMQKV 327
+ A+ +I +K+
Sbjct: 404 EAQWKAQYLIFEKM 417
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 53/200 (26%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I++ + S A +KI+ L D +R VT+ GT + Q +
Sbjct: 349 LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWK 408
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ S T
Sbjct: 409 AQYLIFEKMREEGFVSGT------------------------------------------ 426
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DD ++ I V +G ++G+GG+N+ E+ +++G+ IK+ +
Sbjct: 427 ---------DDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEHTTNTPVDE 477
Query: 304 ERKVTISGPQRSIRTAESMI 323
E V I GP S+++A+ I
Sbjct: 478 ETTVHIIGPFFSVQSAQRRI 497
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFF 77
T P S ++ TY+ + N GA+IG GS I + SGA ++++ + +
Sbjct: 332 TVPGAPPGSSDVQETTYL--YIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPL 389
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T+R + I GT + +A L+ +K+ E DDV + + ++VP++ G II
Sbjct: 390 EQQTERKVTIVGTPEAQWKAQYLIFEKMREEGFVSG-TDDV--RLTVEILVPSAQVGRII 446
Query: 138 GKAGATIKSFMDDSQAVIKI 157
GK G ++ + ++IK+
Sbjct: 447 GKGGQNVRELQRVTGSIIKL 466
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 81/211 (38%), Gaps = 57/211 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+V + G+IIG+ G+TI+ +S+A + + R D+ G ++ +T+ G +
Sbjct: 129 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDN--VGSLEKAITIYGNPENCTS 186
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + IL + ++
Sbjct: 187 ACKRILEVMQQEA----------------------------------------------- 199
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN + L I + IG ++G+ G I I Q + +I VS D S
Sbjct: 200 ------NNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL 253
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ ES I K+ +Y +D
Sbjct: 254 ERIITVKGSIDNMSRGESQISAKLRQSYEND 284
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 149/345 (43%), Gaps = 48/345 (13%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R P SS P + +R LV GA+IGK
Sbjct: 152 SYIPDDEVSSPQPPQRSRRGGHSSREQGPSPGGSSQPKQLDFPLRILVPTQFVGAIIGKE 211
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +++ + R G ++ I I T + A +++D + E
Sbjct: 212 GLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSEACRMILDIMQKEAEETK 269
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLV 172
A+++ L+++ NS G +IGK G +K D+ I IS L D + Y +R +
Sbjct: 270 SAEEI----PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYN-PERTI 324
Query: 173 TLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYG- 222
T+ G+++ A I+ KL E T+ Q +P G+F +G +P G
Sbjct: 325 TVKGSIEACSNAEAEIMNKLREAYENDIVTVNQQANLIPGLNLNALGIFSTGLSMLPSGT 384
Query: 223 AVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEI 282
V P + P+N A + + + + +G ++G+ G++I ++
Sbjct: 385 GVRRPAVSTPYNPFA---------------VPEQEVVNLFIPTQAVGAIIGKKGQHIKQL 429
Query: 283 SQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 430 ARFAGASIKIAPAES--PEASERMVIITGPPEAQFKAQGRIFGKL 472
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 62/214 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT---LDE 180
LR++VP G+IIGK G TIK+ +Q+ + I R +++ G ++ +T+ T E
Sbjct: 195 LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSE 252
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +E+T ++ +P AH
Sbjct: 253 ACRMILDIMQKEAEETKSAEE-----------------------------IPLKILAH-- 281
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
NSL +G ++G+ GRN+ +I Q +G +I +S D
Sbjct: 282 ----------------NSL--------VGRLIGKEGRNLKKIEQDTGTKITISPLQDLTI 317
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE+ IM K+ AY +D
Sbjct: 318 YNPERTITVKGSIEACSNAEAEIMNKLREAYEND 351
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 47/207 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + +G +I +S + +R I + G+I+
Sbjct: 276 LKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTITVKGSIEACSN 335
Query: 97 AVDLVIDKLLTELHAED------QADDV--------------------GTKTK------- 123
A +++KL E + D QA+ + GT +
Sbjct: 336 AEAEIMNKL-REAYENDIVTVNQQANLIPGLNLNALGIFSTGLSMLPSGTGVRRPAVSTP 394
Query: 124 -----------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ L +P + G+IIGK G IK + A IKI+ + ++R+V
Sbjct: 395 YNPFAVPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPEA--SERMV 452
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
+TG + Q +A I KL E+ ++
Sbjct: 453 IITGPPEAQFKAQGRIFGKLKEENFFN 479
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G I +GA I+++ + P ++R+++I+G + +
Sbjct: 406 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PEASERMVIITGPPEAQFK 463
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + K + + VP+S+ G +IGK G T+ + + A +
Sbjct: 464 AQGRIFGKLKEENFFNPKEE---VKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVI 520
Query: 157 ISR 159
+ R
Sbjct: 521 VPR 523
>gi|401412830|ref|XP_003885862.1| HnRNP-E2 protein, related [Neospora caninum Liverpool]
gi|325120282|emb|CBZ55836.1| HnRNP-E2 protein, related [Neospora caninum Liverpool]
Length = 417
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 34/205 (16%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
+ P Y++ +V+N AGA+IGK G I + Q+G ++LS + F+PGT DR++++SG
Sbjct: 15 QGPCYLKMIVNNVAAGAIIGKNGVAIAAMEQQTGCALKLSPLNAFYPGTQDRVLVMSGEQ 74
Query: 92 DEILRAVDLVIDKL----LTELHAEDQ--------------ADDVGT-----------KT 122
+++ A+ L++ K+ ++ A Q A+ VG K
Sbjct: 75 EQVNNALVLILGKIKETVTSQFGAGTQTGTQPGSNGAGNGSAECVGRDPFGSNDASQHKI 134
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
RL VP S+ +IIGK G I+ D + A +++S + GL +R++T+TG L EQ+
Sbjct: 135 TCRLAVPRSAVSTIIGKGGQQIRELQDTTGARVQVSCREE---GLAERMITITGLL-EQV 190
Query: 183 RALEL-ILLKLSEDTLYSQTMTVPY 206
RA L I + D M V Y
Sbjct: 191 RAAALGIASCIQSDPYLRDHMHVVY 215
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 26/198 (13%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++IV N + G+IIGK G I + + +K+S L+ Y G DR++ ++G ++
Sbjct: 20 LKMIVNNVAAGAIIGKNGVAIAAMEQQTGCALKLSPLNAFYPGTQDRVLVMSGEQEQVNN 79
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
AL LIL K+ E T+ SQ F +G G P N A +
Sbjct: 80 ALVLILGKIKE-TVTSQ-----------FGAGTQ---TGTQPGS------NGAGNGSAEC 118
Query: 244 GGRKFQNNKDDRTNSLT--IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
GR + D + +T + V + ++G+GG+ I E+ +GAR++VS R + G
Sbjct: 119 VGRDPFGSNDASQHKITCRLAVPRSAVSTIIGKGGQQIRELQDTTGARVQVSCREE---G 175
Query: 302 TSERKVTISGPQRSIRTA 319
+ER +TI+G +R A
Sbjct: 176 LAERMITITGLLEQVRAA 193
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 48/74 (64%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+++ V D+ IG V+GR G + E+ +GARI++S +GD GT++RK+ +SG ++ +
Sbjct: 280 ISLQVPDQSIGAVIGRNGACVTEVINATGARIQISQKGDLVPGTNDRKIVLSGTVGAVHS 339
Query: 319 AESMIMQKVAYASD 332
A +++Q++ D
Sbjct: 340 AHLLLLQRIHAVQD 353
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I V + GAVIG+ G+ + + + +GARIQ+S+ + PGT DR I++SGT+ +
Sbjct: 280 ISLQVPDQSIGAVIGRNGACVTEVINATGARIQISQKGDLVPGTNDRKIVLSGTVGAVHS 339
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK 121
A L LL +HA D VG K
Sbjct: 340 AHLL----LLQRIHAVQ--DGVGGK 358
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+D ++ R V +IGKGG I + Q +GAR+Q+S E G +R+I
Sbjct: 126 SNDASQHKITCRLAVPRSAVSTIIGKGGQQIRELQDTTGARVQVSCREE---GLAERMIT 182
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G ++++ RA L I +
Sbjct: 183 ITGLLEQV-RAAALGIASCI 201
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D + + ++ L VP+ S G++IG+ GA + ++ + A I+IS+ G NDR + L+
Sbjct: 272 DALSLQCEISLQVPDQSIGAVIGRNGACVTEVINATGARIQISQKGDLVPGTNDRKIVLS 331
Query: 176 GTLDEQMRALELILLKL 192
GT+ A L+L ++
Sbjct: 332 GTVGAVHSAHLLLLQRI 348
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+ G I + Q +G +K+S F+ GT +R + +SG Q + A +I+ K+
Sbjct: 30 GAIIGKNGVAIAAMEQQTGCALKLSPLNAFYPGTQDRVLVMSGEQEQVNNALVLILGKI 88
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 144/314 (45%), Gaps = 48/314 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV++ + GA+IG+ GSTI S AR+ + R G+ ++ I I G +
Sbjct: 128 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNV--GSLEKAITIYGNPENCTS 185
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 186 ACKRILEVMQQEANNTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 240
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVPYTYA 209
+S + D + + L +R++T+ G++D R I KL + L Q++ P +
Sbjct: 241 VSSINDINSFNL-ERIITVKGSIDNMSRGESQISAKLRQSYENDLQALAPQSIMFPGLHP 299
Query: 210 ---------GVFFSGFHGMPYGAV-----PPPVPAVPHNTAAHYGPNMGGRKFQNNKDDR 255
G+ F+G GM G+ PP P VP ++ D
Sbjct: 300 MAMMSTAGNGMGFAGRSGMYPGSSYPMYQPPTAPGVPPGSS-----------------DV 342
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQ 313
+ + + + +G ++G G +I I + SGA +K++ + +ERKVTI G
Sbjct: 343 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGTP 402
Query: 314 RSIRTAESMIMQKV 327
+ A+ +I +K+
Sbjct: 403 EAQWKAQYLIFEKM 416
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 53/196 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I++ + S A +KI+ L D +R VT+ GT + Q +
Sbjct: 348 LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWK 407
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ S T
Sbjct: 408 AQYLIFEKMREEGFVSGT------------------------------------------ 425
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DD ++ I V +G ++G+GG+N+ E+ +++G+ IK+ +
Sbjct: 426 ---------DDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEHTAATPVDE 476
Query: 304 ERKVTISGPQRSIRTA 319
E V I GP S++ +
Sbjct: 477 ETTVHIIGPFFSVQVS 492
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFF 77
TAP S ++ TY+ + N GA+IG GS I + SGA ++++ + +
Sbjct: 331 TAPGVPPGSSDVQETTYL--YIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPL 388
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T+R + I GT + +A L+ +K+ E DDV + + ++VP++ G II
Sbjct: 389 EQQTERKVTIVGTPEAQWKAQYLIFEKMREEGFVSG-TDDV--RLTVEILVPSAQVGRII 445
Query: 138 GKAGATIKSFMDDSQAVIKI 157
GK G ++ + ++IK+
Sbjct: 446 GKGGQNVRELQRVTGSIIKL 465
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 81/211 (38%), Gaps = 57/211 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+V + G+IIG+ G+TI+ +S+A + + R D+ G ++ +T+ G +
Sbjct: 128 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDN--VGSLEKAITIYGNPENCTS 185
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + IL + ++
Sbjct: 186 ACKRILEVMQQEA----------------------------------------------- 198
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN + L I + IG ++G+ G I I Q + +I VS D S
Sbjct: 199 ------NNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL 252
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ ES I K+ +Y +D
Sbjct: 253 ERIITVKGSIDNMSRGESQISAKLRQSYEND 283
>gi|149236405|ref|XP_001524080.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452456|gb|EDK46712.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 399
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 141/310 (45%), Gaps = 66/310 (21%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG+ G I+ ++++ + +SR PGT +RI+ +SG +D+ +A
Sbjct: 127 RVLVSAKEAGCLIGQNGGVIDSIRNETNTKAGISR---LTPGTHERILTVSGKLDDSAKA 183
Query: 98 VDLVIDKL------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ L L +L + + G T +RL++PNS G++IG GA I+
Sbjct: 184 LSYFAQALCDSAIELYNYFPLKQLSSTPCVE--GETTIIRLLIPNSQMGTLIGSKGARIQ 241
Query: 146 SFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
Q +S + + G N+RLV L GT+D+ +L +I L ED
Sbjct: 242 QI----QQSFGVSMIASKLFLPGSNERLVELQGTVDDLYDSLRVISRCLIED-------- 289
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
FS G T +Y P ++++ R ++ TI
Sbjct: 290 ---------FSSSVG----------------TTTYYVP-------RSHQMTRKSTATINF 317
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ +G ++G+ G I + ++SGA I +S+ D G+ ER TI+G Q+++ A+ ++
Sbjct: 318 PNDMVGALIGKNGSRIQGVRKVSGAMIGISEAED---GSDERVFTITGTQQAVEKAKGLL 374
Query: 324 MQKVAYASDR 333
+ R
Sbjct: 375 YHNLEREEQR 384
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 25/189 (13%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LSS P + T IR L+ N G +IG G+ I Q G + + S F PG
Sbjct: 203 PLKQLSSTPCVEGETTIIRLLIPNSQMGTLIGSKGARIQQIQQSFG--VSMIASKLFLPG 260
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------KTKLRL 126
+ +R++ + GT+D++ ++ ++ L+ ED + VGT K+ +
Sbjct: 261 SNERLVELQGTVDDLYDSLRVISRCLI-----EDFSSSVGTTTYYVPRSHQMTRKSTATI 315
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
PN G++IGK G+ I+ S A+I IS + G ++R+ T+TGT +A
Sbjct: 316 NFPNDMVGALIGKNGSRIQGVRKVSGAMIGISEAED---GSDERVFTITGTQQAVEKAKG 372
Query: 187 LILLKLSED 195
L+ L +
Sbjct: 373 LLYHNLERE 381
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 43 NPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVI 102
N + GA+IGK GS I + SGA I +S + + G+ +R+ I+GT + +A L+
Sbjct: 319 NDMVGALIGKNGSRIQGVRKVSGAMIGISEAED---GSDERVFTITGTQQAVEKAKGLLY 375
Query: 103 DKLLTELHAEDQADDVG 119
L E +A G
Sbjct: 376 HNLEREEQRRAEATSAG 392
>gi|354542956|emb|CCE39674.1| hypothetical protein CPAR2_600900 [Candida parapsilosis]
Length = 375
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 138/310 (44%), Gaps = 66/310 (21%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG+ G I+ + ++ + +SR GT +RI+ +SG +D+ +A
Sbjct: 112 RVLVSAKEAGCLIGQNGKVIDSIREETNTKAGISR---LIAGTHERILTVSGKLDDCAKA 168
Query: 98 VDLVIDKLL------------TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ LL +L + + T LRL++PNS G++IG GA I+
Sbjct: 169 LSYFAQALLGSSIETYNYFPLKQLSSTPCVEH--ETTILRLLIPNSQMGTLIGAKGARIQ 226
Query: 146 SFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
Q IS + + G N+RLV L GT+D+ AL +I L ED
Sbjct: 227 QI----QHNFGISMIASKSFLPGSNERLVELQGTVDDLYDALRIISRCLIED-------- 274
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
FS G T +Y P ++++ R ++ TI
Sbjct: 275 ---------FSSSVG----------------TTTYYVP-------KSHQSTRKSTATISF 302
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ +G ++G+ G I + ++SGA I + G+ G+ ER TI+G Q+++ A+S++
Sbjct: 303 PNDMVGALIGKNGSRIQGVRKVSGAMIGI---GEAVEGSDERVFTITGTQQAVEKAKSLL 359
Query: 324 MQKVAYASDR 333
+ R
Sbjct: 360 YHNLEREEQR 369
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 25/189 (13%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LSS P + T +R L+ N G +IG G+ I Q G I + S F PG
Sbjct: 188 PLKQLSSTPCVEHETTILRLLIPNSQMGTLIGAKGARIQQIQHNFG--ISMIASKSFLPG 245
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------KTKLRL 126
+ +R++ + GT+D++ A+ ++ L+ ED + VGT K+ +
Sbjct: 246 SNERLVELQGTVDDLYDALRIISRCLI-----EDFSSSVGTTTYYVPKSHQSTRKSTATI 300
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
PN G++IGK G+ I+ S A+I I + G ++R+ T+TGT +A
Sbjct: 301 SFPNDMVGALIGKNGSRIQGVRKVSGAMIGIGE---AVEGSDERVFTITGTQQAVEKAKS 357
Query: 187 LILLKLSED 195
L+ L +
Sbjct: 358 LLYHNLERE 366
>gi|402225510|gb|EJU05571.1| hypothetical protein DACRYDRAFT_20011 [Dacryopinax sp. DJM-731 SS1]
Length = 413
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 148/316 (46%), Gaps = 30/316 (9%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
+P + ++R L+ A +IGKGGS +N+ + +SGARI +S E PG +RI+ ++
Sbjct: 116 EPPPQNIHMRALIVTQDASIIIGKGGSHVNEIREKSGARITVS---ESIPGNPERILNVT 172
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSF 147
G +D + +A L++ ++ E +Q G++ ++ I+PNS G++IGKAG+ IK
Sbjct: 173 GPLDAVAKAFGLIVRQINDEPF--EQPSVPGSRAVTIKFIIPNSRMGTLIGKAGSKIKEI 230
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
+ S A K+ + G +R++ ++G D A+ + + L S + T
Sbjct: 231 QEASGA--KLHASEGLLPGSTERVLNVSGVAD----AIHIATYYVGNSLLNSHP-SYSST 283
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
+A + M PP V + Q ++ + ++
Sbjct: 284 HAS-YKQQRRPMASTTYYPPNTPVSNYGYPGPAAAPAPVSLQQTQN-------FYIPNDL 335
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS---------ERKVTISGPQRSIRT 318
+G ++G+GG I EI +SG +IK+ + G + S ER VTI+G +I+
Sbjct: 336 VGSIIGKGGAKINEIRHVSGCQIKILEPGQGPAPGSGAVQPMSETERMVTITGGIANIQM 395
Query: 319 AESMIMQKVAYASDRL 334
A ++ ++ RL
Sbjct: 396 AVQLLASRIEQEKQRL 411
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 90/224 (40%), Gaps = 53/224 (23%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V+ ++ +P E+P+ I+F++ N G +IGK GS I + Q SGA++ S
Sbjct: 186 VRQINDEPFEQPSVPGSRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEG-- 243
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLL------TELHAEDQAD------------- 116
PG+T+R++ +SG D I A V + LL + HA +
Sbjct: 244 LLPGSTERVLNVSGVADAIHIATYYVGNSLLNSHPSYSSTHASYKQQRRPMASTTYYPPN 303
Query: 117 ----------------DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL 160
V + +PN GSIIGK GA I S IKI
Sbjct: 304 TPVSNYGYPGPAAAPAPVSLQQTQNFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEP 363
Query: 161 DH---------SYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+R+VT+TG + A++L+ ++ ++
Sbjct: 364 GQGPAPGSGAVQPMSETERMVTITGGIANIQMAVQLLASRIEQE 407
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 141/310 (45%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 184
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AED + + L+++ N G +IGK G +K ++ I
Sbjct: 185 ACRMILEIMQKE--AED--TKLAEEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 240
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT+D A I+ KL E + Q +P
Sbjct: 241 ISSLQDLSIYN-PERTITVKGTIDACANAEMEIMKKLREAFENDMLAVNQQANLIPGLNL 299
Query: 207 TYAGVFFSGFHGMPYGA----VPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD-----RTN 257
+ G+F +G +P A VPP VP P + + Y PNM
Sbjct: 300 SALGIFSTGLSVLPPPAGPRGVPPSVPYHPFASHSGYFPNMYPHHHFGPFPHHHSYPEQE 359
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
++ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 360 TVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 417
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 418 KAQGRIFGKL 427
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 184
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +EDT ++ VP AH G
Sbjct: 185 ACRMILEIMQKEAEDTKLAE-----------------------------EVPLKILAHNG 215
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 216 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 249
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 250 YNPERTITVKGTIDACANAEMEIMKKLREAFENDML 285
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 361 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 418
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 419 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 475
Query: 157 ISR 159
+ R
Sbjct: 476 VPR 478
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 361 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 418
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 419 AQGRIFGKLKEENFFN 434
>gi|299115635|emb|CBN75836.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 296
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 111/194 (57%), Gaps = 16/194 (8%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
+SL+ DP + I+FLV N AG++IGK G+TI D Q ++ + ++ S ++PGT +R
Sbjct: 77 ESLAQDPD---SAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVGIATSGMYYPGTMER 133
Query: 84 IIMISGTIDEILRAVDLVIDKL---------LTELHAEDQADDVGTKTKLRLIVPNSSCG 134
++++G + + +A L++ L +L ++++A+ + + RL++P ++ G
Sbjct: 134 AVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSQEKAEAI--EVTQRLLIPLTAGG 191
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+IG+ GA I + + S A K++ + +++RLVT+ G L +A+E+++ KL E
Sbjct: 192 LVIGRRGANIAALLAASGA--KVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVE 249
Query: 195 DTLYSQTMTVPYTY 208
+ + S+ + Y
Sbjct: 250 EPVLSRFANLSVNY 263
>gi|392573629|gb|EIW66768.1| hypothetical protein TREMEDRAFT_65168 [Tremella mesenterica DSM
1558]
Length = 350
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 160/352 (45%), Gaps = 55/352 (15%)
Query: 21 APVKSLSSDPT----EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
+P + +SS P E +R LVS AG +IGKGG TI D ++++ + +S+
Sbjct: 7 SPTQEVSSSPNGHSDEPQLSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSK---V 63
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA---DDVGTKTKLRLIVPNSSC 133
PG DR+ +SG +D + A V +LL E D + VG T +RL++ ++
Sbjct: 64 VPGVQDRVFSVSGAVDHVAAAFAEVA-RLLLETPLSDSSLPPPPVGAFTSVRLLISHNLM 122
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
G++IG++GA IK D+S A + S+ L S +R+V + G+++ A+ I
Sbjct: 123 GTVIGRSGAKIKQIQDESGARMVASKEMLPQS----TERVVEIQGSVEAIKTAVLEIGKC 178
Query: 192 LSEDTLYSQTMTVPYTY-----AGVFF---------SGFHGMPYGAVPP----------- 226
L ED T TV Y AGV G G+ +V P
Sbjct: 179 LMED-WERNTGTVLYHPGAAGDAGVLAGGLGAQTVTGGLGGIRRSSVAPSFGFGGERRMS 237
Query: 227 --PVPAVPHNT-AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
P + P T P M N+ + RT +++I + +G ++GRGG I EI
Sbjct: 238 GRPSISAPSETRRVSDAPPM-----VNDPNLRTQNISI--PSDMVGCIIGRGGTKITEIR 290
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLM 335
++SG+RI ++ T ER TI G + A ++ ++ +R M
Sbjct: 291 RLSGSRISIAK--APHDETGERMFTIVGTADATERALMLLYSQLESEKERRM 340
>gi|9931476|gb|AAG02185.1| RNA binding protein MCG10 [Homo sapiens]
gi|119585575|gb|EAW65171.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585578|gb|EAW65174.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585579|gb|EAW65175.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
Length = 369
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 128/274 (46%), Gaps = 27/274 (9%)
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE--DQADDVGT 120
QS ARI +S +RI I+G+ + AV ++ KL +L A + +
Sbjct: 12 QSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRP 66
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTGTL 178
LRL++P S CGS+IGKAG IK + + A ++++ L +S +R VT++G
Sbjct: 67 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNS----TERAVTVSGVP 122
Query: 179 DEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSGFHGMP----YGAVPPPVPA 230
D + + I + E + T+PY + V S G YGAV P
Sbjct: 123 DAIILCVRQICAVILESP--PKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 180
Query: 231 VPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
++H P + +T+S V ++ IG V+GR G I EI Q+SGA
Sbjct: 181 KLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 240
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 241 IKIGNQAE---GAGERHVTITGSPVSIALAQYLI 271
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 60/202 (29%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG
Sbjct: 64 SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGV 121
Query: 91 IDEILRAVDLVIDKLL------------------TELHAEDQADDV-------------- 118
D I+ V + +L T L + +Q V
Sbjct: 122 PDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTK 181
Query: 119 ----------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
GT+T + +VPN G +IG+ G+ I S A I
Sbjct: 182 LQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 241
Query: 156 KISRLDHSYYGLNDRLVTLTGT 177
KI + G +R VT+TG+
Sbjct: 242 KI---GNQAEGAGERHVTITGS 260
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 202 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 258
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 259 GSPVSIALAQYLITACLET 277
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 202
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 203 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 257
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 258 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 313
Query: 216 FHGMPYGAVPP---------PVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
H M + P P P+ + ++ F N+ + T + + +
Sbjct: 314 LHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPAFPNDMQETT---YLYIPNN 370
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+G ++G G +I I + S A +K++ D +ERKVTI G A+ MI
Sbjct: 371 AVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIF 430
Query: 325 QKV 327
+K+
Sbjct: 431 EKM 433
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 365 LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 424
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ GF M
Sbjct: 425 AQYMIFEKMREE-------------------GF--------------------------M 439
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
G DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 440 CG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 493
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I GP S+++A+ I
Sbjct: 494 DEETPVHIIGPFYSVQSAQRRI 515
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 360 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVG 417
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 418 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 474
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 475 VTGSVIKL 482
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 29/318 (9%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP L + +R LV + + GA+IG+ GSTI Q+ AR+ + R G+
Sbjct: 274 APFGGLPGQSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNV--GS 331
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I I G + A +++ + E + ++ + L+++ N+ G IIGK
Sbjct: 332 LEKAITIYGNPENCTNACKRILEVMQQEANNTNKGEIC-----LKILAHNNLIGRIIGKG 386
Query: 141 GATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
G TIK M ++ I +S + D + + L +R++T+ G +D RA I KL +
Sbjct: 387 GNTIKRIMQETDTKITVSSINDINSFNL-ERIITVKGAIDNMSRAEAQISAKLRQSYEND 445
Query: 200 QTMTVPYTYAGVFFSGFH--------GMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNN 251
P T + F G H G+ YG+ P+ G GG
Sbjct: 446 LQAMAPQT---MMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQGG------ 496
Query: 252 KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTI 309
D + + + + +G ++G G +I I + SGA +K++ D +ER+VTI
Sbjct: 497 -GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTI 555
Query: 310 SGPQRSIRTAESMIMQKV 327
G + A+ +I +K+
Sbjct: 556 VGSPEAQWKAQYLIFEKM 573
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 58/208 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS--YYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I++ + S A +KI+ +D + N+R VT+ G+ + Q +
Sbjct: 505 LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWK 564
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ F +G
Sbjct: 565 AQYLIFEKMREEG---------------FVAG---------------------------- 581
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DD ++ I V +G ++G+GG+N+ E+ +++G+ IK+ ++G
Sbjct: 582 --------SDDVRLTVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQGA-SPQED 632
Query: 304 ERKVTISGPQRSIRTAE----SMIMQKV 327
E V I GP S+++A+ +M++Q V
Sbjct: 633 ETTVHIIGPFFSVQSAQRRIRAMVLQSV 660
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT--DRIIMIS 88
+++ TY+ + N GA+IG GS I + SGA ++++ E P T +R + I
Sbjct: 499 SQETTYL--YIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIV 556
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G+ + +A L+ +K+ E +DDV + + ++VP+S G IIGK G ++
Sbjct: 557 GSPEAQWKAQYLIFEKMREEGFVAG-SDDV--RLTVEIMVPSSQVGRIIGKGGQNVRELQ 613
Query: 149 DDSQAVIKI 157
+ +VIK+
Sbjct: 614 RVTGSVIKL 622
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 82/211 (38%), Gaps = 57/211 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++V + G+IIG+ G+TI+ ++A + + R D+ G ++ +T+ G +
Sbjct: 290 LRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDN--VGSLEKAITIYGNPENCTN 347
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + IL + ++
Sbjct: 348 ACKRILEVMQQEA----------------------------------------------- 360
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN + L I + IG ++G+GG I I Q + +I VS D S
Sbjct: 361 ------NNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNL 414
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ AE+ I K+ +Y +D
Sbjct: 415 ERIITVKGAIDNMSRAEAQISAKLRQSYEND 445
>gi|171687621|ref|XP_001908751.1| hypothetical protein [Podospora anserina S mat+]
gi|170943772|emb|CAP69424.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 158/374 (42%), Gaps = 84/374 (22%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG ++ + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 136 HIRAVISSPEAATIIGKGGENVSKIRQSSGAKCTVS---DYQKGAVERILTVSGVVDAAA 192
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E +E T LRL++P+ GSIIGK G+ IK + S A +
Sbjct: 193 KAFGLIIRTLNNEPLSEPSNQHSKT-YPLRLLIPHVLIGSIIGKGGSRIKEIQEASGARL 251
Query: 156 KISRLDHSYYGLNDRLVTLTG--------------TLDEQMR------ALELILLKLSED 195
S D ++R + +TG TL EQ+ A +
Sbjct: 252 NAS--DSCLPASSERSLVVTGVADAVHIATYYVGSTLLEQLNERFGGAAASAYATRSGGP 309
Query: 196 TLYSQTMTV-PYTY--AGVFFSG------------FHGMP---------YGAVPP---PV 228
+ MTV PY AG F H MP YGA P P
Sbjct: 310 AAVTGGMTVVPYVPQPAGGNFGQRDHYNNRRPDPRAHHMPPQAYGGAPQYGAYPQAAHPG 369
Query: 229 PAVPHN----------------------TAAHYGPNMG----GRKFQNNKDDRTNSLT-- 260
PAVP + A H GP G + + +T
Sbjct: 370 PAVPMHFAGAQAAGGYGPAAPHMPPHAGHAGHVGPQPHTGPHGPQAAGSGGAAGGPMTQQ 429
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I + ++ +G ++G+GG+ I EI QISG+ IK+++ D ++ER VTI+G + A
Sbjct: 430 IYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTDECNKMAL 486
Query: 321 SMIMQKVAYASDRL 334
M+ ++ R+
Sbjct: 487 YMLYTRLENEKHRM 500
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGGS I + Q SGAR+ S S
Sbjct: 199 IRTLNNEPLSEPSNQHSKTYPLRLLIPHVLIGSIIGKGGSRIKEIQEASGARLNASDS-- 256
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +++R ++++G D + A V LL +L+
Sbjct: 257 CLPASSERSLVVTGVADAVHIATYYVGSTLLEQLN 291
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 425 PMTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTDEC 481
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L E H
Sbjct: 482 NKMALYMLYTRLENEKH 498
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 141/307 (45%), Gaps = 34/307 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G+ ++ I I G +
Sbjct: 123 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNV--GSLEKAITIYGNPENCTN 180
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK G TIK M D+ I
Sbjct: 181 ACKKILEVMQQEANNTNKGE-----ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKIT 235
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ G++D +A +I KL + + Q+M P
Sbjct: 236 VSSINDINSFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHP 294
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIG 262
+ AG+ +S YG+ P P P P D + +
Sbjct: 295 MAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQGVP----------ASDTQETTFLY 344
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAE 320
+ + +G ++G G +I I + SGA +K++ ++ +ERKVTI G S A+
Sbjct: 345 IPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQ 404
Query: 321 SMIMQKV 327
+I +K+
Sbjct: 405 YLIFEKM 411
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 133/347 (38%), Gaps = 109/347 (31%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGKGG+TI + +I +S ++ +RII + G+ID + +
Sbjct: 203 LKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGSIDNMSK 262
Query: 97 AVDLVIDK-----------------LLTELHAEDQADDVG-------------------- 119
A ++ K + LH G
Sbjct: 263 AESMISSKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPY 322
Query: 120 --------------TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHS 163
T+ L +PN+S G+IIG G+ I++ + S A +KI+ L D
Sbjct: 323 QSSLPTQQGVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKP 382
Query: 164 YYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGA 223
+R VT+ G+ + Q +A LI K+ E+ + T V T
Sbjct: 383 AEQQTERKVTIVGSPESQWKAQYLIFEKMREEGYVAGTEDVRLT---------------- 426
Query: 224 VPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+ I V +G ++G+GG+N+ E+
Sbjct: 427 -----------------------------------IEILVPSTQVGRIIGKGGQNVRELQ 451
Query: 284 QISGARIKVSD-RGDFFSGTSERKVTISGPQRSIRTAE----SMIMQ 325
+++G+ IK+S+ + S E V I GP S+++A+ +M++Q
Sbjct: 452 RVTGSVIKLSEQQATPPSAEEETTVHIIGPFFSVQSAQRRIRAMVLQ 498
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 8 YVPSPDVHGKRSTAPVKS-LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGA 66
Y P + +S+ P + + + T++ T++ + N GA+IG GS I + SGA
Sbjct: 313 YGSGPAPYPYQSSLPTQQGVPASDTQETTFL--YIPNNSVGAIIGTKGSHIRNIIRFSGA 370
Query: 67 RIQLSRSHEFFPG--TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKL 124
++++ + P T+R + I G+ + +A L+ +K+ E + D + +
Sbjct: 371 SVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLIFEKMREEGYVAGTED---VRLTI 427
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
++VP++ G IIGK G ++ + +VIK+S
Sbjct: 428 EILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLS 461
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 57/211 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++V + G+IIG+ G+TI+ ++A + + R D+ G ++ +T+ G +
Sbjct: 123 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDN--VGSLEKAITIYGNPENCTN 180
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + IL + ++
Sbjct: 181 ACKKILEVMQQEA----------------------------------------------- 193
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN + +L I + IG ++G+GG I I Q + +I VS D S
Sbjct: 194 ------NNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNL 247
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ AESMI K+ +Y +D
Sbjct: 248 ERIITVKGSIDNMSKAESMISSKLRQSYEND 278
>gi|395526246|ref|XP_003765279.1| PREDICTED: RNA-binding protein Nova-2 [Sarcophilus harrisii]
Length = 233
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 114/239 (47%), Gaps = 35/239 (14%)
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
R V L +++L E++ + + + + L++++P+ + GSIIGK G TI ++ A I
Sbjct: 12 RPVGLCENQVLVEIYEKKREEG---EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 68
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
K+S+ Y G +R+ + GT + I K+ E
Sbjct: 69 KLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVRE--------------------- 107
Query: 216 FHGMPYGAVPPPVPAV--PHNTAAHYGPNMGGRKFQNNK---DDRTNSLTIGVADEHIGF 270
+P P V ++ P T P+ + K + + I V + +G
Sbjct: 108 ---IPQAMAKPEVASILQPQTT---MNPDRAKQFLAAEKLAAESAKELVEIAVPENLVGA 161
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAY 329
++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+ +I Q+V Y
Sbjct: 162 ILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTY 220
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 30/170 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 36 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 94
Query: 96 RAVDLVIDKLLTE----------------------------LHAEDQADDVGTKTKLRLI 127
AV I + + E L AE A + K + +
Sbjct: 95 NAVHSFIAEKVREIPQAMAKPEVASILQPQTTMNPDRAKQFLAAEKLAAE-SAKELVEIA 153
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TG+
Sbjct: 154 VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 203
>gi|403417714|emb|CCM04414.1| predicted protein [Fibroporia radiculosa]
Length = 420
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 152/328 (46%), Gaps = 38/328 (11%)
Query: 16 GKRSTAPVKSLSSDPTEKPT---YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
G +T+ S SS P ++R L+ A +IGKGGS +N+ + +S AR+ +S
Sbjct: 98 GSATTSAAPSTSSATGAAPAANIHMRCLIVTQDASIIIGKGGSHVNEIREKSSARVMVS- 156
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNS 131
E PG +RI+ +SG +D + +A L++ ++ E D+ G++ ++ ++PNS
Sbjct: 157 --ESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPF--DKPSVPGSRAVTIKFMIPNS 212
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
GS+IGK GA IK D S A + S + G +R+++++G D A+ +
Sbjct: 213 RMGSVIGKGGAKIKEIQDASGARLNAS--EGMLPGSTERVLSVSGVAD----AIHIATYY 266
Query: 192 LSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPA--VPHNTAAHYGPNMGGRKFQ 249
+ + + Y + + + PPP + VP + + G + G
Sbjct: 267 IGNILIEANERLPSYNNSSYYRPSSNSR----RPPPNGSSYVPGYSNTYPGSSHG----- 317
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF----------F 299
+ + I + ++ +G ++G+GG I EI +S + IK+ + G
Sbjct: 318 --PPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKIMEPGAVGVGMNGAPAPA 375
Query: 300 SGTSERKVTISGPQRSIRTAESMIMQKV 327
G ER V I+G +I+ A ++ ++
Sbjct: 376 GGEGERLVVITGQPANIQMAVQLLYHRL 403
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 54/211 (25%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+R ++ IIGK G+ + + S A + +S S G +R++ ++G LD +
Sbjct: 122 MRCLIVTQDASIIIGKGGSHVNEIREKSSARVMVSE---SIPGNPERILNVSGPLDAVSK 178
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI+ +++++ P+ P+VP
Sbjct: 179 AFGLIVRRINDE---------PFDK--------------------PSVP----------- 198
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
R ++ + + +G V+G+GG I EI SGAR+ S+ G++
Sbjct: 199 ---------GSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASE--GMLPGST 247
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
ER +++SG +I A I + A++RL
Sbjct: 248 ERVLSVSGVADAIHIATYYIGNILIEANERL 278
>gi|427785521|gb|JAA58212.1| Putative igf-ii mrna-binding protein imp [Rhipicephalus pulchellus]
Length = 657
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 41/322 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ G TI QS AR+ + R G+ +++I I G +
Sbjct: 208 LRILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKEN--AGSLEKVITIYGNPENCST 265
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E ++ D L+++ N+ G IIGK+G TIK M+ + I
Sbjct: 266 ACQKILEVMQQEASNTNRGD-----VPLKILAHNNLIGRIIGKSGNTIKRIMEQTDTKIT 320
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S L D S L +R++T+ G + RA +L+ KL + P + + F G
Sbjct: 321 VSSLHDGSALHL-ERVITIKGKPEGVCRAEQLVSAKLRQSYESDLAALAPQS---LMFPG 376
Query: 216 FHGMPYGAVPPPVPAVP---------------------------HNTAAHYGPNMGGRKF 248
H M + PP P + A +GP MGG
Sbjct: 377 LHPMAMMSAYPPPPPPHGPPARPPHYRGGGGGGPYPHPPAVGGGYMGGAVHGP-MGGYMS 435
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD-RGDFFSGTSERKV 307
++ + + + + +G ++G GG +I ++ +SGA IKV+ D + ERKV
Sbjct: 436 PSHGGVERELVCLYIPNTAVGAIIGTGGSSIRDMIMLSGASIKVAQPNKDDPADAHERKV 495
Query: 308 TISGPQRSIRTAESMIMQKVAY 329
TI G A+SMI KV Y
Sbjct: 496 TIVGTPECQWRAQSMIFNKVCY 517
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGTIDEIL 95
+ + N GA+IG GGS+I D SGA I++++ ++ P +R + I GT +
Sbjct: 446 VCLYIPNTAVGAIIGTGGSSIRDMIMLSGASIKVAQPNKDDPADAHERKVTIVGTPECQW 505
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
RA ++ +K+ E + GT ++ + VP++ G IIGK G T++ ++A+I
Sbjct: 506 RAQSMIFNKVCYE---GCMGNPDGT-LRVEIFVPSNQVGRIIGKGGQTVRELQRLTRALI 561
Query: 156 KI 157
K+
Sbjct: 562 KL 563
>gi|354475601|ref|XP_003500016.1| PREDICTED: poly(rC)-binding protein 2-like [Cricetulus griseus]
Length = 325
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 154/317 (48%), Gaps = 50/317 (15%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R L+ G++I K G ++ + +SGAR +S + +RII ++G + I +A
Sbjct: 17 RLLMHGKEVGSIIAKKGESVKKMREESGARTSISDGN-----CPERIITLAGPTNAIFKA 71
Query: 98 VDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
++IDKL + + ++ LRL+VP S CGS+IGK G IK + + A +
Sbjct: 72 FAMIIDKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 156 KIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLK-LSEDTL-YSQTMTVPY-- 206
+++ L +S + +T+ G +L E ++ + +++L+ LS+ + + +T+ Y
Sbjct: 132 QVAGDMLPNS----TEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHPKGLTITYRP 187
Query: 207 --TYAGVFFSGFH-----GMPYGAVP--------------PPVPAVP-HNTA---AHYGP 241
+ + V F+G G + P PP+ H A +H+
Sbjct: 188 KPSSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPLELTKLHQLALQQSHFPM 247
Query: 242 NMGGRKFQNNKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
G F D +T S + ++++ IG ++GR G I EI Q+SGA+IK ++
Sbjct: 248 THGNTGFSAGLDASAQTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQIKTANP---V 304
Query: 300 SGTSERKVTISGPQRSI 316
G+++R+VTI+G SI
Sbjct: 305 EGSTDRQVTITGSAASI 321
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T +SN L G +IG+ G+ IN+ + SGA+I+ + E G+TDR + I+
Sbjct: 259 DASAQTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVE---GSTDRQVTIT 315
Query: 89 GTIDEI 94
G+ I
Sbjct: 316 GSAASI 321
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 81 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 138
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 139 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 193
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 194 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 249
Query: 216 FHGMPYGAVP---------PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
H M + P P P+ + ++ F N+ + T + + +
Sbjct: 250 LHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETT---YLYIPNN 306
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+G ++G G +I I + S A +K++ D +ERKVTI G A+ MI
Sbjct: 307 AVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIF 366
Query: 325 QKV 327
+K+
Sbjct: 367 EKM 369
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 301 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 360
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ GF M
Sbjct: 361 AQYMIFEKMREE-------------------GF--------------------------M 375
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
G DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 376 CG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 429
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I GP S+++A+ I
Sbjct: 430 DEETPVHIIGPFYSVQSAQRRI 451
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 296 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 353
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 354 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 410
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 411 VTGSVIKL 418
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 143/304 (47%), Gaps = 28/304 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G+ ++ I I G +
Sbjct: 190 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNL--GSLEKAITIYGNPENCTN 247
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A K+L +H E + G T L+++ N+ G IIGK G TIK M D+ I
Sbjct: 248 ACK----KILEVMHQEASNTNKGEIT-LKILAHNNLIGRIIGKGGNTIKRIMQDTDTKIT 302
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G+++ +A +I KL + P + + F G
Sbjct: 303 VSSINDINSFNL-ERIITVKGSIENMSKAEAMISNKLRQSYENDLQAMAPQS---MMFPG 358
Query: 216 FHGMPYGAVPPPVPAVPHNT--AAHYGPNMGGRKFQNNKDDRTNSLT--------IGVAD 265
H M + ++ +N+ A YG +Q+N + LT + + +
Sbjct: 359 LHPMAMMS----TASMGYNSRGPALYGTGPAPYPYQSNLTPQQGVLTSDAQETTFLYIPN 414
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+G ++G G +I I + SGA +K++ + +ERKVTI G S A+ +I
Sbjct: 415 NSVGAIIGTKGSHIRNIIRFSGASVKIAPLESDKPAEQQTERKVTIVGSPESQWKAQYLI 474
Query: 324 MQKV 327
+K+
Sbjct: 475 FEKM 478
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 54/201 (26%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ L D +R VT+ G+ + Q +
Sbjct: 410 LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLESDKPAEQQTERKVTIVGSPESQWK 469
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ F SG
Sbjct: 470 AQYLIFEKMREEG---------------FVSG---------------------------- 486
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD-RGDFFSGT 302
+D ++ I V +G ++G+GG+N+ E+ +++G+ IK+S+ + +
Sbjct: 487 --------TEDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPTAD 538
Query: 303 SERKVTISGPQRSIRTAESMI 323
E V I GP S+++A+ I
Sbjct: 539 EETTVHIIGPFFSVQSAQRRI 559
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P+P + T L+SD E T++ + N GA+IG GS I + SGA ++
Sbjct: 384 PAPYPYQSNLTPQQGVLTSDAQET-TFL--YIPNNSVGAIIGTKGSHIRNIIRFSGASVK 440
Query: 70 LSRSHEFFPG--TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLI 127
++ P T+R + I G+ + +A L+ +K+ E D + + ++
Sbjct: 441 IAPLESDKPAEQQTERKVTIVGSPESQWKAQYLIFEKMREEGFVSGTED---VRLTVEIL 497
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
VP++ G IIGK G ++ + +VIK+S
Sbjct: 498 VPSAQVGRIIGKGGQNVRELQRVTGSVIKLS 528
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 57/211 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++V + G+IIG+ G+TI+ ++A + + R D+ G ++ +T+ G +
Sbjct: 190 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDN--LGSLEKAITIYGNPENCTN 247
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + IL V H A++
Sbjct: 248 ACKKIL----------------------------------------EVMHQEASN----- 262
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NK + T L I + IG ++G+GG I I Q + +I VS D S
Sbjct: 263 ------TNKGEIT--LKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNL 314
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ AE+MI K+ +Y +D
Sbjct: 315 ERIITVKGSIENMSKAEAMISNKLRQSYEND 345
>gi|448533092|ref|XP_003870552.1| hypothetical protein CORT_0F01960 [Candida orthopsilosis Co 90-125]
gi|380354907|emb|CCG24423.1| hypothetical protein CORT_0F01960 [Candida orthopsilosis]
Length = 384
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 137/308 (44%), Gaps = 62/308 (20%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG+ G I+ + ++ + +SR GT +RI+ +SG +D+ +A
Sbjct: 121 RVLVSAKEAGCLIGQNGKVIDSIREETNTKAGISR---LIAGTHERILTVSGKLDDCAKA 177
Query: 98 VDLVIDKLLTE---------LHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSF 147
+ LL L V +T LRL++PNS G++IG GA I+
Sbjct: 178 LSYFAQALLGSSIETYNYFPLKQLSSTPCVEHETTILRLLIPNSQMGTLIGARGARIQQI 237
Query: 148 MDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
Q IS + + G N+RLV L GT+D+ AL +I L ED
Sbjct: 238 ----QHNFAISMIASKSFLPGSNERLVELQGTVDDLYDALRIISRCLIED---------- 283
Query: 206 YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVAD 265
FS G T +Y P ++++ R ++ TI +
Sbjct: 284 -------FSSSVG----------------TTTYYVP-------KSHQLTRKSTATISFPN 313
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G I + ++SGA I + G+ G+ ER TI+G Q+++ A+S++
Sbjct: 314 DMVGALIGKNGSRIQGVRKVSGAMIGI---GEAVEGSDERVFTITGTQQAVEKAKSLLYH 370
Query: 326 KVAYASDR 333
+ R
Sbjct: 371 NLEREEQR 378
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 25/189 (13%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LSS P + T +R L+ N G +IG G+ I Q Q I + S F PG
Sbjct: 197 PLKQLSSTPCVEHETTILRLLIPNSQMGTLIGARGARIQ--QIQHNFAISMIASKSFLPG 254
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------KTKLRL 126
+ +R++ + GT+D++ A+ ++ L+ ED + VGT K+ +
Sbjct: 255 SNERLVELQGTVDDLYDALRIISRCLI-----EDFSSSVGTTTYYVPKSHQLTRKSTATI 309
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
PN G++IGK G+ I+ S A+I I + G ++R+ T+TGT +A
Sbjct: 310 SFPNDMVGALIGKNGSRIQGVRKVSGAMIGIGE---AVEGSDERVFTITGTQQAVEKAKS 366
Query: 187 LILLKLSED 195
L+ L +
Sbjct: 367 LLYHNLERE 375
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSVEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 145 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 200 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 255
Query: 216 FHGMPYGAVPP---------PVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
H M + P P P+ + ++ F N+ + T + + +
Sbjct: 256 LHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETT---FLYIPNN 312
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+G ++G G +I I + S A +K++ D +ERKVTI G A+ MI
Sbjct: 313 AVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIF 372
Query: 325 QKV 327
+K+
Sbjct: 373 EKM 375
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 307 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 366
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ T
Sbjct: 367 AQYMIFEKMREEGFMCGT------------------------------------------ 384
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 385 ---------DDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 435
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I GP S+++A+ I
Sbjct: 436 DEETPVHIIGPFYSVQSAQRRI 457
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISGTIDEILR 96
+ N GA+IG GS I S A ++++ P T+R + I GT + +
Sbjct: 307 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 366
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++ +K+ E DDV + + L+V +S G IIGK G ++ + +VIK
Sbjct: 367 AQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK 423
Query: 157 I 157
+
Sbjct: 424 L 424
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 80 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 137
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 138 ACKRILEVMQQEAISTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 192
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 193 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 248
Query: 216 FHGMPYGAVP---------PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
H M + P P P+ + ++ F N+ + T + + +
Sbjct: 249 LHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETT---YLYIPNN 305
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+G ++G G +I I + S A +K++ D +ERKVTI G A+ MI
Sbjct: 306 AVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIF 365
Query: 325 QKV 327
+K+
Sbjct: 366 EKM 368
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 300 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 359
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ GF M
Sbjct: 360 AQYMIFEKMREE-------------------GF--------------------------M 374
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
G DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 375 CG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 428
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I G S+++A+ I
Sbjct: 429 DEETPVHIIGLFYSVQSAQRRI 450
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 295 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 352
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 353 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 409
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 410 VTGSVIKL 417
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 81 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 138
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 139 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 193
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 194 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 249
Query: 216 FHGMPYGAVPP---------PVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
H M + P P P+ + ++ F N+ + T + + +
Sbjct: 250 LHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETT---YLYIPNN 306
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+G ++G G +I I + S A +K++ D +ERKVTI G A+ MI
Sbjct: 307 AVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQFMIF 366
Query: 325 QKV 327
+K+
Sbjct: 367 EKM 369
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 301 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 360
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ GF M
Sbjct: 361 AQFMIFEKMREE-------------------GF--------------------------M 375
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
G DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 376 CG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 429
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I GP S+++A+ I
Sbjct: 430 DEETPVHIIGPFYSVQSAQRRI 451
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 296 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 353
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 354 TPEGQWKAQFMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 410
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 411 VTGSVIKL 418
>gi|344276217|ref|XP_003409905.1| PREDICTED: poly(rC)-binding protein 4-like [Loxodonta africana]
Length = 362
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 127/274 (46%), Gaps = 27/274 (9%)
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE--DQADDVGT 120
+S ARI +S +RI I+G+ + AV ++ KL +L A + +
Sbjct: 5 RSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNISRP 59
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTGTL 178
LRL++P S CGS+IGKAG IK + + A ++++ L +S +R VT++G
Sbjct: 60 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNS----TERAVTVSGVP 115
Query: 179 DEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSGFHGMP----YGAVPPPVPA 230
D + + I + E + T+PY + V S G YGAV P
Sbjct: 116 DAIILCVRQICAVILESP--PKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 173
Query: 231 VPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
+ H P + +T+S V ++ IG V+GR G I EI Q+SGA
Sbjct: 174 KLQQLSGHTVPFASPSVVAGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 233
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 234 IKIGNQAE---GAGERHVTITGSPVSIALAQYLI 264
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 60/202 (29%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG
Sbjct: 57 SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGV 114
Query: 91 IDEILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TK 123
D I+ V + +L T L + +Q V + TK
Sbjct: 115 PDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTK 174
Query: 124 LR----------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
L+ +VPN G +IG+ G+ I S A I
Sbjct: 175 LQQLSGHTVPFASPSVVAGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 234
Query: 156 KISRLDHSYYGLNDRLVTLTGT 177
KI + G +R VT+TG+
Sbjct: 235 KI---GNQAEGAGERHVTITGS 253
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 195 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 251
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 252 GSPVSIALAQYLITACLET 270
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 80 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 137
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 138 ACKRILEVMQQEAISTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 192
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 193 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 248
Query: 216 FHGMPYGAVP---------PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
H M + P P P+ + ++ F N+ + T + + +
Sbjct: 249 LHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETT---YLYIPNN 305
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+G ++G G +I I + S A +K++ D +ERKVTI G A+ MI
Sbjct: 306 AVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIF 365
Query: 325 QKV 327
+K+
Sbjct: 366 EKM 368
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 300 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 359
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ GF M
Sbjct: 360 AQYMIFEKMREE-------------------GF--------------------------M 374
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
G DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 375 CG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 428
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I G S+++A+ I
Sbjct: 429 DEETPVHIIGLFYSVQSAQRRI 450
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 295 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 352
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 353 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 409
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 410 VTGSVIKL 417
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 40/310 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G ++ I I G +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL--GAAEKAITIYGNPENCTN 246
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ E + + + LR++ N+ G IIGK G TIK M D+ I
Sbjct: 247 ACKKIMEVTQQEAYGLSKGE-----ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKIT 301
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ G++D +A +I KL + + Q++ P
Sbjct: 302 VSSINDINNFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHP 360
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVP---AVPHNTAAHYGPNMGGRKFQNNKDDRTNSL 259
+ AG+ +S YG+ P P P ++P G D +
Sbjct: 361 MAMMSTAGMGYSSRGPGLYGSGPAPYPYQTSLPTQQGIPIG-------------DTQETA 407
Query: 260 TIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIR 317
+ + + +G ++G G +I I + SGA +K++ ++ ++RKVTI G S
Sbjct: 408 FLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQW 467
Query: 318 TAESMIMQKV 327
A+ +I +K+
Sbjct: 468 KAQYLIFEKM 477
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 54/209 (25%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ + D NDR VT+ G+ + Q +
Sbjct: 409 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK 468
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ GF G
Sbjct: 469 AQYLIFEKMREE-------------------GFVG------------------------- 484
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF-SGT 302
+D ++ I V +G ++G+GG+N+ E+ +++G+ IK+S++ S
Sbjct: 485 -------GTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSAD 537
Query: 303 SERKVTISGPQRSIRTAESMIMQKVAYAS 331
E V I GP S+++A+ I V +S
Sbjct: 538 EEATVQIIGPFFSVQSAQRRIRAMVLQSS 566
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYI------RFL-VSNPLAGAVIGKGGSTINDFQSQS 64
P ++G AP +S PT++ I FL + N GA+IG GS I + S
Sbjct: 376 PGLYGS-GPAPYPYQTSLPTQQGIPIGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIRFS 434
Query: 65 GARIQLSRSHEFFP--GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT 122
GA ++++ + P DR + I G+ + +A L+ +K+ E D +
Sbjct: 435 GASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLIFEKMREEGFVGGTED---VRL 491
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+ ++VP++ G IIGK G ++ + ++IK+S
Sbjct: 492 TIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLS 527
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 57/211 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++V + G+IIG+ G+TI+ ++A + + R D G ++ +T+ G +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDS--LGAAEKAITIYGNPENCTN 246
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + I+ ++++ Y G+ G +
Sbjct: 247 ACKKIM-EVTQQEAY-------------------GLSKGEI------------------- 267
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
SL I + IG ++G+GG I +I Q + +I VS D +
Sbjct: 268 --------------SLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNL 313
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ AESMI K+ +Y +D
Sbjct: 314 ERIITVKGSIDNMSKAESMISSKLRQSYEND 344
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 140/305 (45%), Gaps = 23/305 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 138 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 195
Query: 97 AVDLVIDKLLTELHAEDQAD--DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +++ + E + ++ + ++ L+++ N+ G IIGK+G TIK M D+
Sbjct: 196 ACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 255
Query: 155 IKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
I +S + D + + L +R++T+ G ++ RA I KL + P + + F
Sbjct: 256 ITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMF 311
Query: 214 SGFHGMPYGAVP---------PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
G H M + P P P+ + ++ F N+ + T + +
Sbjct: 312 PGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETT---YLYIP 368
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESM 322
+ +G ++G G +I I + S A +K++ D +ERKVTI G A+ M
Sbjct: 369 NNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYM 428
Query: 323 IMQKV 327
I +K+
Sbjct: 429 IFEKM 433
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 365 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 424
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ GF M
Sbjct: 425 AQYMIFEKMREE-------------------GF--------------------------M 439
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
G DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 440 CG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 493
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I G S+++A+ I
Sbjct: 494 DEETPVHIIGLFYSVQSAQRRI 515
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 360 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 417
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 418 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 474
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 475 VTGSVIKL 482
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 140/305 (45%), Gaps = 23/305 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 202
Query: 97 AVDLVIDKLLTELHAEDQAD--DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +++ + E + ++ + ++ L+++ N+ G IIGK+G TIK M D+
Sbjct: 203 ACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 262
Query: 155 IKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
I +S + D + + L +R++T+ G ++ RA I KL + P + + F
Sbjct: 263 ITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMF 318
Query: 214 SGFHGMPYGAVP---------PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
G H M + P P P+ + ++ F N+ + T + +
Sbjct: 319 PGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETT---YLYIP 375
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESM 322
+ +G ++G G +I I + S A +K++ D +ERKVTI G A+ M
Sbjct: 376 NNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYM 435
Query: 323 IMQKV 327
I +K+
Sbjct: 436 IFEKM 440
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 372 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 431
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ GF M
Sbjct: 432 AQYMIFEKMREE-------------------GF--------------------------M 446
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
G DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 447 CG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 500
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I G S+++A+ I
Sbjct: 501 DEETPVHIIGLFYSVQSAQRRI 522
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 367 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 424
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 425 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 481
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 482 VTGSVIKL 489
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 140/305 (45%), Gaps = 23/305 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQAD--DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +++ + E + ++ + ++ L+++ N+ G IIGK+G TIK M D+
Sbjct: 145 ACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 204
Query: 155 IKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
I +S + D + + L +R++T+ G ++ RA I KL + P + + F
Sbjct: 205 ITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAIAPQS---LMF 260
Query: 214 SGFHGMPYGAVP---------PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
G H M + P P P+ + ++ F N+ + T + +
Sbjct: 261 PGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETT---YLYIP 317
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESM 322
+ +G ++G G +I I + S A +K++ D +ERKVTI G A+ M
Sbjct: 318 NNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYM 377
Query: 323 IMQKV 327
I +K+
Sbjct: 378 IFEKM 382
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 314 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 373
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ GF M
Sbjct: 374 AQYMIFEKMREE-------------------GF--------------------------M 388
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
G DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 389 CG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 442
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I G S+++A+ I
Sbjct: 443 DEETPVHIIGLFYSVQSAQRRI 464
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 309 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 366
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 367 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 423
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 424 VTGSVIKL 431
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 140/305 (45%), Gaps = 23/305 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQAD--DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +++ + E + ++ + ++ L+++ N+ G IIGK+G TIK M D+
Sbjct: 145 ACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 204
Query: 155 IKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
I +S + D + + L +R++T+ G ++ RA I KL + P + + F
Sbjct: 205 ITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMF 260
Query: 214 SGFHGMPYGAVP---------PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
G H M + P P P+ + ++ F N+ + T + +
Sbjct: 261 PGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETT---YLYIP 317
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESM 322
+ +G ++G G +I I + S A +K++ D +ERKVTI G A+ M
Sbjct: 318 NNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYM 377
Query: 323 IMQKV 327
I +K+
Sbjct: 378 IFEKM 382
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 314 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 373
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ GF M
Sbjct: 374 AQYMIFEKMREE-------------------GF--------------------------M 388
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
G DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 389 CG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 442
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I G S+++A+ I
Sbjct: 443 DEETPVHIIGLFYSVQSAQRRI 464
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 309 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 366
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 367 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 423
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 424 VTGSVIKL 431
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 145 ACKRILEVMQQEAISTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 200 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 255
Query: 216 FHGMPYGAVP---------PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
H M + P P P+ + ++ F N+ + T + + +
Sbjct: 256 LHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETT---YLYIPNN 312
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+G ++G G +I I + S A +K++ D +ERKVTI G A+ MI
Sbjct: 313 AVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIF 372
Query: 325 QKV 327
+K+
Sbjct: 373 EKM 375
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 55/202 (27%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 307 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 366
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ GF M
Sbjct: 367 AQYMIFEKMREE-------------------GF--------------------------M 381
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
G DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 382 CG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGG 435
Query: 302 TSERKVTISGPQRSIRTAESMI 323
E V I G S+++A+ I
Sbjct: 436 DEETPVHIIGLFYSVQSAQRRI 457
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ P T+R + I G
Sbjct: 302 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 359
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 360 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 416
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 417 VTGSVIKL 424
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 40/310 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G ++ I I G +
Sbjct: 139 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL--GAAEKAITIYGNPENCTN 196
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ E + + + LR++ N+ G IIGK G TIK M D+ I
Sbjct: 197 ACKKIMEVTQQEAYGLSKGE-----ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKIT 251
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ G++D +A +I KL + + Q++ P
Sbjct: 252 VSSINDINNFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHP 310
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVP---AVPHNTAAHYGPNMGGRKFQNNKDDRTNSL 259
+ AG+ +S YG+ P P P ++P G D +
Sbjct: 311 MAMMSTAGMGYSSRGPGLYGSGPAPYPYQTSLPTQQGIPIG-------------DTQETA 357
Query: 260 TIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIR 317
+ + + +G ++G G +I I + SGA +K++ ++ ++RKVTI G S
Sbjct: 358 FLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQW 417
Query: 318 TAESMIMQKV 327
A+ +I +K+
Sbjct: 418 KAQYLIFEKM 427
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 54/209 (25%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ + D NDR VT+ G+ + Q +
Sbjct: 359 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK 418
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ GF G
Sbjct: 419 AQYLIFEKMREE-------------------GFVG------------------------- 434
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF-SGT 302
+D ++ I V +G ++G+GG+N+ E+ +++G+ IK+S++ S
Sbjct: 435 -------GTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSAD 487
Query: 303 SERKVTISGPQRSIRTAESMIMQKVAYAS 331
E V I GP S+++A+ I V +S
Sbjct: 488 EEATVQIIGPFFSVQSAQRRIRAMVLQSS 516
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISGTIDEILR 96
+ N GA+IG GS I + SGA ++++ + P DR + I G+ + +
Sbjct: 359 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK 418
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A L+ +K+ E D + + ++VP++ G IIGK G ++ + ++IK
Sbjct: 419 AQYLIFEKMREEGFVGGTED---VRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK 475
Query: 157 IS 158
+S
Sbjct: 476 LS 477
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 57/211 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++V + G+IIG+ G+TI+ ++A + + R D G ++ +T+ G +
Sbjct: 139 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDS--LGAAEKAITIYGNPENCTN 196
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + I+ ++++ Y G+ G +
Sbjct: 197 ACKKIM-EVTQQEAY-------------------GLSKGEI------------------- 217
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
SL I + IG ++G+GG I +I Q + +I VS D +
Sbjct: 218 --------------SLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNL 263
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ AESMI K+ +Y +D
Sbjct: 264 ERIITVKGSIDNMSKAESMISSKLRQSYEND 294
>gi|19075184|ref|NP_587684.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|74626925|sp|O74919.1|RNC1_SCHPO RecName: Full=RNA-binding protein rnc1; AltName: Full=RNA-binding
protein that suppresses calcineurin deletion 1
gi|3702642|emb|CAA21234.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces pombe]
Length = 398
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 136/310 (43%), Gaps = 23/310 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+S AG +IGK G + + +S + + ++++ P DR++ ISG ++ ++R
Sbjct: 96 LRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKA---VPNVHDRVLTISGPLENVVR 152
Query: 97 AVDLVIDKLLTELHAED-QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A +ID D D T KLRL++ +S GSIIG+ G IK D +
Sbjct: 153 AYRFIIDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRM 212
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
S+ L S +R V + GT+D A+ I L +D TV Y
Sbjct: 213 IASKDMLPQS----TERTVEIHGTVDNLHAAIWEIGKCLIDD-WERGAGTVFYNPVSRLT 267
Query: 214 SGFHGMPYGAVPPPV--PAVPHNTAAHYGP----NMGGRKFQNNK----DDRTNSLTIGV 263
+ A P V PA P T+ P + G + F + + I +
Sbjct: 268 QPLPSLASTASPQQVSPPAAPSTTSGEAIPENFVSYGAQVFPATQMPFLQQPKVTQNISI 327
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ +G ++GRGG I EI + SG++I ++ + T ER TI+G A ++
Sbjct: 328 PADMVGCIIGRGGSKISEIRRTSGSKISIAK--EPHDETGERMFTITGTHEENEKALFLL 385
Query: 324 MQKVAYASDR 333
Q++ DR
Sbjct: 386 YQQLEMEKDR 395
>gi|47214279|emb|CAG01336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 67/333 (20%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
VS L+G + + FQ QSGARI +S + +RI+ I+G D I +A +
Sbjct: 73 VSTWLSGRLPLPDARLLLSFQ-QSGARINISEGN-----CPERIVTITGPTDAIFKAFAM 126
Query: 101 VIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+ K ++ +K LRL+VP S CGS+IGK G+ IK + + A ++++
Sbjct: 127 IAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVA 186
Query: 159 --RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVF 212
L +S +R VT++GT + ++ ++ I + + E + T+PY V
Sbjct: 187 GDMLPNS----TERAVTISGTPEAIIQCVKQICVVMLESP--PKGATIPYRPKPASTPVI 240
Query: 213 FSGFHGMPYG-----AVP---------------PPVPAVPHNTAAH---YGPNMGGRKFQ 249
FSG G Y A+P PP + T A Y P R Q
Sbjct: 241 FSG--GQAYTIQGQYAIPHPDQLSKLHQLAMQQPPFTPLGQTTPAFPGTYPPTWRPRWPQ 298
Query: 250 ----------NNKDDRTNSLTIG---------VADEHIGFVVGRGGRNIMEISQISGARI 290
+ T +L G + ++ IG ++GR G I EI Q+SGA+I
Sbjct: 299 LLLSFVPADARSSSSVTAALDAGNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 358
Query: 291 KVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
K+++ G+SER++TI+G +I A+ +I
Sbjct: 359 KIANA---MEGSSERQITITGTPANISLAQYLI 388
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 136 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNS 193
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT + I++ V + +L
Sbjct: 194 TERAVTISGTPEAIIQCVKQICVVML 219
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 329 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSERQITITGTPANISLAQ 385
Query: 99 DLV 101
L+
Sbjct: 386 YLI 388
>gi|198469242|ref|XP_001354960.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
gi|198146781|gb|EAL32016.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 145 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 200 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 255
Query: 216 FHGMPYGAVPP---------PVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
H M + P P P+ + ++ F N+ + T + + +
Sbjct: 256 LHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETT---YLYIPNN 312
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+G ++G G +I I + S A +K++ D +ERKVTI G A+ MI
Sbjct: 313 AVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIF 372
Query: 325 QKV 327
+K+
Sbjct: 373 EKM 375
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 55/196 (28%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD--HSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 307 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 366
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K+ E+ T
Sbjct: 367 AQYMIFEKMREEGFMCGT------------------------------------------ 384
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR--GDFFSG 301
DD ++ + VA +G ++G+GG+N+ E+ +++G+ IK+ + G
Sbjct: 385 ---------DDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPAGG 435
Query: 302 TSERKVTISGPQRSIR 317
E V I GP S++
Sbjct: 436 DEETPVHIIGPFYSVQ 451
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 302 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 359
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 360 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 416
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 417 VTGSVIKL 424
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 46/313 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G ++ I I G +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL--GAAEKAITIYGNPENCTN 246
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ E + + + LR++ N+ G IIGK G TIK M D+ I
Sbjct: 247 ACKKIMEVTQQEAYGLSKGE-----ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKIT 301
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G++D +A +I KL + P + + F G
Sbjct: 302 VSSINDINNFNL-ERIITVKGSIDNMSKAESMISNKLRQSYENDLQAMAPQS---LMFPG 357
Query: 216 FHGMP----------------YGAVPPPVP---AVPHNTAAHYGPNMGGRKFQNNKDDRT 256
H M YG+ P P P ++P G D
Sbjct: 358 LHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQASLPTQQGIPIG-------------DTQ 404
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQR 314
+ + + + +G ++G G +I I + SGA +K++ ++ ++RKVTI G
Sbjct: 405 ETAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVDQQNDRKVTIVGSPE 464
Query: 315 SIRTAESMIMQKV 327
S A+ +I +K+
Sbjct: 465 SQWKAQYLIFEKM 477
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 54/209 (25%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ + D NDR VT+ G+ + Q +
Sbjct: 409 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVDQQNDRKVTIVGSPESQWK 468
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ + T V T
Sbjct: 469 AQYLIFEKMREEGFVAGTEDVRLT------------------------------------ 492
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF-SGT 302
+ I V +G ++G+GG+N+ E+ +++G+ IK+S++ S
Sbjct: 493 ---------------IEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSAD 537
Query: 303 SERKVTISGPQRSIRTAESMIMQKVAYAS 331
E V I GP S+++A+ I V +S
Sbjct: 538 EEATVQIIGPFFSVQSAQRRIRAMVLQSS 566
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYI------RFL-VSNPLAGAVIGKGGSTINDFQSQS 64
P ++G AP +S PT++ I FL + N GA+IG GS I + S
Sbjct: 376 PGLYGS-GPAPYPYQASLPTQQGIPIGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIRFS 434
Query: 65 GARIQLSRSHEFFP--GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT 122
GA ++++ + P DR + I G+ + +A L+ +K+ E D +
Sbjct: 435 GASVKIAPIEQDKPVDQQNDRKVTIVGSPESQWKAQYLIFEKMREEGFVAGTED---VRL 491
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+ ++VP++ G IIGK G ++ + ++IK+S
Sbjct: 492 TIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLS 527
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 57/211 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++V + G+IIG+ G+TI+ ++A + + R D G ++ +T+ G +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDS--LGAAEKAITIYGNPENCTN 246
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + I+ ++++ Y G+ G +
Sbjct: 247 ACKKIM-EVTQQEAY-------------------GLSKGEI------------------- 267
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
SL I + IG ++G+GG I +I Q + +I VS D +
Sbjct: 268 --------------SLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNL 313
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ AESMI K+ +Y +D
Sbjct: 314 ERIITVKGSIDNMSKAESMISNKLRQSYEND 344
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 151/338 (44%), Gaps = 58/338 (17%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+S P + +R L G VIGKGG TI + SGAR+++ + D I
Sbjct: 299 ISGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKR----DCDECI 354
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ + + + + ++ +L L E DD G +RL++P+ G IIGK+G+ I
Sbjct: 355 ITISSFESLDDLKSMAVETVL--LLQEKINDDEGGTVIMRLLIPSKVIGCIIGKSGSIIN 412
Query: 146 SFMDDSQAVIKISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY------ 198
++A I+IS+ D +D LV +TG + AL I+L+L +D L
Sbjct: 413 EIRKSTRADIRISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGH 472
Query: 199 -SQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG------------- 244
S +T +G FS +P +V P P + ++ A G +G
Sbjct: 473 NSAIVTDSMYSSGSSFSMPSVLP--SVSPGAPPMGYDQRAESGSGLGVLSSSGLYGSGSL 530
Query: 245 -----GRKFQNNKDDRT-------NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
G + ++ + +SL + + G V+G+GG NI I +ISGA I++
Sbjct: 531 SMGDNGYGYMSSYSSKLYGGLPPPSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEI 590
Query: 293 SD----RGD---FFSGTSERKVTISGPQRSIRTAESMI 323
SD RGD SGTSE+K RTAE++I
Sbjct: 591 SDSKSSRGDRIALISGTSEQK----------RTAENLI 618
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 150/358 (41%), Gaps = 72/358 (20%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI-DEILR 96
R L + + G+VIGK G IN + ++ A+I++ + FPG DR+I I + D+
Sbjct: 39 RILCPDEVIGSVIGKSGKVINSIRQETRAKIKVV---DPFPGAKDRVITIFCFVKDKEDV 95
Query: 97 AVDLVIDKLLTELHAEDQADDVGT------------------KTKLRLIVPNSSCGSIIG 138
VD + T A+D V K + ++++P+S ++IG
Sbjct: 96 EVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSSQSANVIG 155
Query: 139 KAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL---ELILL 190
KAG+TIK ++ IKIS D HS D + G + RAL I+
Sbjct: 156 KAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMY 215
Query: 191 KL---SEDTLYSQTMTVP-----------YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTA 236
K E L + P Y+ G++ S +P ++PP + A H
Sbjct: 216 KFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADPILPPRSIPPMLGA-QHVQD 274
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTI---GVAD---------------EHIGFVVGRGGRN 278
H P G N ++SL + G++ ++IG V+G+GG
Sbjct: 275 LHDYPESG-----NAWPLYSSSLPVVPGGISGHPPSEELVVRVLCPFDNIGRVIGKGGGT 329
Query: 279 IMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
I I Q SGAR++V D E +TIS + S+ +SM ++ V +++ D
Sbjct: 330 IKSIRQASGARVEVDDTK---RDCDECIITISSFE-SLDDLKSMAVETVLLLQEKIND 383
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 232 PHNTAAHYGPNMGGRKFQNNKDDRTNS----LTIGVADEHIGFVVGRGGRNIMEISQISG 287
P+ + G N G ++ +DD + I DE IG V+G+ G+ I I Q +
Sbjct: 7 PYGQRDYNGDNKGYKRRITEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINSIRQETR 66
Query: 288 ARIKVSDRGDFFSGTSERKVTI 309
A+IKV D F G +R +TI
Sbjct: 67 AKIKVVDP---FPGAKDRVITI 85
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 157/348 (45%), Gaps = 63/348 (18%)
Query: 19 STAPVKSLSSDPTE-KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
S PV S D ++ + IR L + G VIG+GGSTI + SG RI++ S
Sbjct: 103 SALPVVSGGVDASQSEELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSK--- 159
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDK-LLTELHAEDQADDVGTKTKLRLIVPNSSCGSI 136
D ++I T + + ++ LL + D+ D T+ ++L+VP+ G I
Sbjct: 160 -ANHDECLIIITTTESPSDLKSMAVEAVLLIQGKISDEDD---TEVSIQLLVPSKVIGCI 215
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSED 195
IGK+G+ I ++A I+IS+ D +ND LV + G +D AL I+L+L +D
Sbjct: 216 IGKSGSIINEIRKRTRADIRISKGDKPKCADVNDELVEVGGAIDCVRDALIQIILRLRDD 275
Query: 196 TLYSQ-TMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP-------HNTAAHYGPNMG--- 244
L + T P +SG G Y ++PP +P+V ++ A MG
Sbjct: 276 VLRERDTGHNPTIGGESLYSG--GAAY-SLPPMLPSVSSVAAPMVYDQRAESATGMGMLS 332
Query: 245 ----------GRKFQNNKDDRT-------------NSLTIGVADEHIGFVVGRGGRNIME 281
+ +++ + ++L I + +G V+G+GG NI
Sbjct: 333 SSSLYGYGSLSQMWESGYGSISSYPTKLYGSLPPPSTLDILIPANAVGKVLGKGGANIAN 392
Query: 282 ISQISGARIKVSD---RGD---FFSGTSERKVTISGPQRSIRTAESMI 323
I +ISGA I++SD RGD SGT E K R AE++I
Sbjct: 393 IRKISGATIEISDARARGDRIALISGTPEEK----------RAAENLI 430
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 15 HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
+G S+ P K S P P+ + L+ G V+GKGG+ I + + SGA I++S +
Sbjct: 350 YGSISSYPTKLYGSLP--PPSTLDILIPANAVGKVLGKGGANIANIRKISGATIEISDAR 407
Query: 75 EFFPGTTDRIIMISGTIDEILRAVDLV 101
DRI +ISGT +E A +L+
Sbjct: 408 ----ARGDRIALISGTPEEKRAAENLI 430
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 141/307 (45%), Gaps = 34/307 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ G+TI + AR+ + R G+ ++ I I G +
Sbjct: 114 LRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNV--GSLEKAITIYGNPENCTN 171
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK G TIK M D+ I
Sbjct: 172 ACKKILEVMQQEANNTNKGE-----ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKIT 226
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ G++D +A +I KL + + Q+M P
Sbjct: 227 VSSINDINSFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHP 285
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIG 262
+ AG+ +S YG+ P P P P D + +
Sbjct: 286 MAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQGVP----------ASDTQETTFLY 335
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAE 320
+ + +G ++G G +I I + SGA +K++ ++ +ERKVTI G S A+
Sbjct: 336 IPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQ 395
Query: 321 SMIMQKV 327
+I +K+
Sbjct: 396 YLIFEKM 402
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 58/207 (28%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ L D +R VT+ G+ + Q +
Sbjct: 334 LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWK 393
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ + T V T
Sbjct: 394 AQYLIFEKMREEGYVAGTEDVRLT------------------------------------ 417
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD-RGDFFSGT 302
+ I V +G ++G+GG+N+ E+ +++G+ IK+S+ + S
Sbjct: 418 ---------------IEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAE 462
Query: 303 SERKVTISGPQRSIRTAE----SMIMQ 325
E V I GP S+++A+ +M++Q
Sbjct: 463 EETTVHIIGPFFSVQSAQRRIRAMVLQ 489
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 8 YVPSPDVHGKRSTAPVKS-LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGA 66
Y P + +S+ P + + + T++ T++ + N GA+IG GS I + SGA
Sbjct: 304 YGSGPAPYPYQSSLPTQQGVPASDTQETTFL--YIPNNSVGAIIGTKGSHIRNIIRFSGA 361
Query: 67 RIQLSRSHEFFPG--TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKL 124
++++ + P T+R + I G+ + +A L+ +K+ E + D + +
Sbjct: 362 SVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLIFEKMREEGYVAGTED---VRLTI 418
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
++VP++ G IIGK G ++ + +VIK+S
Sbjct: 419 EILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLS 452
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 57/211 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++V + G+IIG+ G TI+ ++A + + R D+ G ++ +T+ G +
Sbjct: 114 LRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDN--VGSLEKAITIYGNPENCTN 171
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + IL + ++
Sbjct: 172 ACKKILEVMQQEA----------------------------------------------- 184
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN + +L I + IG ++G+GG I I Q + +I VS D S
Sbjct: 185 ------NNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNL 238
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ AESMI K+ +Y +D
Sbjct: 239 ERIITVKGSIDNMSKAESMISSKLRQSYEND 269
>gi|392558575|gb|EIW51762.1| hypothetical protein TRAVEDRAFT_156921 [Trametes versicolor
FP-101664 SS1]
Length = 378
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 152/333 (45%), Gaps = 40/333 (12%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S AP S P ++R L+ A +IGK GS +N+ + +SGAR+ +S E P
Sbjct: 47 SGAPSSSGQPTPPAANIHMRCLIVTQDASIIIGKAGSHVNEIREKSGARVVVS---ESIP 103
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSII 137
G +RI+ +SG +D + +A L++ ++ E D+ G++ ++ ++PNS GS+I
Sbjct: 104 GNPERILNVSGPLDAVSKAFGLIVRRINDEPF--DKPSVPGSRAVTIKFMIPNSRMGSVI 161
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GK G IK + S A + S + G +RL++++G D A+ + + + L
Sbjct: 162 GKGGTKIKEIQEASGARLNAS--ETMLPGSTERLLSVSGVAD----AIHIATYYIG-NIL 214
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN-MGGRKFQN------ 250
+P T S + Y A P + P + G + + G QN
Sbjct: 215 IEANERMPTTN----NSSYRPSSYQASSAPPSSTPRGRPPYSGSSYVPGGYGQNPYAPAA 270
Query: 251 ------NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS- 303
+ + I + ++ +G ++G+GG I EI +S ++IK+ + G G +
Sbjct: 271 PAAPAPGPPSQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGLNG 330
Query: 304 ---------ERKVTISGPQRSIRTAESMIMQKV 327
ER V I+G +I+ A ++ ++
Sbjct: 331 AAAPAGSEGERLVVITGQPANIQMAVQLLYSRL 363
>gi|302692864|ref|XP_003036111.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
gi|300109807|gb|EFJ01209.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
Length = 282
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 137/305 (44%), Gaps = 52/305 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IG+ G+ +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 3 HMRCLIVTQDASIIIGRAGAHVNEIREKSGARVVVS---ESIPGNPERILNVSGPLDAVS 59
Query: 96 RAVDLVIDKLLTELHAEDQADDV----GTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+A L++ ++ D+ DV G++ ++ ++PNS GS+IGK G+ IK D
Sbjct: 60 KAFGLIVRRI------NDEPFDVPSLPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDA 113
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
S A + S + G +R++++ G D ++ T Y
Sbjct: 114 SGARLNAS--EGMLPGSTERVLSVAGV----------------ADAIHIAT----YYVGN 151
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGF 270
+ MP A P P P G Q + I + ++ +G
Sbjct: 152 ILIEAQERMPSTANASYRPGNPTRRPITNAPYPGSTYVQTQQ--------IYIPNDLVGC 203
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGT--------SERKVTISGPQRSIRTAESM 322
++G+GG I EI +S ++IK+ + G +G ER V I+G +I+ A M
Sbjct: 204 IIGKGGSKINEIRHMSASQIKIMEPGAVATGMPAGAAGSEGERLVVITGQPANIQMAVQM 263
Query: 323 IMQKV 327
+ ++
Sbjct: 264 LYHRL 268
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 30/198 (15%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P + I+F++ N G+VIGKGGS I + Q SGAR L+ S PG+T+R++
Sbjct: 76 VPSLPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAR--LNASEGMLPGSTERVL 133
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKTK----------------LR 125
++G D I A V + L+ + G T+ +
Sbjct: 134 SVAGVADAIHIATYYVGNILIEAQERMPSTANASYRPGNPTRRPITNAPYPGSTYVQTQQ 193
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL--------NDRLVTLTGT 177
+ +PN G IIGK G+ I S + IKI G+ +RLV +TG
Sbjct: 194 IYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVATGMPAGAAGSEGERLVVITGQ 253
Query: 178 LDEQMRALELILLKLSED 195
A++++ +L ++
Sbjct: 254 PANIQMAVQMLYHRLEQE 271
>gi|448086121|ref|XP_004196024.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
gi|359377446|emb|CCE85829.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
Length = 362
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 145/319 (45%), Gaps = 66/319 (20%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS +G +IG+ G+ I+ ++++ + +S+ PG+ +RI+ +SGT+D +A
Sbjct: 77 RVLVSAKESGCLIGQNGAVIDSIRAETNTKAGISK---LQPGSHERILTVSGTLDNSAKA 133
Query: 98 VDLVIDKL---------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
+ L L +L D+ T LRL++PN+ G++IG G
Sbjct: 134 LSYFAQALCNARVANTLNYNYFPLKQLSPVPCIDE--ETTILRLLIPNAQMGTLIGSKGI 191
Query: 143 TIKSFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
I+ Q++ IS + + G N+RLV L GT+D AL +I L ED
Sbjct: 192 RIQQI----QSMYNISMIASKAFLQGSNERLVELQGTVDNLYDALRVISRCLIED----- 242
Query: 201 TMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGG---------RKFQNN 251
FS G Y VP ++A+ G N+ G + N
Sbjct: 243 ------------FSSIVGTHY--------YVPKGSSANNG-NLNGLTRRDSSGSSRRYGN 281
Query: 252 KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
++ T +LT ++ +G ++G+ G I + +ISGA I +S+ S+R TI+G
Sbjct: 282 QNVSTTTLTF--PNDVVGALIGKNGSRIQGVRKISGATITISNE---VENQSDRVFTITG 336
Query: 312 PQRSIRTAESMIMQKVAYA 330
P +I A+S++ + A
Sbjct: 337 PSHAIEKAKSLLYHNLQRA 355
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 28/301 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI D Q+ +++ + R G ++ I I T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCSA 258
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E + +D+ L+++ NS G +IGK G +K +D+ I
Sbjct: 259 ACRMILDIMQKEANETKTTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKIT 314
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---Y 206
IS L D + Y +R +T+ G++D +A I KL E + Q +P
Sbjct: 315 ISSLQDLTIYN-PERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGLNL 373
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
G+F SG +P A P AVP A Y P + + + + + +
Sbjct: 374 NALGIFSSGLPVLPPAA--GPRSAVPAVAPAGYNPFL-------QQAPEQEVVYLFIPTQ 424
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+G ++G+ G++I +++ +GA IK++ +ER V I+G + A+ I K
Sbjct: 425 AVGALIGKKGQHIKQLAHFAGASIKIAPAES--PDVTERMVIITGTPEAQFKAQGRIFGK 482
Query: 327 V 327
+
Sbjct: 483 L 483
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 12 PDVHGKRSTAPVKS-------LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQS 64
P G RS P + L P ++ Y+ + GA+IGK G I +
Sbjct: 387 PPAAGPRSAVPAVAPAGYNPFLQQAPEQEVVYL--FIPTQAVGALIGKKGQHIKQLAHFA 444
Query: 65 GARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKT 122
GA I+++ + P T+R+++I+GT + +A + KL E A+++ K
Sbjct: 445 GASIKIAPAES--PDVTERMVIITGTPEAQFKAQGRIFGKLKEENFFSAKEE-----VKL 497
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+ + VP+S+ G +IGK G T+ + + A + + R
Sbjct: 498 ETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPR 534
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TIK +Q+ + I R +++ G ++ +T+ T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENA--GAAEKPITIHSTPEGCSA 258
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL + ++ ++T +P AH
Sbjct: 259 ACRMILDIMQKEANETKTTE--------------------------DIPLKILAH----- 287
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NSL +G ++G+ GRN+ +I + +G +I +S D
Sbjct: 288 -------------NSL--------VGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNP 326
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE I +K+ AY +D
Sbjct: 327 ERTITVKGSIDACCKAEVEITKKLREAYEND 357
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G++IGK G IK + A IKI+ + + +R+V +TGT + Q +A
Sbjct: 419 LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESP--DVTERMVIITGTPEAQFKAQ 476
Query: 186 ELILLKLSEDTLYS 199
I KL E+ +S
Sbjct: 477 GRIFGKLKEENFFS 490
>gi|326430629|gb|EGD76199.1| hypothetical protein PTSG_00905 [Salpingoeca sp. ATCC 50818]
Length = 947
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 135/304 (44%), Gaps = 20/304 (6%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID- 92
P ++ +V L GA+IG+GG+ I S AR++L R G R + I G+++
Sbjct: 185 PFPVQLVVRPSLVGAIIGRGGANIRQLSQVSRARVELERRDPHL-GAVGRRVFIDGSLNN 243
Query: 93 --EILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
E RA+ ++ EL+ E+ + T +++++P G +IG+AGA+IK +
Sbjct: 244 TVEAFRALVQLMADNDVELNGEEPVEAEDRITSIQMMIPGEMVGHLIGRAGASIKYITET 303
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
S A I++ L + R+V + GT + A L+L K S S + G
Sbjct: 304 SGAGIELLPLQYPANMSPVRIVKIEGTPRQLTHAFALMLRKFSNAMRRSMEVMRGPPMMG 363
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGF 270
+ MP A PP VP YGP G +T+ V +G
Sbjct: 364 MMQQQQQQMPGMA-PPYVPG--------YGP---GPMMMAP----VEVITVRVPAWSVGA 407
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYA 330
++GRGG NI + + +GA I++ + GD ER + G A ++I +++
Sbjct: 408 LIGRGGSNIKHMMEETGAEIRIQNSGDDVEEPLERDCVVRGTTEQQVRAHALIFRRMQDE 467
Query: 331 SDRL 334
RL
Sbjct: 468 QARL 471
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IG+GGS I ++GA I++ S + +R ++ GT ++ +RA L+ ++
Sbjct: 406 GALIGRGGSNIKHMMEETGAEIRIQNSGDDVEEPLERDCVVRGTTEQQVRAHALIFRRMQ 465
Query: 107 TELH------AEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + +++D+ + + VP + G +IG+ GATI+ + +++ +
Sbjct: 466 DEQARLNIPPTDPRSNDL---FPVVMEVPAAKVGRVIGRGGATIRDIQQKTGVGVEVQQ 521
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 40/310 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G ++ I I G +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL--GAAEKAITIYGNPENCTN 246
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ E + + + LR++ N+ G IIGK G TIK M D+ I
Sbjct: 247 ACKKIMEVTQQEAYGLSKGE-----ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKIT 301
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ G++D +A +I KL + + Q++ P
Sbjct: 302 VSSINDINNFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHP 360
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVP---AVPHNTAAHYGPNMGGRKFQNNKDDRTNSL 259
+ AG+ +S YG P P P ++P G D +
Sbjct: 361 MAMMSTAGMGYSSRGPGLYGTGPAPYPYQTSLPTQQGIPIG-------------DTQETA 407
Query: 260 TIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIR 317
+ + + +G ++G G +I I + SGA +K++ ++ ++RKVTI G S
Sbjct: 408 FLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQW 467
Query: 318 TAESMIMQKV 327
A+ +I +K+
Sbjct: 468 KAQYLIFEKM 477
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 54/209 (25%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ + D NDR VT+ G+ + Q +
Sbjct: 409 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK 468
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ GF G
Sbjct: 469 AQYLIFEKMREE-------------------GFVG------------------------- 484
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF-SGT 302
+D ++ I V +G ++G+GG+N+ E+ +++G+ IK+S++ S
Sbjct: 485 -------GTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSAD 537
Query: 303 SERKVTISGPQRSIRTAESMIMQKVAYAS 331
E V I GP S+++A+ I V +S
Sbjct: 538 EEATVQIIGPFFSVQSAQRRIRAMVLQSS 566
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 21 APVKSLSSDPTEKPTYI------RFL-VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRS 73
AP +S PT++ I FL + N GA+IG GS I + SGA ++++
Sbjct: 384 APYPYQTSLPTQQGIPIGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPI 443
Query: 74 HEFFP--GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNS 131
+ P DR + I G+ + +A L+ +K+ E D + + ++VP++
Sbjct: 444 EQDKPVEQQNDRKVTIVGSPESQWKAQYLIFEKMREEGFVGGTED---VRLTIEILVPST 500
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKIS 158
G IIGK G ++ + ++IK+S
Sbjct: 501 QVGRIIGKGGQNVRELQRVTGSIIKLS 527
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 57/211 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++V + G+IIG+ G+TI+ ++A + + R D G ++ +T+ G +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDS--LGAAEKAITIYGNPENCTN 246
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + I+ ++++ Y G+ G +
Sbjct: 247 ACKKIM-EVTQQEAY-------------------GLSKGEI------------------- 267
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
SL I + IG ++G+GG I +I Q + +I VS D +
Sbjct: 268 --------------SLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNL 313
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ AESMI K+ +Y +D
Sbjct: 314 ERIITVKGSIDNMSKAESMISSKLRQSYEND 344
>gi|344250764|gb|EGW06868.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 151/308 (49%), Gaps = 50/308 (16%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++I K G ++ + +SGAR +S + +RII ++G + I +A ++IDKL
Sbjct: 7 GSIIAKKGESVKKMREESGARTSISDGN-----CPERIITLAGPTNAIFKAFAMIIDKLE 61
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDH 162
+ + ++ LRL+VP S CGS+IGK G IK + + A ++++ L +
Sbjct: 62 EGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 121
Query: 163 SYYGLNDRLVTLTG---TLDEQMRALELILLK-LSEDTL-YSQTMTVPY----TYAGVFF 213
S + +T+ G +L E ++ + +++L+ LS+ + + +T+ Y + + V F
Sbjct: 122 S----TEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHPKGLTITYRPKPSSSLVIF 177
Query: 214 SGFH-----GMPYGAVP--------------PPVPAVP-HNTA---AHYGPNMGGRKFQN 250
+G G + P PP+ H A +H+ G F
Sbjct: 178 AGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPLELTKLHQLALQQSHFPMTHGNTGFSA 237
Query: 251 NKD--DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
D +T S + ++++ IG ++GR G I EI Q+SGA+IK ++ G+++R+VT
Sbjct: 238 GLDASAQTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQIKTANP---VEGSTDRQVT 294
Query: 309 ISGPQRSI 316
I+G SI
Sbjct: 295 ITGSAASI 302
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T +SN L G +IG+ G+ IN+ + SGA+I+ + E G+TDR + I+
Sbjct: 240 DASAQTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVE---GSTDRQVTIT 296
Query: 89 GTIDEI 94
G+ I
Sbjct: 297 GSAASI 302
>gi|281341187|gb|EFB16771.1| hypothetical protein PANDA_007698 [Ailuropoda melanoleuca]
Length = 323
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 73/329 (22%)
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G T+ + +SGARI +S + +RI+ I+G D I +A ++ K ++
Sbjct: 6 GETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFKAFAMIAYKFEEDIINSM 60
Query: 114 QADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLND 169
+K LRL+VP S CGS+IGK G+ IK + + A ++++ L +S +
Sbjct: 61 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNS----TE 116
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSG---------- 215
R VT++GT D ++ ++ I + + E + T+PY V F+G
Sbjct: 117 RAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPASTPVIFAGGQVRADPLAA 174
Query: 216 --------------------------------FHGMPYGAVP-PPV----PAVPHNT--- 235
H + P PP+ PA P
Sbjct: 175 STANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 234
Query: 236 -AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD 294
++ N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++
Sbjct: 235 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 294
Query: 295 RGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ G+SER++TI+G +I A+ +I
Sbjct: 295 ATE---GSSERQITITGTPANISLAQYLI 320
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 57 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 114
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 115 TERAVTISGTPDAIIQCVKQICVVML 140
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 260 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 316
Query: 98 VDLV 101
L+
Sbjct: 317 QYLI 320
>gi|321258532|ref|XP_003193987.1| telomere length regulating RNA binding protein; Pbp2p [Cryptococcus
gattii WM276]
gi|317460457|gb|ADV22200.1| Telomere length regulating RNA binding protein, putative; Pbp2p
[Cryptococcus gattii WM276]
Length = 357
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 144/332 (43%), Gaps = 63/332 (18%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
TAP K DP + +R L+ A +IG+GG+ +N+ + +S AR+ +S E PG
Sbjct: 68 TAPAKP---DPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVS---ESIPG 121
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIG 138
+RI+ +SG +D + +A L++ ++ E D G++ ++ I+PNS GS+IG
Sbjct: 122 NPERILNVSGPLDAVAKAFGLIVRRINDEPF--DVPSVPGSRAVTIKFIIPNSRMGSVIG 179
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
K G+ IK + S A + S + G +R+++++G D
Sbjct: 180 KGGSKIKEIQEASGARLNAS--EAMLPGSTERVLSVSGVAD------------------- 218
Query: 199 SQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRT-- 256
+ + Y G + P N Y R+ Q+
Sbjct: 219 --AVHIAVYYIGTILLEYQDR-----------YPANATGSY------RQSQSRGPPPNSN 259
Query: 257 -------NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS-----E 304
+ I + + +G ++GRGG I EI S +I+V+D G G + E
Sbjct: 260 APPPPGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEE 319
Query: 305 RKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
R VTI+G +I A +++ +V +L++
Sbjct: 320 RLVTITGYPDNINAAVALLYSRVEAERAKLVE 351
>gi|389748653|gb|EIM89830.1| hypothetical protein STEHIDRAFT_118925 [Stereum hirsutum FP-91666
SS1]
Length = 304
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 145/312 (46%), Gaps = 46/312 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGK GS +N+ + +SGAR+ +S E PG +RI+ +SG +D + +
Sbjct: 1 MRCLIVTQDASIIIGKAGSHVNEIREKSGARVMVS---ESIPGNPERILNVSGPLDAVSK 57
Query: 97 AVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
A L++ ++ D+ DV G++ ++ ++PNS GS+IGK G+ IK D S
Sbjct: 58 AFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDAS 111
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI--LLKLSEDTLYSQTMTVPYTYA 209
A + S + G +R++++ G D A I +L +++ + S T +Y
Sbjct: 112 GARLNAS--EGMLPGSTERVLSVAGVADAIHIATYYIGNILIEAQERMPS-AGTAMSSYR 168
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQN------NKDDRTNSLTIGV 263
S PY + Y P Q N + + I +
Sbjct: 169 PSNRSTTRSTPY-------------VGSSYVPGYSNPYVQTAPPAPGNPPPQIQTQQIYI 215
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS--------ERKVTISGPQRS 315
++ +G ++G+GG I EI +S ++IK+ + G G + ER V I+GP +
Sbjct: 216 PNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAGAGGVNPAPAPGEGERLVVITGPPAN 275
Query: 316 IRTAESMIMQKV 327
I+ A ++ ++
Sbjct: 276 IQMAVQLLYHRL 287
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 58/223 (26%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P + I+F++ N G+VIGK GS I + Q SGAR L+ S PG+T+R++
Sbjct: 73 VPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGAR--LNASEGMLPGSTERVL 130
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK---------------------- 123
++G D I A I +L E A+++ GT
Sbjct: 131 SVAGVADAIHIAT-YYIGNILIE--AQERMPSAGTAMSSYRPSNRSTTRSTPYVGSSYVP 187
Query: 124 -----------------------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL 160
++ +PN G IIGK G+ I S + IKI
Sbjct: 188 GYSNPYVQTAPPAPGNPPPQIQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEP 247
Query: 161 DHSYYGLN--------DRLVTLTGTLDEQMRALELILLKLSED 195
G+N +RLV +TG A++L+ +L ++
Sbjct: 248 GAGAGGVNPAPAPGEGERLVVITGPPANIQMAVQLLYHRLEQE 290
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR--------SHEFFPGTTDRIIMISG 89
+ + N L G +IGKGGS IN+ + S ++I++ + PG +R+++I+G
Sbjct: 212 QIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAGAGGVNPAPAPGEGERLVVITG 271
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADD 117
I AV L+ +L E + +A
Sbjct: 272 PPANIQMAVQLLYHRLEQEKQKQLRAQQ 299
>gi|167516250|ref|XP_001742466.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779090|gb|EDQ92704.1| predicted protein [Monosiga brevicollis MX1]
Length = 319
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 25/216 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ AG VIG+GG I+ Q ++G ++LS++ EF+PGT +R +I G ++
Sbjct: 14 IKLLIPAKCAGGVIGRGGENISKLQEETGLHVKLSQTREFYPGTAERTCLIQGEPTRLIV 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
V+ V+D ++ +D D + + VP ++ GS++GK G+ +K D + I
Sbjct: 74 GVNRVLDIIVAN---DDHQDGTSLANPVTVAVPYNAAGSVLGKGGSILKGIKDATGCKII 130
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQM------RALELILLKLSEDTLYSQTMTVPYTYAG 210
IS+ D +RL+ + ++ R ++ +L + E+ L +++ Y+
Sbjct: 131 ISQKDGPAARYGERLIKIVSPTPLEVPREGVKRVMDALLAQ--EENLQFHNLSISYSTME 188
Query: 211 VFFSGFHGMPYGAVPPPVP--AVPHNTAAHYGPNMG 244
F G PPPV VP AA Y P G
Sbjct: 189 PRFGG---------PPPVQNYGVP---AATYEPGRG 212
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG-PQRSI 316
G V+GRGG NI ++ + +G +K+S +F+ GT+ER I G P R I
Sbjct: 24 GGVIGRGGENISKLQEETGLHVKLSQTREFYPGTAERTCLIQGEPTRLI 72
>gi|76154163|gb|AAX25658.2| SJCHGC08372 protein [Schistosoma japonicum]
Length = 160
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ P + + + LV + AGA+IGKGG I + Q+Q+ A++++S+++ F+PGTT+R+
Sbjct: 34 LTLKPAKGNVHFKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVC 93
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVG-----TKTKLRLIVPNSSCGSIIGKA 140
+I GT + ILR + +K+ + + + G +++++VPNS+ G IIGK
Sbjct: 94 LIVGTTESILRVFQYISEKVYEKPESIAKTGCEGRIPTERHKQVKILVPNSTAGMIIGKG 153
Query: 141 GATIKSF 147
G+ IK
Sbjct: 154 GSFIKEL 160
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+++VP+ + G+IIGK G I + + A +K+S+ + Y G +R+ + GT + +R
Sbjct: 45 FKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIVGTTESILR 104
Query: 184 ALELILLKLSE 194
+ I K+ E
Sbjct: 105 VFQYISEKVYE 115
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I EI + A++K+S F+ GT+ER I G SI I +KV
Sbjct: 55 GAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIVGTTESILRVFQYISEKV 113
>gi|345564609|gb|EGX47569.1| hypothetical protein AOL_s00083g77 [Arthrobotrys oligospora ATCC
24927]
Length = 459
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 150/367 (40%), Gaps = 79/367 (21%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+++ A VIGKGG + + S A+ +S E+ G +RI+ +SG +D +
Sbjct: 104 HVRALITSAEAATVIGKGGENVTQIRRLSEAKCTVS---EYTRGAVERILTVSGGVDAVA 160
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I + +E A +KT LRL++P+ GSIIGK G I+ D S A
Sbjct: 161 KAFGLIIRTINSE--PLSSASTQNSKTFPLRLLIPHILIGSIIGKGGMRIREIQDASGAR 218
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED----------TLYSQ---- 200
+ S D +R + + G D A + L E + Y+
Sbjct: 219 LNAS--DSCLPLSTERSLMVVGVADAVHIATYYVATTLVEQLTERFGGPAASAYASRSGG 276
Query: 201 --------TMTVPYTYAGVFFSGFH-------------------GMPYGAVPPPV----- 228
VPYT F + H G+PY PPV
Sbjct: 277 PAGAVPGGMQVVPYTPQPAFGNYGHPDNYRRHNNQAQRTPANPYGIPYLHGQPPVQQPAA 336
Query: 229 --------------------PAVPHNTAAHYGPNMGGR-KFQNNKDDRTNSLTIGVADEH 267
P VPH+ AH GP G + I + ++
Sbjct: 337 PIHYADPSAQPAYSGAGPHQPTVPHH-GAHTGPAAQGHGNMAAMIPGAPLTQQIYIPNDM 395
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+GG I EI Q+SG+ IK+++ D ++ER VTI+G Q + A M+ ++
Sbjct: 396 VGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTQECNQMALYMLYSRL 452
Query: 328 AYASDRL 334
R+
Sbjct: 453 ESEKHRI 459
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 384 PLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTQEC 440
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 441 NQMALYMLYSRLESEKH 457
>gi|406607447|emb|CCH41238.1| Insulin-like growth factor 2 mRNA-binding protein 2
[Wickerhamomyces ciferrii]
Length = 329
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 139/311 (44%), Gaps = 45/311 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG VIGK GS I D + Q+G + +SR G DRI+ ++G +D +A
Sbjct: 39 RILVSVKEAGIVIGKNGSVIADIRDQTGVKAGVSR---VVQGCPDRILTVTGPLDSTAQA 95
Query: 98 VDLVIDKLLTELHAEDQADDVGTK----------TKLRLIVPNSSCGSIIGKAGATIKSF 147
+ ++ L T E K T LRL++PN+ G+IIG+ GA IK+
Sbjct: 96 LGMIAKALATSPLDETIFQYFPLKRLLPPGEEGSTSLRLLIPNAQMGTIIGRQGARIKTL 155
Query: 148 MDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++ + S+ L +S +RLV L G ++ A ++I L ED
Sbjct: 156 QENYDVRLVASKDFLQNS----TERLVELQGLPEKIEIASKIIARCLIEDW--------- 202
Query: 206 YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN---SLTIG 262
++ AG F P P +P + + N + +N S T+
Sbjct: 203 HSAAGTSFY-----------LPTPRIPRRSNHNNNHTTYNNHQNNGSNHSSNSEISKTVN 251
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
+ +G ++G+ G I EI ++SGA+I ++ D +ER T+ G +S+ A S
Sbjct: 252 FPSQFVGCLIGKAGSRIQEIRKVSGAQITIASEDD---DNNERSFTLVGSNKSVDKALSF 308
Query: 323 IMQKVAYASDR 333
+ Q + +R
Sbjct: 309 LQQNLEKEKER 319
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 36/205 (17%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P+K L E T +R L+ N G +IG+ G+ I Q R L S +F +T
Sbjct: 117 PLKRLLPPGEEGSTSLRLLIPNAQMGTIIGRQGARIKTLQENYDVR--LVASKDFLQNST 174
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHA-----------------------------E 112
+R++ + G ++I A ++ L+ + H+ +
Sbjct: 175 ERLVELQGLPEKIEIASKIIARCLIEDWHSAAGTSFYLPTPRIPRRSNHNNNHTTYNNHQ 234
Query: 113 DQADDVGTKTKLRLIV--PNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDR 170
+ + + +++ V P+ G +IGKAG+ I+ S A I I+ D N+R
Sbjct: 235 NNGSNHSSNSEISKTVNFPSQFVGCLIGKAGSRIQEIRKVSGAQITIASEDDDN---NER 291
Query: 171 LVTLTGTLDEQMRALELILLKLSED 195
TL G+ +AL + L ++
Sbjct: 292 SFTLVGSNKSVDKALSFLQQNLEKE 316
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 21/306 (6%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
PT+ P +R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G
Sbjct: 136 PTDFP--LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNV--GSLEKAITIYG 191
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
D A +++ + E + ++ + L+++ N+ G IIGK G TIK M
Sbjct: 192 NPDNCTNACKRILEVMQQEANNTNKGE-----ICLKILAHNNLIGRIIGKGGNTIKRIMQ 246
Query: 150 DSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
++ I +S + D + + L +R++T+ GT++ +A I KL + + P +
Sbjct: 247 ETDTKITVSSINDINSFNL-ERIITVKGTIENMAKAESQISAKLRQSYENDLQVLAPQS- 304
Query: 209 AGVFFSGFHGMPYGAVPPPVP-AVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
+ F G H M + A P Y P G Q D + + + +
Sbjct: 305 --IMFPGLHPMAMMSTGRGFCGAPPPFPPPIYAPLAGQGGAQQGAGDSQETTYLYIPNNA 362
Query: 268 IGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGT----SERKVTISGPQRSIRTAES 321
+G ++G G +I I + S A +K++ ++ G+ ERKVTI G + A+
Sbjct: 363 VGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKVIEGSVAAQQERKVTIVGSPEAQWKAQY 422
Query: 322 MIMQKV 327
+I +K+
Sbjct: 423 LIFEKM 428
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 57/176 (32%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH------SYYGLNDRLVTLTGTLD 179
L +PN++ G+IIG G+ I++ + S A +KI+ L+ S +R VT+ G+ +
Sbjct: 356 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKVIEGSVAAQQERKVTIVGSPE 415
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
Q +A LI K+ E+ F SG
Sbjct: 416 AQWKAQYLIFEKMREEG---------------FMSG------------------------ 436
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
DD ++ I VA +G ++G+GG+N+ E+ +++G+ IK+ ++
Sbjct: 437 ------------SDDVRLTVAIVVASSQVGRIIGKGGQNVRELQRVTGSLIKLPEQ 480
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 57/211 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+V + G+IIG+ G+TI+ S+A + + R D+ G ++ +T+ G D
Sbjct: 141 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDN--VGSLEKAITIYGNPDNCTN 198
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + IL + ++
Sbjct: 199 ACKRILEVMQQEA----------------------------------------------- 211
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN + L I + IG ++G+GG I I Q + +I VS D S
Sbjct: 212 ------NNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNL 265
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ AES I K+ +Y +D
Sbjct: 266 ERIITVKGTIENMAKAESQISAKLRQSYEND 296
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTT----DRI 84
+++ TY+ + N GA+IG GS I + S A ++++ + G+ +R
Sbjct: 350 SQETTYL--YIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKVIEGSVAAQQERK 407
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+ I G+ + +A L+ +K+ E +DDV + + ++V +S G IIGK G +
Sbjct: 408 VTIVGSPEAQWKAQYLIFEKMREEGFMSG-SDDV--RLTVAIVVASSQVGRIIGKGGQNV 464
Query: 145 KSFMDDSQAVIKI 157
+ + ++IK+
Sbjct: 465 RELQRVTGSLIKL 477
>gi|47220208|emb|CAF98973.1| unnamed protein product [Tetraodon nigroviridis]
Length = 345
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 52/327 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDTIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK---TKLRLIVPNSSCGSIIGKAGATIKSFMD-DSQ 152
A ++ K ++ ++ + T LRL+VP S CGS+IGK G+ IK + +
Sbjct: 73 AFAMIAYKFEEDI-INSMSNSLATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMREAELL 131
Query: 153 AVIKISRLDHSYYGLNDRLVTLT----GTLDE--------------QMRALELILLKLSE 194
VIK ++ + + VT + T+ Q+RA + +
Sbjct: 132 CVIKEGISSDIFFCMCVKSVTASPPKGATIPYRPKPASTPVIFSGGQVRAEPALQHRCYF 191
Query: 195 DTLYS---QTMTVPYTYAGVF-------FSGFHGM--------PYGAVPPPVPAVPHNTA 236
T+ + + ++ YT G + + H + P G P PA T+
Sbjct: 192 HTVNANENRPVSSAYTIQGPYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPAFLSQTS 251
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
+ T+ LTI ++ IG ++GR G I EI Q+SGA+IK+++
Sbjct: 252 FLVA-FVSDPGLDATPPASTHELTI--PNDLIGCIIGRQGTKINEIRQMSGAQIKIANA- 307
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 308 --MEGSSERQITITGTPANISLAQYLI 332
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A L
Sbjct: 275 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSERQITITGTPANISLAQYL 331
Query: 101 VIDKLLTEL 109
+ +L +E+
Sbjct: 332 INARLTSEV 340
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 25 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDTIFKAFAMIAY 79
Query: 326 K 326
K
Sbjct: 80 K 80
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 56/333 (16%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++++ A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVS---DYQKGAVERILTVSGVVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E E +D LRL++P+ GSIIGK G IK + S A +
Sbjct: 184 KAFGLIIRTLNNE-PLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARL 242
Query: 156 KISRLDHSYYGLN-DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
S SY L+ +R + + G D A+ + + TL+ Q A ++
Sbjct: 243 NAS---DSYLPLSTERSLVVLGVAD----AVHIATYYVG-STLFEQLTERFGGPAASAYA 294
Query: 215 GFHGMPYGAVPPPVP------------AVP-HNTAAHYGPNMG----------------- 244
G P G VP +P +P H T H P +G
Sbjct: 295 SRSGGPAGVVPGAMPNHTVKDRHLTNSQLPLHITGGHASPAVGGYGGVGPQQPQQAGHAV 354
Query: 245 ----------GRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD 294
G+ + + I + ++ +G ++G+GG I EI Q+SG+ IK+++
Sbjct: 355 PQPHGATGPQGQPMPGAIPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINE 414
Query: 295 RGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
D ++ER VTI+G + A M+ ++
Sbjct: 415 PQD---NSNERLVTITGTAECNQMALYMLYSRL 444
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGKGG I + Q SGAR+ S S
Sbjct: 190 IRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARLNASDS-- 247
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
+ P +T+R +++ G D + A V L +L
Sbjct: 248 YLPLSTERSLVVLGVADAVHIATYYVGSTLFEQL 281
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 380 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNS----NERLVTITGTAECNQM 435
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 436 ALYMLYSRLESE 447
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 375 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTAE 431
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 432 CNQMALYMLYSRLESERH 449
>gi|336367212|gb|EGN95557.1| hypothetical protein SERLA73DRAFT_186638 [Serpula lacrymans var.
lacrymans S7.3]
Length = 370
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 42/310 (13%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IGKGGS +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 69 HMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVS---ESIPGNPERILNVSGPLDAVS 125
Query: 96 RAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+A L++ ++ D+ DV G++ ++ ++PNS GS+IGK G+ IK D
Sbjct: 126 KAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDA 179
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA---LELILLKLSEDTLYSQTMTVPYT 207
S A + S + G +R++++ G D A + IL++ E S + +
Sbjct: 180 SGARLNAS--EGMLPGSTERVLSVAGVADAIHIATYYIGNILIEAQERMPSSSHSSYRPS 237
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
+ + G Y VP + P G +N + + I + ++
Sbjct: 238 SNPSRRAPYQGSSY--VP-----------GYSQPFGSGPPPPHNPPQQLQTQQIYIPNDL 284
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDF----------FSGTSERKVTISGPQRSIR 317
+G ++G+GG I EI +S ++IK+ + G G ER V I+G +I+
Sbjct: 285 VGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMNGAPAPTGGEGERLVVITGQPANIQ 344
Query: 318 TAESMIMQKV 327
A ++ ++
Sbjct: 345 MAVQLLYHRL 354
>gi|353237678|emb|CCA69645.1| related to PBP2-PAB1 binding protein [Piriformospora indica DSM
11827]
Length = 406
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 154/352 (43%), Gaps = 60/352 (17%)
Query: 10 PSPDV-HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARI 68
P P V +G++S++ + ++ P ++R L+ A +IGKGGS +N+ + +S A++
Sbjct: 84 PEPAVENGQKSSS---NAATAPPASTIHMRCLIVTQDASIIIGKGGSHVNEIREKSNAKV 140
Query: 69 QLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIV 128
+S E PG +RI+ +SG +D + +A L++ ++ E ++ I+
Sbjct: 141 MVS---ESIPGNPERILNVSGALDAVSKAFGLIVRRINDEPMGPSVPGS--RAVTIKFII 195
Query: 129 PNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA---L 185
P+S GS+IGK GA IK + S A + S + G +R++++TG D A +
Sbjct: 196 PHSRMGSVIGKGGAKIKEIQEASGARLNAS--EGMLPGSTERILSVTGVADAIHIATYYI 253
Query: 186 ELILLKLSE-----DTLYSQTMTVPYTYAGVFFSGFHGMPY-------GAVPPPVPAVPH 233
IL++ E Y Q+ P + G G Y +P VP+ P
Sbjct: 254 GNILIQQQEAHGAVGLSYRQSRP-PRAFNETMGGGAPGQQYFPGQYQSPMMPAAVPSGPL 312
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
T Y PN + +G ++G+GG I EI Q S ++IK+
Sbjct: 313 QTQQIYIPN-----------------------DLVGCIIGKGGAKINEIRQTSQSQIKIM 349
Query: 294 DRGDFFS----------GTSERKVTISGPQRSIRTAESMIMQKVAYASDRLM 335
+ G ER V I+G +I+ A M+ ++ + M
Sbjct: 350 EPGAVGVGVGGQQAGPPNEGERLVVITGQPHNIQMAVGMLYHRLEEEKRKQM 401
>gi|291575150|ref|NP_065151.2| poly(rC)-binding protein 4 isoform a [Homo sapiens]
gi|114587204|ref|XP_001170813.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan troglodytes]
gi|16877720|gb|AAH17098.1| PCBP4 protein [Homo sapiens]
gi|119585570|gb|EAW65166.1| poly(rC) binding protein 4, isoform CRA_b [Homo sapiens]
Length = 360
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 125/289 (43%), Gaps = 48/289 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRESPPKG 134
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
I H L L++ Q + + ++++ S
Sbjct: 135 ATIPY--HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSS-------------- 178
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
H +P+ A P VP + + +T+S V ++ IG V+GR
Sbjct: 179 --HAVPF-ATPSVVPGL-------------------DPGTQTSSQEFLVPNDLIGCVIGR 216
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 217 QGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 262
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|426340777|ref|XP_004034304.1| PREDICTED: poly(rC)-binding protein 4 isoform 4 [Gorilla gorilla
gorilla]
Length = 360
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 125/289 (43%), Gaps = 48/289 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRESPPKG 134
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
I H L L++ Q + + ++++ S
Sbjct: 135 ATIPY--HPSLSLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSS-------------- 178
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
H +P+ A P VP + + +T+S V ++ IG V+GR
Sbjct: 179 --HAVPF-ATPSVVPGL-------------------DPGTQTSSQEFLVPNDLIGCVIGR 216
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 217 QGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 262
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|410951301|ref|XP_003982336.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Felis catus]
Length = 360
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 48/289 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRESPPKG 134
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
I H L L++ Q + + +E T Q S
Sbjct: 135 ATIPY--HPSLSLGTVLLSANQGFSVQG---QYGAVTPAEVTKLQQ------------LS 177
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
G H +P+ A P VP + + +T+S V ++ IG V+GR
Sbjct: 178 G-HAVPF-ASPSMVPGL-------------------DPGTQTSSQEFLVPNDLIGCVIGR 216
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 217 QGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 262
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|344300282|gb|EGW30622.1| hypothetical protein SPAPADRAFT_63451 [Spathaspora passalidarum
NRRL Y-27907]
Length = 374
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 140/314 (44%), Gaps = 47/314 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IG+ G I+ + ++ + +SR PG+ +RI+ +SG +D +
Sbjct: 83 VRVLVSAKEAGCLIGQNGKVIDGIRDETNTKAGISR---LQPGSHERILTVSGKLDNCAK 139
Query: 97 AVDLVIDKL------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
A+ L L +L A ++ T LRL+VPN+ G++IG G I
Sbjct: 140 ALSYFAQALCDSTIETYNYFPLKQLSANPCIEN--ETTILRLLVPNAQMGTLIGSKGLRI 197
Query: 145 KSFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSED--TLYSQ 200
+ Q+ IS + + G N+RLV L GT+++ AL +I L ED L +
Sbjct: 198 QQI----QSNYHISMIASKSFLPGSNERLVELQGTVNDLYDALRIIARCLIEDISALGNT 253
Query: 201 TMTVPYTYAGVFFSGFHGM-PYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSL 259
VP + S ++G+ V P GR F K +
Sbjct: 254 NYYVPRGH----HSQYNGVNTTNGVSSTTPT-------------NGRNFA-RKSSHIATT 295
Query: 260 TIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTA 319
++ ++ +G ++G+ G I + ++SGA I +S+ G +ER TISG ++ A
Sbjct: 296 SLSFPNDIVGALIGKNGSRIQGVRKVSGATIGISEE---VEGKNERIFTISGSPHAVEKA 352
Query: 320 ESMIMQKVAYASDR 333
+ ++ + R
Sbjct: 353 KGLLYHNLQREEQR 366
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 40/191 (20%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LS++P + T +R LV N G +IG G I Q QS I + S F PG
Sbjct: 160 PLKQLSANPCIENETTILRLLVPNAQMGTLIGSKGLRIQ--QIQSNYHISMIASKSFLPG 217
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHA------------EDQADDVGTKTKL--- 124
+ +R++ + GT++++ A+ ++ L+ ++ A Q + V T +
Sbjct: 218 SNERLVELQGTVNDLYDALRIIARCLIEDISALGNTNYYVPRGHHSQYNGVNTTNGVSST 277
Query: 125 ------------------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
L PN G++IGK G+ I+ S A I IS G
Sbjct: 278 TPTNGRNFARKSSHIATTSLSFPNDIVGALIGKNGSRIQGVRKVSGATIGIS---EEVEG 334
Query: 167 LNDRLVTLTGT 177
N+R+ T++G+
Sbjct: 335 KNERIFTISGS 345
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 43 NPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVI 102
N + GA+IGK GS I + SGA I +S E G +RI ISG+ + +A L+
Sbjct: 301 NDIVGALIGKNGSRIQGVRKVSGATIGIS---EEVEGKNERIFTISGSPHAVEKAKGLLY 357
Query: 103 DKLLTELHAEDQAD 116
L E +A+
Sbjct: 358 HNLQREEQRRAEAE 371
>gi|335299140|ref|XP_003358506.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Sus scrofa]
Length = 360
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 48/289 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRESPPKG 134
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
I H L L++ Q + + +E T Q S
Sbjct: 135 ATIPY--HPSLSLGTVLLSTNQGFSVQG---QYGAVTPAEVTKLQQ------------LS 177
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
G H +P+ A P VP + + +T+S V ++ IG V+GR
Sbjct: 178 G-HAVPF-ASPSMVPGL-------------------DPGTQTSSQEFLVPNDLIGCVIGR 216
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 217 QGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 262
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|301767224|ref|XP_002919001.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
Length = 360
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 48/289 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRESPPKG 134
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
I H L L++ Q + + +E T Q S
Sbjct: 135 ATIPY--HPSLSLGTVLLSANQGFSVQG---QYGAVTPAEVTKLQQ------------LS 177
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
G H +P+ A P VP + + +T+S V ++ IG V+GR
Sbjct: 178 G-HAVPF-ASPSMVPGL-------------------DPGAQTSSQEFLVPNDLIGCVIGR 216
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 217 QGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 262
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|336379931|gb|EGO21085.1| hypothetical protein SERLADRAFT_398361 [Serpula lacrymans var.
lacrymans S7.9]
Length = 304
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 42/310 (13%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IGKGGS +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 3 HMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVS---ESIPGNPERILNVSGPLDAVS 59
Query: 96 RAVDLVIDKLLTELHAEDQADDV----GTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+A L++ ++ D+ DV G++ ++ ++PNS GS+IGK G+ IK D
Sbjct: 60 KAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDA 113
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA---LELILLKLSEDTLYSQTMTVPYT 207
S A + S + G +R++++ G D A + IL++ E S + +
Sbjct: 114 SGARLNAS--EGMLPGSTERVLSVAGVADAIHIATYYIGNILIEAQERMPSSSHSSYRPS 171
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
+ + G Y VP + P G +N + + I + ++
Sbjct: 172 SNPSRRAPYQGSSY--VP-----------GYSQPFGSGPPPPHNPPQQLQTQQIYIPNDL 218
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDF----------FSGTSERKVTISGPQRSIR 317
+G ++G+GG I EI +S ++IK+ + G G ER V I+G +I+
Sbjct: 219 VGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMNGAPAPTGGEGERLVVITGQPANIQ 278
Query: 318 TAESMIMQKV 327
A ++ ++
Sbjct: 279 MAVQLLYHRL 288
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 85/219 (38%), Gaps = 52/219 (23%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P + I+F++ N G+VIGK GS I + Q SGAR L+ S PG+T+R++
Sbjct: 76 VPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGAR--LNASEGMLPGSTERVL 133
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAE------------------------------DQA 115
++G D I A I +L E Q
Sbjct: 134 SVAGVADAIHIAT-YYIGNILIEAQERMPSSSHSSYRPSSNPSRRAPYQGSSYVPGYSQP 192
Query: 116 DDVGTKTKL---------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
G ++ +PN G IIGK G+ I S + IKI G
Sbjct: 193 FGSGPPPPHNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVG 252
Query: 167 LN----------DRLVTLTGTLDEQMRALELILLKLSED 195
+N +RLV +TG A++L+ +L ++
Sbjct: 253 MNGAPAPTGGEGERLVVITGQPANIQMAVQLLYHRLEQE 291
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT----------DRIIMI 87
+ + N L G +IGKGGS IN+ + S ++I++ G +R+++I
Sbjct: 211 QIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMNGAPAPTGGEGERLVVI 270
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQAD 116
+G I AV L+ +L E + +A
Sbjct: 271 TGQPANIQMAVQLLYHRLEQEKQKQLRAQ 299
>gi|338714774|ref|XP_003363150.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Equus
caballus]
Length = 360
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 48/289 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRESPPKG 134
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
I H L L++ Q + + +E T Q S
Sbjct: 135 ATIPY--HPSLSLGTVLLSANQGFSVQG---QYGAVTSAEVTKLQQ------------LS 177
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
G H +P+ A P VP + + +T+S V ++ IG V+GR
Sbjct: 178 G-HAVPF-ASPSMVPGL-------------------DPGAQTSSQEFLVPNDLIGCVIGR 216
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 217 QGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 262
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|448081636|ref|XP_004194937.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
gi|359376359|emb|CCE86941.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
Length = 362
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 143/319 (44%), Gaps = 66/319 (20%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS +G +IG+ G+ I+ ++++ + +S+ PG+ +RI+ +SGT+D +A
Sbjct: 77 RVLVSAKESGCLIGQNGAVIDSIRAETNTKAGISK---LQPGSHERILTVSGTLDNSAKA 133
Query: 98 VDLVIDKL---------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
+ L L +L D+ T LRL++PN+ G++IG G
Sbjct: 134 LSYFAQALCNARVANTLNYNYFPLKQLSPVPCIDE--ETTILRLLIPNAQMGTLIGSKGI 191
Query: 143 TIKSFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
I+ Q++ IS + + G N+RLV L GT+D AL +I L ED
Sbjct: 192 RIQQI----QSMYNISMIASKAFLQGSNERLVELQGTVDNLYDALRVISRCLIED----- 242
Query: 201 TMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGG---------RKFQNN 251
FS G Y VP ++A+ G N+ G + N
Sbjct: 243 ------------FSSIVGTNY--------YVPKGSSANNG-NLNGPTRRDSSGSSRRYGN 281
Query: 252 KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
T +LT ++ +G ++G+ G I + +ISGA I +S+ S+R TI+G
Sbjct: 282 LSVSTTTLTF--PNDVVGALIGKNGSRIQGVRKISGATITISNE---VENQSDRVFTITG 336
Query: 312 PQRSIRTAESMIMQKVAYA 330
P +I A+S++ + A
Sbjct: 337 PSHAIEKAKSLLYHNLQRA 355
>gi|281341834|gb|EFB17418.1| hypothetical protein PANDA_012445 [Ailuropoda melanoleuca]
Length = 320
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 144/329 (43%), Gaps = 73/329 (22%)
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G ++ + +SGARI +S + +RII ++G + I +A ++IDKL ++ +
Sbjct: 3 GESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFKAFAMIIDKLEEDISSSM 57
Query: 114 QADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMD-DSQAVIKISRLDHSYYGLNDR 170
++ LRL+VP S CGS+IGK G IK + +Q + L +S +R
Sbjct: 58 TNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIREVGAQVQVAGDMLPNS----TER 113
Query: 171 LVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSG----------- 215
+T+ G + ++ I + + E + +T+PY + + V F+G
Sbjct: 114 AITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDS 171
Query: 216 ---------------FHGMPYG--------AVPPPVPAVPHNTA---AHY---------- 239
G P A+P P H A +H+
Sbjct: 172 ASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 231
Query: 240 -----GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD 294
P + G + +T S + + ++ IG ++GR G I EI Q+SGA+IK+++
Sbjct: 232 GIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 291
Query: 295 RGDFFSGTSERKVTISGPQRSIRTAESMI 323
G+++R+VTI+G SI A+ +I
Sbjct: 292 P---VEGSTDRQVTITGSAASISLAQYLI 317
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 305 GSAASISLAQYLI 317
>gi|399218143|emb|CCF75030.1| unnamed protein product [Babesia microti strain RI]
Length = 363
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 53/283 (18%)
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH------AEDQA------ 115
++LS + FFP T DRI+ ISG+ + +A+ L+IDK+ H AE +
Sbjct: 1 MKLSSTTTFFPNTQDRILTISGSEQSVCKAILLIIDKICLPYHSVHSRIAECEETLHFLD 60
Query: 116 DDVGTK----TK----LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL 167
D + T+ TK ++LIVP SS SIIGK G+ I++ D I + + G
Sbjct: 61 DSMNTRYNKATKSDISVKLIVPKSSISSIIGKGGSRIRTIQDTLNCRIHVY---NRASGT 117
Query: 168 NDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPP 227
++R+V G LD +A+ ++L DT + +V Y
Sbjct: 118 SERIVVSIGELDSLKKAVIALVLIFQNDTNLKEYASVTY--------------------- 156
Query: 228 VPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSL---TIGVADEHIGFVVGRGGRNIMEISQ 284
P+ P N+ H+ + NK + TN++ +I + + + V+G G ++ ++
Sbjct: 157 -PSTP-NSYKHHTTYIDIV----NKLELTNTICKISINIPEASVSSVIGPNGSSLDQVIG 210
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G +IK+ + SG++ RKVT++G ++ A ++I+ K+
Sbjct: 211 ATGTQIKIFPKDPTTSGSNYRKVTLTGSVAAVHIAHALILMKI 253
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T+ ++ +V ++IGKGGS I Q RI + + GT++RI++ G
Sbjct: 71 TKSDISVKLIVPKSSISSIIGKGGSRIRTIQDTLNCRIHV---YNRASGTSERIVVSIGE 127
Query: 91 IDEILRAVDLVI-----DKLLTEL-------------HAEDQADDV------GTKTKLRL 126
+D + +AV ++ D L E H D V T K+ +
Sbjct: 128 LDSLKKAVIALVLIFQNDTNLKEYASVTYPSTPNSYKHHTTYIDIVNKLELTNTICKISI 187
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
+P +S S+IG G+++ + + IKI D + G N R VTLTG++ A
Sbjct: 188 NIPEASVSSVIGPNGSSLDQVIGATGTQIKIFPKDPTTSGSNYRKVTLTGSVAAVHIAHA 247
Query: 187 LILLKL 192
LIL+K+
Sbjct: 248 LILMKI 253
>gi|348581995|ref|XP_003476762.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Cavia porcellus]
Length = 360
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 126/289 (43%), Gaps = 48/289 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRESPPKG 134
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
I H L L++ Q + + +E T Q S
Sbjct: 135 ATIPY--HPSLSLGTVLLSANQGFSVQG---QYGAVTPAEVTKLQQ------------LS 177
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
G H +P+ A P VP + + +T+S V ++ IG V+GR
Sbjct: 178 G-HAVPF-ASPSVVPGL-------------------DPAAQTSSQEFLVPNDLIGCVIGR 216
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA IK+ ++ + G ER +TI+G SI A+ +I
Sbjct: 217 QGSKISEIRQMSGAHIKIGNQAE---GAGERHITITGSPVSIALAQYLI 262
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R I I+
Sbjct: 193 DPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHITIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 142/320 (44%), Gaps = 26/320 (8%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP L + +R LV + + GA+IG+ GSTI Q+ AR+ + R G+
Sbjct: 116 APFGGLPGQSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNV--GS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQ--ADDVGTKTKLRLIVPNSSCGSIIG 138
++ I I G + A +++ + E + ++ A + L+++ N+ G IIG
Sbjct: 174 LEKAITIYGNPENCTNACKRILEVMQQEANNTNKGYAKKYYYEICLKILAHNNLIGRIIG 233
Query: 139 KAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
K G TIK M ++ I +S + D + + L +R++T+ G +D RA I KL +
Sbjct: 234 KGGNTIKRIMQETDTKITVSSINDINSFNL-ERIITVKGAIDNMSRAEAQISAKLRQSYE 292
Query: 198 YSQTMTVPYTYAGVFFSGFH--------GMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQ 249
P T + F G H G+ YG+ P+ G GG
Sbjct: 293 NDLQAMAPQT---MMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQGG---- 345
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKV 307
D + + + + +G ++G G +I I + SGA +K++ D +ER+V
Sbjct: 346 ---GDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRV 402
Query: 308 TISGPQRSIRTAESMIMQKV 327
TI G + A+ +I +K+
Sbjct: 403 TIVGSPEAQWKAQYLIFEKM 422
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 131/335 (39%), Gaps = 100/335 (29%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGKGG+TI ++ +I +S ++ +RII + G ID + R
Sbjct: 219 LKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGAIDNMSR 278
Query: 97 AVDLVIDKLLTELHAEDQA-------------------DDVG------------------ 119
A + KL + QA +G
Sbjct: 279 AEAQISAKLRQSYENDLQAMAPQTMMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYP 338
Query: 120 ---------TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS--YYGLN 168
++ L +PN++ G+IIG G+ I++ + S A +KI+ +D + N
Sbjct: 339 AGAAQGGGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQN 398
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPV 228
+R VT+ G+ + Q +A LI K+ E+
Sbjct: 399 ERRVTIVGSPEAQWKAQYLIFEKMREE--------------------------------- 425
Query: 229 PAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
F DD ++ I V +G ++G+GG+N+ E+ +++G+
Sbjct: 426 ------------------GFVAGSDDVRLTVEIMVPSSQVGRIIGKGGQNVRELQRVTGS 467
Query: 289 RIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
IK+ ++G E V I GP S+++A+ I
Sbjct: 468 VIKLPEQGA-SPQEDETTVHIIGPFFSVQSAQRRI 501
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT--DRIIMIS 88
+++ TY+ + N GA+IG GS I + SGA ++++ E P T +R + I
Sbjct: 348 SQETTYL--YIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIV 405
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G+ + +A L+ +K+ E +DDV + + ++VP+S G IIGK G ++
Sbjct: 406 GSPEAQWKAQYLIFEKMREEGFVAG-SDDV--RLTVEIMVPSSQVGRIIGKGGQNVRELQ 462
Query: 149 DDSQAVIKI 157
+ +VIK+
Sbjct: 463 RVTGSVIKL 471
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 50/211 (23%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++V + G+IIG+ G+TI+ ++A + + R D+ G ++ +T+ G +
Sbjct: 132 LRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDN--VGSLEKAITIYGNPENCTN 189
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + IL + ++ +NT Y
Sbjct: 190 ACKRILEVMQQEA------------------------------------NNTNKGYA--- 210
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
K L I + IG ++G+GG I I Q + +I VS D S
Sbjct: 211 -------KKYYYEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNL 263
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G ++ AE+ I K+ +Y +D
Sbjct: 264 ERIITVKGAIDNMSRAEAQISAKLRQSYEND 294
>gi|70949112|ref|XP_743997.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56523758|emb|CAH77309.1| hypothetical protein PC000132.02.0 [Plasmodium chabaudi chabaudi]
Length = 234
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 92/154 (59%), Gaps = 9/154 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T + +++ L++N +AG++IGK GS I+ ++++G ++LS ++ +FP T R+++I G
Sbjct: 15 TSQLCFVKMLINNLVAGSIIGKNGSIISGIENKTGCSLKLSPNNSYFPNTQKRVLVICGK 74
Query: 91 IDEILRAVDLVIDKLL-----TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+EI + +++DK+ +H + T T R++VP S+ +IIGK G IK
Sbjct: 75 QEEINNVIIIILDKIRQISIPNNMHVNKNENKTQTYT-CRVVVPKSAVSAIIGKGGHQIK 133
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+++ I+IS + GLN+R++++ G+ D
Sbjct: 134 QLQNNTGTKIQISNRED---GLNERIISIVGSFD 164
>gi|390597786|gb|EIN07185.1| hypothetical protein PUNSTDRAFT_53562 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 356
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 148/316 (46%), Gaps = 54/316 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IGKGG+ +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 55 HMRCLIVTQDASIIIGKGGAHVNEIRQKSGARVVVS---ESIPGNPERILNVSGPLDAVS 111
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L++ ++ E D A G++ ++ ++PNS GS+IGK G+ IK + S A
Sbjct: 112 KAFGLIVRRINDEPF--DSASVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGAR 169
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRA---LELILLKLSEDTLYSQTMTVPY----- 206
+ S + G +R+++++G D A + IL++ +E ++ +
Sbjct: 170 LNAS--EGMLPGSTERVLSVSGVADAIHIATYYIGNILIEANERQPHAANSSYRPSSYSR 227
Query: 207 ------TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLT 260
T + G+ PY PPP A AH + +
Sbjct: 228 RPPYPATGGSSYVPGYTN-PY---PPPTAA----ALAH---------------GQLQTQQ 264
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG---------TSERKVTISG 311
I + ++ +G ++G+GG I EI +S ++IK+ + G +ER V I+G
Sbjct: 265 IYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGATGQAGADGAPAGSENERLVVITG 324
Query: 312 PQRSIRTAESMIMQKV 327
+I+ A ++ ++
Sbjct: 325 APANIQMAVQLLYSRL 340
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 50/217 (23%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
+S P + I+F++ N G+VIGKGGS I + Q SGAR L+ S PG+T+R++
Sbjct: 129 ASVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGAR--LNASEGMLPGSTERVLS 186
Query: 87 ISGTIDEILRAV----DLVIDKLLTELHAEDQADDV------------------------ 118
+SG D I A +++I+ + HA + +
Sbjct: 187 VSGVADAIHIATYYIGNILIEANERQPHAANSSYRPSSYSRRPPYPATGGSSYVPGYTNP 246
Query: 119 -----------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI--------SR 159
G ++ +PN G IIGK GA I S + IKI +
Sbjct: 247 YPPPTAAALAHGQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGATGQAG 306
Query: 160 LDHSYYGL-NDRLVTLTGTLDEQMRALELILLKLSED 195
D + G N+RLV +TG A++L+ +L ++
Sbjct: 307 ADGAPAGSENERLVVITGAPANIQMAVQLLYSRLEQE 343
>gi|70933846|ref|XP_738237.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514288|emb|CAH87175.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 262
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 92/154 (59%), Gaps = 9/154 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T + +++ L++N +AG++IGK GS I+ ++++G ++LS ++ +FP T R+++I G
Sbjct: 15 TSQLCFVKMLINNLVAGSIIGKNGSIISGIENKTGCSLKLSPNNSYFPNTQKRVLVICGK 74
Query: 91 IDEILRAVDLVIDKLL-----TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+EI + +++DK+ +H + T T R++VP S+ +IIGK G IK
Sbjct: 75 QEEINNVIIIILDKIRQISIPNNMHVNKNENKTQTYT-CRVVVPKSAVSAIIGKGGHQIK 133
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+++ I+IS + GLN+R++++ G+ D
Sbjct: 134 QLQNNTGTKIQISNRED---GLNERIISIVGSFD 164
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 90/218 (41%), Gaps = 49/218 (22%)
Query: 112 EDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
E+Q GT +++++ N GSIIGK G+ I + + +K+S + +
Sbjct: 7 EEQTIKCGTSQLCFVKMLINNLVAGSIIGKNGSIISGIENKTGCSLKLSPNNSYFPNTQK 66
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVP 229
R++ + G +E + +IL K+ +
Sbjct: 67 RVLVICGKQEEINNVIIIILDKIRQ----------------------------------I 92
Query: 230 AVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
++P+N + +N +T + + V + ++G+GG I ++ +G +
Sbjct: 93 SIPNNMHVN----------KNENKTQTYTCRVVVPKSAVSAIIGKGGHQIKQLQNNTGTK 142
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
I++S+R D G +ER ++I G S+R + ++ +
Sbjct: 143 IQISNRED---GLNERIISIVGSFDSVRDTTTKVIASI 177
>gi|322708646|gb|EFZ00223.1| hypothetical protein MAA_04000 [Metarhizium anisopliae ARSEF 23]
Length = 456
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 156/367 (42%), Gaps = 87/367 (23%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG
Sbjct: 109 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGI----- 160
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A L+I L E E A +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 161 -AFGLIIRTLNNEPLGE--ASTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 217
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRAL----ELILLKLSE------DTLYSQTMTV 204
+ S D ++R + + G D A +L +L+E + Y+
Sbjct: 218 LNAS--DSCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRSGA 275
Query: 205 PYTYAGVFFSGFHGMPYGAVP----------------------PPV---PAVPHNTA--- 236
P AG G +PY P PP P PHN A
Sbjct: 276 P---AGSIPGGMQVVPYSPQPASGHYGRPENYGRHQDRRAHHMPPATYPPHYPHNAAPPN 332
Query: 237 -----------AHYG----------PNMG--------GRKFQNNKDDRTNSLTIGVADEH 267
A YG P++G G Q+ + I + ++
Sbjct: 333 PAMPMQYGGQQAAYGGAPHATQHMPPHVGPQPHGGPQGPPMQHGMPGGPLTQQIFIPNDM 392
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+GG+ I EI QISG+ IK+++ D ++ER VTI+G + R A M+ ++
Sbjct: 393 VGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLYSRL 449
Query: 328 AYASDRL 334
R+
Sbjct: 450 ESEKHRV 456
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 381 PLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEEC 437
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 438 NRMALYMLYSRLESEKH 454
>gi|291234615|ref|XP_002737239.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1-like
[Saccoglossus kowalevskii]
Length = 655
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 141/302 (46%), Gaps = 24/302 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IGK G+ I Q+ A++ + RS E ++ I I GT +
Sbjct: 230 VRLLVPSSMVGAIIGKKGANIRLITQQTKAKVDILRSKEN-ASALEKAINIYGTPLQCSN 288
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
V+ +++ ++ E +++ + + L+L+ NS G +IGK G T+ M++S +
Sbjct: 289 TVEQIMETMVKE----NESANPSIEIPLKLLAHNSLVGRLIGKGGTTLNKIMEESNTKVS 344
Query: 157 ISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVPYTYA 209
IS L + Y + +R +T+ G+L+++ +A E++ KL + +L Q P
Sbjct: 345 ISNLQELTIYNM-ERTITIKGSLNDECKAEEMVSEKLRDSFRADMASLTQQYNLFPGLNH 403
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHY---GPNMGGRKFQNNKDDRTNSLTIGVADE 266
FSG P GA+ HN+A Y GP + + + +
Sbjct: 404 ASVFSGLGNSP-GAI---FNVAMHNSAVLYAIFGPAAYTVNTHHLLQPPSEITYLFIPIS 459
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVS-DRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+G ++G G+ I EISQ S A+++V R + ER V I G + A+ I
Sbjct: 460 AVGAIIGVKGQEIREISQKSSAKVRVEPPRSE---DDEERAVYIEGYPDAQWIAQWFIYH 516
Query: 326 KV 327
K+
Sbjct: 517 KI 518
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 25 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 79
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 80 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 139
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 140 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 192
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 53/193 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A I IS + +R++TLTG + +
Sbjct: 25 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 79
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I+ KL ED S T + A PPV
Sbjct: 80 AFAMIIDKLEEDINSSMTNST-----------------AASRPPV--------------- 107
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 108 --------------TLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNST 151
Query: 304 ERKVTISGPQRSI 316
ER +TI+G +S+
Sbjct: 152 ERAITIAGVPQSV 164
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 99 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 156
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 157 IAGVPQSVTECVKQICLVMLETLSQ 181
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ I + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 32 KEVGSIIGKKGESVKRIREESGARINISE-----GNCPERIITLTGPTNAIFKAFAMIID 86
Query: 326 KV 327
K+
Sbjct: 87 KL 88
>gi|169844143|ref|XP_001828793.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|116510164|gb|EAU93059.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 343
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 146/322 (45%), Gaps = 54/322 (16%)
Query: 18 RSTAPVKSLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
++T+P +S S P T +R LVS AG +IGK G + D + Q+G + +S+
Sbjct: 10 QTTSPPRSRSPTPAPNETLTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSK---V 66
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSI 136
G +R++ ++G+++ + +A +L+I +L++ A A T +RL++ ++ G+I
Sbjct: 67 IAGVHERVLTVTGSVEAVAKAYNLIISQLVSSNPAAPPASSSNVHTSIRLLISHNLMGTI 126
Query: 137 IGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IG+ G IK+ D+S A + S+ L S +R+V + G+ + RA+E I L E
Sbjct: 127 IGRNGLKIKAIQDNSGARMVASKEMLPQS----TERVVEVQGSPEAIGRAVEEIGKCLLE 182
Query: 195 DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG---PNMGG-RKFQN 250
D G+ FH P+ N Y P GG R+
Sbjct: 183 D-----------WERGLGTVLFHPGPHDD------RSRSNRGGQYSGSYPTGGGSRRPNG 225
Query: 251 NKDDR-------------------TNSLT--IGVADEHIGFVVGRGGRNIMEISQISGAR 289
+ +R TN T I + + +G ++GR G I EI ++SG++
Sbjct: 226 DSANRARAPSPGSPQSPSSSNPPATNLRTQNISIPSDMVGCIIGRSGTKITEIRRLSGSK 285
Query: 290 IKVSDRGDFFSGTSERKVTISG 311
I ++ T ER TI G
Sbjct: 286 ISIAK--APHDDTGERMFTIVG 305
>gi|388579892|gb|EIM20211.1| hypothetical protein WALSEDRAFT_33458 [Wallemia sebi CBS 633.66]
Length = 349
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 149/340 (43%), Gaps = 43/340 (12%)
Query: 18 RSTAPVKSLSSDPTEKPTY--------------IRFLVSNPLAGAVIGKGGSTINDFQSQ 63
RS +P SS E+P+Y +R L+ A +IGKGG I +
Sbjct: 9 RSRSPTPERSS--YERPSYKRPHIVKDDNPYLTVRSLIDTRDASIIIGKGGQNIAKIRET 66
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT- 122
SG ++ +S S P +R++ +G +D + +A LV+ + E +Q G+K
Sbjct: 67 SGIKLVVSGS---IPNNPERLLTATGQLDAVSKAFGLVVRTINDEDF--NQPSLPGSKAV 121
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
L+ +PN G IIG+AGA IK + S A KIS D+ +R++++ G D
Sbjct: 122 TLKFAIPNMKMGFIIGRAGAKIKEIQEASGA--KISTSDYVLPNSTERVLSIDGVADAVH 179
Query: 183 RALELILLKLSEDT------------LYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPA 230
A+ + + L++ T + +Q+ +Y YG +P
Sbjct: 180 IAIYHVGMILADQTAVPSKERGDRRRVQNQSYGDTSSYGSPAPYAAAPPVYGMLPTYAST 239
Query: 231 VPHNTAAHYG--PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
VP A G P GG + T S I V + +G ++G+GG I +I S
Sbjct: 240 VPGPAPAQLGGAPPFGG--YPTLPVAETTSQKIYVPNNLVGGLIGKGGSKINQIRYTSQC 297
Query: 289 RIKVSD--RGDFFSGTS-ERKVTISGPQRSIRTAESMIMQ 325
IK+ + G+ G S ER V ISGP I+ A +M+ +
Sbjct: 298 SIKILEPGEGEQTEGPSIERLVLISGPASGIQIAINMLSE 337
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 6 SSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIND--FQSQ 63
+S VP P P + P + T + V N L G +IGKGGS IN + SQ
Sbjct: 237 ASTVPGPAPAQLGGAPPFGGYPTLPVAETTSQKIYVPNNLVGGLIGKGGSKINQIRYTSQ 296
Query: 64 SGARIQLSRSHEFFPG-TTDRIIMISGTIDEILRAVDLV 101
+I E G + +R+++ISG I A++++
Sbjct: 297 CSIKILEPGEGEQTEGPSIERLVLISGPASGIQIAINML 335
>gi|255725734|ref|XP_002547796.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135687|gb|EER35241.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 379
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 137/307 (44%), Gaps = 44/307 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG G I+ + ++ + +SR PG+ +RI+ +SG +D+ +A
Sbjct: 102 RVLVSAKEAGCLIGTNGQVIDSIRGETNTKAGISR---LVPGSHERILTVSGKLDDCAKA 158
Query: 98 VDLVIDKLLTE---------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
+ L+ L + T LRL++PN+ G++IG GA I+
Sbjct: 159 LSYFAQALVNANIESYNYFPLKQLSSTPNTEETTILRLLIPNTQMGTLIGSKGARIQQI- 217
Query: 149 DDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
Q+ IS + + G N+RLV L G++D+ +L +I L ED
Sbjct: 218 ---QSKYNISMIASKSFLPGSNERLVELQGSVDDLYDSLRVISRCLMED----------- 263
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
FS G+ Y VP + +N+ + G + T T+ ++
Sbjct: 264 ------FSSIVGVSY-YVPRGSNSSNNNSNSSS---STGGLSSGSGGTNTKKATLTFPND 313
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+G ++G+ G I + +I+GA I +SD G+ ER TI+G +++ A+ MI Q
Sbjct: 314 IVGALIGKQGARINGVRKITGATISISDGGE-----DERIFTITGSSQAVEKAKQMIYQN 368
Query: 327 VAYASDR 333
+R
Sbjct: 369 YKREEER 375
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 45/200 (22%)
Query: 22 PVKSLSSDP-TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P+K LSS P TE+ T +R L+ N G +IG G+ I QS+ I + S F PG+
Sbjct: 178 PLKQLSSTPNTEETTILRLLIPNTQMGTLIGSKGARIQQIQSK--YNISMIASKSFLPGS 235
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK------------------- 121
+R++ + G++D++ ++ ++ L+ ED + VG
Sbjct: 236 NERLVELQGSVDDLYDSLRVISRCLM-----EDFSSIVGVSYYVPRGSNSSNNNSNSSSS 290
Query: 122 -------------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
K L PN G++IGK GA I + A I IS G +
Sbjct: 291 TGGLSSGSGGTNTKKATLTFPNDIVGALIGKQGARINGVRKITGATISISD-----GGED 345
Query: 169 DRLVTLTGTLDEQMRALELI 188
+R+ T+TG+ +A ++I
Sbjct: 346 ERIFTITGSSQAVEKAKQMI 365
>gi|393236643|gb|EJD44191.1| eukaryotic type KH-domain (KH-domain type I) [Auricularia delicata
TFB-10046 SS5]
Length = 450
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 111/211 (52%), Gaps = 30/211 (14%)
Query: 11 SPDVHGKRSTAPVK--SLSSDPTEKPT-------YIRFLVSNPLAGAVIGKGGSTINDFQ 61
+PD +GK S+ P K S++P+ KPT ++R L+ A +IGKGG+ +N+ +
Sbjct: 65 APDANGKPSSVPAKPEGASTNPS-KPTAPTGAMIHMRCLIVTQDASIIIGKGGAHVNEIR 123
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV--- 118
+SGAR+ +S E PG +RI+ +SG +D + +A L++ ++ D+ DV
Sbjct: 124 EKSGARVVVS---ESIPGNPERILNVSGPLDAVSKAFGLIVRRI------NDEPFDVPSV 174
Query: 119 -GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
G++ ++ ++PNS GS+IGK G IK + S A + S + G +R++++ G
Sbjct: 175 PGSRAVTIKFMIPNSRMGSVIGKGGVKIKEIQEASGARLNAS--EGVLPGSTERVLSVAG 232
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
D A+ + + L +Q P++
Sbjct: 233 VAD----AIHIATYYIGNILLEAQAHGGPHS 259
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 54/201 (26%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G +R ++ IIGK GA + + S A + +S S G +R++ ++G L
Sbjct: 94 GAMIHMRCLIVTQDASIIIGKGGAHVNEIREKSGARVVVSE---SIPGNPERILNVSGPL 150
Query: 179 DEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAH 238
D +A LI+ +++++ P+ VP+VP
Sbjct: 151 DAVSKAFGLIVRRINDE---------PFD--------------------VPSVP------ 175
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
R ++ + + +G V+G+GG I EI + SGAR+ S+
Sbjct: 176 --------------GSRAVTIKFMIPNSRMGSVIGKGGVKIKEIQEASGARLNASE--GV 219
Query: 299 FSGTSERKVTISGPQRSIRTA 319
G++ER ++++G +I A
Sbjct: 220 LPGSTERVLSVAGVADAIHIA 240
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSD---RGDFFSGTSERKVTISGPQRSIRTA 319
+ ++ +G ++G+GG I EI +S + IK+ + GD G +ER VTI+G +I+ A
Sbjct: 369 IPNDLVGCIIGKGGSKINEIRHLSASAIKIMEPGVAGDAGGGPNERLVTITGAPHNIQMA 428
Query: 320 ESMIMQKVAYASDRLM 335
S++ Q++ + M
Sbjct: 429 VSLLYQRLEQEKQKQM 444
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR---SHEFFPGTTDRIIMISGTIDEI 94
+ + N L G +IGKGGS IN+ + S + I++ + + G +R++ I+G I
Sbjct: 366 QIFIPNDLVGCIIGKGGSKINEIRHLSASAIKIMEPGVAGDAGGGPNERLVTITGAPHNI 425
Query: 95 LRAVDLVIDKLLTE 108
AV L+ +L E
Sbjct: 426 QMAVSLLYQRLEQE 439
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR---LDHSYYGLNDRLVTLTGTLDEQ 181
++ +PN G IIGK G+ I S + IKI + G N+RLVT+TG
Sbjct: 366 QIFIPNDLVGCIIGKGGSKINEIRHLSASAIKIMEPGVAGDAGGGPNERLVTITGAPHNI 425
Query: 182 MRALELILLKLSED 195
A+ L+ +L ++
Sbjct: 426 QMAVSLLYQRLEQE 439
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
++G+GG ++ EI + SGAR+ VS+ G ER + +SGP ++ A +I++++
Sbjct: 110 IIIGKGGAHVNEIREKSGARVVVSES---IPGNPERILNVSGPLDAVSKAFGLIVRRI 164
>gi|168028621|ref|XP_001766826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682035|gb|EDQ68457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 705
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V N G VIGKGG TI Q QSGARIQ++R E P ++ R + + GT ++I RA L
Sbjct: 251 VPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTPEQISRAEQL 310
Query: 101 VIDKLLTELHAEDQADDVGTKT-----------KLRLIVPNSSCGSIIGKAGATIKSFMD 149
V D ++ E A ++++ VPN+ G IIG+ G TIK+
Sbjct: 311 VKD-VIAEASAGTPGGGGLGGRGFGGPVGPAGEQVQVKVPNNKVGLIIGRGGETIKNLQS 369
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
S A I++ + G +R+VTL G A ELI + E T Y
Sbjct: 370 RSGARIQVQNDSETEPGATERMVTLIGNKKATDMAYELIKEVIDELTSY 418
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ V N G +IG+GG TI + QS+SGARIQ+ E PG T+R++ + G
Sbjct: 344 VQVKVPNNKVGLIIGRGGETIKNLQSRSGARIQVQNDSETEPGATERMVTLIGNKKATDM 403
Query: 97 AVDL---VIDKLLT 107
A +L VID+L +
Sbjct: 404 AYELIKEVIDELTS 417
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P GG+ F + S I V + +G V+G+GG I + SGARI+V+ G+
Sbjct: 230 PQHGGQNF-YSPGGPNQSRKIDVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDP 288
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKVAYAS 331
+S R+V + G I AE ++ +A AS
Sbjct: 289 RSSTRQVELMGTPEQISRAEQLVKDVIAEAS 319
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + V + +G ++GRGG I + SGARI+V + + G +ER VT+ G +++
Sbjct: 344 VQVKVPNNKVGLIIGRGGETIKNLQSRSGARIQVQNDSETEPGATERMVTLIGNKKATDM 403
Query: 319 AESMIMQ 325
A +I +
Sbjct: 404 AYELIKE 410
>gi|355709446|gb|AES03594.1| Poly rC-binding protein 1 [Mustela putorius furo]
Length = 209
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 53/193 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A I IS + +R++TLTG + +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I+ KL ED S T ++TAA P
Sbjct: 71 AFAMIIDKLEEDINSSMT-------------------------------NSTAASRPPV- 98
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 99 --------------TLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNST 142
Query: 304 ERKVTISGPQRSI 316
ER +TI+G +S+
Sbjct: 143 ERAITIAGVPQSV 155
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ I + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKRIREESGARINISE-----GNCPERIITLTGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|299753134|ref|XP_001833083.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|298410159|gb|EAU88772.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 382
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 149/322 (46%), Gaps = 37/322 (11%)
Query: 19 STAPVKSLSSDPTEKP-TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
S P S S+ P ++R L+ A +IGKGG+ +N+ + +SGAR+ +S E
Sbjct: 67 SAEPTSSTSTAPPPSAHIHMRCLIVTQDASIIIGKGGAHVNEIREKSGARVMVS---ESI 123
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSS 132
PG +RI+ +SG +D + +A L++ ++ D+ DV G++ ++ ++PNS
Sbjct: 124 PGNPERILNVSGPLDAVSKAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSR 177
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI--LL 190
GS+IGKAG IK D S A + S + G +R++++ G D A I +L
Sbjct: 178 MGSVIGKAGCKIKEIQDASGARLNAS--EGMLPGSTERVLSVAGVADAIHIATYYIGNIL 235
Query: 191 KLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY-GPNMGGRKFQ 249
+ + L S + AG S H T + Y G
Sbjct: 236 IEANERLPSSNGSSYRPMAGSSASSSRRH-------------HYTGSSYVPGPYPGYPPP 282
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG----TSER 305
+N + + I + + +G ++GRGG I EI +S ++IK+ + G G ER
Sbjct: 283 HNPPQQLQTQEIFIPNGLVGCIIGRGGSKINEIRHMSASQIKIMEPGAGSGGRPAPEGER 342
Query: 306 KVTISGPQRSIRTAESMIMQKV 327
V I+G +++ A ++ ++
Sbjct: 343 LVVITGNPPNVQMAIQLLYTRL 364
>gi|426201505|gb|EKV51428.1| hypothetical protein AGABI2DRAFT_182391 [Agaricus bisporus var.
bisporus H97]
Length = 340
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 138/300 (46%), Gaps = 48/300 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGK G + D + Q+G + +S+ PG +R++ +SG++D + +
Sbjct: 27 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSK---VIPGVHERVLTVSGSVDAVAK 83
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L+I +L+T A T T +RL++ ++ G+IIG+ G IK+ D+S A +
Sbjct: 84 AYTLIITQLVTASPASPVVSSPSTIHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARM 143
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVPYT 207
S+ L S +R+V + G + RA+E I L ED T+ TV
Sbjct: 144 VASKEMLPQS----TERIVEVQGAPEAIGRAVEEIGKCLLEDWERGLGTVLFHPGTVDDR 199
Query: 208 YAGVFFSG-FHGMP-YG--------------AVPPPVPAVPHNTAAHYGPNMGGRKFQNN 251
G G + P YG A PP P H+ + P + QN
Sbjct: 200 SGGNRRQGSYSASPQYGAQRRANGDGNVRARASPPASPT--HSPISSQPP--ANLRTQN- 254
Query: 252 KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
I + + +G ++GR G I EI ++SG++I ++ +G ER TI G
Sbjct: 255 ---------ISIPSDMVGCIIGRSGTKITEIRRLSGSKISIAKAPHDETG--ERMFTIVG 303
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+ +P + S P+ T IR L+S+ L G +IG+ G I Q SGAR+ S+ E P
Sbjct: 94 TASPASPVVSSPSTIHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMVASK--EMLP 151
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
+T+RI+ + G + I RAV+ + LL ED +GT
Sbjct: 152 QSTERIVEVQGAPEAIGRAVEEIGKCLL-----EDWERGLGT 188
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 217 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 274
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 275 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 330
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 331 ISSLQDLSIYN-PERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNL 389
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP--HNTAAH-------YGPNMGGRKFQNNKDDRTN 257
+ G+F +G +P A P VP P H A H Y P+ ++
Sbjct: 390 SALGIFSTGLSMLPPPAGPRGVPPAPPYHPFATHSGYFSSLYPPHQFSPFPHHHSYPEQE 449
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 450 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 507
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 508 KAQGRIFGKL 517
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 217 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 274
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 275 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 305
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 306 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 339
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 340 YNPERTITVKGTVEACANAEIEIMKKLREAFENDML 375
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 451 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 508
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 509 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 565
Query: 157 ISR 159
+ R
Sbjct: 566 VPR 568
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 451 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 508
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 509 AQGRIFGKLKEENFFN 524
>gi|409083451|gb|EKM83808.1| hypothetical protein AGABI1DRAFT_117279 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 340
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 138/300 (46%), Gaps = 48/300 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGK G + D + Q+G + +S+ PG +R++ +SG++D + +
Sbjct: 27 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSK---VIPGVHERVLTVSGSVDAVAK 83
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L+I +L+T A T T +RL++ ++ G+IIG+ G IK+ D+S A +
Sbjct: 84 AYTLIITQLVTASPASPVVSSPSTVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARM 143
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVPYT 207
S+ L S +R+V + G + RA+E I L ED T+ TV
Sbjct: 144 VASKEMLPQS----TERIVEVQGAPEAIGRAVEEIGKCLLEDWERGLGTVLFHPGTVDDR 199
Query: 208 YAGVFFSG-FHGMP-YG--------------AVPPPVPAVPHNTAAHYGPNMGGRKFQNN 251
G G + P YG A PP P H+ + P + QN
Sbjct: 200 SGGNRRQGSYSASPQYGAQRRANGDGNVRARASPPASPT--HSPISSQPP--ANLRTQN- 254
Query: 252 KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
I + + +G ++GR G I EI ++SG++I ++ +G ER TI G
Sbjct: 255 ---------ISIPSDMVGCIIGRSGTKITEIRRLSGSKISIAKAPHDETG--ERMFTIVG 303
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+ +P + S P+ T IR L+S+ L G +IG+ G I Q SGAR+ S+ E P
Sbjct: 94 TASPASPVVSSPSTVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMVASK--EMLP 151
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
+T+RI+ + G + I RAV+ + LL ED +GT
Sbjct: 152 QSTERIVEVQGAPEAIGRAVEEIGKCLL-----EDWERGLGT 188
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 142/330 (43%), Gaps = 62/330 (18%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
TE P +R LV + + GA+IG+GGSTI Q+ AR+ + R G+ ++ I I G
Sbjct: 146 TEFP--LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNV--GSLEKAITIYGN 201
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ A +++ + E +++D + L+++ N+ G IIGK G TIK M +
Sbjct: 202 PENCTNACRKILEVMQQEATNTNKSDVI-----LKILAHNNLIGRIIGKEGNTIKRIMSE 256
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
++ I +S ++ +R++T+ G+++ +A I KL + P T
Sbjct: 257 TETKITVSSFNY------ERIITVKGSIENMSKAEAQISAKLRQSFENDLQSMAPQT--- 307
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGG----RKFQNNKDDRTNSLTIG---- 262
V F G H M A+ T Y P GG ++F TI
Sbjct: 308 VMFPGLHPM----------AMMSATGITY-PGRGGPTSYQQFAPAPYPPMYPSTIPPINP 356
Query: 263 -------------VADEHIGFVVGRGGRNIMEISQISGARIKVS-----------DRGDF 298
+ + +G ++G G NI + + SGA +KV+ + GD
Sbjct: 357 ALAADVQETAFLFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDA 416
Query: 299 FSG-TSERKVTISGPQRSIRTAESMIMQKV 327
S + RKVTI G S A+ MI K+
Sbjct: 417 NSAQQASRKVTIVGTADSQWKAQGMIFDKL 446
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 63/183 (34%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL------------NDRLVT 173
L +PNS+ G+IIG G+ I+S + S A +K++ ++ G+ R VT
Sbjct: 368 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 427
Query: 174 LTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPH 233
+ GT D Q +A +I KL ++ G VP
Sbjct: 428 IVGTADSQWKAQGMIFDKLRDE--------------------------GFVP-------- 453
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
NN++ R ++ I V +G ++GRGG N+ E+ +++G+ IK+
Sbjct: 454 ----------------NNEEVRL-TVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKLP 496
Query: 294 DRG 296
+G
Sbjct: 497 TQG 499
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT------------TDRIIM 86
+ N GA+IG GS I SGA ++++ + G R +
Sbjct: 368 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 427
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
I GT D +A ++ DKL E + + + + ++VP+S G IIG+ G+ ++
Sbjct: 428 IVGTADSQWKAQGMIFDKLRDEGFVPNNEE---VRLTVEILVPSSQVGRIIGRGGSNVRE 484
Query: 147 FMDDSQAVIKI 157
+ ++IK+
Sbjct: 485 LQRVTGSIIKL 495
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 53/193 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A I IS + +R++TLTG + +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I+ KL ED S T + A PPV
Sbjct: 71 AFAMIIDKLEEDINSSMTNST-----------------AASRPPV--------------- 98
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 99 --------------TLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNST 142
Query: 304 ERKVTISGPQRSI 316
ER +TI+G +S+
Sbjct: 143 ERAITIAGVPQSV 155
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ I + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKRIREESGARINISE-----GNCPERIITLTGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 30/325 (9%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P S P + P +R LV GA+IGK G TI + Q+ +++ + R G
Sbjct: 261 PGSSTQPKPLDFP--LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKEN--AGAA 316
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
++ I I T + A L+++ + E A+++ L+++ NS G +IGK G
Sbjct: 317 EKPITIHATPEGSSEACRLILEIMQKEADETKSAEEI----PLKILAHNSLVGRLIGKEG 372
Query: 142 ATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED----- 195
+K D+ I IS L D + Y +R +T+ G+++ A I+ KL E
Sbjct: 373 RNLKKIEQDTGTKITISPLQDLTIYN-PERTITVKGSIEACSNAEVEIMKKLREAYENDV 431
Query: 196 -TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPP-PVPAVPHNTAAHYGPNMGGR---- 246
+ Q +P + G+F +G +P A P A P+N A + P + G
Sbjct: 432 VAVNQQANLIPGLNLSALGIFSTGLSMLPSTAGPHGATAASPYNPFASHSPYLSGLYGAS 491
Query: 247 ---KFQNNKD-DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
F + + + + + +G ++G+ G++I ++++ +GA IK++
Sbjct: 492 RVGAFPHQHSVPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEG--PDA 549
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
SER V I+GP + A+ I K+
Sbjct: 550 SERMVIITGPPEAQFKAQGRIFGKL 574
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 63/232 (27%)
Query: 110 HAEDQADDVGTKTK-------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
H+ +Q G+ T+ LR++VP G+IIGK G TIK+ +Q+ + I R ++
Sbjct: 253 HSREQGQYPGSSTQPKPLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKEN 312
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG 222
+ G ++ +T+ T + A LIL + ++ +++
Sbjct: 313 A--GAAEKPITIHATPEGSSEACRLILEIMQKEADETKSAE------------------- 351
Query: 223 AVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEI 282
+P AH NSL +G ++G+ GRN+ +I
Sbjct: 352 -------EIPLKILAH------------------NSL--------VGRLIGKEGRNLKKI 378
Query: 283 SQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV--AYASD 332
Q +G +I +S D ER +T+ G + AE IM+K+ AY +D
Sbjct: 379 EQDTGTKITISPLQDLTIYNPERTITVKGSIEACSNAEVEIMKKLREAYEND 430
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G I +GA I+++ + P ++R+++I+G + +
Sbjct: 508 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEG--PDASERMVIITGPPEAQFK 565
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + K + + VP+S+ G +IGK G T+ + + A +
Sbjct: 566 AQGRIFGKLKEENFFNPKEE---VKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVI 622
Query: 157 ISR 159
+ R
Sbjct: 623 VPR 625
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK G IK + A IKI+ + ++R+V +TG + Q +
Sbjct: 508 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGP--DASERMVIITGPPEAQFK 565
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 566 AQGRIFGKLKEENFFN 581
>gi|302775686|ref|XP_002971260.1| hypothetical protein SELMODRAFT_171892 [Selaginella moellendorffii]
gi|300161242|gb|EFJ27858.1| hypothetical protein SELMODRAFT_171892 [Selaginella moellendorffii]
Length = 465
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R V N G VIGKGG TI Q QSGA+IQ++R E PG R + ++GT ++I RA
Sbjct: 133 RVDVPNTKVGLVIGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVELTGTPEQISRA 192
Query: 98 VDL---VIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
L V+ G + + VPN+ G IIGK G TI++ S A
Sbjct: 193 EQLIREVVGDQGIVGGPVGGGGTGGVGDPIHVRVPNNKVGLIIGKGGETIRNLQQTSGAR 252
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
I++ + G +R+VTL GT + A ++I
Sbjct: 253 IQVQHDRETEPGATERIVTLVGTKQQTDIATDMI 286
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P ++R V N G +IGKGG TI + Q SGARIQ+ E PG T+RI+ + GT +
Sbjct: 221 PIHVR--VPNNKVGLIIGKGGETIRNLQQTSGARIQVQHDRETEPGATERIVTLVGTKQQ 278
Query: 94 ILRAVDLVID 103
A D++ D
Sbjct: 279 TDIATDMIKD 288
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + V + +G ++G+GG I + Q SGARI+V + G +ER VT+ G ++
Sbjct: 222 IHVRVPNNKVGLIIGKGGETIRNLQQTSGARIQVQHDRETEPGATERIVTLVGTKQQTDI 281
Query: 319 AESMI 323
A MI
Sbjct: 282 ATDMI 286
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
+ V + +G V+G+GG I + Q SGA+I+V+ + G R+V ++G I AE
Sbjct: 134 VDVPNTKVGLVIGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVELTGTPEQISRAE 193
Query: 321 SMIMQKVA 328
+I + V
Sbjct: 194 QLIREVVG 201
>gi|392595587|gb|EIW84910.1| hypothetical protein CONPUDRAFT_117160 [Coniophora puteana
RWD-64-598 SS2]
Length = 378
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 171/368 (46%), Gaps = 54/368 (14%)
Query: 2 ETNESSYVPSPDVHGKR------------STAPVKSLSSDPTEKPT---YIRFLVSNPLA 46
+TN S+ P+P ++ +T+ S S++P + ++R L+ A
Sbjct: 10 DTNASTPSPNPASSARKEDGSDDAVRSLATTSAAPSASTNPNAPASAMIHMRCLIVTQDA 69
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
+IGKGG+ +N+ + +SGAR+ +S E PG +RI+ +SG +D + +A L++ ++
Sbjct: 70 SIIIGKGGTHVNEIREKSGARVVVS---ESIPGNPERILNVSGPLDAVSKAFGLIVRRI- 125
Query: 107 TELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
D+ DV G++ ++ ++PNS GS+IGK G+ IK D S A + S +
Sbjct: 126 -----NDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNAS--E 178
Query: 162 HSYYGLNDRLVTLTGTLDEQMRA---LELILLKLSE------DTLY---SQTMTVPYTYA 209
G +R++++ G D A + IL++ +E ++ Y S T PYT +
Sbjct: 179 GMLPGSTERVLSVAGVADAIHIATYYIGNILIEANERLPSSGNSSYRPSSYTRRPPYTGS 238
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIG 269
PY A P P P GP G N + + I + ++ +G
Sbjct: 239 SYVPGYSSSQPY-AGGPGGPGGPGGPPGPPGPGGPGGPGGPNPPQQLQTQQIYIPNDLVG 297
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDF----------FSGTSERKVTISGPQRSIRTA 319
++G+GG I EI +S ++IK+ + G G ER V I+G +I+ A
Sbjct: 298 CIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMNGAPAPSGGEGERLVVITGQPANIQMA 357
Query: 320 ESMIMQKV 327
++ ++
Sbjct: 358 VQLLYHRL 365
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 53/193 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A I IS + +R++TLTG + +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I+ KL ED S T + A PPV
Sbjct: 71 AFAMIIDKLEEDINSSMTNST-----------------AASRPPV--------------- 98
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 99 --------------TLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNST 142
Query: 304 ERKVTISGPQRSI 316
ER +TI+G +S+
Sbjct: 143 ERAITIAGVPQSV 155
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ I + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKRIREESGARINISE-----GNCPERIITLTGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 142/330 (43%), Gaps = 56/330 (16%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
TE P +R LV + + GA+IG+GGSTI Q+ AR+ + R G+ ++ I I G
Sbjct: 146 TEFP--LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNV--GSLEKAITIYGN 201
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ A +++ + E +++D + L+++ N+ G IIGK G TIK M +
Sbjct: 202 PENCTNACRKILEVMQQEATNTNKSDVI-----LKILAHNNLIGRIIGKEGNTIKRIMSE 256
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
++ I +S ++ +R++T+ G+++ +A I KL + P T
Sbjct: 257 TETKITVSSINDINSFNYERIITVKGSIENMSKAEAQISAKLRQSFENDLQSMAPQT--- 313
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGG----RKFQNNKDDRTNSLTIG---- 262
V F G H M A+ T Y P GG ++F TI
Sbjct: 314 VMFPGLHPM----------AMMSATGITY-PGRGGPTSYQQFAPAPYPPMYPSTIPPINP 362
Query: 263 -------------VADEHIGFVVGRGGRNIMEISQISGARIKVS-----------DRGDF 298
+ + +G ++G G NI + + SGA +KV+ + GD
Sbjct: 363 ALAADVQETAFLFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDA 422
Query: 299 FSG-TSERKVTISGPQRSIRTAESMIMQKV 327
S + RKVTI G S A+ MI K+
Sbjct: 423 NSAQQASRKVTIVGTADSQWKAQGMIFDKL 452
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 63/183 (34%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL------------NDRLVT 173
L +PNS+ G+IIG G+ I+S + S A +K++ ++ G+ R VT
Sbjct: 374 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 433
Query: 174 LTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPH 233
+ GT D Q +A +I KL ++ G VP
Sbjct: 434 IVGTADSQWKAQGMIFDKLRDE--------------------------GFVP-------- 459
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
NN++ R ++ I V +G ++GRGG N+ E+ +++G+ IK+
Sbjct: 460 ----------------NNEEVRL-TVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKLP 502
Query: 294 DRG 296
+G
Sbjct: 503 TQG 505
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT------------TDRIIM 86
+ N GA+IG GS I SGA ++++ + G R +
Sbjct: 374 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 433
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
I GT D +A ++ DKL E + + + + ++VP+S G IIG+ G+ ++
Sbjct: 434 IVGTADSQWKAQGMIFDKLRDEGFVPNNEE---VRLTVEILVPSSQVGRIIGRGGSNVRE 490
Query: 147 FMDDSQAVIKI 157
+ ++IK+
Sbjct: 491 LQRVTGSIIKL 501
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 142/330 (43%), Gaps = 56/330 (16%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
TE P +R LV + + GA+IG+GGSTI Q+ AR+ + R G+ ++ I I G
Sbjct: 146 TEFP--LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNV--GSLEKAITIYGN 201
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ A +++ + E +++D + L+++ N+ G IIGK G TIK M +
Sbjct: 202 PENCTNACRKILEVMQQEATNTNKSDVI-----LKILAHNNLIGRIIGKEGNTIKRIMSE 256
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
++ I +S ++ +R++T+ G+++ +A I KL + P T
Sbjct: 257 TETKITVSSINDINSFNYERIITVKGSIENMSKAEAQISAKLRQSFENDLQSMAPQT--- 313
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGG----RKFQNNKDDRTNSLTIG---- 262
V F G H M A+ T Y P GG ++F TI
Sbjct: 314 VMFPGLHPM----------AMMSATGITY-PGRGGPTSYQQFAPAPYPPMYPSTIPPINP 362
Query: 263 -------------VADEHIGFVVGRGGRNIMEISQISGARIKVS-----------DRGDF 298
+ + +G ++G G NI + + SGA +KV+ + GD
Sbjct: 363 ALAADVQETAFLFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDA 422
Query: 299 FSG-TSERKVTISGPQRSIRTAESMIMQKV 327
S + RKVTI G S A+ MI K+
Sbjct: 423 NSAQQASRKVTIVGTADSQWKAQGMIFDKL 452
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 63/183 (34%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL------------NDRLVT 173
L +PNS+ G+IIG G+ I+S + S A +K++ ++ G+ R VT
Sbjct: 374 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 433
Query: 174 LTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPH 233
+ GT D Q +A +I KL ++ G VP
Sbjct: 434 IVGTADSQWKAQGMIFDKLRDE--------------------------GFVP-------- 459
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
NN++ R ++ I V +G ++GRGG N+ E+ +++G+ IK+
Sbjct: 460 ----------------NNEEVRL-TVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKLP 502
Query: 294 DRG 296
+G
Sbjct: 503 TQG 505
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT------------TDRIIM 86
+ N GA+IG GS I SGA ++++ + G R +
Sbjct: 374 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 433
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
I GT D +A ++ DKL E + + + + ++VP+S G IIG+ G+ ++
Sbjct: 434 IVGTADSQWKAQGMIFDKLRDEGFVPNNEE---VRLTVEILVPSSQVGRIIGRGGSNVRE 490
Query: 147 FMDDSQAVIKI 157
+ ++IK+
Sbjct: 491 LQRVTGSIIKL 501
>gi|302756263|ref|XP_002961555.1| hypothetical protein SELMODRAFT_437890 [Selaginella moellendorffii]
gi|300170214|gb|EFJ36815.1| hypothetical protein SELMODRAFT_437890 [Selaginella moellendorffii]
Length = 471
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R V N G VIGKGG TI Q QSGA+IQ++R E PG R + ++GT ++I RA
Sbjct: 133 RVDVPNTKVGLVIGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVELTGTPEQISRA 192
Query: 98 VDL---VIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
L V+ + + VPN+ G IIGK G TI++ S A
Sbjct: 193 EQLIREVVGDQGIVGGPVGGGGTGSVGDPIHVRVPNNKVGLIIGKGGETIRNLQQTSGAR 252
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
I++ + G +R+VTL GT + A ++I
Sbjct: 253 IQVQHDRETEPGATERIVTLVGTKQQTDIATDMI 286
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P ++R V N G +IGKGG TI + Q SGARIQ+ E PG T+RI+ + GT +
Sbjct: 221 PIHVR--VPNNKVGLIIGKGGETIRNLQQTSGARIQVQHDRETEPGATERIVTLVGTKQQ 278
Query: 94 ILRAVDLVID 103
A D++ D
Sbjct: 279 TDIATDMIKD 288
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + V + +G ++G+GG I + Q SGARI+V + G +ER VT+ G ++
Sbjct: 222 IHVRVPNNKVGLIIGKGGETIRNLQQTSGARIQVQHDRETEPGATERIVTLVGTKQQTDI 281
Query: 319 AESMI 323
A MI
Sbjct: 282 ATDMI 286
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
+ V + +G V+G+GG I + Q SGA+I+V+ + G R+V ++G I AE
Sbjct: 134 VDVPNTKVGLVIGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVELTGTPEQISRAE 193
Query: 321 SMIMQKVA 328
+I + V
Sbjct: 194 QLIREVVG 201
>gi|118792630|ref|XP_320427.3| AGAP012103-PA [Anopheles gambiae str. PEST]
gi|116116989|gb|EAA00333.3| AGAP012103-PA [Anopheles gambiae str. PEST]
Length = 494
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 35/307 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 67 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNV--GSVEKAITIYGNPENCTM 124
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E ++ ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 125 ACKKILEVMQQEANSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 179
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVPYTYA 209
+S + D S + L +R++T+ G+++ + I KL + L QT+ P +
Sbjct: 180 VSSINDISSFNL-ERIITVKGSIENMSKGESQISAKLRQSYENDLQALAPQTIMFPGLHP 238
Query: 210 GVFFS------GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLT-IG 262
S GF G GA TA+ G G +N T +
Sbjct: 239 MAMMSTAGNGMGFTGRTAGA-----------TASASGSGATGMYPGSNFPIEVQETTYLY 287
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAE 320
+ + +G ++G G +I I + SGA +K++ + +ERKVTI G + A+
Sbjct: 288 IPNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERKVTIIGTPEAQWKAQ 347
Query: 321 SMIMQKV 327
+I +K+
Sbjct: 348 YLIFEKM 354
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 53/200 (26%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G I++ + S A +KI+ L D +R VT+ GT + Q +
Sbjct: 286 LYIPNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERKVTIIGTPEAQWK 345
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI K+ E+ S T
Sbjct: 346 AQYLIFEKMREEGFVSGT------------------------------------------ 363
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DD ++ I V +G ++G+GG+N+ E+ +++G+ IK+ +
Sbjct: 364 ---------DDVRLTVEIFVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEHTASAPVDE 414
Query: 304 ERKVTISGPQRSIRTAESMI 323
E V I GP S+++A+ I
Sbjct: 415 ETTVHIIGPFFSVQSAQRRI 434
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG--TTDRI 84
S+ P E + N GA+IG G I + SGA ++++ P T+R
Sbjct: 274 SNFPIEVQETTYLYIPNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERK 333
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+ I GT + +A L+ +K+ E DDV + + + VP++ G IIGK G +
Sbjct: 334 VTIIGTPEAQWKAQYLIFEKMREEGFVSG-TDDV--RLTVEIFVPSAQVGRIIGKGGQNV 390
Query: 145 KSFMDDSQAVIKI 157
+ + ++IK+
Sbjct: 391 RELQRVTGSIIKL 403
>gi|393220213|gb|EJD05699.1| hypothetical protein FOMMEDRAFT_79532 [Fomitiporia mediterranea
MF3/22]
Length = 281
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 56/304 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IG+ G +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 3 HMRCLIVTQDASIIIGRAGKHVNEIREKSGARVVVS---ESIPGNPERILNVSGPLDAVS 59
Query: 96 RAVDLVIDKLLTELHAEDQADDV----GTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+A L++ ++ D+ DV G++ ++ ++PNS GSIIGK GA IK D
Sbjct: 60 KAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDA 113
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
S A + S + G +R++++ G D ++ T Y
Sbjct: 114 SGARLNAS--EGMLPGSTERVLSVAGV----------------ADAIHIAT----YYVGN 151
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGF 270
+ M P +T + Y P+ + + ++ + I + ++ +G
Sbjct: 152 ILIECQERM------------PSSTNSSYRPSNRAPRPPLSGGAQSYTQQIYIPNDLVGC 199
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTS--------ERKVTISGPQRSIRTAESM 322
++G+GG I EI +S ++IK+ + G G S ER V I+G +I+ A +
Sbjct: 200 IIGKGGSKINEIRHMSASQIKIMEPGVTPPGMSGPAGGTENERLVIITGQPHNIQMAVQL 259
Query: 323 IMQK 326
+ +
Sbjct: 260 LYHR 263
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 26/187 (13%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P + I+F++ N G++IGK G+ I + Q SGAR L+ S PG+T+R++
Sbjct: 76 VPSVPGSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGAR--LNASEGMLPGSTERVL 133
Query: 86 MISGTIDEILRAV----DLVI---DKLLTELHAEDQADDVGTKTKL---------RLIVP 129
++G D I A +++I +++ + ++ + + + L ++ +P
Sbjct: 134 SVAGVADAIHIATYYVGNILIECQERMPSSTNSSYRPSNRAPRPPLSGGAQSYTQQIYIP 193
Query: 130 NSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL--------NDRLVTLTGTLDEQ 181
N G IIGK G+ I S + IKI + G+ N+RLV +TG
Sbjct: 194 NDLVGCIIGKGGSKINEIRHMSASQIKIMEPGVTPPGMSGPAGGTENERLVIITGQPHNI 253
Query: 182 MRALELI 188
A++L+
Sbjct: 254 QMAVQLL 260
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
++GR G+++ EI + SGAR+ VS+ G ER + +SGP ++ A +I++++
Sbjct: 15 IIIGRAGKHVNEIREKSGARVVVSES---IPGNPERILNVSGPLDAVSKAFGLIVRRI 69
>gi|393247644|gb|EJD55151.1| hypothetical protein AURDEDRAFT_50272, partial [Auricularia
delicata TFB-10046 SS5]
Length = 313
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 135/283 (47%), Gaps = 25/283 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV+ AG +IGK G + D + +G + +S+ PG +R++ I+G++D + +
Sbjct: 3 LRALVTTKDAGVIIGKAGKNVADIRDHTGVKAGVSK---VVPGVHERVLTITGSVDGVAK 59
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L+I +LL+ + +T LRL++ ++ GS+IG+ G IK+ D S A +
Sbjct: 60 AYTLIITQLLSASTSSPTISSPPPTQTALRLLISHNLMGSVIGRNGLKIKAIQDASGARM 119
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
S+ L S +R+V + GT + RA+E I L ED Q V F
Sbjct: 120 VASKDMLPQS----TERIVEVQGTAEAIGRAIEEIGKCLLEDWERGQ--------GTVLF 167
Query: 214 SGFHGMPYGAVPP-PVPAVPHNTAAHYGPNMGGRKFQNNKDDRT-NSL---TIGVADEHI 268
HG+ G P PA + + G + + + + N+L I + + +
Sbjct: 168 HPGHGVDDGRSPSRRSPASTFTSPSGMGRSSPVPSSPQSVNSASANNLRTQNISIPSDMV 227
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
G ++GR G I EI ++SG++I ++ T ER TI G
Sbjct: 228 GCIIGRQGTKITEIRRLSGSKISIAK--TPHDETGERMFTIVG 268
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 49/206 (23%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T +R L+S+ L G+VIG+ G I Q SGAR+ S+ + P +T+RI+ + GT + I
Sbjct: 86 TALRLLISHNLMGSVIGRNGLKIKAIQDASGARMVASK--DMLPQSTERIVEVQGTAEAI 143
Query: 95 LRAVDLVIDKLLTE---------LHAEDQADD---------------------------- 117
RA++ + LL + H DD
Sbjct: 144 GRAIEEIGKCLLEDWERGQGTVLFHPGHGVDDGRSPSRRSPASTFTSPSGMGRSSPVPSS 203
Query: 118 -----VGTKTKLR---LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
+ LR + +P+ G IIG+ G I S + I I++ H G +
Sbjct: 204 PQSVNSASANNLRTQNISIPSDMVGCIIGRQGTKITEIRRLSGSKISIAKTPHDETG--E 261
Query: 170 RLVTLTGTLDEQMRALELILLKLSED 195
R+ T+ GT + +AL L+ +L +
Sbjct: 262 RMFTIVGTPEANEKALFLLYNQLESE 287
>gi|190344879|gb|EDK36648.2| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 167/393 (42%), Gaps = 82/393 (20%)
Query: 7 SYVPSPDV-HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGA--VIGKGGSTINDFQSQ 63
+Y P P H ++ P+ + ++ PTY+ F + P+ A VIGK G IN + +
Sbjct: 171 AYDPVPFANHLDYTSRPMANHQAERESDPTYVSFRMYCPVKEASFVIGKRGDMINHLREK 230
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT- 122
+ ARIQ+S E +RII + G + + +A L+ +L E ED+ + ++
Sbjct: 231 ANARIQVS---ENIKDVQERIISVKGPAENVAKAFGLITRAILEE--PEDEPASIMSRQY 285
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
L++++P+ G IIGK G+ + ++S A +K + + DR++++ G D
Sbjct: 286 NLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLKAA--EQPLPNSTDRVLSVLGVGDAIH 343
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAG--VFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
A+ I + E + + Y G + G+ +P+NT + G
Sbjct: 344 IAIYYISQVIIEHKDILKKHKIVYYTPGNNQLMNNTMGL-----------IPNNTYGNTG 392
Query: 241 -----PNMGGRKFQNN------------------------KDDRTNSLT----------- 260
P GG FQ+N D+ N++
Sbjct: 393 IIGNDPIQGGAPFQHNYQRQFQPSAPSHNQITTPVPTQSYTDEHGNTMIGDVITSVPVPA 452
Query: 261 ----------IGVADEHIGFVVGRGGRNIMEISQISGA---RIKVSDRGDFFSG-----T 302
+ VA+ +IG V+G+GG NI +I + SG +I+ G T
Sbjct: 453 GTGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCSYVKIEPDQHQTIMLGRGRGLT 512
Query: 303 SERKVTISGPQRSIRTAESMIMQKVAYASDRLM 335
S RK+T++G SI+TA +I Q++ +R M
Sbjct: 513 SIRKLTLTGSINSIQTAIYLINQRIVADKERNM 545
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S +RI+ I+G D I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-----SCPERIVTITGPTDAIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++A V +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 134 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 181
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 53/188 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G T+K ++S A I IS +R+VT+TG D +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISE-----GSCPERIVTITGPTDAIFK 73
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I LK ED S T + + PPV
Sbjct: 74 AFSMIALKFEEDINASMTNSTVTSK-----------------PPV--------------- 101
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 102 --------------TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA--GDMLPNST 145
Query: 304 ERKVTISG 311
ER VTISG
Sbjct: 146 ERAVTISG 153
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V + +L
Sbjct: 155 PDAIIQCVKQICVVML 170
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
T+S + + ++ IG ++GR G I EI Q+SGA+IK+++ + G ER+VTI+G +
Sbjct: 290 TSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASE---GNGERQVTITGSPAN 346
Query: 316 IRTAESMI 323
I A+ +I
Sbjct: 347 ISLAQYLI 354
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A SMI
Sbjct: 26 KEVGSIIGKKGETVKKMREESGARINISE-----GSCPERIVTITGPTDAIFKAFSMIAL 80
Query: 326 K 326
K
Sbjct: 81 K 81
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ GS IN+ + SGA+I+++ + E G +R + I+G+ I A
Sbjct: 294 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASE---GNGERQVTITGSPANISLA 350
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRL 126
+I+ L Q V T L +
Sbjct: 351 -QYLINASLEMAKLSTQTASVTTPVDLNM 378
>gi|68473490|ref|XP_719303.1| hypothetical protein CaO19.13072 [Candida albicans SC5314]
gi|46441115|gb|EAL00415.1| hypothetical protein CaO19.13072 [Candida albicans SC5314]
Length = 369
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 34/302 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG G I+ ++++ + +SR PG+ +RI+ +SG +D+ +A
Sbjct: 74 RVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISR---LIPGSHERILTVSGKLDDCAKA 130
Query: 98 VDLVIDKLLTE---------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
+ L+ L + T LRL++PNS G++IG GA I+
Sbjct: 131 LSYFAQALINANIESYNYFPLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQQLQ 190
Query: 149 DDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSED--TLYSQTMTV 204
++ IS + + G N+RLV L GT+D+ +L +I L ED ++ T V
Sbjct: 191 NN----FNISMIASKSFLPGSNERLVELQGTVDDLYDSLRIISRCLIEDFSSIVGTTYYV 246
Query: 205 PYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
P G Y + + + N + + TI
Sbjct: 247 P-----------RGNTYNNNHSHSHSHNNTNNTNINNNNNNNNNTHGSGGNKTTDTISFP 295
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
++ +G ++G+ G I + ++SGA I +S+ G +ER TI+G ++ A+ MI
Sbjct: 296 NDIVGALIGKRGSRIDGVRKVSGAMIAISEA---IEGENERVFTITGSSHAVDKAKQMIY 352
Query: 325 QK 326
Q
Sbjct: 353 QN 354
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 55/212 (25%)
Query: 22 PVKSLSSDP-TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P+K LSS P TE+ T +R L+ N G +IG G+ I Q Q+ I + S F PG+
Sbjct: 150 PLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQ--QLQNNFNISMIASKSFLPGS 207
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------------- 120
+R++ + GT+D++ ++ ++++ ED + VGT
Sbjct: 208 NERLVELQGTVDDLYDSL-----RIISRCLIEDFSSIVGTTYYVPRGNTYNNNHSHSHSH 262
Query: 121 ------------------------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
KT + PN G++IGK G+ I S A+I
Sbjct: 263 NNTNNTNINNNNNNNNNTHGSGGNKTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIA 322
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
IS + G N+R+ T+TG+ +A ++I
Sbjct: 323 IS---EAIEGENERVFTITGSSHAVDKAKQMI 351
>gi|68473725|ref|XP_719187.1| hypothetical protein CaO19.5627 [Candida albicans SC5314]
gi|46440993|gb|EAL00294.1| hypothetical protein CaO19.5627 [Candida albicans SC5314]
Length = 368
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 34/302 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG G I+ ++++ + +SR PG+ +RI+ +SG +D+ +A
Sbjct: 73 RVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISR---LIPGSHERILTVSGKLDDCAKA 129
Query: 98 VDLVIDKLLTE---------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
+ L+ L + T LRL++PNS G++IG GA I+
Sbjct: 130 LSYFAQALINANIESYNYFPLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQQLQ 189
Query: 149 DDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSED--TLYSQTMTV 204
++ IS + + G N+RLV L GT+D+ +L +I L ED ++ T V
Sbjct: 190 NN----FNISMIASKSFLPGSNERLVELQGTVDDLYDSLRIISRCLIEDFSSIVGTTYYV 245
Query: 205 PYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
P G Y + + + N + + TI
Sbjct: 246 P-----------RGNTYNNNHSHSHSHNNTNNTNINNNNNNNNNTHGSGGNKTTDTISFP 294
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
++ +G ++G+ G I + ++SGA I +S+ G +ER TI+G ++ A+ MI
Sbjct: 295 NDIVGALIGKRGSRIDGVRKVSGAMIAISEA---IEGENERVFTITGSSHAVDKAKQMIY 351
Query: 325 QK 326
Q
Sbjct: 352 QN 353
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 55/212 (25%)
Query: 22 PVKSLSSDP-TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P+K LSS P TE+ T +R L+ N G +IG G+ I Q Q+ I + S F PG+
Sbjct: 149 PLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQ--QLQNNFNISMIASKSFLPGS 206
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------------- 120
+R++ + GT+D++ ++ ++++ ED + VGT
Sbjct: 207 NERLVELQGTVDDLYDSL-----RIISRCLIEDFSSIVGTTYYVPRGNTYNNNHSHSHSH 261
Query: 121 ------------------------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
KT + PN G++IGK G+ I S A+I
Sbjct: 262 NNTNNTNINNNNNNNNNTHGSGGNKTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIA 321
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
IS + G N+R+ T+TG+ +A ++I
Sbjct: 322 IS---EAIEGENERVFTITGSSHAVDKAKQMI 350
>gi|189194345|ref|XP_001933511.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979075|gb|EDU45701.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 434
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 138/326 (42%), Gaps = 54/326 (16%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R + A +IGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVS 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L++ + L + E + +RL++P+ GSIIGKAG I+ + S A
Sbjct: 184 KAFGLIV-RTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNA-- 240
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTY 208
K++ D +R + + G D A+ + L E SQ T
Sbjct: 241 KLNASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 300
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP--------------------------- 241
A V G PY VP P A + + GP
Sbjct: 301 ANVVPGGMSVQPY--VPQPAGAGSPSRGPYGGPAAPTPYGAHPAAAPVAHGGAAPHAAVG 358
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
M G+ I + ++ +G ++G+GG I EI Q+SG+ IK+++ D
Sbjct: 359 AMPGQPLTQQ---------IFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTD---N 406
Query: 302 TSERKVTISGPQRSIRTAESMIMQKV 327
++ER VTI+G Q + A M+ ++
Sbjct: 407 SNERLVTITGTQECNQMALYMLYSRL 432
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 368 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNS----NERLVTITGTQECNQM 423
Query: 184 ALELILLKLSE 194
AL ++ +L +
Sbjct: 424 ALYMLYSRLGQ 434
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 249 QNNKDDRTNSLTI--GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERK 306
QN + D TN L + + ++G+GG N+ +I ++SGA+ VS D+ G ER
Sbjct: 116 QNQQVDETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERI 172
Query: 307 VTISGPQRSIRTAESMIMQKV 327
+T+SG ++ A +I++ +
Sbjct: 173 LTVSGQVDAVSKAFGLIVRTL 193
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+P + + N + GA+IGKGG+ IN+ + SG+ I++ +E + +R++ I+GT
Sbjct: 363 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNSNERLVTITGT 417
>gi|324506586|gb|ADY42808.1| RNA-binding protein Nova-2 [Ascaris suum]
Length = 565
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 109/197 (55%), Gaps = 13/197 (6%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
E+ ++ L+ + GA+IGKGG T+ +++SG R+Q+S++ E + GT +RI ++ G
Sbjct: 63 NEESVQVKILIPSAAVGAIIGKGGETMRSLKNESGCRLQMSKNQEVYHGTNERICLVKGK 122
Query: 91 IDEILRAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
I +++ V++V++K+ ++ D V +++L+VPN+S G +IGK+GA IK
Sbjct: 123 IASVMKVVEVVMEKIKEKVDPNTPCDVYDHKGVDRTKEMKLLVPNTSAGMVIGKSGARIK 182
Query: 146 SFMDDSQAVIKI---SRLDHSYYGLNDRLVTLTG-TLDEQMRALELILLKLSEDTLYSQT 201
D + A I++ + + L +R++T+ D M A++ +L K++ D ++
Sbjct: 183 EIRDQTGANIQVYPKAGSQEAKVSL-ERVITIAADDSDVLMNAIQRVLEKVAADPQHASA 241
Query: 202 MTVPYTYAGVFFSGFHG 218
+ A F G HG
Sbjct: 242 IEHKELEA---FGGLHG 255
>gi|221114013|ref|XP_002155770.1| PREDICTED: poly(rC)-binding protein 3-like [Hydra magnipapillata]
Length = 313
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 40/267 (14%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT--DRIIMISG 89
E+ + F++ + AG +IGK G I + +SGA I +S G+T +RI+ I G
Sbjct: 3 EEKLELHFIILSQDAGGIIGKEGRNIRQMRDESGANINVS-------GSTGVERILNIKG 55
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T E+ AV +V +KL L + ++ LRL+VPNS CG +IGK G IK +
Sbjct: 56 TSSEVKSAVRMVAEKLQEILSGSN--NEYVPPVTLRLLVPNSQCGPLIGKGGQRIKEIRE 113
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE--DTLYSQTMTVPYT 207
S A I I + G ++R VTL G+ + AL L + K+ + + ++ V Y
Sbjct: 114 ASGATITIP--SETLPGSSERSVTLAGSPE----ALGLCIAKIWDIFEEFPARQNNVQY- 166
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
F + G PH + G + R + + +
Sbjct: 167 -----FPNMYPRSMG---------PHQLSVMSG------QLSFTGLSRRSEQKVRLPSNV 206
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSD 294
IG ++G+GG +I EI Q SGA + V +
Sbjct: 207 IGSLIGKGGCHINEIRQFSGATVHVEE 233
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 57/191 (29%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K +L I+ + G IIGK G I+ D+S A I +S G+ +R++ + GT E
Sbjct: 5 KLELHFIILSQDAGGIIGKEGRNIRQMRDESGANINVS----GSTGV-ERILNIKGTSSE 59
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
A+ ++ KL E S VP PV
Sbjct: 60 VKSAVRMVAEKLQEILSGSNNEYVP---------------------PV------------ 86
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+L + V + G ++G+GG+ I EI + SGA I + +
Sbjct: 87 -----------------TLRLLVPNSQCGPLIGKGGQRIKEIREASGATITIPS--ETLP 127
Query: 301 GTSERKVTISG 311
G+SER VT++G
Sbjct: 128 GSSERSVTLAG 138
>gi|315042996|ref|XP_003170874.1| far upstream element-binding protein 3 [Arthroderma gypseum CBS
118893]
gi|311344663|gb|EFR03866.1| far upstream element-binding protein 3 [Arthroderma gypseum CBS
118893]
Length = 564
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 131/304 (43%), Gaps = 53/304 (17%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DEILRA 97
+ N G +IG+ G + ++++GAR+Q S E R+ ++GT D+
Sbjct: 195 IDNKYVGLIIGRQGENLRRIENETGARVQFLDSAEHNKAI--RLCRLTGTKSVRDKARAE 252
Query: 98 VDLVI--------DKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+D V+ D ++ +D +++VP+ + G +IG++G T++ +
Sbjct: 253 IDRVVNENNQSRNDGRPSDRSGQDGGRSGEGDETTKIMVPDRTVGLVIGRSGETVRDLAE 312
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
S I I+R S GL R VTLTG+ RA ELIL + DT
Sbjct: 313 RSGCRINIARDGESINGL--RPVTLTGSQQTIQRAKELILGIVESDTR------------ 358
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIG 269
G G P AA G N GG K N+K + + E++G
Sbjct: 359 ---TGGNQGQ----------REPRGQAAG-GENGGGDKL-NDK--------MFIPKEYVG 395
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAY 329
V+G+GG I E+ +SG +I + ER+VT G Q +I A+ ++ KV
Sbjct: 396 MVIGKGGETIRELQSLSGCKINIL---PLVGREPEREVTFYGVQTAIDAAKKAVLAKVEI 452
Query: 330 ASDR 333
A +R
Sbjct: 453 AKNR 456
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V + G VIG+ G T+ D +SG RI ++R E G R + ++G+ I RA
Sbjct: 288 KIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPVTLTGSQQTIQRA 345
Query: 98 VDLVI-----------DKLLTELHAEDQADDVGTKTKL--RLIVPNSSCGSIIGKAGATI 144
+L++ ++ E + + G KL ++ +P G +IGK G TI
Sbjct: 346 KELILGIVESDTRTGGNQGQREPRGQAAGGENGGGDKLNDKMFIPKEYVGMVIGKGGETI 405
Query: 145 KSFMDDSQAVIKI 157
+ S I I
Sbjct: 406 RELQSLSGCKINI 418
>gi|443926268|gb|ELU44971.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 389
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 149/309 (48%), Gaps = 33/309 (10%)
Query: 28 SDPTEKPT---YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
SDP P ++R L+ A +IGK G +N+ + +SGAR+ +S E PG +RI
Sbjct: 59 SDPPAPPAAQIHMRCLIVTQDASIIIGKAGKHVNEIREKSGARVMVS---ESIPGNPERI 115
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGAT 143
+ +SG +D + ++ L++ ++ E D G++ ++ I+P+S GS+IG+ G+
Sbjct: 116 LNVSGPLDAVSKSFGLIVRRINDEPF--DTPSVPGSRAVTIKFIIPHSRMGSVIGRGGSK 173
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA---LELILLKLSEDTLYSQ 200
IK D S A K++ + G +R+++++G D A + IL++ +E +S
Sbjct: 174 IKEIQDASGA--KLNASEGMLPGSTERILSVSGVADAIHIATYYVGNILIEAAERQPHSS 231
Query: 201 TMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLT 260
+ + Y +G G Y P T + Y +
Sbjct: 232 STST-YRPSGTSSRGPR---YAPTP---------TYSGYYGYPPPPAPAPYPPGPPQTQQ 278
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG-DFFSGTS-----ERKVTISGPQR 314
I + ++ +G ++G+GG I EI +S ++I++ + G GT+ ER V I+G +
Sbjct: 279 IYIPNDLVGCIIGKGGSKINEIRSLSASQIRIMEPGVQGPPGTAQGNPNERLVIITGQPQ 338
Query: 315 SIRTAESMI 323
+I+ A +++
Sbjct: 339 NIQMAVNLL 347
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 130/311 (41%), Gaps = 58/311 (18%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI------ 91
R L + L G+VIGK G+ IN + Q+ A++++ + +PG R+I++ +
Sbjct: 44 RILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVV---DPYPGADKRVILVYCYVKHRDLD 100
Query: 92 -------------DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
D +LR + ++D L T LH + D + + ++VP S ++IG
Sbjct: 101 AEGDDNEPVCAAQDALLRVHNAIVDALQT-LHKNHKDSDKKSTEEANILVPASQASNVIG 159
Query: 139 KAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL----ELIL 189
K+GA IK S+A IK+S D HS D V +TG + +AL +I
Sbjct: 160 KSGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKALFGVSTIIY 219
Query: 190 LKLSEDTLYSQT--------MTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
S++ + +T + +P S F+ P A+P P++ + + P
Sbjct: 220 KHPSKENIPLETSIPDPTPSIIIPSELPVYPASNFYSAPDAAIPSVHPSMSVLGSTRHVP 279
Query: 242 NMG------GR------------KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+ GR + K + IG V+GRGG I I
Sbjct: 280 ELAVPADDHGRLPIYQSILPVIPTYSAPKCSGELEFRVLCPGGKIGLVIGRGGATIKNIR 339
Query: 284 QISGARIKVSD 294
Q SGARI V D
Sbjct: 340 QESGARIDVDD 350
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 129/313 (41%), Gaps = 54/313 (17%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R L G VIG+GG+TI + + +SGARI + + + II T D A
Sbjct: 316 RVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAA 375
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
V+ V LL + D DD + LRL+VPN G +IG+ G+ + ++A I I
Sbjct: 376 VEAV---LLLQAKINDSEDD---RMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILI 429
Query: 158 SRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
S+ D +D LV ++G D+ AL I+L+L E L + G
Sbjct: 430 SKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREAVLKESVESQNSDRDGQLTVAA 489
Query: 217 HGMPYGAVPPPVPAVPHNT----------------------AAHYG-------------- 240
YG+ P +PHN + YG
Sbjct: 490 SDSLYGSSLPLPALLPHNQQIAPLGYDRRGEPERALEVFPRTSSYGYSSMQVTDDGYGGL 549
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV----SDRG 296
P+ + ++ + L + V I V+G+ G N+ I +ISGA I++ S R
Sbjct: 550 PSYASKAYE----EHVPRLEMTVPASGISKVMGKHGTNLDNIRKISGAHIEIIEPKSSRH 605
Query: 297 D---FFSGTSERK 306
+ + SGTSE++
Sbjct: 606 EHIAYISGTSEQR 618
>gi|170087462|ref|XP_001874954.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650154|gb|EDR14395.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 339
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 145/328 (44%), Gaps = 62/328 (18%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S P S ++ P ++R L+ A +IGKGGS +N+ + +SGAR+ +S E P
Sbjct: 41 SGEPSTSSTAAPPSANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVS---ESIP 97
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSC 133
G +RI+ +SG +D + +A L++ ++ D+ DV G++ ++ ++PNS
Sbjct: 98 GNPERILNVSGPLDAVSKAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRM 151
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA---LELILL 190
GS+IGK G+ IK D S A + S + G +R++++ G D A + IL+
Sbjct: 152 GSVIGKQGSKIKEIQDASGARLNAS--EGMLPGSTERVLSVAGVADAIHIATYYIGNILI 209
Query: 191 KLSEDTLYSQTMTV-PYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQ 249
+ E S T P YA +
Sbjct: 210 EAQERMPSSANSTYRPSRYASNPYP--------------------------------PPH 237
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF----------F 299
N + + I + ++ +G ++G+GG I EI +S ++IK+ + G
Sbjct: 238 NPPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMNGAPAPA 297
Query: 300 SGTSERKVTISGPQRSIRTAESMIMQKV 327
G ER V I+G +I+ A ++ ++
Sbjct: 298 GGEGERLVVITGQPANIQMAVQLLYHRL 325
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 150/337 (44%), Gaps = 32/337 (9%)
Query: 15 HGKRSTAPVKSLSSD-PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRS 73
+G P S SS P ++ +R LV GA+IGK G TI + Q+ +++ + R
Sbjct: 167 YGAPQPGPSGSYSSPRPRQQDFPLRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDIHRK 226
Query: 74 HEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSC 133
G ++ I I T + A +++D + E + +++ L+++ NS
Sbjct: 227 ENA--GAAEKPITIHSTPEGCSSACRMILDIMQKEANETKTNEEI----PLKILAHNSLV 280
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G +IGK G +K +++ I IS L +R +T+ G+L+ +A I+ KL
Sbjct: 281 GRLIGKEGRNLKKIEEETGTKITISSLQDLTICNPERTITVKGSLEACCKAEVEIMKKLK 340
Query: 194 E------DTLYSQTMTVP---YTYAGVFFSGFHGMP-----YGAVPPPVPAVPHNTAAH- 238
E + Q +P G+F SG +P GAVPP PA + +H
Sbjct: 341 EAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGSRGAVPPMPPAGYNPFLSHS 400
Query: 239 ------YG-PNMGGRKFQNNKDDRTNSLT-IGVADEHIGFVVGRGGRNIMEISQISGARI 290
YG P Q+++ + + + + +G ++G+ G++I +++ +GA I
Sbjct: 401 SHLSGLYGVPPTSAIPHQHSQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASI 460
Query: 291 KVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
K++ +ER V I+G + A+ I K+
Sbjct: 461 KIAPAES--PDVTERMVIITGTPEAQFKAQGRIFGKL 495
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TIK+ +Q+ + I R +++ G ++ +T+ T +
Sbjct: 190 LRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDIHRKENA--GAAEKPITIHSTPEGCSS 247
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL + ++ ++T +P AH
Sbjct: 248 ACRMILDIMQKEANETKTNE--------------------------EIPLKILAH----- 276
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NSL +G ++G+ GRN+ +I + +G +I +S D
Sbjct: 277 -------------NSL--------VGRLIGKEGRNLKKIEEETGTKITISSLQDLTICNP 315
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+K+ AY +D
Sbjct: 316 ERTITVKGSLEACCKAEVEIMKKLKEAYEND 346
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S P + P ++ Y+ + GA+IGK G I +GA I+++ + P
Sbjct: 413 SAIPHQHSQQAPEQEVVYL--FIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAES--P 468
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
T+R+++I+GT + +A + KL E + ++V +T ++ VP+S+ G +IG
Sbjct: 469 DVTERMVIITGTPEAQFKAQGRIFGKLKEE-NFFSAKEEVKLETHIK--VPSSAAGRVIG 525
Query: 139 KAGATIKSFMDDSQAVIKISR 159
K G T+ + + A + + R
Sbjct: 526 KGGKTVNELQNLTSAEVIVPR 546
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G++IGK G IK + A IKI+ + + +R+V +TGT + Q +A
Sbjct: 431 LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESP--DVTERMVIITGTPEAQFKAQ 488
Query: 186 ELILLKLSEDTLYS 199
I KL E+ +S
Sbjct: 489 GRIFGKLKEENFFS 502
>gi|334343559|ref|XP_003341817.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Monodelphis
domestica]
Length = 367
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 125/289 (43%), Gaps = 48/289 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTGAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L +K LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRESPPKG 134
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
I H L L++ Q + + ++S+ S
Sbjct: 135 ATIPY--HPSLSLGTVLLSANQGFSVQGQYGTVTPAEVSKLQQLSG-------------- 178
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
H +P+ A P VP + + +T+S V ++ IG V+GR
Sbjct: 179 --HPVPF-ASPSVVPGL-------------------DPSAQTSSQEFLVPNDLIGCVIGR 216
Query: 275 GGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA IK+ ++ + G+ ER VTI+G SI A+ +I
Sbjct: 217 QGSKISEIRQMSGAHIKIGNQAE---GSGERHVTITGSPVSIALAQYLI 262
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G+ +R + I+
Sbjct: 193 DPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GSGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|327275834|ref|XP_003222677.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Anolis carolinensis]
Length = 576
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 36/317 (11%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S APVK P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 185 SGAPVKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA-- 237
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
G ++ I I T + A ++++ + E AD+V L+++ N+ G +IG
Sbjct: 238 GAAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIG 293
Query: 139 KAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE--- 194
K G +K D++ I IS L D + Y +R +T+ G+++ RA + I+ K+ E
Sbjct: 294 KEGRNLKKVEQDTETKITISSLQDLTLYN-PERTITVKGSIENCCRAEQEIMKKVREAYE 352
Query: 195 ---DTLYSQTMTVP-YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQN 250
+ Q+ +P A V G AVPPP +V + AA Y + +
Sbjct: 353 NDVAAMSLQSHLIPGLNLAAV---GLFPASSNAVPPPPSSV--SGAAPYSSFLPPEQ--- 404
Query: 251 NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
++ + + + +G ++G+ G++I ++S+ + A IK++ S R V I+
Sbjct: 405 ------ETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPAETPDSKV--RMVIIT 456
Query: 311 GPQRSIRTAESMIMQKV 327
GP + A+ I K+
Sbjct: 457 GPPEAQFKAQGRIYGKL 473
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISIHSTPEGCSA 255
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A ++IL + ++ ++T VP AH
Sbjct: 256 ACKMILEIMQKEAKDTKTAD--------------------------EVPLKILAH----- 284
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 285 ------NN---------------FVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNP 323
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV AY +D
Sbjct: 324 ERTITVKGSIENCCRAEQEIMKKVREAYEND 354
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 6 SSYVPSP--DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQ 63
S+ VP P V G AP S P E+ T F+ + + GA+IGK G I
Sbjct: 380 SNAVPPPPSSVSG---AAPYSSFL--PPEQETVHVFIPAQAV-GAIIGKKGQHIKQLSRF 433
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK 123
+ A I+++ + P + R+++I+G + +A + KL E + ++V +T
Sbjct: 434 ASASIKIAPAE--TPDSKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETH 490
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+R VP S+ G +IGK G T+ + + A + + R
Sbjct: 491 IR--VPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 524
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 37/302 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI D Q+ +++ + R G ++ I I T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCSA 258
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E + +D+ L+++ NS G +IGK G +K +D+ I
Sbjct: 259 ACRMILDIMQKEANETKTTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKIT 314
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---Y 206
IS L D + Y +R +T+ G++D +A I KL E + Q +P
Sbjct: 315 ISSLQDLTIYN-PERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGLNL 373
Query: 207 TYAGVFFSGFHGMPYGAVP-PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVAD 265
G+F SG +P A P VPAV A P + + +
Sbjct: 374 NALGIFSSGLPVLPPAAGPRSAVPAV----APQQAPEQ-------------EVVYLFIPT 416
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G++I +++ +GA IK++ +ER V I+G + A+ I
Sbjct: 417 QAVGALIGKKGQHIKQLAHFAGASIKIAPAES--PDVTERMVIITGTPEAQFKAQGRIFG 474
Query: 326 KV 327
K+
Sbjct: 475 KL 476
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P G RS P + P ++ Y+ + GA+IGK G I +GA I+++
Sbjct: 387 PPAAGPRSAVPAVAPQQAPEQEVVYL--FIPTQAVGALIGKKGQHIKQLAHFAGASIKIA 444
Query: 72 RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVP 129
+ P T+R+++I+GT + +A + KL E A+++ K + + VP
Sbjct: 445 PAES--PDVTERMVIITGTPEAQFKAQGRIFGKLKEENFFSAKEE-----VKLETHIKVP 497
Query: 130 NSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+S+ G +IGK G T+ + + A + + R
Sbjct: 498 SSAAGRVIGKGGKTVNELQNLTSAEVIVPR 527
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 45/205 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + +G +I +S + +R I + G+ID +
Sbjct: 282 LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNPERTITVKGSIDACCK 341
Query: 97 AVDLVIDKLLTELHAEDQA----------------------------------------- 115
A ++ I K L E + D A
Sbjct: 342 A-EVEITKKLREAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAVPAVA 400
Query: 116 -DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
+ + L +P + G++IGK G IK + A IKI+ + + +R+V +
Sbjct: 401 PQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESP--DVTERMVII 458
Query: 175 TGTLDEQMRALELILLKLSEDTLYS 199
TGT + Q +A I KL E+ +S
Sbjct: 459 TGTPEAQFKAQGRIFGKLKEENFFS 483
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TIK +Q+ + I R +++ G ++ +T+ T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENA--GAAEKPITIHSTPEGCSA 258
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL + ++ ++T +P AH
Sbjct: 259 ACRMILDIMQKEANETKTTE--------------------------DIPLKILAH----- 287
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NSL +G ++G+ GRN+ +I + +G +I +S D
Sbjct: 288 -------------NSL--------VGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNP 326
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE I +K+ AY +D
Sbjct: 327 ERTITVKGSIDACCKAEVEITKKLREAYEND 357
>gi|326496260|dbj|BAJ94592.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 689
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 86/172 (50%), Gaps = 26/172 (15%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IGK G TI Q+QSGA+IQ++R + PG+ R + ISGT D+I RA L
Sbjct: 149 IPNGRVGVIIGKAGETIKHLQAQSGAKIQVTRDMDVQPGSQTRSVDISGTPDQISRAEQL 208
Query: 101 VIDKLLTELHAEDQADDVGTKTKLRLIVP------------NSSCGSIIGKAGATIKSFM 148
+ID L AE A GT + + P N+ G +IGK G TIKS
Sbjct: 209 IIDVL-----AEADAGSSGTISNRKYNAPQPGAEQFQMQIANNKVGLVIGKGGETIKSMQ 263
Query: 149 DDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
SQA I++ L D S +R + + GT ++ A +L+ SE+
Sbjct: 264 AKSQARIQVIPLHLPPGDTS----TERTLYIDGTAEQIEIAKQLVSEVTSEN 311
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 51/212 (24%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+ TK ++ +PN G IIGKAG TIK S A I+++R G R V ++GT
Sbjct: 141 GSTTK-KIDIPNGRVGVIIGKAGETIKHLQAQSGAKIQVTRDMDVQPGSQTRSVDISGTP 199
Query: 179 DEQMRALELILLKLSE-DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
D+ RA +LI+ L+E D S T++
Sbjct: 200 DQISRAEQLIIDVLAEADAGSSGTIS-------------------------------NRK 228
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV----S 293
+ P G +FQ + +A+ +G V+G+GG I + S ARI+V
Sbjct: 229 YNAPQPGAEQFQ-----------MQIANNKVGLVIGKGGETIKSMQAKSQARIQVIPLHL 277
Query: 294 DRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
GD ++ER + I G I A+ ++ +
Sbjct: 278 PPGDT---STERTLYIDGTAEQIEIAKQLVSE 306
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I + + +G ++G+ G I + SGA+I+V+ D G+ R V ISG I AE
Sbjct: 147 IDIPNGRVGVIIGKAGETIKHLQAQSGAKIQVTRDMDVQPGSQTRSVDISGTPDQISRAE 206
Query: 321 SMIMQKVAYA 330
+I+ +A A
Sbjct: 207 QLIIDVLAEA 216
>gi|299471031|emb|CBN78891.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 737
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 13/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ LVSN +AG +IGKGG+ I + + + A I+++ + F+PGT +R++++ G +
Sbjct: 69 LKLLVSNSMAGTLIGKGGTRICEIKDECLADIKVTPNGRFYPGTHERVVLVVGEPGSVQM 128
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ-AVI 155
A D ++ + T A D R+++P+++ G IIG G + + A I
Sbjct: 129 ACDRIVTTIYT-------AADTSLDITQRVLIPDAASGLIIGHDGVRLGDLRQQAGVASI 181
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
++S D +R+VTL G + + L LI+ ++ EDT S+ + Y V
Sbjct: 182 QVSPRDMCTVA-GERVVTLQGPMSSVIHGLTLIVDRMMEDTTASRYQNMSTIYRAVH--- 237
Query: 216 FHGMPYGAVP 225
H PY AVP
Sbjct: 238 LHLPPY-AVP 246
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
V D +G ++G+GG + E+ Q+SGA+I ++ R +F GT R VT++G ++ A +
Sbjct: 666 VPDADVGIILGKGGATVRELQQLSGAKIMIARRNEFMPGTKHRLVTLAGAPLAVNMARFL 725
Query: 323 IMQKVAYASDRL 334
IM+K+ ++L
Sbjct: 726 IMRKIQTEKEKL 737
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G ++GKGG+T+ + Q SGA+I ++R +EF PGT R++ ++G + A L++ K+
Sbjct: 672 GIILGKGGATVRELQQLSGAKIMIARRNEFMPGTKHRLVTLAGAPLAVNMARFLIMRKIQ 731
Query: 107 TE 108
TE
Sbjct: 732 TE 733
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
L + V++ G ++G+GG I EI A IKV+ G F+ GT ER V + G S++
Sbjct: 69 LKLLVSNSMAGTLIGKGGTRICEIKDECLADIKVTPNGRFYPGTHERVVLVVGEPGSVQM 128
Query: 319 AESMIMQKVAYASDRLMD 336
A I+ + A+D +D
Sbjct: 129 ACDRIVTTIYTAADTSLD 146
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L VP++ G I+GK GAT++ S A I I+R + G RLVTL G A
Sbjct: 664 LPVPDADVGIILGKGGATVRELQQLSGAKIMIARRNEFMPGTKHRLVTLAGAPLAVNMAR 723
Query: 186 ELILLKLSED 195
LI+ K+ +
Sbjct: 724 FLIMRKIQTE 733
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 138/301 (45%), Gaps = 32/301 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI D Q+ +++ + R G ++ I I T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENA--GAAEKPITIHSTPEGCSA 258
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E + +D+ L+++ NS G +IGK G +K +D+ I
Sbjct: 259 ACRMILDIMQKEANETKTTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKIT 314
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---Y 206
IS L D + Y +R +T+ G++D +A I KL E + Q +P
Sbjct: 315 ISSLQDLTIYN-PERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGLNL 373
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
G+F SG +P A PP +P ++ P M Q+ + L I +
Sbjct: 374 NALGIFSSGLPVLPPAAGPP--TRIPPSS-----PEMS----QSAPEQEVVYLFI--PTQ 420
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+G ++G+ G++I +++ +GA IK++ +ER V I+G + A+ I K
Sbjct: 421 AVGALIGKKGQHIKQLAHFAGASIKIAPAES--PDVTERMVIITGTPEAQFKAQGRIFGK 478
Query: 327 V 327
+
Sbjct: 479 L 479
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 48/208 (23%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + +G +I +S + +R I + G+ID +
Sbjct: 282 LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNPERTITVKGSIDACCK 341
Query: 97 AVDLVIDKLLTELHAED------QADDV----------------------GTKTKL---- 124
A ++ I K L E + D QA+ + G T++
Sbjct: 342 A-EVEITKKLREAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPPTRIPPSS 400
Query: 125 -------------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
L +P + G++IGK G IK + A IKI+ + + +R+
Sbjct: 401 PEMSQSAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESP--DVTERM 458
Query: 172 VTLTGTLDEQMRALELILLKLSEDTLYS 199
V +TGT + Q +A I KL E+ +S
Sbjct: 459 VIITGTPEAQFKAQGRIFGKLKEENFFS 486
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P ++ Y+ + GA+IGK G I +GA I+++ + P T+R+++I
Sbjct: 406 SAPEQEVVYL--FIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAES--PDVTERMVII 461
Query: 88 SGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+GT + +A + KL E A+++ K + + VP+S+ G +IGK G T+
Sbjct: 462 TGTPEAQFKAQGRIFGKLKEENFFSAKEE-----VKLETHIKVPSSAAGRVIGKGGKTVN 516
Query: 146 SFMDDSQAVIKISR 159
+ + A + + R
Sbjct: 517 ELQNLTSAEVIVPR 530
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TIK +Q+ + I R +++ G ++ +T+ T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENA--GAAEKPITIHSTPEGCSA 258
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL + ++ ++T +P AH
Sbjct: 259 ACRMILDIMQKEANETKTTE--------------------------DIPLKILAH----- 287
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NSL +G ++G+ GRN+ +I + +G +I +S D
Sbjct: 288 -------------NSL--------VGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNP 326
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE I +K+ AY +D
Sbjct: 327 ERTITVKGSIDACCKAEVEITKKLREAYEND 357
>gi|328724001|ref|XP_001949471.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 443
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 142/321 (44%), Gaps = 49/321 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ VIGKGG + SGA++ +S T + I+ I+GT + I +
Sbjct: 30 MRILIDRREVRNVIGKGGES-------SGAKVLISGGQ-----TRESIVSITGTTNAICK 77
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +L+ L E E Q T L+LIVP S CG IIGK G IK + S A I+
Sbjct: 78 ATELI--GLKVEEFFERQNGPKAFLT-LKLIVPISQCGFIIGKGGCKIKEIRESSGAAIQ 134
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY---------- 206
++ LD +RLV++TGT + + + + S+ T+PY
Sbjct: 135 VA-LDM-LPNSTERLVSITGTTGTISQCVYQVCNVILNSP--SRKATIPYDPRRKTLGFA 190
Query: 207 -TYAGVFFS-------------GFHGMPYGAVPPPVPAVPHNTAAHYGP----NMGGRKF 248
+ G F G + G++ P A + G N GG
Sbjct: 191 SSAVGTDFGRQCINPLASLAALGLGTVSTGSINPATLAALAGSQLRTGNRQNRNGGGEHK 250
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGTSERK 306
N + + ++++ V + IG V+GR G I EI Q+SGA + ++ +R +R+
Sbjct: 251 NQNSNSNSETISMTVPNVLIGCVIGRRGSKIAEIKQLSGALVYIAKGERTHENGENEDRQ 310
Query: 307 VTISGPQRSIRTAESMIMQKV 327
+TI+G + SI A+ +I V
Sbjct: 311 ITITGNKDSISVAKYLIEMSV 331
>gi|403418461|emb|CCM05161.1| predicted protein [Fibroporia radiculosa]
Length = 326
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 38/287 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGK G + D + +G + +S+ PG +R++ +SG+++ + +
Sbjct: 30 LRALVSTKDAGVIIGKAGKNVADLRDHTGVKAGVSK---VVPGVHERVLTVSGSVEGVAK 86
Query: 97 AVDLVIDKLLT-ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ +L++ + + T +RL++ ++ GS+IG+ G IK+ D S A +
Sbjct: 87 AYALIVSQLVSANPSSPVSPNSPPPNTAIRLLISHNLMGSVIGRNGLKIKAIQDASGARM 146
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
S+ L S +R+V + G+ + RA+E I L ED Q + + +G
Sbjct: 147 VASKDMLPQS----TERIVEVQGSSESIGRAIEEIGRCLLEDWERGQGTVLFHPGSGDER 202
Query: 214 SG---------FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
SG ++G P P P Q + RT +++I
Sbjct: 203 SGRRSSNASRRYNGDAGRGRTSPSPNAP---------------LQQPTNLRTQNISI--P 245
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
+ +G ++GR G I EI ++SG++I ++ + T ER TI G
Sbjct: 246 SDMVGCIIGRNGTKITEIRRLSGSKISIAK--EPHDETGERMFTIVG 290
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 44/201 (21%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T IR L+S+ L G+VIG+ G I Q SGAR+ S+ + P +T+RI+ + G+ + I
Sbjct: 113 TAIRLLISHNLMGSVIGRNGLKIKAIQDASGARMVASK--DMLPQSTERIVEVQGSSESI 170
Query: 95 LRAVDLVIDKLLTE---------LHAEDQADDVGTK------------------------ 121
RA++ + LL + H + G +
Sbjct: 171 GRAIEEIGRCLLEDWERGQGTVLFHPGSGDERSGRRSSNASRRYNGDAGRGRTSPSPNAP 230
Query: 122 ----TKLR---LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
T LR + +P+ G IIG+ G I S + I I++ H G +R+ T+
Sbjct: 231 LQQPTNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETG--ERMFTI 288
Query: 175 TGTLDEQMRALELILLKLSED 195
GT + +AL L+ +L +
Sbjct: 289 VGTPEANEKALFLLYNQLESE 309
>gi|238883031|gb|EEQ46669.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 365
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 36/302 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG G I+ ++++ + +SR PG+ +RI+ +SG +D+ +A
Sbjct: 72 RVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISR---LIPGSHERILTVSGKLDDCAKA 128
Query: 98 VDLVIDKLLTE---------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
+ L+ L + T LRL++PNS G++IG GA I+
Sbjct: 129 LSYFAQALINANIESYNYFPLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQQLQ 188
Query: 149 DDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSED--TLYSQTMTV 204
++ IS + + G N+RLV L GT+D+ +L +I L ED ++ T V
Sbjct: 189 NN----FNISMIASKSFLPGSNERLVELQGTVDDLYDSLRIISRCLIEDFSSIVGTTYYV 244
Query: 205 PYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
P G Y +NT + N + + T+ TI
Sbjct: 245 P-----------RGNTYNNSHSHSHNNNNNTNTNNNNNNNNNTHGSGGNKTTD--TISFP 291
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
++ +G ++G+ G I + ++SGA I +S+ G +ER TI+G ++ A+ MI
Sbjct: 292 NDIVGALIGKRGSRIDGVRKVSGAMIAISEA---IEGENERVFTITGSSHAVDKAKQMIY 348
Query: 325 QK 326
Q
Sbjct: 349 QN 350
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 53/210 (25%)
Query: 22 PVKSLSSDP-TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P+K LSS P TE+ T +R L+ N G +IG G+ I Q Q+ I + S F PG+
Sbjct: 148 PLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQ--QLQNNFNISMIASKSFLPGS 205
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------------- 120
+R++ + GT+D++ ++ ++++ ED + VGT
Sbjct: 206 NERLVELQGTVDDLYDSL-----RIISRCLIEDFSSIVGTTYYVPRGNTYNNSHSHSHNN 260
Query: 121 ----------------------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
KT + PN G++IGK G+ I S A+I IS
Sbjct: 261 NNNTNTNNNNNNNNNTHGSGGNKTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIAIS 320
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
+ G N+R+ T+TG+ +A ++I
Sbjct: 321 ---EAIEGENERVFTITGSSHAVDKAKQMI 347
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 133/295 (45%), Gaps = 26/295 (8%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA+IG+ G+TI QS AR+ + R G+ ++ I I G + A +++
Sbjct: 86 MVGAIIGRQGTTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTNACKRILEV 143
Query: 105 LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHS 163
+ E + ++ + L+++ N+ G IIGK+G TIK M D+ I +S + D +
Sbjct: 144 MQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN 198
Query: 164 YYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGA 223
+ L +R++T+ G ++ RA I KL + P + + F G H M +
Sbjct: 199 SFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPGLHPMAMMS 254
Query: 224 VP---------PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
P P P+ + ++ F N+ + T + + + +G ++G
Sbjct: 255 TPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPAFPNDMQETT---FLYIPNNAVGAIIGT 311
Query: 275 GGRNIMEISQISGARIKVS--DRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I I + S A +K++ D +ERKVTI G A+ MI +K+
Sbjct: 312 KGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM 366
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 130/342 (38%), Gaps = 106/342 (30%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G+TI + +I +S ++ +RII + G I+ + R
Sbjct: 158 LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGLIENMSR 217
Query: 97 AVDLVIDKLLTELHAEDQA------------------------------------DDVGT 120
A + + KL + QA +
Sbjct: 218 AENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMS 277
Query: 121 KTKLRLIVP---------------NSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHS 163
KT ++ P N++ G+IIG G+ I+S M S A +KI+ L D
Sbjct: 278 KTPASVVPPAFPNDMQETTFLYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKP 337
Query: 164 YYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGA 223
+R VT+ GT + Q +A +I K+ E+ GF
Sbjct: 338 LDQQTERKVTIVGTPEGQWKAQYMIFEKMREE-------------------GF------- 371
Query: 224 VPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
M G DD ++ + VA +G ++G+GG+N+ E+
Sbjct: 372 -------------------MCG------TDDVRLTVELLVASSQVGRIIGKGGQNVRELQ 406
Query: 284 QISGARIKVSDR--GDFFSGTSERKVTISGPQRSIRTAESMI 323
+++G+ IK+ + G E V I GP S+++A+ I
Sbjct: 407 RVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRI 448
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 167/393 (42%), Gaps = 82/393 (20%)
Query: 7 SYVPSPDV-HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGA--VIGKGGSTINDFQSQ 63
+Y P P H ++ P+ + ++ PTY+ F + P+ A VIGK G IN + +
Sbjct: 171 AYDPVPFANHLDYTSRPMANHQAERELDPTYVSFRMYCPVKEASFVIGKRGDMINHLREK 230
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT- 122
+ ARIQ+S E +RII++ G + + +A L+ +L E ED+ + ++
Sbjct: 231 ANARIQVS---ENIKDVQERIILVKGPAENVAKAFGLITRAILEE--PEDEPASIMSRQY 285
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
L++++P+ G IIGK G+ + ++S A +K + + DR++++ G D
Sbjct: 286 NLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLKAA--EQPLPNSTDRVLSVLGVGDAIH 343
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAG--VFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
A+ I + E + + Y G + G+ +P+NT + G
Sbjct: 344 IAIYYISQVIIEHKDILKKHKIVYYTPGNNQLMNNTMGL-----------IPNNTYGNTG 392
Query: 241 -----PNMGGRKFQNN------------------------KDDRTNSLT----------- 260
P GG FQ+N D+ N++
Sbjct: 393 IIGNDPIQGGAPFQHNYQRQFQPSAPSHNQITTPVPTQLYTDEHGNTMIGDVITSVPVPA 452
Query: 261 ----------IGVADEHIGFVVGRGGRNIMEISQISGA---RIKVSDRGDFFSG-----T 302
+ VA+ +IG V+G+GG NI +I + SG +I+ G T
Sbjct: 453 GTGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCSYVKIEPDQHQTIMLGRGRGLT 512
Query: 303 SERKVTISGPQRSIRTAESMIMQKVAYASDRLM 335
S RK+T++G I+TA +I Q++ +R M
Sbjct: 513 SIRKLTLTGSINLIQTAIYLINQRIVADKERNM 545
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 20/176 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K Q +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ L +S +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 138 CSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 187
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
V+++ IG ++G+GG I EI QISGA I++S+ + G ++R +TISG S+ A+ +
Sbjct: 296 VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYL 355
Query: 323 IMQKVAYASDRL 334
I +++ + L
Sbjct: 356 INMRISMETAGL 367
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A L
Sbjct: 296 VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYL 355
Query: 101 V 101
+
Sbjct: 356 I 356
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 294 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 353
Query: 186 ELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGM-PYGAVPPPV 228
LI +++S +T AG+ G+H + P V P+
Sbjct: 354 YLINMRISMET------------AGLPIPGYHYIAPSAIVKTPI 385
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 20/176 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K Q +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ L +S +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 138 CSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 187
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
V+++ IG ++G+GG I EI QISGA I++S+ + G ++R +TISG S+ A+ +
Sbjct: 308 VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYL 367
Query: 323 IMQKVAYASDRLMD 336
I V L++
Sbjct: 368 INMSVELQKANLLE 381
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 305 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 364
Query: 98 VDLV 101
L+
Sbjct: 365 QYLI 368
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 305 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 364
Query: 185 LELILL--KLSEDTLYSQTMT 203
LI + +L + L Q +
Sbjct: 365 QYLINMSVELQKANLLEQAQS 385
>gi|45384194|ref|NP_990402.1| insulin-like growth factor 2 mRNA-binding protein 1 [Gallus gallus]
gi|82227598|sp|O42254.1|IF2B1_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1; AltName: Full=Zip code-binding protein
1; Short=ZBP-1; Short=Zipcode-binding protein 1
gi|2570921|gb|AAB82295.1| zipcode-binding protein [Gallus gallus]
Length = 576
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 147/315 (46%), Gaps = 36/315 (11%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APVK P + P +R LV GA+IGK G+TI + Q+ ++I + R G
Sbjct: 187 APVKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GA 239
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I I T + A ++++ + E AD+V L+++ N+ G +IGK
Sbjct: 240 AEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIGKE 295
Query: 141 GATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE----- 194
G +K D++ I IS L D + Y +R +T+ G+++ +A + I+ K+ E
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTLYN-PERTITVKGSIENCCKAEQEIMKKVREAYEND 354
Query: 195 -DTLYSQTMTVP-YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNK 252
+ Q+ +P A V G AVPPP +V + AA Y M +
Sbjct: 355 VAAMSLQSHLIPGLNLAAV---GLFPASSNAVPPPPSSV--SGAAPYSSFMPPEQ----- 404
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
++ + + + +G ++G+ G++I ++S+ + A IK++ S R V I+GP
Sbjct: 405 ----ETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVVITGP 458
Query: 313 QRSIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 459 PEAQFKAQGRIYGKL 473
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISIHSTPEGCSA 255
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A ++IL + ++ ++T VP AH
Sbjct: 256 ACKMILEIMQKEAKDTKTAD--------------------------EVPLKILAH----- 284
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 285 ------NN---------------FVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNP 323
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV AY +D
Sbjct: 324 ERTITVKGSIENCCKAEQEIMKKVREAYEND 354
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 6 SSYVPSP--DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQ 63
S+ VP P V G AP S P E+ T F+ + + GA+IGK G I
Sbjct: 380 SNAVPPPPSSVSG---AAPYSSFM--PPEQETVHVFIPAQAV-GAIIGKKGQHIKQLSRF 433
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK 123
+ A I+++ P + R+++I+G + +A + KL E + ++V +T
Sbjct: 434 ASASIKIAPPE--TPDSKVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETH 490
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+R VP S+ G +IGK G T+ + + A + + R
Sbjct: 491 IR--VPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 524
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 20/176 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG-----SCPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K Q +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ L +S +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 138 CSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 187
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
V+++ IG ++G+GG I EI QISGA I++S+ + G ++R +TISG S+ A+ +
Sbjct: 343 VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYL 402
Query: 323 IMQKVAYASDRL 334
I +++ + L
Sbjct: 403 INMRISMETAGL 414
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A L
Sbjct: 343 VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYL 402
Query: 101 V 101
+
Sbjct: 403 I 403
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 340 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 399
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 400 QYLINMRISMET------------AGLPIPGYH 420
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 61/311 (19%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI------ 91
R L + L G+VIGK G+ IN + Q+ A++++ + +PG R+I++ +
Sbjct: 44 RILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVV---DPYPGADKRVILVYCYVKHRDLD 100
Query: 92 -------------DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
D +LR + ++D L H + D + ++VP S ++IG
Sbjct: 101 AEVDDNEPVCAAQDALLRVHNAIVDTL----HRNRRDSDKKNTEEANILVPASQASNVIG 156
Query: 139 KAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL----ELIL 189
K+GA IK S+A IK+S D HS D V +TG + +AL +I
Sbjct: 157 KSGAVIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGVSTIIY 216
Query: 190 LKLSEDTLYSQT--------MTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
S++ + +T + +P S F+ P A+P P++ + H+ P
Sbjct: 217 KHPSKENIPLETSIPEPTPSIIIPSELPVYPASNFYSAPDAAIPSVHPSLSILGSTHHVP 276
Query: 242 NMG------GR------------KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+ GR + K + IG V+GRGG I I
Sbjct: 277 ELALPADDHGRLPIYPSILPVIPTYSAPKCSGELEFRVLCPSGKIGLVIGRGGATIKNIR 336
Query: 284 QISGARIKVSD 294
Q SGARI V D
Sbjct: 337 QESGARIDVDD 347
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 135/313 (43%), Gaps = 54/313 (17%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT--IDEIL 95
R L + G VIG+GG+TI + + +SGARI + + + II I+ T ID++
Sbjct: 313 RVLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKN---DREESIITITSTEAIDDVK 369
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A + LL + D DD + LRL+VPN G +IG+ G+ + ++A I
Sbjct: 370 SAAVEAV--LLLQAKINDYEDD---RMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI 424
Query: 156 KISRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
IS+ D +D LV ++G D+ AL I+L+L ED L + G
Sbjct: 425 LISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREDVLKESVESQNSDRDGKLTV 484
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD----DRTN------------- 257
YG+ +PHN P R+ ++ + RT+
Sbjct: 485 ATSDSLYGSSLSLPALLPHN--PQIAPLSYDRRGESERALEVFPRTSSYGYSSMQVTDDG 542
Query: 258 -----SLTIGVADEH------------IGFVVGRGGRNIMEISQISGARIKV----SDRG 296
S T +EH + V+G+ G N+ I +ISGA I++ S R
Sbjct: 543 YGGLPSYTSKAYEEHLPRDEMTIPASGLSKVMGKRGTNLDNIRKISGAHIEIIESKSSRH 602
Query: 297 D---FFSGTSERK 306
D + SGTSE++
Sbjct: 603 DHIAYISGTSEQR 615
>gi|322698027|gb|EFY89801.1| hypothetical protein MAC_04233 [Metarhizium acridum CQMa 102]
Length = 456
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 155/368 (42%), Gaps = 89/368 (24%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG
Sbjct: 109 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGI----- 160
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A L+I L E E A +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 161 -AFGLIIRTLNNEPLGE--ASTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 217
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRAL----ELILLKLSED------TLYSQTMTV 204
+ S D ++R + + G D A +L +L+E + Y+
Sbjct: 218 LNAS--DSCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRSGA 275
Query: 205 PYTYAGVFFSGFHGMPYGAVP------------------------------------PPV 228
P AG G +PY P PP
Sbjct: 276 P---AGSIPGGMQVVPYSPQPASGHYGRPENYGRHQDRRAHHMPPAAYPPHYPHNAAPPN 332
Query: 229 PAV--------------PHNTAAHYGPNMG--------GRKFQNNKDDRTNSLTIGVADE 266
PA+ PH T H P++G G Q+ + I + ++
Sbjct: 333 PAMPMQYGGQQAAYGGAPHAT-QHMPPHVGPQPHGGPQGPPMQHGMPGGPLTQQIYIPND 391
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+G ++G+GG+ I EI Q+SG+ IK+++ D ++ER VTI+G + R A M+ +
Sbjct: 392 MVGAIIGKGGQKINEIRQMSGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLYSR 448
Query: 327 VAYASDRL 334
+ R+
Sbjct: 449 LESEKHRV 456
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 12 PDVHGKRSTAPVK-SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
P HG P++ + P + YI N + GA+IGKGG IN+ + SG+ I++
Sbjct: 362 PQPHGGPQGPPMQHGMPGGPLTQQIYI----PNDMVGAIIGKGGQKINEIRQMSGSVIKI 417
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 418 NEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 454
>gi|71988878|ref|NP_001022696.1| Protein M88.5, isoform b [Caenorhabditis elegans]
gi|51011788|emb|CAH10787.1| Protein M88.5, isoform b [Caenorhabditis elegans]
Length = 704
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 122/276 (44%), Gaps = 32/276 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARI---QLSRSHEFFPGTTDRIIMISGTIDE 93
IR +V +IG GSTI D S + R+ LS+ G DRI+ + G ++
Sbjct: 189 IRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDFVNLSKKERTVLGNNDRILTVHGVAEQ 248
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++D + +E +D +VG T LR+ N CG +IGKAG++IK M +
Sbjct: 249 ATKAVARILDVIQSEAVKDDV--NVGADTVLRMRAHNQLCGRLIGKAGSSIKEIMQKTGT 306
Query: 154 VIKISRL-----------DHSYYGLNDRLVTLTG-TLDEQMRALELILLKL-----SEDT 196
I +++ + GL +R + + G +++ ++A LI KL S+
Sbjct: 307 NITVTKYIEPPGGISGLTANELLGLMERTIMVRGPSIEAVVQAEALISAKLKKCYESDSQ 366
Query: 197 LYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRT 256
L +Q+M P + G AV +A H+ P G
Sbjct: 367 LRAQSMQCPMPPMMMPPILPPGASSSAV----------SAPHFIPTPPGVLQIQPGTTNL 416
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ + V D IG ++G G+NI I + +GA +K+
Sbjct: 417 RQVRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKI 452
>gi|168026870|ref|XP_001765954.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682860|gb|EDQ69275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 770
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ V N G VIGKGG TI Q QSGARIQ++R E P ++ R + + GT ++I RA
Sbjct: 311 KIEVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTPEQISRA 370
Query: 98 VDLVIDKLLTELHA-------EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
LV D ++ E ++ ++++ VPN+ G IIG+ G TIKS
Sbjct: 371 EQLVKD-VIAEASTGAPGGAFGGRSFGGHGGEQVQIKVPNNKVGLIIGRGGETIKSLQSR 429
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
S A I++ + G +R+VTL G A ELI
Sbjct: 430 SGARIQVQNDSETEPGATERVVTLIGIKKVTDMAYELI 467
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 78/193 (40%), Gaps = 42/193 (21%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ VPNS G +IGK G TIK S A I+++R S + R V L GT
Sbjct: 305 GPHESRKIEVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTP 364
Query: 179 DEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAH 238
++ RA +L+ ++E + G P GA
Sbjct: 365 EQISRAEQLVKDVIAEAST--------------------GAPGGAF-------------- 390
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
++ + I V + +G ++GRGG I + SGARI+V + +
Sbjct: 391 --------GGRSFGGHGGEQVQIKVPNNKVGLIIGRGGETIKSLQSRSGARIQVQNDSET 442
Query: 299 FSGTSERKVTISG 311
G +ER VT+ G
Sbjct: 443 EPGATERVVTLIG 455
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDE 93
++ V N G +IG+GG TI QS+SGARIQ+ E PG T+R++ + G D
Sbjct: 403 VQIKVPNNKVGLIIGRGGETIKSLQSRSGARIQVQNDSETEPGATERVVTLIGIKKVTDM 462
Query: 94 ILRAVDLVIDKLLTEL 109
+ VID+L L
Sbjct: 463 AYELIKEVIDELAASL 478
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD 297
H P G ++ N S I V + +G V+G+GG I + SGARI+V+ G+
Sbjct: 290 HQPPQHGSHQYYNQGGPH-ESRKIEVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGE 348
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQKVAYAS 331
+S R+V + G I AE ++ +A AS
Sbjct: 349 SDPRSSTRQVELMGTPEQISRAEQLVKDVIAEAS 382
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 138/317 (43%), Gaps = 37/317 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI D Q+ +++ + R G ++ I I T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENA--GAAEKPITIHSTPEGCSA 258
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E + +D+ L+++ NS G +IGK G +K +D+ I
Sbjct: 259 ACRMILDIMQKEANETKTTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKIT 314
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---Y 206
IS L D + Y +R +T+ G++D +A I KL E + Q +P
Sbjct: 315 ISSLQDLTIYN-PERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGLNL 373
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF----------------QN 250
G+F SG +P A P AVP A Y P + +
Sbjct: 374 NALGIFSSGLPVLPPAA--GPRSAVPAVAPAGYNPFLSHSSHLSGLYGVPPASAIPHQHS 431
Query: 251 NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
+ + + + + +G ++G+ G++I +++ +GA IK++ +ER V I+
Sbjct: 432 QQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAES--PDVTERMVIIT 489
Query: 311 GPQRSIRTAESMIMQKV 327
G + A+ I K+
Sbjct: 490 GTPEAQFKAQGRIFGKL 506
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S P + P ++ Y+ + GA+IGK G I +GA I+++ + P
Sbjct: 424 SAIPHQHSQQAPEQEVVYL--FIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAES--P 479
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSI 136
T+R+++I+GT + +A + KL E A+++ K + + VP+S+ G +
Sbjct: 480 DVTERMVIITGTPEAQFKAQGRIFGKLKEENFFSAKEE-----VKLETHIKVPSSAAGRV 534
Query: 137 IGKAGATIKSFMDDSQAVIKISR 159
IGK G T+ + + A + + R
Sbjct: 535 IGKGGKTVNELQNLTSAEVIVPR 557
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TIK +Q+ + I R +++ G ++ +T+ T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENA--GAAEKPITIHSTPEGCSA 258
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL + ++ ++T +P AH
Sbjct: 259 ACRMILDIMQKEANETKTTE--------------------------DIPLKILAH----- 287
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NSL +G ++G+ GRN+ +I + +G +I +S D
Sbjct: 288 -------------NSL--------VGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNP 326
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE I +K+ AY +D
Sbjct: 327 ERTITVKGSIDACCKAEVEITKKLREAYEND 357
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G++IGK G IK + A IKI+ + + +R+V +TGT + Q +A
Sbjct: 442 LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESP--DVTERMVIITGTPEAQFKAQ 499
Query: 186 ELILLKLSEDTLYS 199
I KL E+ +S
Sbjct: 500 GRIFGKLKEENFFS 513
>gi|156375798|ref|XP_001630266.1| predicted protein [Nematostella vectensis]
gi|156217283|gb|EDO38203.1| predicted protein [Nematostella vectensis]
Length = 688
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 46/288 (15%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF-FPGTTDRIIMISGTIDEILRAVD 99
+ N G VIG+GG IN QS++GARIQ++ DR + I GT+ + +A
Sbjct: 163 IPNKYVGLVIGRGGEQINKLQSETGARIQVAPDPPAGMMSPPDRSVTIGGTVQAVEKA-K 221
Query: 100 LVIDKLLTELHAEDQADDVGT----KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
V++K+ E D V + + +++P S G IIGK G TIK+ + +Q +
Sbjct: 222 QVLNKICEEGKIPDSLMSVPVVAPGEQVIEMMIPASKVGLIIGKGGETIKNLQERAQCRM 281
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+ + D Y ++ + + G R +L+ L+E L + +
Sbjct: 282 VMVQ-DGPYANAPEKPLRIMGDNTRCQRGKDLVTDLLTEKELEQSKPALDF--------- 331
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+G R Q+N+ +L I V + +GFV+G+G
Sbjct: 332 ---------------------------LGKR--QDNRQLGATTLEIPVPRDVVGFVIGKG 362
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I I SGAR++ + D +S+R T+ G Q I+ E +I
Sbjct: 363 GETIKRIQAESGARVQFNPAKD-NPNSSDRMATVQGSQEQIQKVEKII 409
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + V + G VIGKGG TI Q++SGAR+Q + + + P ++DR+ + G+ ++I
Sbjct: 344 TTLEIPVPRDVVGFVIGKGGETIKRIQAESGARVQFNPAKD-NPNSSDRMATVQGSQEQI 402
Query: 95 LRAVDLVIDKLLTELHA---------EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ V+ +I+++++++ + A+ G T L + VP + CG IIGK G TIK
Sbjct: 403 QK-VEKIINEIISQVESRQRGGPPPRGPPANMPGINT-LEMPVPGNKCGLIIGKGGETIK 460
Query: 146 SFMDDSQAVIKISR 159
+ S A ++++R
Sbjct: 461 QIIAVSGAHVELNR 474
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 128/317 (40%), Gaps = 59/317 (18%)
Query: 25 SLSSDPTEKP--TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
SL S P P I ++ G +IGKGG TI + Q ++ R+ + + + +
Sbjct: 236 SLMSVPVVAPGEQVIEMMIPASKVGLIIGKGGETIKNLQERAQCRMVMVQDGPYA-NAPE 294
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTELHAEDQA---DDVGTK--------TKLRLIVPNS 131
+ + I G R DLV D LLTE E D +G + T L + VP
Sbjct: 295 KPLRIMGDNTRCQRGKDLVTD-LLTEKELEQSKPALDFLGKRQDNRQLGATTLEIPVPRD 353
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
G +IGK G TIK +S A ++ + + +DR+ T+ G+ EQ++ +E I+
Sbjct: 354 VVGFVIGKGGETIKRIQAESGARVQFNPAKDNPNS-SDRMATVQGS-QEQIQKVEKII-- 409
Query: 192 LSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNN 251
+ + SQ + NM G
Sbjct: 410 ---NEIISQVESRQRGGP-------------------------PPRGPPANMPG------ 435
Query: 252 KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
N+L + V G ++G+GG I +I +SGA ++++ + + I G
Sbjct: 436 ----INTLEMPVPGNKCGLIIGKGGETIKQIIAVSGAHVELNR--NVPENNPTKFFVIRG 489
Query: 312 PQRSIRTAESMIMQKVA 328
+ I+ AE MI +K++
Sbjct: 490 TDQQIQQAEKMINEKIS 506
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVS-DRGDFFSGTSERKVTISGPQRSIRTA 319
+ + ++++G V+GRGG I ++ +GARI+V+ D +R VTI G +++ A
Sbjct: 161 VKIPNKYVGLVIGRGGEQINKLQSETGARIQVAPDPPAGMMSPPDRSVTIGGTVQAVEKA 220
Query: 320 ESMI 323
+ ++
Sbjct: 221 KQVL 224
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 141/310 (45%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 184
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A++V L+++ N G +IGK G +K ++ I
Sbjct: 185 ACRMILEIMQKEADETKLAEEV----PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKIT 240
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 241 ISSLQDLSIYN-PERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNL 299
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP--HNTAAH-------YGPNMGGRKFQNNKDDRTN 257
+ G+F +G +P A P VP P H A H Y + G ++
Sbjct: 300 SALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQE 359
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
++++ + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 360 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 417
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 418 KAQGRIFGKL 427
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 184
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ VP AH G
Sbjct: 185 ACRMILEIMQKEADETKLAEE-----------------------------VPLKILAHNG 215
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 216 --------------------------FVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 249
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 250 YNPERTITVRGTIEACANAEIEIMKKLREAFENDML 285
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 361 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 418
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 419 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 475
Query: 157 ISR 159
+ R
Sbjct: 476 VPR 478
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 363 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 420
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 421 GRIFGKLKEENFFN 434
>gi|71988874|ref|NP_001022695.1| Protein M88.5, isoform a [Caenorhabditis elegans]
gi|29603322|emb|CAA84338.2| Protein M88.5, isoform a [Caenorhabditis elegans]
Length = 828
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 122/276 (44%), Gaps = 32/276 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARI---QLSRSHEFFPGTTDRIIMISGTIDE 93
IR +V +IG GSTI D S + R+ LS+ G DRI+ + G ++
Sbjct: 313 IRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDFVNLSKKERTVLGNNDRILTVHGVAEQ 372
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++D + +E +D +VG T LR+ N CG +IGKAG++IK M +
Sbjct: 373 ATKAVARILDVIQSEAVKDDV--NVGADTVLRMRAHNQLCGRLIGKAGSSIKEIMQKTGT 430
Query: 154 VIKISRL-----------DHSYYGLNDRLVTLTG-TLDEQMRALELILLKL-----SEDT 196
I +++ + GL +R + + G +++ ++A LI KL S+
Sbjct: 431 NITVTKYIEPPGGISGLTANELLGLMERTIMVRGPSIEAVVQAEALISAKLKKCYESDSQ 490
Query: 197 LYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRT 256
L +Q+M P + G AV +A H+ P G
Sbjct: 491 LRAQSMQCPMPPMMMPPILPPGASSSAV----------SAPHFIPTPPGVLQIQPGTTNL 540
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ + V D IG ++G G+NI I + +GA +K+
Sbjct: 541 RQVRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKI 576
>gi|326934067|ref|XP_003213117.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Meleagris gallopavo]
Length = 553
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 36/315 (11%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APVK P + P +R LV GA+IGK G+TI + Q+ ++I + R G
Sbjct: 164 APVKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GA 216
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I I T + A ++++ + E AD+V L+++ N+ G +IGK
Sbjct: 217 AEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIGKE 272
Query: 141 GATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE----- 194
G +K D++ I IS L D + Y +R +T+ G+++ +A + I+ K+ E
Sbjct: 273 GRNLKKVEQDTETKITISSLQDLTLYN-PERTITVKGSIENCCKAEQEIMKKVREAYEND 331
Query: 195 -DTLYSQTMTVP-YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNK 252
+ Q+ +P A V G AVPPP +V + AA Y M
Sbjct: 332 VAAMSLQSHLIPGLNLAAV---GLFPASSNAVPPPPSSV--SGAAPYSSFM--------- 377
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
++ + + + +G ++G+ G++I ++S+ + A IK++ S R V I+GP
Sbjct: 378 PPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVVITGP 435
Query: 313 QRSIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 436 PEAQFKAQGRIYGKL 450
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 175 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISIHSTPEGCSA 232
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A ++IL + ++ ++T VP AH
Sbjct: 233 ACKMILEIMQKEAKDTKTAD--------------------------EVPLKILAH----- 261
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 262 ------NN---------------FVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNP 300
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV AY +D
Sbjct: 301 ERTITVKGSIENCCKAEQEIMKKVREAYEND 331
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 6 SSYVPSP--DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQ 63
S+ VP P V G AP S P E+ T F+ + + GA+IGK G I
Sbjct: 357 SNAVPPPPSSVSG---AAPYSSFM--PPEQETVHVFIPAQAV-GAIIGKKGQHIKQLSRF 410
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK 123
+ A I+++ P + R+++I+G + +A + KL E + ++V +T
Sbjct: 411 ASASIKIAPPE--TPDSKVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETH 467
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+R VP S+ G +IGK G T+ + + A + + R
Sbjct: 468 IR--VPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 501
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 152/346 (43%), Gaps = 34/346 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 164 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 223
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 224 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 279
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 280 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 336
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 337 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 396
Query: 231 VP--HNTAAH-------YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
P H A H Y + G ++ ++++ + + +G ++G+ G +I +
Sbjct: 397 SPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQ 456
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 457 LARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 500
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 200 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 257
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ VP AH G
Sbjct: 258 ACRMILEIMQKEADETKLAEE-----------------------------VPLKILAHNG 288
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 289 --------------------------FVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 322
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 323 YNPERTITVRGTIEACANAEIEIMKKLREAFENDML 358
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 434 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 491
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 492 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 548
Query: 157 ISR 159
+ R
Sbjct: 549 VPR 551
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 436 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 493
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 494 GRIFGKLKEENFFN 507
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 152/346 (43%), Gaps = 34/346 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 104 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 163
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 164 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 219
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 220 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 276
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 277 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 336
Query: 231 VP--HNTAAH-------YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
P H A H Y + G ++ ++++ + + +G ++G+ G +I +
Sbjct: 337 SPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQ 396
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 397 LARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 440
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 140 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 197
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ VP AH G
Sbjct: 198 ACRMILEIMQKEADETKLAEE-----------------------------VPLKILAHNG 228
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 229 --------------------------FVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 262
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 263 YNPERTITVRGTIEACANAEIEIMKKLREAFENDML 298
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 374 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 431
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 432 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 488
Query: 157 ISR 159
+ R
Sbjct: 489 VPR 491
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 376 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 433
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 434 GRIFGKLKEENFFN 447
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 24/176 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K ++ +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKF-------EEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 133
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ L +S +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 134 CSIQVASEMLPNST----ERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 183
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
V+++ IG ++G+GG I EI QISGA I++S+ + G ++R +TISG S+ A+ +
Sbjct: 292 VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYL 351
Query: 323 IMQKVAYASDRLMD 336
I V L++
Sbjct: 352 INMSVELQKANLLE 365
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 289 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 348
Query: 98 VDLV 101
L+
Sbjct: 349 QYLI 352
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 289 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 348
Query: 185 LELILL--KLSEDTLYSQTMT 203
LI + +L + L Q +
Sbjct: 349 QYLINMSVELQKANLLEQAQS 369
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 132/308 (42%), Gaps = 54/308 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V++ AG +IGK G + D + ++G R +S+ PG DR++ ++G + I
Sbjct: 43 LRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSK---VVPGVHDRVLTVTGALTGISD 99
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT--KLRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A LV D L+ + VG +RL++ ++ G+IIG+ G IK D S +
Sbjct: 100 AYGLVADSLVKGVPQMGMGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 159
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
V + L S +R+V + GT + +A+ I L +D Y V
Sbjct: 160 MVAQKEMLPQS----TERIVEVQGTPEGVQKAVWEIGKCLIDDEQRG--------YGTVL 207
Query: 213 FSGFHGMPYGAVPPPVPAVPHNTAAHYG-----------------------------PNM 243
+S + GA PP+ + T A YG P+
Sbjct: 208 YSPAVRVQGGAPAPPL----NGTGASYGAPRSYNRTGNGADFTGGQSPSSYPPRRNGPSD 263
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
GG + + + I + + +G ++GRGG I EI + SGARI ++ T
Sbjct: 264 GGPPPRPEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKA--PHDETG 321
Query: 304 ERKVTISG 311
ER TI+G
Sbjct: 322 ERMFTITG 329
>gi|268562247|ref|XP_002638547.1| Hypothetical protein CBG05583 [Caenorhabditis briggsae]
Length = 399
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 97/174 (55%), Gaps = 14/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ + GA+IGKGG + + ++ + R+Q+S++ E +PGT++RI ++ G ++ I+
Sbjct: 43 IKILIPSSAVGAIIGKGGEAMRNLKTDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMS 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK-----TKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++ + DK+ + + +D K ++++++PN+S G +IGK+GA IK +
Sbjct: 103 VIESIQDKIREKCADQAGSDAFDHKNTSRGNEIKIVMPNTSAGMVIGKSGANIKDIREQF 162
Query: 152 QAVIKISRLDHSYYGLN--DRLVTL----TGTLDEQMRALELILLKLSEDTLYS 199
I++ S +R+VT+ +G L ++A +L K++ D +S
Sbjct: 163 GCQIQVYPKAGSVEAKTSLERVVTVAHDESGAL---LQAASRVLEKVASDPHHS 213
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
Q ++ G +++++P+S+ G+IIGK G +++ D+ +++S+ +Y G ++R+
Sbjct: 33 QEEEGGDHLSIKILIPSSAVGAIIGKGGEAMRNLKTDNNCRVQMSKNSETYPGTSERICL 92
Query: 174 LTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPH 233
+ G L+ M +E I K+ E
Sbjct: 93 VKGRLNNIMSVIESIQDKIREKC------------------------------------- 115
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
G F + R N + I + + G V+G+ G NI +I + G +I+V
Sbjct: 116 ------ADQAGSDAFDHKNTSRGNEIKIVMPNTSAGMVIGKSGANIKDIREQFGCQIQVY 169
Query: 294 DR-GDFFSGTS-ERKVTISGPQR-SIRTAESMIMQKVA 328
+ G + TS ER VT++ + ++ A S +++KVA
Sbjct: 170 PKAGSVEAKTSLERVVTVAHDESGALLQAASRVLEKVA 207
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 152/346 (43%), Gaps = 34/346 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 157 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 216
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 217 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 272
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 273 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 329
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 330 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 389
Query: 231 VP--HNTAAH-------YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
P H A H Y + G ++ ++++ + + +G ++G+ G +I +
Sbjct: 390 SPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQ 449
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 450 LARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 493
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 193 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 250
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ VP AH G
Sbjct: 251 ACRMILEIMQKEADETKLAEE-----------------------------VPLKILAHNG 281
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 282 --------------------------FVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 315
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 316 YNPERTITVRGTIEACANAEIEIMKKLREAFENDML 351
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 427 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 484
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 485 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 541
Query: 157 ISR 159
+ R
Sbjct: 542 VPR 544
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 429 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 486
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 487 GRIFGKLKEENFFN 500
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 152/346 (43%), Gaps = 34/346 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 153 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 212
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 213 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 268
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 269 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 325
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 326 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 385
Query: 231 VP--HNTAAH-------YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
P H A H Y + G ++ ++++ + + +G ++G+ G +I +
Sbjct: 386 SPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQ 445
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 446 LARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 489
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 246
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ VP AH G
Sbjct: 247 ACRMILEIMQKEADETKLAEE-----------------------------VPLKILAHNG 277
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 278 --------------------------FVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 311
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 312 YNPERTITVRGTIEACANAEIEIMKKLREAFENDML 347
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 423 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 480
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 481 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 537
Query: 157 ISR 159
+ R
Sbjct: 538 VPR 540
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 425 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 482
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 483 GRIFGKLKEENFFN 496
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 14/185 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ D + R
Sbjct: 25 LRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGS-----CPERITTITGSTDAVFR 79
Query: 97 AVDLVIDKLLTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
AV ++ KL +L A G LRL++P S CGS+IGKAGA I+ + + A +
Sbjct: 80 AVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQV 139
Query: 156 KIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
+++ L +S +R VT++G D ++ + I L S + SQ VP G
Sbjct: 140 QVAGDLLPNS----TERAVTVSGVPDTIIQCVRQICLDPSSQS-SSQEFLVPNDLIGCII 194
Query: 214 SGFHG 218
G HG
Sbjct: 195 -GRHG 198
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+ D R
Sbjct: 25 LRMLMHGKEIGSIIGKKGETVKRIREQSTARITISE-----GSCPERITTITGSTDAVFR 79
Query: 184 ALELILLKLSEDTLYS----QTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
A+ +I KL ED P T V + G G + + +T A
Sbjct: 80 AVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQV 139
Query: 240 G------PN-------MGG---------RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGR 277
PN + G R+ + +++S V ++ IG ++GR G
Sbjct: 140 QVAGDLLPNSTERAVTVSGVPDTIIQCVRQICLDPSSQSSSQEFLVPNDLIGCIIGRHGS 199
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA IK+ G+ G+SER VTI+G SI A+ +I
Sbjct: 200 KISEIRQMSGAHIKI---GNQTEGSSERHVTITGTPVSITLAQYLI 242
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 17/144 (11%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 105 PVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQV--AGDLLPNSTERAVTVSGVPDT 162
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
I++ V + D + +VPN G IIG+ G+ I S A
Sbjct: 163 IIQCVRQIC------------LDPSSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGA 210
Query: 154 VIKISRLDHSYYGLNDRLVTLTGT 177
IKI + G ++R VT+TGT
Sbjct: 211 HIKIG---NQTEGSSERHVTITGT 231
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V+ + DP+ + + FLV N L G +IG+ GS I++ + SGA I++ E G+++
Sbjct: 167 VRQICLDPSSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTE---GSSE 223
Query: 83 RIIMISGT 90
R + I+GT
Sbjct: 224 RHVTITGT 231
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG 215
A V F+G
Sbjct: 185 APVIFAG 191
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 53/188 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G T+K ++S A I IS + +R+VT+TG D +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K ED + S + N+ A P +
Sbjct: 71 AFAMIAYKFEEDIINSMS--------------------------------NSTATSKPPV 98
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 99 --------------TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA--GDMLPNST 142
Query: 304 ERKVTISG 311
ER VTISG
Sbjct: 143 ERAVTISG 150
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|328850348|gb|EGF99514.1| hypothetical protein MELLADRAFT_73383 [Melampsora larici-populina
98AG31]
Length = 383
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 164/382 (42%), Gaps = 59/382 (15%)
Query: 1 METNESSYVPSPDVHGKRSTA-PVKS--LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTI 57
M T S + SP RS P+ S +DPT T +R LVS AG +IGKGG T+
Sbjct: 1 MATVASPTLSSPPDKSIRSNGLPINSTGAGADPTSNVT-LRSLVSTKEAGVIIGKGGKTV 59
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQA- 115
+ + Q+G + +S++ G DR++ +SG ++ + +A +V D +L L A D +
Sbjct: 60 AEIREQTGTKAGVSKA---VQGVHDRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSL 116
Query: 116 ---DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDR 170
T T +R++V ++ GSIIG+ G+ IK D S + S+ L S +R
Sbjct: 117 TVPPPTATTTAIRVLVSHNLMGSIIGRQGSKIKEIQDISGVRMVASKEMLPQS----TER 172
Query: 171 LVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTYAGVFFSGF------- 216
+V + G+ + A+ I L ED LY P + G
Sbjct: 173 VVEVQGSPEAIRVAIHEIGKCLMEDWERAHGTVLYQPGALGPDGVTAAYPGGVLAGGFGV 232
Query: 217 --------------HGMPYGA-VPPPVPA-VPHNTAAHYGPNMGGRKFQNNK-------- 252
G+P G + +P PHN H N G + + N
Sbjct: 233 GGQGYGNGGARRAGSGVPSGGHMAGDLPGRRPHNGTYHSNGNENGHRSRENSLASAPAPV 292
Query: 253 -DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
D + I + + +G ++G+GG I EI ++SG+RI ++ T ER TI+G
Sbjct: 293 ADRLLRTQNISIPADMVGCIIGKGGAKINEIRRMSGSRISIAK--TPHDDTGERMFTITG 350
Query: 312 PQRSIRTAESMIMQKVAYASDR 333
+ A ++ ++ +R
Sbjct: 351 SSEANEKALFLLYNQLESEKER 372
>gi|47222225|emb|CAG11104.1| unnamed protein product [Tetraodon nigroviridis]
Length = 580
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 155/366 (42%), Gaps = 65/366 (17%)
Query: 7 SYVP-------SPDVHGKRS---TAPVKSLSSDPTEKPTY-----IRFLVSNPLAGAVIG 51
SY+P +P G+RS P +S S +P +R LV GA+IG
Sbjct: 124 SYIPDETASPEAPSAGGRRSFNTRGPPRSGSPSLGARPKVQSDIPLRMLVPTQFVGAIIG 183
Query: 52 KGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHA 111
K G TI + Q+ ++I + R G ++ I I T + A ++D + E
Sbjct: 184 KQGDTIRNLTKQTHSKIDIHRKEN--AGAAEKPITIHSTPEGSSNACRTIMDIMQKEAID 241
Query: 112 EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDR 170
+++ L+++V N+ G +IGK G +K D+ I IS L D + Y +R
Sbjct: 242 TKFTEEI----PLKILVHNNFVGRLIGKEGRNLKKIEQDTGTKITISSLQDLTLYN-PER 296
Query: 171 LVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YTYAGVFFSGFHGM-- 219
+T+ G+++ RA E ++ K+ E + Q+ +P G+F SG GM
Sbjct: 297 TITVKGSIEACGRAEEEVMKKIREAYESDVAAMNLQSNLIPGLNLNALGLFPSGSPGMGP 356
Query: 220 PYGAVPPPVPAVPHNTAAHYGPNMG------------------GRKFQNNKDDRTNSLTI 261
+VPPP AH G + G G+ + + T L I
Sbjct: 357 SMSSVPPP--------GAHGGCSFGCSPYGVEGPLWASMMSASGQTLAGSPESETVHLFI 408
Query: 262 GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAES 321
+G ++G+ G++I ++S +GA IK S +G R V I GP + A+
Sbjct: 409 PTLA--VGAIIGKQGQHIKQLSHFAGASIKASRKG---MDPKHRMVIIVGPPEAQFKAQC 463
Query: 322 MIMQKV 327
I K+
Sbjct: 464 RIFGKL 469
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TI++ + + I I R +++ G ++ +T+ T +
Sbjct: 169 LRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENA--GAAEKPITIHSTPEGSSN 226
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A I+ D + + + +T +P
Sbjct: 227 ACRTIM-----DIMQKEAIDTKFTEE---------------------IP----------- 249
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
L I V + +G ++G+ GRN+ +I Q +G +I +S D
Sbjct: 250 ---------------LKILVHNNFVGRLIGKEGRNLKKIEQDTGTKITISSLQDLTLYNP 294
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE +M+K+ AY SD
Sbjct: 295 ERTITVKGSIEACGRAEEEVMKKIREAYESD 325
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 7 SYVPSPDVHGKRS-----------------TAPVKSLSSDPTEKPTYIRFLVSNPLAGAV 49
S VP P HG S +A ++L+ P + ++ + GA+
Sbjct: 359 SSVPPPGAHGGCSFGCSPYGVEGPLWASMMSASGQTLAGSPESETVHL--FIPTLAVGAI 416
Query: 50 IGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
IGK G I +GA I+ SR R+++I G + +A + KL E
Sbjct: 417 IGKQGQHIKQLSHFAGASIKASRKGM---DPKHRMVIIVGPPEAQFKAQCRIFGKLKEE- 472
Query: 110 HAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+ G K +++L VP+ + G +IGK G T+ + + A + + R
Sbjct: 473 ------NFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPR 520
>gi|338723967|ref|XP_001497902.3| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Equus caballus]
Length = 638
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 134/319 (42%), Gaps = 33/319 (10%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P + P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 239 RQGSPGSASKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 295
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 296 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 350
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-- 195
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 351 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITIKGNVETCAKAEEEIMKKIRESYE 410
Query: 196 ----TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
++ Q +P G+F P +PPP P Y +F
Sbjct: 411 NDIASMNLQAHLIPGLNLNALGLF------PPTSGMPPPTSGPPSAMTPPYP------QF 458
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + T L I +G ++G+ G++I ++S+ +GA IK++ R V
Sbjct: 459 EQQSETETVHLFIPALS--VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVI 514
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+GP + A+ I K+
Sbjct: 515 ITGPPEAQFKAQGRIYGKI 533
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 477 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 534
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 535 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 590
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 591 NDQVVVKITG 600
>gi|425778068|gb|EKV16213.1| hypothetical protein PDIP_37280 [Penicillium digitatum Pd1]
gi|425780605|gb|EKV18611.1| hypothetical protein PDIG_09250 [Penicillium digitatum PHI26]
Length = 496
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 153/367 (41%), Gaps = 83/367 (22%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG D
Sbjct: 111 HIRAVISSPEAATVIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAAA 167
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK G+ I+ + S A
Sbjct: 168 KAFGLIIRTLNNEPLEAASTAQ---SKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGA 224
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED----------TLYS---- 199
+ S D +R + + G D A + + L E + Y+
Sbjct: 225 RLNAS--DACLPLSTERSLVILGVADAVHIATYYVAVTLVEQLSERYGGPAASAYATRSG 282
Query: 200 --------QTMTVPYT--YAGVFF-----------------SGFHGMPY---GAVPPPVP 229
VPY AG + G +G+PY P PVP
Sbjct: 283 GPAGAVPGGMQVVPYVPQPAGGQYGHPETFKRHHPHPNRAGGGAYGVPYLHGQPAPAPVP 342
Query: 230 AVP-HNTAAHYGPNMGGRKFQ------------NNKDDRTNSLTIG-------------V 263
P H AA P G Q + T +G +
Sbjct: 343 QTPMHFPAAPQAPYGGAGPHQPAPFVGGPQQPTPGRGPPTAPAPVGASMPGQPLTQQIYI 402
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ +G ++G+GG I EI +SG+ IK+++ + ++ER VTI+G + A M+
Sbjct: 403 PNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE---SSNERLVTITGTAECNQMALYML 459
Query: 324 MQKVAYA 330
++ ++
Sbjct: 460 YSRLGWS 466
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E TY +R L+ + L G++IGKGGS I + Q SGAR L+ S
Sbjct: 174 IRTLNNEPLEAASTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGAR--LNASDA 231
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 232 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 265
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 8 YVPSPDVHGKRSTAPVKSLSSDPTE-------KPTYIRFLVSNPLAGAVIGKGGSTINDF 60
+ P+P V G + P + + P +P + + N + GA+IGKGG+ IN+
Sbjct: 362 HQPAPFVGGPQQPTPGRGPPTAPAPVGASMPGQPLTQQIYIPNDMVGAIIGKGGAKINEI 421
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SG+ I+++ E + +R++ I+GT + A+ ++ +L
Sbjct: 422 RHLSGSVIKINEPQE---SSNERLVTITGTAECNQMALYMLYSRL 463
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 149/331 (45%), Gaps = 67/331 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR---IIMISGT--I 91
IR L G VIG+GGS+I + SGA +++ + DR +I ++ T +
Sbjct: 309 IRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTK------ADRDECLITVTSTESV 362
Query: 92 DEILR-AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
D++ AV+ V LL + D+ DD +RL+VP+ G IIGK+G+ I
Sbjct: 363 DDLKSMAVEAV---LLLQAKINDEDDDT---VAIRLLVPSKIIGCIIGKSGSIINEIRKR 416
Query: 151 SQAVIKISRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
++A ++IS+ + ND L+ + G + AL I+L+L +D L + T T A
Sbjct: 417 TRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRD-TGHNTSA 475
Query: 210 GV--FFSGFHGMPYGAV---PPPVPAVPHNTAAH--------------------YGPNMG 244
G +SG G+ +V PPV + ++ A G N
Sbjct: 476 GTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLYGYGSLSVGENAY 535
Query: 245 GRKFQNNKD-----DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD----R 295
G + ++ + + +G V+G+GG NI I +ISGA I++SD R
Sbjct: 536 GSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSR 595
Query: 296 GD---FFSGTSERKVTISGPQRSIRTAESMI 323
GD SGT E+K RTAE++I
Sbjct: 596 GDRVALISGTPEQK----------RTAENLI 616
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 60/311 (19%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI---------- 87
R L + + G+VIGK G IN + + A+I++ + FPG DR+I I
Sbjct: 40 RILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVV---DPFPGAKDRVITIYCYVKEKEEV 96
Query: 88 ------------SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
D +L+ +++ + + E+ K + +++VP+S +
Sbjct: 97 EVDDEFNDKQPLCPAQDALLKVHAAIVNAVAS---LENSDKKKKDKEECQILVPSSQSAN 153
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRALEL 187
+IGKAGATIK ++A IKI+ D HS D V + G + + + A+
Sbjct: 154 VIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISA 213
Query: 188 ILLKLS--EDTLYSQTM-----------TVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHN 234
I+ K + E+ T+ VP AG F+ + PPV A H
Sbjct: 214 IMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHV 273
Query: 235 TAAHYGPNMGGRK--FQNN-------KDDRTNSLTIGVAD--EHIGFVVGRGGRNIMEIS 283
+MG + +N R+ L I V + IG V+GRGG +I +
Sbjct: 274 PELQGYSDMGSTWPVYSSNLPVVSGYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVR 333
Query: 284 QISGARIKVSD 294
+ SGA ++V D
Sbjct: 334 EASGAHVEVDD 344
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE-FFPGTTDRIIM 86
+D + IR LV + + G +IGK GS IN+ + ++ A +++S+S D +I
Sbjct: 381 NDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSERPKCADANDELIE 440
Query: 87 ISGTIDEILRAVDLVIDKL 105
+ G + + A+ ++ +L
Sbjct: 441 VVGEVGSVRDALVQIVLRL 459
>gi|410911650|ref|XP_003969303.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Takifugu rubripes]
Length = 581
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 135/303 (44%), Gaps = 36/303 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ ++I + R G ++ I I T +
Sbjct: 197 LRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENA--GAAEKPITIHSTPEGSSN 254
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E +++ L+++V N+ G +IGK G +K D+ I
Sbjct: 255 ACRTIMEIMQKEAIDTKFTEEI----PLKILVHNNFVGRLIGKEGRNLKKIEQDTGTKIT 310
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---Y 206
IS L D + Y +R +T+ G ++ RA E ++ K+ E + Q+ +P
Sbjct: 311 ISSLQDLTVYN-PERTITVKGAIENCGRAEEEVMKKIREAYESDVAAMNLQSNLIPGLNL 369
Query: 207 TYAGVFFSGFHGM--PYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
G+F SG GM ++PPP AH GG F N + T L I
Sbjct: 370 NALGLFPSGTPGMGPSMSSLPPP--------GAH-----GGYSFGGNPESETVHLFIPTL 416
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+G ++G+ G++I ++S +GA IK++ R V I GP + A+ I
Sbjct: 417 A--VGAIIGKQGQHIKQLSHFAGASIKIAPAEGM--DPKHRMVIIVGPPEAQFKAQCRIF 472
Query: 325 QKV 327
K+
Sbjct: 473 GKL 475
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
L I V + +G ++G+ GRN+ +I Q +G +I +S D ER +T+ G +
Sbjct: 278 LKILVHNNFVGRLIGKEGRNLKKIEQDTGTKITISSLQDLTVYNPERTITVKGAIENCGR 337
Query: 319 AESMIMQKV--AYASD 332
AE +M+K+ AY SD
Sbjct: 338 AEEEVMKKIREAYESD 353
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 7 SYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGA 66
S +P P HG S +P + + + GA+IGK G I +GA
Sbjct: 387 SSLPPPGAHGGYS------FGGNPESE--TVHLFIPTLAVGAIIGKQGQHIKQLSHFAGA 438
Query: 67 RIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRL 126
I+++ + P R+++I G + +A + KL E + G K +++L
Sbjct: 439 SIKIAPAEGMDP--KHRMVIIVGPPEAQFKAQCRIFGKLKEE-------NFFGPKEEVKL 489
Query: 127 ----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
VP+ + G +IGK G T+ + + A + + R
Sbjct: 490 EAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPR 526
>gi|126138010|ref|XP_001385528.1| hypothetical protein PICST_62156 [Scheffersomyces stipitis CBS
6054]
gi|126092806|gb|ABN67499.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 343
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 133/310 (42%), Gaps = 58/310 (18%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS +G +IG+ G I+ ++++ + +SR PG+ +RI+ +SGT+D+ +A
Sbjct: 70 RVLVSAKESGCLIGQNGQVIDSIRAETNTKAGISR---LQPGSHERILTVSGTLDDCAKA 126
Query: 98 VDLVIDKL------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ L L +L + + T LRL++PNS G++IG G I+
Sbjct: 127 LSYFAQALCNSTIETYNFFPLKQLSSNPCIEH--QTTILRLLIPNSQMGTLIGSKGLRIQ 184
Query: 146 SFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
Q IS + + G N+RLV L G++++ AL +I L ED +S +
Sbjct: 185 QI----QNKYNISMIASKSFLPGSNERLVELQGSVNDLYDALRIISRCLIED--FSSIVG 238
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
Y G Y P A P TA+ PN
Sbjct: 239 TNYYIP-------RGHHYNNSSSPRGANPITTASISFPN--------------------- 270
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ +G ++G+ G I + +ISGA I +S+ G ER T+SG ++ A+ ++
Sbjct: 271 --DIVGALIGKNGSRIQGVRKISGATIGISEE---VEGKPERIFTLSGSAHAVEKAKELL 325
Query: 324 MQKVAYASDR 333
+ R
Sbjct: 326 YHNLEREEQR 335
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 43 NPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVI 102
N + GA+IGK GS I + SGA I +S E G +RI +SG+ + +A +L+
Sbjct: 270 NDIVGALIGKNGSRIQGVRKISGATIGISEEVE---GKPERIFTLSGSAHAVEKAKELLY 326
Query: 103 DKLLTELHAEDQADD 117
L E +A++
Sbjct: 327 HNLEREEQRRSEAEE 341
>gi|341893250|gb|EGT49185.1| hypothetical protein CAEBREN_32371 [Caenorhabditis brenneri]
Length = 430
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ + GA+IGKGG + + ++ + R+Q+S++ E +PGT++RI ++ G ++ I+
Sbjct: 45 IKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMA 104
Query: 97 AVDLVIDKL---LTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++ + DK+ + D D T +++++++PN+S G +IGK+GA IK +
Sbjct: 105 VIESIQDKIREKCADQAGNDAFDHKNTSRGSEIKIVMPNTSAGMVIGKSGANIKDIREHF 164
Query: 152 QAVIKI 157
I++
Sbjct: 165 SCQIQV 170
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 96/218 (44%), Gaps = 46/218 (21%)
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
Q ++ G +++++P+++ G+IIGK G +++ +D+ +++S+ +Y G ++R+
Sbjct: 35 QEEEGGDHLSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICL 94
Query: 174 LTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPH 233
+ G L+ M +E I K+ E
Sbjct: 95 VKGRLNNIMAVIESIQDKIREKC------------------------------------- 117
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
G F + R + + I + + G V+G+ G NI +I + +I+V
Sbjct: 118 ------ADQAGNDAFDHKNTSRGSEIKIVMPNTSAGMVIGKSGANIKDIREHFSCQIQVY 171
Query: 294 DR-GDFFSGTS-ERKVTISGPQ-RSIRTAESMIMQKVA 328
+ G + TS ER VT++ + +++ A S +++KVA
Sbjct: 172 PKAGSVEAKTSLERVVTVAHEESQALLQAASRVLEKVA 209
>gi|259487459|tpe|CBF86155.1| TPA: KH domain RNA binding protein (AFU_orthologue; AFUA_2G04940)
[Aspergillus nidulans FGSC A4]
Length = 465
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 154/367 (41%), Gaps = 78/367 (21%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 109 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAVA 165
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E D A +KT LRL++P+ GSIIGK G I+ D S A
Sbjct: 166 KAFGLIIRTLNNE--PLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGAR 223
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED----------TLYS----- 199
+ S D +R + + G D A + + L E + Y+
Sbjct: 224 LNAS--DACLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGG 281
Query: 200 -------QTMTVPYT--YAGVFF-----------------SGFHGMPY---GAVPPPV-- 228
VPY AG + +G +G+PY P PV
Sbjct: 282 PAGAVPGGMQVVPYVPQPAGGQYGHPDTFKRHHPGQARAGAGAYGVPYLHGQHAPAPVAP 341
Query: 229 -------PAVPHNTAAHYGPN-MGGRKFQNNKDDRTNSLTIG-------------VADEH 267
P P+ A + P G + + T + +G + ++
Sbjct: 342 QPMHYGAPQTPYAGAGPHQPTPYGAPQAAQPRGGPTPAAPVGGAMPGQPLTQQIYIPNDM 401
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+GG I EI +SG+ IK+++ + ++ER VTI+G Q + A M+ ++
Sbjct: 402 VGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQECNQMALYMLYSRL 458
Query: 328 AYASDRL 334
R+
Sbjct: 459 ESEKHRI 465
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 232 PHNTAAHYGPNMGGRKFQNNKDDRTNSLTIG--VADEHIGFVVGRGGRNIMEISQISGAR 289
P + A +G G + Q D +N + I ++ + V+G+GG N+ +I ++SGA+
Sbjct: 81 PIQSTASHGEAAGNQSEQQRPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAK 140
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
VS D+ G ER +T+SGPQ ++ A +I++ +
Sbjct: 141 CTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTL 175
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ E + +R++ I+GT +
Sbjct: 389 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQE 445
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 446 CNQMALYMLYSRLESEKH 463
>gi|392922650|ref|NP_001256769.1| Protein Y59A8B.10, isoform a [Caenorhabditis elegans]
gi|11065662|emb|CAC14410.1| Protein Y59A8B.10, isoform a [Caenorhabditis elegans]
Length = 413
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ + GA+IGKGG + + ++ + R+Q+S++ E +PGT++RI ++ G ++ I+
Sbjct: 44 IKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMA 103
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++ + DK+ + + +D K ++++++PN+S G +IGK+GA IK +
Sbjct: 104 VIESIQDKIREKCADQGGSDAFDHKNTSRGAEIKIVMPNTSAGMVIGKSGANIKDIREQF 163
Query: 152 QAVIKI 157
I++
Sbjct: 164 GCQIQV 169
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 46/216 (21%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
++ G +++++P+++ G+IIGK G +++ +D+ +++S+ +Y G ++R+ +
Sbjct: 36 EEGGDHLSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVK 95
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
G L+ M +E I K+ E
Sbjct: 96 GRLNNIMAVIESIQDKIRE----------------------------------------K 115
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
A G G F + R + I + + G V+G+ G NI +I + G +I+V +
Sbjct: 116 CADQG---GSDAFDHKNTSRGAEIKIVMPNTSAGMVIGKSGANIKDIREQFGCQIQVYPK 172
Query: 296 -GDFFSGTS-ERKVTISGPQRS-IRTAESMIMQKVA 328
G + TS ER VT++ + S + A S +++KVA
Sbjct: 173 AGSVEAKTSLERVVTVAHDEASALLQAASRVLEKVA 208
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT--DRIIMIS 88
T + I+ ++ N AG VIGK G+ I D + Q G +IQ+ T +R++ ++
Sbjct: 130 TSRGAEIKIVMPNTSAGMVIGKSGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVA 189
Query: 89 -GTIDEILRAVDLVIDKLLTELH--AEDQADDVG 119
+L+A V++K+ ++ H +E +D G
Sbjct: 190 HDEASALLQAASRVLEKVASDPHHASEINKEDFG 223
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 149/331 (45%), Gaps = 67/331 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR---IIMISGT--I 91
IR L G VIG+GGS+I + SGA +++ + DR +I ++ T +
Sbjct: 121 IRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTK------ADRDECLITVTSTESV 174
Query: 92 DEILR-AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
D++ AV+ V LL + D+ DD +RL+VP+ G IIGK+G+ I
Sbjct: 175 DDLKSMAVEAV---LLLQAKINDEDDDT---VAIRLLVPSKIIGCIIGKSGSIINEIRKR 228
Query: 151 SQAVIKISRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
++A ++IS+ + ND L+ + G + AL I+L+L +D L + T T A
Sbjct: 229 TRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRD-TGHNTSA 287
Query: 210 GV--FFSGFHGMPYGAV---PPPVPAVPHNTAAH--------------------YGPNMG 244
G +SG G+ +V PPV + ++ A G N
Sbjct: 288 GTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLYGYGSLSVGENAY 347
Query: 245 GRKFQNNKD-----DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD----R 295
G + ++ + + +G V+G+GG NI I +ISGA I++SD R
Sbjct: 348 GSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSR 407
Query: 296 GD---FFSGTSERKVTISGPQRSIRTAESMI 323
GD SGT E+K RTAE++I
Sbjct: 408 GDRVALISGTPEQK----------RTAENLI 428
>gi|385305943|gb|EIF49885.1| kh domain rna binding protein [Dekkera bruxellensis AWRI1499]
Length = 541
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 145/356 (40%), Gaps = 94/356 (26%)
Query: 34 PTYIRF--LVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
PTY+ F L + A V+GKGG TI + S ARI +S + G +R+I + G
Sbjct: 153 PTYVHFRMLCTISEAATVVGKGGETIKKIKELSNARINVS---DNLKGVPERVISVRGPA 209
Query: 92 DEILRAVDLVIDKLLTE-LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ + +A L++ L E L+ + + LRL+ P++ G IIGK G+ + +
Sbjct: 210 EYVAKAFGLIVRMQLGEPLNVPSSLES--QQYNLRLLFPHTIMGYIIGKKGSRFREIEES 267
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL-YSQTM------- 202
S A +K + D DR++ + G D A+ + +++ + + Q M
Sbjct: 268 SAAALKAN--DQILPASTDRVLNINGVAD----AIHIATYYIAQTVIEHKQQMSKAIYYN 321
Query: 203 -------TVP----------YTYAGVFFSGFHGMPYGAVP--PPVPAVPHNTAAHYG--- 240
T+P + G F G G +G P P+ +P YG
Sbjct: 322 PANFAQPTIPLVNSSARRFQHRMMGDFRGGRMGRQFGPQPGFGPMMGMPSQMMGMYGQMS 381
Query: 241 ---------------------------PNMGGR-------KFQN---NKDDRTNSLTIG- 262
P MGG +F + R ++T G
Sbjct: 382 PQGNANGQSPESGDGQSNMGRIPGGKPPQMGGYFPPQYAPQFNPAAVASNTRAETVTTGA 441
Query: 263 ---------VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
V +HIG ++GRGGRN+ +I Q +G +K++D G++ERK+T+
Sbjct: 442 DGKLNQDIFVPQKHIGLIIGRGGRNLKDIRQQTGCYVKINDE---VPGSTERKLTL 494
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
VVG+GG I +I ++S ARI VSD G ER +++ GP + A +I++
Sbjct: 170 VVGKGGETIKKIKELSNARINVSDN---LKGVPERVISVRGPAEYVAKAFGLIVR 221
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 150/357 (42%), Gaps = 49/357 (13%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R SS P + +R LV GA+IGK
Sbjct: 74 SYIPDEEVSSSPPPQRSRRGGHSSRERGSSPGGSSQPKQLEFPLRMLVPTQFVGAIIGKE 133
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +++ + R G ++ I I T + A +++D + E
Sbjct: 134 GLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSEACRMILDIMQKEADETK 191
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLV 172
A+++ L+++ NS G +IGK G +K D+ I IS L D + Y +R +
Sbjct: 192 SAEEI----PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYN-PERTI 246
Query: 173 TLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMP--- 220
T+ G+ + +A I+ KL E + Q +P G+F +G +P
Sbjct: 247 TVKGSTEACSKAQVEIMKKLREAYENDVVAVNQQANLIPGLNLNALGIFSTGLSMLPSTP 306
Query: 221 --YGAVPPPVPAVPHNTAAH--------YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGF 270
GA A P++ A YG G + + + + + +G
Sbjct: 307 GARGA----AAATPYHPFASSSAYLSGLYGAPPGSAFPHQHPLPEQEVVNLFIPTQAVGA 362
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
++G+ G++I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 363 IIGKKGQHIKQLARFAGASIKIAPAEG--PDASERMVIITGPPEAQFKAQGRIFGKL 417
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TIK+ +Q+ + I R +++ G ++ +T+ T +
Sbjct: 117 LRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSE 174
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL + ++ +++ +P AH
Sbjct: 175 ACRMILDIMQKEADETKSAE--------------------------EIPLKILAH----- 203
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NSL +G ++G+ GRN+ +I Q +G +I +S D
Sbjct: 204 -------------NSL--------VGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNP 242
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + A+ IM+K+ AY +D
Sbjct: 243 ERTITVKGSTEACSKAQVEIMKKLREAYEND 273
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + + + GA+IGK G I +GA I+++ + P ++R+++I+G
Sbjct: 344 PLPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAE--GPDASERMVIITG 401
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ +A + KL E + + K + + VP+ + G +IGK G T+ +
Sbjct: 402 PPEAQFKAQGRIFGKLKEENFFNPKEE---VKLEAHIKVPSFAAGRVIGKGGKTVNELQN 458
Query: 150 DSQAVIKISR 159
+ A + + R
Sbjct: 459 LTSAEVIVPR 468
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK G IK + A IKI+ + ++R+V +TG + Q +
Sbjct: 351 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGP--DASERMVIITGPPEAQFK 408
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 409 AQGRIFGKLKEENFFN 424
>gi|312382238|gb|EFR27763.1| hypothetical protein AND_05166 [Anopheles darlingi]
Length = 738
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 139/325 (42%), Gaps = 45/325 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 270 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNV--GSVEKAITIYGNPENCTM 327
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E ++ ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 328 ACKKILEVMQQEANSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 382
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D S + L +R++T+ GT++ + I KL + P + + F G
Sbjct: 383 VSSINDISSFNL-ERIITVKGTIENMSKGESQISAKLRQSYENDLQALAPQS---IMFPG 438
Query: 216 FHGMPYGAVP------------------PPVPAV---------PHNTAAHYGPNMGGRKF 248
H M + P P P + Y P GG
Sbjct: 439 LHPMAMMSTAGNGMGFTGRTGGGGGGGVPTAPGAGAGGAGGMYPGSNFPMYQPPTGGPAT 498
Query: 249 ----QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS--DRGDFFSGT 302
+ + + + + +G ++G G +I I + SGA +K++ +
Sbjct: 499 GGVPPGGSSEVQETTYLYIPNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQ 558
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
+ERKVTI G + A+ +I +K+
Sbjct: 559 TERKVTIIGTPEAQWKAQYLIFEKM 583
>gi|308486259|ref|XP_003105327.1| hypothetical protein CRE_21277 [Caenorhabditis remanei]
gi|308256835|gb|EFP00788.1| hypothetical protein CRE_21277 [Caenorhabditis remanei]
Length = 441
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ + GA+IGKGG + + ++ + R+Q+S++ E +PGT++RI ++ G ++ I+
Sbjct: 45 IKILIPSSAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMA 104
Query: 97 AVDLVIDKL---LTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++ + DK+ + D D T ++++++PN+S G +IGK+GA IK +
Sbjct: 105 VIESIQDKIREKCADQAGNDAFDHKNTSRGNEIKIVMPNTSAGMVIGKSGANIKDIREQF 164
Query: 152 QAVIKI 157
I++
Sbjct: 165 GCQIQV 170
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 46/218 (21%)
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
Q ++ G +++++P+S+ G+IIGK G +++ +D+ +++S+ +Y G ++R+
Sbjct: 35 QEEEGGDHLSIKILIPSSAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICL 94
Query: 174 LTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPH 233
+ G L+ M +E I K+ E
Sbjct: 95 VKGRLNNIMAVIESIQDKIREKC------------------------------------- 117
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
G F + R N + I + + G V+G+ G NI +I + G +I+V
Sbjct: 118 ------ADQAGNDAFDHKNTSRGNEIKIVMPNTSAGMVIGKSGANIKDIREQFGCQIQVY 171
Query: 294 DR-GDFFSGTS-ERKVTISGPQR-SIRTAESMIMQKVA 328
+ G + TS ER VT++ + ++ A S +++KVA
Sbjct: 172 PKAGSVEAKTSLERVVTVAHEESAALLQAASRVLEKVA 209
>gi|255932595|ref|XP_002557854.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582473|emb|CAP80658.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 473
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 165/394 (41%), Gaps = 95/394 (24%)
Query: 2 ETNESSYVP-SPDVHGKRSTAPVKSLSSD---------PTEKPTY--IRFLVSNPLAGAV 49
+T + VP +P+ G T P++S +S P ++ ++ IR ++S+P A V
Sbjct: 62 DTQGDTVVPDAPNGKGLPDTQPIQSTASQADRAASDQPPQDESSWVHIRAVISSPEAATV 121
Query: 50 IGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE- 108
IGKGG ++ + SGA+ +S ++ G +RI+ +SG D +A L+I L E
Sbjct: 122 IGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAAAKAFGLIIRTLNNEP 178
Query: 109 LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL 167
L A A +KT LRL++P+ GSIIGK G+ I+ + S A + S D
Sbjct: 179 LEAASTAQ---SKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNAS--DACLPLS 233
Query: 168 NDRLVTLTGTLDEQMRALELILLKLSED----------TLYS------------QTMTVP 205
+R + + G D A + + L E + Y+ VP
Sbjct: 234 TERSLVILGVADAVHIATYYVAVTLVEQLSERYGGPAASAYATRSGGPAGAVPGGMQVVP 293
Query: 206 YT--YAGVFF-----------------SGFHGMPY---GAVPPPVPAVP-HNTAAHYGPN 242
Y AG + G +G+PY P PVP P H AA P
Sbjct: 294 YVPQPAGGQYGHPDTFKRHHPHPNRAGGGAYGVPYLHGQPAPAPVPQTPMHFPAAPQAPY 353
Query: 243 MGGRKFQ------------NNKDDRTNSLTIGVA-------------DEHIGFVVGRGGR 277
G Q + T +G A ++ +G ++G+GG
Sbjct: 354 GGAGPHQPAPFVGGPQQPTPGRGPPTAPAPVGAAMPGQPLTQQIYIPNDMVGAIIGKGGA 413
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
I EI +SG+ IK+++ + ++ER VTI+G
Sbjct: 414 KINEIRHLSGSVIKINEPQE---SSNERLVTITG 444
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ +PN G+IIGK GA I S +VIKI+ S N+RLVT+TGT
Sbjct: 390 GQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQESS---NERLVTITGTA 446
Query: 179 DEQMRALELILLKL 192
+ AL ++ +L
Sbjct: 447 ECNQMALYMLYSRL 460
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
V+G+GG N+ +I ++SGA+ VS D+ G ER +T+SGPQ + A +I++ +
Sbjct: 121 VIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAAAKAFGLIIRTL 174
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 8 YVPSPDVHGKRSTAPVKSLSSDPTE-------KPTYIRFLVSNPLAGAVIGKGGSTINDF 60
+ P+P V G + P + + P +P + + N + GA+IGKGG+ IN+
Sbjct: 359 HQPAPFVGGPQQPTPGRGPPTAPAPVGAAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEI 418
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SG+ I+++ E + +R++ I+GT + A+ ++ +L
Sbjct: 419 RHLSGSVIKINEPQE---SSNERLVTITGTAECNQMALYMLYSRL 460
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 14/186 (7%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
K L D IR L++ G++IGK G + F+ +SGARI +S +R
Sbjct: 7 KGLPHDAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDGS-----CPER 61
Query: 84 IIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAGA 142
I+ I+GT D I +A +L+ KL E+ + LRLI+P S CGS+IGK G+
Sbjct: 62 IVTITGTTDAIFKAFNLICKKLEEEVGGPLAGTAIPRPPITLRLIMPASQCGSLIGKGGS 121
Query: 143 TIKSFMDDSQA--VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
IK + + A V+ L +S +R VT++GT D + + I + E +
Sbjct: 122 KIKEIREITGASVVVASEMLPNS----TERAVTVSGTSDAITQCIYHICCVMLESP--PK 175
Query: 201 TMTVPY 206
T+PY
Sbjct: 176 GATIPY 181
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
S + V +E IG ++G+GG I EI QISGA I++S+ D S +SER +TI+G S+
Sbjct: 269 QSQEMAVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEDRES-SSERTITITGTAESV 327
Query: 317 RTAESMIMQKVA 328
A+ +I ++A
Sbjct: 328 ALAQYLINTRLA 339
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V N L G +IGKGG+ I + + SGA I++S E +++R I I+GT + + A L
Sbjct: 275 VPNELIGCIIGKGGTKIAEIRQISGAMIRISNC-EDRESSSERTITITGTAESVALAQYL 333
Query: 101 VIDKLLTELHA 111
+ +L E A
Sbjct: 334 INTRLAMETAA 344
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS + ++R +T+TGT + A
Sbjct: 273 MAVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEDRESS-SERTITITGTAESVALAQ 331
Query: 186 ELILLKLSEDTLYSQTMTVPY 206
LI +L+ +T M P+
Sbjct: 332 YLINTRLAMETAAMGMMGYPF 352
>gi|392339927|ref|XP_003753941.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|392347297|ref|XP_003749789.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|149033413|gb|EDL88214.1| insulin-like growth factor 2, binding protein 3 [Rattus norvegicus]
Length = 579
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 137/319 (42%), Gaps = 34/319 (10%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R T+P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQTSPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-- 195
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYE 352
Query: 196 ----TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
++ Q +P G+F P +PPP P Y +F
Sbjct: 353 NDIASMNLQAHLIPGLNLNALGLF------PPTSGMPPPTSGPPSAMTPPYP------QF 400
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ ++ T ++ + + +G ++G+ G++I ++S+ +GA IK++ R V
Sbjct: 401 EQSE---TETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVI 455
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+GP + A+ I K+
Sbjct: 456 ITGPPEAQFKAQGRIYGKI 474
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|391338059|ref|XP_003743379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 69/318 (21%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE---FFPGTTDRIIM 86
P K +R LV + + GA+IGK G+TI QS A++++++ + F G D++I
Sbjct: 190 PPPKELPVRMLVPSEMVGAIIGKSGATITSITQQSQAKVEVNKKNAGGIFADGQVDKVIN 249
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDV---GTKTK------LRLIVPNSSCGSII 137
I GT + +A +++ +L E ++ A + GT + LRL+ N+ G +I
Sbjct: 250 IHGTNEACSQACKRILEVMLQE--SQQPATNTMNGGTSRRRDEPITLRLLAHNNLVGRVI 307
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
G++G IK M+++ A I +S++ +R++ + G L+E +A + I K+ +
Sbjct: 308 GRSGIVIKKIMEETNAKINVSQMTDP----RERVIVIRGNLEEMSKAQQQITSKMRQ--C 361
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPV---PAVPHNTA------------------ 236
Y Q + G+ G G PPP PA+ +
Sbjct: 362 YEQDLQQ------AMMGGYGGPDLG--PPPQQIPPALSYPFHRPPLPPPPPITHPYHGGP 413
Query: 237 ----------AHYGPNMG--GR--------KFQNNKDDRTNSLTIGVADEHIGFVVGRGG 276
+ +GP G GR F D + V +G ++G GG
Sbjct: 414 NGHHGGPHHPSSFGPPGGPYGRIGMSSPSGHFYPMGDGSVEVAHVWVPSCTVGAIIGTGG 473
Query: 277 RNIMEISQISGARIKVSD 294
+I E+ + SG IKVS
Sbjct: 474 SSIREMIRASGCSIKVSQ 491
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 26 LSSDPTEKPTYIRFLVSNP--LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
+S+DP + ++R ++ P G +IG+GGST+ D Q QSGA I+L G+ D
Sbjct: 584 VSNDPQIQQGHLRIEINVPSNQVGRIIGRGGSTVKDMQRQSGAIIKLPEETSRRAGSPDE 643
Query: 84 II 85
+
Sbjct: 644 AV 645
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 132/305 (43%), Gaps = 48/305 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V++ AG +IGK G + D + ++G R +S+ PG DR++ ++G + I
Sbjct: 44 LRAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSK---VVPGVHDRVLTVTGALTGIAD 100
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A LV D L+ VG +RL++ ++ G+IIG+ G IK D S +
Sbjct: 101 AYGLVADSLVKGAPQMGMGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 160
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTV- 204
V + L S +R+V + GT D +A+ I L +D LYS + V
Sbjct: 161 MVAQKEMLPQS----TERIVEVQGTPDGIQKAVWEIGKCLVDDEQRGYGTVLYSPAVRVQ 216
Query: 205 ----PY--TYAGVFFSGFHGMPY------------GAVPPPVPAVPHNTAAHYGPNMGGR 246
P T A V +G P GA P P++ GP
Sbjct: 217 GGGPPLNGTGAPVGPGAGYGAPRSYNRTGNGADFTGAAP-----APYSPRRQEGP----L 267
Query: 247 KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERK 306
N + + I + + +G ++GRGG I EI + SGARI ++ T ER
Sbjct: 268 PTTNEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKA--PHDETGERM 325
Query: 307 VTISG 311
TI+G
Sbjct: 326 FTITG 330
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 97 AVDLVIDKLL-------TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
AVD ID L T+ H + + + LR IV + G IIGKAG + +
Sbjct: 10 AVDSGIDNLADKIGALNTDDHPRTEEEYAQAQLTLRAIVTSKEAGVIIGKAGQNVADLRE 69
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
+ +S++ G++DR++T+TG L
Sbjct: 70 KTGVRAGVSKV---VPGVHDRVLTVTGAL 95
>gi|18858571|ref|NP_571566.1| insulin-like growth factor 2 mRNA-binding protein 3 [Danio rerio]
gi|82248267|sp|Q9PW80.1|IF2B3_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=Decapentaplegic and Vg-related 1 RNA-binding
protein; AltName: Full=IGF-II mRNA-binding protein 3;
AltName: Full=VICKZ family member 3; AltName: Full=Vg1
RNA-binding protein; Short=Vg1-RBP
gi|5596632|gb|AAD45610.1|AF161270_1 Vg1 RNA binding protein [Danio rerio]
gi|28278436|gb|AAH45873.1| Insulin-like growth factor 2 mRNA binding protein 3 [Danio rerio]
gi|182889884|gb|AAI65768.1| Igf2bp3 protein [Danio rerio]
Length = 582
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 154/342 (45%), Gaps = 38/342 (11%)
Query: 4 NESSYVPSPDVHGKRSTAP-------VKSLSSDPT-EKPTYIRFLVSNPLAGAVIGKGGS 55
+E++ +P V G+R P SL + P + +R LV GA+IGK G+
Sbjct: 156 DETAAADAPAVGGRRGFNPRGPPRQGSPSLGARPKLQSDVPLRLLVPTQFVGAIIGKEGA 215
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TI + Q+ ++I + R G ++ I + T + A +++ + E A D
Sbjct: 216 TIRNITKQTHSKIDIHRKENA--GAAEKPITVHSTPEGCSSACRNIMEIMQKE--AID-- 269
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTL 174
+ + L+++ N+ G +IGK G +K D+ I IS L D + Y +R +T+
Sbjct: 270 TKITEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYN-PERTITV 328
Query: 175 TGTLDEQMRALELILLKLSED------TLYSQTMTVPYTYAGVFFSG---FHGMPYGAVP 225
GTLD +A E I+ K+ E ++ Q+ +P G+ + F G G +
Sbjct: 329 KGTLDACAKAEEEIMKKVRESYENDVAAMHLQSNLIP----GLNLNALGLFPGAASGGIS 384
Query: 226 PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQI 285
P V + P G G + F + T L I +G ++G+ G++I ++S+
Sbjct: 385 PSVVSGPPP-----GAQAGYQSFGAQMESETVHLFIPAL--AVGAIIGKQGQHIKQLSRF 437
Query: 286 SGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+GA IK++ +R V ISGP + A+ I K+
Sbjct: 438 AGASIKIAPADGI--DAKQRMVIISGPPEAQFKAQGRIFGKL 477
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 62/214 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT---LDE 180
LRL+VP G+IIGK GATI++ + + I I R +++ G ++ +T+ T
Sbjct: 197 LRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENA--GAAEKPITVHSTPEGCSS 254
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K + DT ++ + P+ + HN
Sbjct: 255 ACRNIMEIMQKEAIDTKITEEI------------------------PLKILAHNN----- 285
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I Q + +I +S D
Sbjct: 286 --------------------------FVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTL 319
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV +Y +D
Sbjct: 320 YNPERTITVKGTLDACAKAEEEIMKKVRESYEND 353
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + R+++ISG + +A + KL
Sbjct: 421 GAIIGKQGQHIKQLSRFAGASIKIAPADGI--DAKQRMVIISGPPEAQFKAQGRIFGKLK 478
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
E + G K +++L VP+ + G +IGK G T+ + + A + + R D
Sbjct: 479 EE-------NFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPR-DQ 530
Query: 163 SYYGLNDRLVTLTG 176
+ + +V +TG
Sbjct: 531 TPDENDQVVVKITG 544
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 149/330 (45%), Gaps = 56/330 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DE 93
I+ + S+ G VIGKGGSTI + SG+ I+++ S D +I ++ T D
Sbjct: 318 IKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANH--DDDCVITVTATESPDDL 375
Query: 94 ILRAVDLVIDKLLTE-LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
AV+ V+ LL E ++ ED+ K K++L+VP+ G IIGK+G+ I ++
Sbjct: 376 KSMAVEAVL--LLQEKINDEDEE-----KVKMQLLVPSKVIGCIIGKSGSIISEIRKRTK 428
Query: 153 AVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY-----SQTMTVP 205
A I IS+ ++ ND LV ++G + + AL I+L+L +D L S+
Sbjct: 429 ANIHISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDREIGSRNQPPA 488
Query: 206 YTYAGVFFSGFHGMPYGAVP-------PPVPAVPHNTAAHYGPNM------------GGR 246
+ FFS A+P P V +V + G +M G
Sbjct: 489 RSENNNFFSSGSSNTGLALPSSFMSSVPQVASVDFDRRPETGSSMSMLPSSGGLYGYGSF 548
Query: 247 KFQNNKDD--------------RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
NN ++ ++ + + +G V+GRGG N+ I +ISGA I++
Sbjct: 549 PVGNNSYGSKSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEI 608
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESM 322
SD + G R ISG RTAE++
Sbjct: 609 SDSKNSHGG---RIALISGTPEQKRTAENL 635
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 134/313 (42%), Gaps = 61/313 (19%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI------ 91
R L + + G+VIGK G IN + ++ ARI++ + FPG ++R+I I ++
Sbjct: 46 RILCPSGVMGSVIGKSGKVINLIRQETRARIKVV---DPFPGCSERVITIFCSVTEKKDI 102
Query: 92 ------------------DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSC 133
D +L+ D ++ L T AE+ D + RL+VP+S C
Sbjct: 103 IDIEHSELNYSIPLCSAQDALLKVHDAIVASLATA--AENTKIDRDDIRECRLLVPSSQC 160
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRAL 185
++IGK+G+ IK ++A +K+ D H+ D +V ++G ++ + + A+
Sbjct: 161 SNVIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLISGESESVKKALFAV 220
Query: 186 ELILLKLSEDTLYSQTMTVPYTYAGVFF-SGFHGMPYGAVPP---PVPAVPHNTAAHYG- 240
I+ K+S TV A + S P G + P P+ N ++ G
Sbjct: 221 SAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQGGLYPNQDPIFQHGANVSSFIGT 280
Query: 241 -PNMGGRKFQN----------------NKDDRTNSLTIGV--ADEHIGFVVGRGGRNIME 281
P G N ++ L I V + IG V+G+GG I
Sbjct: 281 LPQGYGESAANPMPVFSASALPVVHGFGGSSKSEKLVIKVICSSSKIGRVIGKGGSTIKG 340
Query: 282 ISQISGARIKVSD 294
I Q SG+ I+V+D
Sbjct: 341 IRQASGSHIEVND 353
>gi|17384400|emb|CAD13196.1| hnRNP-E2 protein copy b [Xenopus laevis]
Length = 251
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 30/248 (12%)
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
+A ++IDKL ++ + +K LRL+VP S CGS+IGK G IK + +
Sbjct: 1 FKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 60
Query: 153 AVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY---- 206
A ++++ L +S +R +T+ G + ++ I + + E + +T+PY
Sbjct: 61 AQVQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKP 114
Query: 207 TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTA---AHYGPNMGGRK-FQNNKD--DR 255
+ + V F+G G Y A+P P H A +H+ + G F D +
Sbjct: 115 SSSPVIFAG--GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQ 172
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
S + + ++ IG ++GR G I EI Q+SGA+IK+++ G+++R+VTI+G S
Sbjct: 173 ATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VEGSNDRQVTITGSTAS 229
Query: 316 IRTAESMI 323
I A+ +I
Sbjct: 230 ISLAQYLI 237
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 64/228 (28%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 22 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 79
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+G I+ V + +
Sbjct: 80 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD 139
Query: 106 LTELH--AEDQA----------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 140 LTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEI 199
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G NDR VT+TG+ A LI ++LS +
Sbjct: 200 RQMSGAQIKIA---NPVEGSNDRQVTITGSTASISLAQYLINVRLSSE 244
>gi|241956728|ref|XP_002421084.1| RNA-binding protein, putative [Candida dubliniensis CD36]
gi|223644427|emb|CAX41241.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 377
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 38/301 (12%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG G I+ ++++ + +SR PG+ +RI+ +SG +D+ +A
Sbjct: 84 RVLVSAKEAGCLIGTNGQVIDSIRNETSTKAGISR---LIPGSHERILTVSGKLDDCAKA 140
Query: 98 VDLVIDKL------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ L L +L + +D T LRL++PNS G++IG G I+
Sbjct: 141 LSYFAQALINGNIENYNYFPLKQLSSTPNTNDT---TILRLLIPNSQMGTLIGFKGIRIQ 197
Query: 146 SFMDDSQAVIKISRLDHSYY-GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
++ + S+ S+ G N+RLV L GT+D+ +L +I L ED +S +
Sbjct: 198 QLQNNYNISMIASK---SFLPGSNERLVELQGTVDDLYDSLRIISRCLIED--FSSIVGT 252
Query: 205 PYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
Y +P G HN + G TI
Sbjct: 253 TYY-----------VPRGNTYSHSHNHNHNHNNNSTGVGAGSGVGGGSGAGKTIDTISFP 301
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
++ +G ++G+ G I + ++SGA I +S + G +ER TI+G S+ A+ MI
Sbjct: 302 NDIVGALIGKRGSRIDGVRKVSGAMIAIS---EIIEGENERIFTITGSSHSVEKAKQMIY 358
Query: 325 Q 325
Q
Sbjct: 359 Q 359
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 22 PVKSLSSDP-TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P+K LSS P T T +R L+ N G +IG G I Q Q+ I + S F PG+
Sbjct: 160 PLKQLSSTPNTNDTTILRLLIPNSQMGTLIGFKGIRIQ--QLQNNYNISMIASKSFLPGS 217
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------------- 120
+R++ + GT+D++ ++ ++++ ED + VGT
Sbjct: 218 NERLVELQGTVDDLYDSL-----RIISRCLIEDFSSIVGTTYYVPRGNTYSHSHNHNHNH 272
Query: 121 --------------------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL 160
KT + PN G++IGK G+ I S A+I IS +
Sbjct: 273 NNNSTGVGAGSGVGGGSGAGKTIDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIAISEI 332
Query: 161 DHSYYGLNDRLVTLTGTLDEQMRALELI 188
G N+R+ T+TG+ +A ++I
Sbjct: 333 IE---GENERIFTITGSSHSVEKAKQMI 357
>gi|301771920|ref|XP_002921378.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 2 [Ailuropoda melanoleuca]
Length = 582
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 128/302 (42%), Gaps = 33/302 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP--YTY 208
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 209 AGVFFSGFHGMPYGAVPPP---VPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVAD 265
A F GMP PP P PHN+ F + + T L I
Sbjct: 372 ALGLFPPTSGMPPPTSGPPSAMTPPYPHNS------------FTRSSETETVHLFIPALS 419
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I
Sbjct: 420 --VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYG 475
Query: 326 KV 327
K+
Sbjct: 476 KI 477
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 421 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 478
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 479 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 534
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 535 NDQVVVKITG 544
>gi|148665205|gb|EDK97621.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_b
[Mus musculus]
Length = 564
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 146/331 (44%), Gaps = 34/331 (10%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 171 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 230
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 231 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 286
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 287 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 343
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 344 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 403
Query: 231 VP--HNTAAH-------YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
P H A H Y + G ++ ++++ + + +G ++G+ G +I +
Sbjct: 404 SPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQ 463
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+++ +GA IK++ SER V I+GP
Sbjct: 464 LARFAGASIKIAPAEG--PDVSERMVIITGP 492
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 207 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 264
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ VP AH G
Sbjct: 265 ACRMILEIMQKEADETKLAEE-----------------------------VPLKILAHNG 295
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 296 --------------------------FVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 329
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 330 YNPERTITVRGTIEACANAEIEIMKKLREAFENDML 365
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 54/202 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A I IS + +R++TL G + +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I+ KL ED S T + A PPV
Sbjct: 71 AFAMIIDKLEEDISSSMTNST-----------------AASRPPV--------------- 98
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 99 --------------TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNST 142
Query: 304 ERKVTISG-PQRSIRTAESMIM 324
ER +TI+G PQ I + + +
Sbjct: 143 ERAITIAGIPQSIIECVKQICV 164
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|119480179|ref|XP_001260118.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408272|gb|EAW18221.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 464
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 161/394 (40%), Gaps = 79/394 (20%)
Query: 3 TNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+ E+ + S HG+R+T+ + +IR ++S+ A VIGKGG ++ +
Sbjct: 80 STETQPIQSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRR 139
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT 122
SGA+ +S ++ G +RI+ +SG D + +A L+I L E D +KT
Sbjct: 140 LSGAKCTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTLNNE--PLDAPSTAQSKT 194
Query: 123 -KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
LRL++P+ GSIIGK G+ I+ + S A + S D ++R + + G D
Sbjct: 195 YPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNAS--DSCLPLSSERSLVILGVADSV 252
Query: 182 MRALELILLKLSED----------TLYS------------QTMTVPYT------------ 207
A + + L E + Y+ VPY
Sbjct: 253 HIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPE 312
Query: 208 -------YAGVFFSGFHGMP-----------------YGAVP--PPVPAVPHNTAAHYGP 241
+ +G +G+P YGA P P A PH A + P
Sbjct: 313 HFKRHHPHPNRAAAGAYGVPYLHGQPAPAPVAQPALHYGAAPHAPYAGAGPHQPAPYGAP 372
Query: 242 NMGGRKFQNNKDDRTNSLTIG--------VADEHIGFVVGRGGRNIMEISQISGARIKVS 293
+ + G + ++ +G ++G+GG I EI +SG+ IK++
Sbjct: 373 QPAQARGAPTPATPVGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKIN 432
Query: 294 DRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ + ++ER VTI+G Q + A M+ ++
Sbjct: 433 EPQE---NSNERLVTITGTQECNQMALYMLYSRL 463
>gi|389751124|gb|EIM92197.1| hypothetical protein STEHIDRAFT_89021 [Stereum hirsutum FP-91666
SS1]
Length = 339
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 146/315 (46%), Gaps = 44/315 (13%)
Query: 19 STAPVKSLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
S +P +S S P + +R LVS AG +IGK G + D + Q+G + +S+
Sbjct: 12 SASPHQSRSPSPAGQDVLTLRALVSTKDAGVIIGKAGKNVADLRDQTGVKAGVSK---VI 68
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHA-EDQADDVGTKTKLRLIVPNSSCGSI 136
PG +R++ ++G +D + +A L+I +L+ A + G+ T +RL++ ++ G+I
Sbjct: 69 PGVHERVLTVTGAVDSVAKAYALIIAQLVEANPASPSVSSSSGSHTSIRLLISHNLMGTI 128
Query: 137 IGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IG+ G IK+ D S A + S+ L S +R+V + G+ + RA+E I L E
Sbjct: 129 IGRNGLKIKAIQDGSGARMVASKDMLPQS----TERVVDVQGSPESIGRAIEEIGRCLLE 184
Query: 195 DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD 254
D + + + + GV G GA A +Y + GR+ +N +
Sbjct: 185 D--WERGLGTVLYHPGVADERSGGSMGGA---------GRRAHNYSGSYSGRR--SNAGE 231
Query: 255 RTNSLT------------------IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
+ T I + + +G ++GRGG I EI ++SG++I ++
Sbjct: 232 MSTRATSPPSPESPSQAANLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAK-- 289
Query: 297 DFFSGTSERKVTISG 311
T ER TI G
Sbjct: 290 APHDETGERMFTIVG 304
>gi|159129031|gb|EDP54145.1| KH domain RNA binding protein [Aspergillus fumigatus A1163]
Length = 464
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 161/394 (40%), Gaps = 79/394 (20%)
Query: 3 TNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+ E+ + S HG+R+T+ + +IR ++S+ A VIGKGG ++ +
Sbjct: 80 STETQPIQSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRR 139
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT 122
SGA+ +S ++ G +RI+ +SG D + +A L+I L E D +KT
Sbjct: 140 LSGAKCTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTLNNE--PLDAPSTAQSKT 194
Query: 123 -KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
LRL++P+ GSIIGK G+ I+ + S A + S D ++R + + G D
Sbjct: 195 YPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNAS--DSCLPLSSERSLVILGVADSV 252
Query: 182 MRALELILLKLSED----------TLYS------------QTMTVPYT------------ 207
A + + L E + Y+ VPY
Sbjct: 253 HIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPE 312
Query: 208 -------YAGVFFSGFHGMP-----------------YGAVP--PPVPAVPHNTAAHYGP 241
+ +G +G+P YGA P P A PH A + P
Sbjct: 313 HFKRHHPHPNRAAAGAYGVPYLHGQPAPAPVAQPALHYGAAPHAPYAGAGPHQPAPYGAP 372
Query: 242 NMGGRKFQNNKDDRTNSLTIG--------VADEHIGFVVGRGGRNIMEISQISGARIKVS 293
+ + G + ++ +G ++G+GG I EI +SG+ IK++
Sbjct: 373 QPAQARGAPTPATPVGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKIN 432
Query: 294 DRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ + ++ER VTI+G Q + A M+ ++
Sbjct: 433 EPQE---NSNERLVTITGTQECNQMALYMLYSRL 463
>gi|70989551|ref|XP_749625.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
gi|66847256|gb|EAL87587.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
Length = 464
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 161/394 (40%), Gaps = 79/394 (20%)
Query: 3 TNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+ E+ + S HG+R+T+ + +IR ++S+ A VIGKGG ++ +
Sbjct: 80 STETQPIQSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRR 139
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT 122
SGA+ +S ++ G +RI+ +SG D + +A L+I L E D +KT
Sbjct: 140 LSGAKCTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTLNNE--PLDAPSTAQSKT 194
Query: 123 -KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
LRL++P+ GSIIGK G+ I+ + S A + S D ++R + + G D
Sbjct: 195 YPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNAS--DSCLPLSSERSLVILGVADSV 252
Query: 182 MRALELILLKLSED----------TLYS------------QTMTVPYT------------ 207
A + + L E + Y+ VPY
Sbjct: 253 HIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPE 312
Query: 208 -------YAGVFFSGFHGMP-----------------YGAVP--PPVPAVPHNTAAHYGP 241
+ +G +G+P YGA P P A PH A + P
Sbjct: 313 HFKRHHHHPNRAAAGAYGVPYLHGQPAPAPVAQPALHYGAAPHAPYAGAGPHQPAPYGAP 372
Query: 242 NMGGRKFQNNKDDRTNSLTIG--------VADEHIGFVVGRGGRNIMEISQISGARIKVS 293
+ + G + ++ +G ++G+GG I EI +SG+ IK++
Sbjct: 373 QPAQARGAPTPATPVGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKIN 432
Query: 294 DRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ + ++ER VTI+G Q + A M+ ++
Sbjct: 433 EPQE---NSNERLVTITGTQECNQMALYMLYSRL 463
>gi|67523265|ref|XP_659693.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
gi|40745765|gb|EAA64921.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
Length = 745
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 152/360 (42%), Gaps = 78/360 (21%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 109 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAVA 165
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E D A +KT LRL++P+ GSIIGK G I+ D S A
Sbjct: 166 KAFGLIIRTLNNE--PLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGAR 223
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED----------TLYS----- 199
+ S D +R + + G D A + + L E + Y+
Sbjct: 224 LNAS--DACLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGG 281
Query: 200 -------QTMTVPYT--YAGVFF-----------------SGFHGMPY---GAVPPPV-- 228
VPY AG + +G +G+PY P PV
Sbjct: 282 PAGAVPGGMQVVPYVPQPAGGQYGHPDTFKRHHPGQARAGAGAYGVPYLHGQHAPAPVAP 341
Query: 229 -------PAVPHNTAAHYGPN-MGGRKFQNNKDDRTNSLTIG-------------VADEH 267
P P+ A + P G + + T + +G + ++
Sbjct: 342 QPMHYGAPQTPYAGAGPHQPTPYGAPQAAQPRGGPTPAAPVGGAMPGQPLTQQIYIPNDM 401
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+GG I EI +SG+ IK+++ + ++ER VTI+G Q + A M+ ++
Sbjct: 402 VGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQECNQMALYMLYSRL 458
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 232 PHNTAAHYGPNMGGRKFQNNKDDRTNSLTIG--VADEHIGFVVGRGGRNIMEISQISGAR 289
P + A +G G + Q D +N + I ++ + V+G+GG N+ +I ++SGA+
Sbjct: 81 PIQSTASHGEAAGNQSEQQRPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAK 140
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
VS D+ G ER +T+SGPQ ++ A +I++ +
Sbjct: 141 CTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTL 175
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ E + +R++ I+GT +
Sbjct: 389 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQE 445
Query: 93 EILRAVDLVIDKLLT 107
A+ ++ +L T
Sbjct: 446 CNQMALYMLYSRLDT 460
>gi|363746094|ref|XP_003643523.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Gallus gallus]
Length = 239
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 29/222 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ D + R
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTDAVFR 75
Query: 97 AVDLVIDKLLTELHAEDQADDVG---TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
AV ++ KL ED D T LRL++P S CGS+IGKAG I+ + S A
Sbjct: 76 AVSMIAFKL-----EEDLGDGTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRESSGA 130
Query: 154 VIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----T 207
++++ L +S +R VT++G D ++ + I + E + T+PY +
Sbjct: 131 QVQVAGDLLPNS----TERAVTVSGVPDTIIQCVRQICAVILESP--PKGATIPYHPGLS 184
Query: 208 YAGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGG 245
+ S G Y VPP ++ + +G + GG
Sbjct: 185 LGTILLSANQGFSMQGQYSGVPPAEVSLSQLCSLVHGASPGG 226
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 77/188 (40%), Gaps = 57/188 (30%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+ D R
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE-----GSCPERITTITGSTDAVFR 75
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A+ +I KL ED + TAA P
Sbjct: 76 AVSMIAFKLEED-----------------------------------LGDGTAAGRTPV- 99
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + + G ++G+ G I EI + SGA+++V+ GD ++
Sbjct: 100 --------------TLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQVA--GDLLPNST 143
Query: 304 ERKVTISG 311
ER VT+SG
Sbjct: 144 ERAVTVSG 151
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + SGA++Q+ + + P +T+R + +SG D
Sbjct: 98 PVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQV--AGDLLPNSTERAVTVSGVPDT 155
Query: 94 ILRAVDLVIDKLL 106
I++ V + +L
Sbjct: 156 IIQCVRQICAVIL 168
>gi|398397391|ref|XP_003852153.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
gi|339472034|gb|EGP87129.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
Length = 362
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 52/308 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V++ AG +IGK G + D + ++G R +S+ PG DR++ ++G + I
Sbjct: 43 LRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSK---VVPGVHDRVLTVTGALTGIAD 99
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A LV D L+ VG+ +RL++ ++ G+IIG+ G IK D S +
Sbjct: 100 AYGLVADSLVKGAPQMGMGGVVGSPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 159
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTV- 204
V + L S +R+V + GT + +++ I L +D LYS + V
Sbjct: 160 MVAQKEMLPQS----TERIVEVQGTPEGIQKSVWEIGKCLIDDEQRGYGTVLYSPAVRVQ 215
Query: 205 ---PYTYAGVFFSGF------------------HGMPYGAVPPPVPAVPHNTAAHYGPNM 243
P G GF G P + PP N + GP
Sbjct: 216 GGAPPAINGASPVGFGGGAPRSFARTGNGADFTSGAPASSYPPR-----RNGGSDAGPPP 270
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
++ +D +T +++I + +G ++GRGG I EI + SGARI ++ SG
Sbjct: 271 ---VVEDGEDIQTQNISI--PADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDESG-- 323
Query: 304 ERKVTISG 311
ER TI+G
Sbjct: 324 ERMFTITG 331
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 53/188 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G T+K ++S A I IS + +R+VT+TG D +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K ED + S + + P T PPV
Sbjct: 103 AFAMIAYKFEEDIINSMSNS-PATSK----------------PPV--------------- 130
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 131 --------------TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA--GDMLPNST 174
Query: 304 ERKVTISG 311
ER VTISG
Sbjct: 175 ERAVTISG 182
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSALSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|431908994|gb|ELK12585.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Pteropus
alecto]
Length = 613
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 128/300 (42%), Gaps = 31/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G+++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ + T L I
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQQSETETVHLFIPALS-- 417
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 418 VGAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKI 475
>gi|332242549|ref|XP_003270447.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Nomascus leucogenys]
Length = 579
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G+++ +A E I+ K+ E ++ QT +P
Sbjct: 312 ISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNVQTHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 372 DLGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 416
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 474
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|218190341|gb|EEC72768.1| hypothetical protein OsI_06421 [Oryza sativa Indica Group]
Length = 658
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 32/241 (13%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IGK G TI + Q QSGA+IQ++R + PG+ R + +SGT D+I RA L
Sbjct: 108 IPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQISRAEQL 167
Query: 101 VIDKLLTELHAEDQADDVGTKT--------KLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
I+++L E A + K + ++ + N+ G +IGK G TIKS S
Sbjct: 168 -INEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANNKVGLVIGKGGETIKSMQAKSG 226
Query: 153 AVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSEDTL-------YS---- 199
A I++ L H G +R V + GT ++ A +L++ SE+ YS
Sbjct: 227 ARIQVVPL-HLPPGDPATERTVYIDGTQEQIETAKQLVIEVTSENRARNPMSGGYSQQGY 285
Query: 200 -----QTMTVPYTYAGVFFSGFHGMPYGAVP--PPVPAVPHNTAAHYGPNMGGRKFQNNK 252
Q+ P+ A + G+ M GA P PP P Y P GG +Q
Sbjct: 286 RPPRPQSNWGPHGGAPMQQPGYGYMQPGAYPGAPPQYGAPQQPYGSYPPASGG--YQTGW 343
Query: 253 D 253
D
Sbjct: 344 D 344
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 48/208 (23%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T + +PN G IIGK+G TIK+ S A I+++R + G R V L+GT D+
Sbjct: 102 TSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQI 161
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
RA +LI L+E A SG
Sbjct: 162 SRAEQLINEVLAE--------------ADAASSG-------------------------- 181
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS----DRGD 297
N+ RK+ N + + +A+ +G V+G+GG I + SGARI+V GD
Sbjct: 182 NLSSRKY-NAPQPGADQFQMKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPLHLPPGD 240
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ER V I G Q I TA+ ++++
Sbjct: 241 P---ATERTVYIDGTQEQIETAKQLVIE 265
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
S TI + + +G ++G+ G I + SGA+I+V+ D G+ R V +SG I
Sbjct: 103 SKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQIS 162
Query: 318 TAESMIMQKVAYA 330
AE +I + +A A
Sbjct: 163 RAEQLINEVLAEA 175
>gi|58266068|ref|XP_570190.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134110914|ref|XP_775921.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258587|gb|EAL21274.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226423|gb|AAW42883.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 365
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 161/365 (44%), Gaps = 68/365 (18%)
Query: 9 VPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARI 68
+PSPD HG E +R LVS AG +IGK G+TI + +G +
Sbjct: 19 LPSPDAHG--------------AEHQLSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKA 64
Query: 69 QLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA---DDVGTKTKLR 125
+S+ G DR++ ++G ++ + A V +LL E D + VG+ T +R
Sbjct: 65 GVSK---VVQGVQDRVLSVTGDLEGVASAYAEVA-RLLLETPLSDSSLPPPPVGSFTSIR 120
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMR 183
L++ ++ G++IG++G IK D S A + S+ L S +R+V + G++D
Sbjct: 121 LLISHNLMGTVIGRSGLKIKQIQDMSGARMVASKEMLPQS----TERVVEVQGSVDAIKT 176
Query: 184 ALELILLKLSEDT-----------------------LYSQTMT-----VPYTYAGVFFSG 215
A+ I L ED L +Q +T + T F G
Sbjct: 177 AVLEIGKCLLEDWDRGAGTVLYHPGAAGDAGVLAGGLGAQAVTGSTGGIRRTSVAAGFGG 236
Query: 216 FHG--MPY--GAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFV 271
+ G P G++ + P + P+ G + N+ + RT +++I + +G +
Sbjct: 237 YSGDRRPSRGGSI-----SGPSGVSGERRPSEGPQVNLNDPNLRTQNISI--PSDMVGCI 289
Query: 272 VGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYAS 331
+GRGG I EI ++SG+RI ++ T ER TI G + A ++ ++
Sbjct: 290 IGRGGSKITEIRRLSGSRISIAKV--PHDETGERMFTIQGTPEATERALMLLYSQLESEK 347
Query: 332 DRLMD 336
+R ++
Sbjct: 348 ERRVN 352
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 137/314 (43%), Gaps = 50/314 (15%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS--------- 88
R L P G+VIGKGGS I + +SGA+I+++ + PG +R+I+IS
Sbjct: 6 RILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIA---DAIPGVDERVILISSTDRGNDRG 62
Query: 89 ----GTIDEILRAVD--------LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSI 136
G +E+ A + ++ D + + DQ ++ + RL+VPN+ G +
Sbjct: 63 RGKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIGCL 122
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+GK G I+ + A I++ D D LV ++G + +AL I +L E
Sbjct: 123 LGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARLQE 182
Query: 195 DTLYS--QTMTVP---------YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+ Q+ P Y + S G +G P P+ ++ N+
Sbjct: 183 NPPRDRPQSYAAPAPAFVPVTDYLAKDSYRSKGTGHVFGLGPEPLEGRSWTISSG---NL 239
Query: 244 G-----GRKFQNNKDDRTNSLT--IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
R+ + +D N L + + IG V+G+GG I + + +GARIK++
Sbjct: 240 SLDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIA--- 296
Query: 297 DFFSGTSERKVTIS 310
+ G+ ER + +S
Sbjct: 297 NAVPGSDERVIIVS 310
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D E R L + G+VIGKGGS I++ + +GARI+++ + PG+ +R+I++S
Sbjct: 254 DSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANA---VPGSDERVIIVS 310
Query: 89 GTI---DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
D A++ +I ++ + + AE D G T RL+VP + G ++GK G+ I+
Sbjct: 311 ALELPGDSFSPALEAMI-QVQSRITAEMGGDKDGIITT-RLLVPTNQIGCLLGKGGSIIE 368
Query: 146 SFMDDSQAVIKI 157
++A I++
Sbjct: 369 DMRRATRANIRV 380
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG 215
V F+G
Sbjct: 185 TPVIFAG 191
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 53/188 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G T+K ++S A I IS + +R+VT+TG D +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K ED + S + N+ A P +
Sbjct: 71 AFAMIAYKFEEDIINSMS--------------------------------NSPATSKPPV 98
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 99 --------------TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA--GDMLPNST 142
Query: 304 ERKVTISG 311
ER VTISG
Sbjct: 143 ERAVTISG 150
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|449546975|gb|EMD37943.1| hypothetical protein CERSUDRAFT_82176 [Ceriporiopsis subvermispora
B]
Length = 433
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 8/145 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IGKGGS +N+ + QSGAR+ +S E PG +RI+ +SG +D +
Sbjct: 113 HMRCLIVTQDASIIIGKGGSHVNEIREQSGARVVVS---ESIPGNPERILNVSGPLDAVS 169
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L++ ++ E D+ G++ ++ ++PNS GS+IGK G IK D S A
Sbjct: 170 KAFGLIVRRINDEPF--DKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGAR 227
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLD 179
+ S + G +R+++++G D
Sbjct: 228 LNAS--EGMLPGSTERVLSVSGVAD 250
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V+ ++ +P +KP+ I+F++ N G+VIGKGG+ I + Q SGAR L+ S
Sbjct: 176 VRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGAR--LNASEG 233
Query: 76 FFPGTTDRIIMISGTIDEI 94
PG+T+R++ +SG D I
Sbjct: 234 MLPGSTERVLSVSGVADAI 252
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + +
Sbjct: 71 AFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG 215
A V F+G
Sbjct: 185 APVIFAG 191
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 53/188 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G T+K ++S A I IS + +R+VT+TG D +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K ED + S + N+ A P +
Sbjct: 71 AFAMIAYKFEEDIINSMS--------------------------------NSTATSKPPV 98
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +G++++V+ GD ++
Sbjct: 99 --------------TLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQVA--GDMLPNST 142
Query: 304 ERKVTISG 311
ER VTISG
Sbjct: 143 ERAVTISG 150
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +G+++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|225563195|gb|EEH11474.1| KH domain RNA binding protein [Ajellomyces capsulatus G186AR]
gi|240275775|gb|EER39288.1| KH domain RNA-binding protein [Ajellomyces capsulatus H143]
Length = 495
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 153/370 (41%), Gaps = 83/370 (22%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A IGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGMQDAVA 194
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK+G I+ + S A
Sbjct: 195 KAFGLIIRTLNNEPLEAPSTAQ---SKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGA 251
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED----------TLYS---- 199
+ S D +R + + G D A + + L E + Y+
Sbjct: 252 RLNAS--DSCLPLSTERTLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSG 309
Query: 200 --------QTMTVPYT--YAG------------------VFFSGFHGMPYGAVPPPVPAV 231
VPY AG V +G +G+PY P P +
Sbjct: 310 GAAGVVPGGMQVVPYVPQPAGGQYGHPDTFKRHQPPGNRVVSTGGYGVPYVHGQPGQPQM 369
Query: 232 PHNTAAHYG------------------------PNMGGRKFQNNK---DDRTNSLTIGVA 264
PH A HYG P GG Q + I +
Sbjct: 370 PHQ-ALHYGSSSRPGYSGAGPHQPAPYGAPQPAPVHGGPSAQPAGGVVPGAPVTQQIFIP 428
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
++ +G ++G+GG I EI +SG+ IK+++ D ++ER VTI+G + A M+
Sbjct: 429 NDMVGAIIGKGGAKINEIRHLSGSVIKINEPQD---NSNERLVTITGTPECNQMALYMLY 485
Query: 325 QKVAYASDRL 334
++ R+
Sbjct: 486 SRLESEKHRI 495
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 201 IRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS-- 258
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 259 CLPLSTERTLVILGVADAVHIATYYVAVTLVEQL 292
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P+P VHG S P + P + + N + GA+IGKGG+ IN+ + SG+ I+
Sbjct: 400 PAP-VHGGPSAQPAGGVVPG---APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIK 455
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 456 INEPQD---NSNERLVTITGTPECNQMALYMLYSRLESEKH 493
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 187 SSSPVIFAG 195
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 54/210 (25%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D + +RL++ GSIIGK G ++K ++S A R++ S +R++TL
Sbjct: 8 DGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGA-----RINISEGNCPERIITLA 62
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
G + +A +I+ KL ED S +MT ++T
Sbjct: 63 GPTNAIFKAFAMIIDKLEED--ISSSMT-----------------------------NST 91
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
AA P +L + V G ++G+GG I EI + +GA+++V+
Sbjct: 92 AASRPP---------------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA-- 134
Query: 296 GDFFSGTSERKVTISG-PQRSIRTAESMIM 324
GD ++ER +TI+G PQ I + + +
Sbjct: 135 GDMLPNSTERAITIAGIPQSIIECVKQICV 164
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETL 170
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|403287927|ref|XP_003935171.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Saimiri boliviensis boliviensis]
Length = 579
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 136/319 (42%), Gaps = 34/319 (10%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQGSPGSVFKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-- 195
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYE 352
Query: 196 ----TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
++ Q +P G+F P +PPP P Y +F
Sbjct: 353 NDIASMNLQAHLIPGLNLNALGLF------PPTSGMPPPTSGPPSAMTPPYP------QF 400
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ ++ T ++ + + +G ++G+ G++I ++S+ +GA IK++ R V
Sbjct: 401 EQSE---TETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVI 455
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+GP + A+ I K+
Sbjct: 456 ITGPPEAQFKAQGRIYGKI 474
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 138/337 (40%), Gaps = 66/337 (19%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
ST PV + + IR L G VIGKGGSTI + SGARI++ +
Sbjct: 290 STVPVVPSFGNTSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRD 349
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
+I D AV+ + LL + D+ +D+ +R +VP+ G IIG
Sbjct: 350 ECIITVIATESPDDLKSMAVEAI---LLLQGKINDEDNDI---VGIRFLVPSKVIGCIIG 403
Query: 139 KAGATIKSFMDDSQAVIKISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
K+GA + + A + IS++D ND LV + G + AL I+L+L +D L
Sbjct: 404 KSGAIVNEIRKRTNADVCISKVDKLKCADSNDELVEVAGEVGSVRDALVQIVLRLRDDVL 463
Query: 198 YSQ---------TMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN------ 242
+ T +V +AG+ ++P +P+VP Y
Sbjct: 464 KEKDGGLNSSVGTDSVYPVHAGI-----------SIPSILPSVPPVAPMGYDQRAESGSG 512
Query: 243 ----------------MGGRKFQNNKDDRTNSLTIG----------VADEHIGFVVGRGG 276
MG + + + L G V +G V+G+GG
Sbjct: 513 LGLFSSSSLYGYGSLPMGENSYGSLASYSLSKLYEGLPPPSTLEMLVPANAVGKVIGKGG 572
Query: 277 RNIMEISQISGARIKVSD----RGD---FFSGTSERK 306
NI I +ISGA I++SD RGD + SG E+K
Sbjct: 573 ANIANIRKISGAMIEISDAKSARGDRIAYISGKPEQK 609
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 134/312 (42%), Gaps = 62/312 (19%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI--------SG 89
R L + + G+VIGK G IN +++S AR+++ + FPG R+I I
Sbjct: 39 RILCPDEVIGSVIGKSGKVINSIRNESRARVKVV---DPFPGAMYRVITIYCNVKEKGDA 95
Query: 90 TIDEILRAVDLVI---DKLLTELHAE---------DQADDVGTKTKLRLIVPNSSCGSII 137
+D+ D + D LL ++HA D K + +++VP S +II
Sbjct: 96 DVDDDFHQADPLCPAQDALL-KVHAAISNAVAALGDSDKRCRDKKECQILVPTSQSANII 154
Query: 138 GKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRALELIL 189
GKAGATIK ++A IKI+ D HS D + +TG + + + A+ I+
Sbjct: 155 GKAGATIKKLRSKTRANIKITAKDASDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIM 214
Query: 190 LKLSEDTLYSQTMTVPYTYAGVFFSGFHGM--PYGAVPPPVPAVPHNTAAHYGPNMGGR- 246
K S TVP + S + P G P P V ++ P +G
Sbjct: 215 YKFSPKEEIPLETTVPEAPPSIIISSDVPIYQPGGFYPNADPIV---SSRSVPPILGATH 271
Query: 247 --KFQNNKDDRTN----SLTIGVAD------------------EHIGFVVGRGGRNIMEI 282
+FQ D R++ S T+ V + IG V+G+GG I I
Sbjct: 272 IPEFQGYGDMRSSWPIYSSTVPVVPSFGNTSRSELIIRLLCPFDKIGRVIGKGGSTIKSI 331
Query: 283 SQISGARIKVSD 294
Q+SGARI+V D
Sbjct: 332 RQVSGARIEVDD 343
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P+ + LV G VIGKGG+ I + + SGA I++S + DRI ISG ++
Sbjct: 552 PSTLEMLVPANAVGKVIGKGGANIANIRKISGAMIEISDAKS---ARGDRIAYISGKPEQ 608
Query: 94 ILRAVDLV 101
A +L+
Sbjct: 609 KQAAENLI 616
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 54/210 (25%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D + +RL++ GSIIGK G ++K ++S A R++ S +R++TL
Sbjct: 8 DGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGA-----RINISEGNCPERIITLA 62
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
G + +A +I+ KL ED S +MT ++T
Sbjct: 63 GPTNAIFKAFAMIIDKLEED--ISSSMT-----------------------------NST 91
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
AA P +L + V G ++G+GG I EI + +GA+++V+
Sbjct: 92 AASRPP---------------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA-- 134
Query: 296 GDFFSGTSERKVTISG-PQRSIRTAESMIM 324
GD ++ER +TI+G PQ I + + +
Sbjct: 135 GDMLPNSTERAITIAGIPQSIIECVKQICV 164
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|222622454|gb|EEE56586.1| hypothetical protein OsJ_05944 [Oryza sativa Japonica Group]
Length = 674
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IGK G TI + Q QSGA+IQ++R + PG+ R + +SGT D+I RA L
Sbjct: 124 IPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQISRAEQL 183
Query: 101 VIDKLLTELHAEDQADDVGTK--------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
I+++L E A + K + ++ + N+ G +IGK G TIKS S
Sbjct: 184 -INEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANNKVGLVIGKGGETIKSMQAKSG 242
Query: 153 AVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSED 195
A I++ L H G +R V + GT ++ A +L++ SE+
Sbjct: 243 ARIQVVPL-HLPPGDPATERTVYIDGTQEQIETAKQLVIEVTSEN 286
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 48/208 (23%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T + +PN G IIGK+G TIK+ S A I+++R + G R V L+GT D+
Sbjct: 118 TSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQI 177
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
RA +LI L+E A SG
Sbjct: 178 SRAEQLINEVLAE--------------ADAASSG-------------------------- 197
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS----DRGD 297
N+ RK+ N + + +A+ +G V+G+GG I + SGARI+V GD
Sbjct: 198 NLSSRKY-NAPQPGADQFQMKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPLHLPPGD 256
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ER V I G Q I TA+ ++++
Sbjct: 257 P---ATERTVYIDGTQEQIETAKQLVIE 281
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
S TI + + +G ++G+ G I + SGA+I+V+ D G+ R V +SG I
Sbjct: 119 SKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQIS 178
Query: 318 TAESMIMQKVAYA 330
AE +I + +A A
Sbjct: 179 RAEQLINEVLAEA 191
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 25/179 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-------LRLIVPNSSCGSIIGKAGATIKSFMD 149
A ++ K ED + + T LRL+VP S CGS+IGK G+ IK +
Sbjct: 71 AFAMIAYKF-----EEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 150 DSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+ A ++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 126 STGAQVQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 53/188 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G T+K ++S A I IS + +R+VT+TG D +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K ED + S + N+ A P +
Sbjct: 71 AFAMIAYKFEEDIINSMS--------------------------------NSTATSKPPV 98
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 99 --------------TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA--GDMLPNST 142
Query: 304 ERKVTISG 311
ER VTISG
Sbjct: 143 ERAVTISG 150
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 77
Query: 326 K 326
K
Sbjct: 78 K 78
>gi|440634730|gb|ELR04649.1| hypothetical protein GMDG_06931 [Geomyces destructans 20631-21]
Length = 473
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 150/366 (40%), Gaps = 79/366 (21%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A VIGKGG + + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 120 HIRAVISSAEAATVIGKGGENVTLIRKMSGAKCTVS---DYQKGAVERILTVSGVVDAAA 176
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E DQ ++T LRL+VP+ GSIIGK G I+ + S A
Sbjct: 177 KAFGLIIRTLNGE--PLDQPSTPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQEQSGAR 234
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRA----LELILLKLSE---DTLYSQTMTVPYT 207
+ S D +R V + G D A +L +L+E S T
Sbjct: 235 LNAS--DACLPLSTERSVVVLGVADAVHIATYYVASTLLEQLTERFGGPTASAYATRSGG 292
Query: 208 YAGVFFSGFHGMPYGAVPPPVPA-------VPHN-------TAAHY--------GPNMGG 245
AGV G +PY VP P V HN AA Y GP GG
Sbjct: 293 PAGVIPGGMQVVPY--VPQPAGGNYGHPDNVRHNDIRSRQTPAAQYGQPYAQGPGPQQGG 350
Query: 246 -------------------------------------RKFQNNKDDRTNSLTIGVADEHI 268
+ Q + + I + ++ +
Sbjct: 351 ASMHYGGSPAAGYGGVAPQQPQQVGHGGPASHAGPPAQPMQGVVPGQPLTQQIYIPNDMV 410
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I EI Q+SG+ IK+++ D ++ER VTI+G + A M+ ++
Sbjct: 411 GAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTAECNQMALYMLYSRLE 467
Query: 329 YASDRL 334
R+
Sbjct: 468 SEKHRI 473
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 397 QPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTAE 453
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 454 CNQMALYMLYSRLESEKH 471
>gi|300796214|ref|NP_001179217.1| insulin-like growth factor 2 mRNA-binding protein 3 [Bos taurus]
gi|296488613|tpg|DAA30726.1| TPA: insulin-like growth factor 2 mRNA binding protein 3 [Bos
taurus]
Length = 580
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 133/319 (41%), Gaps = 33/319 (10%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQGSPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-- 195
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYE 352
Query: 196 ----TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
++ Q +P G+F P +PPP P Y +F
Sbjct: 353 NDIASMNLQAHLIPGLNLNALGLF------PPTSGMPPPTSGPPSAITPPYP------QF 400
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + T L I +G ++G+ G++I ++S+ +GA IK++ R V
Sbjct: 401 EQQSETETVHLFIPALS--VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVI 456
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+GP + A+ I K+
Sbjct: 457 ITGPPEAQFKAQGRIYGKI 475
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 419 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 476
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 477 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 532
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 533 NDQVVVKITG 542
>gi|440901500|gb|ELR52431.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Bos grunniens
mutus]
Length = 600
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 31/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ + T L I
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAITPPYP------QFEQQSETETVHLFIPALS-- 417
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 418 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 475
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 135/307 (43%), Gaps = 44/307 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 252 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 307
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 308 ISSLQDLSIYN-PERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNL 366
Query: 207 TYAGVFFSGFHGMPYGAVPPPV------PAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLT 260
+ G+F +G +PPP PA P++ A Y +
Sbjct: 367 SALGIFSTGL-----SVLPPPSGPRGAPPAAPYHPFAQY--------------PEQEIVN 407
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
+ + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP + A+
Sbjct: 408 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQ 465
Query: 321 SMIMQKV 327
I K+
Sbjct: 466 GRIFGKL 472
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 251
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 252 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 282
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 283 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 316
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 317 YNPERTITVKGTVEACANAEIEIMKKLREAFENDML 352
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 7 SYVPSPD-VHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSG 65
S +P P G AP + P ++ + + GA+IGK G+ I +G
Sbjct: 377 SVLPPPSGPRGAPPAAPYHPFAQYPEQE--IVNLFIPTQAVGAIIGKKGAHIKQLARFAG 434
Query: 66 ARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLR 125
A I+++ + P ++R+++I+G + +A + KL E + + ++V + +R
Sbjct: 435 ASIKIAPAE--GPDVSERMVIITGPPEAQFKAQGRIFGKLKEE-NFFNPKEEVKLEAHIR 491
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
VP+S+ G +IGK G T+ + + A + + R
Sbjct: 492 --VPSSTAGRVIGKGGKTVNELQNLTSAEVIVPR 523
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 48/208 (23%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 275 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAN 334
Query: 97 AVDLVIDKLLTELHAED------QADDVG------------------------------- 119
A ++ I K L E D QA+ +
Sbjct: 335 A-EIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPSGPRGAPPAAP 393
Query: 120 --------TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
+ + L +P + G+IIGK GA IK + A IKI+ + +++R+
Sbjct: 394 YHPFAQYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERM 451
Query: 172 VTLTGTLDEQMRALELILLKLSEDTLYS 199
V +TG + Q +A I KL E+ ++
Sbjct: 452 VIITGPPEAQFKAQGRIFGKLKEENFFN 479
>gi|426227471|ref|XP_004007841.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Ovis aries]
Length = 580
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 133/319 (41%), Gaps = 33/319 (10%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQGSPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-- 195
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYE 352
Query: 196 ----TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
++ Q +P G+F P +PPP P Y +F
Sbjct: 353 NDIASMNLQAHLIPGLNLNALGLF------PPTSGMPPPTSGPPSAMTPPYP------QF 400
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + T L I +G ++G+ G++I ++S+ +GA IK++ R V
Sbjct: 401 EQQSETETVHLFIPALS--VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVI 456
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+GP + A+ I K+
Sbjct: 457 ITGPPEAQFKAQGRIYGKI 475
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 419 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 476
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 477 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 532
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 533 NDQVVVKITG 542
>gi|395322965|gb|EJF55518.1| hypothetical protein DICSQDRAFT_175811 [Dichomitus squalens
LYAD-421 SS1]
Length = 280
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 38/259 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR LV A ++GK + Q ++G LS E PG ++++ + G+++
Sbjct: 14 IRALVGKKHAQVILGKNSVNLMRLQEETGVTASLS---EAIPGVGEQVLRVLGSVESATE 70
Query: 97 AVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A L+ L+ L + D T LRL++P++ GSIIG+ G IK+ S A
Sbjct: 71 AYFLIASDLIRTHPLRSTSVESDSAPTTCLRLLIPHNMLGSIIGRHGRKIKAMHASSGA- 129
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+IS +H + ++ L GT + RA+ I L ED AG
Sbjct: 130 -QISTREHMLPNSTEHIMQLCGTSESIRRAVRDICLCFLEDDELC---------AGTVL- 178
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGR 274
FH PA P ++ G R F D V + +G ++GR
Sbjct: 179 -FH-----------PAAPDQPSSPVTQPTGTRPFTREID---------VPSDMVGSIIGR 217
Query: 275 GGRNIMEISQISGARIKVS 293
GG NI E+ ++SGA I ++
Sbjct: 218 GGTNINEMKRMSGAEIVIA 236
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 20 TAPVKSLSSDPTEKPT-YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
T P++S S + PT +R L+ + + G++IG+ G I + SGA Q+S P
Sbjct: 82 THPLRSTSVESDSAPTTCLRLLIPHNMLGSIIGRHGRKIKAMHASSGA--QISTREHMLP 139
Query: 79 GTTDRIIMISGTIDEILRAV-----------DLVIDKLLTELHAEDQADD-----VGTKT 122
+T+ I+ + GT + I RAV +L +L A DQ GT+
Sbjct: 140 NSTEHIMQLCGTSESIRRAVRDICLCFLEDDELCAGTVLFHPAAPDQPSSPVTQPTGTRP 199
Query: 123 KLRLI-VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
R I VP+ GSIIG+ G I S A I I++ G+ + VT+ T D
Sbjct: 200 FTREIDVPSDMVGSIIGRGGTNINEMKRMSGAEIVIAKAPRE--GVERQTVTIVETYDAY 257
Query: 182 MRALELI 188
RA L+
Sbjct: 258 KRARTLL 264
>gi|351705765|gb|EHB08684.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Heterocephalus
glaber]
Length = 546
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 115 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 168
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 169 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 228
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G+++ +A E I+ K+ E ++ Q +P
Sbjct: 229 ISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 288
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 289 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPAPS 333
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 334 VGAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKI 391
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + P GA+IGK G I +GA I+++ + P R+++I+G + +
Sbjct: 325 VHLFIPAPSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFK 382
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGAT 143
A + K+ E + ++V + +R VP+ + G +IGK G T
Sbjct: 383 AQGRIYGKIKEENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKT 426
>gi|328774304|gb|EGF84341.1| hypothetical protein BATDEDRAFT_8525 [Batrachochytrium
dendrobatidis JAM81]
Length = 343
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 145/325 (44%), Gaps = 37/325 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG VIGKGG+++ + + + + P ++RI+ + G + + +
Sbjct: 15 LRSLVSTKEAGVVIGKGGASVANVRQIA---SVKVGVSKVVPSVSERILTVVGPLPNVAK 71
Query: 97 AVDLVIDKLLTE---LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
A L+ LL + + D T +RL+V + GSIIGKAGA I+ + S A
Sbjct: 72 AYALIAKNLLESTQTITSNGNLDSTEESTAIRLLVAHQLIGSIIGKAGAKIREIQEASGA 131
Query: 154 VIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGV 211
I +S+ + S +R+V + G +D A+ I + + D + + +PY
Sbjct: 132 KIVVSKEMMPQS----TERVVEIYGLVDAIHIAIYHIGVCMKSDNERAAGI-IPYDPQNS 186
Query: 212 FFSGFHGMPYGAVPPPVPAVPHNTA---------------------AHYGPNMGGRKFQN 250
A+ + N+ A G GG +
Sbjct: 187 LRYDSSPFSSSAIISTSRSTGRNSLTNAIGRRHSSNNSSVSSNSIRAMSGSTFGGAPASS 246
Query: 251 NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
++ T + + V + IG ++G+GG +I +I ++SGA++ V+++ SG ++R++TI
Sbjct: 247 TENPDTRTCVMTVQSDMIGCLMGKGGSHITQIRRLSGAKLHVAEQ---VSGRNDREITIV 303
Query: 311 GPQRSIRTAESMIMQKVAYASDRLM 335
G + R A S++ K+ R +
Sbjct: 304 GTDEANRKAMSLLYNKLEAEKGRRL 328
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D TE+ T IR LV++ L G++IGK G+ I + Q SGA+I +S+ E P +T+R++ I
Sbjct: 94 DSTEESTAIRLLVAHQLIGSIIGKAGAKIREIQEASGAKIVVSK--EMMPQSTERVVEIY 151
Query: 89 GTIDEILRAV 98
G +D I A+
Sbjct: 152 GLVDAIHIAI 161
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 54/202 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A I IS + +R++TL G + +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I+ KL ED S +MT ++TAA P
Sbjct: 71 AFAMIIDKLEED--ISSSMT-----------------------------NSTAASRPPV- 98
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 99 --------------TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNST 142
Query: 304 ERKVTISG-PQRSIRTAESMIM 324
ER +TI+G PQ I + + +
Sbjct: 143 ERAITIAGIPQSIIECVKQICV 164
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
>gi|452004384|gb|EMD96840.1| hypothetical protein COCHEDRAFT_1220374 [Cochliobolus
heterostrophus C5]
Length = 489
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 147/371 (39%), Gaps = 83/371 (22%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR + A +IGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 130 HIRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVS 186
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L++ + L + E + +RL++P+ GSIIGKAG I+ + S A
Sbjct: 187 KAFGLIV-RTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNA-- 243
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTY 208
K++ D +R + + G D A+ + L E SQ T
Sbjct: 244 KLNASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 303
Query: 209 AGVFFSGFHGMPYGAVPPPVPAV---PHN---------TAAHYG----PNMGGRKFQNNK 252
A V G PY VP P P N T AH G P+M G+ Q +
Sbjct: 304 ANVVPGGMSVQPY--VPQPAGGQYSHPQNFRRQEPAQRTPAHGGGYGAPHMHGQPPQQSP 361
Query: 253 DDRTN-------------------------------------------------SLTIGV 263
N + I +
Sbjct: 362 YGHPNMPYGAASPSRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGSIPGQPLTQQIFI 421
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ +G ++G+GG I EI Q+SG+ IK+++ D ++ER VTI+G Q + A M+
Sbjct: 422 PNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTD---NSNERLVTITGTQECNQMALYML 478
Query: 324 MQKVAYASDRL 334
++ R+
Sbjct: 479 YSRLESEKHRI 489
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV S+ P + + + N + GA+IGKGG+ IN+ + SG+ I++ +E +
Sbjct: 405 APVGSIPGQPLTQ----QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNS 457
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+R++ I+GT + A+ ++ +L +E H
Sbjct: 458 NERLVTITGTQECNQMALYMLYSRLESEKH 487
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 245 GRKFQNNKD-DRTNSLTI--GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
GR +N+ D TN L I + ++G+GG N+ +I ++SGA+ VS D+ G
Sbjct: 114 GRPVNSNQQVDETNWLHIRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRG 170
Query: 302 TSERKVTISGPQRSIRTAESMIMQKV 327
ER +T+SG ++ A +I++ +
Sbjct: 171 AVERILTVSGQVDAVSKAFGLIVRTL 196
>gi|302926012|ref|XP_003054209.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
gi|256735150|gb|EEU48496.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
Length = 472
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 17/227 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG +++ + S AR +S ++ G +RI+ +SG +D +
Sbjct: 113 HIRAVISSPEAATVIGKGGENVSNIRKLSNARCTVS---DYQKGAVERILTVSGIVDAVA 169
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E E T LRL++P+ GSIIGK GA I+ + S A +
Sbjct: 170 KAFGLIIRTLNNEPLNESSTSSSKT-YPLRLLIPHILIGSIIGKGGARIREIQEASGARL 228
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
S D ++R + + G D A+ + + TL Q A ++
Sbjct: 229 NAS--DACLPMSSERSLVVMGVAD----AVHIATYYVGS-TLLEQLNDRFGGPAASAYAT 281
Query: 216 FHGMPYGAVP---PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSL 259
G P G++P VP P + HYG G + + D R++ +
Sbjct: 282 RSGAPAGSIPGGMQVVPYCPQPASGHYG---RGENYARHNDRRSHHM 325
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDP------TEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + TY +R L+ + L G++IGKGG+ I + Q SGAR L+ S
Sbjct: 176 IRTLNNEPLNESSTSSSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR--LNASDA 233
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +++R +++ G D + A V LL +L+
Sbjct: 234 CLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLN 268
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 398 QIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQDNS----NERLVTITGTEECNRM 453
Query: 184 ALELILLKLSE 194
AL ++ +L E
Sbjct: 454 ALYMLYSRLGE 464
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I + ++ +G ++G+GG+ I EI Q+S + IK+++ D ++ER VTI+G + R A
Sbjct: 399 IYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQD---NSNERLVTITGTEECNRMAL 455
Query: 321 SMIMQKVAYASDR 333
M+ ++ +R
Sbjct: 456 YMLYSRLGEVQNR 468
>gi|331232797|ref|XP_003329060.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308050|gb|EFP84641.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 378
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGKGG IN+ + +SGAR +S E PG +RI+ ++G +D + +
Sbjct: 108 MRALIVTQDASIIIGKGGRHINEVREKSGARATIS---EAVPGNAERILSVAGPLDAVSK 164
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----KTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
A L++ ++ D+ DV + +R IVPNS GS+IGKAG+ IK D S
Sbjct: 165 AFGLIVRRI------NDEPFDVPSVPGSRAVTIRFIVPNSRMGSVIGKAGSKIKEIQDMS 218
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLD 179
A ++ S + G +R+++++G D
Sbjct: 219 GARVQAS--EALLPGSTERVLSISGVAD 244
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P + IRF+V N G+VIGK GS I + Q SGAR+Q S + PG+T+R++
Sbjct: 180 VPSVPGSRAVTIRFIVPNSRMGSVIGKAGSKIKEIQDMSGARVQASEA--LLPGSTERVL 237
Query: 86 MISGTIDEILRAV 98
ISG D + AV
Sbjct: 238 SISGVADAVHIAV 250
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 54/189 (28%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++R ++ IIGK G I + S A IS + G +R++++ G LD
Sbjct: 107 QMRALIVTQDASIIIGKGGRHINEVREKSGARATISE---AVPGNAERILSVAGPLDAVS 163
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
+A LI+ +++++ P+ VP+VP
Sbjct: 164 KAFGLIVRRINDE---------PFD--------------------VPSVP---------- 184
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
R ++ V + +G V+G+ G I EI +SGAR++ S+ G+
Sbjct: 185 ----------GSRAVTIRFIVPNSRMGSVIGKAGSKIKEIQDMSGARVQASEA--LLPGS 232
Query: 303 SERKVTISG 311
+ER ++ISG
Sbjct: 233 TERVLSISG 241
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
++G+GGR+I E+ + SGAR +S + G +ER ++++GP ++ A +I++++
Sbjct: 119 IIIGKGGRHINEVREKSGARATIS---EAVPGNAERILSVAGPLDAVSKAFGLIVRRI 173
>gi|452821097|gb|EME28131.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
gi|452821098|gb|EME28132.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 590
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 140/322 (43%), Gaps = 45/322 (13%)
Query: 24 KSLSSDPTEKPTYIR--FL-VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+S+SS+ E P I+ F+ V G +IGKGG TI + +SGA +++ R + +
Sbjct: 108 QSVSSEMGENPDDIKMDFIEVPKEAVGFIIGKGGETIKELSMKSGAYMEVER-RDIDASS 166
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAED--QADDVGTKTKLRLIVPNSSCGSIIG 138
+R+ I G + I A L+++K+ L + VG+ + L +P G IIG
Sbjct: 167 ANRLFRIQGISNHIQLAKQLILEKVAGVLVGQSVCSVTSVGS-IQSELWIPMDRVGVIIG 225
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE----QMRALELILL--KL 192
G TIKS + SQ I + + L ++LVT+ G E +M E+I ++
Sbjct: 226 IGGQTIKSLEEQSQTTIVVH--NEKVNALGEKLVTIVGKPQEVHIAEMLIQEIIQKPSRV 283
Query: 193 SEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNK 252
TLYS M TY G+ + ++ P NK
Sbjct: 284 MNATLYSPVMG-QTTYPGLVSPELSYLSRTSLRP----------------------MTNK 320
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
TI V + IG ++G+ G I ++ SGA I+V + T ER + +SG
Sbjct: 321 -------TIFVPRKSIGMIIGKRGETIRDLQYRSGASIRVVPDNEVSVNTVERPIIVSGS 373
Query: 313 QRSIRTAESMIMQKVAYASDRL 334
S+ A ++I V +RL
Sbjct: 374 LESVELAHNLINDIVNEGIERL 395
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 84/154 (54%), Gaps = 10/154 (6%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV----- 101
G +IGK G TI D Q +SGA I++ +E T +R I++SG+++ + A +L+
Sbjct: 330 GMIIGKRGETIRDLQYRSGASIRVVPDNEVSVNTVERPIIVSGSLESVELAHNLINDIVN 389
Query: 102 --IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
I++L +L +E + LR+ +PN G +IGK+G+TI+ S A I++++
Sbjct: 390 EGIERLGGDL-SESKTLYPSASISLRIQIPNDKVGWLIGKSGSTIRELQQRSGARIQVAK 448
Query: 160 LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+ ++ R VT+TG A +LI KL+
Sbjct: 449 PSET--DIHTRSVTITGPPPFVEIAKQLIAEKLA 480
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 125/314 (39%), Gaps = 84/314 (26%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA---VDLVI 102
G +IG GG TI + QS I + +E ++++ I G E+ A + +I
Sbjct: 220 VGVIIGIGGQTIKSLEEQSQTTIVVH--NEKVNALGEKLVTIVGKPQEVHIAEMLIQEII 277
Query: 103 DKLLTELHAEDQADDVG---------------TKTKLR------LIVPNSSCGSIIGKAG 141
K ++A + +G ++T LR + VP S G IIGK G
Sbjct: 278 QKPSRVMNATLYSPVMGQTTYPGLVSPELSYLSRTSLRPMTNKTIFVPRKSIGMIIGKRG 337
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI-------LLKLSE 194
TI+ S A I++ + +R + ++G+L+ A LI + +L
Sbjct: 338 ETIRDLQYRSGASIRVVPDNEVSVNTVERPIIVSGSLESVELAHNLINDIVNEGIERLGG 397
Query: 195 DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD 254
D S+T+ Y A +
Sbjct: 398 DLSESKTL---YPSASI------------------------------------------- 411
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
SL I + ++ +G+++G+ G I E+ Q SGARI+V+ + + R VTI+GP
Sbjct: 412 ---SLRIQIPNDKVGWLIGKSGSTIRELQQRSGARIQVAKPSE--TDIHTRSVTITGPPP 466
Query: 315 SIRTAESMIMQKVA 328
+ A+ +I +K+A
Sbjct: 467 FVEIAKQLIAEKLA 480
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD---RIIMISGTIDE 93
+R + N G +IGK GSTI + Q +SGARIQ+++ P TD R + I+G
Sbjct: 413 LRIQIPNDKVGWLIGKSGSTIRELQQRSGARIQVAK-----PSETDIHTRSVTITGPPPF 467
Query: 94 ILRAVDLVIDKL 105
+ A L+ +KL
Sbjct: 468 VEIAKQLIAEKL 479
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 38/315 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 252 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 307
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 308 ISSLQDLSIYN-PERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNL 366
Query: 207 TYAGVFFSGFHGMPYGAVPPPV------PAVP-HNTAAHYG------PNMGGRKFQNNKD 253
+ G+F +G +PPP PA P H A H G P+ F ++
Sbjct: 367 SALGIFSTGL-----SVLPPPSGPRGAPPAAPYHPFATHSGYFSSLYPHHQFSPFPHHHS 421
Query: 254 -DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP
Sbjct: 422 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGP 479
Query: 313 QRSIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 480 PEAQFKAQGRIFGKL 494
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 251
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 252 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 282
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 283 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 316
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 317 YNPERTITVKGTVEACANAEIEIMKKLREAFENDML 352
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 428 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 485
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 486 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 542
Query: 157 ISR 159
+ R
Sbjct: 543 VPR 545
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 428 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 485
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 486 AQGRIFGKLKEENFFN 501
>gi|410952456|ref|XP_003982896.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Felis catus]
Length = 580
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 31/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ + T L I
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQAPETETVHLFIPALS-- 417
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 418 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 475
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 419 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 476
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 477 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 532
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 533 NDQVVVKITG 542
>gi|73976022|ref|XP_863341.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 7 [Canis lupus familiaris]
Length = 580
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 128/300 (42%), Gaps = 31/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y Q + +T ++ + +
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP--------QFEQAPQTETVHLFIPALS 417
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 418 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 475
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 419 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 476
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 477 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 532
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 533 NDQVVVKITG 542
>gi|401403726|ref|XP_003881550.1| putative KH domain-containing protein [Neospora caninum Liverpool]
gi|325115963|emb|CBZ51517.1| putative KH domain-containing protein [Neospora caninum Liverpool]
Length = 715
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 22/180 (12%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P Y++ L+SN LAG +IG G I + +GA+I LS +FPGTT+R++ GT
Sbjct: 66 PCYVKMLISNQLAGMIIGNTGQEIKHLKQITGAKIVLSPHGMYFPGTTERLVAAEGTERA 125
Query: 94 ILRAVDLVIDKL--LTELHAEDQ---ADDV----------------GTKTKLRLIVPNSS 132
+ + VD +ID++ L +L Q A+D+ ++ VP +
Sbjct: 126 VFQVVDWIIDRMDELAQLAPPSQPSSAEDLLRPTTSSLSSGSAGLQPRALACKICVPRAV 185
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDHSY-YGLNDRLVTLTGTLDEQMRALELILLK 191
GS+IG+ G I+S ++A I IS L + +R+VT+ T + +R L +
Sbjct: 186 IGSLIGRKGGYIQSVRLATEANINISPLFVTADEACAERVVTVESTRKQSLRTAVFTLAR 245
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
++++ G ++G G+ I + QI+GA+I +S G +F GT+ER V G +R+
Sbjct: 73 ISNQLAGMIIGNTGQEIKHLKQITGAKIVLSPHGMYFPGTTERLVAAEGTERA------- 125
Query: 323 IMQKVAYASDRL 334
+ Q V + DR+
Sbjct: 126 VFQVVDWIIDRM 137
>gi|451855342|gb|EMD68634.1| hypothetical protein COCSADRAFT_350318 [Cochliobolus sativus
ND90Pr]
Length = 488
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 147/372 (39%), Gaps = 86/372 (23%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R + A +IGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 130 HVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVS 186
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L++ + L + E + +RL++P+ GSIIGKAG I+ + S A
Sbjct: 187 KAFGLIV-RTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNA-- 243
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTY 208
K++ D +R + + G D A+ + L E SQ T
Sbjct: 244 KLNASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 303
Query: 209 AGVFFSGFHGMPYGAVPPPV--------------PAVPHNTAAHYG---PNMGGRKFQNN 251
A V G PY VP P PA T AH G P+M G+ Q +
Sbjct: 304 ANVVPGGMSVQPY--VPQPAGGQYSHPQNFRRQEPA--QRTPAHGGYGAPHMHGQPPQQS 359
Query: 252 KDDRTN-------------------------------------------------SLTIG 262
N + I
Sbjct: 360 PYGHPNMPYGAASPSRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGAIPGQPLTQQIF 419
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
+ ++ +G ++G+GG I EI Q+SG+ IK+++ D ++ER VTI+G Q + A M
Sbjct: 420 IPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTD---NSNERLVTITGTQECNQMALYM 476
Query: 323 IMQKVAYASDRL 334
+ ++ R+
Sbjct: 477 LYSRLESEKHRI 488
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ P + + + N + GA+IGKGG+ IN+ + SG+ I++ +E +
Sbjct: 404 APVGAIPGQPLTQ----QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNS 456
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+R++ I+GT + A+ ++ +L +E H
Sbjct: 457 NERLVTITGTQECNQMALYMLYSRLESEKH 486
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 245 GRKFQNNKD-DRTNSLTI--GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
GR +N+ D TN L + + ++G+GG N+ +I ++SGA+ VS D+ G
Sbjct: 114 GRPVNSNQQVDETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRG 170
Query: 302 TSERKVTISGPQRSIRTAESMIMQ 325
ER +T+SG ++ A +I++
Sbjct: 171 AVERILTVSGQVDAVSKAFGLIVR 194
>gi|449551271|gb|EMD42235.1| hypothetical protein CERSUDRAFT_110766 [Ceriporiopsis subvermispora
B]
Length = 324
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 139/304 (45%), Gaps = 33/304 (10%)
Query: 17 KRSTAPVKSLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+ S +P S S P +R LVS AG +IGK G + D + +G + +S+
Sbjct: 9 RESGSPAHSRSPSPVGNEVLTLRALVSTKDAGVIIGKAGKNVADLRDHTGVKAGVSK--- 65
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV-GTKTKLRLIVPNSSCG 134
PG +R++ +SG+++ + +A L++ +L+ + + V +T +RL++ ++ G
Sbjct: 66 VIPGVHERVLTVSGSVEGVAKAYALIVSQLVAANPSSPVSPTVPSQQTAIRLLISHNLMG 125
Query: 135 SIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
S+IG+ G IK+ D S A + S+ L S +R+V + G D RA+E I L
Sbjct: 126 SVIGRNGLKIKAIQDASGARMVASKDMLPQS----TERIVEVQGASDSIGRAIEEIGRCL 181
Query: 193 SEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGR---KFQ 249
ED + + +G S G N+ ++ GR
Sbjct: 182 LEDWERGLGTVLFHPGSGEDRSRRSG---------------NSGRRTNGDVRGRTSPSPH 226
Query: 250 NNKDDRTNSLT--IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKV 307
+ TN T I + + +G ++GR G I EI ++SG++I ++ + T ER
Sbjct: 227 SPSSQPTNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAK--EPHDETGERMF 284
Query: 308 TISG 311
TI G
Sbjct: 285 TIVG 288
>gi|170084019|ref|XP_001873233.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650785|gb|EDR15025.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 318
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGK G + D + Q+G + +S+ PG +R++ ++G ++ + +
Sbjct: 3 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSK---VIPGVHERVLTVTGPVEAVAK 59
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK---TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
A L+I +L+ + T +RL++ ++ G+IIG++G IK+ D S A
Sbjct: 60 AYTLIISQLVISNPSSPVTPSSSPSSLHTSIRLLISHNLMGTIIGRSGLKIKAIQDGSGA 119
Query: 154 VIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGV 211
+ S+ L S +R+V + G+ + RA+E I L ED + G
Sbjct: 120 RMVASKEMLPQS----TERVVEVQGSPEAIGRAVEEIGKCLLEDWERGLGTVLFNPGTGD 175
Query: 212 FFSGFH--------------------GMPYGAVPPP-VPAVPHNTAAHYGPNMGGRKFQN 250
SG + P PPP P P + A+ Q
Sbjct: 176 DRSGGNRRGGHGYSGSYSGSRRSNGDAAPRARTPPPGSPTQPQSPASS----------QT 225
Query: 251 NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
+ RT +++I + +G ++GR G I EI ++SG++I ++ T ER TI
Sbjct: 226 AANLRTQNISI--PSDMVGCIIGRSGTKITEIRRLSGSKISIAK--TPHDDTGERMFTIV 281
Query: 311 G 311
G
Sbjct: 282 G 282
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T IR L+S+ L G +IG+ G I Q SGAR+ S+ E P +T+R++ + G+ + I
Sbjct: 88 TSIRLLISHNLMGTIIGRSGLKIKAIQDGSGARMVASK--EMLPQSTERVVEVQGSPEAI 145
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGT 120
RAV+ + LL ED +GT
Sbjct: 146 GRAVEEIGKCLL-----EDWERGLGT 166
>gi|302498875|ref|XP_003011434.1| hypothetical protein ARB_02284 [Arthroderma benhamiae CBS 112371]
gi|291174985|gb|EFE30794.1| hypothetical protein ARB_02284 [Arthroderma benhamiae CBS 112371]
Length = 561
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 144/341 (42%), Gaps = 59/341 (17%)
Query: 7 SYVPSPDVH----GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+Y P + H G RS P S T + N G +IG+ G + ++
Sbjct: 161 AYSPPSNRHYRAGGDRSPPPRNRGSGSDENNET---IEIDNKHVGLIIGRQGENLRRIEN 217
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH-AEDQADDVGTK 121
++GAR+Q S E T R+ +SG I ID++++E + A + +G
Sbjct: 218 ETGARVQFLDSAEH--NKTIRLCRLSGP-KSIRDKAKAEIDRIVSENNQARNDGRPIGQD 274
Query: 122 TK---------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ +++VP+ + G +IG++G T++ + S I I+R S GL R V
Sbjct: 275 GRPIDADGSETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPV 332
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
TLTG+ RA ELIL + DT SG G P
Sbjct: 333 TLTGSQQAIQRAKELILGIVESDTR---------------TSGNQGQ----------REP 367
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ GG K N+K + + E++G V+G+GG I E+ +SG +I +
Sbjct: 368 RGQGSGGENGGGGEKL-NDK--------MFIPKEYVGMVIGKGGETIRELQTLSGCKINI 418
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
+ ER+VT G Q +I A+ ++ KV A +R
Sbjct: 419 L---PLVAREPEREVTFYGVQTAIDAAKKAVLAKVEAAKNR 456
>gi|167535308|ref|XP_001749328.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772194|gb|EDQ85849.1| predicted protein [Monosiga brevicollis MX1]
Length = 689
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 114/273 (41%), Gaps = 57/273 (20%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
+DP +V AG +IG+GG TIN Q++SGAR+++ + P +R++ +
Sbjct: 202 ADPNANAETETMMVPAERAGFLIGRGGETINMIQTRSGARLKMVQED---PHAAERLLYM 258
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQA-------DDVGTKTKLRLIVPNSSCGSIIGKA 140
G + I RA +LV D L + A +A D+ +L++ VP + G +IG+
Sbjct: 259 MGDAEAIKRARELVADLLAEKPSAPQEAPPMPTSYDENNRHLRLKIEVPGVAAGRVIGRG 318
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLND-RLVTLTGTLDEQMRALELILLKLSEDTLYS 199
G TI+ D+ I+ + D G ND R+ TLTG D + A E ++ + D
Sbjct: 319 GETIRRIEADTGCRIQFDQADGVGLGPNDARIATLTGNQD-AIEAAEQAIVGIIRDAERP 377
Query: 200 QTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSL 259
A PP + + D +
Sbjct: 378 D----------------------AGPP-----------------------SRRADSRPTD 392
Query: 260 TIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
TI + E GF++G+GG I I +G +++
Sbjct: 393 TIAIPAERAGFIIGKGGETIRSIQDQTGVHLEL 425
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 125/322 (38%), Gaps = 85/322 (26%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V G +IG+GG TIN Q+QSG+RIQ+++ G R ++G D + R
Sbjct: 98 VEMTVPGAHVGRIIGRGGETINRLQNQSGSRIQVAQDL----GQPMRPCTLTGVPDSVQR 153
Query: 97 AVDLVIDKLLTELHAE--------------------------------DQADDVGTKTKL 124
A ++I++++ E H + D AD
Sbjct: 154 A-KVLIEEIVRE-HMQPFGPGAGGPGGNASGPTTASLMASAYGTAPDGDGADPNANAETE 211
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD-HSYYGLNDRLVTLTGTLDEQMR 183
++VP G +IG+ G TI S A +K+ + D H+ +RL+ + G + R
Sbjct: 212 TMMVPAERAGFLIGRGGETINMIQTRSGARLKMVQEDPHAA----ERLLYMMGDAEAIKR 267
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A EL+ L+E P+ P P M
Sbjct: 268 ARELVADLLAEK---------------------------------PSAPQEA-----PPM 289
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+NN+ R GVA G V+GRGG I I +G RI+ G +
Sbjct: 290 PTSYDENNRHLRLKIEVPGVA---AGRVIGRGGETIRRIEADTGCRIQFDQADGVGLGPN 346
Query: 304 ERKV-TISGPQRSIRTAESMIM 324
+ ++ T++G Q +I AE I+
Sbjct: 347 DARIATLTGNQDAIEAAEQAIV 368
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP S D + ++ V AG VIG+GG TI ++ +G RIQ ++ G
Sbjct: 286 APPMPTSYDENNRHLRLKIEVPGVAAGRVIGRGGETIRRIEADTGCRIQFDQADGVGLGP 345
Query: 81 TD-RIIMISGTIDEILRAVDLVIDKLLTELHAED------QADDVGTKTKLRLIVPNSSC 133
D RI ++G D I A + I ++ + D +AD T T + +P
Sbjct: 346 NDARIATLTGNQDAI-EAAEQAIVGIIRDAERPDAGPPSRRADSRPTDT---IAIPAERA 401
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
G IIGK G TI+S D + ++ LD + N+++ + G D+
Sbjct: 402 GFIIGKGGETIRSIQDQTGVHLE---LDRNSEAGNEKIFIIRGNPDQ 445
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 81/212 (38%), Gaps = 25/212 (11%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D + + + VP + G IIG+ G TI + S + I++++ G R TLTG
Sbjct: 91 DASSIVTVEMTVPGAHVGRIIGRGGETINRLQNQSGSRIQVAQ----DLGQPMRPCTLTG 146
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTA 236
D RA LI + E + M A
Sbjct: 147 VPDSVQRAKVLIEEIVREHMQPFGPGAGGPGGNASGPTTASLM----------------A 190
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
+ YG G N + T ++ V E GF++GRGG I I SGAR+K+
Sbjct: 191 SAYGTAPDGDGADPNANAETETMM--VPAERAGFLIGRGGETINMIQTRSGARLKMVQED 248
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
+ER + + G +I+ A ++ +A
Sbjct: 249 PH---AAERLLYMMGDAEAIKRARELVADLLA 277
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 15/164 (9%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G T+ + +SGARI +S + +RI+ I+G D I +A ++ K
Sbjct: 56 GSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFKAFAMIAYKFE 110
Query: 107 TELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDH 162
++ +K LRL+VP S CGS+IGK G+ IK + + A ++++ L +
Sbjct: 111 EDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 170
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 171 S----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 208
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 77/178 (43%), Gaps = 53/178 (29%)
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
GSIIGK G T+K ++S A I IS + +R+VT+TG D +A +I K
Sbjct: 56 GSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFKAFAMIAYKFE 110
Query: 194 EDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD 253
ED + S + + P T PPV
Sbjct: 111 EDIINSMSNS-PATSK----------------PPV------------------------- 128
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
+L + V G ++G+GG I EI + +GA+++V+ GD ++ER VTISG
Sbjct: 129 ----TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA--GDMLPNSTERAVTISG 180
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 114 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 171
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 172 TERAVTISGTPDAIIQCVKQICVVML 197
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 108
>gi|296081618|emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGKGG TI Q QSGA+IQ++R + P + R++ + GT D+I
Sbjct: 136 TSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQI 195
Query: 95 LRAVDLVIDKLLTELHAEDQA-------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+A L+ D +L+E A G++ + + VPN+ G IIGK G TIK+
Sbjct: 196 AKAEQLIND-VLSEAEAGGSGIVSRRLTGQAGSE-QFVMKVPNNKVGLIIGKGGETIKNM 253
Query: 148 MDDSQAVIKISRLDHSYYGLN--DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+ A I++ L H G +R V + GT ++ A +L+ +SE+ + + M
Sbjct: 254 QARTGARIQVIPL-HLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGG 312
Query: 206 YT---YAGVFFSGFHGMPYGAVP 225
Y Y SG+ G P GA P
Sbjct: 313 YPQQGYQARPPSGW-GAPPGAPP 334
>gi|325093144|gb|EGC46454.1| KH domain RNA binding protein [Ajellomyces capsulatus H88]
Length = 499
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 151/363 (41%), Gaps = 83/363 (22%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A IGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGMQDAVA 194
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK+G I+ + S A
Sbjct: 195 KAFGLIIRTLNNEPLEAPSTAQ---SKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGA 251
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED----------TLYS---- 199
+ S D +R + + G D A + + L E + Y+
Sbjct: 252 RLNAS--DSCLPLSTERTLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSG 309
Query: 200 --------QTMTVPYT--YAG------------------VFFSGFHGMPYGAVPPPVPAV 231
VPY AG V +G +G+PY P P +
Sbjct: 310 GAAGVVPGGMQVVPYVPQPAGGQYGHPDTFKRHQPPGNRVVSTGGYGVPYVHGQPGQPQM 369
Query: 232 PHNTAAHYG------------------------PNMGGRKFQNNK---DDRTNSLTIGVA 264
PH A HYG P GG Q + I +
Sbjct: 370 PHQ-ALHYGSSSRPGYSGAGPHQPAPYGAPQPAPVHGGPSAQPAGGVVPGAPVTQQIFIP 428
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
++ +G ++G+GG I EI +SG+ IK+++ D ++ER VTI+G + A M+
Sbjct: 429 NDMVGAIIGKGGAKINEIRHLSGSVIKINEPQD---NSNERLVTITGTPECNQMALYMLY 485
Query: 325 QKV 327
++
Sbjct: 486 SRL 488
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 201 IRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS-- 258
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 259 CLPLSTERTLVILGVADAVHIATYYVAVTLVEQL 292
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 418 GAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGT 473
Query: 178 LDEQMRALELILLKLSEDTLYSQT 201
+ AL ++ +L L + T
Sbjct: 474 PECNQMALYMLYSRLGTFNLLTPT 497
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P+P VHG S P + P + + N + GA+IGKGG+ IN+ + SG+ I+
Sbjct: 400 PAP-VHGGPSAQPAGGVVPG---APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIK 455
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT 107
++ + + +R++ I+GT + A+ ++ +L T
Sbjct: 456 INEPQD---NSNERLVTITGTPECNQMALYMLYSRLGT 490
>gi|340959534|gb|EGS20715.1| hypothetical protein CTHT_0025510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 373
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 138/297 (46%), Gaps = 26/297 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS+ AG +IGKGG + + + ++G + +S+ G DR++ I+G D + R
Sbjct: 53 LRALVSSKEAGVIIGKGGQNVANLREETGVKAGVSK---VVQGVYDRVLTITGGCDAVSR 109
Query: 97 AVDLVIDKLLTELHAEDQADDV---GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A +V LL A V GT ++L++ ++ G+IIG+ G IK D S
Sbjct: 110 AYAVVARALLEGAPAVSMGGVVQHNGTH-PIKLLISHNQMGTIIGRQGQRIKYIQDVSGV 168
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA-G 210
+ V + L S +R+V + GT + RA+ I L +D T TV Y A
Sbjct: 169 RMVAQKEMLPQS----TERIVEVQGTPEGIQRAVWEICKCLVDD-WQRGTGTVFYNPAVR 223
Query: 211 VFFSGFHGMPYGA--VPPPVPAVPHNTAAHYG---PNMGGRKFQNNKDDRTNSL---TIG 262
GFH YG+ + A N + YG + GG + D+ + I
Sbjct: 224 TQVGGFHDR-YGSRVLRTGNGADFSNGSRSYGRRSDSEGGPRGPPTHDENGEEIQTQNIS 282
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTA 319
+ + +G ++GRGG I EI + SGARI ++ T ER TI G ++ TA
Sbjct: 283 IPADMVGCIIGRGGSKISEIRKTSGARISIAK--APHDETGERMFTIMGTAKANETA 337
>gi|395540426|ref|XP_003772156.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like [Sarcophilus harrisii]
Length = 587
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 136/301 (45%), Gaps = 30/301 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G +++ I I + +
Sbjct: 200 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GASEKPITIHASPEGCST 257
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E D++ L+++ N+ G +IGK G +K D+ I
Sbjct: 258 ACKIIMEIMQKEAQDTKFTDEI----PLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 313
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YT 207
IS L +R +T+ G+++ +A E I+ K+ E + Q +P
Sbjct: 314 ISPLQELTLYNPERTITVKGSIETCGKAEEEIMKKIRESYESDLSAMNLQAHLLPGLNLN 373
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAA-HYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
G+F + G+P P VP AA +Y P + T ++ + +
Sbjct: 374 ALGLFPASTSGIPS----PSTLGVPSAAAATNYLP--------YGQQAETETVHLFIPAM 421
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+G ++G+ G++I ++S+ +GA IK++ ER V I+GP + A+ I K
Sbjct: 422 AVGAIIGKMGQHIKQLSRFAGASIKIAPPET--PDAKERMVIITGPPEAQFKAQGRIYGK 479
Query: 327 V 327
+
Sbjct: 480 L 480
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 62/214 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK GATI++ +Q+ I I R +++ G +++ +T+ + +
Sbjct: 200 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GASEKPITIHASPEGCST 257
Query: 184 ALELIL---LKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
A ++I+ K ++DT ++ + P+ + HN
Sbjct: 258 ACKIIMEIMQKEAQDTKFTDEI------------------------PLKILAHNN----- 288
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I Q + +I +S +
Sbjct: 289 --------------------------FVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL 322
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+K+ +Y SD
Sbjct: 323 YNPERTITVKGSIETCGKAEEEIMKKIRESYESD 356
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 6 SSYVPSPDVHGKRSTAPVKS-LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQS 64
+S +PSP G S A + L + + + GA+IGK G I +
Sbjct: 382 TSGIPSPSTLGVPSAAAATNYLPYGQQAETETVHLFIPAMAVGAIIGKMGQHIKQLSRFA 441
Query: 65 GARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKL 124
GA I+++ P +R+++I+G + +A + KL E + G K ++
Sbjct: 442 GASIKIAPPET--PDAKERMVIITGPPEAQFKAQGRIYGKLKEE-------NFFGPKEEV 492
Query: 125 RL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+L VP+ + G +IGK G T+ + + A + + R
Sbjct: 493 KLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 531
>gi|328851244|gb|EGG00400.1| hypothetical protein MELLADRAFT_39696 [Melampsora larici-populina
98AG31]
Length = 420
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 16/164 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGKGG IN+ + +SGAR +S E PG +RI+ + G +D + +
Sbjct: 92 MRALIVTQDASIIIGKGGRHINEIREKSGARATIS---EAVPGNAERILSVGGPLDAVSK 148
Query: 97 AVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
A L++ ++ D+ DV G++ +R +VPNS GS+IGKAG+ IK D S
Sbjct: 149 AFGLIVRRI------NDEPFDVPSVPGSRAVTIRFVVPNSRMGSVIGKAGSKIKEIQDMS 202
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
A ++ S + G +R+++++G D A+ + + L E+
Sbjct: 203 GARVQAS--EAMLPGSTERVLSVSGVADAVHIAVYYVGMILVEN 244
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P + IRF+V N G+VIGK GS I + Q SGAR+Q S + PG+T+R++
Sbjct: 164 VPSVPGSRAVTIRFVVPNSRMGSVIGKAGSKIKEIQDMSGARVQASEA--MLPGSTERVL 221
Query: 86 MISGTIDEILRAVDLV 101
+SG D + AV V
Sbjct: 222 SVSGVADAVHIAVYYV 237
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 54/212 (25%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++R ++ IIGK G I + S A IS + G +R++++ G LD
Sbjct: 91 QMRALIVTQDASIIIGKGGRHINEIREKSGARATISE---AVPGNAERILSVGGPLDAVS 147
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
+A LI+ +++++ P VP+VP
Sbjct: 148 KAFGLIVRRINDE-----------------------------PFDVPSVP---------- 168
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
R ++ V + +G V+G+ G I EI +SGAR++ S+ G+
Sbjct: 169 ----------GSRAVTIRFVVPNSRMGSVIGKAGSKIKEIQDMSGARVQASEA--MLPGS 216
Query: 303 SERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
+ER +++SG ++ A + + DR+
Sbjct: 217 TERVLSVSGVADAVHIAVYYVGMILVENQDRM 248
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD--FFSGTSERKVTISGPQRSIRT 318
I + +E +G V+G+GG+ I EI Q S IK+ + G+ + T+ER VTI+G I+
Sbjct: 345 IYIPNELVGAVIGKGGQKINEIRQASATHIKIMEPGEGGQAASTNERLVTITGQPLQIQM 404
Query: 319 AESMIMQKV 327
A ++ Q++
Sbjct: 405 AVQLLYQRL 413
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE--FFPGTTDRIIMISGTIDEIL 95
+ + N L GAVIGKGG IN+ + S I++ E T +R++ I+G +I
Sbjct: 344 QIYIPNELVGAVIGKGGQKINEIRQASATHIKIMEPGEGGQAASTNERLVTITGQPLQIQ 403
Query: 96 RAVDLVIDKLLTE 108
AV L+ +L E
Sbjct: 404 MAVQLLYQRLEAE 416
>gi|393218460|gb|EJD03948.1| hypothetical protein FOMMEDRAFT_140050 [Fomitiporia mediterranea
MF3/22]
Length = 347
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 136/316 (43%), Gaps = 63/316 (19%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P ++ +R LVS AG +IGKGG + D + ++G + +S+ PG +R++ +SG
Sbjct: 32 PIKETLTLRALVSTKDAGVIIGKGGKNVADLRDETGVKAGVSK---VVPGVHERVLTVSG 88
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
++++ +A L+I +L+ + T +RL++ ++ G+IIG+ G IK+ D
Sbjct: 89 DVEKVAKAYRLIIAQLIDASPPSPTTTSPPSNTSIRLLISHNLMGTIIGRGGLKIKAIQD 148
Query: 150 DSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
S A + S+ L S +R+V + G+ D A+E I L ED Q +
Sbjct: 149 ASGARMVASKDMLPQS----TERIVEVQGSADAIGLAIEQIGKCLLEDWERGQGTVL--- 201
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN---------- 257
FH P P+ + F +++ RTN
Sbjct: 202 --------FH---------PGPSSDASAGRRSANGYSSASFTSSR--RTNGDRARGGSPP 242
Query: 258 -------------------SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
+ I + + +G ++GRGG I EI ++SG++I ++
Sbjct: 243 PTPPQSLPPSSPQQSANLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAK--TP 300
Query: 299 FSGTSERKVTISG-PQ 313
T ER TI G PQ
Sbjct: 301 HDETGERMFTIVGTPQ 316
>gi|326935820|ref|XP_003213964.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Meleagris
gallopavo]
Length = 232
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ D + R
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTDAVFR 75
Query: 97 AVDLVIDKLLTELHAEDQADDVG---TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
AV ++ KL ED D T LRL++P S CGS+IGKAG I+ + S A
Sbjct: 76 AVSMIAFKL-----EEDLGDGTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRESSGA 130
Query: 154 VIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----T 207
++++ L +S +R VT++G D ++ + I + E + T+PY +
Sbjct: 131 QVQVAGDLLPNS----TERAVTVSGVPDTIIQCVRQICAVILESP--PKGATIPYHPGLS 184
Query: 208 YAGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGG 245
+ S G Y V P ++ + +G N GG
Sbjct: 185 LGTILLSANQGFSMQGQYSGVSPAEVSLYQPCSLVHGANPGG 226
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 77/188 (40%), Gaps = 57/188 (30%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+ D R
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE-----GSCPERITTITGSTDAVFR 75
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A+ +I KL ED + TAA P
Sbjct: 76 AVSMIAFKLEED-----------------------------------LGDGTAAGRTPV- 99
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + + G ++G+ G I EI + SGA+++V+ GD ++
Sbjct: 100 --------------TLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQVA--GDLLPNST 143
Query: 304 ERKVTISG 311
ER VT+SG
Sbjct: 144 ERAVTVSG 151
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + SGA++Q+ + + P +T+R + +SG D
Sbjct: 98 PVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQV--AGDLLPNSTERAVTVSGVPDT 155
Query: 94 ILRAVDLVIDKLL 106
I++ V + +L
Sbjct: 156 IIQCVRQICAVIL 168
>gi|322698395|gb|EFY90165.1| KH domain RNA-binding protein [Metarhizium acridum CQMa 102]
Length = 367
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 135/315 (42%), Gaps = 50/315 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G D I R
Sbjct: 49 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGECDAISR 105
Query: 97 AVDLVIDKLLTELHAEDQADDV---GT---KTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
A +V LL A V GT T ++L++ ++ G+IIG+ G IK D
Sbjct: 106 AYAIVARALLEGAPAMGMGGIVQSNGTHLSSTAIKLLISHNQMGTIIGRQGLKIKHIQDV 165
Query: 151 S--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY-- 206
S + V + L S +R+V + GT D RA+ I L +D T TV Y
Sbjct: 166 SGVRMVAQKEMLPQS----TERIVEVQGTPDGIQRAVWEICKCLVDD-WQRGTGTVLYNP 220
Query: 207 ---TYAGVFFSGFHGMPY----GAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD------ 253
T AG SG G Y G P V N G R F D
Sbjct: 221 VVRTQAG---SGGLGSNYNNGGGRSDYGSPRVMRTGNGADFSNGGVRPFSRRSDSDAASR 277
Query: 254 ---------DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE 304
+ + I + + +G ++GR G I EI + SGARI ++ T E
Sbjct: 278 GPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAK-------TGE 330
Query: 305 RKVTISGPQRSIRTA 319
R TI G ++ +A
Sbjct: 331 RMFTIMGTAKANESA 345
>gi|330914909|ref|XP_003296833.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
gi|311330863|gb|EFQ95085.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 144/364 (39%), Gaps = 83/364 (22%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R + A +IGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 131 HVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVS 187
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L++ + L + E + +RL++P+ GSIIGKAG I+ + S A
Sbjct: 188 KAFGLIV-RTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQEASNA-- 244
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTY 208
K++ D +R + + G D A+ + L E SQ T
Sbjct: 245 KLNASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 304
Query: 209 AGVFFSGFHGMPYGAVPPPV------------PAVPHNTAAHYG---PNMGGRKFQNNKD 253
A V G PY VP P P T AH G P+M G+ Q +
Sbjct: 305 ANVVPGGMSVQPY--VPQPAGGQYSHPQNFRRQEPPQRTPAHGGYGAPHMHGQPPQQSPY 362
Query: 254 DRTN--------------------------------------------------SLTIGV 263
N + I +
Sbjct: 363 GHPNMPYGAGSPSRGPYGGPAAPTPYGAHPAAAPVAHGGAAPHAAVGAMPGQPLTQQIFI 422
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ +G ++G+GG I EI Q+SG+ IK+++ D ++ER VTI+G Q + A M+
Sbjct: 423 PNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTD---NSNERLVTITGTQECNQMALYML 479
Query: 324 MQKV 327
++
Sbjct: 480 YSRL 483
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 413 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNS----NERLVTITGT 468
Query: 178 LDEQMRALELILLKLSE 194
+ AL ++ +L +
Sbjct: 469 QECNQMALYMLYSRLGQ 485
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 245 GRKFQNNKD-DRTNSLTI--GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
GR +N+ D TN L + + ++G+GG N+ +I ++SGA+ VS D+ G
Sbjct: 115 GRPVNHNQQVDETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRG 171
Query: 302 TSERKVTISGPQRSIRTAESMIMQKV 327
ER +T+SG ++ A +I++ +
Sbjct: 172 AVERILTVSGQVDAVSKAFGLIVRTL 197
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T K +R L+ + L G++IGK G I + Q S A+ L+ S P + +R +++ G
Sbjct: 209 TSKAYPMRLLIPHILIGSIIGKAGIRIREIQEASNAK--LNASDTLLPNSGERSLIVLGV 266
Query: 91 IDEILRAVDLVIDKLLTEL 109
D + AV V L+ +L
Sbjct: 267 ADAVHIAVYYVAQTLVEQL 285
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I++ +E + +R++ I+GT +
Sbjct: 414 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNSNERLVTITGTQE 470
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 471 CNQMALYMLYSRL 483
>gi|348564372|ref|XP_003467979.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cavia porcellus]
Length = 741
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 35/319 (10%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 344 RQGSPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 400
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 401 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 455
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-- 195
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 456 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYE 515
Query: 196 ----TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
++ Q +P G+F P +PPP GP +
Sbjct: 516 NDIASMNLQAHLIPGLNLNALGLF------PPTSGMPPPT----------SGPPSAMPPY 559
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ T ++ + + +G ++G+ G++I ++S+ +GA IK++ R V
Sbjct: 560 PQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAP--AEAPDAKVRMVI 617
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+GP + A+ I K+
Sbjct: 618 ITGPPEAQFKAQGRIYGKI 636
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 580 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 637
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 638 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 693
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 694 NDQVVVKITG 703
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 125/272 (45%), Gaps = 48/272 (17%)
Query: 23 VKSLSSDPTEKPTYI------RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
+KS + P P+Y + + N G +IGKGG TI Q QSGA+IQ++R +
Sbjct: 94 LKSQYAAPMSIPSYSHQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDA 153
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK----------LRL 126
P + +R++ ++GT D I A +KL+ E+ AE ++ G T+ +
Sbjct: 154 DPNSPNRLVELTGTSDAIATA-----EKLIKEVLAEAESGGNGLVTRRMTGQGGADEFSM 208
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQ 181
+PN+ G IIGK G TIKS + A I++ L D S +R + + GT ++
Sbjct: 209 KIPNNKVGLIIGKGGETIKSMQATTGARIQVIPLHLPPGDTS----TERTLKIEGTSEQI 264
Query: 182 MRALELILLKLS-EDTLYSQTMT-----------VPYTYAGVFFSGFHGMPY---GAVPP 226
A +L+ LS E+ L + +M+ P ++A S G Y GA P
Sbjct: 265 ESAKQLVDSILSGENRLRNPSMSGGYSQQGYQARPPSSWAPPAASQQPGYGYAQPGAYPG 324
Query: 227 PVPA--VPHNTAAHYGPNMGGRKFQNNKDDRT 256
P P VP A Y P+ G + N D T
Sbjct: 325 PTPQYNVPQQAYAGYPPHSAG-GYSTNWDQST 355
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S I + + +G ++G+GG I + SGA+I+V+ D + R V ++G +I
Sbjct: 112 SSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAI 171
Query: 317 RTAESMIMQKVAYA 330
TAE +I + +A A
Sbjct: 172 ATAEKLIKEVLAEA 185
>gi|115927400|ref|XP_782196.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 144/319 (45%), Gaps = 41/319 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + GA+IGKGG+ I ++G ++ + R G++++ + I G ++
Sbjct: 203 VRILVRSEFVGAIIGKGGNNIRAITKETGCKVDIHRKDNI--GSSEKAVTICGEPQQVTE 260
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+ +++ ++ E E D L+++ N+ G +IGK+G++I S M+DS+A +
Sbjct: 261 TIKKIVEVMIKESSEESHTD-----MPLKVLAHNALVGRLIGKSGSSINSIMEDSKAKVT 315
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-TLYSQTMTVPYTYAGVFFSG 215
+S + +R VT+ GT ++ + A LI KL + Y Q + P + F G
Sbjct: 316 VSLIQDLTVFNPERTVTIYGTPEQCIAAEALISKKLRKAYESYIQNLQ-PQQHD--LFPG 372
Query: 216 FHGMPY--GAVPPP-------------------------VPAVPHNTAAHYGPNMGGRKF 248
+ M G + P P P H GP GG
Sbjct: 373 LNHMSLMSGGMHHPGQQGPPGPHYGGHGGPGGPFDGGPHYPNQPPMNMPHGGPQQGGGGG 432
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
N++ + + + V E +G ++G GG+NI ++ S A I+++ G+ ++ER V
Sbjct: 433 GMNQEP-SETTYLFVPREAVGALIGVGGKNIRNTARASNATIRIAPAGN--EDSNERCVK 489
Query: 309 ISGPQRSIRTAESMIMQKV 327
I G S A+ I ++
Sbjct: 490 IIGTPESQWRAQFYIYDRI 508
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
N GP + QN D + I V E +G ++G+GG NI I++ +G ++ +
Sbjct: 178 NNRNQGGPGGMYHQQQNVPDTSNFPVRILVRSEFVGAIIGKGGNNIRAITKETGCKVDIH 237
Query: 294 DRGDFFSGTSERKVTISG-PQRSIRTAESMIMQKVAYASD 332
+ + G+SE+ VTI G PQ+ T + ++ + +S+
Sbjct: 238 RKDNI--GSSEKAVTICGEPQQVTETIKKIVEVMIKESSE 275
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS+ + ++ L N L G +IGK GS+IN S A++ +S + +R +
Sbjct: 273 SSEESHTDMPLKVLAHNALVGRLIGKSGSSINSIMEDSKAKVTVSLIQDLTVFNPERTVT 332
Query: 87 ISGTIDEILRAVDLVIDKL 105
I GT ++ + A L+ KL
Sbjct: 333 IYGTPEQCIAAEALISKKL 351
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
++ +P+E TY+ V GA+IG GG I + S A I+++ + + +R +
Sbjct: 434 MNQEPSET-TYL--FVPREAVGALIGVGGKNIRNTARASNATIRIAPAGN--EDSNERCV 488
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-KTKLR--LIVPNSSCGSIIGKAGA 142
I GT + RA + D++ +E +G+ + LR + VP+ G IIGK G
Sbjct: 489 KIIGTPESQWRAQFYIYDRIRSE-------GILGSGEVHLRSEIAVPSQLVGRIIGKRGQ 541
Query: 143 TIKSFMDDSQAVIKISR 159
++ + A +++ R
Sbjct: 542 RVRELQRVTGARVEVPR 558
>gi|336265613|ref|XP_003347577.1| hypothetical protein SMAC_04885 [Sordaria macrospora k-hell]
gi|380096444|emb|CCC06492.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 469
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 15 HGKRSTA--PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
HG RS A PV + D T ++R ++S+P A +IGKGG ++ + S A+ +S
Sbjct: 104 HGPRSRAQPPVSAQPHDETAW-IHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVS- 161
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNS 131
++ G +RI+ +SG +D + +A L+I L E AE + +KT LRL++P+
Sbjct: 162 --DYQKGAVERILTVSGVVDAVAKAFGLIIRTLNNEPLAE--PSNTHSKTYPLRLLIPHV 217
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKIS 158
GSIIGK GA IK + S A + S
Sbjct: 218 LIGSIIGKGGARIKEIQEASGARLNAS 244
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 189 IRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDS-- 246
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 247 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 281
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 232 PHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIK 291
PH H P G Q I + ++ +G ++G+GG+ I EI QISG+ IK
Sbjct: 372 PHPAGPHGAPVAGAALTQQ----------IYIPNDMVGAIIGKGGQKINEIRQISGSVIK 421
Query: 292 VSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
+++ D ++ER VTI+G + R A ++ Q++ + D
Sbjct: 422 INEPQD---NSNERLVTITGTEECNRMALYLLYQRLGELQNNARD 463
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTG 176
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TG
Sbjct: 383 AGAALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITG 438
Query: 177 TLDEQMRALELILLKLSE 194
T + AL L+ +L E
Sbjct: 439 TEECNRMALYLLYQRLGE 456
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 72/198 (36%), Gaps = 54/198 (27%)
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
Q D +R ++ + +IIGK G + + S A +S G +R++T
Sbjct: 117 QPHDETAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQ---KGAVERILT 173
Query: 174 LTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPH 233
++G +D +A LI+ L+ + L + T TY +PH
Sbjct: 174 VSGVVDAVAKAFGLIIRTLNNEPLAEPSNTHSKTYPLRLL-----------------IPH 216
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
IG ++G+GG I EI + SGAR+ S
Sbjct: 217 VL--------------------------------IGSIIGKGGARIKEIQEASGARLNAS 244
Query: 294 DRGDFFSGTSERKVTISG 311
D ++ER + + G
Sbjct: 245 D--SCLPLSTERSLVVMG 260
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +E R
Sbjct: 390 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGT-EECNRM 445
Query: 98 VDLVIDKLLTELH 110
++ + L EL
Sbjct: 446 ALYLLYQRLGELQ 458
>gi|296209450|ref|XP_002751548.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Callithrix jacchus]
Length = 579
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 416
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 474
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ ++ I + + E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 186
Query: 209 AGVFFSG 215
V FSG
Sbjct: 187 TPVIFSG 193
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 53/193 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G T+K ++S A I IS + +R+VT+TG D +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 72
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K ED + S + + P T PPV
Sbjct: 73 AFAMIAYKFEEDIINSMSNS-PATSK----------------PPV--------------- 100
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I E+ + +GA+++V+ GD ++
Sbjct: 101 --------------TLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVA--GDMLPNST 144
Query: 304 ERKVTISGPQRSI 316
ER VTISG +I
Sbjct: 145 ERAVTISGTPEAI 157
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 86 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNS 143
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT + I++ V + +L
Sbjct: 144 TERAVTISGTPEAIIQCVKQICVVML 169
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G + ++ + SGARI +S+ ER VTI+GP +I A +MI
Sbjct: 25 KEVGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAY 79
Query: 326 K 326
K
Sbjct: 80 K 80
>gi|2105469|gb|AAC35208.1| putative RNA binding protein KOC [Homo sapiens]
gi|4098297|gb|AAD09223.1| Koc1 [Homo sapiens]
Length = 579
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ + + ++
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSETETVHQFIPALS--- 416
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 474
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|126341837|ref|XP_001363414.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Monodelphis domestica]
Length = 586
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 136/301 (45%), Gaps = 30/301 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G +++ I I + +
Sbjct: 200 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN--AGASEKPITIHASPEGCST 257
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E D++ L+++ N+ G +IGK G +K D+ I
Sbjct: 258 ACKIIMEIMQKEAQDTKFTDEI----PLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 313
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YT 207
IS L +R +T+ G+++ +A E I+ K+ E + Q +P
Sbjct: 314 ISPLQELTLYNPERTITVKGSIETCGKAEEEIMKKIRESYESDLSAMNLQAHLLPGLNLN 373
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAA-HYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
G+F + G+P P VP AA +Y P + T ++ + +
Sbjct: 374 ALGLFPASTSGIPS----PSTLGVPSAAAATNYLP--------YGQQAETETVHLFIPAM 421
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+G ++G+ G++I ++S+ +GA IK++ ER V I+GP + A+ I K
Sbjct: 422 AVGAIIGKMGQHIKQLSRFAGASIKIAPPET--PDAKERMVIITGPPEAQFKAQGRIYGK 479
Query: 327 V 327
+
Sbjct: 480 L 480
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 62/214 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK GATI++ +Q+ I I R +++ G +++ +T+ + +
Sbjct: 200 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GASEKPITIHASPEGCST 257
Query: 184 ALELIL---LKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
A ++I+ K ++DT ++ + P+ + HN
Sbjct: 258 ACKIIMEIMQKEAQDTKFTDEI------------------------PLKILAHNN----- 288
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I Q + +I +S +
Sbjct: 289 --------------------------FVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL 322
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+K+ +Y SD
Sbjct: 323 YNPERTITVKGSIETCGKAEEEIMKKIRESYESD 356
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Query: 6 SSYVPSPDVHGKRSTAPVKS-LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQS 64
+S +PSP G S A + L + + + GA+IGK G I +
Sbjct: 382 TSGIPSPSTLGVPSAAAATNYLPYGQQAETETVHLFIPAMAVGAIIGKMGQHIKQLSRFA 441
Query: 65 GARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKL 124
GA I+++ P +R+++I+G + +A + KL E + + K +
Sbjct: 442 GASIKIAPPET--PDAKERMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEE---VKLEA 496
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
++ VP+ + G +IGK G T+ + + A + + R
Sbjct: 497 QIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 531
>gi|30795212|ref|NP_006538.2| insulin-like growth factor 2 mRNA-binding protein 3 [Homo sapiens]
gi|114612360|ref|XP_001157593.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 4 [Pan troglodytes]
gi|397472938|ref|XP_003807987.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3 [Pan
paniscus]
gi|254763311|sp|O00425.2|IF2B3_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=KH
domain-containing protein overexpressed in cancer;
Short=hKOC; AltName: Full=VICKZ family member 3
gi|4191612|gb|AAD09828.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|40807047|gb|AAH65269.1| Insulin-like growth factor 2 mRNA binding protein 3 [Homo sapiens]
gi|51095013|gb|EAL24257.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|119614193|gb|EAW93787.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Homo sapiens]
gi|261861412|dbj|BAI47228.1| insulin-like growth factor 2 mRNA binding protein 3 [synthetic
construct]
gi|410216456|gb|JAA05447.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410260770|gb|JAA18351.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410287810|gb|JAA22505.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410334615|gb|JAA36254.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
Length = 579
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 416
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 474
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|395830897|ref|XP_003788549.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Otolemur garnettii]
Length = 579
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 416
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 474
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|410952454|ref|XP_003982895.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Felis catus]
Length = 579
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 416
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 474
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|109067156|ref|XP_001098422.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 3 [Macaca mulatta]
gi|402863939|ref|XP_003896249.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Papio anubis]
Length = 579
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 416
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 474
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|73976012|ref|XP_539474.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Canis lupus familiaris]
Length = 579
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 416
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 474
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|355560757|gb|EHH17443.1| hypothetical protein EGK_13854 [Macaca mulatta]
gi|355747773|gb|EHH52270.1| hypothetical protein EGM_12689 [Macaca fascicularis]
Length = 583
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 416
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 474
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
E + ++V + +R VP+ + G +IGK G T K
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTAK 511
>gi|327295298|ref|XP_003232344.1| hypothetical protein TERG_07192 [Trichophyton rubrum CBS 118892]
gi|326465516|gb|EGD90969.1| hypothetical protein TERG_07192 [Trichophyton rubrum CBS 118892]
Length = 563
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 141/341 (41%), Gaps = 59/341 (17%)
Query: 7 SYVPSPDVH----GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+Y P + H G RS P + P + + N G +IG+ G + ++
Sbjct: 161 AYSPPSNRHYRAGGDRSPPP---RNRGPGSEENNETIEIDNKHVGLIIGRQGENLRRIEN 217
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE----------LHAE 112
++GAR+Q S E T R+ +SG I ID++++E + +
Sbjct: 218 ETGARVQFLDSAEH--NKTIRLCRLSGP-KSIRDKAKAEIDRIVSENNQARNDGRPIGQD 274
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ D +++VP+ + G +IG++G T++ + S I I+R S GL R V
Sbjct: 275 GRPGDADGSDTTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPV 332
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
TLTG+ RA ELIL + DT SG G P
Sbjct: 333 TLTGSQQAIQRAKELILGIVESDTR---------------TSGNQGQ----------REP 367
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
GG K N K + + E++G V+G+GG I E+ +SG +I +
Sbjct: 368 RGQGLGGENGGGGEKL-NEK--------MFIPKEYVGMVIGKGGETIRELQTLSGCKINI 418
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
+ ER+VT G Q +I A+ ++ KV A +R
Sbjct: 419 L---PLVAREPEREVTFYGVQTAIDAAKKAVLAKVEAAKNR 456
>gi|301771918|ref|XP_002921377.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ailuropoda melanoleuca]
Length = 579
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 136/319 (42%), Gaps = 34/319 (10%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQGSPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-- 195
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYE 352
Query: 196 ----TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
++ Q +P G+F P +PPP P Y +F
Sbjct: 353 NDIASMNLQAHLIPGLNLNALGLF------PPTSGMPPPTSGPPSAMTPPYP------QF 400
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ ++ T ++ + + +G ++G+ G++I ++S+ +GA IK++ R V
Sbjct: 401 EQSE---TETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVI 455
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+GP + A+ I K+
Sbjct: 456 ITGPPEAQFKAQGRIYGKI 474
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|407924223|gb|EKG17277.1| K-like protein [Macrophomina phaseolina MS6]
Length = 357
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 135/327 (41%), Gaps = 61/327 (18%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S P+ + + +R +VS+ AG +IGK G + + + ++G R +S+ P
Sbjct: 29 SGEPIPRTEEEYAQAQLTLRAIVSSKEAGVIIGKAGQNVANLRDETGVRAGVSK---VVP 85
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSI 136
G DR++ ++G + I +A LV LL + + T +RL++ ++ G+I
Sbjct: 86 GVHDRVLTVTGALSGISKAYHLVAKGLLEGAPSVGMGGVINTSGTHPVRLLISHNQMGTI 145
Query: 137 IGKAGATIKSFMDDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IG+AG IK D S + V + L S +R+V + GT + +A I L +
Sbjct: 146 IGRAGLKIKQIQDASGVRMVAQKEMLPQS----TERIVEIQGTPEGIEKATWEIGKCLID 201
Query: 195 D-------TLYSQTMTVPYTYAGVFFSGF----------HGMPYGAVP------------ 225
D LY+ + V G +GF HG + P
Sbjct: 202 DHERGYGTVLYNPAVRVQAGTTGPVTNGFTGNRSYNRTGHGNDFSDSPTYSRRSGSDAAS 261
Query: 226 -PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
PP+P + G + Q I + + +G ++GRGG I EI +
Sbjct: 262 RPPMPTTTED----------GEEIQTQN--------ISIPSDMVGCIIGRGGSKISEIRK 303
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISG 311
SGARI ++ T ER TI G
Sbjct: 304 SSGARISIAK--APHDETGERMFTIMG 328
>gi|326428680|gb|EGD74250.1| hypothetical protein PTSG_12419 [Salpingoeca sp. ATCC 50818]
Length = 619
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 124/295 (42%), Gaps = 71/295 (24%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G VIGKGG TIN Q QSGAR+Q+ + F ++ + ++G D I RA LV D +
Sbjct: 206 GMVIGKGGETINRLQEQSGARLQVIQDDPF---AQEKPLRMTGRRDAIERAKQLVKDLID 262
Query: 107 TE------------LHAEDQADDVGT--KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
E L + D +++ K+ + VP + G +IG+ G +IK +S
Sbjct: 263 PEPEHDPMYPSTMGLSSGDIVNNLSAYRSKKVEIKVPRVAVGRVIGRGGDSIKRIQAESG 322
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
A ++ + + R+ T+TGT+ + A E +++ + +D S + P
Sbjct: 323 ARVQFEPETNQDF----RIATITGTMPV-IEAAEKMIMDIIQDAEVSTSSARP------- 370
Query: 213 FSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVV 272
+DDR + V E G ++
Sbjct: 371 ---------------------------------------RDDRPRE-PMPVPQERAGLII 390
Query: 273 GRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
GRGG +I I Q SGA +++ +G ++ ISG I TA+ +I +K+
Sbjct: 391 GRGGESIRMIMQQSGAHVELDRAQPAVNG--DKTFWISGDPEQIATAKRLIQEKL 443
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
AG +IG+GG +I QSGA ++L R+ G D+ ISG ++I A L+ +KL
Sbjct: 386 AGLIIGRGGESIRMIMQQSGAHVELDRAQPAVNG--DKTFWISGDPEQIATAKRLIQEKL 443
Query: 106 LTELHAEDQADDVGTKTKLR 125
+A G +R
Sbjct: 444 DAHRRPPPRAMQSGPPGGMR 463
>gi|46125203|ref|XP_387155.1| hypothetical protein FG06979.1 [Gibberella zeae PH-1]
Length = 372
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 135/312 (43%), Gaps = 39/312 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G D I R
Sbjct: 49 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGGCDAISR 105
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL A V + ++L++ ++ G+IIG+ G IK D S +
Sbjct: 106 AYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVR 165
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY------ 206
V + L S +R+V + GT + RA+ I L +D T TV Y
Sbjct: 166 MVAQKEMLPQS----TERIVEVQGTPEGIQRAIWEICKCLVDD-WQRGTGTVLYNPVVRT 220
Query: 207 -------TYAGVFFSGFHGMP-YGAVPPPV-----------PAVPHNTAAHYGPNMGGRK 247
T G F+ G YG P + + P+N + + G
Sbjct: 221 QPSSGGNTSGGAGFNQGSGRSDYGGSPRVMRTGNGADFSNGSSRPYNRRSDSDAALRGPP 280
Query: 248 FQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKV 307
+ + + I + + +G ++GR G I EI + SGARI ++ T ER
Sbjct: 281 THDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA--PHDETGERMF 338
Query: 308 TISGPQRSIRTA 319
TI G ++ +A
Sbjct: 339 TIMGTAKANESA 350
>gi|302658378|ref|XP_003020893.1| hypothetical protein TRV_04969 [Trichophyton verrucosum HKI 0517]
gi|291184763|gb|EFE40275.1| hypothetical protein TRV_04969 [Trichophyton verrucosum HKI 0517]
Length = 561
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 59/341 (17%)
Query: 7 SYVPSPDVH----GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+Y P + H G RS P + P + N G +IG+ G + ++
Sbjct: 161 AYSPPSNRHYRAGGDRSPPP---RNRGPVSDENNETIEIDNKHVGLIIGRQGENLRRIEN 217
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH-AEDQADDVGTK 121
++GAR+Q S E T R+ +SG I ID++++E + A + +G
Sbjct: 218 ETGARVQFLDSAEH--NKTIRLCRLSGP-KSIRDKAKAEIDRIVSENNQARNDGRPIGQD 274
Query: 122 TK---------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ +++VP+ + G +IG++G T++ + S I I+R S GL R V
Sbjct: 275 GRPVDADGSETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPV 332
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
TLTG+ RA ELIL + DT SG G P
Sbjct: 333 TLTGSQQAIQRAKELILGIVESDTR---------------TSGNQGQ----------REP 367
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ GG K N+K + + E++G V+G+GG I E+ +SG +I +
Sbjct: 368 RGQGSGGENGGGGEKL-NDK--------MFIPKEYVGMVIGKGGEAIRELQTLSGCKINI 418
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
+ ER+VT G Q +I A+ ++ KV A +R
Sbjct: 419 L---PLVAREPEREVTFYGVQTAIDAAKKAVLAKVEAAKNR 456
>gi|225429462|ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGKGG TI Q QSGA+IQ++R + P + R++ + GT D+I
Sbjct: 136 TSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQI 195
Query: 95 LRAVDLVIDKLLTELHAEDQA-------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+A L+ D +L+E A G++ + + VPN+ G IIGK G TIK+
Sbjct: 196 AKAEQLIND-VLSEAEAGGSGIVSRRLTGQAGSE-QFVMKVPNNKVGLIIGKGGETIKNM 253
Query: 148 MDDSQAVIKISRLDHSYYGLN--DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+ A I++ L H G +R V + GT ++ A +L+ +SE+ + + M
Sbjct: 254 QARTGARIQVIPL-HLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGG 312
Query: 206 YT---YAGVFFSGFHGMPYGAVP 225
Y Y SG+ G P GA P
Sbjct: 313 YPQQGYQARPPSGW-GAPPGAPP 334
>gi|241956872|ref|XP_002421156.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223644499|emb|CAX41315.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 533
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 173/421 (41%), Gaps = 97/421 (23%)
Query: 1 METNESSYVPSPDVHG-KRSTA------PVKSLSSDPTEKPTYIRFLVSNPL--AGAVIG 51
ET E +YVP H +++TA PV + + PT+I+ + P+ A ++G
Sbjct: 119 QETLEPAYVPPESDHADEQNTASSSSSKPVSNHRD--RDDPTFIQLRMYCPVKEASTIVG 176
Query: 52 KGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHA 111
+ G TIN + ++ RI +S E G +RI+ + G + + RA L+ +L E
Sbjct: 177 RKGETINHLREKANVRITVS---ENLKGVPERIVAVKGPAENVARAFGLITRVILEE--P 231
Query: 112 EDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDR 170
ED+ + ++ L+L++P+ G IIGK G + ++S A +K + Y DR
Sbjct: 232 EDEPASITSQQYNLKLLIPHPMIGFIIGKQGLKFREIEENSAAKLKAAENPLPYS--TDR 289
Query: 171 LVTLTGTLDEQMRALELI---------LLKLSEDTLYSQTMTVPYTYAGVFFSGFH---- 217
++++ G D A+ I +LK ++ LY+ P + + H
Sbjct: 290 VLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKNKVVLYNPANYQPTDHQNLGGRQRHPPNN 349
Query: 218 ----GMPYGAVPPPVPAVPH---------NTAAHYGPNMGGRKF---------------- 248
M Y A PP PH N + + P + + F
Sbjct: 350 SYNNPMGYQAKLPPFSKPPHHSQHQQSPYNFSMMFQPAVQPQHFGTPVTSNPNAISPVGM 409
Query: 249 --------QNNKDDRTNSLTIG--------------------VADEHIGFVVGRGGRNIM 280
QN D + +G VA+ IG V+G+GG NI
Sbjct: 410 QPSINVPPQNQYTDEFGNTIVGEVITTPPVQAGQDKYNQDVFVANSSIGSVIGKGGNNIK 469
Query: 281 EISQISGAR-IKVS-DRGD--FFSG----TSERKVTISGPQRSIRTAESMIMQKVAYASD 332
I + S +K+ D+G G T+ RK+T++G SI+TA +I Q++ +
Sbjct: 470 HIRETSACTYVKIEPDKGQSMMLGGGKGMTNIRKLTLTGSLNSIQTAIYLINQRINADRE 529
Query: 333 R 333
R
Sbjct: 530 R 530
>gi|119614192|gb|EAW93786.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_a
[Homo sapiens]
Length = 422
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 41 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 94
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 95 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 154
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 155 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 214
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 215 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 259
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 260 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 317
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 261 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 318
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 319 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 374
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 375 NDQVVVKITG 384
>gi|344270303|ref|XP_003406985.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Loxodonta africana]
Length = 492
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 111 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 164
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 165 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 224
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G+++ +A E I+ K+ E ++ Q +P
Sbjct: 225 ISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 284
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 285 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 329
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 330 VGAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKI 387
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 331 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 388
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 389 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 444
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 445 NDQVVVKITG 454
>gi|281353861|gb|EFB29445.1| hypothetical protein PANDA_010268 [Ailuropoda melanoleuca]
Length = 596
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 136/319 (42%), Gaps = 34/319 (10%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQGSPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-- 195
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYE 352
Query: 196 ----TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
++ Q +P G+F P +PPP P Y +F
Sbjct: 353 NDIASMNLQAHLIPGLNLNALGLF------PPTSGMPPPTSGPPSAMTPPYP------QF 400
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ ++ T ++ + + +G ++G+ G++I ++S+ +GA IK++ R V
Sbjct: 401 EQSE---TETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVI 455
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+GP + A+ I K+
Sbjct: 456 ITGPPEAQFKAQGRIYGKI 474
>gi|242061024|ref|XP_002451801.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
gi|241931632|gb|EES04777.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
Length = 688
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGK G TI Q QSGA+IQ++R HE PG R + +SG D+I +A
Sbjct: 146 KIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRPVELSGNPDQISKA 205
Query: 98 VDLVIDKLLTELHAED---------QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
L I ++L E A A G +T ++ + N+ G +IGK G TIKS
Sbjct: 206 EQL-IKEVLAEADAGSSGGGSGRKYNAPQPGGET-FQMKIANNKVGLVIGKGGETIKSMQ 263
Query: 149 DDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ A I++ L D S +R V + GT ++ A +L++ SE+
Sbjct: 264 QKTGARIQVIPLHLPAGDTS----TERTVHIDGTPEQIESAKQLVIEVTSEN 311
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 48/208 (23%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T ++ +PN G IIGKAG TI+ S A I+++R + G R V L+G D+
Sbjct: 143 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRPVELSGNPDQI 202
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
+A +LI L+E S Y P
Sbjct: 203 SKAEQLIKEVLAEADAGSSGGGSGRKYNA------------------------------P 232
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV----SDRGD 297
GG FQ + +A+ +G V+G+GG I + Q +GARI+V GD
Sbjct: 233 QPGGETFQ-----------MKIANNKVGLVIGKGGETIKSMQQKTGARIQVIPLHLPAGD 281
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQ 325
++ER V I G I +A+ ++++
Sbjct: 282 T---STERTVHIDGTPEQIESAKQLVIE 306
>gi|326480928|gb|EGE04938.1| KH domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 563
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 52/303 (17%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IG+ G + ++++GAR+Q S E T R+ +SG I
Sbjct: 196 IDNKHVGLIIGRQGENLRRIENETGARVQFLDSAEH--NKTIRLCRLSGP-KSIRDKAKA 252
Query: 101 VIDKLLTELHA----------EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
ID++++E + + + D +++VP+ + G +IG++G T++ +
Sbjct: 253 EIDRIVSENNQARNDGRPSGQDGRPGDADGSETTKIMVPDRTVGLVIGRSGETVRDLAER 312
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
S I I+R S GL R VTLTG+ RA ELIL + DT
Sbjct: 313 SGCRINIARDGESINGL--RPVTLTGSQQAIQRAKELILGIVESDTR------------- 357
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGF 270
SG G P + GG K N+K + + E++G
Sbjct: 358 --TSGNQGQ----------REPRGQGSGGENGGGGEKL-NDK--------MFIPKEYVGM 396
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYA 330
V+G+GG I E+ +SG +I + + ER+VT G Q +I A+ ++ KV A
Sbjct: 397 VIGKGGETIRELQTLSGCKINIL---PLVAREPEREVTFYGVQTAIDAAKKAVLAKVEAA 453
Query: 331 SDR 333
+R
Sbjct: 454 KNR 456
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V + G VIG+ G T+ D +SG RI ++R E G R + ++G+ I RA
Sbjct: 287 KIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPVTLTGSQQAIQRA 344
Query: 98 VDLVIDKLLTELHAEDQADD--------------VGTKTKLRLIVPNSSCGSIIGKAGAT 143
+L++ + ++ G K ++ +P G +IGK G T
Sbjct: 345 KELILGIVESDTRTSGNQGQREPRGQGSGGENGGGGEKLNDKMFIPKEYVGMVIGKGGET 404
Query: 144 IKSFMDDSQAVIKI 157
I+ S I I
Sbjct: 405 IRELQTLSGCKINI 418
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
N+ TI + ++H+G ++GR G N+ I +GAR++ D + + R +SGP +SI
Sbjct: 190 NNETIEIDNKHVGLIIGRQGENLRRIENETGARVQFLDSAEHNK--TIRLCRLSGP-KSI 246
Query: 317 R 317
R
Sbjct: 247 R 247
>gi|326473929|gb|EGD97938.1| hypothetical protein TESG_05238 [Trichophyton tonsurans CBS 112818]
Length = 545
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 52/303 (17%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IG+ G + ++++GAR+Q S E T R+ +SG I
Sbjct: 196 IDNKHVGLIIGRQGENLRRIENETGARVQFLDSAEHN--KTIRLCRLSGP-KSIRDKAKA 252
Query: 101 VIDKLLTELHA----------EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
ID++++E + + + D +++VP+ + G +IG++G T++ +
Sbjct: 253 EIDRIVSENNQARNDGRPSGQDGRPGDADGSETTKIMVPDRTVGLVIGRSGETVRDLAER 312
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
S I I+R S GL R VTLTG+ RA ELIL + DT
Sbjct: 313 SGCRINIARDGESINGL--RPVTLTGSQQAIQRAKELILGIVESDTR------------- 357
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGF 270
SG G P + GG K N+K + + E++G
Sbjct: 358 --TSGNQGQ----------REPRGQGSGGENGGGGEKL-NDK--------MFIPKEYVGM 396
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYA 330
V+G+GG I E+ +SG +I + + ER+VT G Q +I A+ ++ KV A
Sbjct: 397 VIGKGGETIRELQTLSGCKINIL---PLVAREPEREVTFYGVQTAIDAAKKAVLAKVEAA 453
Query: 331 SDR 333
+R
Sbjct: 454 KNR 456
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V + G VIG+ G T+ D +SG RI ++R E G R + ++G+ I RA
Sbjct: 287 KIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPVTLTGSQQAIQRA 344
Query: 98 VDLVIDKLLTELHAEDQADD--------------VGTKTKLRLIVPNSSCGSIIGKAGAT 143
+L++ + ++ G K ++ +P G +IGK G T
Sbjct: 345 KELILGIVESDTRTSGNQGQREPRGQGSGGENGGGGEKLNDKMFIPKEYVGMVIGKGGET 404
Query: 144 IKSFMDDSQAVIKI 157
I+ S I I
Sbjct: 405 IRELQTLSGCKINI 418
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
N+ TI + ++H+G ++GR G N+ I +GAR++ D + + R +SGP +SI
Sbjct: 190 NNETIEIDNKHVGLIIGRQGENLRRIENETGARVQFLDSAEHNK--TIRLCRLSGP-KSI 246
Query: 317 R 317
R
Sbjct: 247 R 247
>gi|395738667|ref|XP_003780758.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2
mRNA-binding protein 3 [Pongo abelii]
Length = 567
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 186 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 239
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 240 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 299
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 300 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 359
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 360 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 404
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 405 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 462
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 406 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 463
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 464 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 519
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 520 NDQVVVKITG 529
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 38/315 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 196
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 197 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 252
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 253 ISSLQDLSIYN-PERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNQQANLIPGLNL 311
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP-------HNTAAH-------YGPNMGGRKFQNNK 252
+ G+F +G +PPP H A H Y P+ G ++
Sbjct: 312 SALGIFSTGL-----SVLPPPTGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHS 366
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP
Sbjct: 367 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGP 424
Query: 313 QRSIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 425 PEAQFKAQGRIFGKL 439
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 196
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 197 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 227
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 228 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 261
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 262 YNPERTITVKGTVEACANAEVEIMKKLREAFENDML 297
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 373 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 430
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 431 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 487
Query: 157 ISR 159
+ R
Sbjct: 488 VPR 490
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 373 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 430
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 431 AQGRIFGKLKEENFFN 446
>gi|221504974|gb|EEE30639.1| KH domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 715
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
Y++ L+SN LAG +IG G I + +GA+I LS +FPGTT+R++ GT +
Sbjct: 65 CYVKMLISNQLAGMIIGNTGQEIKHLKQVTGAKIVLSPHGMYFPGTTERLVAAEGTERAV 124
Query: 95 LRAVDLVIDKL--LTELHAEDQADDV---------------GTKTKLRLIVPNSSCGSII 137
+ VD +ID++ L ++ ++ +D+ ++ VP + GS+I
Sbjct: 125 FQVVDWIIDRMDELAQMPSQPSTEDLLRSTTSLSSGSGGSLSRTLACKICVPRAVIGSLI 184
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSY-YGLNDRLVTLTGTLDEQMRALELILLK 191
GK G I+S ++A I IS L + +R+VT+ + +R L +
Sbjct: 185 GKKGGYIQSVRLATEANINISPLFVTADEACAERVVTVESPRKQSLRTAVFTLAR 239
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
++++ G ++G G+ I + Q++GA+I +S G +F GT+ER V G +R+
Sbjct: 71 ISNQLAGMIIGNTGQEIKHLKQVTGAKIVLSPHGMYFPGTTERLVAAEGTERA------- 123
Query: 323 IMQKVAYASDRL 334
+ Q V + DR+
Sbjct: 124 VFQVVDWIIDRM 135
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 21/178 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++ G++IGK G + F+ +SGA+I +S +RI+ ISG+ + I +
Sbjct: 15 LRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG-----SCPERIVTISGSTEAIYK 69
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKAGATIKSFMDD 150
A L+ K+ E E Q G LRLIVP S CGS+IGK G IK +
Sbjct: 70 AFSLICTKV--EEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREA 127
Query: 151 SQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+ A I+++ L S +R VTLTGT D + + I + E + +T+PY
Sbjct: 128 TGAQIQVASDVLPQS----TERAVTLTGTRDSITQCIFHICAVMVESP--PKGVTIPY 179
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 84/201 (41%), Gaps = 51/201 (25%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
DD LRLI+ GSIIGK G +K F ++S A I IS D S +R+VT++
Sbjct: 7 DDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINIS--DGS---CPERIVTIS 61
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
G+ + +A LI K+ E T G G GM
Sbjct: 62 GSTEAIYKAFSLICTKVEEFIEMQNGKT------GATAIGKCGM---------------- 99
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
+L + V G ++G+GG I EI + +GA+I+V+
Sbjct: 100 ----------------------TLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVAS- 136
Query: 296 GDFFSGTSERKVTISGPQRSI 316
D ++ER VT++G + SI
Sbjct: 137 -DVLPQSTERAVTLTGTRDSI 156
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF-FSGTSERKVTISGP 312
+T+ +T V ++ IG ++G+GG I EI QISGA I++S+ D S +++R +TI+G
Sbjct: 313 QQTHEMT--VPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGN 370
Query: 313 QRSIRTAESMI 323
S+ A+ +I
Sbjct: 371 PDSVALAQYLI 381
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 251 NKDDRTNSLTIGV--ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+KDD SLT+ + + +G ++G+ G + + SGA+I +SD ER VT
Sbjct: 5 SKDDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-----GSCPERIVT 59
Query: 309 ISGPQRSIRTAESMIMQKV 327
ISG +I A S+I KV
Sbjct: 60 ISGSTEAIYKAFSLICTKV 78
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF-FPGTTDRIIMISGTIDEILRAVD 99
V N L G +IGKGG+ I + + SGA I++S + +TDR I I+G D + A
Sbjct: 320 VPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALAQY 379
Query: 100 LV 101
L+
Sbjct: 380 LI 381
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGT 177
G + + VPN G IIGK G I S A+I+IS D DR +T+TG
Sbjct: 311 GGQQTHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGN 370
Query: 178 LDEQMRALELILLKL 192
D A LI + L
Sbjct: 371 PDSVALAQYLINMSL 385
>gi|296808217|ref|XP_002844447.1| P-element somatic inhibitor [Arthroderma otae CBS 113480]
gi|238843930|gb|EEQ33592.1| P-element somatic inhibitor [Arthroderma otae CBS 113480]
Length = 570
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 146/343 (42%), Gaps = 65/343 (18%)
Query: 7 SYVPSPDVHGKRS---TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQ 63
+Y PS + H +++ + P ++ S P + I + N G +IG+ G + +++
Sbjct: 158 AYSPSSNRHYRKAGDRSPPPRNRGSGPEDNSETIE--IDNKYVGLIIGRQGENLRRIENE 215
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILR-AVDLVIDKLLTELHAEDQAD------ 116
+GAR+Q S E T R+ ++G+ +++R ID++++E + + + D
Sbjct: 216 TGARVQFLDSAEH--NKTIRLYRLTGS--KLVRDKAKAEIDRVVSEGN-QSRGDGRPSDR 270
Query: 117 ---------DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL 167
D ++++VP+ + G +IG++G T++ + S I I+R S GL
Sbjct: 271 SGQDGGRSGDGDGSDSMKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL 330
Query: 168 NDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPP 227
R VTLTG+ RA ELI+ + D G G
Sbjct: 331 --RPVTLTGSQQAMQRAKELIVGIVESDNR----------------PGNQGQ-------- 364
Query: 228 VPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISG 287
P A GG N+K I + E +G V+G+GG I E+ SG
Sbjct: 365 --REPRGQAMSADNGGGGGDKLNDK--------IFIPKEAVGMVIGKGGETIRELQSFSG 414
Query: 288 ARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYA 330
+I + ER+VT G Q +I A+ +M KV A
Sbjct: 415 CKINIL---PLVGREPEREVTFYGSQTAIDAAKRAVMAKVEAA 454
>gi|221484798|gb|EEE23092.1| KH domain-containing protein, putative [Toxoplasma gondii GT1]
Length = 715
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
Y++ L+SN LAG +IG G I + +GA+I LS +FPGTT+R++ GT +
Sbjct: 65 CYVKMLISNQLAGMIIGNTGQEIKHLKQVTGAKIVLSPHGMYFPGTTERLVAAEGTERAV 124
Query: 95 LRAVDLVIDKL--LTELHAEDQADDV---------------GTKTKLRLIVPNSSCGSII 137
+ VD +ID++ L ++ ++ +D+ ++ VP + GS+I
Sbjct: 125 FQVVDWIIDRMDELAQMPSQPSTEDLLRSTTSLSSGSGGSLSRTLACKICVPRAVIGSLI 184
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSY-YGLNDRLVTLTGTLDEQMRALELILLK 191
GK G I+S ++A I IS L + +R+VT+ + +R L +
Sbjct: 185 GKKGGYIQSVRLATEANINISPLFVTADEACAERVVTVESPRKQSLRTAVFTLAR 239
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
++++ G ++G G+ I + Q++GA+I +S G +F GT+ER V G +R+
Sbjct: 71 ISNQLAGMIIGNTGQEIKHLKQVTGAKIVLSPHGMYFPGTTERLVAAEGTERA------- 123
Query: 323 IMQKVAYASDRL 334
+ Q V + DR+
Sbjct: 124 VFQVVDWIIDRM 135
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 37/303 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 252 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 307
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 308 ISSLQDLSIYN-PERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNL 366
Query: 207 TYAGVFFSGFHGMPYGAVPPPVP--AVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
+ G+F +G +P PP P A P AA Y P F + + N + +
Sbjct: 367 SALGIFSTGLSVLP----PPSGPRGAPP---AAPYHP------FAYPEQEIVN---LFIP 410
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
+ +G ++G+ G +I ++++ +GA IK++ SER V I+GP + A+ I
Sbjct: 411 TQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIF 468
Query: 325 QKV 327
K+
Sbjct: 469 GKL 471
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 251
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 252 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 282
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 283 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 316
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 317 YNPERTITVKGTVEACANAEIEIMKKLREAFENDML 352
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 47/207 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 275 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAN 334
Query: 97 AVDLVIDKLLTELHAED------QADDVG------------------------------- 119
A ++ I K L E D QA+ +
Sbjct: 335 A-EIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPSGPRGAPPAAP 393
Query: 120 -------TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ + L +P + G+IIGK GA IK + A IKI+ + +++R+V
Sbjct: 394 YHPFAYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMV 451
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
+TG + Q +A I KL E+ ++
Sbjct: 452 IITGPPEAQFKAQGRIFGKLKEENFFN 478
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 7 SYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGA 66
S +P P G R P + + + GA+IGK G+ I +GA
Sbjct: 377 SVLPPPS--GPRGAPPAAPYHPFAYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 434
Query: 67 RIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRL 126
I+++ + P ++R+++I+G + +A + KL E + + ++V + +R
Sbjct: 435 SIKIAPAE--GPDVSERMVIITGPPEAQFKAQGRIFGKLKEE-NFFNPKEEVKLEAHIR- 490
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
VP+S+ G +IGK G T+ + + A + + R
Sbjct: 491 -VPSSTAGRVIGKGGKTVNELQNLTSAEVIVPR 522
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 38/315 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 190
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 191 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 246
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 247 ISSLQDLSIYN-PERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNQQANLIPGLNL 305
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP-------HNTAAH-------YGPNMGGRKFQNNK 252
+ G+F +G +PPP H A H Y P+ G ++
Sbjct: 306 SALGIFSTGL-----SVLPPPTGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHS 360
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP
Sbjct: 361 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGP 418
Query: 313 QRSIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 419 PEAQFKAQGRIFGKL 433
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 190
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 191 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 221
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 222 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 255
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 256 YNPERTITVKGTVEACANAEVEIMKKLREAFENDML 291
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 367 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 424
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 425 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 481
Query: 157 ISR 159
+ R
Sbjct: 482 VPR 484
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 367 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 424
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 425 AQGRIFGKLKEENFFN 440
>gi|237843499|ref|XP_002371047.1| KH domain-containing protein [Toxoplasma gondii ME49]
gi|211968711|gb|EEB03907.1| KH domain-containing protein [Toxoplasma gondii ME49]
Length = 715
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
Y++ L+SN LAG +IG G I + +GA+I LS +FPGTT+R++ GT +
Sbjct: 65 CYVKMLISNQLAGMIIGNTGQEIKHLKQVTGAKIVLSPHGMYFPGTTERLVAAEGTERAV 124
Query: 95 LRAVDLVIDKL--LTELHAEDQADDV---------------GTKTKLRLIVPNSSCGSII 137
+ VD +ID++ L ++ ++ +D+ ++ VP + GS+I
Sbjct: 125 FQVVDWIIDRMDELAQMPSQPSTEDLLRSTTSLSSGSGGSLSRTLACKICVPRAVIGSLI 184
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSY-YGLNDRLVTLTGTLDEQMRALELILLK 191
GK G I+S ++A I IS L + +R+VT+ + +R L +
Sbjct: 185 GKKGGYIQSVRLATEANINISPLFVTADEACAERVVTVESPRKQSLRTAVFTLAR 239
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
++++ G ++G G+ I + Q++GA+I +S G +F GT+ER V G +R+
Sbjct: 71 ISNQLAGMIIGNTGQEIKHLKQVTGAKIVLSPHGMYFPGTTERLVAAEGTERA------- 123
Query: 323 IMQKVAYASDRL 334
+ Q V + DR+
Sbjct: 124 VFQVVDWIIDRM 135
>gi|302697985|ref|XP_003038671.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
gi|300112368|gb|EFJ03769.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
Length = 308
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 35/288 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGKGG + + + +G + +S+ PG +R++ I+G+ + I +
Sbjct: 3 LRALVSTKDAGVIIGKGGKNVAELREVTGVKAGVSK---VVPGVHERVLTINGSPEGIAK 59
Query: 97 AVDLVIDKLLTELHAEDQADD--VGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A +I +L++ + D V T T +RL+V ++ G+IIG+ G IK+ D S
Sbjct: 60 AYQHIIAQLVSASAGSPELDASVVATNPHTMIRLLVSHNLMGTIIGRGGLKIKAIQDASG 119
Query: 153 A--VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY---- 206
A V + L S +R+V + G DE RA+ I L ED T TV Y
Sbjct: 120 ARLVAQKDMLPQS----TERVVEVHGVPDEIGRAIYEISKSLLED-WERNTGTVLYHPQA 174
Query: 207 ---TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
+ A +G GA + P G + N RT +++I
Sbjct: 175 AEASGAAARRPSTNGFSPGARRRAISPTPS----------AGSQSTPNALIRTQNISI-- 222
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
+ +G ++GRGG I EI ++SG++I ++ T ER TI G
Sbjct: 223 PSDMVGCIIGRGGTKITEIRRLSGSKISIAK--APHDETGERMFTIVG 268
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 83/208 (39%), Gaps = 56/208 (26%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T IR LVS+ L G +IG+GG I Q SGAR L + P +T+R++ + G DEI
Sbjct: 89 TMIRLLVSHNLMGTIIGRGGLKIKAIQDASGAR--LVAQKDMLPQSTERVVEVHGVPDEI 146
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGT-------------------------KTKLRLIVP 129
RA+ + LL ED + GT + R I P
Sbjct: 147 GRAIYEISKSLL-----EDWERNTGTVLYHPQAAEASGAAARRPSTNGFSPGARRRAISP 201
Query: 130 NSSCGS----------------------IIGKAGATIKSFMDDSQAVIKISRLDHSYYGL 167
S GS IIG+ G I S + I I++ H G
Sbjct: 202 TPSAGSQSTPNALIRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKAPHDETG- 260
Query: 168 NDRLVTLTGTLDEQMRALELILLKLSED 195
+R+ T+ G+ + +AL L+ +L +
Sbjct: 261 -ERMFTIVGSPEANEKALYLLYNQLESE 287
>gi|405122865|gb|AFR97631.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 357
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 8/162 (4%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S+ P DP + +R L+ A +IG+GG+ +N+ + +S AR+ +S E P
Sbjct: 64 SSEPTAPAKPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVS---ESIP 120
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSII 137
G +RI+ +SG +D + +A L++ ++ E D G++ ++ I+PNS GS+I
Sbjct: 121 GNPERILNVSGPLDAVAKAFGLIVRRINDEPF--DVPSVPGSRAVTIKFIIPNSRMGSVI 178
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
GK G+ IK + S A + S + G +R+++++G D
Sbjct: 179 GKGGSKIKEIQEASGARLNAS--EAMLPGSTERVLSVSGVAD 218
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P + I+F++ N G+VIGKGGS I + Q SGAR L+ S PG+T+R++
Sbjct: 154 VPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGAR--LNASEAMLPGSTERVL 211
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK--------------------LR 125
+SG D + AV I +L E A+ G+ + +
Sbjct: 212 SVSGVADAVHIAV-YYIGTILLEYQDRYPANATGSYKQSQSRGPPANSNAPPPPGMQTQQ 270
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG-----LNDRLVTLTGTLDE 180
+ +PN+ G+IIG+ G+ I S I+++ + G +RLVT+TG D
Sbjct: 271 IFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDN 330
Query: 181 QMRALELILLKLSED 195
A+ L+ ++ +
Sbjct: 331 INAAVALLYSRVEAE 345
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 27/219 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV AG +IGKGG +++ + S AR+ +S + PG +RI+ + G + + +
Sbjct: 81 LRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNIS---DIVPGAAERILTVVGPVSAVAK 137
Query: 97 AVDLVIDKLLTE-LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV +K++ E AED + +++++ + GSIIGK+G+ I+S + S A
Sbjct: 138 AYALVAEKIIEENTLAEDNKGPIQQDVTIKILILANRMGSIIGKSGSVIRSIQETSGA-- 195
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
K+S + +R+VT+ GT D A+E + K+ D L Q
Sbjct: 196 KVSAQEEPLPLSTERVVTIHGTPD----AIEQAVKKIG-DILVDQP-------------N 237
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD 254
HG Y P A PH +++++G G R ++ + D+
Sbjct: 238 HHGN-YMLYKPIAGAAPHTSSSNHG--NGHRNYRRSNDN 273
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P ++ I+ L+ G++IGK GS I Q SGA++ S E P +T+R++ I G
Sbjct: 159 PIQQDVTIKILILANRMGSIIGKSGSVIRSIQETSGAKV--SAQEEPLPLSTERVVTIHG 216
Query: 90 TIDEILRAVDLVIDKLLTE 108
T D I +AV + D L+ +
Sbjct: 217 TPDAIEQAVKKIGDILVDQ 235
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
+G+ D G ++G+GG+N+ EI S AR+ +S D G +ER +T+ GP ++ A
Sbjct: 85 VGMKD--AGLIIGKGGKNVSEIRDSSMARVNIS---DIVPGAAERILTVVGPVSAVAKAY 139
Query: 321 SMIMQKV 327
+++ +K+
Sbjct: 140 ALVAEKI 146
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
T S I + +E +G ++G+GG I EI Q SG+ IK++D + + ER +TI+G S
Sbjct: 348 TQSQQIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADPS---TDSHERLITITGTPES 404
Query: 316 IRTAESMIMQKVAYASDRL 334
+ A ++ ++ R+
Sbjct: 405 NQMALYLLYSRLEAEQKRV 423
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G IIGK G I S + IKI+ + +RL+T+TGT + A
Sbjct: 352 QIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADPSTDSH---ERLITITGTPESNQMA 408
Query: 185 LELILLKLSED 195
L L+ +L +
Sbjct: 409 LYLLYSRLEAE 419
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS----RSHEFFPGTTDRIIMISGTIDE 93
+ + N + G +IGKGG IN+ + SG+ I+++ SHE R+I I+GT +
Sbjct: 352 QIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADPSTDSHE-------RLITITGTPES 404
Query: 94 ILRAVDLVIDKLLTE 108
A+ L+ +L E
Sbjct: 405 NQMALYLLYSRLEAE 419
>gi|339234853|ref|XP_003378981.1| putative KH domain protein [Trichinella spiralis]
gi|316978396|gb|EFV61386.1| putative KH domain protein [Trichinella spiralis]
Length = 432
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 115/227 (50%), Gaps = 30/227 (13%)
Query: 13 DVHGKRSTAPVKSLSSD-PT---EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGA-R 67
+V+ TAPV++ +S P E+ I+ L+ +GAVIG+ GS I + +S +
Sbjct: 25 NVNSSSLTAPVQAQNSTVPNHGDEQQVMIKVLIPRTASGAVIGRNGSHIASLKRKSLLHQ 84
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK-----T 122
+++S+ E FP +R+++I+G + ++ + + K+ + + D+ K +
Sbjct: 85 LKMSKPSELFP---ERVLLIAGPLSSVVEVIQFTMTKIQEQQAFNTKPDEFDFKHANRSS 141
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ- 181
+++L++ NSS G IIGKAG I+ +++ A +K+S S + +R+VT+ G DE
Sbjct: 142 QVKLVIANSSAGVIIGKAGEEIRVIKEETHAQVKVSSRTQS---VAERVVTILGA-DEAI 197
Query: 182 -MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPP 227
+ AL ++L K++ D + + Y G P P P
Sbjct: 198 TLAALRVVLNKVAADPNSTNNGRISY-----------GQPQAPAPAP 233
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 139/303 (45%), Gaps = 26/303 (8%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+ + ++ +++N AG +IGK G I + ++ A++++S + +R++ I G +
Sbjct: 139 RSSQVKLVIANSSAGVIIGKAGEEIRVIKEETHAQVKVSSRTQ---SVAERVVTILGADE 195
Query: 93 EI-LRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
I L A+ +V++K+ A+ + + G + + P + S+ AG + + M
Sbjct: 196 AITLAALRVVLNKV----AADPNSTNNGRISYGQPQAPAPAPSSV---AGLDLVAAMVTE 248
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGV 211
+ ++ R +S + D + + L ++ L L K+ D + + + V +
Sbjct: 249 RVRAELVRRGYSQPAVVDVVQAVNVMLKYELIGCGLDLEKIYADVMAAYSSQVEWATTPT 308
Query: 212 FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFV 271
G+ YG+ N H N+ + Q DR + + V + +G V
Sbjct: 309 PL-GYCTSHYGSC--------RNRQQHLPDNV--LRVQLEGIDR---VELEVVEWIVGAV 354
Query: 272 VGRGGRNIMEISQISGARIKVSDRGDFFSGTS-ERKVTISGPQRSIRTAESMIMQKVAYA 330
+G+ G +++I + SGA+++VS RG + S +R + I+G Q SI A +++ VA
Sbjct: 355 LGKNGFTLLDIQRRSGAKVEVSRRGTVQNAQSAKRLIIITGQQTSILQARALVCATVAAE 414
Query: 331 SDR 333
R
Sbjct: 415 LSR 417
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 49/206 (23%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+++++P ++ G++IG+ G+ I S S ++ ++ +R++ + G L +
Sbjct: 53 IKVLIPRTASGAVIGRNGSHIASLKRKS--LLHQLKMSKPSELFPERVLLIAGPLSSVVE 110
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ + K+ E + N
Sbjct: 111 VIQFTMTKIQEQQAF-------------------------------------------NT 127
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+F +R++ + + +A+ G ++G+ G I I + + A++KVS R +
Sbjct: 128 KPDEFDFKHANRSSQVKLVIANSSAGVIIGKAGEEIRVIKEETHAQVKVSSRTQ---SVA 184
Query: 304 ERKVTISGPQRSIRTAE-SMIMQKVA 328
ER VTI G +I A +++ KVA
Sbjct: 185 ERVVTILGADEAITLAALRVVLNKVA 210
>gi|408389667|gb|EKJ69103.1| hypothetical protein FPSE_10721 [Fusarium pseudograminearum CS3096]
Length = 474
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+P A VIGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 114 HVRAVISSPEAATVIGKGGENVSNIRKLSNAKCTVS---DYQKGAVERILTVSGIVDAVA 170
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E +++ +KT LRL++P+ GSIIGK GA I+ D S A
Sbjct: 171 KAFGLIIRTLNNE--PLNESSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQDASGAR 228
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 229 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNDRFGGPAASAYA 281
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P ++ HYG
Sbjct: 282 TRSGAPAGSIPGGMQVVPYSPQPSSGHYG 310
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 28/309 (9%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS + K +R L+ + L G++IGKGG+ I + Q SGAR+ S S P +++R ++
Sbjct: 188 SSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQDASGARLNASDS--CLPMSSERSLV 245
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ G D + A V LL +Q +D R P +S + ++GA S
Sbjct: 246 VMGVADAVHIATYYVGSTLL------EQLND-------RFGGPAASAYAT--RSGAPAGS 290
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
Q V + +YG ++ + + +
Sbjct: 291 IPGGMQVVPYSPQPSSGHYGRSENYGRHNDRRSHHLPPAPYPQQYPPHAAAQANPAMPMH 350
Query: 207 TYAGVFFSGFHGMPYGA--VPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
+ P+ +PP PH A P MGG + I +
Sbjct: 351 YGGAQGGGAYGAAPHAQPHMPPHTGPQPHGGAPQAQP-MGGAIPGGPITQQ-----IYIP 404
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
++ +G ++G+GG+ I EI Q+S + IK+++ D ++ER VTI+G + R A M+
Sbjct: 405 NDMVGAIIGKGGQKINEIRQMSNSVIKINEPQD---NSNERLVTITGTEECNRMALYMLY 461
Query: 325 QKVAYASDR 333
++ ++
Sbjct: 462 SRLGEVQNK 470
>gi|121710178|ref|XP_001272705.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119400855|gb|EAW11279.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 464
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 161/395 (40%), Gaps = 81/395 (20%)
Query: 3 TNESSYVPSPDVHGKR-STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQ 61
+ E+ + S HG R S+ P + D + +IR ++S+ A VIGKGG ++ +
Sbjct: 80 SGETQPIQSTASHGDRASSQPEQHRPQDESSW-IHIRAVISSQEAATVIGKGGENVSQIR 138
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK 121
SGA+ +S ++ G +RI+ +SG D + +A L+I L E D +K
Sbjct: 139 RLSGAKCTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTLNNE--PLDAPSTAQSK 193
Query: 122 T-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
T LRL++P+ GSIIGK G+ I+ + S A + S D +R + + G D
Sbjct: 194 TYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNAS--DACLPLSTERSLVILGVADS 251
Query: 181 QMRALELILLKLSED----------TLYS------------QTMTVPYT----------- 207
A + + L E + Y+ VPY
Sbjct: 252 VHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHP 311
Query: 208 --------YAGVFFSGFHGMP-----------------YGAVP--PPVPAVPHNTAAHYG 240
+ +G +G+P YGA P P A PH A +
Sbjct: 312 ETFKRHHPHPNRAAAGAYGVPYLHGQPAPAPVAQPALHYGATPHTPYAGAGPHQPAPYGA 371
Query: 241 PNMGGRKFQNNKDDRTNSLTIG--------VADEHIGFVVGRGGRNIMEISQISGARIKV 292
P + + G + ++ +G ++G+GG I EI +SG+ IK+
Sbjct: 372 PQPAQSRGAPTPATPAGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI 431
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
++ + ++ER VTI+G Q + A M+ ++
Sbjct: 432 NEPQE---NSNERLVTITGTQECNQMALYMLYSRL 463
>gi|58259741|ref|XP_567283.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134116752|ref|XP_773048.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255668|gb|EAL18401.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229333|gb|AAW45766.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 357
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 8/162 (4%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S+ P DP + +R L+ A +IG+GG+ +N+ + +S AR+ +S E P
Sbjct: 64 SSEPTAPAKPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVS---ESIP 120
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSII 137
G +RI+ +SG +D + +A L++ ++ E D G++ ++ I+PNS GS+I
Sbjct: 121 GNPERILNVSGPLDAVAKAFGLIVRRINDEPF--DVPSVPGSRAVTIKFIIPNSRMGSVI 178
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
GK G+ IK + S A + S + G +R+++++G D
Sbjct: 179 GKGGSKIKEIQEASGARLNAS--EAMLPGSTERVLSVSGVAD 218
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P + I+F++ N G+VIGKGGS I + Q SGAR L+ S PG+T+R++
Sbjct: 154 VPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGAR--LNASEAMLPGSTERVL 211
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK--------------------LR 125
+SG D + AV I +L E ++ G+ + +
Sbjct: 212 SVSGVADAVHIAV-YYIGTILLEYQDRYPSNATGSYKQSQSRGPPPNSNAPPPPGMQTQQ 270
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG-----LNDRLVTLTGTLDE 180
+ +PN+ G+IIG+ G+ I S I+++ + G +RLVT+TG D
Sbjct: 271 IFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDN 330
Query: 181 QMRALELILLKLSED 195
A+ L+ ++ +
Sbjct: 331 INAAVALLYSRVEAE 345
>gi|390347463|ref|XP_792931.3| PREDICTED: poly(rC)-binding protein 3-like [Strongylocentrotus
purpuratus]
Length = 369
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 106/255 (41%), Gaps = 52/255 (20%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRLIVP S CGS+IGK G+ IK + + A I ++ +R VT++GT + +
Sbjct: 20 LRLIVPTSQCGSLIGKGGSKIKDIRETTSASITVA--SEMLPSSTERAVTISGTPEAITK 77
Query: 184 ALELILLKLSEDTLYSQTMTVPY----TYAGVFFSG-----------------FHGMPYG 222
A+ + + E + T+PY A + F+G HG Y
Sbjct: 78 AIYQVCCVMLESP--PKGATIPYRPKPATAPIIFAGGSVSMTEQHLHQQQAYAVHGN-YA 134
Query: 223 AVPPPVPAVPHNTAAH---------------------YGPNMGGRKFQNNKDDRTNSLTI 261
P + + H A H + Q T +TI
Sbjct: 135 LAQPDLTKLHHQLALHHQQTPYAIPGQTPFSPAALTQFAAQTAAPPPQVQGQATTQEITI 194
Query: 262 GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAES 321
+ IG V+GRGG I EI Q+SGA IK+++ + G+++R VTI+G S+ A+
Sbjct: 195 --PNHLIGCVIGRGGTKIQEIRQMSGANIKIANSQE---GSTDRSVTITGSPESVAVAQC 249
Query: 322 MIMQKVAYASDRLMD 336
+I + A D
Sbjct: 250 LINTSLELAKGLTFD 264
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P P V G+ +T + N L G VIG+GG+ I + + SGA I+
Sbjct: 179 PPPQVQGQATTQ----------------EITIPNHLIGCVIGRGGTKIQEIRQMSGANIK 222
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
++ S E G+TDR + I+G+ + + A L+ L
Sbjct: 223 IANSQE---GSTDRSVTITGSPESVAVAQCLINTSL 255
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 21/188 (11%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D + +R ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 5 SKDDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIVT 59
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKA 140
ISG+ + I +A L+ K+ E E Q G LRLIVP S CGS+IGK
Sbjct: 60 ISGSTEAIYKAFSLICTKV--EEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKG 117
Query: 141 GATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
G IK + + A I+++ L S +R VTLTGT D + + I + E
Sbjct: 118 GNKIKEIREATGAQIQVASDVLPQS----TERAVTLTGTRDSITQCIFHICAVMVESP-- 171
Query: 199 SQTMTVPY 206
+ +T+PY
Sbjct: 172 PKGVTIPY 179
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 84/201 (41%), Gaps = 51/201 (25%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
DD LRLI+ GSIIGK G +K F ++S A I IS D S +R+VT++
Sbjct: 7 DDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINIS--DGS---CPERIVTIS 61
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
G+ + +A LI K+ E T G G GM
Sbjct: 62 GSTEAIYKAFSLICTKVEEFIEMQNGKT------GATAIGKCGM---------------- 99
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
+L + V G ++G+GG I EI + +GA+I+V+
Sbjct: 100 ----------------------TLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVAS- 136
Query: 296 GDFFSGTSERKVTISGPQRSI 316
D ++ER VT++G + SI
Sbjct: 137 -DVLPQSTERAVTLTGTRDSI 156
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF-FSGTSERKVTISGPQRSIRTAES 321
V ++ IG ++G+GG I EI QISGA I++S+ D S +++R +TI+G S+ A+
Sbjct: 320 VPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALAQY 379
Query: 322 MIMQKVAYASDRL 334
+I +++ + L
Sbjct: 380 LINMRISMETAGL 392
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMR 183
+ VPN G IIGK G I S A+I+IS D DR +T+TG D
Sbjct: 317 EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVAL 376
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
A LI +++S +T AG+ G+H
Sbjct: 377 AQYLINMRISMET------------AGLALPGYH 398
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 251 NKDDRTNSLTIGV--ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+KDD SLT+ + + +G ++G+ G + + SGA+I +SD ER VT
Sbjct: 5 SKDDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-----GSCPERIVT 59
Query: 309 ISGPQRSIRTAESMIMQKV 327
ISG +I A S+I KV
Sbjct: 60 ISGSTEAIYKAFSLICTKV 78
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF-FPGTTDRIIMISGTIDEILRAVD 99
V N L G +IGKGG+ I + + SGA I++S + +TDR I I+G D + A
Sbjct: 320 VPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALAQY 379
Query: 100 LV 101
L+
Sbjct: 380 LI 381
>gi|405120191|gb|AFR94962.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 365
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 160/365 (43%), Gaps = 68/365 (18%)
Query: 9 VPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARI 68
+PSPD G E +R LVS AG +IGK G+TI + +G +
Sbjct: 19 LPSPDAQG--------------AEHQLSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKA 64
Query: 69 QLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA---DDVGTKTKLR 125
+S+ G DR++ ++G ++ + A V +LL E D + VG+ T +R
Sbjct: 65 GVSK---VVQGVQDRVLSVTGDLEGVASAYAEVA-RLLLETPLSDSSLPPPPVGSFTSIR 120
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMR 183
L++ ++ G++IG++G IK D S A + S+ L S +R+V + G++D
Sbjct: 121 LLISHNLMGTVIGRSGLKIKQIQDMSGARMVASKEMLPQS----TERVVEVQGSVDAIKT 176
Query: 184 ALELILLKLSEDT-----------------------LYSQTMT-----VPYTYAGVFFSG 215
A+ I L ED L +Q +T + T F G
Sbjct: 177 AVLEIGKCLLEDWDRGAGTVLYHPGAAGDAGVLAGGLGAQAVTGSTGGIRRTSVAAGFGG 236
Query: 216 FHG--MPY--GAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFV 271
+ G P G++ + P + P+ G + N+ + RT +++I + +G +
Sbjct: 237 YSGDRRPSRGGSI-----SGPSGVSGERRPSEGPQVNLNDPNLRTQNISI--PSDMVGCI 289
Query: 272 VGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYAS 331
+GRGG I EI ++SG+RI ++ T ER TI G + A ++ ++
Sbjct: 290 IGRGGSKITEIRRLSGSRISIAKV--PHDETGERMFTIQGTPEATERALMLLYSQLESEK 347
Query: 332 DRLMD 336
+R ++
Sbjct: 348 ERRVN 352
>gi|395334662|gb|EJF67038.1| cytoplasmic protein [Dichomitus squalens LYAD-421 SS1]
Length = 327
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 30/283 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGK G + + + Q+G + +S+ PG +R++ ++G+++ + +
Sbjct: 31 LRALVSTKDAGVIIGKAGKNVAELREQTGVKAGVSK---VIPGVHERVLTVTGSVEGVAK 87
Query: 97 AVDLVIDKLLT-ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ +L++ + ++ T +RL++ ++ GS+IG+ G IK+ D S A +
Sbjct: 88 AYSLIVSQLVSANPSSPVTSNSSSPTTAIRLLISHNLMGSVIGRNGLKIKAIQDSSGARM 147
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
S+ L S +R+V + G+ + RA+E I L ED + + G
Sbjct: 148 VASKDMLPQS----TERIVEVQGSSESIGRAIEEIGRCLLEDWERGVGTVLFHPGTGDER 203
Query: 214 SGFHGMPYGAVPP-----PVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHI 268
SG P G P++ ++ G N+ + QN I + + +
Sbjct: 204 SGRRTHPTGRRANGDGRGRTSPSPNSPSSPQGTNL---RTQN----------ISIPSDMV 250
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
G ++GR G I EI ++SG++I ++ + T ER TI G
Sbjct: 251 GCIIGRNGTKITEIRRLSGSKISIAK--EPHDETGERMFTIVG 291
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T IR L+S+ L G+VIG+ G I Q SGAR+ S+ + P +T+RI+ + G+ + I
Sbjct: 114 TAIRLLISHNLMGSVIGRNGLKIKAIQDSSGARMVASK--DMLPQSTERIVEVQGSSESI 171
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGT---------------------------------- 120
RA++ + LL ED VGT
Sbjct: 172 GRAIEEIGRCLL-----EDWERGVGTVLFHPGTGDERSGRRTHPTGRRANGDGRGRTSPS 226
Query: 121 --------KTKLR---LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
T LR + +P+ G IIG+ G I S + I I++ H G +
Sbjct: 227 PNSPSSPQGTNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETG--E 284
Query: 170 RLVTLTGTLDEQMRALELILLKLSED 195
R+ T+ GT + +AL L+ +L +
Sbjct: 285 RMFTIVGTPEANEKALFLLYNQLESE 310
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEAEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 367 YPHHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 403
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 404 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 453
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKL-----------------LTELHAEDQ------ADDVGTKTKLRLIVPNSSC 133
A ++ KL + L+ Q + + L +P +
Sbjct: 337 AEAEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE+ IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACASAEAEIMKKLREAFENDML 354
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|449304748|gb|EMD00755.1| hypothetical protein BAUCODRAFT_60994 [Baudoinia compniacensis UAMH
10762]
Length = 333
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 30/296 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V++ AG +IGK G + + + ++G R +S+ PG DR++ ++G + I
Sbjct: 20 LRAIVTSKEAGVIIGKAGQNVAELRDKTGVRAGVSK---VVPGVHDRVLTVTGPLTGISE 76
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A LV D L+ V +RL++ ++ G+IIG+ G IK D S +
Sbjct: 77 AYGLVADGLVKGAPQMGMGGVVANPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 136
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVP 205
V + L S +R+V + GT D +A+ I L +D LYS + V
Sbjct: 137 MVAQKEMLPQS----TERIVEIQGTPDGVQKAVWEIGKCLIDDQERGYGTVLYSPAVRVQ 192
Query: 206 YTYAGVFFSGF-HGMPYGAVPPPVPAVPHNTAAHY-----GPNMGGR--KFQNNKDDRTN 257
+G +G P G A + A Y GP+ G ++ +D +T
Sbjct: 193 GAAPTPAMNGTGYGAPRGYNRTGNGADFTGSGAPYQRRSTGPSDTGPPPAVEDGEDIQTQ 252
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+++I + +G ++GRGG I EI + SGARI ++ T ER TI+G Q
Sbjct: 253 NISI--PADMVGCIIGRGGSKISEIRKSSGARISIAK--APHDDTGERMFTITGGQ 304
>gi|212275119|ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
gi|413936737|gb|AFW71288.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 120/280 (42%), Gaps = 46/280 (16%)
Query: 15 HGKRSTAPVKSLSSDPT-----EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
HG S P+ S SS P + T + + N G +IGK G TI Q QSGA+IQ
Sbjct: 118 HGA-SIPPLSSQSSAPQYSYGGHQGTSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQ 176
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHA----------EDQADDVG 119
++R HE PG R + +SG ++I +A L I +++ E A + A G
Sbjct: 177 VTRDHEAEPGALTRQVELSGNPEQISKAEQL-IKEVIAEADAGSSGAVSGGRKYNAPQPG 235
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-----DHSYYGLNDRLVTL 174
+T ++ + N+ G IIGK G TIKS S A I++ L D S +R V +
Sbjct: 236 AET-FQMKIANNKVGLIIGKGGETIKSMQAKSGARIQVIPLHLPAGDTS----TERTVHI 290
Query: 175 TGTLDEQMRALELILLKLSEDTL-------YSQTMTVP--------YTYAGVFFSGFHGM 219
GT ++ A +L+ SE+ YSQ P A SG+ M
Sbjct: 291 DGTQEQIEHAKQLVAEVTSENRARNPMSGGYSQQGYHPPRPQSNWGPPSAPPQQSGYGYM 350
Query: 220 PYGAVP--PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN 257
GA P PP P Y P GG +Q D N
Sbjct: 351 QPGAYPGAPPQYGAPQQPYGSYPPTSGG--YQTGWDQSQN 388
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 47/208 (22%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T ++ +PN G IIGKAG TI+ S A I+++R + G R V L+G ++
Sbjct: 142 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGNPEQI 201
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
+A +LI ++E S GAV
Sbjct: 202 SKAEQLIKEVIAEADAGSS---------------------GAV----------------- 223
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV----SDRGD 297
GGRK+ N + + +A+ +G ++G+GG I + SGARI+V GD
Sbjct: 224 -SGGRKY-NAPQPGAETFQMKIANNKVGLIIGKGGETIKSMQAKSGARIQVIPLHLPAGD 281
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQ 325
++ER V I G Q I A+ ++ +
Sbjct: 282 T---STERTVHIDGTQEQIEHAKQLVAE 306
>gi|358379880|gb|EHK17559.1| hypothetical protein TRIVIDRAFT_231881 [Trichoderma virens Gv29-8]
Length = 477
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 117 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGIVDAVA 173
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E ++A +KT LRL++P+ GSIIGK G+ I+ + S A
Sbjct: 174 KAFGLIIRTLNNE--PLNEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGAR 231
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 232 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNERFGGPAASAYA 284
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P + HYG
Sbjct: 285 TRSGAPVGSIPGGMQVVPYSPQPASGHYG 313
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 134/320 (41%), Gaps = 65/320 (20%)
Query: 35 TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
TY +R L+ + L G++IGKGGS I + Q SGAR+ S S P +++R +++ G D
Sbjct: 198 TYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDS--CLPMSSERSLVVMGVADA 255
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+ A V LL +L+ R P +S + ++GA + S Q
Sbjct: 256 VHIATYYVGSTLLEQLNE-------------RFGGPAASAYAT--RSGAPVGSIPGGMQV 300
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
V + +YG + ++ R + +
Sbjct: 301 VPYSPQPASGHYGRAENY-----GRHQERRPHHMPPAPYPQPY----------------- 338
Query: 214 SGFHGMPYGAVPPPV---------------PAVPHNTAAHYGPNMGGR---KFQNNKDDR 255
HG P+GA P+ P V + A H GP G + +
Sbjct: 339 --PHGAPHGAPAIPMQYGAGQPAAAYGAAAPHVQPHMAPHTGPQPHGAPQGQPMHAGMPG 396
Query: 256 TNSLT--IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
T +T I + ++ +G ++G+GG+ I EI Q+SG+ IK+++ D ++ER VTI+G +
Sbjct: 397 TGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQD---NSNERLVTITGTE 453
Query: 314 RSIRTAESMIMQKVAYASDR 333
R A M+ ++ +R
Sbjct: 454 ECNRMALYMLYSRLGETQNR 473
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P HG P+ + P P + + N + GA+IGKGG IN+ + SG+ I+++
Sbjct: 379 PQPHGAPQGQPMHA--GMPGTGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKIN 436
Query: 72 RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ + +R++ I+GT + A+ ++ +L
Sbjct: 437 EPQD---NSNERLVTITGTEECNRMALYMLYSRL 467
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 190
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 191 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 246
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 247 ISSLQDLSIYN-PERTITVKGTVEACANAEVEIMKKLRE--AFENDMLAVNTHSGYFSSL 303
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 304 YPPHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 340
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 341 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 390
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 214 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAN 273
Query: 97 AVDLVIDKL-----------------LTELHAEDQ------ADDVGTKTKLRLIVPNSSC 133
A ++ KL + L+ Q + + L +P +
Sbjct: 274 AEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAV 333
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 334 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 391
Query: 194 EDTLYS 199
E+ ++
Sbjct: 392 EENFFN 397
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 190
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ + P+ + HN
Sbjct: 191 ACRMILEIMQKEADETKLAEEI------------------------PLKILAHNGL---- 222
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 223 ---------------------------VGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 255
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 256 YNPERTITVKGTVEACANAEVEIMKKLREAFENDML 291
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 324 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 381
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 382 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 438
Query: 157 ISR 159
+ R
Sbjct: 439 VPR 441
>gi|169617928|ref|XP_001802378.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
gi|111059439|gb|EAT80559.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
Length = 485
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 146/362 (40%), Gaps = 79/362 (21%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R + A +IGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 128 HLRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVS 184
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L++ + L + E + +RL++P+ GSIIGKAG I+ + S A
Sbjct: 185 KAFGLIV-RTLNQEDLEAPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNA-- 241
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTY 208
K++ D +R + + G D A+ + L E SQ T
Sbjct: 242 KLNASDTLLPNSGERSLVVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 301
Query: 209 AGVFFSGFHGMP-----------------------------YGAVP-----PPV------ 228
A V G P YGA P PV
Sbjct: 302 ANVVPGGMSVQPYVPQPAGGQYQQPNNFRRQEPQRTPAHGGYGAAPHMQPGAPVHPSPYG 361
Query: 229 -PAVPHNTA----AHYG--PNM--------------GGRKFQNNKDDRTNSLT--IGVAD 265
P +P+ AHYG P GG Q LT I + +
Sbjct: 362 QPQMPYGAGSPGRAHYGGPPQQPGPYGAPQGAPVPHGGPPNQPPVSMPGQPLTQQIFIPN 421
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+GG I EI Q+SG+ IK+++ D ++ER VTI+G Q + A M+
Sbjct: 422 DMVGAIIGKGGAKINEIRQLSGSVIKINEPTD---NSNERLVTITGTQECNQMALYMLYS 478
Query: 326 KV 327
++
Sbjct: 479 RL 480
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 410 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNS----NERLVTITGT 465
Query: 178 LDEQMRALELILLKLSE 194
+ AL ++ +L E
Sbjct: 466 QECNQMALYMLYSRLGE 482
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
+P HG P S+ P + + + N + GA+IGKGG+ IN+ + SG+ I++
Sbjct: 393 APVPHGGPPNQPPVSMPGQPLTQ----QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI 448
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ + + +R++ I+GT + A+ ++ +L
Sbjct: 449 NEPTD---NSNERLVTITGTQECNQMALYMLYSRL 480
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 245 GRKFQNNKD-DRTNSLTI--GVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
GR +++ D TN L + + ++G+GG N+ +I ++SGA+ VS D+ G
Sbjct: 112 GRPLSHSQQVDETNWLHLRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRG 168
Query: 302 TSERKVTISGPQRSIRTAESMIMQKV 327
ER +T+SG ++ A +I++ +
Sbjct: 169 AVERILTVSGQVDAVSKAFGLIVRTL 194
>gi|255943089|ref|XP_002562313.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587046|emb|CAP94706.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 143/323 (44%), Gaps = 38/323 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ PG DR++ ++G + + R
Sbjct: 49 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVPGVHDRVLTVTGQLRSLAR 105
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A +V LL ++ + GT +RL++ ++ G+IIG+ G IK D S
Sbjct: 106 AYAIVAKGLLEGAPQMGMGGIVSNNGTH-PVRLLISHNQMGTIIGRQGLKIKHIQDASGV 164
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGV 211
+ V + L S +R+V + GT + +A+ I L +D T TV Y A V
Sbjct: 165 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAIWEIGKCLLDD-WQRGTGTVLYNPA-V 218
Query: 212 FFSGFHGMPYGAVPPPVPAVPHNTAA-HYGPNMGGRKFQNNK-DDRTNS----------- 258
S P PP +NT++ Y G F + + R+NS
Sbjct: 219 RASLSGSQPLNNNPPAGNGYQNNTSSRQYNRTGNGADFSDGGYNRRSNSDAGNRGYPLVT 278
Query: 259 --------LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
I + + +G ++GRGG I EI + SGARI ++ T ER TI
Sbjct: 279 EDGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKA--PHDETGERMFTIM 336
Query: 311 GPQRSIRTAESMIMQKVAYASDR 333
G ++ A ++ + + R
Sbjct: 337 GSAQANEKALYLLYENLEAEKTR 359
>gi|453231918|ref|NP_001263701.1| Protein M88.5, isoform d [Caenorhabditis elegans]
gi|413000918|emb|CCO25663.1| Protein M88.5, isoform d [Caenorhabditis elegans]
Length = 730
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 128/292 (43%), Gaps = 38/292 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARI---QLSRSHEFFPGTTDRIIMISGTIDE 93
IR +V +IG GSTI D S + R+ LS+ G DRI+ + G ++
Sbjct: 189 IRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDFVNLSKKERTVLGNNDRILTVHGVAEQ 248
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++D + +E +D +VG T LR+ N CG +IGKAG++IK M +
Sbjct: 249 ATKAVARILDVIQSEAVKDDV--NVGADTVLRMRAHNQLCGRLIGKAGSSIKEIMQKTGT 306
Query: 154 VIKISRL-----------DHSYYGLNDRLVTLTG-TLDEQMRALELILLKL-----SEDT 196
I +++ + GL +R + + G +++ ++A LI KL S+
Sbjct: 307 NITVTKYIEPPGGISGLTANELLGLMERTIMVRGPSIEAVVQAEALISAKLKKCYESDSQ 366
Query: 197 LYSQTMTVPYTYAGVFFSGFHGMPYGAVPPP--------VPAVPHNTAAHY--GPNMGGR 246
L +Q+M P + G AV P V V H ++ + N
Sbjct: 367 LRAQSMQCPMPPMMMPPILPPGASSSAVSAPHFIPTPVGVMQVQHFASSQHLVHQNANNS 426
Query: 247 KFQNN----KDDRTN--SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
Q + TN + + V D IG ++G G+NI I + +GA +K+
Sbjct: 427 FLQPGVLQIQPGTTNLRQVRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKI 478
>gi|302916853|ref|XP_003052237.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733176|gb|EEU46524.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 37/311 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G D I R
Sbjct: 50 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGGCDAISR 106
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL A V + ++L++ ++ G+IIG+ G IK D S +
Sbjct: 107 AYAIVARALLEGAPAMGMGGIVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVR 166
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYS---QTM 202
V + L S +R+V + GT + RA+ I L +D LY+ +T
Sbjct: 167 MVAQKEMLPQS----TERIVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRTQ 222
Query: 203 TVPYTYAGVFFSGF--------HGMPY------GAVPPPVPAVPHNTAAHYGPNMGGRKF 248
T G +G+ +G P GA + P+N + + G
Sbjct: 223 PASSTSVGSGGAGYSQGSGRSEYGSPRVMRTGNGADFSNGSSRPYNRRSDSDAAIRGPPT 282
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + + I + + +G ++GR G I EI + SGARI ++ T ER T
Sbjct: 283 HDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA--PHDETGERMFT 340
Query: 309 ISGPQRSIRTA 319
I G ++ +A
Sbjct: 341 IMGTAKANESA 351
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 128 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 185
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 186 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 241
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 242 ISSLQDLSIYN-PERTITVKGTVEACANAEVEIMKKLRE--AFENDMLAVNTHSGYFSSL 298
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 299 YPPHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 335
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 336 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 385
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 209 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAN 268
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 269 AEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAV 328
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 329 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 386
Query: 194 EDTLYS 199
E+ ++
Sbjct: 387 EENFFN 392
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 128 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 185
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 186 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 216
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 217 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 250
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 251 YNPERTITVKGTVEACANAEVEIMKKLREAFENDML 286
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 319 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 376
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 377 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 433
Query: 157 ISR 159
+ R
Sbjct: 434 VPR 436
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV GAVIG+ G I +S ARI++ + PG DR +MIS
Sbjct: 115 SVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVL---DGPPGVPDRAVMISAKDEPD 171
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+D +LR + D L E +A GT RL+VP S GS+IGK GATI
Sbjct: 172 APLPPAVDGLLRVHKRITDGLDGESDQPQRA--AGTVGPTRLLVPASQAGSLIGKQGATI 229
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
KS D S+ V++I +DR+V + G + +A+ELI L
Sbjct: 230 KSIQDASKCVLRILESVPPVALSDDRVVEIQGEPLDVHKAVELIASHL 277
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 79/167 (47%), Gaps = 17/167 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
R LV GAVIG+ G I +S ARI++ E P +R +MIS
Sbjct: 109 FRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVL---EGPPAVPERAVMISAKDEPDTE 165
Query: 90 ---TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIK 145
+D +LR + D L TE DQ T RL+VP S GS+IGK GATIK
Sbjct: 166 LPPAVDGLLRVHRRITDGLETET---DQPQRATVNTGPTRLLVPASQAGSLIGKQGATIK 222
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
S D S+ V++I +DR+V + G + +A+ELI L
Sbjct: 223 SIQDASKCVLRIVENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 79/167 (47%), Gaps = 17/167 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
R LV GAVIG+ G I +S ARI++ E P +R +MIS
Sbjct: 109 FRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVL---EGPPAVPERAVMISAKDEPDTE 165
Query: 90 ---TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIK 145
+D +LR + D L TE DQ T RL+VP S GS+IGK GATIK
Sbjct: 166 LPPAVDGLLRVHRRITDGLETET---DQPQRATVNTGPTRLLVPASQAGSLIGKQGATIK 222
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
S D S+ V++I +DR+V + G + +A+ELI L
Sbjct: 223 SIQDASKCVLRIVENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 148/344 (43%), Gaps = 46/344 (13%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R SS P + +R LV GA+IGK
Sbjct: 140 SYIPDEEVSSPPPPQRSRRGGHASREQGSSPGGSSQPKQLDFPLRMLVPTQFVGAIIGKE 199
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +++ + R G ++ I I T + A +++D + E
Sbjct: 200 GLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSEACRMILDIMQKEADETK 257
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLV 172
A+++ L+++ NS G +IGK G +K D+ I IS L D + Y +R +
Sbjct: 258 SAEEI----PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYN-PERTI 312
Query: 173 TLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGA 223
T+ G+ + A I+ KL E + Q +P + G+F +G +P A
Sbjct: 313 TVKGSTEACSNAEVEIMKKLREAYENDIVAVNQQANLIPGLNLSALGIFSTGLSMLPSSA 372
Query: 224 VPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
A AA Y P F + + N + + + +G ++G+ G++I +++
Sbjct: 373 G-----ARGAAAAAPYHP------FALPEQEVVN---LFIPTQAVGAIIGKKGQHIKQLA 418
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ +GA IK++ +ER V I+GP + A+ I K+
Sbjct: 419 RFAGASIKIAPAEG--PDATERMVIITGPPEAQFKAQGRIFGKL 460
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TIK+ +Q+ + I R +++ G ++ +T+ T +
Sbjct: 183 LRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSE 240
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL + ++ +++ +P AH
Sbjct: 241 ACRMILDIMQKEADETKSAE--------------------------EIPLKILAH----- 269
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NSL +G ++G+ GRN+ +I Q +G +I +S D
Sbjct: 270 -------------NSL--------VGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNP 308
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+K+ AY +D
Sbjct: 309 ERTITVKGSTEACSNAEVEIMKKLREAYEND 339
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G I +GA I+++ + P T+R+++I+G + +
Sbjct: 394 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAE--GPDATERMVIITGPPEAQFK 451
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + K + + VP+ + G +IGK G T+ + + A +
Sbjct: 452 AQGRIFGKLKEENFFNPKEE---VKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVI 508
Query: 157 ISR 159
+ R
Sbjct: 509 VPR 511
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 47/207 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + +G +I +S + +R I + G+ +
Sbjct: 264 LKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTITVKGSTEACSN 323
Query: 97 AVDLVIDKLLTELHAED------QAD---------------------------------- 116
A ++ I K L E + D QA+
Sbjct: 324 A-EVEIMKKLREAYENDIVAVNQQANLIPGLNLSALGIFSTGLSMLPSSAGARGAAAAAP 382
Query: 117 ----DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ + + L +P + G+IIGK G IK + A IKI+ + +R+V
Sbjct: 383 YHPFALPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGP--DATERMV 440
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
+TG + Q +A I KL E+ ++
Sbjct: 441 IITGPPEAQFKAQGRIFGKLKEENFFN 467
>gi|340914749|gb|EGS18090.1| putative pab1-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 484
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG + + SGAR +S ++ G +RI+ +SG +D +
Sbjct: 126 HIRAVISSPEAATIIGKGGENVTKIRQMSGARCTVS---DYQKGAVERILTVSGIVDAVA 182
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E ++ + +KT LRL++P+ GSIIGK GA IK + S A
Sbjct: 183 KAFGLIIRTLNNE--PLNEPSNQHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGAR 240
Query: 155 IKIS 158
+ S
Sbjct: 241 LNAS 244
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 56/332 (16%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 189 IRTLNNEPLNEPSNQHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDS-- 246
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
P +T+R +++ G D + A V LL +L N G
Sbjct: 247 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQL--------------------NERFGG 286
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
A AT +S + + ++ G D RA
Sbjct: 287 AAASAYAT-RSGGPVGAVPGGMQVIPYNPQPAGGHY----GNRDAYYRARPDPRAHHMPP 341
Query: 196 TLYSQTMTVPYTYAGVFFSGFHGMP--YGAVPP----PVPAV--PH--NTAAHYGPNMG- 244
Y+Q PY + MP YGA P P P V PH + AAH P++G
Sbjct: 342 PPYAQ----PYGHPAHPVHPAAAMPMHYGATPAAGYGPAPHVQPPHVGHPAAH--PHVGP 395
Query: 245 -GRKFQN-NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
G+ + +T + I + ++ +G ++G+GG+ I EI QISG+ IK+++ D +
Sbjct: 396 HGQPVAGAHMPGQTITQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NS 452
Query: 303 SERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
+ER VTI+G + R A M+ ++ R+
Sbjct: 453 NERLVTITGTEECNRMALYMLYSRLENEKHRI 484
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
++G+GG N+ +I Q+SGAR VS D+ G ER +T+SG
Sbjct: 139 IIGKGGENVTKIRQMSGARCTVS---DYQKGAVERILTVSG 176
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 146/347 (42%), Gaps = 48/347 (13%)
Query: 14 VHGKRSTAPVKSLSSDPTEK-PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
VH S A L SD K R LV + + +IGK G+TI +S++ A I+++
Sbjct: 120 VHSAISNAVSSVLDSDRKMKDKEECRILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTP 179
Query: 73 SHEFFPGTT-----DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLI 127
P + D IM + + AV+ + LL + D+ DD +RL+
Sbjct: 180 KDASDPTHSCAMDFDNFIMSPDDLKSM--AVEAI---LLLQGKINDEDDDT---VSIRLL 231
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG-LNDRLVTLTGTLDEQMRALE 186
VP G IIGK+G+ I ++A I+IS+ +D LV + G + AL
Sbjct: 232 VPCKVIGCIIGKSGSIINEIRRRTKADIRISKGQKPKCADSSDELVEVLGEVGSVRDALV 291
Query: 187 LILLKLSEDTLYSQTMT-VPYTYAGVFFSGFHGMP----YGAVPPPVP------------ 229
I+L+L +D L + + P A +SG G+ +VPP P
Sbjct: 292 QIVLRLRDDALKEKDGSHNPSVGADPLYSGGSGISVPSLLSSVPPVTPLAYDQRPETGSG 351
Query: 230 ---AVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIG----------VADEHIGFVVGRGG 276
N + MG + + ++ L G V +G V+G+GG
Sbjct: 352 LGLLSSSNLYGYGSLTMGDNGYDSMSSYSSSKLYGGLPPPSTLEMLVPANAVGKVLGKGG 411
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
NI I +ISGA I++S D S +R ISG R AE++I
Sbjct: 412 ANIANIRKISGAMIEIS---DAKSARGDRIAHISGTPEQKRAAENLI 455
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 28/148 (18%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI---------- 87
R L + + G+VIGK G IN + ++ A++++ + FPG DR+I I
Sbjct: 42 RILCPDEVIGSVIGKNGKVINSIRQETRAKVKVV---DPFPGPNDRVITIYCYVKKKEDV 98
Query: 88 ------------SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
D +LR + + + + L ++ + D K + R++VP+S +
Sbjct: 99 ELDDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDSDRKMKD---KEECRILVPSSQSAN 155
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHS 163
IIGKAG TIK ++A IK++ D S
Sbjct: 156 IIGKAGTTIKKLRSKTRATIKVTPKDAS 183
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 238 HYGPNMGGRKFQNNKDDRTN-----SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
H G N ++ N+KD+R N + I DE IG V+G+ G+ I I Q + A++KV
Sbjct: 15 HDGDNKNQKRRVNDKDERGNNDELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKV 74
Query: 293 SDRGDFFSGTSERKVTI 309
D F G ++R +TI
Sbjct: 75 VDP---FPGPNDRVITI 88
>gi|322707130|gb|EFY98709.1| KH domain RNA-binding protein [Metarhizium anisopliae ARSEF 23]
Length = 368
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 133/311 (42%), Gaps = 41/311 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G D I R
Sbjct: 49 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGECDAISR 105
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL A V + ++L++ ++ G+IIG+ G IK D S +
Sbjct: 106 AYAIVARALLEGAPAMGMGGIVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVR 165
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY-----T 207
V + L S +R+V + GT D RA+ I L +D T TV Y T
Sbjct: 166 MVAQKEMLPQS----TERIVEVQGTPDGIQRAVWEICKCLVDD-WQRGTGTVLYNPVVRT 220
Query: 208 YAGVFFSGFHGMPY----GAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD---------- 253
AG SG G Y G P V N G R F D
Sbjct: 221 QAG---SGSLGSNYNNGGGRSDYGSPRVMRTGNGADFSNGGVRPFSRRSDSDAASRGPPT 277
Query: 254 -----DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + I + + +G ++GR G I EI + SGARI ++ T ER T
Sbjct: 278 HDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA--PHDETGERMFT 335
Query: 309 ISGPQRSIRTA 319
I G ++ +A
Sbjct: 336 IMGTAKANESA 346
>gi|388854780|emb|CCF51673.1| related to PBP2-PAB1 binding protein [Ustilago hordei]
Length = 446
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGK G IN+ + +S AR+ +S E PG +RI+ +SG +D + +
Sbjct: 142 MRTLIVTSDASIIIGKSGKHINEIRDKSNARLNIS---EIIPGNPERILTVSGPLDAVSK 198
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ ++ E DQ G+K+ +R IVPNS GS+IGK G+ IK + S A
Sbjct: 199 AFGLIVRRINDEPF--DQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGA-- 254
Query: 156 KISRLDHSYYGLNDRLVTLTGTLD 179
+++ + G +R+++++G D
Sbjct: 255 RLTAGEAMLPGSTERVLSISGVAD 278
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P K IRF+V N G+VIGK GS I + Q SGAR L+ PG+T+R++ ISG
Sbjct: 218 PGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGAR--LTAGEAMLPGSTERVLSISG 275
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDV 118
D + AV V LL H + A+++
Sbjct: 276 VADAVHIAVYYVGTILLE--HQDRNANNL 302
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 58/201 (28%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D ++ T+ +R ++ S IIGK+G I D S A + IS + G +R++
Sbjct: 131 DSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEI---IPGNPERIL 187
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T++G LD +A LI+ +++++ P+ P+VP
Sbjct: 188 TVSGPLDAVSKAFGLIVRRINDE---------PFDQ--------------------PSVP 218
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIG--VADEHIGFVVGRGGRNIMEISQISGARI 290
+ S+TI V + +G V+G+ G I EI + SGAR+
Sbjct: 219 G----------------------SKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARL 256
Query: 291 KVSDRGDFFSGTSERKVTISG 311
+ G++ER ++ISG
Sbjct: 257 TAGEA--MLPGSTERVLSISG 275
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL---SRSHEFFPGTTDRIIMISGTIDEI 94
+ + N L G +IGKGGS IN+ +S S ++I++ G +R++ I+G I
Sbjct: 363 QIFIPNDLVGCIIGKGGSKINEIRSMSASQIKIMEPGAGIAAGGGGNERLVTITGPPPNI 422
Query: 95 LRAVDLVIDKLLTE 108
AV L+ +L E
Sbjct: 423 QMAVSLLYQRLEQE 436
>gi|432881653|ref|XP_004073885.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like isoform 1 [Oryzias latipes]
Length = 585
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 153/347 (44%), Gaps = 48/347 (13%)
Query: 7 SYVP-------SPDVHGKR---STAPVKSLSSDPTEKPTY-----IRFLVSNPLAGAVIG 51
SY+P P V G+R + P +S S +P +R LV GA+IG
Sbjct: 152 SYIPDETAAPEGPGVGGRRGFNARGPPRSGSPGMGARPKVQSDIPLRVLVPTQFVGAIIG 211
Query: 52 KGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHA 111
K G+TI + Q+ ++I + R G ++ I I T + +A +++ + E
Sbjct: 212 KEGATIRNITKQTHSKIDIHRKEN--AGAAEKPITIHSTPEGCSKACTTIMEIMQKEALD 269
Query: 112 EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDR 170
+++ L+++ N+ G +IGK G +K D+ I IS L D + Y +R
Sbjct: 270 TKFTEEI----PLKILAHNNFVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTLYN-PER 324
Query: 171 LVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YTYAGVFFSGFHGM-P 220
+T+ G+++ RA E ++ K+ E + Q+ +P G+F SG GM P
Sbjct: 325 TITVKGSIEACSRAEEEVMKKVREAYESDMAAMNLQSNLIPGLNLNALGLFPSGTPGMGP 384
Query: 221 YGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIM 280
+ PP + AH G + F + T L I +G ++G+ G++I
Sbjct: 385 SMSNFPP-------SGAHGGCS----SFGGQPESETVHLFIPALA--VGAIIGKQGQHIK 431
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
++S +GA IK++ +R V I GP + A+ I K+
Sbjct: 432 QLSHFAGASIKIAPAEGM--DAKQRMVIIVGPPEAQFKAQCRIFGKL 476
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK GATI++ + + I I R +++ G ++ +T+ T + +
Sbjct: 197 LRVLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENA--GAAEKPITIHSTPEGCSK 254
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A I+ + + + + +T +P AH
Sbjct: 255 ACTTIM-----EIMQKEALDTKFTEE---------------------IPLKILAH----- 283
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ +I Q +G +I +S D
Sbjct: 284 ------NN---------------FVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTLYNP 322
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE +M+KV AY SD
Sbjct: 323 ERTITVKGSIEACSRAEEEVMKKVREAYESD 353
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + R+++I G + +A + KL
Sbjct: 420 GAIIGKQGQHIKQLSHFAGASIKIAPAEGM--DAKQRMVIIVGPPEAQFKAQCRIFGKLK 477
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + G K +++L VP+ + G +IGK G T+ + + A + + R
Sbjct: 478 EE-------NFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPR 527
>gi|402886179|ref|XP_003906515.1| PREDICTED: poly(rC)-binding protein 2 [Papio anubis]
Length = 340
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + ++A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIREVTEAA 130
Query: 155 IK 156
+K
Sbjct: 131 LK 132
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + G + +T S + + ++ IG ++GR G I EI Q+SGA+IK+++
Sbjct: 247 PEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP---VE 303
Query: 301 GTSERKVTISGPQRSIRTAESMI 323
G+++R+VTI+G SI A+ +I
Sbjct: 304 GSTDRQVTITGSAASISLAQYLI 326
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 51/168 (30%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A I IS + +R++TL G + +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I+ KL ED S T + A PPV
Sbjct: 71 AFAMIIDKLEEDISSSMTNST-----------------AASRPPV--------------- 98
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIK 291
+L + V G ++G+GG I EI +++ A +K
Sbjct: 99 --------------TLRLVVPASQCGSLIGKGGCKIKEIREVTEAALK 132
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 257 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 313
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 314 GSAASISLAQYLINVRLSSE 333
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 257 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 313
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 314 GSAASISLAQYLINVRLSSET 334
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>gi|254566093|ref|XP_002490157.1| RNA binding protein with similarity to hnRNP-K that localizes to
the cytoplasm and subtelomeric DNA [Komagataella
pastoris GS115]
gi|238029953|emb|CAY67876.1| RNA binding protein with similarity to hnRNP-K that localizes to
the cytoplasm and subtelomeric DNA [Komagataella
pastoris GS115]
gi|328350558|emb|CCA36958.1| RNA-binding protein rnc1 [Komagataella pastoris CBS 7435]
Length = 379
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 45/307 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
RFLVS AG +IGK GS I + + +S E G DRI+ ISG+++ + RA
Sbjct: 103 RFLVSKREAGTIIGKEGSCITSIRMGCDVKAGVS---ELVRGCVDRILTISGSVENVGRA 159
Query: 98 VDLVIDKLLTELHAEDQAD-------DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
V + ++L + A Q D V T++RL++PN+ G++IGK G I++
Sbjct: 160 VGR-LAQVLVDTAAFSQLDFAPSGGTSVMGVTRIRLLIPNTQMGALIGKRGIRIRALQQY 218
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
+K+ +R+V + GT A I L ED + T+ Y A
Sbjct: 219 HS--VKMVASKDPLANSTERVVEVQGTPLAIESAAVTISKCLLEDFMLPAADTIYYVSA- 275
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYG----PNMGGRKFQNNKDDRTNSLTIGVADE 266
PP A YG G ++ T++ T+ E
Sbjct: 276 --------------PP----------AGYGGAARATTGDSFLNSDSLGPTSTETVYFPGE 311
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+G ++G+ G I EI ++SG I + D + G ER+ ++GP R++ A +M+
Sbjct: 312 LVGAIIGKRGVRIQEIRKLSGCAISI-DSANTTGG--ERRFVLTGPVRNVDRALAMLTGL 368
Query: 327 VAYASDR 333
V R
Sbjct: 369 VEREKSR 375
>gi|260941532|ref|XP_002614932.1| hypothetical protein CLUG_04947 [Clavispora lusitaniae ATCC 42720]
gi|238851355|gb|EEQ40819.1| hypothetical protein CLUG_04947 [Clavispora lusitaniae ATCC 42720]
Length = 370
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 69/319 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
R LVS AG +IG+ G+ I+ + ++ R +S + PGT +RI+ +SG +D +
Sbjct: 19 FRVLVSAKEAGCLIGQNGAVIDSIRDETATRAGIS---QLRPGTHERILTVSGLVDSAAK 75
Query: 97 AVDLVIDKLLTE------------LHAEDQADDV-GTKTKLRLIVPNSSCGSIIGKAGAT 143
A+ L+ L + +V G T LR++VPNS G++IG G
Sbjct: 76 ALSYFAQALVNASSETPFSYSYFPLKQMSRIANVEGQTTVLRMMVPNSQIGTLIGARGLR 135
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL------SEDTL 197
I+ + +S+ G ++RLV L GT+D A+ ++ L SE+T+
Sbjct: 136 IQQIQRQCNVSMIVSK--SFLAGSSERLVELQGTVDNLYDAVRIVGRCLLSGASSSEETV 193
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN 257
+ VP + A P PA T
Sbjct: 194 ----LYVPRPSS------------KAAEVPKPA-------------------------TT 212
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
T+ D+ +G ++G+ G I + ++SGA I +S+ GT ER TISG ++
Sbjct: 213 QETVSFRDDIVGALIGKHGSRIQGVRKVSGATIAISEE----DGTGERSFTISGSPSAVG 268
Query: 318 TAESMIMQKVAYASDRLMD 336
A+ ++ + R D
Sbjct: 269 KAKRLLAFNLEREEQRRAD 287
>gi|392571215|gb|EIW64387.1| cytoplasmic protein [Trametes versicolor FP-101664 SS1]
Length = 325
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 140/297 (47%), Gaps = 28/297 (9%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
RS++PV S S +R LVS AG +IGK G + + + Q+G + +S+
Sbjct: 18 RSSSPVGSDS-------LTLRALVSTKDAGVIIGKAGKNVAELRDQTGVKAGVSK---VI 67
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK-LRLIVPNSSCGSI 136
PG +R++ ++GT++ + +A L++ +L++ + + T +RL++ ++ GS+
Sbjct: 68 PGVHERVLTVTGTVEGVAKAYSLIVSQLVSASPSSPTMSPTSSPTTAIRLLISHNLMGSV 127
Query: 137 IGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IG+ G IK+ D S A + S+ L S +R+V + G+ + RA+E I L E
Sbjct: 128 IGRNGLKIKAIQDSSGARMVASKDMLPQS----TERIVEVQGSSESIGRAIEEIGRCLLE 183
Query: 195 DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD 254
D + + AG SG P + P+ +
Sbjct: 184 DWERGVGTVLFHPGAGEERSGRRTHPTN-------RRSNGDVRRTSPSPSSPSSSPPTNL 236
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
RT +++I + +G ++GR G I EI ++SG++I ++ + T ER TI G
Sbjct: 237 RTQNISI--PSDMVGCIIGRNGTKITEIRRLSGSKISIAK--EPHDETGERMFTIVG 289
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV GAVIG+ G I +S ARI++ E P +R +MIS
Sbjct: 107 SVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVL---EGPPAVPERAVMISAKDEPD 163
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGAT 143
+D +LR + D L TE DQ T RL+VP S GS+IGK GAT
Sbjct: 164 TELPPAVDGLLRVHRRITDGLETET---DQPQRATVNTGPTRLLVPASQAGSLIGKQGAT 220
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
IKS D S+ V++I +DR+V + G + +A+ELI L
Sbjct: 221 IKSIQDASKCVLRIVENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 145/358 (40%), Gaps = 75/358 (20%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LVS GA+IG+ G I +S ARI++ + PG +R +MIS
Sbjct: 120 SVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKIL---DGPPGVPERAVMISAKDEPD 176
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGAT 143
ID +LR + + D L +E DQA + RL+VP S GS+IGK G T
Sbjct: 177 ALVPPAIDVLLRVHNRITDGLDSET---DQAQKGASPAGPTRLLVPASQAGSLIGKQGTT 233
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI-------LLKLSEDT 196
IKS D S+ ++I +DR+V + G + +A+ELI L+ S
Sbjct: 234 IKSIQDASKCALRILENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFLVDRSVLP 293
Query: 197 LYSQTMTV-------PYTYAGVFFS---------------GFHGMPYGAVPP-------P 227
L+ M V P + G+ G P+ +PP P
Sbjct: 294 LFEMQMKVHSAPREQPMPAPQQWGPPPPWSHPPNIPPSGPGYGGNPH-FMPPRPQDSYYP 352
Query: 228 VPAVPH-NTAAHYG-------------PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVG 273
P V H HYG P G + + + + + ++ + V+G
Sbjct: 353 PPNVHHVEKQPHYGISSYGRDANPTAAPTSGNQHLSHGSSQLSQKMQVPLS--YADAVIG 410
Query: 274 RGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYAS 331
G NI I + SGA I + + E V I+G ++TA+ +I +A AS
Sbjct: 411 SAGANISYIRKHSGATISIQE-----GVPGEMTVEIAGSASQVQTAQQLIKNFMAEAS 463
>gi|453231916|ref|NP_001263700.1| Protein M88.5, isoform c [Caenorhabditis elegans]
gi|413000919|emb|CCO25664.1| Protein M88.5, isoform c [Caenorhabditis elegans]
Length = 854
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 128/292 (43%), Gaps = 38/292 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARI---QLSRSHEFFPGTTDRIIMISGTIDE 93
IR +V +IG GSTI D S + R+ LS+ G DRI+ + G ++
Sbjct: 313 IRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDFVNLSKKERTVLGNNDRILTVHGVAEQ 372
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++D + +E +D +VG T LR+ N CG +IGKAG++IK M +
Sbjct: 373 ATKAVARILDVIQSEAVKDDV--NVGADTVLRMRAHNQLCGRLIGKAGSSIKEIMQKTGT 430
Query: 154 VIKISRL-----------DHSYYGLNDRLVTLTG-TLDEQMRALELILLKL-----SEDT 196
I +++ + GL +R + + G +++ ++A LI KL S+
Sbjct: 431 NITVTKYIEPPGGISGLTANELLGLMERTIMVRGPSIEAVVQAEALISAKLKKCYESDSQ 490
Query: 197 LYSQTMTVPYTYAGVFFSGFHGMPYGAVPPP--------VPAVPHNTAAHY--GPNMGGR 246
L +Q+M P + G AV P V V H ++ + N
Sbjct: 491 LRAQSMQCPMPPMMMPPILPPGASSSAVSAPHFIPTPVGVMQVQHFASSQHLVHQNANNS 550
Query: 247 KFQNN----KDDRTN--SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
Q + TN + + V D IG ++G G+NI I + +GA +K+
Sbjct: 551 FLQPGVLQIQPGTTNLRQVRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKI 602
>gi|154281643|ref|XP_001541634.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411813|gb|EDN07201.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 482
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 144/346 (41%), Gaps = 83/346 (23%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A IGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGMQDAVA 194
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK+G I+ + S A
Sbjct: 195 KAFGLIIRTLNNEPLEAPSTAQ---SKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGA 251
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED----------TLYS---- 199
+ S D +R + + G D A + + L E + Y+
Sbjct: 252 RLNAS--DSCLPLSTERTLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSG 309
Query: 200 --------QTMTVPYT--YAG------------------VFFSGFHGMPYGAVPPPVPAV 231
VPY AG V +G +G+PY P P +
Sbjct: 310 GAAGVVPGGMQVVPYVPQPAGGQYGHPDTFKRHQPPGNRVVSTGGYGVPYVHGQPGQPQM 369
Query: 232 PHNTAAHYG------------------------PNMGGRKFQNNK---DDRTNSLTIGVA 264
PH A HYG P GG Q + I +
Sbjct: 370 PHQ-ALHYGSSSRPGYSGAGPHQPAPYGAPQPAPVHGGPSAQPAGGVVPGAPVTQQIFIP 428
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
++ +G ++G+GG I EI +SG+ IK+++ D ++ER VTI+
Sbjct: 429 NDMVGAIIGKGGAKINEIRHLSGSVIKINEPQD---NSNERLVTIT 471
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 201 IRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS-- 258
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 259 CLPLSTERTLVILGVADAVHIATYYVAVTLVEQL 292
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+G+GG N+ +I ++SGA+ VS D+ G ER +T+SG Q ++ A +I++
Sbjct: 151 CIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGMQDAVAKAFGLIIR 202
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P+P VHG S P + P + + N + GA+IGKGG+ IN+ + SG+ I+
Sbjct: 400 PAP-VHGGPSAQPAGGVVPG---APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIK 455
Query: 70 LSRSHEFFPGTTDRIIMIS 88
++ + + +R++ I+
Sbjct: 456 INEPQD---NSNERLVTIT 471
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 190
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 191 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 246
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 247 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 303
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 304 YPHHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 340
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 341 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 390
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 214 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 273
Query: 97 AVDLVIDKL-----------------LTELHAEDQ------ADDVGTKTKLRLIVPNSSC 133
A ++ KL + L+ Q + + L +P +
Sbjct: 274 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 333
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 334 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 391
Query: 194 EDTLYS 199
E+ ++
Sbjct: 392 EENFFN 397
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 190
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ + P+ + HN
Sbjct: 191 ACRMILEIMQKEADETKLAEEI------------------------PLKILAHNGL---- 222
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 223 ---------------------------VGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 255
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 256 YNPERTITVKGTVEACASAEIEIMKKLREAFENDML 291
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 324 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 381
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 382 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 438
Query: 157 ISR 159
+ R
Sbjct: 439 VPR 441
>gi|340521021|gb|EGR51256.1| predicted protein [Trichoderma reesei QM6a]
Length = 475
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 120 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGIVDAVA 176
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E E A +KT LRL++P+ GSIIGK G+ I+ + S A
Sbjct: 177 KAFGLIIRTLNNEPLTE--ASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGAR 234
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 235 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNERFGGPAASAYA 287
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P + HYG
Sbjct: 288 TRSGAPVGSIPGGMQVVPYSPQPASGHYG 316
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 51/328 (15%)
Query: 23 VKSLSSDP-TEKPTY------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P TE T +R L+ + L G++IGKGGS I + Q SGAR+ S S
Sbjct: 183 IRTLNNEPLTEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDS-- 240
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
P +++R +++ G D + A V LL +L+ R P +S +
Sbjct: 241 CLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNE-------------RFGGPAASAYA 287
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++GA + S Q V + +YG + ++ R + +
Sbjct: 288 T--RSGAPVGSIPGGMQVVPYSPQPASGHYGRAENY-----GRHQERRPHHMPPAPYPQP 340
Query: 196 TLYSQ---TMTVPYTYAGVFFSGFHGMP--YGAVPPPVPAVPHNTAAHYGPNM----GGR 246
+ T +P Y G P YGA P V PH A H GP G+
Sbjct: 341 YAHGAPHGTPAMPMQYGA-------GQPAAYGAAAPHV--QPH-MAPHTGPQAHGAPQGQ 390
Query: 247 KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERK 306
+ I + ++ +G ++G+GG+ I EI Q+SG+ IK+++ D ++ER
Sbjct: 391 PMHAGMPGGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQD---NSNERL 447
Query: 307 VTISGPQRSIRTAESMIMQKVAYASDRL 334
VTI+G + R A M+ ++ R+
Sbjct: 448 VTITGTEECNRMALYMLYSRLESEKHRV 475
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 12 PDVHGKRSTAPVKS-LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
P HG P+ + + P + YI N + GA+IGKGG IN+ + SG+ I++
Sbjct: 381 PQAHGAPQGQPMHAGMPGGPITQQIYI----PNDMVGAIIGKGGQKINEIRQMSGSVIKI 436
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 437 NEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 473
>gi|408395856|gb|EKJ75028.1| hypothetical protein FPSE_04740 [Fusarium pseudograminearum CS3096]
Length = 372
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 39/312 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G D I R
Sbjct: 49 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGGCDAISR 105
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL A V + ++L++ ++ G+IIG+ G IK D S +
Sbjct: 106 AYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVR 165
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT----- 207
V + L S +R+V + GT + RA+ I L +D T TV Y
Sbjct: 166 MVAQKEMLPQS----TERIVEVQGTPEGIQRAIWEICKCLVDD-WQRGTGTVLYNPVVRT 220
Query: 208 ---------YAGVFFSGFHGMPYGAVPPPV-----------PAVPHNTAAHYGPNMGGRK 247
F G YG P + + P+N + + G
Sbjct: 221 QPSSSGSTSGGAGFNQGSGRSDYGGSPRVMRTGNGADFSNGSSRPYNRRSDSDAALRGPP 280
Query: 248 FQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKV 307
+ + + I + + +G ++GR G I EI + SGARI ++ T ER
Sbjct: 281 THDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA--PHDETGERMF 338
Query: 308 TISGPQRSIRTA 319
TI G ++ +A
Sbjct: 339 TIMGTAKANESA 350
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACANAEVEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 367 YPPHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 403
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 404 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 453
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAN 336
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 337 AEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACANAEVEIMKKLREAFENDML 354
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACANAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 367 YPPHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 403
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 404 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 453
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAN 336
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACANAEIEIMKKLREAFENDML 354
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|46108346|ref|XP_381231.1| hypothetical protein FG01055.1 [Gibberella zeae PH-1]
Length = 448
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+P A VIGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 114 HVRAVISSPEAATVIGKGGENVSNIRKLSNAKCTVS---DYQKGAVERILTVSGIVDAVA 170
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E ++ +KT LRL++P+ GSIIGK GA I+ D S A
Sbjct: 171 KAFGLIIRTLNNE--PLNEPSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQDASGAR 228
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 229 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNDRFGGPAASAYA 281
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P ++ HYG
Sbjct: 282 TRSGAPAGSIPGGMQVVPYSPQPSSGHYG 310
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 32/284 (11%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 177 IRTLNNEPLNEPSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQDASGARLNASDS-- 234
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
P +++R +++ G D + A V LL +L+ D G + +
Sbjct: 235 CLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLN-----DRFG----------GPAASA 279
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++GA S Q V + +YG ++ M
Sbjct: 280 YATRSGAPAGSIPGGMQVVPYSPQPSSGHYGRSENYGRHNDRRSHHMPPAPYPQQYPPHA 339
Query: 196 TLYSQTMTVPYTYAGVFFSGFHGMPYGA--VPPPVPAVPHNTAAHYGPNMGGRKFQNNKD 253
+ + + P+ +PP PH A P MGG
Sbjct: 340 AAQANPAMPMHYGGAQGGGAYGAAPHAQPHMPPHTGPQPHGGAPQAQP-MGGAIPGGPIT 398
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGD 297
+ I + ++ +G ++G+GG+ I EI Q+S + IK+++ D
Sbjct: 399 QQ-----IYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQD 437
>gi|380478963|emb|CCF43298.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 469
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG +++ + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 112 HIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVS---DYQKGAVERILTVSGVVDAAA 168
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E AE + T LRL++P+ GSIIGK GA I+ + S A +
Sbjct: 169 KAFGLIIRTLNNEPLAEPSSAQSKT-YPLRLLIPHILIGSIIGKGGARIREIQEASGARL 227
Query: 156 KIS 158
S
Sbjct: 228 NAS 230
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 175 IRTLNNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 232
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 233 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 267
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I + ++ +G ++G+GG+ I EI QISG+ IK+++ D ++ER VTI+G + R A
Sbjct: 399 IYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMAL 455
Query: 321 SMIMQKVAYASDRL 334
M+ ++ R+
Sbjct: 456 YMLYSRLESEKHRI 469
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Query: 1 METNESSYVPSPDVHGKRSTAPVK--SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
M+ + + VP P HG P+ +++ P + YI N + GA+IGKGG IN
Sbjct: 365 MQPHAGAAVPQP--HGAHPAQPIHGGAVAGAPLTQQIYI----PNDMVGAIIGKGGQKIN 418
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + SG+ I+++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 419 EIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 467
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTG 176
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TG
Sbjct: 391 AGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITG 446
Query: 177 TLDEQMRALELILLKLSED 195
T + AL ++ +L +
Sbjct: 447 TEECNRMALYMLYSRLESE 465
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
V+G+GG N+ I ++SGA+ VS D+ G ER +T+SG
Sbjct: 125 VIGKGGENVSNIRKMSGAKCTVS---DYQKGAVERILTVSG 162
>gi|429859891|gb|ELA34647.1| kh domain rna binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 471
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 2 ETNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQ 61
E+ E+ + S V G P S S D + +IR ++S+P A VIGKGG +++ +
Sbjct: 83 ESTETKPIQS-SVAGAVPATPSASASHDERDW-IHIRAVISSPEAATVIGKGGENVSNIR 140
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK 121
SGA+ +S ++ G +RI+ +SG +D +A L+I L E AE + T
Sbjct: 141 KMSGAKCTVS---DYQKGAVERILTVSGVVDAAAKAFGLIIRTLNNEPLAEPSSAQSKT- 196
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
LRL++P+ GSIIGK GA I+ + S A + S
Sbjct: 197 YPLRLLIPHILIGSIIGKGGARIREIQEASGARLNAS 233
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 178 IRTLNNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 235
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 236 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 270
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I + ++ +G ++G+GG+ I EI QISG+ IK+++ D ++ER VTI+G + R A
Sbjct: 401 IYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMAL 457
Query: 321 SMIMQKVAYASDRL 334
M+ ++ R+
Sbjct: 458 YMLYSRLESEKHRI 471
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 1 METNESSYVPSPDVHGKRSTAPVK--SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
M+ + + VP P HG P+ ++ P + YI N + GA+IGKGG IN
Sbjct: 367 MQPHAGAAVPQP--HGAHPAQPMHGGAMPGAPLTQQIYI----PNDMVGAIIGKGGQKIN 420
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + SG+ I+++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 421 EIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 469
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 394 GAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGT 449
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 450 EECNRMALYMLYSRLESE 467
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
V+G+GG N+ I ++SGA+ VS D+ G ER +T+SG
Sbjct: 128 VIGKGGENVSNIRKMSGAKCTVS---DYQKGAVERILTVSG 165
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 367 YPHHQFGPFP-------HH---HSYPEQ-------------EVVNLFIPTQAVGAIIGKK 403
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 404 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 453
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKL-----------------LTELHAEDQ------ADDVGTKTKLRLIVPNSSC 133
A ++ KL + L+ Q + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACASAEIEIMKKLREAFENDML 354
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|395839827|ref|XP_003792777.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Otolemur garnettii]
Length = 554
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 252 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 307
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 308 ISSLQDLSIYN-PERTITVKGTVEACANAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 364
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ P+ P PH+ H P + + + + +G ++G+
Sbjct: 365 Y---PHHQFSP----FPHH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 401
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 402 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 451
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 275 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAN 334
Query: 97 AVDLVIDKL-----------------LTELHAEDQ------ADDVGTKTKLRLIVPNSSC 133
A ++ KL + L+ Q + + L +P +
Sbjct: 335 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFSPFPHHHSYPEQEIVNLFIPTQAV 394
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 395 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 452
Query: 194 EDTLYS 199
E+ ++
Sbjct: 453 EENFFN 458
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 251
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ + P+ + HN
Sbjct: 252 ACRMILEIMQKEADETKLAEEI------------------------PLKILAHNGL---- 283
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 284 ---------------------------VGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 316
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 317 YNPERTITVKGTVEACANAEIEIMKKLREAFENDML 352
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 385 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 442
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 443 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 499
Query: 157 ISR 159
+ R
Sbjct: 500 VPR 502
>gi|425769369|gb|EKV07864.1| hypothetical protein PDIP_71440 [Penicillium digitatum Pd1]
gi|425770994|gb|EKV09451.1| hypothetical protein PDIG_62050 [Penicillium digitatum PHI26]
Length = 364
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 39/339 (11%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP+K+ D +R +VS+ AG +IGK G + D + ++G + +S+ PG
Sbjct: 32 APLKT-EEDYAVAELTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVPGV 87
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
DR++ ++G + + RA +V LL ++ + GT +RL++ ++ G+II
Sbjct: 88 HDRVLTVTGQLRSLARAYAIVAKGLLEGAPQMGMGGIVSNNGTH-PIRLLISHNQMGTII 146
Query: 138 GKAGATIKSFMDDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
G+ G IK D S + V + L S +R+V + GT + +A+ I L +D
Sbjct: 147 GRQGLKIKHIQDASGVRMVAQKEMLPQS----TERIVEVQGTPEGIEKAIWEIGKCLLDD 202
Query: 196 TLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHN-TAAHYGPNMGGRKFQNNK-D 253
T TV Y A V S P + PP +N + Y G F + +
Sbjct: 203 -WQRGTGTVLYNPA-VRASLSGSQPLNSNPPAGNGYQNNANSRQYNRTGNGADFSDGSYN 260
Query: 254 DRTNS-------------------LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD 294
R+NS I + + +G ++GRGG I EI + SGARI ++
Sbjct: 261 RRSNSDAGNRGYPQVTEDGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAK 320
Query: 295 RGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
T ER TI G ++ A ++ + + R
Sbjct: 321 A--PHDETGERMFTIMGSAQANEKALYLLYENLEAEKTR 357
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 141/319 (44%), Gaps = 67/319 (21%)
Query: 39 FLVSNPLAGA--VIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DE 93
F V PL VIGKGGSTI + SG+ I+++ S G + +I+++ T D
Sbjct: 314 FKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKC-GDDECVIIVTATESPDDM 372
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
AV+ V+ LL E ++ A++V K++L+V + G +IGK+G+ I + A
Sbjct: 373 KSMAVEAVL--LLQEYINDEDAENV----KMQLLVSSKVIGCVIGKSGSVINEIRKRTNA 426
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL---------------- 197
I IS+ G D LV ++G + AL I+L+L ED L
Sbjct: 427 NICISK------GKKDDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVATRKPPARTD 480
Query: 198 ----YSQTMTVPYTYAGVF-----FSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
S + YT SGFHG YG+ P N GP GR
Sbjct: 481 NCSFLSGSSNAGYTLPSFMSSMASTSGFHG--YGSFP-----AGDNVLGSTGPYSYGRL- 532
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS----DRGDFFSGTSE 304
+++L I + + V+G+GG N+ I +ISGA I++S GD +
Sbjct: 533 -----PSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIA---- 583
Query: 305 RKVTISGPQRSIRTAESMI 323
+SG +R AE+++
Sbjct: 584 ---LLSGTLEQMRCAENLV 599
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 82/325 (25%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE---- 93
R L + G VIGK G IN + + A+I++ + G + R+I I ++ E
Sbjct: 39 RILCPIDVVGGVIGKSGKVINAIRHNTKAKIKV---FDQLHGCSQRVITIYCSVKEKQEE 95
Query: 94 ----------ILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSII 137
+ A D ++ K+ + A D+ ++ T + RL+VP S S+I
Sbjct: 96 IGFTKSENEPLCCAQDALL-KVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLI 154
Query: 138 GKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRALELIL 189
GKAG IK ++A +K+ D H D +V ++G ++ + + A+ I+
Sbjct: 155 GKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIM 214
Query: 190 LKL--------------------------------------SEDTLYSQTMTVPYTYAGV 211
K+ ++D + Q VP + +
Sbjct: 215 YKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNAL 274
Query: 212 FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE--HIG 269
S F G A PVP + +G GG R+ L V +I
Sbjct: 275 SVSDFQGYAETAA-NPVPVFASSLPVTHG--FGG-------SSRSEELVFKVLCPLCNIM 324
Query: 270 FVVGRGGRNIMEISQISGARIKVSD 294
V+G+GG I I + SG+ I+V+D
Sbjct: 325 RVIGKGGSTIKRIREASGSCIEVND 349
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
+D + ++ LVS+ + G VIGK GS IN+ + ++ A I +S+ G D ++ +
Sbjct: 388 NDEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISK------GKKDDLVEV 441
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
SG + + A+ ++ +L ++ + D V T+ K N S S AG T+ SF
Sbjct: 442 SGEVSSVRDALIQIVLRLREDVLGD--KDSVATR-KPPARTDNCSFLSGSSNAGYTLPSF 498
Query: 148 M 148
M
Sbjct: 499 M 499
>gi|349802451|gb|AEQ16698.1| putative poly(rC)-binding protein 2 isoform g [Pipa carvalhoi]
Length = 207
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 38/207 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQ 181
LRL+VP S CGS+IGK G IK + + A ++++ L +S +R +T+ G
Sbjct: 18 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNS----TERAITIAGIPQSI 73
Query: 182 MRALELILLKLSEDTLYSQTMTVPY-----TYAGVFFSGFHGMPYGAVPPPVPAVPHNTA 236
+ ++ I + + E + +T+PY + +F G + + A+P P+ A
Sbjct: 74 IECVKQICVVMLESP--PKGVTIPYRPKPSSSPVIFAGGAYTIQGQAIPQPIDA------ 125
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
+T S + + ++ IG ++GR G I EI Q+SGA+IK+++
Sbjct: 126 ----------------SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP- 168
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMI 323
G+++R+VTI+G SI A+ +I
Sbjct: 169 --VEGSTDRQVTITGSTASISLAQYLI 193
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 8 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 65
Query: 87 ISGTIDEILRAVDLVIDKLL----------------------------TELHAEDQADDV 118
I+G I+ V + +L + A Q D
Sbjct: 66 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGAYTIQGQAIPQPIDA 125
Query: 119 GTKTKL-RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+T L +PN G IIG+ GA I S A IKI+ + G DR VT+TG+
Sbjct: 126 SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTITGS 182
Query: 178 LDEQMRALELILLKLSED 195
A LI ++ S +
Sbjct: 183 TASISLAQYLINVRRSSE 200
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG-PQRSI 316
+L + V G ++G+GG I EI + +GA+++V+ GD ++ER +TI+G PQ I
Sbjct: 17 TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIAGIPQSII 74
Query: 317 RTAESMIM 324
+ + +
Sbjct: 75 ECVKQICV 82
>gi|348522861|ref|XP_003448942.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Oreochromis niloticus]
Length = 588
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 129/302 (42%), Gaps = 33/302 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T D
Sbjct: 197 LRMLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENA--GAAEKPITIHSTPDGCSN 254
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++D + E +++ L+++ NS G +IGK G +K ++ I
Sbjct: 255 ACKTIMDIMQKEALDTKFTEEI----PLKILAHNSFVGRLIGKEGRNLKKIEQETGTKIT 310
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D + Y +R +T+ G+++ +A E ++ K+ E Y M G
Sbjct: 311 ISPLQDLTLYN-PERTITVKGSIEACAKAEEEVMKKIRES--YESDMAA-MNLQSNLIPG 366
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNM----------GGRKFQNNKDDRTNSLTIGVAD 265
+ G P TA GP+M G F + + T L I
Sbjct: 367 LNLNALGLFP--------TTAPGMGPSMSSITPPGAHGGSSSFGGHPESETVHLFIPALA 418
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+G ++G+ G++I ++S +GA IK++ +R V I GP + A+ I
Sbjct: 419 --VGAIIGKQGQHIKQLSHFAGASIKIAPAEGM--DAKQRMVIIVGPPEAQFKAQCRIFG 474
Query: 326 KV 327
K+
Sbjct: 475 KL 476
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK GATI++ + + I I R +++ G ++ +T+ T D
Sbjct: 197 LRMLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENA--GAAEKPITIHSTPDGCSN 254
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + I+ D + + + +T +P AH
Sbjct: 255 ACKTIM-----DIMQKEALDTKFTEE---------------------IPLKILAH----- 283
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NS +G ++G+ GRN+ +I Q +G +I +S D
Sbjct: 284 -------------NSF--------VGRLIGKEGRNLKKIEQETGTKITISPLQDLTLYNP 322
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE +M+K+ +Y SD
Sbjct: 323 ERTITVKGSIEACAKAEEEVMKKIRESYESD 353
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + R+++I G + +A + KL
Sbjct: 420 GAIIGKQGQHIKQLSHFAGASIKIAPAEGM--DAKQRMVIIVGPPEAQFKAQCRIFGKLK 477
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + G K +++L VP + G +IGK G T+ + + A + + R
Sbjct: 478 EE-------NFFGPKEEVKLEAHIKVPAFAAGRVIGKGGKTVNELQNLTCAEVVVPR 527
>gi|449509689|ref|XP_002192903.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Taeniopygia guttata]
Length = 531
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 149/365 (40%), Gaps = 57/365 (15%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R S P + +R LV GA+IGK
Sbjct: 76 SYIPDEEVSSPPPPQRSRRGGHSSRERGSSPGGSWQPKQLDFPLRMLVPTQFVGAIIGKE 135
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +++ + R G ++ I I T + A +++D + E
Sbjct: 136 GLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSEACRMILDIMQKEADETK 193
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLV 172
A++V L+++ NS G +IGK G +K D+ I IS L D + Y +R +
Sbjct: 194 SAEEV----PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYN-PERTI 248
Query: 173 TLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMP--- 220
T+ G+ + A I+ KL E + Q +P + G+F +G +P
Sbjct: 249 TVKGSTEACSNAEVEIMKKLREAYENDVVAVNQQANLIPGLNLSALGIFSTGLSMLPSTP 308
Query: 221 --YGAVPPPVPAVPHNTAAH----------------YGPNMGGRKFQNNKDDRTNSLTIG 262
GA A P++ A YG G + + +
Sbjct: 309 GARGA----AAATPYHPFAQQSGRRRTGSSAYLSSLYGAPPAGAFPHQHPLPEQEVVNLF 364
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
+ + +G ++G+ G++I ++++ +GA IK++ SER V I+GP + A+
Sbjct: 365 IPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEG--PDASERMVIITGPPEAQFKAQGR 422
Query: 323 IMQKV 327
I K+
Sbjct: 423 IFGKL 427
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TIK+ +Q+ + I R +++ G ++ +T+ T +
Sbjct: 119 LRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSE 176
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL + ++ +++ VP AH
Sbjct: 177 ACRMILDIMQKEADETKSAE--------------------------EVPLKILAH----- 205
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NSL +G ++G+ GRN+ +I Q +G +I +S D
Sbjct: 206 -------------NSL--------VGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNP 244
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+K+ AY +D
Sbjct: 245 ERTITVKGSTEACSNAEVEIMKKLREAYEND 275
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 8 YVPSPDVHGKRSTAPVKSLSS-------------DPTEKPTYIRFLVSNPLAGAVIGKGG 54
Y P G+R T LSS P + + + GA+IGK G
Sbjct: 319 YHPFAQQSGRRRTGSSAYLSSLYGAPPAGAFPHQHPLPEQEVVNLFIPTQAVGAIIGKKG 378
Query: 55 STINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQ 114
I +GA I+++ + P ++R+++I+G + +A + KL E +
Sbjct: 379 QHIKQLARFAGASIKIAPAE--GPDASERMVIITGPPEAQFKAQGRIFGKLKEENFFNPK 436
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+ K + + VP+ + G +IGK G T+ + + A + + R
Sbjct: 437 EE---VKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVIVPR 478
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK G IK + A IKI+ + ++R+V +TG + Q +
Sbjct: 361 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGP--DASERMVIITGPPEAQFK 418
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 419 AQGRIFGKLKEENFFN 434
>gi|342880970|gb|EGU81981.1| hypothetical protein FOXB_07505 [Fusarium oxysporum Fo5176]
Length = 471
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 112 HIRAVISSPEAATVIGKGGENVSNIRKLSNAKCTVS---DYQKGAVERILTVSGIVDAVA 168
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E +++ +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 169 KAFGLIIRTLNNE--PLNESSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 226
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 227 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNDRFGGPAASAYA 279
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P + HYG
Sbjct: 280 TRSGAPAGSIPGGMQVVPYSPQPASGHYG 308
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 130/310 (41%), Gaps = 31/310 (10%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS + K +R L+ + L G++IGKGG+ I + Q SGAR+ S S P +++R ++
Sbjct: 186 SSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS--CLPMSSERSLV 243
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ G D + A V LL +Q +D R P +S + ++GA S
Sbjct: 244 VMGVADAVHIATYYVGSTLL------EQLND-------RFGGPAASAYAT--RSGAPAGS 288
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
Q V + +YG ++ M + M + Y
Sbjct: 289 IPGGMQVVPYSPQPASGHYGRSENYGRHNDRRSHHMPPAPYPQQYPHAAAQANPAMPMHY 348
Query: 207 TYAGVFFSGF---HGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
A + H P+ A P PH A P MGG + I +
Sbjct: 349 GGAQGGGAYGAAPHAQPHMA--PHAGPQPHGGAPQAQP-MGGAIPGGPITQQ-----IYI 400
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ +G ++G+GG+ I EI Q+S + IK+++ D ++ER VTI+G + R A M+
Sbjct: 401 PNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQD---NSNERLVTITGTEECNRMALYML 457
Query: 324 MQKVAYASDR 333
++ +R
Sbjct: 458 YSRLGEVQNR 467
>gi|261195190|ref|XP_002623999.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239587871|gb|EEQ70514.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239610640|gb|EEQ87627.1| KH domain RNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327348926|gb|EGE77783.1| KH domain RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 496
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 159/389 (40%), Gaps = 90/389 (23%)
Query: 24 KSLSSDPTEKPT-------YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
+S S P+++ T +IR ++S+ A IGKGG ++ + SGA+ +S ++
Sbjct: 120 RSSSQPPSQQATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVS---DY 176
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCG 134
G +RI+ +SG D + +A L+I L E L A A +KT LRL++P+ G
Sbjct: 177 SRGAVERILTVSGMQDAVAKAFGLIIRTLNNEPLEAPSTAQ---SKTYPLRLLIPHLLIG 233
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
SIIGK+G I+ + S A + S D +R + + G D A + + L E
Sbjct: 234 SIIGKSGVRIREIQEASGARLNAS--DSCLPLSTERTLVILGVADAVHIATYYVAVTLVE 291
Query: 195 D----------TLYS------------QTMTVPY--TYAGVFF----------------- 213
+ Y+ VPY AG +
Sbjct: 292 QLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYIPQPAGGQYGHPDTFKRHQPQANRAV 351
Query: 214 -SGFHGMPYGAVPPPVPAVPHNTAAHYG--------------PNMGGRKFQNNKDDRTNS 258
+G +G+PY P P +PH A HYG P G +
Sbjct: 352 STGGYGVPYVHGQPGQPQMPHQ-ALHYGSSSRPGYTGAGPHQPAPYGAPQPTQVHGAPTA 410
Query: 259 LTIG-------------VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
G + ++ +G ++G+GG I EI +SG+ IK+++ D ++ER
Sbjct: 411 QPAGGVVPGAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQD---NSNER 467
Query: 306 KVTISGPQRSIRTAESMIMQKVAYASDRL 334
VTI+G + A M+ ++ R+
Sbjct: 468 LVTITGTPECNQMALYMLYSRLESEKHRI 496
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 202 IRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS-- 259
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 260 CLPLSTERTLVILGVADAVHIATYYVAVTLVEQL 293
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 9 VPSP-DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
P P VHG + P + P + + N + GA+IGKGG+ IN+ + SG+
Sbjct: 398 APQPTQVHGAPTAQPAGGVVPG---APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSV 454
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
I+++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 455 IKINEPQD---NSNERLVTITGTPECNQMALYMLYSRLESEKH 494
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 367 YPHHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 403
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 404 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 453
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKL-----------------LTELHAEDQ------ADDVGTKTKLRLIVPNSSC 133
A ++ KL + L+ Q + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACASAEIEIMKKLREAFENDML 354
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|342880804|gb|EGU81822.1| hypothetical protein FOXB_07617 [Fusarium oxysporum Fo5176]
Length = 372
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 39/312 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G D I R
Sbjct: 49 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGGCDAISR 105
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL A V + ++L++ ++ G+IIG+ G IK D S +
Sbjct: 106 AYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVR 165
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT----- 207
V + L S +R+V + GT + RA+ I L +D T TV Y
Sbjct: 166 MVAQKEMLPQS----TERIVEVQGTPEGIQRAIWEICKCLVDD-WQRGTGTVLYNPVVRT 220
Query: 208 ---------YAGVFFSGFHGMPYGAVPPPV-----------PAVPHNTAAHYGPNMGGRK 247
F G YG P + + P+N + + G
Sbjct: 221 QPSGSGNASGGAGFSQGSGRSDYGGSPRVMRTGNGADFSNGNSRPYNRRSDSDAALRGPP 280
Query: 248 FQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKV 307
+ + + I + + +G ++GR G I EI + SGARI ++ T ER
Sbjct: 281 THDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA--PHDETGERMF 338
Query: 308 TISGPQRSIRTA 319
TI G ++ +A
Sbjct: 339 TIMGTAKANESA 350
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 144/339 (42%), Gaps = 72/339 (21%)
Query: 35 TYIRFLVSNPLA--GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
T I F + P++ G+VIG+ G I +SQ+GA++++ E G +RII +S + D
Sbjct: 311 TEITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVC---EQVNGAEERIICVSSSDD 367
Query: 93 EI--LRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ + A + + ++ + E +++ RL+V S G +IGK G+ IK ++
Sbjct: 368 GLAPMLAAQVALFRVYRCI-VESAGNEI--PLPFRLLVQTSQIGCLIGKGGSIIKQIRNE 424
Query: 151 SQAVIK------------------ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
+ A ++ I + L R+V+ G L +R L
Sbjct: 425 TGATVRVLPSEALPSCANDDELLEIGQWPADACALGIRIVS--GRLRGNIRHKAAERLTS 482
Query: 193 SEDTLYSQTMTVPYTY--AGVFFSGFHGMPYG---------------AVPPPVPAVPHNT 235
+ D +QTM T+ A + G YG A PPV P +
Sbjct: 483 TADAQNTQTMGFDATWQQAELIPYGMTQTAYGSPETVMMSKTKSTGGARAPPVEIAPGVS 542
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV--- 292
NS+ + ++ +HIG V+GRGG NI Q+SGARIK+
Sbjct: 543 V-------------------VNSVQMAISSQHIGSVLGRGGCNISLARQVSGARIKLYPG 583
Query: 293 ---SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
S R S S+R + ISG + +A+ +I + +A
Sbjct: 584 AAGSRRTADRSVDSDRLLEISGSSEQVASAQDIIQRFIA 622
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 127/322 (39%), Gaps = 68/322 (21%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS-------GT 90
R L G VIGK G I ++++GAR++++ + G +R+I+++ G
Sbjct: 61 RLLCPTTRIGRVIGKEGRVIKATRAETGARVKVAPTTR---GADERVILVASGDDLTVGE 117
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDV-----------------GTKTKL-RLIVPNSS 132
E + ++ + ++ + E+ G T + RL+VP
Sbjct: 118 DGEGMTTAEVALFRIFDTITGEEGVTAARGGEGEGEGEASGGSTRGASTPICRLLVPRVQ 177
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKI--SRLDHSYYGLNDRLVTLT--------GTLDEQM 182
GS+IGK G I + S A +++ + + + D L+ +T D+++
Sbjct: 178 VGSLIGKGGTVISAIRASSGATVRVMPANMLPACASQGDELLQITAPSRDADGAERDQKL 237
Query: 183 ------RALELILLKLSE---DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPH 233
AL +I L E +++ P+ F G P+ V P
Sbjct: 238 SMASVKNALRMIAKHLREYPSKNAATESNRSPFE---AFMIGNKTAPHAGVESP------ 288
Query: 234 NTAAHYGPNMGGRKFQN-----NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
A G +M R N + T L V+ G V+GR G I +I +GA
Sbjct: 289 --GAKNGGHMSTRMNLNGVYVPGGTEITFRLLCPVS--KTGSVIGRNGEVIQQIRSQTGA 344
Query: 289 RIKVSDRGDFFSGTSERKVTIS 310
++KV ++ +G ER + +S
Sbjct: 345 KVKVCEQ---VNGAEERIICVS 363
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 128/293 (43%), Gaps = 52/293 (17%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T R+L G++IG+GG I + + ++I R E PG +R++ I DE
Sbjct: 42 TVYRYLCPARKIGSIIGRGGEIIKQLRIDTKSKI---RVGETVPGCEERVVTIYSPSDET 98
Query: 95 LRAVD-------------LVIDKLLTE-LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
D V DK++ E L ED ++ + +L+VP+ G IIGK
Sbjct: 99 NEYEDSGNYISPAQDALFRVHDKVIAEDLQVEDDSEG-SPQVTAKLLVPSDQIGCIIGKG 157
Query: 141 GATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
G +++ ++ AVI+I + +H +D LV ++G +AL I +L ++
Sbjct: 158 GQIVQNIRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPSR 217
Query: 199 SQTM---TVPYTYAGVFFSGFHGMPYGAVPPPVPAVP-HNTAAHYGPNMGGRKFQNNKDD 254
SQ + VP Y+ V G++ P A P A GP G F+ + D
Sbjct: 218 SQHLLVSAVPNVYSSV----------GSLVGPSAAAPIVGIAPLMGPYGG---FKGDTGD 264
Query: 255 RTNSLTIGVADE---------------HIGFVVGRGGRNIMEISQISGARIKV 292
+ SL DE +IG V+G+GG I +I Q SGA IKV
Sbjct: 265 WSRSLYSAPRDELASKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKV 317
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
+AP L+S K +R + GAVIGKGG+ IN + +SGA I++ S
Sbjct: 271 SAPRDELAS----KEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSS---VAE 323
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKL--LTELHAEDQADDVGTKT-KLRLIVPNSSCGSI 136
D +I IS EI I+ L +E D G + RL+VP+S G +
Sbjct: 324 GDDCLITISAK--EIYDHYSPTIEAAVRLQPRCSEKMERDSGLISFTTRLLVPSSRIGCL 381
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKL 192
+GK GA I ++A+I+I R ++ +D +V + G LD AL I +L
Sbjct: 382 LGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRL 439
>gi|154295229|ref|XP_001548051.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347829292|emb|CCD44989.1| similar to KH domain RNA-binding protein [Botryotinia fuckeliana]
Length = 371
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 142/342 (41%), Gaps = 45/342 (13%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P+ + E +R +VS+ AG +IGKGG + D + ++G + +S+ G
Sbjct: 37 PLPKTDEEYAESQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVH 93
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
DR++ ISG D I RA +V LL ++ + GT ++L++ ++ G+IIG
Sbjct: 94 DRVLTISGGCDSISRAYSIVAKALLEGAPQMGMGGVVSNNGTHP-IKLLISHNQMGTIIG 152
Query: 139 KAGATIKSFMDDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED- 195
+ G IK D S + V + L S +R+V + G + +A+ I L +D
Sbjct: 153 RQGLKIKHIQDASGVRMVAQKEMLPQS----TERIVEVQGNPEGIQKAIWEICKCLVDDW 208
Query: 196 ------TLYSQTMTVPYTYAGVFFSGF---HGMPYG---------------AVPPPVPAV 231
LY+ + +G G G YG + P
Sbjct: 209 ARGTGTVLYNPMVRTQTGNSGGMSQGNVGGTGREYGSSRVMRTGNGADFSESAPRSYNRR 268
Query: 232 PHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIK 291
+ AA GP + + + I + + +G ++GR G I EI + SGARI
Sbjct: 269 SESDAAQRGP-----PTHDENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARIS 323
Query: 292 VSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
++ T ER TI G ++ +A ++ + + R
Sbjct: 324 IAK--SPHDETGERMFTIMGTAKANDSALYLLYENLEAEKQR 363
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 367 YPHHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 403
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 404 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 453
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKL-----------------LTELHAEDQ------ADDVGTKTKLRLIVPNSSC 133
A ++ KL + L+ Q + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACASAEIEIMKKLREAFENDML 354
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|345566886|gb|EGX49826.1| hypothetical protein AOL_s00076g710 [Arthrobotrys oligospora ATCC
24927]
Length = 379
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 150/350 (42%), Gaps = 53/350 (15%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
PV++ D + P +R +VS+ AG +IGK G + D + ++G + +S+ PG
Sbjct: 37 PVRT-DEDYAQSPLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVPGVH 92
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
DR++ ++G +D + +A +V L+ +GT +RL++ ++ G+IIG+ G
Sbjct: 93 DRVLTVTGNLDGVAKAYAMVAQTLVDSPPGAIPTTPMGTH-PVRLLISHNQMGTIIGRQG 151
Query: 142 ATIKSFMDDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
IK D S + V + L S +R+V + G+ D +A+ I L +D
Sbjct: 152 LKIKHIQDVSGVRMVAQKEMLPQS----TERIVEVQGSADGIRQAIWEIGKCLVDD-WQR 206
Query: 200 QTMTVPYTYAGVFFSGFHGMPYGAVPPPVP------AVPHNTAAHYGPNMGGRKFQNNKD 253
T T+ Y A V + HG G+ P + + P + + PN G + N D
Sbjct: 207 GTGTILYNPA-VRSNTSHGT--GSSPSVISNGGAGTSGPTDRFTNERPNRGPVRTGNGTD 263
Query: 254 ------------------------------DRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+ + I + + +G ++GRGG I EI
Sbjct: 264 FSEPSPSFPRRGHSDSTSRASAPAPNTENGEELQTQNISIPADMVGCIIGRGGSKISEIR 323
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
+ SGARI ++ T ER TI G +S A ++ + + R
Sbjct: 324 KSSGARISIAKA--PHDDTGERMFTIVGSPQSNEKALYLLYENLEAEKTR 371
>gi|401885149|gb|EJT49276.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 2479]
gi|406694587|gb|EKC97911.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 8904]
Length = 351
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 152/353 (43%), Gaps = 55/353 (15%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P ++L + P E +R LVS AG +IGKGG+TI + + + + +S+ PG
Sbjct: 8 PPQALEASPEE--LTLRSLVSTKEAGIIIGKGGATIANIRQVANCKAGVSK---VVPGVQ 62
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA---DDVGTKTKLRLIVPNSSCGSIIG 138
DR++ +SG E + A + +LL E D + V T +RL++ ++ G++IG
Sbjct: 63 DRVLSVSGD-PEAIAAAYAEVARLLLETPLSDSSMPPPPVNQFTSIRLLISHNLMGTVIG 121
Query: 139 KAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
+AG IK D S A + S+ L S +R+V + G D A+ I L ED
Sbjct: 122 RAGVKIKQIQDMSGARMVASKEMLPQS----TERVVEVQGAQDAIKTAIFEIAKCLLED- 176
Query: 197 LYSQTMTVPY-----TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNN 251
T TV Y AGV G AV P + + +G G F NN
Sbjct: 177 WERNTGTVQYHPGAAGDAGVLAGGLGAQ---AVTGPTGGIRRTSMGGFGSGSPGPNF-NN 232
Query: 252 KDDRTN----------------------------SLTIGVADEHIGFVVGRGGRNIMEIS 283
D R + + I + + +G ++GRGG I EI
Sbjct: 233 SDRRVSRGSISGGTSGQERRVSESQPVLNDPNLRTQNISIPSDMVGCIIGRGGTKITEIR 292
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
++SG+RI ++ +G ER TI G S A ++ ++ +R ++
Sbjct: 293 RLSGSRISIAKVPHDETG--ERMFTIVGTAESTERALMLLYSQLESEKERRVN 343
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 367 YPHHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 403
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 404 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 453
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKL-----------------LTELHAEDQ------ADDVGTKTKLRLIVPNSSC 133
A ++ KL + L+ Q + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACASAEIEIMKKLREAFENDML 354
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T R+L G+VIG+GG + + + ++I++ E PG+ +R+I I +E
Sbjct: 43 TVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIG---ETVPGSDERVITIYSASNET 99
Query: 95 -------------LRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
A+ + D+++ + + ++ ++ G + RL+VP+ G IIGK G
Sbjct: 100 NSLEESSDYVSPAQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGG 159
Query: 142 ATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+++ ++ A ++I + DH +D LV ++G +AL I +L ++ S
Sbjct: 160 QIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRS 219
Query: 200 QTM---TVP--YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD 254
Q + +P Y+ G + HG P + P V P G + + +
Sbjct: 220 QHLLASAIPGVYSSGGSLMAPTHGAPIMGLAPLV-----------SPYGGYKAPREDLSS 268
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ SL + E+IG V+G+GG I +I Q + A IKV
Sbjct: 269 KEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKV 306
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--------- 71
AP + LSS K +R + G VIGKGG+ IN + ++ A I++
Sbjct: 261 APREDLSS----KEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDC 316
Query: 72 ----RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRL 126
S EFF + S T++ LR L +E D G + RL
Sbjct: 317 LINISSKEFFEDS------YSPTLEAALR---------LQPRCSEKVERDSGIISFTTRL 361
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRA 184
+VP S G +IGK GA I ++A I+I S+ + L +D +V ++G LD A
Sbjct: 362 LVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEA 421
Query: 185 LELILLKL 192
L I+ +L
Sbjct: 422 LVHIVTRL 429
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T R+L G+VIG+GG + + + ++I++ E PG+ +R+I I +E
Sbjct: 43 TVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIG---ETVPGSDERVITIYSASNET 99
Query: 95 -------------LRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
A+ + D+++ + + ++ ++ G + RL+VP+ G IIGK G
Sbjct: 100 NSLEESSDYVSPAQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGG 159
Query: 142 ATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+++ ++ A ++I + DH +D LV ++G +AL I +L ++ S
Sbjct: 160 QIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRS 219
Query: 200 QTM---TVP--YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD 254
Q + +P Y+ G + HG P + P V P G + + +
Sbjct: 220 QHLLASAIPGVYSSGGSLMAPTHGAPIMGLAPLV-----------SPYGGYKAPREDLSS 268
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ SL + E+IG V+G+GG I +I Q + A IKV
Sbjct: 269 KEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKV 306
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--------- 71
AP + LSS K +R + G VIGKGG+ IN + ++ A I++
Sbjct: 261 APREDLSS----KEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDC 316
Query: 72 ----RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRL 126
S EFF + S T++ LR L +E D G + RL
Sbjct: 317 LINISSKEFFEDS------YSPTLEAALR---------LQPRCSEKVERDSGIISFTTRL 361
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRA 184
+VP S G +IGK GA I ++A I+I S+ + L +D +V ++G LD A
Sbjct: 362 LVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEA 421
Query: 185 LELILLKL 192
L I+ +L
Sbjct: 422 LVHIVTRL 429
>gi|392578180|gb|EIW71308.1| hypothetical protein TREMEDRAFT_42752 [Tremella mesenterica DSM
1558]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 8/144 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGKGG+ +ND + +S AR+ +S S PG +RI+ +SG +D + +
Sbjct: 1 MRCLIVTQDASIIIGKGGAHVNDIRERSHARVTVSES---IPGNPERILNVSGPLDAVAK 57
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ ++ E D A G++ ++ I+PNS GS+IGK GA IK + S A +
Sbjct: 58 AFGLIVRRINDEPF--DVASVPGSRAVTIKFIIPNSRMGSVIGKQGAKIKEIQEASGARL 115
Query: 156 KISRLDHSYYGLNDRLVTLTGTLD 179
S + G +R+++ +G D
Sbjct: 116 NAS--ESMLPGSTERVLSCSGVAD 137
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 90/227 (39%), Gaps = 54/227 (23%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
++S P + I+F++ N G+VIGK G+ I + Q SGAR L+ S PG+T+R++
Sbjct: 73 VASVPGSRAVTIKFIIPNSRMGSVIGKQGAKIKEIQEASGAR--LNASESMLPGSTERVL 130
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT--KTKLR------------------ 125
SG D I AV I +L E + G +T R
Sbjct: 131 SCSGVADAIHIAV-YYIGTILLEYQERNPGSTSGVYRQTGARGGPSGSYGGGGSGGGGGG 189
Query: 126 --------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+ +PNS G+IIGK GA I SQ I+++
Sbjct: 190 GGGGGGGGGGGGGGSGGLPPGMQMQQIFIPNSLVGAIIGKGGAKINEIRTQSQCQIRVTD 249
Query: 160 LDHSY-----YGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQT 201
++RLVT+ G A++L+ +L + QT
Sbjct: 250 PGTPAGPGQPVNPDERLVTIQGLPQNINIAVQLLYGRLEAEKQKMQT 296
>gi|222618607|gb|EEE54739.1| hypothetical protein OsJ_02091 [Oryza sativa Japonica Group]
Length = 1500
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 214 SGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD---RTNSLT-------IGV 263
F YG + VP+N A +YGPN G + QNNK R++ LT IG+
Sbjct: 1371 CNFSWHRYGGSGIYLFLVPYNNAVNYGPNGYGGRDQNNKPSTPMRSHLLTMTPKILTIGI 1430
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
ADEH G VV R GRNI EI Q SGARIK+SDR ++
Sbjct: 1431 ADEHFGAVVRRAGRNITEIIQASGARIKISDRDNW 1465
>gi|328768620|gb|EGF78666.1| hypothetical protein BATDEDRAFT_26534 [Batrachochytrium
dendrobatidis JAM81]
Length = 493
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R+TAP S + +P +R L+S AG VIGKGGS + + + +G+R+ +S
Sbjct: 106 RTTAPSDSNAETRESRPIRMRSLISPKEAGVVIGKGGSHVVEIRDTTGSRVTVSGQ---V 162
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
PG DR++ + G + RA ++ KL + H D LRL+VP S G II
Sbjct: 163 PGVFDRVVTVLGAAEANGRAYMMISTKLAGQQHDNQNTDPQSRTVTLRLLVPQSRIGYII 222
Query: 138 GKAGATIKSFMDDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
G+ G IK + S + + + L +S +R+VT+ GT A+ I L + E
Sbjct: 223 GRQGVRIKEIQEVSGCRVLAQGDPLPNS----TERVVTVIGTPSCLEIAVTRICLLVGE 277
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 84/217 (38%), Gaps = 59/217 (27%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++R ++ G +IGK G+ + D + + + +S G+ DR+VT+ G +
Sbjct: 124 RMRSLISPKEAGVVIGKGGSHVVEIRDTTGSRVTVS---GQVPGVFDRVVTVLGAAEANG 180
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
RA +I KL+
Sbjct: 181 RAYMMISTKLA------------------------------------------------- 191
Query: 243 MGGRKFQNNKDD---RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
G++ N D RT +L + V IG+++GR G I EI ++SG R+ +GD
Sbjct: 192 --GQQHDNQNTDPQSRTVTLRLLVPQSRIGYIIGRQGVRIKEIQEVSGCRVLA--QGDPL 247
Query: 300 SGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
++ER VT+ G + A + I V +D+ D
Sbjct: 248 PNSTERVVTVIGTPSCLEIAVTRICLLVGEVNDKHTD 284
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + + GA+IGKGG IN+ + SG ++++ PG R+I ++GT D + +A
Sbjct: 419 QITIPDECVGAIIGKGGCKINEVRISSGCQVKIGDPQ---PGQRRRVITLTGTADAVSKA 475
Query: 98 VDLVIDKLLTELHAEDQ 114
+++ ++ E +D+
Sbjct: 476 QFMLLARVEQESQNKDR 492
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
+A YG +G D T I + DE +G ++G+GG I E+ SG ++K+
Sbjct: 401 SAGYGGGVGA------SDGVTKVEQITIPDECVGAIIGKGGCKINEVRISSGCQVKI--- 451
Query: 296 GDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYAS 331
GD G R +T++G ++ A+ M++ +V S
Sbjct: 452 GDPQPGQRRRVITLTGTADAVSKAQFMLLARVEQES 487
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A D TK + ++ +P+ G+IIGK G I S +KI G R++TL
Sbjct: 410 ASDGVTKVE-QITIPDECVGAIIGKGGCKINEVRISSGCQVKIG---DPQPGQRRRVITL 465
Query: 175 TGTLDEQMRALELILLKLSEDT 196
TGT D +A ++L ++ +++
Sbjct: 466 TGTADAVSKAQFMLLARVEQES 487
>gi|453088188|gb|EMF16228.1| KH domain RNA-binding protein [Mycosphaerella populorum SO2202]
Length = 369
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 44/309 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V++ AG +IGK G + D + ++G R +S+ PG DR++ ++G ++ I
Sbjct: 45 LRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSK---VVPGVHDRVLTVTGILNGIAD 101
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK---LRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A LV D L+ V +RL++ ++ G+IIG+ G IK D S
Sbjct: 102 AYGLVADCLVKGAPQMGIGGSVAAAPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGV 161
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTV 204
+ V + L S +R+V + GT D +A+ I L +D LYS ++ V
Sbjct: 162 RMVAQKEMLPQS----TERIVEVQGTPDGIQKAVWEIGKCLVDDEQRGYGTVLYSPSVRV 217
Query: 205 PYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTA-------AHYGPNMGG------------ 245
+G G G P N A A Y P G
Sbjct: 218 GGGAPAAPLNGT-GESRGYNAPRSYNRTGNGADFTSGAPASYPPRRNGASEGGGGGSGPP 276
Query: 246 RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+ + +D +T +++I + +G ++GRGG I EI + SGARI ++ T ER
Sbjct: 277 PRVEEGEDIQTQNISIPA--DMVGCIIGRGGSKISEIRKSSGARISIAKA--PHDDTGER 332
Query: 306 KVTIS-GPQ 313
TI+ GPQ
Sbjct: 333 MFTITGGPQ 341
>gi|310790849|gb|EFQ26382.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 471
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 113 HIRAVISSPEAATIIGKGGENVSNIRKMSGAKCTVS---DYQKGAVERILTVSGVVDAAA 169
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E AE + T LRL++P+ GSIIGK GA I+ + S A +
Sbjct: 170 KAFGLIIRTLNNEPLAEPSSAQSKT-YPLRLLIPHILIGSIIGKGGARIREIQEASGARL 228
Query: 156 KIS 158
S
Sbjct: 229 NAS 231
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 176 IRTLNNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 233
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 234 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 268
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I + ++ +G ++G+GG+ I EI QISG+ IK+++ D ++ER VTI+G + R A
Sbjct: 401 IYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMAL 457
Query: 321 SMIMQKVAYASDRL 334
M+ ++ R+
Sbjct: 458 YMLYSRLESEKHRI 471
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Query: 1 METNESSYVPSPDVHGKRSTAPVK--SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
M+ + + VP P HG P+ +++ P + YI N + GA+IGKGG IN
Sbjct: 367 MQPHAGAAVPQP--HGAHPAQPMHGAAVAGAPLTQQIYI----PNDMVGAIIGKGGQKIN 420
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + SG+ I+++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 421 EIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 469
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTG 176
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TG
Sbjct: 393 AGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITG 448
Query: 177 TLDEQMRALELILLKLSED 195
T + AL ++ +L +
Sbjct: 449 TEECNRMALYMLYSRLESE 467
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 139/294 (47%), Gaps = 26/294 (8%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS--GTIDEIL 95
R +V++ G VIGK GS IN + +GARI+++ + DR+I+IS G +E
Sbjct: 96 RIVVASNKIGKVIGKQGSKINQLREDTGARIKIA---DPVTPLEDRVIIISSKGEEEEET 152
Query: 96 RAVDLVIDKLLT---ELHAEDQAD-DVGTK----TKLRLIVPNSSCGSIIGKAGATIKSF 147
A + + ++ T E E A VGT+ +RL++ S GS+IG +G TIK
Sbjct: 153 SAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTIKEI 212
Query: 148 MDDSQAVIKISRLDHSYYGLN----DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+DS A IKI + S + DRLV ++G + + ++AL+ I + L E T
Sbjct: 213 RNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLREHPPREVIST 272
Query: 204 VPYTYAGVF-FSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTI- 261
P YAG+ +G +P +P ++ ++ G + +T+
Sbjct: 273 RPTYYAGLSPANGLMVLPQTVLPGYNMQTGNSNYSYLGAAGRAAGGTISAAFALPKVTVE 332
Query: 262 -GVADEHIGFVVGRGGRNIMEISQISGARIKV------SDRGDFFSGTSERKVT 308
+ G V+G+ G NI +I +SGA +KV + R FF GT+ + T
Sbjct: 333 MKIPSSVAGGVIGKRGDNISQIRSLSGAIVKVIGEKDGATRTIFFEGTAHQVAT 386
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP-----GTTDRIIMIS 88
P +R L++ AG++IG G TI + ++ SGA I++ P TDR++ IS
Sbjct: 186 PNMMRLLIAGSQAGSLIGASGKTIKEIRNDSGATIKI-LPQNLSPICASASETDRLVQIS 244
Query: 89 GTIDEILRAVD 99
G + ++L+A+D
Sbjct: 245 GEVSQVLKALD 255
>gi|444727083|gb|ELW67590.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Tupaia
chinensis]
Length = 644
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 123/287 (42%), Gaps = 32/287 (11%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 249 RQGSPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN-- 304
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L ++ E Q + L+++ N+ G +I
Sbjct: 305 AGAAEKSITILSTPE----GTSAACKSILEIMYKEAQDIKFTEEIPLKILAHNNFVGRLI 360
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-- 195
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 361 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYE 420
Query: 196 ----TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
++ Q +P G+F P +PPP P Y +F
Sbjct: 421 NDIASMNLQAHLIPGLNLNALGLF------PPTSGIPPPTSGPPSAMTPPYP------QF 468
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
+ ++ T ++ + + +G ++G+ G++I ++S+ +GA IK R
Sbjct: 469 EQSE---TETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKAQGR 512
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +T+ T +
Sbjct: 266 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPEGTSA 323
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A + IL + +Y + + +T +P AH
Sbjct: 324 ACKSIL-----EIMYKEAQDIKFT---------------------EEIPLKILAH----- 352
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ +I Q + +I +S +
Sbjct: 353 ------NN---------------FVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNP 391
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+K+ +Y +D
Sbjct: 392 ERTITVKGNVETCAKAEEEIMKKIRESYEND 422
>gi|357140395|ref|XP_003571754.1| PREDICTED: uncharacterized protein LOC100835547 [Brachypodium
distachyon]
Length = 692
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IGK G TI Q QSGA+IQ++R + PG+ R + +SGT ++I RA +L
Sbjct: 149 IPNGRVGVIIGKSGETIKHLQLQSGAKIQVTRDMDVQPGSQTRSVDLSGTPEQISRAEEL 208
Query: 101 VIDKLLTELHAEDQADDVGTKTKLRLIVP------------NSSCGSIIGKAGATIKSFM 148
+ D L AE A GT + + P N+ G +IGK G TIKS
Sbjct: 209 IRDVL-----AEADAGSSGTVSNRKYNAPQPGAEQFQMQIANNKVGLVIGKGGETIKSMQ 263
Query: 149 DDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A I++ L D S +R + + GT D+ A +L+ SE+
Sbjct: 264 AKSGARIQVIPLHLPPGDTS----TERTLYIDGTTDQIEIAKQLVAEVTSEN 311
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 44/175 (25%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+ TK ++ +PN G IIGK+G TIK S A I+++R G R V L+GT
Sbjct: 141 GSTTK-KIDIPNGRVGVIIGKSGETIKHLQLQSGAKIQVTRDMDVQPGSQTRSVDLSGTP 199
Query: 179 DEQMRALELILLKLSE-DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
++ RA ELI L+E D S T++
Sbjct: 200 EQISRAEELIRDVLAEADAGSSGTVS-------------------------------NRK 228
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ P G +FQ + +A+ +G V+G+GG I + SGARI+V
Sbjct: 229 YNAPQPGAEQFQ-----------MQIANNKVGLVIGKGGETIKSMQAKSGARIQV 272
>gi|308486267|ref|XP_003105331.1| hypothetical protein CRE_21287 [Caenorhabditis remanei]
gi|308256839|gb|EFP00792.1| hypothetical protein CRE_21287 [Caenorhabditis remanei]
Length = 1058
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ GA+IGK G ++ ++ + RIQ+S+++E + GT++RI ++ G ++ I+
Sbjct: 521 IKILIPPSAVGAIIGKAGEAMHSLKNGNNCRIQISKNNETYLGTSERICLVKGRLNNIMA 580
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
++ + DK+ T L+ + + K+R+++PNSS G +IGK+GA +K I
Sbjct: 581 VIESIQDKIRNTALYHK----NTSRGNKIRIMMPNSSAGIVIGKSGANMKDIRKQFGCQI 636
Query: 156 KI 157
K+
Sbjct: 637 KV 638
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 54/208 (25%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+++++P S+ G+IIGKAG + S + + I+IS+ + +Y G ++R+ + G L+ M
Sbjct: 521 IKILIPPSAVGAIIGKAGEAMHSLKNGNNCRIQISKNNETYLGTSERICLVKGRLNNIMA 580
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+E I K+ LY + +
Sbjct: 581 VIESIQDKIRNTALYHKNTS---------------------------------------- 600
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
R N + I + + G V+G+ G N+ +I + G +IKV + +
Sbjct: 601 -----------RGNKIRIMMPNSSAGIVIGKSGANMKDIRKQFGCQIKVYPKARSVKAKT 649
Query: 304 --ERKVTISGPQR-SIRTAESMIMQKVA 328
ER VT++ + ++ A S +++KVA
Sbjct: 650 SLERVVTVAHEESAALLQAASRVLEKVA 677
>gi|226506792|ref|NP_001146241.1| uncharacterized protein LOC100279814 [Zea mays]
gi|219886335|gb|ACL53542.1| unknown [Zea mays]
gi|413926084|gb|AFW66016.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 692
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 110/250 (44%), Gaps = 36/250 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGK G TI Q QSGA+IQ++R HE PG R + +SG ++I +A
Sbjct: 142 KIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQISKA 201
Query: 98 VDLVIDKLLTELHAED----------QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
L I ++L E A A G +T ++ + N+ G IIGK G TIKS
Sbjct: 202 EQL-IKEVLAEADAGSSGAGSGGRKYNATQPGAET-FQMKIANNKVGLIIGKGGETIKSM 259
Query: 148 MDDSQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+S A I++ L H G +R V + GT EQ+ A + ++ +++ + M+
Sbjct: 260 QANSGARIQVIPL-HLPAGDTSTERTVHIDGT-QEQIEAAKQLISEVTSENRARNPMSGG 317
Query: 206 YTYAGVFF----------------SGFHGMPYGAVP--PPVPAVPHNTAAHYGPNMGGRK 247
Y+ G G+ M GA P PP P Y P GG
Sbjct: 318 YSQQGYRPPRPQSNWGPPSVPPQQPGYGYMQPGAYPGAPPQYGAPQQPYGSYPPTSGG-- 375
Query: 248 FQNNKDDRTN 257
+Q D N
Sbjct: 376 YQTGWDQSQN 385
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T ++ +PN G IIGKAG TI+ S A I+++R + G R V L+G ++
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQI 198
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
+A +LI L+E S
Sbjct: 199 SKAEQLIKEVLAEADAGSSGAG-------------------------------------- 220
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV----SDRGD 297
GGRK+ N + + +A+ +G ++G+GG I + SGARI+V GD
Sbjct: 221 -SGGRKY-NATQPGAETFQMKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLHLPAGD 278
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQ 325
++ER V I G Q I A+ +I +
Sbjct: 279 T---STERTVHIDGTQEQIEAAKQLISE 303
>gi|116180584|ref|XP_001220141.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185217|gb|EAQ92685.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 485
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+P A +IGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 126 HVRAVISSPEAATIIGKGGENVSKIRQMSGAKCTVS---DYQKGAVERILTVSGIVDAVA 182
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E E + T LRL++P+ GSIIGK GA IK + S A +
Sbjct: 183 KAFGLIIRTLNNEPLGEPSSQHSKT-YPLRLLIPHILIGSIIGKGGARIKEIQEASGARL 241
Query: 156 KIS 158
S
Sbjct: 242 NAS 244
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 189 IRTLNNEPLGEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDS-- 246
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 247 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 281
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 226 PPVPAVPHNTAAHYG-PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQ 284
P PA PH A +G P GG + I + ++ +G ++G+GG+ I EI Q
Sbjct: 383 PAGPAGPHGPAGPHGQPMPGGAAVPGGPLTQQ----IYIPNDMVGAIIGKGGQKINEIRQ 438
Query: 285 ISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
ISG+ IK+++ D ++ER VTI+G + R A M+ ++ R+
Sbjct: 439 ISGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKHRI 485
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 414 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGTEECNRM 469
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 470 ALYMLYSRLESE 481
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 410 PLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEEC 466
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 467 NRMALYMLYSRLESEKH 483
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
++G+GG N+ +I Q+SGA+ VS D+ G ER +T+SG
Sbjct: 139 IIGKGGENVSKIRQMSGAKCTVS---DYQKGAVERILTVSG 176
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 137/307 (44%), Gaps = 65/307 (21%)
Query: 49 VIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DEILRAVDLVIDKL 105
VIGKGGSTI + SG+ I+++ S G + +I+++ T D AV+ V+ L
Sbjct: 325 VIGKGGSTIKRIRETSGSCIEVNDSRTKC-GDDECVIIVTATESPDDMKSMAVEAVL--L 381
Query: 106 LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYY 165
L E ++ A+ K K++L V + G +IGK+G+ I + A I IS+
Sbjct: 382 LQEYINDEDAE----KVKMQLFVSSKDIGCVIGKSGSVINEIRKRTNANICISK------ 431
Query: 166 GLNDRLVTLTGTLDEQMRALELILLKLSEDTL------------------YS-------Q 200
G D LV + G + A+ I+L+L ED L YS
Sbjct: 432 GKKDDLVEVAGEISSVRNAIIQIVLRLREDVLGDRDSVAASRKPPARTDNYSLFSGSSNA 491
Query: 201 TMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLT 260
T+P + SGFHG YG+ P N P GR +++L
Sbjct: 492 GYTLPSFMSSASSSGFHG--YGSFP-----AGDNVFGSVSPYSFGRL------PSSSALE 538
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSD----RGDFFSGTSERKVTISGPQRSI 316
I + + V+G+GG N+ I +ISGA I++SD +GD + +SG +
Sbjct: 539 ILIPANAMSKVMGKGGGNLENIRRISGAMIEISDSKTSQGDHIA-------LLSGTLEQM 591
Query: 317 RTAESMI 323
R AE+++
Sbjct: 592 RCAENLV 598
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 127/322 (39%), Gaps = 79/322 (24%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE---- 93
R L + G VIGK G IN + + A+I++ + G + R+I I ++ E
Sbjct: 41 RILCPIDVVGGVIGKSGKVINAIRHNTKAKIKV---FDQLHGCSQRVITIYCSVKEKKEE 97
Query: 94 -----------ILRAVDLVIDKLLTELHAEDQAD---DVGTKTKLRLIVPNSSCGSIIGK 139
+ A D ++ K+ + A D+ + D K + L+VP+S S+IGK
Sbjct: 98 EIDFMKSETEPLCCAQDALL-KVYDAIVASDEENIKIDRDDKKECLLLVPSSQSFSLIGK 156
Query: 140 AGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRALELILLK 191
AG IK ++A +K+ D H D +V ++G ++ + + A+ IL K
Sbjct: 157 AGENIKRIRSTTRASVKVVSKDVSDPSHVCAMDYDNIVVISGEPESVKKALFAVSAILYK 216
Query: 192 L-------------------------------------SEDTLYSQTMTVPYTYAGVFFS 214
+ ++D + Q VP + + S
Sbjct: 217 INPREHIPLDSTGQDVPASIIVSSDLSNSVYPQTGFYSNQDHILQQRAGVPSYFNALSVS 276
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVAD--EHIGFVV 272
F G A P+P + +G GG R+ L + V +I V+
Sbjct: 277 NFQGYAETAA-NPMPVFASSLPVTHG--FGG-------SSRSKELVLKVLCPLSNITRVI 326
Query: 273 GRGGRNIMEISQISGARIKVSD 294
G+GG I I + SG+ I+V+D
Sbjct: 327 GKGGSTIKRIRETSGSCIEVND 348
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
+D + ++ VS+ G VIGK GS IN+ + ++ A I +S+ G D ++ +
Sbjct: 387 NDEDAEKVKMQLFVSSKDIGCVIGKSGSVINEIRKRTNANICISK------GKKDDLVEV 440
Query: 88 SGTIDEILRAVDLVIDKL 105
+G I + A+ ++ +L
Sbjct: 441 AGEISSVRNAIIQIVLRL 458
>gi|148223980|ref|NP_001082843.1| uncharacterized protein LOC557028 [Danio rerio]
gi|94732695|emb|CAK10813.1| novel protein similar to human IGF-II mRNA-binding protein 2
(IMP-2) [Danio rerio]
gi|167614340|gb|ABZ89742.1| IGF-II mRNA-binding protein 2b variant 1 [Danio rerio]
gi|167614342|gb|ABZ89743.1| IGF-II mRNA-binding protein 2b variant 2 [Danio rerio]
Length = 436
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 146/313 (46%), Gaps = 34/313 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +++ + R G T++ I I + + +
Sbjct: 31 LRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKEN--AGATEKAITIHSSKEGCSQ 88
Query: 97 AVDLVIDKLLTELHAEDQADD--VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++++ + E +A+D + + L+++ NS G +IGK G +K D+
Sbjct: 89 ACRMILEIM------EKEANDTKIVEEVPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTK 142
Query: 155 IKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP-- 205
I IS L D + Y +R +++ G ++E +A I+ KL E ++ QT +
Sbjct: 143 ITISALQDLTVYN-QERTISVRGGVEECCKAEGEIMKKLREAHENDVASVNQQTNMMAGL 201
Query: 206 -YTYAGVFFSGFHGMP-----YGAVPPPV---PAV-PHNTAAHYG-PNMGGRKFQNNKDD 254
+ G+F SG +P G++ P P + P YG P+ G Q +
Sbjct: 202 NLSALGIFSSGMSVLPPASGLRGSLSTPANYSPLLGPSIMGGLYGVPSSGALSLQQAGGE 261
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
+ + + + +G ++G+ G++I E++ +GA IK++ ER V I+GP
Sbjct: 262 Q-EVVYLFIPTPAVGALIGKKGQHIKELAHFAGASIKIA--APESPDEPERMVIITGPPE 318
Query: 315 SIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 319 AQFKAQGRIYGKL 331
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 54/209 (25%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TIK+ +Q+ + I R +++ G ++ +T+ + + +
Sbjct: 31 LRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENA--GATEKAITIHSSKEGCSQ 88
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL + ++ ++ V VP AH
Sbjct: 89 ACRMILEIMEKEANDTKI--------------------------VEEVPLKILAH----- 117
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NSL +G ++G+ GRN+ +I Q +G +I +S D
Sbjct: 118 -------------NSL--------VGRLIGKEGRNLKKIEQDTGTKITISALQDLTVYNQ 156
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASD 332
ER +++ G AE IM+K+ A +
Sbjct: 157 ERTISVRGGVEECCKAEGEIMKKLREAHE 185
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + P GA+IGK G I + +GA I+++ P +R+++I+G + +
Sbjct: 265 VYLFIPTPAVGALIGKKGQHIKELAHFAGASIKIAAPES--PDEPERMVIITGPPEAQFK 322
Query: 97 AVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A + KL E A+++ K + + VP+++ G +IGK G T+ + + A
Sbjct: 323 AQGRIYGKLKEENFFTAKEE-----VKLEAHIKVPSTAAGRVIGKGGKTVNELQNLTSAE 377
Query: 155 IKISRLDHSYYGLNDRLVTLTG 176
+ + R D + +D V + G
Sbjct: 378 VIVPR-DQTPDENDDVFVKIIG 398
>gi|367027192|ref|XP_003662880.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
gi|347010149|gb|AEO57635.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
Length = 374
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 134/310 (43%), Gaps = 38/310 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ ISG + I R
Sbjct: 52 LRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSK---VVQGVYDRVLTISGGCEAISR 108
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A +V LL + + GT ++L++ ++ G+IIG+ G IK D S
Sbjct: 109 AYSVVARSLLEGAPTMGMGGVIQNNGTH-PIKLLISHNQMGTIIGRQGLKIKYIQDVSGV 167
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT---- 207
+ V + L S +R+V + GT + RA+ I L +D T TV Y
Sbjct: 168 RMVAQKEMLPQS----TERIVEVQGTPEGIQRAVWEICKCLVDD-WQRGTGTVLYNPVVR 222
Query: 208 YAGVFFSGFHG--------MPYG----------AVPPPVPAVPHNTAAHYGPNMGGRKFQ 249
GV G G PYG A + P+ + P G
Sbjct: 223 TQGVGAPGISGGSSYMQDRAPYGGSRVTRTGNGADFSGGGSRPYTRRSDSDPAARGPPTH 282
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
+ + + I + + +G ++GR G I EI + SGARI ++ T ER TI
Sbjct: 283 DENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAK--APHDETGERMFTI 340
Query: 310 SGPQRSIRTA 319
G ++ TA
Sbjct: 341 MGSAKANETA 350
>gi|326433287|gb|EGD78857.1| hypothetical protein PTSG_01835 [Salpingoeca sp. ATCC 50818]
Length = 507
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 35/188 (18%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P S + D TE+ +I+FL +N G +IG+GG+TI D Q + + I++S + E +PGT
Sbjct: 48 PPPSAARDDTEQ-MHIKFLATNGQCGMLIGRGGATIKDLQDSTHSYIKISHNSELYPGTA 106
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT------------------- 122
DR++ + +L A+ +++ ++ Q G+ T
Sbjct: 107 DRLVSVQARPQHLLNALLAILE--CANARSDPQQQGAGSTTPGTPQNSNHQQAQDQAQDQ 164
Query: 123 -------------KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
++L++P + G I+G+ G TI++ + A I +S+ L +
Sbjct: 165 VQQQQQQQGPRSISVKLVIPVVAAGLILGRGGETIRTMQTECDAYIHMSQRHEVPPALQE 224
Query: 170 RLVTLTGT 177
R+VT+ T
Sbjct: 225 RIVTINCT 232
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 18/196 (9%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A D + ++ + N CG +IG+ GATIK D + + IKIS Y G DRLV++
Sbjct: 53 ARDDTEQMHIKFLATNGQCGMLIGRGGATIKDLQDSTHSYIKISHNSELYPGTADRLVSV 112
Query: 175 TGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHN 234
+ AL L +L+ + Q G+ P P ++
Sbjct: 113 QARPQHLLNAL-LAILECANARSDPQQQGA-----------------GSTTPGTPQNSNH 154
Query: 235 TAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD 294
A ++ Q + R+ S+ + + G ++GRGG I + A I +S
Sbjct: 155 QQAQDQAQDQVQQQQQQQGPRSISVKLVIPVVAAGLILGRGGETIRTMQTECDAYIHMSQ 214
Query: 295 RGDFFSGTSERKVTIS 310
R + ER VTI+
Sbjct: 215 RHEVPPALQERIVTIN 230
>gi|426258298|ref|XP_004022751.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
Length = 330
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 153/376 (40%), Gaps = 91/376 (24%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 5 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 64
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 65 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 119
Query: 107 -----TELHAEDQADDV---------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + +LRL++ S G IIG GA IK +++Q
Sbjct: 120 SPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 179
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYSQT 201
IK+ DR+V + G D + +++IL +SE Y +T
Sbjct: 180 TTIKL--FQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET 237
Query: 202 MTVPYTYAG--VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSL 259
Y Y G + F G P G P M GR
Sbjct: 238 ----YDYGGFTMMFDDRRGRPVG-FP-----------------MRGR------------- 262
Query: 260 TIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTA 319
++ G ++G+GG+ I +I SGA IK+ + G+ +R +TI+G Q I+ A
Sbjct: 263 -----EDLAGSIIGKGGQRIKQIRHESGASIKIDEP---LEGSEDRIITITGTQDQIQNA 314
Query: 320 ESMIMQKVAYASDRLM 335
+ ++ V S +
Sbjct: 315 QYLLQNSVKQYSGKFF 330
>gi|354542879|emb|CCE39597.1| hypothetical protein CPAR2_600100 [Candida parapsilosis]
Length = 607
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 94/177 (53%), Gaps = 19/177 (10%)
Query: 12 PDVHGKRS----TAPVKSLSSDPTEKPTYIRFLVSNPL--AGAVIGKGGSTINDFQSQSG 65
P H + S + P SL D P+Y+ F + P+ A V+GKGG+ IN + ++
Sbjct: 184 PQQHHEESIEATSNPTSSLQ-DFESDPSYVSFRMYCPVKEASTVVGKGGAKINHLREKAQ 242
Query: 66 ARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KL 124
+IQ+S + + P +RII + GT + + +A L++ +L E ED+ ++ ++ L
Sbjct: 243 VKIQISENLKDVP---ERIITVKGTAENVAKAFGLIVRTILGE--PEDEPANLNSQQYNL 297
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLD 179
+L++PN G IIGK G + ++S A +K + L HS DR++++ G D
Sbjct: 298 KLLIPNVIIGHIIGKQGLKFREIEENSAAKLKAAESPLPHS----TDRVLSVLGVAD 350
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV---IKISRLDHSYYG-----LNDR 170
G K + V NSS GS+IGK G IK ++S I+ R G N R
Sbjct: 517 GDKYNQDIFVANSSIGSVIGKGGNNIKHIRENSGCTYVRIEPDRGQSIMLGGGRGLTNIR 576
Query: 171 LVTLTGTLDEQMRALELILLKLSED 195
+TLTG+L+ +A+ LI +++ D
Sbjct: 577 RLTLTGSLESFQKAIYLINQRINTD 601
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 141/313 (45%), Gaps = 31/313 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V GA+IGK G TI + Q+ +++ + R G ++ I I T +
Sbjct: 199 LRIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCSA 256
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E + +D+ L++I N+ G +IGK G +K +++ I
Sbjct: 257 ACRMIMEIMQKEANETKAMEDI----PLKIIASNNYIGRLIGKQGRNLKKIEEETGTKIT 312
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YT 207
IS L N+R +T+ G+L+ A I+ KL E + QT +P
Sbjct: 313 ISSLQDLNIYNNERTITVKGSLEACCNAEVEIMKKLREAYENDIAAINQQTSLIPGLNLN 372
Query: 208 YAGVFFSGFHGMPYGAVP----PPV------PAVPHNT--AAHYG-PNMGGRKFQNNKDD 254
G+F S + A P PPV P + H++ ++ YG P Q+ +
Sbjct: 373 ALGIFSSTLPVLSPAAGPRSTMPPVGPAGYNPFLGHSSHLSSLYGVPPASAIPHQHAAQE 432
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
+ + + + +G ++G+ G++I +++ +GA IKV+ +ER V I+G
Sbjct: 433 QEVAYLF-IPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAE--MPDATERMVIITGTPE 489
Query: 315 SIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 490 AQFKAQGRIFGKL 502
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P T+R+++I+GT + +A + KL
Sbjct: 446 GALIGKKGQHIKQLAHFAGASIKVAPAE--MPDATERMVIITGTPEAQFKAQGRIFGKLK 503
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V +T ++ VP+++ G +IGK G T+ + A + + R D +
Sbjct: 504 EE-NIFTGKEEVRLETHIK--VPSTAAGRVIGKGGKTVNELQSLTSAEVIVPR-DQTPDE 559
Query: 167 LNDRLVTLTG 176
N+ +V + G
Sbjct: 560 KNEVVVKICG 569
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
L I ++ +IG ++G+ GRN+ +I + +G +I +S D +ER +T+ G +
Sbjct: 280 LKIIASNNYIGRLIGKQGRNLKKIEEETGTKITISSLQDLNIYNNERTITVKGSLEACCN 339
Query: 319 AESMIMQKV--AYASD 332
AE IM+K+ AY +D
Sbjct: 340 AEVEIMKKLREAYEND 355
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G++IGK G IK + A IK++ + +R+V +TGT + Q +A
Sbjct: 438 LFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMP--DATERMVIITGTPEAQFKAQ 495
Query: 186 ELILLKLSEDTLYS--------QTMTVPYTYAG 210
I KL E+ +++ + VP T AG
Sbjct: 496 GRIFGKLKEENIFTGKEEVRLETHIKVPSTAAG 528
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
T+ LR+IVP G+IIGK G TIK+ +Q+ + I R +++ G ++ +T+ T +
Sbjct: 195 TQQDLRIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKENA--GAAEKPITIHSTPE 252
Query: 180 EQMRALELILLKLSEDTLYSQTM 202
A +I+ + ++ ++ M
Sbjct: 253 GCSAACRMIMEIMQKEANETKAM 275
>gi|156051102|ref|XP_001591512.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980]
gi|154704736|gb|EDO04475.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 371
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 147/342 (42%), Gaps = 45/342 (13%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P+ + E +R +VS+ AG +IGKGG + D + ++G + +S+ G
Sbjct: 37 PLPKTDEEYAESQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVH 93
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
DR++ ISG D I RA +V LL ++ + GT ++L++ ++ G+IIG
Sbjct: 94 DRVLTISGGCDSISRAYSIVAKALLEGAPQMGMGGVVSNNGTHP-IKLLISHNQMGTIIG 152
Query: 139 KAGATIKSFMDDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED- 195
+ G IK D S + V + L S +R+V + G + +A+ I L +D
Sbjct: 153 RQGLKIKHIQDVSGVRMVAQKEMLPQS----TERIVEVQGNPEGIQKAVWEICKCLVDDW 208
Query: 196 ------TLYSQTMTVPYTYAGVFFSGF---HGMPYGA---------------VPPPVPAV 231
LY+ + +G G G YG+ P
Sbjct: 209 ARGTGTVLYNPVVRTQTGGSGGMSQGNLGGTGREYGSSRVMRTGNGADFSEGAPRSYNRR 268
Query: 232 PHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIK 291
+ AA GP +N ++ +T +++I + +G ++GR G I EI + SGARI
Sbjct: 269 SDSDAAQRGPPT---HDENGEELQTQNISI--PSDMVGCIIGRAGSKISEIRKTSGARIS 323
Query: 292 VSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
++ T ER TI G ++ +A ++ + + R
Sbjct: 324 IAK--SPHDETGERMFTIMGTAKANDSALYLLYENLEAEKQR 363
>gi|426217762|ref|XP_004003121.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Ovis aries]
Length = 556
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAANTHSGYFSSL 366
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+G P H+ H P + + + + +G ++G+
Sbjct: 367 CPPHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 403
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 404 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 453
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAANTHSGYFSSLCPPHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACASAEIEIMKKLREAFENDML 354
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|224001814|ref|XP_002290579.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974001|gb|EED92331.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 649
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G VIGKGG I D Q++SG RI + ++ P RII GT + I A L+ +L
Sbjct: 245 GRVIGKGGEMIRDLQARSGCRIDVDQN---VPEGAPRIITYRGTRNAIDFAKQLI--SIL 299
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
H ++ +G K ++VP++ G IIG+ G I+ S A I++ DHS G
Sbjct: 300 CTEHGKEAELPLGQAMKKLVLVPSTVIGKIIGRGGEMIRELQSKSMAKIQV---DHSGAG 356
Query: 167 LN--DRLVTLTGTLDEQMRALELILL 190
++ R +T+TGT ++A E+IL
Sbjct: 357 MDSQQRQITVTGTTQAVIKAEEMILF 382
>gi|326925691|ref|XP_003209044.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Meleagris gallopavo]
Length = 502
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 33/310 (10%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P + +R LV GA+IGK G TI + Q+ +++ + R G ++ I I
Sbjct: 112 SQPKQLDFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENA--GAAEKPITI 169
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
T + A +++D + E A+++ L+++ NS G +IGK G +K
Sbjct: 170 HATPEGCSEACRMILDIMQKEADETKSAEEI----PLKILAHNSLVGRLIGKEGRNLKKI 225
Query: 148 MDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQ 200
D+ I IS L D + Y +R +T+ G+ + A I+ KL E + Q
Sbjct: 226 EQDTGTKITISPLQDLTIYN-PERTITVKGSTEACSNAEVEIMKKLREAYENDIVAVNQQ 284
Query: 201 TMTVP---YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN 257
+P + G+F +G +P V A AA Y P F + + N
Sbjct: 285 ANLIPGLNLSALGIFSTGLSMLPSS-----VGARGAAAAAPYHP------FALPEQEVVN 333
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + +G ++G+ G++I ++++ +GA IK++ +ER V I+GP +
Sbjct: 334 ---LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEG--PDATERMVIITGPPEAQF 388
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 389 KAQGRIFGKL 398
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TIK+ +Q+ + I R +++ G ++ +T+ T +
Sbjct: 121 LRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSE 178
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL + ++ +++ +P AH
Sbjct: 179 ACRMILDIMQKEADETKSAE--------------------------EIPLKILAH----- 207
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NSL +G ++G+ GRN+ +I Q +G +I +S D
Sbjct: 208 -------------NSL--------VGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNP 246
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+K+ AY +D
Sbjct: 247 ERTITVKGSTEACSNAEVEIMKKLREAYEND 277
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G I +GA I+++ + P T+R+++I+G + +
Sbjct: 332 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAE--GPDATERMVIITGPPEAQFK 389
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + K + + VP+ + G +IGK G T+ + + A +
Sbjct: 390 AQGRIFGKLKEENFFNPKEE---VKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVI 446
Query: 157 ISR 159
+ R
Sbjct: 447 VPR 449
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 47/207 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + +G +I +S + +R I + G+ +
Sbjct: 202 LKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTITVKGSTEACSN 261
Query: 97 AVDLVIDKLLTELHAED------QAD---------------------------------- 116
A ++ I K L E + D QA+
Sbjct: 262 A-EVEIMKKLREAYENDIVAVNQQANLIPGLNLSALGIFSTGLSMLPSSVGARGAAAAAP 320
Query: 117 ----DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ + + L +P + G+IIGK G IK + A IKI+ + +R+V
Sbjct: 321 YHPFALPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGP--DATERMV 378
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
+TG + Q +A I KL E+ ++
Sbjct: 379 IITGPPEAQFKAQGRIFGKLKEENFFN 405
>gi|389630232|ref|XP_003712769.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|351645101|gb|EHA52962.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|440469705|gb|ELQ38806.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482607|gb|ELQ63080.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 370
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 132/311 (42%), Gaps = 38/311 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G + I +
Sbjct: 48 VRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGGCEGISK 104
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL + V ++L++ ++ G+IIG+ G IK D S +
Sbjct: 105 AYAVVARALLEGAPSMGMGGVVSNNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVR 164
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT----- 207
V + L S +R+V + GT + RA+ I L +D T TV Y
Sbjct: 165 MVAQKEMLPQS----TERVVEVQGTPEGIQRAVWEICKCLIDD-WQRGTGTVLYNPVVRT 219
Query: 208 -YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP---NMGGRKFQNNKD---------- 253
AG G G YG + T G N GGR + D
Sbjct: 220 QPAGATQMGSSGAGYGTSNRGDYSSSRVTRTGNGADFSNGGGRSYNRRSDSDAANRGPPT 279
Query: 254 -----DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + I + + +G ++GR G I EI + SGARI ++ T ER T
Sbjct: 280 HDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA--PHDETGERMFT 337
Query: 309 ISGPQRSIRTA 319
I G ++ TA
Sbjct: 338 IMGSAKANETA 348
>gi|219116252|ref|XP_002178921.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409688|gb|EEC49619.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 699
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 126/314 (40%), Gaps = 77/314 (24%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
LV + G +IG+GG I Q+Q+G ++Q+ + HE PG T R I++ G E + A
Sbjct: 252 EILVPTGVVGFIIGRGGENITAMQAQTGVKVQIQKEHELVPGQTTRTILLQGATQESIDA 311
Query: 98 VDLVIDKLLTEL---HAEDQADDVGT----------KTKLRLI---------VPNSSCGS 135
+I+ + E + +Q+ G K ++ L VP++ G
Sbjct: 312 CKRIIEAKVQERVRSYNANQSSLQGATGLGGSGKDPKVEMALAAGHQLVEVQVPDADVGL 371
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
IIGK GATIK + A +++ H+ G RL+ +T E + ++ +L +
Sbjct: 372 IIGKMGATIKHIQATTGAAVQVP---HAVPGEATRLLQITHPSREGAEQAKRMVQELLDS 428
Query: 196 TLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDR 255
++ Q QN +
Sbjct: 429 KIHHQ------------------------------------------------QNEAPSQ 440
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
T S+ + + D +G +GR G I + ++ RI++ + G + R T++G
Sbjct: 441 T-SVEVNIPDRDVGLCIGRQGCVIRHMQSVTNTRIQIPSQP--MPGHTYRVATVTGTPEG 497
Query: 316 IRTAESMIMQKVAY 329
A++M M+++++
Sbjct: 498 CAEAKAM-MERISH 510
>gi|367019960|ref|XP_003659265.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
gi|347006532|gb|AEO54020.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
Length = 482
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+P A +IGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 124 HVRAVISSPEAATIIGKGGENVSKIRQMSGAKCTVS---DYQKGAVERILTVSGIVDAVA 180
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E E + T LRL++P+ GSIIGK GA IK + S A +
Sbjct: 181 KAFGLIIRTLNNEPLNEPSSQHSKT-YPLRLLIPHILIGSIIGKGGARIKEIQEASGARL 239
Query: 156 KIS 158
S
Sbjct: 240 NAS 242
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 187 IRTLNNEPLNEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDS-- 244
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 245 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 279
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Query: 219 MPYGAVPPPV----PAVPHNTAAHYGPNMG----GRKFQNNKDDRTNSLT--IGVADEHI 268
MPYGA P P V + H GP++ G+ LT I + ++ +
Sbjct: 360 MPYGAHPAAAYGAGPHVQPHPVGHAGPHVATGPHGQPMPGAAHVPGAPLTQQIYIPNDMV 419
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG+ I EI QISG+ IK+++ D ++ER VTI+G + R A M+ ++
Sbjct: 420 GAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLYSRLE 476
Query: 329 YASDRL 334
R+
Sbjct: 477 SEKHRI 482
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 405 GAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGT 460
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 461 EECNRMALYMLYSRLESE 478
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 407 PLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEEC 463
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 464 NRMALYMLYSRLESEKH 480
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
++G+GG N+ +I Q+SGA+ VS D+ G ER +T+SG
Sbjct: 137 IIGKGGENVSKIRQMSGAKCTVS---DYQKGAVERILTVSG 174
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 145/334 (43%), Gaps = 43/334 (12%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V +L ++ R + SN GAVIGKGGS + Q++SGA I + S D
Sbjct: 101 VSALDPKAYQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPS---LVECED 157
Query: 83 RIIMISG------TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK----LRLIVPNSS 132
R++ I+ T +AV LV K + ++ ++G+K + RL+VP++
Sbjct: 158 RLVTITASENPESTYSPAQKAVVLVFSKSVEA--GVEKGLELGSKKEPYVTARLVVPSNQ 215
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL--NDRLVTLTGTLDEQMRALELILL 190
G ++GK GA + + A I++ D + ND+LV ++G A+
Sbjct: 216 VGCLLGKGGAIVSEMRKATGANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATG 275
Query: 191 KLSEDTLYS-QTMTVPYTYAGVFFSG-----------FHGMPYGAVPPPVPAVPHNTAAH 238
+L + S Q + + V G H +P P V + N+
Sbjct: 276 RLRDHLFVSTQNSGGARSLSSVLAGGQPTLAISHSLNRHSLPGLQAPQTVAGI--NSRGT 333
Query: 239 YGPNMG--GRK--FQNNKDDRTNSLT-----IGVADEHIGFVVGRGGRNIMEISQISGAR 289
G + G RK + +T +T I V D+ IG V G G N+ + QISGA+
Sbjct: 334 NGVSRGLISRKGGLELISGSKTAIVTNTTVQIVVPDDVIGSVYGENGSNLARLRQISGAK 393
Query: 290 IKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ V + GTS+R + ISG R A+S++
Sbjct: 394 VIVHEP---RPGTSDRTIIISGTPDETRAAQSLL 424
>gi|346979418|gb|EGY22870.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 477
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG +++ + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 116 HIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVS---DYQKGAVERILTVSGVVDASA 172
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E D+ +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 173 KAFGLIIRTLNNE--PLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 230
Query: 155 IKIS 158
+ S
Sbjct: 231 LNAS 234
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P ++P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 179 IRTLNNEPLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 236
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 237 CLPMSTERSLVVMGVADAVHIATYYVGSTLLEQLN 271
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I + ++ +G ++G+GG+ I EI QISG+ IK+++ D ++ER VTI+G + R A
Sbjct: 407 IFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTDETNRMAL 463
Query: 321 SMIMQKVAYASDRL 334
M+ ++ R+
Sbjct: 464 YMLYSRLESEKHRV 477
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 401 QPLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTDE 457
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 458 TNRMALYMLYSRLESEKH 475
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 406 QIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGTDETNRM 461
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 462 ALYMLYSRLESE 473
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 141/321 (43%), Gaps = 77/321 (23%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R L + + G+VIGK G IN + ++ ARI++ + FPG ++R+I I ++ E
Sbjct: 47 RILCPSGVMGSVIGKSGKVINLIRQETRARIKVV---DPFPGCSERVITIFCSVSEKKDI 103
Query: 98 VDLVIDKL------------LTELH----------AEDQADDVGTKTKLRLIVPNSSCGS 135
VD+ +L L ++H AE+ D + RL+VP+S C
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL---EL 187
+IGK+G+ IK+ ++A +K+ D H+ D +V ++G + +AL
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNIVMISGETESVKKALFAVSA 223
Query: 188 ILLKLSE------DTLYSQ---TMTVP-----YTYAGVF------------FSGFHG-MP 220
I+ K+S DT + ++ +P Y AG++ S F G +P
Sbjct: 224 IMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFIGTLP 283
Query: 221 YG-----AVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV--ADEHIGFVVG 273
G A P PV + H GG R+ L I V A IG V+G
Sbjct: 284 QGYGENAANPLPVFSASALPVVH---GFGG-------SSRSEKLAIKVICASSKIGRVIG 333
Query: 274 RGGRNIMEISQISGARIKVSD 294
+GG I I Q SG+ I+V+D
Sbjct: 334 KGGLTIKGIRQASGSHIEVND 354
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 13/166 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DE 93
I+ + ++ G VIGKGG TI + SG+ I+++ S D +I ++ T D
Sbjct: 319 IKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNH--DDDCVITVTATESPDDL 376
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
AV+ V LL + D+ +D K K++L+V + G IIGK+G+ I ++A
Sbjct: 377 KSMAVEAV---LLLQEKINDEDED---KVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKA 430
Query: 154 VIKISRLDHSYYGL--NDRLVTLTGTLDEQMRALELILLKLSEDTL 197
I IS+ +++ ND LV ++G + AL I+L+L +D L
Sbjct: 431 DIHISKGNNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDVL 476
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
++ ++ + + +G V+GRGG N+ I +ISGA I++SD + G R ISG
Sbjct: 572 QSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGG---RVALISGTSE 628
Query: 315 SIRTAESM 322
RTAE++
Sbjct: 629 QKRTAENL 636
>gi|302414660|ref|XP_003005162.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
gi|261356231|gb|EEY18659.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
Length = 478
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG +++ + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 116 HIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVS---DYQKGAVERILTVSGVVDASA 172
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E D+ +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 173 KAFGLIIRTLNNE--PLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 230
Query: 155 IKIS 158
+ S
Sbjct: 231 LNAS 234
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P ++P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 179 IRTLNNEPLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 236
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 237 CLPMSTERSLVVMGVADAVHIATYYVGSTLLEQLN 271
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 229 PAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
PA P H M G + + I + ++ +G ++G+GG+ I EI QISG+
Sbjct: 375 PAAPQPHGGHPAQPMHGGPAAGGMAGQPLTQQIFIPNDMVGAIIGKGGQKINEIRQISGS 434
Query: 289 RIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
IK+++ D ++ER VTI+G + R A M+ ++
Sbjct: 435 VIKINEPQD---NSNERLVTITGTDETNRMALYMLYSRL 470
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 406 QIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGTDETNRM 461
Query: 184 ALELILLKL 192
AL ++ +L
Sbjct: 462 ALYMLYSRL 470
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTE--KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARI 68
+P HG P+ + +P + + N + GA+IGKGG IN+ + SG+ I
Sbjct: 377 APQPHGGHPAQPMHGGPAAGGMAGQPLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVI 436
Query: 69 QLSRSHEFFPGTTDRIIMISGTIDEILR 96
+++ + + +R++ I+GT DE R
Sbjct: 437 KINEPQD---NSNERLVTITGT-DETNR 460
>gi|392597310|gb|EIW86632.1| cytoplasmic protein [Coniophora puteana RWD-64-598 SS2]
Length = 328
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 32/309 (10%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
+PD G RS +P P +R LVS AG +IGK G + D + Q+G + +
Sbjct: 8 NPDSAGSRSPSPA------PGNDTLTLRALVSTKEAGVIIGKAGKNVADLRDQTGVKAGV 61
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPN 130
S+ PG +R++ + G+++ + +A L+I +L+ T +RL++ +
Sbjct: 62 SK---VIPGVHERVLTVGGSVEAVAKAYTLIIAQLVESNPTSVSMSSPSPHTSIRLLISH 118
Query: 131 SSCGSIIGKAGATIKSFMDDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
+ G+IIG+ G IK+ D + + V L S +R+V + G + RA+E I
Sbjct: 119 NLMGTIIGRNGLKIKAIQDVTGVRMVAAKDMLPQS----TERIVEVQGAPESIGRAIEEI 174
Query: 189 LLKLSED------TLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
L ED T+ TV +G+ G +TA
Sbjct: 175 GKCLLEDWERGLGTVLYHPGTVDDRSGSKRTNGYAGGRRSN---------GDTAREQLSP 225
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
+ ++ + I + + +G ++GR G I EI ++SG++I ++ +G
Sbjct: 226 SSPQSPTSSPQTNLRTQNISIPSDMVGCIIGRSGTKITEIRRLSGSKISIAKVPHDETG- 284
Query: 303 SERKVTISG 311
ER TI G
Sbjct: 285 -ERMFTIIG 292
>gi|46117014|ref|XP_384525.1| hypothetical protein FG04349.1 [Gibberella zeae PH-1]
Length = 564
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 129/299 (43%), Gaps = 46/299 (15%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID---EILRAVDLV 101
L G +IG+ G + ++ S R+Q + PG R ISG E+ A++ +
Sbjct: 208 LVGLIIGRQGENLRRIEADSNCRVQFLAPTDGGPGPY-RQCKISGPRHRRGEVKEAINRI 266
Query: 102 I-DKLLTELHAEDQADDV--GTKTKLR-------LIVPNSSCGSIIGKAGATIKSFMDDS 151
I D + L+ ++ D G T LR ++VP+ + G IIG+ G TI+ + S
Sbjct: 267 IEDSGMGALNRPEKPRDPNKGGATALREGEDHMQIMVPDRTVGLIIGRGGETIRDLQERS 326
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGV 211
I I S GL R V L GT + RA + I+ + D+ V G
Sbjct: 327 GCHINIVGESKSVNGL--RPVNLIGTREAAARAKDFIMEIVDSDSRGDAPPPVKRLGGG- 383
Query: 212 FFSGFHGMPYGAVPPPVPAVPHNTAAHYGP---NMGGRKFQNNKDDRTNSLTIGVADEHI 268
G+ PP A H GP +MGG + +D + V + +
Sbjct: 384 ----------GSAPP---------ARHDGPQQRDMGGSGGPDKIND-----AVYVPSDAV 419
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I E+ +G +I V+ G ++R++ + G + SI A+ I +KV
Sbjct: 420 GMIIGKGGETIREMQNTTGCKINVAQ--SSGPGETQREIALIGSRDSIARAKQAIDEKV 476
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 30/187 (16%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ +V + G +IG+GG TI D Q +SG I + + G R + + GT
Sbjct: 294 EGEDHMQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGL--RPVNLIGTR 351
Query: 92 DEILRAVDLVIDKLLTE---------------------LHAEDQADDVG-----TKTKLR 125
+ RA D +++ + ++ H Q D+G K
Sbjct: 352 EAAARAKDFIMEIVDSDSRGDAPPPVKRLGGGGSAPPARHDGPQQRDMGGSGGPDKINDA 411
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VP+ + G IIGK G TI+ + + I +++ S G R + L G+ D RA
Sbjct: 412 VYVPSDAVGMIIGKGGETIREMQNTTGCKINVAQ--SSGPGETQREIALIGSRDSIARAK 469
Query: 186 ELILLKL 192
+ I K+
Sbjct: 470 QAIDEKV 476
>gi|448538474|ref|XP_003871504.1| Pbp2 RNA binding protein [Candida orthopsilosis Co 90-125]
gi|380355861|emb|CCG25380.1| Pbp2 RNA binding protein [Candida orthopsilosis]
Length = 579
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 19/179 (10%)
Query: 10 PSPDVHGKRS----TAPVKSLSSDPTEKPTYIRFLVSNPL--AGAVIGKGGSTINDFQSQ 63
P P H + S + PV S D P+Y+ F + P+ A V+GK G+ IN + +
Sbjct: 161 PEPQQHLEESAQATSNPVAS-QKDYESDPSYVSFRMYCPVKEASTVVGKQGAKINHLREK 219
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT- 122
+ +IQ+S + G +RII + GT + + RA L++ +L E ED ++ ++
Sbjct: 220 ADVKIQISDN---LRGVPERIITVRGTAENVARAFGLIVRTILGE--PEDVPANLSSQQY 274
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLD 179
L+L+VPN+ G IIGK G + ++S A +K + L HS DR++++ G D
Sbjct: 275 NLKLLVPNAIIGYIIGKQGLKFREIEENSAAKLKAAEQPLPHS----TDRVLSVLGVAD 329
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-QAVIKIS--RLDHSYYG-----LND 169
G K + V NSS GS+IGK G IK ++S + +KI R G N
Sbjct: 488 AGDKYNQDVFVANSSIGSVIGKGGNNIKHIRENSGCSYVKIEPDRGQSIMLGGGRGLTNI 547
Query: 170 RLVTLTGTLDEQMRALELILLKLSED 195
R +TLTG+L+ +A+ LI +++ D
Sbjct: 548 RRLTLTGSLESFQKAIYLINQRINAD 573
>gi|413926083|gb|AFW66015.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 317
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGK G TI Q QSGA+IQ++R HE PG R + +SG ++I
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQI 198
Query: 95 LRAVDLVIDKLLTELHAED----------QADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+A L I ++L E A A G +T ++ + N+ G IIGK G TI
Sbjct: 199 SKAEQL-IKEVLAEADAGSSGAGSGGRKYNATQPGAET-FQMKIANNKVGLIIGKGGETI 256
Query: 145 KSFMDDSQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
KS +S A I++ L H G +R V + GT ++ A +LI SE L S+ +
Sbjct: 257 KSMQANSGARIQVIPL-HLPAGDTSTERTVHIDGTQEQIEAAKQLISEVTSEVRLLSRCV 315
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T ++ +PN G IIGKAG TI+ S A I+++R + G R V L+G ++
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQI 198
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
+A +LI L+E S G Y A P
Sbjct: 199 SKAEQLIKEVLAEADAGSSGAGS------------GGRKYNATQP--------------- 231
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV----SDRGD 297
G FQ + +A+ +G ++G+GG I + SGARI+V GD
Sbjct: 232 --GAETFQ-----------MKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLHLPAGD 278
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQ 325
++ER V I G Q I A+ +I +
Sbjct: 279 T---STERTVHIDGTQEQIEAAKQLISE 303
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
S I + + +G ++G+ G I I SGA+I+V+ + G R+V +SG I
Sbjct: 140 SKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQIS 199
Query: 318 TAESMIMQKVA 328
AE +I + +A
Sbjct: 200 KAEQLIKEVLA 210
>gi|408388015|gb|EKJ67710.1| hypothetical protein FPSE_12081 [Fusarium pseudograminearum CS3096]
Length = 566
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 129/299 (43%), Gaps = 46/299 (15%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID---EILRAVDLV 101
L G +IG+ G + ++ S R+Q + PG R ISG E+ A++ +
Sbjct: 208 LVGLIIGRQGENLRRIEADSNCRVQFLAPTDGGPGPY-RQCKISGPRHRRGEVKEAINRI 266
Query: 102 I-DKLLTELHAEDQADDV--GTKTKLR-------LIVPNSSCGSIIGKAGATIKSFMDDS 151
I D + L+ ++ D G T LR ++VP+ + G IIG+ G TI+ + S
Sbjct: 267 IEDSGMGALNRPEKPRDPNKGGATALREGEDHMQIMVPDRTVGLIIGRGGETIRDLQERS 326
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGV 211
I I S GL R V L GT + RA + I+ + D+ V G
Sbjct: 327 GCHINIVGESKSVNGL--RPVNLIGTREAAARAKDFIMEIVDSDSRGDAPPPVKRLGGG- 383
Query: 212 FFSGFHGMPYGAVPPPVPAVPHNTAAHYGP---NMGGRKFQNNKDDRTNSLTIGVADEHI 268
G+ PP A H GP +MGG + +D + V + +
Sbjct: 384 ----------GSAPP---------ARHDGPQQRDMGGSGGPDKIND-----AVYVPSDAV 419
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G ++G+GG I E+ +G +I V+ G ++R++ + G + SI A+ I +KV
Sbjct: 420 GMIIGKGGETIREMQNTTGCKINVAQ--SSGPGETQREIALIGSRDSIARAKQAIDEKV 476
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 30/187 (16%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ +V + G +IG+GG TI D Q +SG I + + G R + + GT
Sbjct: 294 EGEDHMQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGL--RPVNLIGTR 351
Query: 92 DEILRAVDLVIDKLLTE---------------------LHAEDQADDVG-----TKTKLR 125
+ RA D +++ + ++ H Q D+G K
Sbjct: 352 EAAARAKDFIMEIVDSDSRGDAPPPVKRLGGGGSAPPARHDGPQQRDMGGSGGPDKINDA 411
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VP+ + G IIGK G TI+ + + I +++ S G R + L G+ D RA
Sbjct: 412 VYVPSDAVGMIIGKGGETIREMQNTTGCKINVAQ--SSGPGETQREIALIGSRDSIARAK 469
Query: 186 ELILLKL 192
+ I K+
Sbjct: 470 QAIDEKV 476
>gi|400603119|gb|EJP70717.1| KH domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 464
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 108 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGIVDAVA 164
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E A + +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 165 KAFGLIIRTLNNE--ALTETSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 222
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 223 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNERFGGPAASAYA 275
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P + YG
Sbjct: 276 TRSGAPAGSIPGGMQVVPYSPQPASGQYG 304
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 35 TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S P +++R +++ G D
Sbjct: 189 TYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS--CLPMSSERSLVVMGVADA 246
Query: 94 ILRAVDLVIDKLLTELH 110
+ A V LL +L+
Sbjct: 247 VHIATYYVGSTLLEQLN 263
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 393 QIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQDNS----NERLVTVTGTEECNRM 448
Query: 184 ALELILLKLSED 195
AL L+ +L +
Sbjct: 449 ALYLLYSRLDSE 460
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 16/114 (14%)
Query: 224 VPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN---SLTIGVADEHIGFVVGRGGRNIM 280
+PP A PH GG + QN + I + ++ +G ++G+GG+ I
Sbjct: 364 MPPHTGAQPH----------GGPQAQNMHAGMPGGPMTQQIYIPNDMVGAIIGKGGQKIN 413
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
EI Q+SG+ IK+++ D ++ER VT++G + R A ++ ++ R+
Sbjct: 414 EIRQLSGSVIKINEPQD---NSNERLVTVTGTEECNRMALYLLYSRLDSEKHRM 464
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ ++GT +
Sbjct: 389 PMTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQD---NSNERLVTVTGTEEC 445
Query: 94 ILRAVDLVIDKLLTELH 110
A+ L+ +L +E H
Sbjct: 446 NRMALYLLYSRLDSEKH 462
>gi|196049606|pdb|2JZX|A Chain A, Pcbp2 Kh1-Kh2 Domains
Length = 160
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 89/162 (54%), Gaps = 16/162 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 7 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 61
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 62 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 121
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLK 191
++++ L +S +R +T+ G ++ E ++ + +++L+
Sbjct: 122 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLE 159
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 53/193 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A R++ S +R++TL G + +
Sbjct: 7 IRLLMHGKEVGSIIGKKGESVKKMREESGA-----RINISEGNCPERIITLAGPTNAIFK 61
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I+ KL ED S +MT ++TAA P
Sbjct: 62 AFAMIIDKLEED--ISSSMT-----------------------------NSTAASRPP-- 88
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + V G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 89 -------------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNST 133
Query: 304 ERKVTISGPQRSI 316
ER +TI+G +SI
Sbjct: 134 ERAITIAGIPQSI 146
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 81 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 138
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 139 IAGIPQSIIECVKQICVVML 158
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 14 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 68
Query: 326 KV 327
K+
Sbjct: 69 KL 70
>gi|85109816|ref|XP_963102.1| hypothetical protein NCU06251 [Neurospora crassa OR74A]
gi|28924753|gb|EAA33866.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 371
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 136/326 (41%), Gaps = 45/326 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + + + ++G + +S+ G DR++ I+G D + +
Sbjct: 52 LRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSK---VVQGVHDRVLTITGGCDAVSK 108
Query: 97 AVDLVIDKLLTELHAEDQADDVGT--------KTKLRLIVPNSSCGSIIGKAGATIKSFM 148
A +V LL + A VG ++L++ ++ G++IG+ G IK
Sbjct: 109 AYAVVARSLL------EGAPSVGMGGVISANGTHPIKLLISHNQMGTVIGRQGLKIKHIQ 162
Query: 149 DDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
D S + V + L S +R+V + GT + RA+ I L +D T TV Y
Sbjct: 163 DVSGVRMVAQKEMLPQS----TERVVEVQGTPEGIQRAVWEICKCLVDD-WQRGTGTVLY 217
Query: 207 T----YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD--------- 253
G G P A + N GGR + D
Sbjct: 218 NPVVRGGGQPLGGDRNYPQERSYGSSRVTRTGNGADFSSNSGGRPYNRRSDSDAASRGPP 277
Query: 254 ------DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKV 307
+ + I + + +G ++GR G I EI + SGARI ++ SG ER
Sbjct: 278 THDENGEEIQTQNISIPADMVGCIIGRQGSKISEIRKASGARISIAKGPHDESG--ERMF 335
Query: 308 TISGPQRSIRTAESMIMQKVAYASDR 333
TI G ++ TA ++ + + R
Sbjct: 336 TIMGSAKANETALYLLYENLEAEKTR 361
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 75/200 (37%), Gaps = 51/200 (25%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
T LR IV + G IIGK G + + D++ +S++ G++DR++T+TG D
Sbjct: 48 TTLTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKV---VQGVHDRVLTITGGCD 104
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
V YA V S G P
Sbjct: 105 -----------------------AVSKAYAVVARSLLEGAPS------------------ 123
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
MGG N T+ + + ++ +G V+GR G I I +SG R+ +
Sbjct: 124 -VGMGGVISANG----THPIKLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQK--EML 176
Query: 300 SGTSERKVTISGPQRSIRTA 319
++ER V + G I+ A
Sbjct: 177 PQSTERVVEVQGTPEGIQRA 196
>gi|25144314|ref|NP_740869.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
gi|373218905|emb|CCD64191.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
Length = 397
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 138/351 (39%), Gaps = 79/351 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS+ AGA+IGKGG I +++ A +Q+ S+ T +R+ ++ +L
Sbjct: 52 VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSN-----TPERVCTVTADEKTVLN 106
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+ V+ +L D + +R++V S G++IG+ G+ IK + A +K
Sbjct: 107 ILKDVLPRLEDNFSERDPCE-------VRMLVHQSHAGALIGRNGSKIKELREKCSARLK 159
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY-SQTMTVP-YTYAGVFFS 214
I G DR++ +G + +E ++ +L E + S T +P + Y S
Sbjct: 160 I--FTGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPYLPAFNYDPSNIS 217
Query: 215 GFHGMP-----------------------------YGAV--------------------- 224
+ G P YG
Sbjct: 218 DYGGFPGNMPAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRSFEAGDFQQFRGG 277
Query: 225 PPPVPAVPHNTAAHYGPNMGGRKFQNN--------KDDRTNSLTIGVADEHIGFVVGRGG 276
P PVP +A Y P G NN + + + + G ++GRGG
Sbjct: 278 PGPVPGYAM-SAPGYPPQQGQFGAPNNAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGG 336
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
I I Q SGA+I + +G ER +TI G ++ I +A+ ++ Q V
Sbjct: 337 ERIARIRQESGAQITLEQS----NGQPERIITIKGTEQQIHSAQYLLQQCV 383
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R LV AGA+IG+ GS I + + + AR+++ PG+TDR+++ SG
Sbjct: 124 PCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTG--CAPGSTDRVLITSGEQKN 181
Query: 94 ILRAVDLVIDKL 105
+L ++ V+ +L
Sbjct: 182 VLGIIEEVMKEL 193
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + + L G +IG+GG I + +SGA+I L +S+ G +RII I GT +I
Sbjct: 317 TTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSN----GQPERIITIKGTEQQI 372
Query: 95 LRAVDLV 101
A L+
Sbjct: 373 HSAQYLL 379
>gi|223947067|gb|ACN27617.1| unknown [Zea mays]
gi|413926085|gb|AFW66017.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 704
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 85/169 (50%), Gaps = 15/169 (8%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGK G TI Q QSGA+IQ++R HE PG R + +SG ++I +A
Sbjct: 142 KIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQISKA 201
Query: 98 VDLVIDKLLTELHAED----------QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
L I ++L E A A G +T ++ + N+ G IIGK G TIKS
Sbjct: 202 EQL-IKEVLAEADAGSSGAGSGGRKYNATQPGAET-FQMKIANNKVGLIIGKGGETIKSM 259
Query: 148 MDDSQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSE 194
+S A I++ L H G +R V + GT ++ A +LI SE
Sbjct: 260 QANSGARIQVIPL-HLPAGDTSTERTVHIDGTQEQIEAAKQLISEVTSE 307
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T ++ +PN G IIGKAG TI+ S A I+++R + G R V L+G ++
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQI 198
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
+A +LI L+E S
Sbjct: 199 SKAEQLIKEVLAEADAGSSGAG-------------------------------------- 220
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV----SDRGD 297
GGRK+ N + + +A+ +G ++G+GG I + SGARI+V GD
Sbjct: 221 -SGGRKY-NATQPGAETFQMKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLHLPAGD 278
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQ 325
++ER V I G Q I A+ +I +
Sbjct: 279 T---STERTVHIDGTQEQIEAAKQLISE 303
>gi|213410260|ref|XP_002175900.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces japonicus yFS275]
gi|212003947|gb|EEB09607.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces japonicus yFS275]
Length = 381
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 30/287 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+S AG +IGK G + + +S + + ++++ P DR++ ISG+++ ++R
Sbjct: 88 LRALLSTREAGIIIGKSGKNVAELRSTTNVKAGITKA---VPNVHDRVLTISGSLENVVR 144
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A +ID +A D KLRL++ +S GSIIG+ G IK D +
Sbjct: 145 AYRFIIDIFAKNSTNANGTPVDPHAPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRM 204
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQT--MTV 204
S+ L S +R V + GT++ A+ I L +D Y+ +T
Sbjct: 205 IASKDMLPQS----TERTVEVHGTVENLHAAIWEIGKCLIDDWERGAGTVFYNPVSRLTQ 260
Query: 205 PYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA 264
P+ A+P P+ + A ++ P ++ + ++ I +
Sbjct: 261 PFPTVATSPRAVSQQMTPAIPSPM--MDGGAAPYFFPPAAPQQPRITQN-------ISIP 311
Query: 265 DEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
+ +G ++GR G I EI + SG++I ++ + T ER TI+G
Sbjct: 312 ADMVGCIIGRAGSKISEIRRSSGSKISIAK--EPHDETGERMFTITG 356
>gi|402221820|gb|EJU01888.1| hypothetical protein DACRYDRAFT_22325 [Dacryopinax sp. DJM-731 SS1]
Length = 355
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 143/326 (43%), Gaps = 66/326 (20%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S++P E T +R LVS AG +IGK G + D + +G + +S+ PG +R++
Sbjct: 21 SANPAEILT-LRALVSTKDAGIIIGKAGRNVADLRESTGVKAGVSK---VVPGVHERVLS 76
Query: 87 ISGTIDEILRAVDLVIDKLL-------TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
++G ++ + +A L+ +LL + + LRL++ ++ G++IG+
Sbjct: 77 VTGPVEAVAKAYTLIASQLLSPPAPPSPPQTPPPSPPNQASTLTLRLLISHNLMGTLIGR 136
Query: 140 AGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+G IKS D S +++ +R+V + G + RA+E + L ED
Sbjct: 137 SGLKIKSIQDASG--VRMVAAKEMLPQSTERVVEVIGDAESIGRAVEEVGRCLVED---- 190
Query: 200 QTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP----------NMGGRKFQ 249
GV +H P AV P + A+ H A+H P GR+
Sbjct: 191 -------WERGVGTVLYH--PGAAVDPSL-AMQHG-ASHVSPRRTNGQAPAFGTSGRRQS 239
Query: 250 ------------------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQI 285
N+ RT +++I + +G ++GRGG I EI ++
Sbjct: 240 IGQQTSLPAAAASVLAPASPTSNAGNQPIRTQNISI--PSDMVGCIIGRGGAKITEIRRL 297
Query: 286 SGARIKVSDRGDFFSGTSERKVTISG 311
SG++I ++ + +G ER TI+G
Sbjct: 298 SGSKISIAKQPHDETG--ERMFTITG 321
>gi|32564028|ref|NP_491825.2| Protein F26B1.2, isoform c [Caenorhabditis elegans]
gi|373218907|emb|CCD64193.1| Protein F26B1.2, isoform c [Caenorhabditis elegans]
Length = 380
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 138/351 (39%), Gaps = 79/351 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS+ AGA+IGKGG I +++ A +Q+ S+ T +R+ ++ +L
Sbjct: 35 VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSN-----TPERVCTVTADEKTVLN 89
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+ V+ +L D + +R++V S G++IG+ G+ IK + A +K
Sbjct: 90 ILKDVLPRLEDNFSERDPCE-------VRMLVHQSHAGALIGRNGSKIKELREKCSARLK 142
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY-SQTMTVP-YTYAGVFFS 214
I G DR++ +G + +E ++ +L E + S T +P + Y S
Sbjct: 143 I--FTGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPYLPAFNYDPSNIS 200
Query: 215 GFHGMP-----------------------------YGAV--------------------- 224
+ G P YG
Sbjct: 201 DYGGFPGNMPAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRSFEAGDFQQFRGG 260
Query: 225 PPPVPAVPHNTAAHYGPNMGGRKFQNN--------KDDRTNSLTIGVADEHIGFVVGRGG 276
P PVP +A Y P G NN + + + + G ++GRGG
Sbjct: 261 PGPVPGYAM-SAPGYPPQQGQFGAPNNAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGG 319
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
I I Q SGA+I + +G ER +TI G ++ I +A+ ++ Q V
Sbjct: 320 ERIARIRQESGAQITLEQS----NGQPERIITIKGTEQQIHSAQYLLQQCV 366
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R LV AGA+IG+ GS I + + + AR+++ PG+TDR+++ SG
Sbjct: 107 PCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTG--CAPGSTDRVLITSGEQKN 164
Query: 94 ILRAVDLVIDKL 105
+L ++ V+ +L
Sbjct: 165 VLGIIEEVMKEL 176
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + + L G +IG+GG I + +SGA+I L +S+ G +RII I GT +I
Sbjct: 300 TTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSN----GQPERIITIKGTEQQI 355
Query: 95 LRAVDLV 101
A L+
Sbjct: 356 HSAQYLL 362
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 19/170 (11%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
T R LV G++IG+ G I ++ ARI++ + PGTT+R +M+SG
Sbjct: 178 TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPPGTTERAVMVSGKEEPE 234
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
++D +LR ++D L E A V T RL+VP S GS+IGK G T+
Sbjct: 235 SSLPPSMDGLLRVHMRIVDGLDGEPSQAPPASKVST----RLLVPASQAGSLIGKQGGTV 290
Query: 145 KSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
K+ + S ++++ D + L +DR+V + G +ALELI L
Sbjct: 291 KAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHL 340
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 2 ETNESSYVPSPDVHGKRSTAPVKSLSSDPTEKP----TYIRFLVSNPLAGAVIGKGGSTI 57
E ESS PS D + V L +P++ P R LV AG++IGK G T+
Sbjct: 231 EEPESSLPPSMDGLLRVHMRIVDGLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTV 290
Query: 58 NDFQSQSGARIQLSRSHEF--FPGTTDRIIMISGTIDEILRAVDLVIDKL 105
Q S +++ S + F DR++ + G + +A++L+ L
Sbjct: 291 KAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHL 340
>gi|124021196|gb|ABM88866.1| IGF2 mRNA-binding protein 1 [Danio rerio]
Length = 598
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 31/318 (9%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P + S +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 182 RQMSPGSGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 240
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + A ++++ + E AD+V L+++ N+ G +I
Sbjct: 241 -GAAEKPISIHSTPEGCSAACRMILEIMNQEAKDTKTADEV----PLKVLAHNNFVGRLI 295
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE--- 194
GK G +K D+ I IS L +R +T+ G+++ A + I+ K+ E
Sbjct: 296 GKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCLAEQEIMKKVREAYD 355
Query: 195 ---DTLYSQTMTVPYTYAGV--FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQ 249
+ QT +P G F MP A+ VP P YGP MG
Sbjct: 356 NDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVPGPP------YGP-MGA---- 404
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
++ + + + +G ++G+ G++I ++S+ +GA IK++ + R V +
Sbjct: 405 ----SEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAP--AEAPDSKMRMVIV 458
Query: 310 SGPQRSIRTAESMIMQKV 327
+GP + A+ I K+
Sbjct: 459 TGPPEAQFKAQGRIYGKL 476
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 54/209 (25%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 201 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKPISIHSTPEGCSA 258
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL ++++ ++T VP AH
Sbjct: 259 ACRMILEIMNQEAKDTKTAD--------------------------EVPLKVLAH----- 287
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 288 ------NN---------------FVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNP 326
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASD 332
ER +T+ G + AE IM+KV A D
Sbjct: 327 ERTITVKGSIEACCLAEQEIMKKVREAYD 355
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P + R+++++G + +A + KL
Sbjct: 420 GALIGKKGQHIKQLSRFAGASIKIAPAEA--PDSKMRMVIVTGPPEAQFKAQGRIYGKLK 477
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + G K +++L V ++ G +IGK G T+ + + A + + R
Sbjct: 478 EE-------NFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEVVVPR 527
>gi|115496720|ref|NP_001070027.1| insulin-like growth factor 2 mRNA-binding protein 1 [Danio rerio]
gi|123908308|sp|Q08CK7.1|IF2B1_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1
gi|115313169|gb|AAI24197.1| Insulin-like growth factor 2 mRNA binding protein 1 [Danio rerio]
gi|182891894|gb|AAI65463.1| Igf2bp1 protein [Danio rerio]
Length = 598
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 31/318 (9%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P + S +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 182 RQMSPGSGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 240
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + A ++++ + E AD+V L+++ N+ G +I
Sbjct: 241 -GAAEKPISIHSTPEGCSAACRMILEIMNQEAKDTKTADEV----PLKVLAHNNFVGRLI 295
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE--- 194
GK G +K D+ I IS L +R +T+ G+++ A + I+ K+ E
Sbjct: 296 GKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCLAEQEIMKKVREAYD 355
Query: 195 ---DTLYSQTMTVPYTYAGV--FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQ 249
+ QT +P G F MP A+ VP P YGP MG
Sbjct: 356 NDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVPGPP------YGP-MGA---- 404
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
++ + + + +G ++G+ G++I ++S+ +GA IK++ + R V +
Sbjct: 405 ----SEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAP--AEAPDSKMRMVIV 458
Query: 310 SGPQRSIRTAESMIMQKV 327
+GP + A+ I K+
Sbjct: 459 TGPPEAQFKAQGRIYGKL 476
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 54/209 (25%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 201 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKPISIHSTPEGCSA 258
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL ++++ ++T VP AH
Sbjct: 259 ACRMILEIMNQEAKDTKTAD--------------------------EVPLKVLAH----- 287
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 288 ------NN---------------FVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNP 326
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASD 332
ER +T+ G + AE IM+KV A D
Sbjct: 327 ERTITVKGSIEACCLAEQEIMKKVREAYD 355
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P + R+++++G + +A + KL
Sbjct: 420 GALIGKKGQHIKQLSRFAGASIKIAPAE--APDSKMRMVIVTGPPEAQFKAQGRIYGKLK 477
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + G K +++L V ++ G +IGK G T+ + + A + + R
Sbjct: 478 EE-------NFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEVVVPR 527
>gi|336469496|gb|EGO57658.1| hypothetical protein NEUTE1DRAFT_116898 [Neurospora tetrasperma
FGSC 2508]
gi|350290860|gb|EGZ72074.1| hypothetical protein NEUTE2DRAFT_144709 [Neurospora tetrasperma
FGSC 2509]
Length = 371
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 136/326 (41%), Gaps = 45/326 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + + + ++G + +S+ G DR++ I+G D + +
Sbjct: 52 LRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSK---VVQGVHDRVLTITGGCDAVSK 108
Query: 97 AVDLVIDKLLTELHAEDQADDVGT--------KTKLRLIVPNSSCGSIIGKAGATIKSFM 148
A +V LL + A VG ++L++ ++ G++IG+ G IK
Sbjct: 109 AYAVVARSLL------EGAPSVGMGGVISANGTHPIKLLISHNQMGTVIGRQGLKIKHIQ 162
Query: 149 DDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
D S + V + L S +R+V + GT + RA+ I L +D T TV Y
Sbjct: 163 DVSGVRMVAQKEMLPQS----TERVVEVQGTPEGIQRAVWEICKCLVDD-WQRGTGTVLY 217
Query: 207 T----YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD--------- 253
G G P A + N GGR + D
Sbjct: 218 NPVVRGGGQPLGGDRNYPQERSYGSSRVTRTGNGADFSSNSGGRPYNRRSDSDAASRGPP 277
Query: 254 ------DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKV 307
+ + I + + +G ++GR G I EI + SGARI ++ SG ER
Sbjct: 278 THDENGEELQTQNISIPADMVGCIIGRQGTKISEIRKASGARISIAKGPHDESG--ERMF 335
Query: 308 TISGPQRSIRTAESMIMQKVAYASDR 333
TI G ++ TA ++ + + R
Sbjct: 336 TIMGSAKANETALYLLYENLEAEKTR 361
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 75/200 (37%), Gaps = 51/200 (25%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
T LR IV + G IIGK G + + D++ +S++ G++DR++T+TG D
Sbjct: 48 TTLTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKV---VQGVHDRVLTITGGCD 104
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
V YA V S G P
Sbjct: 105 -----------------------AVSKAYAVVARSLLEGAPS------------------ 123
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
MGG N T+ + + ++ +G V+GR G I I +SG R+ +
Sbjct: 124 -VGMGGVISANG----THPIKLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQK--EML 176
Query: 300 SGTSERKVTISGPQRSIRTA 319
++ER V + G I+ A
Sbjct: 177 PQSTERVVEVQGTPEGIQRA 196
>gi|405957186|gb|EKC23416.1| RNA-binding protein Nova-1 [Crassostrea gigas]
Length = 561
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 30/164 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV + AGA+IGKGG TT+R+ +I G ++ +
Sbjct: 55 HLKILVPSIAAGAIIGKGG-------------------------TTERVCLIMGGVEAVK 89
Query: 96 RAVDLVIDKLLTEL----HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
R +++K+ + E+ + +++++VPNS+ G +IGK G IK ++S
Sbjct: 90 RVHCFIMEKIREKPDPNPKPEETNKNFERHRQVKILVPNSTAGMVIGKGGNYIKQIKEES 149
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
A I+IS+ L +R +T+ G +D +A+ELIL K+ ED
Sbjct: 150 GAYIQISQKSKE-TNLPERCITVAGEIDNNRKAVELILQKIVED 192
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS-RSHEF-FPGTTDRIIMISG 89
E+ ++ LV N AG VIGKGG+ I + +SGA IQ+S +S E P +R I ++G
Sbjct: 117 ERHRQVKILVPNSTAGMVIGKGGNYIKQIKEESGAYIQISQKSKETNLP---ERCITVAG 173
Query: 90 TIDEILRAVDLVIDKLL 106
ID +AV+L++ K++
Sbjct: 174 EIDNNRKAVELILQKIV 190
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
VA+ +G ++G GG+ I+E+ Q + I++S +G + GT R VT++G +I A +
Sbjct: 484 VAESIVGAILGPGGKGIVELQQFTQTNIQISKKGVYVPGTRNRIVTVTGTPNNISKARYL 543
Query: 323 IMQKV 327
I Q++
Sbjct: 544 IQQRI 548
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V+ + GA++G GG I + Q + IQ+S+ + PGT +RI+ ++GT + I +A L
Sbjct: 484 VAESIVGAILGPGGKGIVELQQFTQTNIQISKKGVYVPGTRNRIVTVTGTPNNISKARYL 543
Query: 101 VIDKLLTE 108
+ ++ E
Sbjct: 544 IQQRIQQE 551
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 86/226 (38%), Gaps = 71/226 (31%)
Query: 103 DKLLTELHAEDQADDV-GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
D+L + E D V G L+++VP+ + G+IIGK G T
Sbjct: 34 DQLHQMMTEEPNGDTVMGDNVHLKILVPSIAAGAIIGKGGTT------------------ 75
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPY 221
+R+ + G ++ R I+ K+ E
Sbjct: 76 -------ERVCLIMGGVEAVKRVHCFIMEKIREK-------------------------- 102
Query: 222 GAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
P P P P T ++ +R + I V + G V+G+GG I +
Sbjct: 103 ---PDPNPK-PEETNKNF--------------ERHRQVKILVPNSTAGMVIGKGGNYIKQ 144
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
I + SGA I++S + + ER +T++G + R A +I+QK+
Sbjct: 145 IKEESGAYIQISQKSKE-TNLPERCITVAGEIDNNRKAVELILQKI 189
>gi|326935642|ref|XP_003213877.1| PREDICTED: poly(rC)-binding protein 2-like, partial [Meleagris
gallopavo]
Length = 168
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 20/177 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGKG S + + +SGARI +S + +RII ++G + I +A ++IDKL
Sbjct: 2 GSIIGKGKS-VKKMREESGARINISEGN-----CPERIITLAGPTNAIFKAFAMIIDKLE 55
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDH 162
++ + ++ LRL+VP S CGS+IGK G IK + + A ++++ L +
Sbjct: 56 EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 115
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSG 215
S +R +T+ G + ++ I + + E + +T+PY + + V F+G
Sbjct: 116 S----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSSSPVIFAG 166
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 55/192 (28%)
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
GSIIGK G ++K ++S A R++ S +R++TL G + +A +I+ KL
Sbjct: 2 GSIIGK-GKSVKKMREESGA-----RINISEGNCPERIITLAGPTNAIFKAFAMIIDKLE 55
Query: 194 EDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD 253
ED S +MT ++TAA P
Sbjct: 56 ED--ISSSMT-----------------------------NSTAASRPPV----------- 73
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG-P 312
+L + V G ++G+GG I EI + +GA+++V+ GD ++ER +TI+G P
Sbjct: 74 ----TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIAGIP 127
Query: 313 QRSIRTAESMIM 324
Q I + + +
Sbjct: 128 QSIIECVKQICV 139
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 65 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 122
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 123 IAGIPQSIIECVKQICVVML 142
>gi|402083824|gb|EJT78842.1| hypothetical protein GGTG_03937 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 373
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 134/321 (41%), Gaps = 55/321 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G R +S+ G DR++ I+G D I +
Sbjct: 48 VRAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSK---VVQGVHDRVLTITGGCDAISK 104
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A +V LL L GT ++L++ ++ G+IIG+ G IK D S
Sbjct: 105 AYAIVARALLEGAPTLGMGGVVQSNGTH-PIKLLISHNQMGTIIGREGLKIKHIQDVSGV 163
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGV 211
+ V + L S N+R+V + GT + RA+ I L +D T TV Y A
Sbjct: 164 RMVAQKDMLPQS----NERVVEVQGTPEGIQRAVWEICKCLIDD-WQRATGTVLYNPA-- 216
Query: 212 FFSGFHGMPYGAVPPPVPAVPHNTAAHYG----------------------PNMGGRKFQ 249
P GA P +N+ G P + R+
Sbjct: 217 ----VRTQPGGAPPLTTGGPGYNSTGARGDYGSSPRVTRTGNGADFSNGSTPRLYNRRSD 272
Query: 250 NNKDDR-----------TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
++ +R + I + +G ++GR G I EI + SGARI ++
Sbjct: 273 SDAANRGPPTHDENGEEIQTQNISIPANMVGCIIGRAGSKISEIRKASGARISIAKA--P 330
Query: 299 FSGTSERKVTISGPQRSIRTA 319
T ER TI G ++ +A
Sbjct: 331 HDETGERMFTIMGSAKANESA 351
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
T R LV G++IG+ G I ++ ARI++ + PGTT+R +M+SG
Sbjct: 187 TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPPGTTERAVMVSGKEEPE 243
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
++D +LR ++D L E V T RL+VP S GS+IGK G T+
Sbjct: 244 SSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVST----RLLVPASQAGSLIGKQGGTV 299
Query: 145 KSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
K+ + S ++++ D + L +DR+V + G RALELI L
Sbjct: 300 KAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHL 349
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 2 ETNESSYVPSPD----VH--------GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAV 49
E ESS PS D VH G+ S AP S S R LV AG++
Sbjct: 240 EEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVS--------TRLLVPASQAGSL 291
Query: 50 IGKGGSTINDFQSQSGARIQLSRSHEF--FPGTTDRIIMISGTIDEILRAVDLVIDKL 105
IGK G T+ Q S +++ S + F DR++ + G + RA++L+ L
Sbjct: 292 IGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHL 349
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
T R LV G++IG+ G I ++ ARI++ + PGTT+R +M+SG
Sbjct: 187 TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPPGTTERAVMVSGKEEPE 243
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
++D +LR ++D L E V T RL+VP S GS+IGK G T+
Sbjct: 244 SSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVST----RLLVPASQAGSLIGKQGGTV 299
Query: 145 KSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
K+ + S ++++ D + L +DR+V + G RALELI L
Sbjct: 300 KAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHL 349
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 2 ETNESSYVPSPD----VH--------GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAV 49
E ESS PS D VH G+ S AP S S R LV AG++
Sbjct: 240 EEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVS--------TRLLVPASQAGSL 291
Query: 50 IGKGGSTINDFQSQSGARIQLSRSHEF--FPGTTDRIIMISGTIDEILRAVDLVIDKL 105
IGK G T+ Q S +++ S + F DR++ + G + RA++L+ L
Sbjct: 292 IGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHL 349
>gi|355733298|gb|AES10985.1| poly binding protein 2 [Mustela putorius furo]
Length = 148
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 82
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 83 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 142
Query: 155 IKIS 158
++++
Sbjct: 143 VQVA 146
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 51/170 (30%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A R++ S +R++TL G + +
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGA-----RINISEGNCPERIITLAGPTNAIFK 82
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I+ KL ED S +MT ++TAA P
Sbjct: 83 AFAMIIDKLEED--ISSSMT-----------------------------NSTAASRPP-- 109
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
+L + V G ++G+GG I EI + +GA+++V+
Sbjct: 110 -------------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA 146
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 35 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 89
Query: 326 KV 327
K+
Sbjct: 90 KL 91
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 33/319 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ PG DR++ ++G + R
Sbjct: 229 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVPGVHDRVLTVTGALSGTAR 285
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A LV LL ++ + GT +RL++ ++ G+IIG+ G IK D S
Sbjct: 286 AYALVAKGLLEGAPQMGMGGIVSNNGTH-PIRLLISHNQMGTIIGRQGLKIKHIQDASGV 344
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGV 211
+ V + L S +R+V + GT + +A+ I L +D T T+ Y A
Sbjct: 345 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAIWEIGKCLIDD-WQRGTGTILYNPAVR 399
Query: 212 FFSGFHGMPY-GAVPPPVPAVPHN---TAAHYGPNMGGRKFQNNKD-------------D 254
G + + G + P+N A + GG ++N D +
Sbjct: 400 SSVGSGSIQHNGGNSDSYNSRPYNRTGNGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGE 459
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
+ I + + +G ++GRGG I EI + SGARI ++ T ER TI G +
Sbjct: 460 EIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKAP--HDETGERMFTIMGSAQ 517
Query: 315 SIRTAESMIMQKVAYASDR 333
+ A ++ + + R
Sbjct: 518 ANEKALYLLYENLEAEKTR 536
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 142/333 (42%), Gaps = 40/333 (12%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V +L ++ R + SN GAVIGKGGS + Q++SGA I S D
Sbjct: 258 VSALDPKALQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPS---LVECED 314
Query: 83 RIIMISGTIDE-------ILRAVDLVIDKLLTELHAEDQADDVGTKTK----LRLIVPNS 131
R++ I+ + +AV LV K + ++ D+G+K + +L+VP++
Sbjct: 315 RLVTITASEQNPESRYSPAQKAVVLVFSKSVEA--GVEKGLDMGSKKESYVTAQLVVPSN 372
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELIL 189
G ++GK GA + + A I++ D ND+LV ++G A+
Sbjct: 373 QVGCLLGKGGAIVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNAT 432
Query: 190 LKLSEDTLYS-QTMTVPYTYAGVFFSG-----------FHGMPYGAVPPPVPA----VPH 233
+L ++ S Q + + V G H +P P V V +
Sbjct: 433 GRLRDNLFVSTQNSGGARSLSSVLSGGKPTVAVSLSLNRHSLPGLQAPQTVAGINSRVTN 492
Query: 234 NTAAHYGPNMGGRKFQNNKDDR--TN-SLTIGVADEHIGFVVGRGGRNIMEISQISGARI 290
+ GG + + TN ++ I V D+ IG V G G N+ + QISGA++
Sbjct: 493 GVSRGLTSQKGGLELVSGSKTAIVTNTTVQIAVPDDVIGSVYGENGSNLARLRQISGAKV 552
Query: 291 KVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
V + GTS+R + ISG R A+S++
Sbjct: 553 IVHEP---RPGTSDRTIIISGTPDETRAAQSLL 582
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P R L GA+IGK G I Q +GA+I++ + P + DR+I++
Sbjct: 18 SRPYTTHVTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRI---EDAPPDSPDRVILV 74
Query: 88 S-------GTIDEILRAVDLVIDKLLTELHAEDQADDVGTK-TKLRLIVPNSSCGSIIGK 139
S G + A+ V D++L ++ AE +VG + RL+ S G++IGK
Sbjct: 75 SAPAAASDGEVSTAQVALLKVFDRVL-DVAAETAGTEVGDRVVSCRLLADTSQVGAVIGK 133
Query: 140 AGATIKSFMDDSQAVIKISRLDHSYYGL---NDRLVTLTGTLDEQMRAL 185
AG ++ D+ I++ L+ +D +V + G L +AL
Sbjct: 134 AGKVVEKIRMDTGCKIRV--LNEGLPACTAPSDEIVEVEGQLTSVKKAL 180
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 143/321 (44%), Gaps = 77/321 (23%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R L + + G+VIGK G IN + ++ ARI++ + FPG ++R+I I ++ E
Sbjct: 47 RILCPSGVMGSVIGKSGKVINLIRQETRARIKVV---DPFPGCSERVITIFCSVSEKKDI 103
Query: 98 VDLVIDKL------------LTELH----------AEDQADDVGTKTKLRLIVPNSSCGS 135
VD+ +L L ++H AE+ D + RL+VP+S C
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRALEL 187
+IGK+G+ IK+ ++A +K+ D H+ D +V ++G ++ + + A+
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSA 223
Query: 188 ILLKLSE------DTLYSQ---TMTVP-----YTYAGVF------------FSGFHG-MP 220
I+ K+S DT + ++ +P Y AG++ S F G +P
Sbjct: 224 IMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFIGTLP 283
Query: 221 YG-----AVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV--ADEHIGFVVG 273
G A P PV + H GG R+ L I V + IG V+G
Sbjct: 284 QGYGENAANPVPVFSASALPVVH---GFGG-------SSRSEKLAIKVICSSSKIGRVIG 333
Query: 274 RGGRNIMEISQISGARIKVSD 294
+GG I I Q SG+ I+V+D
Sbjct: 334 KGGLTIKGIRQASGSHIEVND 354
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 27/212 (12%)
Query: 4 NESSYVPS-PDVHGKRSTAPVKSLS------------SDPTEKPTYIRFLVSNPLAGAVI 50
N SS++ + P +G+ + PV S S +EK I+ + S+ G VI
Sbjct: 274 NVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEK-LAIKVICSSSKIGRVI 332
Query: 51 GKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DEILRAVDLVIDKLLT 107
GKGG TI + SG+ I+++ S D +I ++ T D AV+ V LL
Sbjct: 333 GKGGLTIKGIRQASGSHIEVNDSRTNH--DDDCVITVTATESPDDLKSMAVEAV---LLL 387
Query: 108 ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS--YY 165
+ D+ +D K K++L+V + G IIGK+G+ I ++A I IS+ +++
Sbjct: 388 QEKINDEDED---KVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKCA 444
Query: 166 GLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
ND LV ++G + AL I+L+L +D L
Sbjct: 445 DPNDELVEISGEVSNVRDALIQIVLRLRDDVL 476
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
R LV GA+IG+ G I +S ARI++ + PG +R +MIS DE
Sbjct: 116 FRILVPVHKVGAIIGRKGEFIKRMCEESKARIKIL---DGPPGVPERAVMISAK-DEPDE 171
Query: 97 AVDLVIDKLLTELHAE--DQADD--------VGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ +D LL +H D +D GT RL+VP S GS+IGK GATIKS
Sbjct: 172 QISPAMDGLLR-IHKRIADGSDGEFGQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKS 230
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
D S+AV++I +DR+V + G +A+ELI L
Sbjct: 231 IQDSSKAVVRIVENVPPVALNDDRVVEIQGEPLSVQKAVELIASHL 276
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 141/321 (43%), Gaps = 77/321 (23%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R L + + G+VIGK G IN + ++ ARI++ + FPG ++R+I I ++ E
Sbjct: 47 RILCPSGVMGSVIGKSGKVINLIRQETRARIKVV---DPFPGCSERVITIFCSVSEKKDI 103
Query: 98 VDLVIDKL------------LTELH----------AEDQADDVGTKTKLRLIVPNSSCGS 135
VD+ +L L ++H AE+ D + RL+VP+S C
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL---EL 187
+IGK+G+ IK+ ++A +K+ D H+ D +V ++G + +AL
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSA 223
Query: 188 ILLKLSE------DTLYSQ---TMTVP-----YTYAGVF------------FSGFHG-MP 220
I+ K+S DT + ++ +P Y AG++ S F G +P
Sbjct: 224 IMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFIGTLP 283
Query: 221 YG-----AVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV--ADEHIGFVVG 273
G A P PV + H GG R+ L I V + IG V+G
Sbjct: 284 QGYGENAANPVPVFSASALPVVH---GFGG-------SSRSEKLAIKVICSSSKIGRVIG 333
Query: 274 RGGRNIMEISQISGARIKVSD 294
+GG I I Q SG+ I+V+D
Sbjct: 334 KGGLTIKGIRQASGSHIEVND 354
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 27/212 (12%)
Query: 4 NESSYVPS-PDVHGKRSTAPVKSLS------------SDPTEKPTYIRFLVSNPLAGAVI 50
N SS++ + P +G+ + PV S S +EK I+ + S+ G VI
Sbjct: 274 NVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEK-LAIKVICSSSKIGRVI 332
Query: 51 GKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DEILRAVDLVIDKLLT 107
GKGG TI + SG+ I+++ S D +I ++ T D AV+ V LL
Sbjct: 333 GKGGLTIKGIRQASGSHIEVNDSRTNH--DDDCVITVTATESPDDLKSMAVEAV---LLL 387
Query: 108 ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS--YY 165
+ D+ +D K K++L+V + G IIGK+G+ I ++A I IS+ +++
Sbjct: 388 QEKINDEDED---KVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKCA 444
Query: 166 GLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
ND LV ++G + AL I+L+L +D L
Sbjct: 445 DPNDELVEISGEVSNVRDALIQIVLRLRDDVL 476
>gi|354490712|ref|XP_003507500.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cricetulus griseus]
Length = 731
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 131/310 (42%), Gaps = 16/310 (5%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 333 RQASPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 389
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + + L+++ N+ G +I
Sbjct: 390 -GAAEKPITILSTPE----GASAACKSILEIMHKEAQDTKLTEEVPLKILAHNNFVGRLI 444
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GK G +K D+ I IS L +R +T+ G ++ RA E I+ K+ E
Sbjct: 445 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCARAEEEIMKKIRES-- 502
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN 257
Y + G + G PP P + +F+ ++ T
Sbjct: 503 YENDIAS-MNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTMTPPYPQFEQSE---TE 558
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
++ + + +G ++G+ G++I ++S+ +GA IK++ R V I+GP +
Sbjct: 559 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAP--AEAPDAKVRMVIITGPPEAQF 616
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 617 KAQGRIYGKI 626
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 570 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 627
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 628 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 683
Query: 167 LNDRLVTLTG 176
N +V +TG
Sbjct: 684 NNQVVVKITG 693
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 150/356 (42%), Gaps = 71/356 (19%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV G++IG+ G I ++ ARI++ + PGTT+R +M+S
Sbjct: 152 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMVSAKEEPD 208
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+D +LR ++D L + + + GTK RL+VP S GS+IGK G T+
Sbjct: 209 SALPPAMDGLLRVHKRIVDGLDGD--SSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTV 266
Query: 145 KSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELI---LLKLSED---- 195
KS + S V+++ D + L +DR+V + G +A+ELI L K D
Sbjct: 267 KSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRKFLVDRSII 326
Query: 196 ---TLYSQTMTVPYTY-----------AGVFFSGFHGMPYGA------------------ 223
++ Q P+ G+ + G YG
Sbjct: 327 PLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPPNAGGGPGYGNPQYMPPPRQIENYYPPAD 386
Query: 224 VPPPVPAVPHNTAAHYGPN--MGGRKFQNNK------DDRTNSLTIGVADEHIGFVVGRG 275
+PPP+ PH + YG MG N++ T + I ++ + V+G
Sbjct: 387 LPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSMITQITQQMQIPLS--YADAVIGTA 444
Query: 276 GRNIMEISQISGARIKVSD-RGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYA 330
G +I I + SGA + + + RG E V ISG ++TA+ +I +A A
Sbjct: 445 GTSISYIRRASGATVTIQETRGV----PGEMTVEISGTASQVQTAQQLIQNFMAEA 496
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 144/354 (40%), Gaps = 68/354 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
R LV GA+IG+ G I QS ARI++ + PG T+R ++IS
Sbjct: 116 FRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKIL---DGPPGVTERAVIISAKDEPDEP 172
Query: 90 ---TIDEILRAVDLVIDKLLTEL-HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+D +LR + D E + A +VG RL+VP S GS+IGK GATIK
Sbjct: 173 ISPAMDGLLRIHKRITDGSDGEFGQPQRGASNVGP---TRLLVPASQAGSLIGKQGATIK 229
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI------------LLKLS 193
S D S++V++I +DR+V + G +A+ELI +L L
Sbjct: 230 SIQDSSKSVVRIVENVPPVALNDDRVVEIQGEPLGVHKAVELIANHLRKFLVDHSVLPLF 289
Query: 194 EDTLY------SQTMTVPYTYAGV------FFSGFHGMPYGAVP---PPVP--------- 229
E + Q MT P + G YG P PP P
Sbjct: 290 EQQMKMHSVQREQPMTAPQHWTPTQPWLPPPNLPPVGPGYGGNPQFMPPRPQDNYYPRPD 349
Query: 230 AVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE---------HIGFVVGRGGRNIM 280
P HYG + GR+ + N + VA + + V+G G +I
Sbjct: 350 VPPMEKQPHYGISAYGREAPPSGTS-GNQPPLHVASQVHNMQIPLSYADAVIGAAGASIS 408
Query: 281 EISQISGARIKVSD-RGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
I + SGA + + + RG E V I G ++TA+ +I +A A+ +
Sbjct: 409 YIRRQSGAAVTIQESRG----APGEMTVEIIGSASQVQTAQQLIQNFMAEAAPQ 458
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 20/186 (10%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R + P +T R++ + GT D+I +A
Sbjct: 138 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIAKA 197
Query: 98 VDLVIDKLLTELHAEDQADDVGTK--------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
L+ D +L+E AE + ++ + + +PN+ G +IGK G TIKS
Sbjct: 198 EQLIND-VLSE--AESGGSGIVSRRLTGPSGSEQFVMKIPNNKVGLVIGKGGETIKSMQA 254
Query: 150 DSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
+ A I++ L D S +R + + G+ ++ A +L+ +SE+ + M+
Sbjct: 255 RTGARIQVIPLHLPPGDTS----TERTLQIDGSSEQIESAKQLVNEVISENRARNSGMSG 310
Query: 205 PYTYAG 210
Y G
Sbjct: 311 GYNQQG 316
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG-----SCPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 SKIKEIREVTGASIQVASEMLPNS----TERAVTISGTSEAITQCIYHICCVMLESP--P 177
Query: 200 QTMTVPY 206
+ T+PY
Sbjct: 178 KGATIPY 184
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 87/203 (42%), Gaps = 55/203 (27%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
DD +RLI+ GSIIGK G +K F ++S A I IS D S +R+VT+T
Sbjct: 12 DDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINIS--DGS---CPERIVTVT 66
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGA-VP-PPVPAVPH 233
G + +A LI K E + S FH + G VP PP+
Sbjct: 67 GPTNSIFKAFTLICKKFEE-----------------WCSQFHDIQSGGGVPRPPI----- 104
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
+L + V G ++G+GG I EI +++GA I+V+
Sbjct: 105 ------------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA 140
Query: 294 DRGDFFSGTSERKVTISGPQRSI 316
+ ++ER VTISG +I
Sbjct: 141 S--EMLPNSTERAVTISGTSEAI 161
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
Q +++T+ +T V +E IG ++G+GG I EI QISGA I++S+ + G ++R +T
Sbjct: 360 QPAANNQTHEMT--VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTIT 417
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+G ++ A+ +I V
Sbjct: 418 ITGNPDAVALAQYLISMSV 436
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 428
Query: 98 VDLV 101
L+
Sbjct: 429 QYLI 432
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 428
Query: 185 LELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 429 QYLISMSVELQKANLEAQNTQTP 451
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
NM + N+ T ++ + + + +G ++G+ G + + SGA+I +SD
Sbjct: 3 NMDAKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-----GS 57
Query: 302 TSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
ER VT++GP SI A ++I +K + D
Sbjct: 58 CPERIVTVTGPTNSIFKAFTLICKKFEEWCSQFHD 92
>gi|116192195|ref|XP_001221910.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181728|gb|EAQ89196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 375
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 135/310 (43%), Gaps = 45/310 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G + I R
Sbjct: 52 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVYDRVLTITGGCEAISR 108
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL V + ++L++ ++ G+IIG+ G IK D S +
Sbjct: 109 AYAVVARALLEGAPTIGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVR 168
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVP 205
V + L S +R+V + GT + RA+ I L +D LY+ +
Sbjct: 169 MVAQKEMLPQS----TERIVEVQGTPEGIQRAIWEICKCLVDDWQRGAGTVLYNPVVRTQ 224
Query: 206 YTYAGVFFSGFHGM-----PYGAV---------------PPPVPAVPHNTAAHYGPNMGG 245
A +G PYG P P + AA GP
Sbjct: 225 GAGAAPGVTGTTNFVQDRAPYGGSRVTRTGNGADFSNGGPRPYNRRSDSDAAARGPPT-- 282
Query: 246 RKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+N ++ +T +++I + +G ++GRGG I EI + SGARI ++ T ER
Sbjct: 283 -HDENGEEIQTQNISI--PADMVGCIIGRGGSKISEIRKTSGARISIAKA--PHDETGER 337
Query: 306 KVTISGPQRS 315
TI G ++
Sbjct: 338 MFTIMGSAKA 347
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG-----SCPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H + V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 SKIKEIREVTGASIQVASDMLPNS----TERAVTISGTSEAITQCIYHICCVMLESP--P 177
Query: 200 QTMTVPY 206
+ T+PY
Sbjct: 178 KGATIPY 184
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 87/203 (42%), Gaps = 55/203 (27%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
DD +RLI+ GSIIGK G +K F ++S A I IS D S +R+VT+T
Sbjct: 12 DDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINIS--DGS---CPERIVTVT 66
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMP-YGAVP-PPVPAVPH 233
G + +A LI K E + S FH + G VP PP+
Sbjct: 67 GPTNSIFKAFTLICKKFEE-----------------WCSQFHDIQGSGGVPRPPI----- 104
Query: 234 NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
+L + V G ++G+GG I EI +++GA I+V+
Sbjct: 105 ------------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA 140
Query: 294 DRGDFFSGTSERKVTISGPQRSI 316
D ++ER VTISG +I
Sbjct: 141 S--DMLPNSTERAVTISGTSEAI 161
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
Q +++T+ +T V +E IG ++G+GG I EI QISGA I++S+ + G ++R +T
Sbjct: 360 QPAANNQTHEMT--VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTIT 417
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+G ++ A+ +I V
Sbjct: 418 ITGNPDAVSLAQYLISMSV 436
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A L
Sbjct: 372 VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQYL 431
Query: 101 V 101
+
Sbjct: 432 I 432
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLA 428
Query: 185 LELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 429 QYLISMSVELQKANLEAQNTQTP 451
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 253 DDRTNSLTIGV--ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
DD + +LTI + + +G ++G+ G + + SGA+I +SD ER VT++
Sbjct: 12 DDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-----GSCPERIVTVT 66
Query: 311 GPQRSIRTAESMIMQKVAYASDRLMD 336
GP SI A ++I +K + D
Sbjct: 67 GPTNSIFKAFTLICKKFEEWCSQFHD 92
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 142/320 (44%), Gaps = 34/320 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ PG DR++ ++G + R
Sbjct: 40 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVPGVHDRVLTVTGPLQGTAR 96
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A LV LL ++ ++ GT +RL++ ++ G+IIG+ G IK D S
Sbjct: 97 AYALVAKGLLEGAPQMGMGGIVNNNGTH-PVRLLISHNQMGTIIGRQGLKIKHIQDASGV 155
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA-G 210
+ V + L S +R+V + GT + +A+ I L +D T T+ Y A
Sbjct: 156 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAVWEIGKCLIDD-WQRGTGTILYNPAVR 210
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAH-----------YG----PNMGGRKFQNNKDD- 254
G M +V + P+N + YG P+ R + +D
Sbjct: 211 ASVGGSTSMNTSSVGNGYSSRPYNRTGNGADFSDGQSGGYGRRSNPDTSNRGYPLVTEDG 270
Query: 255 -RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+ I + + +G ++GRGG I EI + SGARI ++ T ER TI G
Sbjct: 271 EEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA--PHDETGERMFTIMGSA 328
Query: 314 RSIRTAESMIMQKVAYASDR 333
++ A ++ + + R
Sbjct: 329 QANEKALYLLYENLEAEKTR 348
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 86/229 (37%), Gaps = 51/229 (22%)
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+DE + V D+ E+ + + + + LR IV + G IIGKAG + D+
Sbjct: 7 VDETMADAVNVADEGDMEVTPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDE 66
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
+ +S++ G++DR++T+TG L RA L+ L E
Sbjct: 67 TGVKAGVSKV---VPGVHDRVLTVTGPLQGTARAYALVAKGLLEGA-------------- 109
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGF 270
P MG NN + T+ + + ++ +G
Sbjct: 110 ------------------------------PQMGMGGIVNN--NGTHPVRLLISHNQMGT 137
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTA 319
++GR G I I SG R+ + ++ER V + G I A
Sbjct: 138 IIGRQGLKIKHIQDASGVRMVAQK--EMLPQSTERIVEVQGTPEGIEKA 184
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 46/233 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGTIDEIL 95
+R ++ G++IGK G I F+ SGA+I +S GT +RI+ ++G+ + IL
Sbjct: 14 VRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISD------GTCPERIVTVTGSTECIL 67
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTK------------------LRLIVPNSSCGSII 137
+A L+ K E+ + G+ T+ LRLIVP S CGS+I
Sbjct: 68 KAFSLICAKF------EEMSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLI 121
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GKAG+ I+ + + A ++++ +R VT+ GT D + + I + E
Sbjct: 122 GKAGSKIREIREITGASVQVA--SEMLPNSTERTVTVAGTADAVTKCIYQICCVMLE--C 177
Query: 198 YSQTMTVPY----TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ T+PY V F+G G Y A+P P H A + P
Sbjct: 178 PPKGATIPYRPKPAMPPVIFAG--GQAYTVQGSYAIPHPDLTKLHQLALQHAP 228
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
+ ++ IG V+G+GG+ I EI Q+SGA IK+S + G+ ER V+ISG +I A+ +
Sbjct: 311 IPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEE---GSKERCVSISGTPEAINLAQYL 367
Query: 323 I 323
I
Sbjct: 368 I 368
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T P +R +V G++IGK GS I + + +GA +Q+ + E P +T+R + ++GT
Sbjct: 102 TPPPVTLRLIVPASQCGSLIGKAGSKIREIREITGASVQV--ASEMLPNSTERTVTVAGT 159
Query: 91 IDEILRAVDLVIDKLL 106
D + + + + +L
Sbjct: 160 ADAVTKCIYQICCVML 175
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N L G VIGKGG IN+ + SGA I++S + E G+ +R + ISGT + I A L
Sbjct: 311 IPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEE---GSKERCVSISGTPEAINLAQYL 367
Query: 101 V 101
+
Sbjct: 368 I 368
>gi|449669385|ref|XP_002157937.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Hydra magnipapillata]
Length = 549
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 141/345 (40%), Gaps = 48/345 (13%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH-EFFPGTTDR-IIMI 87
P + P R LV + + ++GKGG TI Q+ +G +I + R + G D I+ I
Sbjct: 135 PQQYPC--RILVPSDMVKVLLGKGGCTITAMQTNTGTKIDIHRDKGPCYRGPCDETIVTI 192
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
G + +A+ ++ E D D +L+L+ + CG IIGK G +K
Sbjct: 193 KGDPESFSKAIREILSAFSNEYEKRDT--DARKPIQLKLLAHDLLCGRIIGKGGNNLKQT 250
Query: 148 MDD---SQAVIKISRLDHS-------YYGLNDRLVTLTGTLDEQMRALELILLKLSE--- 194
+ S+ +I S + S + +R++T+ G+LD A LI KL E
Sbjct: 251 KQESNVSKLIISNSIYEESSQMIPTGFVCTGERVITIEGSLDAICIAESLISKKLREYME 310
Query: 195 ---DTLYSQTM----------TVPYTYAGVFFSGFHG------MPYGAVPPPVPAVPHNT 235
Y+ M + Y Y + +G Y A P + P
Sbjct: 311 KDARNQYNTNMGLYHGAAFGGQINYGYNPQMYPRMYGGYTVDTFGYPAYPSSMNNYPGIL 370
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
Y P ++ + + I + + +G ++GR G I + Q SGA+I+V +
Sbjct: 371 GHGYLPYTPPQQVPYYSNFEPETTCILIPTKEVGAIIGRNGGYISRMKQYSGAQIRVI-K 429
Query: 296 GDFFSGTSERKVTISGP----QRSIRTAESMIMQ--KVAYASDRL 334
GD E KV I GP R+ S I + KVAY+ +L
Sbjct: 430 GD---EGGESKVEIVGPPDCQWRASLCVFSKIKETMKVAYSEAQL 471
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 30 PTEKPTYIRF-------LVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
P + P Y F L+ GA+IG+ G I+ + SGA+I++ + E G
Sbjct: 380 PQQVPYYSNFEPETTCILIPTKEVGAIIGRNGGYISRMKQYSGAQIRVIKGDE---GGES 436
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTELH-AEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
++ ++ G D RA V K+ + A +A + K IVP S G +IGK G
Sbjct: 437 KVEIV-GPPDCQWRASLCVFSKIKETMKVAYSEA-----QLKTEFIVPGSCVGRVIGKKG 490
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
++ D +QA I++ + G ND V +TGT + A+ I
Sbjct: 491 QVVQDIQDKAQADIEVPKDKQ---GANDVPVYITGTFNGTQIAISRI 534
>gi|268570691|ref|XP_002640810.1| C. briggsae CBR-PES-4 protein [Caenorhabditis briggsae]
Length = 447
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 15/169 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + +SGA+I +S +RI+ I+GT+ I +
Sbjct: 76 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGS-----CPERIVTITGTLGVIGK 130
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++V +K ++ + T +R+IVP + CGS+IGK G+ IK + + A I+
Sbjct: 131 AFNMVCNKFEEDMLLLPNSVPKPPIT-MRVIVPATQCGSLIGKGGSKIKDIREATGASIQ 189
Query: 157 ISR--LDHSYYGLNDRLVTLTGTLDE---QMRALELILLKLSEDTLYSQ 200
++ L HS +R VTL+GT D M + ILL+++ L ++
Sbjct: 190 VASEMLPHS----TERAVTLSGTADAINLCMTQVCQILLEVTRKKLSTE 234
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G++IGKGGS I D + +GA IQ++ E P +T+R + +SGT D
Sbjct: 154 PITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVA--SEMLPHSTERAVTLSGTADA 211
Query: 94 ILRAVDLVIDKLL----TELHAEDQA 115
I + V LL +L E++A
Sbjct: 212 INLCMTQVCQILLEVTRKKLSTENKA 237
>gi|219128327|ref|XP_002184367.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404168|gb|EEC44116.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 297
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
+P P ++ LVSN +AG++IG+ G TI++ Q+QS RI+LS++ +++PGT DR+ +I
Sbjct: 188 NPANYPFALKILVSNNVAGSIIGRAGQTIDELQTQSQTRIKLSQAGDYYPGTQDRVCLIQ 247
Query: 89 GTIDEILRAVDLVID---KLLTELHAEDQA 115
G + + A+ L++ KL ++ HA+ A
Sbjct: 248 GKPENVRTALQLLLARLFKLQSDQHAQQLA 277
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++V N+ GSIIG+AG TI SQ IK+S+ Y G DR+ + G +
Sbjct: 196 LKILVSNNVAGSIIGRAGQTIDELQTQSQTRIKLSQAGDYYPGTQDRVCLIQGKPENVRT 255
Query: 184 ALELILLKL 192
AL+L+L +L
Sbjct: 256 ALQLLLARL 264
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+L I V++ G ++GR G+ I E+ S RIK+S GD++ GT +R I G ++R
Sbjct: 195 ALKILVSNNVAGSIIGRAGQTIDELQTQSQTRIKLSQAGDYYPGTQDRVCLIQGKPENVR 254
Query: 318 TAESMIMQKV 327
TA +++ ++
Sbjct: 255 TALQLLLARL 264
>gi|308460519|ref|XP_003092563.1| CRE-PES-4 protein [Caenorhabditis remanei]
gi|308253083|gb|EFO97035.1| CRE-PES-4 protein [Caenorhabditis remanei]
Length = 436
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + +SGA+I +S +RI+ I+GT+ I +
Sbjct: 75 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGS-----CPERIVTITGTLGVIGK 129
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++V +K ++ + T +R+IVP + CGS+IGK G+ IK + + A I+
Sbjct: 130 AFNMVCNKFEEDMLLLPNSVPKPPIT-MRVIVPATQCGSLIGKGGSKIKDIREATGASIQ 188
Query: 157 ISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
++ L HS +R VTL+GT D A+ L + ++ + L
Sbjct: 189 VASEMLPHS----TERAVTLSGTAD----AINLCMTQVCQILL 223
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G++IGKGGS I D + +GA IQ++ E P +T+R + +SGT D
Sbjct: 153 PITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVA--SEMLPHSTERAVTLSGTADA 210
Query: 94 ILRAVDLVIDKLL 106
I + V LL
Sbjct: 211 INLCMTQVCQILL 223
>gi|392894107|ref|NP_497351.3| Protein PES-4 [Caenorhabditis elegans]
gi|373220643|emb|CCD73932.1| Protein PES-4 [Caenorhabditis elegans]
Length = 432
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + +SGA+I +S +RI+ I+GT+ I +
Sbjct: 74 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGS-----CPERIVTITGTLGVIGK 128
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++V +K ++ + T +R+IVP + CGS+IGK G+ IK + + A I+
Sbjct: 129 AFNMVCNKFEEDMLLLPNSVPKPPIT-MRVIVPATQCGSLIGKGGSKIKDIREATGASIQ 187
Query: 157 ISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
++ L HS +R VTL+GT D A+ L + ++ + L
Sbjct: 188 VASEMLPHS----TERAVTLSGTAD----AINLCMTQVCQILL 222
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
+ P +R +V G++IGKGGS I D + +GA IQ++ E P +T+R + +SGT
Sbjct: 150 KPPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVAS--EMLPHSTERAVTLSGTA 207
Query: 92 DEILRAVDLVIDKLL 106
D I + V LL
Sbjct: 208 DAINLCMTQVCQILL 222
>gi|313224203|emb|CBY43618.1| unnamed protein product [Oikopleura dioica]
Length = 331
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 134/302 (44%), Gaps = 25/302 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS-RSHEFFPGTTDRIIMISGTIDEIL 95
+RFL++ A +IG+ S I + + Q+ I LS R HE R++ I+ +
Sbjct: 10 LRFLMNQKQASQIIGRNASNIKNLREQTECNITLSSREHE------KRLLTIAAKKSISM 63
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKL-----RLIVPNSSCGSIIGKAGATIKSFMDD 150
+ V +L L AE+ ++ G TKL L++P + CG IIGK G +K
Sbjct: 64 KTVS----RLGEILEAEN--NEYGKSTKLVPITLTLVIPKNICGMIIGKGGEALKDLRVK 117
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALEL---ILLKLSEDTLYSQTMTVPYT 207
S A I +S ++R +TG +A++L I++K + D + P
Sbjct: 118 SGAQINMSA--DCLPKSDERTCQITGNNISVTQAIDLLIGIMIKAAIDESKGEFKGTPSA 175
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLT-IGVADE 266
+ P G + TA M + + + + L + V ++
Sbjct: 176 EIRAYDPKNAEEPAGRSEKDDKLMQMATAFMTANQMINPTLEYSPIEINDQLQELRVPNQ 235
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
H+G ++G+GG+ I EI +SG I V +R D S R++T+ G ++ I A ++ Q
Sbjct: 236 HMGAIIGKGGKRIGEIRMMSGCNIHV-ERSDADSKYGMRRLTLKGTKQQITMAAYLVNQT 294
Query: 327 VA 328
++
Sbjct: 295 IS 296
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + ++ + G +IGKGG + D + +SGA+I + S + P + +R I+G
Sbjct: 88 PITLTLVIPKNICGMIIGKGGEALKDLRVKSGAQINM--SADCLPKSDERTCQITGNNIS 145
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGT 120
+ +A+DL+I ++ E + + GT
Sbjct: 146 VTQAIDLLIGIMIKAAIDESKGEFKGT 172
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
R LV GA+IG+ G I ++ ARI++ + PG +R +MIS DE
Sbjct: 123 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKIL---DGPPGVPERAVMISAK-DEPDA 178
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKL----------RLIVPNSSCGSIIGKAGATIKS 146
+ +D LL +H G +L RL+VP+S GS+IGK GATIKS
Sbjct: 179 PLSPAVDGLL-RVHKRITDSSNGESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKS 237
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
D S++V++I +DR+V + G +A+ELI L + + + +
Sbjct: 238 IQDSSKSVVRIVENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLRKFLVDRSVLPLFE 297
Query: 207 TYAGVFFSGFHGMP-YGAVPPPVPAVPHNTAAHYGP 241
T+ + HGMP VPPP H+GP
Sbjct: 298 THMKM-----HGMPREQPVPPP---------QHWGP 319
>gi|389641821|ref|XP_003718543.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
gi|351641096|gb|EHA48959.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
Length = 483
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG ++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVS---DYQKGAVERILTVSGIVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E +E + T LRL++P+ GSIIGK GA IK + S A +
Sbjct: 184 KAFGLIIRTLNNEPLSEPSSAHSKT-YPLRLLIPHILIGSIIGKGGARIKEIQEASGARL 242
Query: 156 KIS 158
S
Sbjct: 243 NAS 245
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 46/326 (14%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 190 IRTLNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDS-- 247
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
P +++R +++ G D + A V LL +L+ D G + +
Sbjct: 248 CLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLN-----DRFG----------GPAASA 292
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+AG + + Q V + + YG D QM
Sbjct: 293 YATRAGGPVGAVPGGMQVVPYLPQPAGGNYGNRDNYGRRPDPRAGQMPPPAAHPYAPQNP 352
Query: 196 TLYSQ-TMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD 254
Q VP Y G YGA VPA PH H GP + G Q
Sbjct: 353 YAPHQPNPAVPPHY------GAQAGAYGAH---VPA-PH--VGHAGPQVHGAPHQPMHGQ 400
Query: 255 RTN----SLT--IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
SLT I + ++ +G ++G+GG+ I EI Q+SG+ IK+++ D ++ER VT
Sbjct: 401 MPGPGGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQD---NSNERLVT 457
Query: 309 ISGPQRSIRTAESMIMQKVAYASDRL 334
I+G + R A M+ ++ R+
Sbjct: 458 ITGTEECNRMALYMLYSRLESEKHRI 483
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P VHG P+ P + + N + GA+IGKGG IN+ + SG+ I+++
Sbjct: 387 PQVHGAPHQ-PMHGQMPGPGGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKIN 445
Query: 72 RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + +R++ I+GT + A+ ++ +L +E H
Sbjct: 446 EPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 481
>gi|343424730|emb|CBQ68268.1| related to poly(rC)-binding protein 3 [Sporisorium reilianum SRZ2]
Length = 436
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+R LVS AG +IGKGG+ + D + Q+G + +S+ PG DR++ ++GT+ I
Sbjct: 48 LVRALVSTKEAGIIIGKGGANVADLREQTGVKAGVSK---VVPGVHDRVLSVTGTLVGIA 104
Query: 96 RAVDLVIDKLLTE-LHAEDQAD-----DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
A L+ +L L+ QAD T +RL++ ++ G++IG+ G IK D
Sbjct: 105 DAFALIAKTILENPLNTPVQADGSPAESAAQSTSVRLLISHNLMGTVIGRQGLKIKHIQD 164
Query: 150 DSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
S A + S+ L S +R+V + G++D A+ I+ L+ED SQ + +
Sbjct: 165 LSGARMVASKEMLPQS----TERVVEVQGSVDSIRVAIHEIVKCLAEDWDRSQNVVL 217
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 47/210 (22%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+R +V G IIGK GA + + + +S++ G++DR++++TGTL
Sbjct: 49 VRALVSTKEAGIIIGKGGANVADLREQTGVKAGVSKV---VPGVHDRVLSVTGTLVGIAD 105
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI + E+ L + P P +AA
Sbjct: 106 AFALIAKTILENPLNT-------------------------PVQADGSPAESAAQ----- 135
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+ S+ + ++ +G V+GR G I I +SGAR+ S + ++
Sbjct: 136 ------------STSVRLLISHNLMGTVIGRQGLKIKHIQDLSGARMVASK--EMLPQST 181
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASDR 333
ER V + G SIR A I++ +A DR
Sbjct: 182 ERVVEVQGSVDSIRVAIHEIVKCLAEDWDR 211
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSR-SHEFFPGTTDRIIMISGTIDEILRAVDLVID 103
+ G +IGKGGS I + + SG+RI +++ H+ T +R+ I GT + +A+ L+ +
Sbjct: 339 MVGCIIGKGGSKITEIRRLSGSRISIAKVPHDE---TGERMFTIQGTPEANEKALFLLYN 395
Query: 104 KLLTE 108
+L TE
Sbjct: 396 QLETE 400
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 7 LNDDPNITLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 60
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT---KLRLIVPNSSCGSIIGKAGA 142
++G + I +A L+ K + +G LRLIVP S CGS+IGK G+
Sbjct: 61 TVTGPTNAIFKAFSLICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGS 120
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
IK + + A I+++ +R VT++GT + + + I + E +
Sbjct: 121 KIKEIREVTGASIQVA--SEMLPNSTERAVTISGTSEAITQCIYHICCVMLESP--PKGA 176
Query: 203 TVPY 206
T+PY
Sbjct: 177 TIPY 180
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 54/202 (26%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
DD +RLI+ GSIIGK G +K F ++S A I IS D S +R+VT+T
Sbjct: 9 DDPNITLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINIS--DGS---CPERIVTVT 63
Query: 176 GTLDEQMRALELILLKLSE-DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHN 234
G + +A LI K E L S G G+P PP+
Sbjct: 64 GPTNAIFKAFSLICKKFEEFQELQSG-------------GGSMGIPK----PPI------ 100
Query: 235 TAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD 294
+L + V G ++G+GG I EI +++GA I+V+
Sbjct: 101 -----------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAS 137
Query: 295 RGDFFSGTSERKVTISGPQRSI 316
+ ++ER VTISG +I
Sbjct: 138 --EMLPNSTERAVTISGTSEAI 157
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
M R N+ + T ++ + + + +G ++G+ G + + SGA+I +SD
Sbjct: 1 MEDRHLLNDDPNITLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-----GSC 55
Query: 303 SERKVTISGPQRSIRTAESMIMQK 326
ER VT++GP +I A S+I +K
Sbjct: 56 PERIVTVTGPTNAIFKAFSLICKK 79
>gi|440469758|gb|ELQ38855.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482264|gb|ELQ62771.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 490
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG ++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVS---DYQKGAVERILTVSGIVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E +E + T LRL++P+ GSIIGK GA IK + S A +
Sbjct: 184 KAFGLIIRTLNNEPLSEPSSAHSKT-YPLRLLIPHILIGSIIGKGGARIKEIQEASGARL 242
Query: 156 KIS 158
S
Sbjct: 243 NAS 245
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 138/319 (43%), Gaps = 46/319 (14%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 190 IRTLNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDS-- 247
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
P +++R +++ G D + A V LL +L+ D G + +
Sbjct: 248 CLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLN-----DRFG----------GPAASA 292
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+AG + + Q V + + YG D QM
Sbjct: 293 YATRAGGPVGAVPGGMQVVPYLPQPAGGNYGNRDNYGRRPDPRAGQMPPPAAHPYAPQNP 352
Query: 196 TLYSQ-TMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD 254
Q VP Y G YGA VPA PH H GP + G Q
Sbjct: 353 YAPHQPNPAVPPHY------GAQAGAYGAH---VPA-PH--VGHAGPQVHGAPHQPMHGQ 400
Query: 255 RTN----SLT--IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
SLT I + ++ +G ++G+GG+ I EI Q+SG+ IK+++ D ++ER VT
Sbjct: 401 MPGPGGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQD---NSNERLVT 457
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+G + R A M+ ++
Sbjct: 458 ITGTEECNRMALYMLYSRL 476
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P VHG P+ P + + N + GA+IGKGG IN+ + SG+ I+++
Sbjct: 387 PQVHGAPHQ-PMHGQMPGPGGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKIN 445
Query: 72 RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ + +R++ I+GT + A+ ++ +L
Sbjct: 446 EPQD---NSNERLVTITGTEECNRMALYMLYSRL 476
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 142/320 (44%), Gaps = 34/320 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ PG DR++ ++G + R
Sbjct: 45 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVPGVHDRVLTVTGPLQGTAR 101
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A LV LL ++ ++ GT +RL++ ++ G+IIG+ G IK D S
Sbjct: 102 AYALVAKGLLEGAPQMGMGGIVNNNGTH-PVRLLISHNQMGTIIGRQGLKIKHIQDASGV 160
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA-G 210
+ V + L S +R+V + GT + +A+ I L +D T T+ Y A
Sbjct: 161 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAVWEIGKCLIDD-WQRGTGTILYNPAVR 215
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAH-----------YG----PNMGGRKFQNNKDD- 254
G M +V + P+N + YG P+ R + +D
Sbjct: 216 ASVGGSTSMNTSSVGNGYNSRPYNRTGNGADFSDGQSGGYGRRSNPDTSNRGYPLVTEDG 275
Query: 255 -RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+ I + + +G ++GRGG I EI + SGARI ++ T ER TI G
Sbjct: 276 EEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA--PHDETGERMFTIMGSA 333
Query: 314 RSIRTAESMIMQKVAYASDR 333
++ A ++ + + R
Sbjct: 334 QANEKALYLLYENLEAEKTR 353
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 88/229 (38%), Gaps = 51/229 (22%)
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+DE + V D+ E+ + + + + LR IV + G IIGKAG + D+
Sbjct: 12 VDETMADAMNVADEGDMEITPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDE 71
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
+ +S++ G++DR++T+TG L RA L+ L E
Sbjct: 72 TGVKAGVSKV---VPGVHDRVLTVTGPLQGTARAYALVAKGLLE---------------- 112
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGF 270
GA P MG NN + T+ + + ++ +G
Sbjct: 113 -----------GA-----------------PQMGMGGIVNN--NGTHPVRLLISHNQMGT 142
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTA 319
++GR G I I SG R+ + ++ER V + G I A
Sbjct: 143 IIGRQGLKIKHIQDASGVRMVAQK--EMLPQSTERIVEVQGTPEGIEKA 189
>gi|126314788|ref|XP_001377551.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2,
partial [Monodelphis domestica]
Length = 504
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 158/352 (44%), Gaps = 43/352 (12%)
Query: 7 SYVPSPDVHG------------KRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGG 54
SY+P D H +R +P S + P + P +R LV GA+IGK G
Sbjct: 57 SYIPDEDGHAPQRFRRGASSSRERGRSPGGSGQAKPPDFP--LRILVPTQFVGAIIGKEG 114
Query: 55 STINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQ 114
TI + Q+ +++ + R G +++ + I + + A +++ + E
Sbjct: 115 LTIKNLTKQTQSKVDIHRKEN--AGASEKPVTIHASPEGSSEACRRILEIMQKEADETKA 172
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVT 173
++V L+++ NS G +IGK G +K D+ I IS L D + Y +R +T
Sbjct: 173 VEEV----PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYN-PERTIT 227
Query: 174 LTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAV 224
+ GT++ A I+ KL E T+ Q +P + G+F +G +P A
Sbjct: 228 VKGTIEACSSAEVEIMRKLREAYENDMLTVNQQGSLIPGLNLSALGIFSTGLSMLPSAAG 287
Query: 225 PPPVPAVPHNT-AAH-------YG-PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
P A +N A+H YG P +G Q+ ++ + + + + +G ++G+
Sbjct: 288 PRGAAAASYNPFASHSAYLSGLYGAPQIGVFPHQHPVPEQ-EVVYLFIPTQAVGAIIGKK 346
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ + A IK++ G ER V I+GP + A+ I K+
Sbjct: 347 GHHIKQLARFARASIKIAPAEGPDVG--ERMVIITGPPEAQFKAQGRIFGKL 396
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 56/213 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK G TIK+ +Q+ + I R +++ G +++ VT+ + +
Sbjct: 97 LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENA--GASEKPVTIHASPEGSSE 154
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A IL + ++ ++ V VP AH
Sbjct: 155 ACRRILEIMQKEADETKA--------------------------VEEVPLKILAH----- 183
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NSL +G ++G+ GRN+ +I Q +G +I +S D
Sbjct: 184 -------------NSL--------VGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNP 222
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ AY +D L
Sbjct: 223 ERTITVKGTIEACSSAEVEIMRKLREAYENDML 255
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + + + GA+IGK G I + A I+++ + P +R+++I+G
Sbjct: 323 PVPEQEVVYLFIPTQAVGAIIGKKGHHIKQLARFARASIKIAPAE--GPDVGERMVIITG 380
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ +A + KL E + + ++V K +R VP+S+ G +IGK G T+ +
Sbjct: 381 PPEAQFKAQGRIFGKLKEE-NFFNPKEEVKLKAHIR--VPSSAAGRVIGKGGKTVNELQN 437
Query: 150 DSQAVIKISR 159
+ A + + R
Sbjct: 438 LTSAEVIVPR 447
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK G IK ++A IKI+ + G +R+V +TG + Q +A
Sbjct: 332 LFIPTQAVGAIIGKKGHHIKQLARFARASIKIAPAEGPDVG--ERMVIITGPPEAQFKAQ 389
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 390 GRIFGKLKEENFFN 403
>gi|113931242|ref|NP_001039068.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89273953|emb|CAJ81328.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 59/293 (20%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 8 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGT 65
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
D I++ V + +L ++ G R P + G II AG +++
Sbjct: 66 PDAIIQCVKQICVVML-------ESPPKGATIPYR---PKPASGPII-FAGGQVRA---- 110
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
I S +H+ + Q L KL + + P+T G
Sbjct: 111 --ETILASAGNHTVLAQPQPAPAF--AIQGQYAIPHPDLTKLHQLAMQH----TPFTPLG 162
Query: 211 VFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGF 270
GF G+ + T+S + + ++ IG
Sbjct: 163 QTTPGFPGL-------------------------------DATSPTSSHELTIPNDLIGC 191
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++GR G I EI Q+SGA+IK+++ + G ER+VTI+G +I A+ +I
Sbjct: 192 IIGRQGSKINEIRQMSGAQIKIANASE---GNGERQVTITGSPANISLAQYLI 241
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ GS IN+ + SGA+I+++ + E G +R + I+G+ I A
Sbjct: 181 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASE---GNGERQVTITGSPANISLA 237
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRL 126
+I+ L Q V T L +
Sbjct: 238 -QYLINASLEMAKLSTQTASVTTPVDLNM 265
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G T+ + +SGARI +S + +RI+ I+G + I R ++ K
Sbjct: 9 GSIIGKKGETVKKIREESGARINISEGS-----SPERIVTITGATEAIFRTFAMIAQKFE 63
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDH 162
+++A +V +K LRL+ P S CGS+IGK G+ IK + + A ++++ L
Sbjct: 64 EDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPD 123
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
S +R VT++GT + + I + E + T+PY
Sbjct: 124 S----TERAVTISGTPQAITQCVRHICSVMLESP--PKGATIPY 161
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 53/183 (28%)
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
GSIIGK G T+K ++S A I IS +R+VT+TG + R +I K
Sbjct: 9 GSIIGKKGETVKKIREESGARINISEGSSP-----ERIVTITGATEAIFRTFAMIAQKFE 63
Query: 194 EDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD 253
ED + A N+ P +
Sbjct: 64 ED--------------------------------INAAMSNSNVTSKPPV---------- 81
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+L + G ++G+GG I EI + +GA+++V+ GD ++ER VTISG
Sbjct: 82 ----TLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVA--GDMLPDSTERAVTISGTP 135
Query: 314 RSI 316
++I
Sbjct: 136 QAI 138
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R + G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 80 PVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQV--AGDMLPDSTERAVTISGTPQA 137
Query: 94 ILRAVDLVIDKLL 106
I + V + +L
Sbjct: 138 ITQCVRHICSVML 150
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + SGA+I +S +RI+ I+G +D I +
Sbjct: 25 IRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG-----SCPERIVTITGNVDTINK 79
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++ +K ++ A + T +RLIVP + CGS+IGK G+ IK + + A I+
Sbjct: 80 AFSMICNKFQEDMQALPNSVPKPPIT-MRLIVPATQCGSLIGKGGSKIKEIREATGASIQ 138
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
++ +R VT++G+ D + ++ I L E + T+PY F
Sbjct: 139 VA--SEMLPSSTERAVTISGSADAIVLCMQHICHILLEAP--PKGTTLPYRPKPTF 190
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 86/219 (39%), Gaps = 60/219 (27%)
Query: 111 AEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDR 170
A V +RL++ GSIIGK G IKS D S A I IS D S +R
Sbjct: 12 ASSSVPQVSVILTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINIS--DGS---CPER 66
Query: 171 LVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPA 230
+VT+TG +D +A +I K ED +P PP+
Sbjct: 67 IVTITGNVDTINKAFSMICNKFQED--------------------MQALPNSVPKPPI-- 104
Query: 231 VPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARI 290
++ + V G ++G+GG I EI + +GA I
Sbjct: 105 ---------------------------TMRLIVPATQCGSLIGKGGSKIKEIREATGASI 137
Query: 291 KVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAY 329
+V+ + ++ER VTISG +I + MQ + +
Sbjct: 138 QVAS--EMLPSSTERAVTISGSADAI----VLCMQHICH 170
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
+++L + + P +R +V G++IGKGGS I + + +GA IQ+ + E P +T+
Sbjct: 92 MQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV--ASEMLPSSTE 149
Query: 83 RIIMISGTIDEILRAVDLVIDKLL 106
R + ISG+ D I+ + + LL
Sbjct: 150 RAVTISGSADAIVLCMQHICHILL 173
>gi|396578134|ref|NP_001257528.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 2
[Rattus norvegicus]
Length = 524
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 141/310 (45%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 121 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 178
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A++V L+++ N G +IGK G +K ++ I
Sbjct: 179 ACRMILEIMQKEADETKLAEEV----PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKIT 234
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 235 ISSLQDLSIYN-PERTITVKGTIEACASAEMEIMKKLREAFENDMLAVNQQANLIPGLNL 293
Query: 207 TYAGVFFSGFHGMPYGAV-------PPPVPAVPHN--TAAHYGPNMGGRKFQNNKDDRTN 257
+ G+F +G +P A PP P H+ ++ Y + G ++
Sbjct: 294 SALGIFSTGLSVLPPPAGPRGAPPSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQE 353
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
++++ + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 354 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 411
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 412 KAQGRIFGKL 421
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 121 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 178
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ VP AH G
Sbjct: 179 ACRMILEIMQKEADETKLAE-----------------------------EVPLKILAHNG 209
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 210 --------------------------FVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 243
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 244 YNPERTITVKGTIEACASAEMEIMKKLREAFENDML 279
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 355 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 412
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 413 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 469
Query: 157 ISR 159
+ R
Sbjct: 470 VPR 472
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 357 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 414
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 415 GRIFGKLKEENFFN 428
>gi|348517827|ref|XP_003446434.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Oreochromis niloticus]
Length = 601
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 27/308 (8%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P +R LV GA+IGK G+TI + Q+ ++I + R G ++ I
Sbjct: 191 MPSKPPHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKPI 248
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
I T + A +++D + E AD+V L+++ N+ G +IGK G +K
Sbjct: 249 SIHSTPEGCSAACRMILDIMHQEAKDTKTADEV----PLKIMAHNNFVGRLIGKEGRNLK 304
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYS 199
D+ I IS L +R +T+ G+++ +A I+ K+ E +
Sbjct: 305 KIEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCQAEVEIMKKVREAYENDIAAMNQ 364
Query: 200 QTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSL 259
QT +P G+ GA+ P+ + G +GG + ++
Sbjct: 365 QTHLIP------------GLNLGAL-GLFPSSSNMPPPPPGNAVGGTPYGCFGAPEQETV 411
Query: 260 TIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTA 319
+ + + +G ++G+ G++I ++S+ +GA IK++ + R V ++GP + A
Sbjct: 412 HVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAES--PDSKMRMVIVTGPPEAQFKA 469
Query: 320 ESMIMQKV 327
+ I K+
Sbjct: 470 QGRIYGKL 477
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 249 QNNKDDRTNS---LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
Q KD +T L I + +G ++G+ GRN+ +I Q + +I +S D ER
Sbjct: 270 QEAKDTKTADEVPLKIMAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPER 329
Query: 306 KVTISGPQRSIRTAESMIMQKV--AYASD 332
+T+ G + AE IM+KV AY +D
Sbjct: 330 TITVKGSIEACCQAEVEIMKKVREAYEND 358
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P + R+++++G + +A + KL
Sbjct: 421 GAIIGKKGQHIKQLSRFAGASIKIAPAES--PDSKMRMVIVTGPPEAQFKAQGRIYGKLK 478
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + ++V +T +++ ++ G +IGK G T+ + + A + + R
Sbjct: 479 EE-NFFGPKEEVKLETHIKMAA--AAAGRVIGKGGKTVNELQNLTAAEVVVPR 528
>gi|341891904|gb|EGT47839.1| CBN-PES-4 protein [Caenorhabditis brenneri]
Length = 438
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + +SGA+I +S +RI+ I+GT+ I +
Sbjct: 78 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGS-----CPERIVTITGTLGVIGK 132
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++V +K ++ + T +R+IVP + CGS+IGK G+ IK + + A I+
Sbjct: 133 AFNMVCNKFEEDMLLLPNSVPKPPIT-MRVIVPATQCGSLIGKGGSKIKDIREATGASIQ 191
Query: 157 ISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
++ L HS +R VTL+GT D A+ L + ++ + L
Sbjct: 192 VASEMLPHS----TERAVTLSGTAD----AINLCMTQVCQILL 226
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G++IGKGGS I D + +GA IQ++ E P +T+R + +SGT D
Sbjct: 156 PITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVAS--EMLPHSTERAVTLSGTADA 213
Query: 94 ILRAVDLVIDKLL 106
I + V LL
Sbjct: 214 INLCMTQVCQILL 226
>gi|396578132|ref|NP_001257527.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 1
[Rattus norvegicus]
gi|149019899|gb|EDL78047.1| similar to IGF-II mRNA-binding protein 2 (predicted) [Rattus
norvegicus]
Length = 592
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 141/310 (45%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 246
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A++V L+++ N G +IGK G +K ++ I
Sbjct: 247 ACRMILEIMQKEADETKLAEEV----PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKIT 302
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 303 ISSLQDLSIYN-PERTITVKGTIEACASAEMEIMKKLREAFENDMLAVNQQANLIPGLNL 361
Query: 207 TYAGVFFSGFHGMPYGAV-------PPPVPAVPHN--TAAHYGPNMGGRKFQNNKDDRTN 257
+ G+F +G +P A PP P H+ ++ Y + G ++
Sbjct: 362 SALGIFSTGLSVLPPPAGPRGAPPSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQE 421
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
++++ + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 422 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 479
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 480 KAQGRIFGKL 489
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 246
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ VP AH G
Sbjct: 247 ACRMILEIMQKEADETKLAEE-----------------------------VPLKILAHNG 277
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 278 --------------------------FVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 311
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 312 YNPERTITVKGTIEACASAEMEIMKKLREAFENDML 347
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 423 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 480
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 481 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 537
Query: 157 ISR 159
+ R
Sbjct: 538 VPR 540
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 425 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 482
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 483 GRIFGKLKEENFFN 496
>gi|358368755|dbj|GAA85371.1| KH domain RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 360
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 142/329 (43%), Gaps = 51/329 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ PG DR++ ++G ++ R
Sbjct: 45 LRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSK---VVPGVHDRVLTVTGPLNGTAR 101
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A LV LL ++ + GT +RL++ ++ G+IIG+ G IK D S
Sbjct: 102 AYALVAKGLLEGAPQMGMGGIVSNNGTH-PVRLLISHNQMGTIIGRQGLKIKHIQDASGV 160
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT-------LYSQTM-- 202
+ V + L S +R+V + GT + +A+ I L +D LY+ +
Sbjct: 161 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRA 216
Query: 203 ---TVPYTYA--GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD---- 253
T P T +G++ PY A + GG ++N D
Sbjct: 217 SVGTTPSTSTMNQSVGNGYNSRPYNRT---------GNGADFSDQSGGYGRRSNPDTSNR 267
Query: 254 ---------DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE 304
+ + I + + +G ++GRGG I EI + SGARI ++ T E
Sbjct: 268 GYPLVTEDGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA--PHDETGE 325
Query: 305 RKVTISGPQRSIRTAESMIMQKVAYASDR 333
R TI G ++ A ++ + + R
Sbjct: 326 RMFTIMGSAQANEKALYLLYENLEAEKTR 354
>gi|260811882|ref|XP_002600650.1| hypothetical protein BRAFLDRAFT_130041 [Branchiostoma floridae]
gi|229285939|gb|EEN56662.1| hypothetical protein BRAFLDRAFT_130041 [Branchiostoma floridae]
Length = 629
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 128/304 (42%), Gaps = 43/304 (14%)
Query: 58 NDFQSQS-GARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD 116
N QSQ R+ + R P ++ I I G+ D A +++ + E A Q+
Sbjct: 225 NQGQSQDFPLRVDVHRKENIGP---EKPITIYGSADSCSEACRKIVEIMQQESVATGQST 281
Query: 117 DVGTK-------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH-SYYGLN 168
D T L+L+ NS G +IG+ G T+K M DS A I IS + Y +
Sbjct: 282 DDETSDPPSSEDVPLKLLAHNSLVGRLIGRNGTTLKKIMQDSGARITISNFQELTLYNM- 340
Query: 169 DRLVTLTGTLDEQMRALELIL--LKLSEDTLYSQTMTVPYTYAGVF-FSGFHGMPYGAVP 225
+R +T+ GTLD+Q +A +LI+ L++S D M + G+ + G+ G
Sbjct: 341 ERTITILGTLDDQCKAEKLIMQKLRVSYDADMQNIMQHQSMFPGLNPMAMLSGLLPGLPN 400
Query: 226 PPVPAVPHNTAAHYGPNMGGRKFQNN----------------------KDDRTNSLTIGV 263
P A P+N GP Q N + + + V
Sbjct: 401 PNSRANPYN-----GPMTEPNAMQTNPAMFPGILPPAAAALAMQQQMQQPQPSEKSDLWV 455
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+G ++G GG+NI S+ + A IK++ G +ERKV+I+G + + +
Sbjct: 456 PGGVVGALIGPGGQNIRLASRQANATIKIAPADQSAQGQAERKVSITGSPDAQWKVQYWV 515
Query: 324 MQKV 327
KV
Sbjct: 516 FSKV 519
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S P+ + ++ L N L G +IG+ G+T+ SGARI +S E +R I
Sbjct: 286 SDPPSSEDVPLKLLAHNSLVGRLIGRNGTTLKKIMQDSGARITISNFQELTLYNMERTIT 345
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQ 114
I GT+D+ +A L++ KL A+ Q
Sbjct: 346 ILGTLDDQCKAEKLIMQKLRVSYDADMQ 373
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
V + GA+IG GG I Q+ A I+++ + + G +R + I+G+ D +
Sbjct: 453 LWVPGGVVGALIGPGGQNIRLASRQANATIKIAPADQSAQGQAERKVSITGSPDAQWKVQ 512
Query: 99 DLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
V K+ E +A DV + + VP++ G IIGK GA+++ ++ A I++
Sbjct: 513 YWVFSKVGQEGYA---GSDV-VVLRAEIPVPSNMVGRIIGKRGASVQGLQKNTSARIEVP 568
Query: 159 R 159
R
Sbjct: 569 R 569
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L VP G++IG G I+ + A IKI+ D S G +R V++TG+ D Q +
Sbjct: 453 LWVPGGVVGALIGPGGQNIRLASRQANATIKIAPADQSAQGQAERKVSITGSPDAQWKVQ 512
Query: 186 ELILLKLSED 195
+ K+ ++
Sbjct: 513 YWVFSKVGQE 522
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK- 326
+G ++GR G + +I Q SGARI +S+ + ER +TI G AE +IMQK
Sbjct: 305 VGRLIGRNGTTLKKIMQDSGARITISNFQELTLYNMERTITILGTLDDQCKAEKLIMQKL 364
Query: 327 -VAYASD 332
V+Y +D
Sbjct: 365 RVSYDAD 371
>gi|313229517|emb|CBY18332.1| unnamed protein product [Oikopleura dioica]
Length = 488
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 133/348 (38%), Gaps = 75/348 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L G +IG+ GS I + +SG +++ + + +RI+ +SG+ + R
Sbjct: 25 IRLLFKGNQVGTLIGRKGSKIMQIREESGCEVKIKGNEK----DIERIVSVSGSPAGVTR 80
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A+ V + + +L+ L +IVP CGSIIGK G IK + + +K
Sbjct: 81 AIGKVGEFVEADLNDGLTGRTTKIPVTLHMIVPTGQCGSIIGKGGFRIKEIREKTGCNVK 140
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELIL-LKLSEDTLYSQTMTVPYTYAGVFFSG 215
I+ + ++L+TL G + + I + + E T P +Y G
Sbjct: 141 IA--NELLPASTEKLITLYGEPRVIQQCVGSICQVMIEEGQERKCTPYTPASYGPSPVFG 198
Query: 216 FHGMPYGA----------------------------VPPPVPAVPHNTA----------- 236
GMP A PP P P N A
Sbjct: 199 MEGMPRNASQYPPPPAGNAPPQYPYPHSGHSGAPPSAPPTQPGYPPNWAPGHPPMPNPPA 258
Query: 237 AHYG---PNMGGRKFQNNKDD----------------RTNSLTIGVADEHI-----GFVV 272
YG P G + N D T L+ GV + H+ G V+
Sbjct: 259 PAYGQVYPGYGASSYPNPSDPAFILRDTNLDHFKVKLATKILSEGVLEVHVDKTCMGAVI 318
Query: 273 GRGGRNIMEISQISGARIKVSD-RGDFFSGTSERKVTISGPQRSIRTA 319
GRGG I E+ +S IK+ + GD ++ R++TISG + I A
Sbjct: 319 GRGGSRIGEVRMLSTHDIKIHEVDGD----STFRRITISGDKNHIDKA 362
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ T+ P + +V G++IGKGG I + + ++G +++ ++E P +T+++I
Sbjct: 97 LTGRTTKIPVTLHMIVPTGQCGSIIGKGGFRIKEIREKTGCNVKI--ANELLPASTEKLI 154
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
+ G I + V + ++ E
Sbjct: 155 TLYGEPRVIQQCVGSICQVMIEE 177
>gi|357465707|ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492186|gb|AES73389.1| Far upstream element-binding protein [Medicago truncatula]
Length = 1145
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 20/164 (12%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R + P + R++ + GT D + A
Sbjct: 89 KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDAVSSA 148
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLI-----------VPNSSCGSIIGKAGATIKS 146
+KL+ E+ AE +A G T+ R++ +PN+ G IIGK G TIKS
Sbjct: 149 -----EKLINEVLAEAEAGASGGGTR-RMVAQSGGDEFVMQIPNNKVGLIIGKGGETIKS 202
Query: 147 FMDDSQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELI 188
+ A I++ L H G +R + + GT D+ A +L+
Sbjct: 203 MQASTGARIQVIPL-HPPPGDTSTERTLKIDGTPDQIESAKQLV 245
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 50/205 (24%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G +IGK G TIK S A I+++R + R+V L GT D A
Sbjct: 89 KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDAVSSA 148
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG 244
+LI L+E AG G M G
Sbjct: 149 EKLINEVLAE------------AEAGASGGGTRRMV--------------------AQSG 176
Query: 245 GRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV----SDRGDFFS 300
G +F + + + +G ++G+GG I + +GARI+V GD
Sbjct: 177 GDEF-----------VMQIPNNKVGLIIGKGGETIKSMQASTGARIQVIPLHPPPGDT-- 223
Query: 301 GTSERKVTISGPQRSIRTAESMIMQ 325
++ER + I G I +A+ ++ Q
Sbjct: 224 -STERTLKIDGTPDQIESAKQLVNQ 247
>gi|321257616|ref|XP_003193652.1| cytoplasm protein [Cryptococcus gattii WM276]
gi|317460122|gb|ADV21865.1| Cytoplasm protein, putative [Cryptococcus gattii WM276]
Length = 367
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 160/367 (43%), Gaps = 70/367 (19%)
Query: 9 VPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARI 68
+PSPD G E +R LVS AG +IGK G+TI + +G +
Sbjct: 19 LPSPDAQG--------------AEHQLSLRSLVSTKEAGIIIGKSGATIAAIRDSTGVKA 64
Query: 69 QLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA---DDVGTKTKLR 125
+S+ G DR++ ++G ++ + A V +LL E D + VG+ T +R
Sbjct: 65 GVSK---VVQGVQDRVLSVTGDLEGVASAYAEVA-RLLLETPLSDSSLPPPPVGSFTSIR 120
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMR 183
L++ ++ G++IG++G IK D S A + S+ L S +R+V + G++D
Sbjct: 121 LLISHNLMGTVIGRSGLKIKQIQDMSGARMVASKEMLPQS----TERVVEVQGSVDAIKT 176
Query: 184 ALELILLKLSEDT-----------------------LYSQTMT-----VPYTYAGVFFSG 215
A+ I L ED L +Q +T + T F G
Sbjct: 177 AVLEIGKCLLEDWDRGAGTVLYHPGAAGDAGVLAGGLGAQAVTGSTGGIRRTSVAAGFGG 236
Query: 216 FHG--MPY--GAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFV 271
+ G P G++ + P + P+ G + N+ + RT +++I + +G +
Sbjct: 237 YSGDRRPSRGGSI-----SGPSGVSGERKPSEGPQVNLNDPNLRTQNISI--PSDMVGCI 289
Query: 272 V--GRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAY 329
+ GRGG I EI ++SG+RI ++ T ER TI G + A ++ ++
Sbjct: 290 IISGRGGSKITEIRRLSGSRISIAKV--PHDETGERMFTIQGTPEATERALMLLYSQLES 347
Query: 330 ASDRLMD 336
+R ++
Sbjct: 348 EKERRVN 354
>gi|297825693|ref|XP_002880729.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
gi|297326568|gb|EFH56988.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
Length = 634
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G +IGKGG TI Q QSGA+IQ++R + P T R + ++GT D+I +A L+ D +L
Sbjct: 146 GVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNATTRTVDLTGTPDQISKAEQLITD-VL 204
Query: 107 TELHAEDQADDVGTKT---------KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
E A + A G + + +PN+ G IIGK G TIKS + A I++
Sbjct: 205 QEAEAGNTAGSGGGGRRMGGQAGADQFVMKIPNNKVGLIIGKGGETIKSMQAKTGARIQV 264
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 139/325 (42%), Gaps = 47/325 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ PG DR++ ++G + R
Sbjct: 45 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVPGVHDRVLTVTGPLQGTAR 101
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A LV LL ++ + GT +RL++ ++ G+IIG++G IK D S
Sbjct: 102 AYALVAKGLLEGAPQMGMGGVVSNNGTH-PVRLLISHNQMGTIIGRSGLKIKHIQDASGV 160
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT-------LYSQTMTV 204
+ V + L S +R+V + GT + +A+ I L +D LY+ +
Sbjct: 161 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRA 216
Query: 205 PYTYAGV---FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD-------- 253
A V +G+ PY A + GG ++N D
Sbjct: 217 SVGTAPVNQNVGNGYSSRPYNRT---------GNGADFSDQSGGYGRRSNPDTSNRGYPL 267
Query: 254 -----DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + I + + +G ++GR G I EI + SGARI ++ T ER T
Sbjct: 268 VTEDGEEIQTQNISIPADMVGCIIGRAGSKITEIRRSSGARISIAKA--PHDDTGERMFT 325
Query: 309 ISGPQRSIRTAESMIMQKVAYASDR 333
I G ++ A ++ + + R
Sbjct: 326 IMGSAQANEKALYLLYENLEAEKTR 350
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 64/231 (27%)
Query: 101 VIDKLLTE-LHAEDQAD-DVGTKTK---------LRLIVPNSSCGSIIGKAGATIKSFMD 149
V+D+ +T+ ++ D+ D D+ KT+ LR IV + G IIGKAG + D
Sbjct: 11 VVDETMTDAVNMVDEGDMDITPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRD 70
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
++ +S++ G++DR++T+TG L RA L+ L E
Sbjct: 71 ETGVKAGVSKV---VPGVHDRVLTVTGPLQGTARAYALVAKGLLE--------------- 112
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG-GRKFQNNKDDRTNSLTIGVADEHI 268
GA P MG G NN T+ + + ++ +
Sbjct: 113 ------------GA-----------------PQMGMGGVVSNNG---THPVRLLISHNQM 140
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTA 319
G ++GR G I I SG R+ + ++ER V + G I A
Sbjct: 141 GTIIGRSGLKIKHIQDASGVRMVAQK--EMLPQSTERIVEVQGTPEGIEKA 189
>gi|326430280|gb|EGD75850.1| hypothetical protein PTSG_07967 [Salpingoeca sp. ATCC 50818]
Length = 510
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 134/314 (42%), Gaps = 64/314 (20%)
Query: 20 TAPVKSLSSDPTEKPTYIRFL-----VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
TA + +S+P + P + V++ G +IG+ GS I ++ SG ++ +
Sbjct: 129 TAATEQANSNPADAPLAEGHVLETVNVADHQVGRLIGREGSNIRQMEALSGCQVNVP--A 186
Query: 75 EFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCG 134
E PGT+ R I + G+ E +R ++++ + E + A T TK+ I P+ G
Sbjct: 187 ECEPGTSVRKITLRGS-PESVRYCKQMLEQKIREDGGDPSAPATETITKIAYI-PDDHVG 244
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+IG+ G+TI+ + S A + I++ G R VT+TGT + + ELI K+S
Sbjct: 245 RVIGRQGSTIRQIQELSGAHMDIAK--ECRPGEYQREVTVTGTPAQVEKCEELIRKKVSG 302
Query: 195 DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD 254
++L PP P
Sbjct: 303 ESL----------------------------PPAPT-----------------------R 311
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
N I + DE +G ++G+GG I E+ SGA + V+ + GT++R++ + G +
Sbjct: 312 SANDTIITIPDEMVGRIIGKGGCTIRELQDNSGAHMDVAKAPN--PGTNKREIVVRGQPQ 369
Query: 315 SIRTAESMIMQKVA 328
I +I K+A
Sbjct: 370 QIAYCTYLINTKIA 383
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ TE T I ++ + + G VIG+ GSTI Q SGA + +++ E PG R +
Sbjct: 225 SAPATETITKIAYIPDDHV-GRVIGRQGSTIRQIQELSGAHMDIAK--ECRPGEYQREVT 281
Query: 87 ISGTIDEILRAVDLVIDKLLTEL---HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGAT 143
++GT ++ + +L+ K+ E A+D + +P+ G IIGK G T
Sbjct: 282 VTGTPAQVEKCEELIRKKVSGESLPPAPTRSANDT------IITIPDEMVGRIIGKGGCT 335
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
I+ D+S A + +++ + G N R + + G + LI K++E
Sbjct: 336 IRELQDNSGAHMDVAKAPNP--GTNKREIVVRGQPQQIAYCTYLINTKIAE 384
>gi|326430279|gb|EGD75849.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
Length = 455
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 134/314 (42%), Gaps = 64/314 (20%)
Query: 20 TAPVKSLSSDPTEKPTYIRFL-----VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
TA + +S+P + P + V++ G +IG+ GS I ++ SG ++ +
Sbjct: 129 TAATEQANSNPADAPLAEGHVLETVNVADHQVGRLIGREGSNIRQMEALSGCQVNVP--A 186
Query: 75 EFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCG 134
E PGT+ R I + G+ E +R ++++ + E + A T TK+ I P+ G
Sbjct: 187 ECEPGTSVRKITLRGS-PESVRYCKQMLEQKIREDGGDPSAPATETITKIAYI-PDDHVG 244
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+IG+ G+TI+ + S A + I++ G R VT+TGT + + ELI K+S
Sbjct: 245 RVIGRQGSTIRQIQELSGAHMDIAK--ECRPGEYQREVTVTGTPAQVEKCEELIRKKVSG 302
Query: 195 DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD 254
++L PP P
Sbjct: 303 ESL----------------------------PPAPT-----------------------R 311
Query: 255 RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQR 314
N I + DE +G ++G+GG I E+ SGA + V+ + GT++R++ + G +
Sbjct: 312 SANDTIITIPDEMVGRIIGKGGCTIRELQDNSGAHMDVAKAPN--PGTNKREIVVRGQPQ 369
Query: 315 SIRTAESMIMQKVA 328
I +I K+A
Sbjct: 370 QIAYCTYLINTKIA 383
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ TE T I ++ + + G VIG+ GSTI Q SGA + +++ E PG R +
Sbjct: 225 SAPATETITKIAYIPDDHV-GRVIGRQGSTIRQIQELSGAHMDIAK--ECRPGEYQREVT 281
Query: 87 ISGTIDEILRAVDLVIDKLLTEL---HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGAT 143
++GT ++ + +L+ K+ E A+D + +P+ G IIGK G T
Sbjct: 282 VTGTPAQVEKCEELIRKKVSGESLPPAPTRSANDT------IITIPDEMVGRIIGKGGCT 335
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
I+ D+S A + +++ + G N R + + G + LI K++E
Sbjct: 336 IRELQDNSGAHMDVAKAPNP--GTNKREIVVRGQPQQIAYCTYLINTKIAE 384
>gi|325191228|emb|CCA26015.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 534
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G +IG+GG TI D Q++SGA IQ+ R E T DR + I+GT + + A L+ + L
Sbjct: 180 GYIIGRGGETIRDLQARSGAHIQIVREEEGAAFTPDRFVSIAGTEEAVESAKKLIQNLLD 239
Query: 107 TELHAEDQADDV--------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
DD G++T L ++VPN G +IG+ GATI+S + I +
Sbjct: 240 ERASGGGSGDDARYGGSNPDGSET-LEILVPNDRVGLVIGRGGATIRSIQVRTGTNITVP 298
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQT--MTVPYTYAGVFF 213
+ + R +T+ GT++ + A IL + E+ T M VP GV
Sbjct: 299 QTPDA-TNPTMRKITVKGTMEAKDAAKNEILGLIQENNNTGSTIYMQVPNDRVGVVI 354
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ LV N G VIG+GG+TI Q ++G I + ++ + T R I + GT++
Sbjct: 264 LEILVPNDRVGLVIGRGGATIRSIQVRTGTNITVPQTPDAT-NPTMRKITVKGTME---- 318
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A D +++L + + T + + + VPN G +IGK G TIK D + ++
Sbjct: 319 AKDAAKNEILGLIQENNN-----TGSTIYMQVPNDRVGVVIGKKGETIKGIQDRNTVRVQ 373
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELI---LLKLSEDTLYSQTMTVP 205
I ++ R +++ G + RA E I +L+ + T Y Q T P
Sbjct: 374 IPQVPDVGSNPPVRTISIHGAPESLQRAKEEIDSVILQGAGQTGYDQYATDP 425
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 78/200 (39%), Gaps = 42/200 (21%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ VP + G IIG+ G TI+ S A I+I R + DR V++ GT + A
Sbjct: 171 QMPVPRTYVGYIIGRGGETIRDLQARSGAHIQIVREEEGAAFTPDRFVSIAGTEEAVESA 230
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG 244
+LI L E A G +
Sbjct: 231 KKLIQNLLDE-----------------------------------------RASGGGSGD 249
Query: 245 GRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE 304
++ + D + +L I V ++ +G V+GRGG I I +G I V D + T
Sbjct: 250 DARYGGSNPDGSETLEILVPNDRVGLVIGRGGATIRSIQVRTGTNITVPQTPDATNPTM- 308
Query: 305 RKVTISGPQRSIRTAESMIM 324
RK+T+ G + A++ I+
Sbjct: 309 RKITVKGTMEAKDAAKNEIL 328
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 231 VPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARI 290
V N HYGP D + + + V ++G+++GRGG I ++ SGA I
Sbjct: 151 VDGNEFGHYGPGSA---------DGSQAYQMPVPRTYVGYIIGRGGETIRDLQARSGAHI 201
Query: 291 KVSDRGDFFSGTSERKVTISGPQRSIRTAESMIM 324
++ + + T +R V+I+G + ++ +A+ +I
Sbjct: 202 QIVREEEGAAFTPDRFVSIAGTEEAVESAKKLIQ 235
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 20/191 (10%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
K++ +D + IR ++ G++IGK G + F+ +SGA+I +S +R
Sbjct: 4 KNMINDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPER 58
Query: 84 IIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG------TKTKLRLIVPNSSCGSII 137
I+ ++G+ + I +A L+ K E ++ Q + G LRLIVP S CGS+I
Sbjct: 59 IVTVTGSTNAIFKAFTLICKKF-EEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLI 117
Query: 138 GKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
GK G+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 118 GKGGSKIKEIREVTGASIQVASEMLPNS----TERAVTISGTGEAITQCIYHICTVMLES 173
Query: 196 TLYSQTMTVPY 206
+ T+PY
Sbjct: 174 P--PKGATIPY 182
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 50/201 (24%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
DD +RLI+ GSIIGK G +K F ++S A I IS D S +R+VT+T
Sbjct: 9 DDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINIS--DGS---CPERIVTVT 63
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
G+ + +A LI K E Q + SG G+P PP+
Sbjct: 64 GSTNAIFKAFTLICKKFEEWCSQFQDIN----------SGGSGVPR----PPI------- 102
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
+L + V G ++G+GG I EI +++GA I+V+
Sbjct: 103 ----------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAS- 139
Query: 296 GDFFSGTSERKVTISGPQRSI 316
+ ++ER VTISG +I
Sbjct: 140 -EMLPNSTERAVTISGTGEAI 159
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 247 KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERK 306
+ Q N + +T+ +T V +E IG ++G+GG I EI QISGA I++S+ D SG ++R
Sbjct: 311 RNQQNSNQQTHEMT--VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRT 368
Query: 307 VTISGPQRSIRTAESMIMQKVAYASDRL 334
+TISG ++ A+ +I +++ + L
Sbjct: 369 ITISGNPDAVALAQYLINMRISMETAGL 396
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS D G+ DR +T++G D A
Sbjct: 322 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALA 381
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 382 QYLINMRISMET------------AGLPMPGYH 402
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V N L G +IGKGG+ I + + SGA I++S + G TDR I ISG D + A L
Sbjct: 325 VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQYL 384
Query: 101 V 101
+
Sbjct: 385 I 385
>gi|367050644|ref|XP_003655701.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
gi|347002965|gb|AEO69365.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
Length = 374
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G + I R
Sbjct: 52 LRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSK---VVQGVYDRVLTITGGCEAISR 108
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A V LL + + GT ++L++ ++ G+IIG+ G IK D S
Sbjct: 109 AYAAVARSLLEGAPTMGMGGVIQNNGTH-PIKLLISHNQMGTIIGRQGLKIKHIQDVSGV 167
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT---- 207
+ V + L S +R+V + GT + RA+ I L +D T TV Y
Sbjct: 168 RMVAQKEMLPQS----TERIVEVQGTPEGIQRAVWEICKCLVDD-WQRGTGTVLYNPVVR 222
Query: 208 YAGVFFSGFHG--------MPYGAVPPPVPA----------VPHNTAAHYGPNMGGRKFQ 249
GV G G PYG +N + P+ G
Sbjct: 223 TQGVGAPGISGGSGYVQDRAPYGGSRVTRTGNGADFSNGGPRSYNRRSDSDPSNRGPPTH 282
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
+ + + I + + +G ++GR G I EI + SGARI ++ T ER TI
Sbjct: 283 DENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA--PHDETGERMFTI 340
Query: 310 SGPQRSIRTA 319
G ++ TA
Sbjct: 341 MGTSKANETA 350
>gi|9931474|gb|AAG02184.1|AF257770_1 RNA binding protein MCG10 [Homo sapiens]
gi|9931478|gb|AAG02186.1| RNA binding protein MCG10 [Homo sapiens]
gi|119585569|gb|EAW65165.1| poly(rC) binding protein 4, isoform CRA_a [Homo sapiens]
gi|119585574|gb|EAW65170.1| poly(rC) binding protein 4, isoform CRA_a [Homo sapiens]
Length = 424
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 128/325 (39%), Gaps = 74/325 (22%)
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE--DQADDVGT 120
QS ARI +S +RI I+G+ + AV ++ KL +L A + +
Sbjct: 12 QSSARITISEGS-----CPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRP 66
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDS----------------QAVIKISRLDH-- 162
LRL++P S CGS+IGKAG IK + + V+ + R H
Sbjct: 67 PVTLRLVIPASQCGSLIGKAGTKIKEIREVRGEIYHPQGIRGKGAVVRGVLGLWRPPHLE 126
Query: 163 ------SYYGL-----------------------------NDRLVTLTGTLDEQMRALEL 187
+ GL +R VT++G D + +
Sbjct: 127 SSEPGQPFSGLWEQPEVAPVLCLQTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQ 186
Query: 188 ILLKLSEDTLYSQTMTVPY----TYAGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHY 239
I + E + T+PY + V S G YGAV P ++H
Sbjct: 187 ICAVILESP--PKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHA 244
Query: 240 GPNMGGRKFQN-NKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
P + +T+S V ++ IG V+GR G I EI Q+SGA IK+ ++ +
Sbjct: 245 VPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE- 303
Query: 299 FSGTSERKVTISGPQRSIRTAESMI 323
G ER VTI+G SI A+ +I
Sbjct: 304 --GAGERHVTITGSPVSIALAQYLI 326
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 257 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 313
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 314 GSPVSIALAQYLITACLET 332
>gi|198416446|ref|XP_002119674.1| PREDICTED: similar to rCG61051 [Ciona intestinalis]
Length = 465
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G +IGK G+ I F+S+SGARI +S S + P +RI+ I+G +I +
Sbjct: 12 VRMLMIGKEIGGIIGKAGTNIAKFRSESGARITIS-SEQSVP---ERIVTITGGRGQIHK 67
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT---KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
AV+L+ K+ +++++ + T T +RLIVP S CGSIIGK G IK D +
Sbjct: 68 AVELIAGKMHSDINS--GLSNCATNTVPVTIRLIVPASQCGSIIGKGGVKIKEIRDTTGC 125
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I++ ++R VTL+G + ++++ + + ++T TVP+
Sbjct: 126 AIQVQ--SEMLPNCSERTVTLSGAPSTILHCIDMLCDVMIQ--YPAKTATVPF 174
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRS 315
T LT+G +E +G ++G+GG I EI +SGA+I++ ++ + + +RK+TI G +
Sbjct: 277 TQELTVG--NEFMGCIIGKGGSRIKEIRMLSGAQIQI-NKVEKEDESVDRKITIQGSAEA 333
Query: 316 IRTAESMIMQKV 327
I A +I V
Sbjct: 334 ISLAYYLITLSV 345
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P + +S + E V N G +IGKGGS I + + SGA+IQ+++ E +
Sbjct: 269 PARLISCNTQE------LTVGNEFMGCIIGKGGSRIKEIRMLSGAQIQINKV-EKEDESV 321
Query: 82 DRIIMISGTIDEILRAVDLV 101
DR I I G+ + I A L+
Sbjct: 322 DRKITIQGSAEAISLAYYLI 341
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + SGA+I +S +RI+ I+G +D I +
Sbjct: 25 IRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG-----SCPERIVTITGNVDTINK 79
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++ +K ++ A + T +RLIVP + CGS+IGK G+ IK + + A I+
Sbjct: 80 AFSMICNKFQEDMQALPNSVPKPPIT-MRLIVPATQCGSLIGKGGSKIKEIREATGASIQ 138
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
++ +R VT++G+ D + ++ I L E + T+PY F
Sbjct: 139 VA--SEMLPSSTERAVTISGSADAIVLCMQHICHILLEAP--PKGTTLPYRPKPTF 190
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 86/219 (39%), Gaps = 60/219 (27%)
Query: 111 AEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDR 170
A V +RL++ GSIIGK G IKS D S A I IS D S +R
Sbjct: 12 ASSSVPQVSVILTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINIS--DGS---CPER 66
Query: 171 LVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPA 230
+VT+TG +D +A +I K ED +P PP+
Sbjct: 67 IVTITGNVDTINKAFSMICNKFQED--------------------MQALPNSVPKPPI-- 104
Query: 231 VPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARI 290
++ + V G ++G+GG I EI + +GA I
Sbjct: 105 ---------------------------TMRLIVPATQCGSLIGKGGSKIKEIREATGASI 137
Query: 291 KVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAY 329
+V+ + ++ER VTISG +I + MQ + +
Sbjct: 138 QVAS--EMLPSSTERAVTISGSADAI----VLCMQHICH 170
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
+++L + + P +R +V G++IGKGGS I + + +GA IQ+ + E P +T+
Sbjct: 92 MQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV--ASEMLPSSTE 149
Query: 83 RIIMISGTIDEILRAVDLVIDKLL 106
R + ISG+ D I+ + + LL
Sbjct: 150 RAVTISGSADAIVLCMQHICHILL 173
>gi|336273542|ref|XP_003351525.1| hypothetical protein SMAC_00067 [Sordaria macrospora k-hell]
gi|380095805|emb|CCC05851.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 372
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 135/329 (41%), Gaps = 50/329 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + + + ++G + +S+ G DR++ I+G D + +
Sbjct: 52 LRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSK---VVQGVHDRVLTITGGCDAVSK 108
Query: 97 AVDLVIDKLLTELHAEDQADDVGT--------KTKLRLIVPNSSCGSIIGKAGATIKSFM 148
A V LL + A VG L+L++ ++ G++IG+ G IK
Sbjct: 109 AYAAVARSLL------EGAPSVGMGGVISANGTHPLKLLISHNQMGTVIGRQGLKIKHIQ 162
Query: 149 DDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYS 199
D S + V + L S +R+V + GT + RA+ I L +D LY+
Sbjct: 163 DVSGVRMVAQKEMLPQS----TERVVEVQGTPEGIERAVWEICKCLVDDWQRGTGTVLYN 218
Query: 200 QTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD------ 253
+ P G P A + N GGR + D
Sbjct: 219 PVVRGP---GAPVSGGERNYPQERSYGSSRVTRTGNGADFSSNSGGRAYNRRSDSDAASR 275
Query: 254 ---------DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE 304
+ + I + + +G ++GR G I EI + SGARI ++ SG E
Sbjct: 276 GPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKQSGARISIAKGPHDESG--E 333
Query: 305 RKVTISGPQRSIRTAESMIMQKVAYASDR 333
R TI G ++ TA ++ + + R
Sbjct: 334 RMFTIMGSAKANETALYLLYENLEAEKTR 362
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G + I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISDGS-----SPERIVTITGASEVIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ +K ++ A V ++ LRL+ P S CGS+IGK G+ IK + + A
Sbjct: 74 AFAMIAEKFEEDILASMINSTVTSRPPVTLRLVFPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L S +R VT++GT + ++ I + E + T+PY
Sbjct: 134 VQVAGDLLPDS----TERAVTISGTPHAITQCVKHICTVMLESP--PKGATIPY 181
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 53/193 (27%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G T+K ++S A I IS D S +R+VT+TG + +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINIS--DGSS---PERIVTITGASEVIFK 73
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +I K ED L S + + PPV
Sbjct: 74 AFAMIAEKFEEDILASMINSTVTSR-----------------PPV--------------- 101
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+L + G ++G+GG I EI + +GA+++V+ GD ++
Sbjct: 102 --------------TLRLVFPASQCGSLIGKGGSKIKEIRESTGAQVQVA--GDLLPDST 145
Query: 304 ERKVTISGPQRSI 316
ER VTISG +I
Sbjct: 146 ERAVTISGTPHAI 158
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R + G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 100 PVTLRLVFPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDLLPDSTERAVTISGTPHA 157
Query: 94 ILRAVDLVIDKLL 106
I + V + +L
Sbjct: 158 ITQCVKHICTVML 170
>gi|443720285|gb|ELU10083.1| hypothetical protein CAPTEDRAFT_219465 [Capitella teleta]
Length = 708
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 59/290 (20%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT---IDEIL 95
+ V + + G +IGKGG I + QS++G ++Q + P DR + GT I E
Sbjct: 148 YSVPDRMVGLIIGKGGEQIANIQSETGCKVQFAPDSAGMP---DRPCQLMGTPQAIAEAK 204
Query: 96 RAVDLVIDKLLTELHAEDQADDV-GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+ ++ +I K + D+ G +T L + +P + G +IGK G TIK + QA
Sbjct: 205 KTIERIIQK------GQGLPDNFGGDQTMLEVFIPGNKVGLVIGKGGETIKHLQE--QAG 256
Query: 155 IKISRLDHSYYGLN-DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
+K+ + S N D+ + +TG++ +A EL++ ++E +
Sbjct: 257 VKMVMIQDSNLPSNQDKPLRITGSIQACQKAKELVMDLIAEKDMGGGGGGGGGYGGDYGG 316
Query: 214 SGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVG 273
G + M I V +G V+G
Sbjct: 317 GGRNAM----------------------------------------EIPVPRSMVGVVIG 336
Query: 274 RGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
RGG I +I +GA+++ + D G + R TI+GPQ ++ A MI
Sbjct: 337 RGGEMIKKIQAETGAKVQF--KTDDGQGPN-RMCTINGPQDKVQNASCMI 383
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + G VIGKGG TI Q Q+G ++ + + P D+ + I+G+I
Sbjct: 226 TMLEVFIPGNKVGLVIGKGGETIKHLQEQAGVKMVMIQDSN-LPSNQDKPLRITGSIQAC 284
Query: 95 LRAVDLVIDKLLTE---------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+A +LV+D L+ E G + + + VP S G +IG+ G IK
Sbjct: 285 QKAKELVMD-LIAEKDMGGGGGGGGGYGGDYGGGGRNAMEIPVPRSMVGVVIGRGGEMIK 343
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
++ A ++ D G N R+ T+ G D+ A +I
Sbjct: 344 KIQAETGAKVQFKTDDGQ--GPN-RMCTINGPQDKVQNASCMI 383
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
F V G VIGKGG TI + QSGA ++L R H+ + DR+ I G D+I A+
Sbjct: 442 FAVPAEKCGLVIGKGGETIREINRQSGAHVELDR-HQSQSNSRDRVFKIQGNADQIQSAI 500
Query: 99 DLVIDK 104
L+ DK
Sbjct: 501 RLISDK 506
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 72/191 (37%), Gaps = 38/191 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V + G VIG+GG I Q+++GA++Q P +R+ I+G D++
Sbjct: 322 MEIPVPRSMVGVVIGRGGEMIKKIQAETGAKVQFKTDDGQGP---NRMCTINGPQDKVQN 378
Query: 97 AVDLVIDKLLTELH----------------------------------AEDQADDVGTKT 122
A ++ + + T ++ +
Sbjct: 379 ASCMIRELIDTAMNDRGRGRGGGGRGGGMDFNGGSGGNGRDYGNGGGGGGSYGGGGSGQD 438
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
+ VP CG +IGK G TI+ S A +++ R S DR+ + G D+
Sbjct: 439 ETMFAVPAEKCGLVIGKGGETIREINRQSGAHVELDR-HQSQSNSRDRVFKIQGNADQIQ 497
Query: 183 RALELILLKLS 193
A+ LI K S
Sbjct: 498 SAIRLISDKAS 508
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
V E G V+G+GG I EI++ SGA +++ DR S + +R I G I++A +
Sbjct: 444 VPAEKCGLVIGKGGETIREINRQSGAHVEL-DRHQSQSNSRDRVFKIQGNADQIQSAIRL 502
Query: 323 IMQKVA 328
I K +
Sbjct: 503 ISDKAS 508
>gi|346322193|gb|EGX91792.1| KH domain RNA binding protein [Cordyceps militaris CM01]
Length = 464
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG +D
Sbjct: 108 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGIVDAAA 164
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E E +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 165 KAFGLIIRTLNNEPLTE--TSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 222
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 223 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNERFGGPAASAYA 275
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P + YG
Sbjct: 276 TRSGTPAGSIPGGMQVVPYSPQPASGQYG 304
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDP-TEKPTY------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P TE T +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 171 IRTLNNEPLTETSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 228
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +++R +++ G D + A V LL +L+
Sbjct: 229 CLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLN 263
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 83/233 (35%), Gaps = 67/233 (28%)
Query: 92 DEILRAVDLVIDKLLTELHAEDQ-------------ADDVGTKTKLRLIVPNSSCGSIIG 138
DE+ V D + E A+++ A D + +R ++ + +IIG
Sbjct: 64 DEVSNGVKTEADAVAVEASADEKVAAAAATNSSSAAAHDETSWIHIRAVISSPEAATIIG 123
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
K G + + S A +S G +R++T++G +D +A LI+ L+ + L
Sbjct: 124 KGGENVSNIRKMSNAKCTVSDYQK---GAVERILTVSGIVDAAAKAFGLIIRTLNNEPLT 180
Query: 199 SQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNS 258
+ TY +PH
Sbjct: 181 ETSTASSKTYPLRLL-----------------IPHIL----------------------- 200
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
IG ++G+GG I EI + SGAR+ SD +SER + + G
Sbjct: 201 ---------IGSIIGKGGARIREIQEASGARLNASD--SCLPMSSERSLVVMG 242
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 387 GAPMTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQDNS----NERLVTVTGT 442
Query: 178 LDEQMRALELILLKLSED 195
+ AL L+ +L +
Sbjct: 443 EECNRMALYLLYARLDSE 460
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I + ++ +G ++G+GG+ I EI Q+SG+ IK+++ D ++ER VT++G + R A
Sbjct: 394 IYIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQD---NSNERLVTVTGTEECNRMAL 450
Query: 321 SMIMQKVAYASDRL 334
++ ++ R+
Sbjct: 451 YLLYARLDSEKHRM 464
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ ++GT +
Sbjct: 389 PMTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQD---NSNERLVTVTGTEEC 445
Query: 94 ILRAVDLVIDKLLTELH 110
A+ L+ +L +E H
Sbjct: 446 NRMALYLLYARLDSEKH 462
>gi|297741005|emb|CBI31317.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 9 VPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARI 68
VPS +V ++ T+ +++S + V N G +IGK G TI Q SGA+I
Sbjct: 160 VPSAEVQ-QQPTSETQTMSR---------KMEVPNNKVGVLIGKAGDTIRFLQYNSGAKI 209
Query: 69 QLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVID-----------KLLTELHAEDQADD 117
Q++R + P + R + + G+++ I +A L+ D L+ A QA
Sbjct: 210 QITRDADADPYSASRPVELIGSLENINKAEKLIKDVIAEADAGGSPSLVARGFATAQA-- 267
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK-----ISRLDHSYYGLNDRLV 172
VG ++++ VPN G IIGK G TIKS S A I+ + D S +R V
Sbjct: 268 VGAAEQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQHLPEGDQS----KERTV 323
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
+TG + A E+I + +Q +P+T+A F G
Sbjct: 324 RVTGDKKQIEMAREMI------KEVMNQIWLLPFTWAQHCFLGV 361
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 48/206 (23%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ VPN+ G +IGKAG TI+ +S A I+I+R D Y + R V L G+L+ +
Sbjct: 179 KMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSAS-RPVELIGSLENINK 237
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +LI ++E V +A TA G
Sbjct: 238 AEKLIKDVIAEADAGGSPSLVARGFA-------------------------TAQAVG--- 269
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR----GDFF 299
+ I V +E +G ++G+GG I + SGARI++ + GD
Sbjct: 270 -----------AAEQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQHLPEGD-- 316
Query: 300 SGTSERKVTISGPQRSIRTAESMIMQ 325
+ ER V ++G ++ I A MI +
Sbjct: 317 -QSKERTVRVTGDKKQIEMAREMIKE 341
>gi|426343191|ref|XP_004038198.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Gorilla gorilla gorilla]
Length = 376
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I ++ GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 16 ISYIPDEEFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 74 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 129
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 130 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 186
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 187 YPHHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 223
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 224 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 273
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 97 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 156
Query: 97 AVDLVIDKL-----------------LTELHAEDQ------ADDVGTKTKLRLIVPNSSC 133
A ++ KL + L+ Q + + L +P +
Sbjct: 157 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 216
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 217 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 274
Query: 194 EDTLYS 199
E+ ++
Sbjct: 275 EENFFN 280
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 207 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 264
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 265 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 321
Query: 157 ISR 159
+ R
Sbjct: 322 VPR 324
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 62/217 (28%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD--- 179
K+ I G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T +
Sbjct: 15 KISYIPDEEFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTS 72
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
E R + I+ K +++T ++ + P+ + HN
Sbjct: 73 EACRMILEIMQKEADETKLAEEI------------------------PLKILAHNGL--- 105
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 106 ----------------------------VGRLIGKEGRNLKKIEHETGTKITISSLQDLS 137
Query: 300 SGTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 138 IYNPERTITVKGTVEACASAEIEIMKKLREAFENDML 174
>gi|358055492|dbj|GAA98612.1| hypothetical protein E5Q_05299 [Mixia osmundae IAM 14324]
Length = 549
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 16/148 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGKGG +I + + ++G ++ +S S P +RI+ +SG +D + +
Sbjct: 190 LRALIVTQDASIIIGKGGQSIKEIREKAGVKVLVSES---IPNNPERILNVSGLLDGVSK 246
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----KTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
A L++ ++ D+ DV + +R IVPN GSIIGK GA IK D S
Sbjct: 247 AFGLIVRRI------NDEPFDVPSVPGSRAVTIRFIVPNHRMGSIIGKQGAKIKEIQDAS 300
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLD 179
A ++ + G +R+++++G D
Sbjct: 301 GA--RLQATESMLPGSTERILSISGVAD 326
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P + IRF+V N G++IGK G+ I + Q SGAR+Q + S PG+T+RI+
Sbjct: 262 VPSVPGSRAVTIRFIVPNHRMGSIIGKQGAKIKEIQDASGARLQATES--MLPGSTERIL 319
Query: 86 MISGTIDEILRAV 98
ISG D I AV
Sbjct: 320 SISGVADAIHIAV 332
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR ++ IIGK G +IK + + + +S S +R++ ++G LD +
Sbjct: 190 LRALIVTQDASIIIGKGGQSIKEIREKAGVKVLVSE---SIPNNPERILNVSGLLDGVSK 246
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI+ +++++ P+ VP+VP
Sbjct: 247 AFGLIVRRINDE---------PFD--------------------VPSVP----------- 266
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
R ++ V + +G ++G+ G I EI SGAR++ ++ G++
Sbjct: 267 ---------GSRAVTIRFIVPNHRMGSIIGKQGAKIKEIQDASGARLQATE--SMLPGST 315
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
ER ++ISG +I A +A SDR ++
Sbjct: 316 ERILSISGVADAIHIAVYYTGAILAEHSDRAVN 348
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN---DRLVTL 174
VG ++ +PN G IIGK G I ++S A IKI ++ S GLN +RLV +
Sbjct: 459 VGPNQTQQVYIPNELVGPIIGKGGLKINELRNNSGAHIKI--MEPSEGGLNPNGERLVNV 516
Query: 175 TGTLDEQMRALELILLKLSED 195
+G A++++ +L ++
Sbjct: 517 SGQPANIQMAVQMLYQRLEQE 537
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE--FFPGTTDRIIMISGTIDEIL 95
+ + N L G +IGKGG IN+ ++ SGA I++ E P +R++ +SG I
Sbjct: 466 QVYIPNELVGPIIGKGGLKINELRNNSGAHIKIMEPSEGGLNP-NGERLVNVSGQPANIQ 524
Query: 96 RAVDLVIDKLLTE 108
AV ++ +L E
Sbjct: 525 MAVQMLYQRLEQE 537
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 219 MPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRN 278
MP+G PPPV P GPN + + + +E +G ++G+GG
Sbjct: 447 MPFG--PPPVATGP------VGPNQTQQVY--------------IPNELVGPIIGKGGLK 484
Query: 279 IMEISQISGARIKVSDRGD-FFSGTSERKVTISGPQRSIRTAESMIMQKV 327
I E+ SGA IK+ + + + ER V +SG +I+ A M+ Q++
Sbjct: 485 INELRNNSGAHIKIMEPSEGGLNPNGERLVNVSGQPANIQMAVQMLYQRL 534
>gi|145238284|ref|XP_001391789.1| RNA-binding protein rnc1 [Aspergillus niger CBS 513.88]
gi|134076273|emb|CAL00757.1| unnamed protein product [Aspergillus niger]
gi|350635790|gb|EHA24151.1| hypothetical protein ASPNIDRAFT_209528 [Aspergillus niger ATCC
1015]
Length = 360
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 142/321 (44%), Gaps = 35/321 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ PG DR++ ++G ++ R
Sbjct: 45 LRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSK---VVPGVHDRVLTVTGPLNGTAR 101
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A LV LL ++ + GT +RL++ ++ G+IIG+ G IK D S
Sbjct: 102 AYALVAKGLLEGAPQMGMGGIVSNNGTH-PVRLLISHNQMGTIIGRQGLKIKHIQDASGV 160
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV---PYTY 208
+ V + L S +R+V + GT + +A+ I L +D T T+ P
Sbjct: 161 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAVWEIGKCLIDD-WQRGTGTILYNPAVR 215
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHN---TAAHYGPNMGGRKFQNNKD------------ 253
A V + +V + P+N A + GG ++N D
Sbjct: 216 ASVGTTTSTSTMNQSVGNGYNSRPYNRTGNGADFSDQSGGYGRRSNPDTSNRGYPLVTED 275
Query: 254 -DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+ + I + + +G ++GRGG I EI + SGARI ++ T ER TI G
Sbjct: 276 GEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA--PHDETGERMFTIMGS 333
Query: 313 QRSIRTAESMIMQKVAYASDR 333
++ A ++ + + R
Sbjct: 334 AQANEKALYLLYENLEAEKTR 354
>gi|26353480|dbj|BAC40370.1| unnamed protein product [Mus musculus]
Length = 579
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 16/310 (5%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQASPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRES-- 350
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN 257
Y + A G + G PP P + +F+ ++ T
Sbjct: 351 YENDIASMNLQAN-LIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQSE---TE 406
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
++ + + +G ++G+ G++I ++S+ +GA IK++ R V I+GP +
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQF 464
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 465 KAQGRIYGKI 474
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQSLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|119195161|ref|XP_001248184.1| hypothetical protein CIMG_01955 [Coccidioides immitis RS]
gi|303310665|ref|XP_003065344.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105006|gb|EER23199.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|392862573|gb|EAS36772.2| KH domain RNA-binding protein [Coccidioides immitis RS]
Length = 366
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 35/299 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS AG +IGK G + D + ++G + +S+ G DR++ ++G + +
Sbjct: 50 LRAIVSTKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVQGVHDRVLTVTGPLQGTAK 106
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A +V LL ++ + GT +RL++ ++ G+IIG+ G IK D S
Sbjct: 107 AYGMVAKSLLEGAPQMGMGGIIQNNGTH-PVRLLISHNQMGTIIGRNGLKIKCIQDASGV 165
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV---PYTY 208
+ V + L S +R+V + GT + +A+ I L +D T TV P
Sbjct: 166 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAVWEIGKCLIDD-WQRGTGTVLYNPAVR 220
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHN---TAAHYGPNMGGRKFQNNKD------------ 253
A V + + G P P+N A + + G ++N D
Sbjct: 221 ANVGGASMNSAFVGPNPNTYSGRPYNRTGNGADFSDHPGTYNRRHNSDAPNRGIPLVTED 280
Query: 254 -DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
+ + I + + +G ++GRGG I EI + SGARI ++ +G ER TI G
Sbjct: 281 GEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKAAHDETG--ERMFTIMG 337
>gi|291394537|ref|XP_002713869.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Oryctolagus cuniculus]
Length = 517
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 134/324 (41%), Gaps = 44/324 (13%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P + P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 119 RQGSPGSASKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN-- 174
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 175 AGAAEKSITILSTPE----GTSAACKSILEIMHKEAQDTKFTEEIPLKILAHNNFVGRLI 230
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-- 195
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 231 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYE 290
Query: 196 ----TLYSQTMTVP---YTYAGVF-----FSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
++ Q +P G+F P A+ PP P +
Sbjct: 291 NDIASMNLQAHLIPGLNLNALGLFPPTPGMPPPTPGPPSAMAPPYPPL------------ 338
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
+ T ++ + + +G ++G+ G++I ++S+ +GA IK++
Sbjct: 339 --------EQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAK 388
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
R V I+GP + A+ I K+
Sbjct: 389 VRMVIITGPPEAQFKAQGRIYGKI 412
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 356 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 413
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 414 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 469
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 470 NDQVVVKITG 479
>gi|346324545|gb|EGX94142.1| KH domain RNA-binding protein [Cordyceps militaris CM01]
Length = 420
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 135/321 (42%), Gaps = 56/321 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G D I R
Sbjct: 49 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGGCDAISR 105
Query: 97 AVDLVIDKLLTELHAEDQADDV-GTKTK-LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL A V G T ++L++ ++ G++IG+ G IK D S +
Sbjct: 106 AYAIVARALLEGAPAMGMGGVVQGNGTHPIKLLISHNQMGTVIGRQGLKIKHIQDVSGVR 165
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY-----T 207
V + L S +R+V + GT + RAL I L +D T TV Y T
Sbjct: 166 MVAQKEMLPQS----TERIVEVQGTPEGIQRALWEICKCLVDD-WQRGTGTVLYNPVVRT 220
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG-------------PNMGG-RKFQNNKD 253
AG S + A NT A Y N GG R F D
Sbjct: 221 QAGTTGSTGSTGSFAATG--------NTRAEYSTPRVMRTGNGSDFSNGGGSRPFSRRSD 272
Query: 254 ---------------DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
+ + I + + +G ++GR G I EI + SGARI ++
Sbjct: 273 SDAASRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA--P 330
Query: 299 FSGTSERKVTISGPQRSIRTA 319
T ER TI G ++ +A
Sbjct: 331 HDETGERMFTIMGTAKANESA 351
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T R++ G+VIG+GG + + ++ A+I++ E PG +R++ I G DE
Sbjct: 42 TVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIG---ETVPGCEERVVTIYGPSDET 98
Query: 95 -------------LRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
A+ V D+++ E DQ DD G + +L+VP+ G +IGK G
Sbjct: 99 NAVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGG 158
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYGL--NDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ +++ ++ A I+I + DH +D LV +TG +AL I +L ++ S
Sbjct: 159 SIVQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPSRS 218
Query: 200 QTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGG------RKFQNNKD 253
Q + + +GV+ +G + GA P V P YG G R +
Sbjct: 219 QHL-LTSAVSGVYPAGGSLIGPGAGAPIVGIAP--LVGSYGGYKGDTGDWPPRSMYSAPR 275
Query: 254 DRTNSLTIGV----ADEHIGFVVGRGGRNIMEISQISGARIKV 292
D +S V +IG V+G+GG I +I Q SGA IKV
Sbjct: 276 DEASSKEFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKV 318
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 35/197 (17%)
Query: 16 GKRSTAPVKSLSSDP----TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
G P +S+ S P + K +R + G VIGKGG IN + SGA I++
Sbjct: 260 GDTGDWPPRSMYSAPRDEASSKEFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVD 319
Query: 72 RS-------------HEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV 118
S EFF T S TI+ +R L +E D
Sbjct: 320 SSTIEGDECLIAISTKEFFEET------FSPTIEAAVR---------LQPRCSEKVERDS 364
Query: 119 GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLT 175
G + RL+VP + G +IGK G+ I ++A I+I ++ +D +V ++
Sbjct: 365 GIISFTTRLLVPTTRIGCLIGKGGSIITDMRRLTKANIRIISKENLPKIANEDDEMVQIS 424
Query: 176 GTLDEQMRALELILLKL 192
G LD AL +L +L
Sbjct: 425 GDLDVAKDALVHVLTRL 441
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Query: 232 PHNTAAH-YGPNMGGRKFQNNKDDRTNSLTIGVAD---------EHIGFVVGRGGRNIME 281
PH+ + H GPN K +N+ DDR I D IG V+GRGG + +
Sbjct: 12 PHSQSDHDNGPN----KRRNHGDDR-EQFVIDSEDTVYRYVCPGRKIGSVIGRGGEIVKQ 66
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
+ + A+I++ G+ G ER VTI GP E
Sbjct: 67 LRVETKAKIRI---GETVPGCEERVVTIYGPSDETNAVE 102
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 140/358 (39%), Gaps = 91/358 (25%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
R LV GA+IG+ G I ++ ARI++ + PG +R +MIS DE
Sbjct: 233 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKIL---DGPPGVPERAVMISAK-DEPDA 288
Query: 97 AVDLVIDKLLTELHAE--DQAD--------DVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ +D LL +H D +D G RL+VP+S GS+IGK GATIKS
Sbjct: 289 PLSPAMDGLL-RVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKS 347
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI-------LLKLSEDTLYS 199
D S+++++I +DR+V + G A+ELI L+ S L+
Sbjct: 348 IQDSSKSIVRIVENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDRSVLPLFE 407
Query: 200 QTMTVPYTYAGVFFSGFHGMPY-GAVPP-------------------------------- 226
M + HGMP VPP
Sbjct: 408 AHMKM------------HGMPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFMHP 455
Query: 227 -------PVPAVPH-NTAAHYGPNMGGRKFQNNKDDRTNSLTIGVA------DEHIGF-- 270
P P VPH HYG + GR+ + T + A D HI
Sbjct: 456 RPQDSYYPSPDVPHMEKQPHYGISAYGREAPPSGASATGNQPPSHAGSQVAHDMHIPLAY 515
Query: 271 ---VVGRGGRNIMEISQISGARIKVSD-RGDFFSGTSERKVTISGPQRSIRTAESMIM 324
V+G G +I I + SGA + + + RG E V I+G ++TA+ +I
Sbjct: 516 ADAVIGAAGASISYIRRHSGATVTIQESRG----APGEMTVEITGTAAQVQTAQQLIQ 569
>gi|225543383|ref|NP_076159.3| insulin-like growth factor 2 mRNA-binding protein 3 [Mus musculus]
gi|81916748|sp|Q9CPN8.1|IF2B3_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3;
Short=mIMP-3; AltName: Full=IGF-II mRNA-binding protein
3; AltName: Full=VICKZ family member 3
gi|11933384|dbj|BAB19755.1| igf2 mRNA-binding protein 3 [Mus musculus]
gi|12847973|dbj|BAB27779.1| unnamed protein product [Mus musculus]
gi|28175449|gb|AAH45138.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|29145081|gb|AAH49082.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|148666183|gb|EDK98599.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Mus musculus]
Length = 579
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 16/310 (5%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQASPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRES-- 350
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN 257
Y + G + G PP P + +F+ ++ T
Sbjct: 351 YENDIAS-MNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQSE---TE 406
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
++ + + +G ++G+ G++I ++S+ +GA IK++ R V I+GP +
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQF 464
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 465 KAQGRIYGKI 474
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQSLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|74151175|dbj|BAE27710.1| unnamed protein product [Mus musculus]
Length = 579
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 16/310 (5%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQASPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRES-- 350
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN 257
Y + G + G PP P + +F+ ++ T
Sbjct: 351 YENDIA-SMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQSE---TE 406
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
++ + + +G ++G+ G++I ++S+ +GA IK++ R V I+GP +
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQF 464
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 465 KAQGRIYGKI 474
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQSLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|281354032|gb|EFB29616.1| hypothetical protein PANDA_003725 [Ailuropoda melanoleuca]
Length = 434
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 61 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 118
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 119 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 174
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 175 ISSLQDLSIYN-PERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNQQANLIPGLNL 233
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP--HNTAAH-------YGPNMGGRKFQNNKDDRTN 257
+ G+F +G +P A P P P H A H Y P+ G ++
Sbjct: 234 SALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 293
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 294 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 351
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 352 KAQGRIFGKL 361
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 61 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 118
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 119 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 149
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 150 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 183
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 184 YNPERTITVKGTVEACANAEVEIMKKLREAFENDML 219
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 295 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 352
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 353 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 409
Query: 157 ISR 159
+ R
Sbjct: 410 VPR 412
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 295 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 352
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 353 AQGRIFGKLKEENFFN 368
>gi|224142865|ref|XP_002324756.1| predicted protein [Populus trichocarpa]
gi|222866190|gb|EEF03321.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 18/163 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G +IGKGG TI Q QSGA+IQ++R + P + RI+ + GT ++I +A L+ D L
Sbjct: 149 GVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGTPEQIAKAEQLINDVL- 207
Query: 107 TELHAEDQADDVGTKTK----------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
AE A GT ++ + +PN+ G +IGK G +IK+ S A I+
Sbjct: 208 ----AEADAGGSGTISRRYAGQGGSEHFSMKIPNNKVGLVIGKGGDSIKNMQARSGARIQ 263
Query: 157 ISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
+ L H G +R V + GT ++ A +L+ SE+ L
Sbjct: 264 VIPL-HLPPGDTSTERTVHIEGTSEQVEAAKQLVNEVTSEELL 305
>gi|443712210|gb|ELU05631.1| hypothetical protein CAPTEDRAFT_229004 [Capitella teleta]
Length = 679
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 133/315 (42%), Gaps = 27/315 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ LV + GA+IGKGG TI + +R+ + G +++I I G +
Sbjct: 194 LKILVPSDFVGAIIGKGGETIRTITKKCNSRVDVHGKEN--SGLLEKVISIYGNPENCTS 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++ + EL + ++ + L+++ N CG +IG+ G IK +D+Q I
Sbjct: 252 ACKEILLVMQNELSSPNRTSSSVQEIVLKILADNRYCGRVIGREGRVIKKIREDTQTKIT 311
Query: 157 IS-------RLDHSYYGLND-------RLVTLTGTLD---EQMRALELILLKLSEDTLYS 199
+S L H +GL D R++++ G +D E A+ IL + +E ++
Sbjct: 312 VSNDSDHLLELGHG-HGLQDVASMFPERVISVRGDIDHMSEAEGAISTILRECAEKDMHQ 370
Query: 200 -----QTMTVPYTYAGV-FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD 253
+ M +P G+ G P G G + +
Sbjct: 371 PQLDPRMMAMPGAMGGLPMMQGAGAGGIYPGGGPGFYPGMYPGVQQGHQDMGFPPSSGSN 430
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS-DRGDFFSGTSERKVTISGP 312
T + I V + +G ++G G NI +I + S A + + + D + SER V+I G
Sbjct: 431 SPTETCQICVPNSAVGALIGAAGSNIKQIIRDSQAFVTIEPKKDDDPNPASERIVSIKGT 490
Query: 313 QRSIRTAESMIMQKV 327
Q SI A + +K+
Sbjct: 491 QDSIWRASYYVFEKL 505
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG-T 80
P S S+ PTE + V N GA+IG GS I S A + + + P
Sbjct: 424 PPSSGSNSPTET---CQICVPNSAVGALIGAAGSNIKQIIRDSQAFVTIEPKKDDDPNPA 480
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++RI+ I GT D I RA V +KL +E + + DDV +T +R VP + G +IGK
Sbjct: 481 SERIVSIKGTQDSIWRASYYVFEKLKSEGFSGN--DDVRLRTAIR--VPQKAVGFVIGKG 536
Query: 141 GATIKSFMDDSQAVIKI 157
G ++ + A+IK+
Sbjct: 537 GKNVREVQRMTGAIIKL 553
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 53/172 (30%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS-RLDHSYYGLNDRLVTLTGTLDEQM 182
++ VPNS+ G++IG AG+ IK + DSQA + I + D ++R+V++ GT D
Sbjct: 436 CQICVPNSAVGALIGAAGSNIKQIIRDSQAFVTIEPKKDDDPNPASERIVSIKGTQDSIW 495
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
RA + KL + GF G
Sbjct: 496 RASYYVFEKLKSE-------------------GFSG------------------------ 512
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD 294
DD I V + +GFV+G+GG+N+ E+ +++GA IK+ +
Sbjct: 513 ---------NDDVRLRTAIRVPQKAVGFVIGKGGKNVREVQRMTGAIIKLPE 555
>gi|268574250|ref|XP_002642102.1| Hypothetical protein CBG18043 [Caenorhabditis briggsae]
Length = 839
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 121/291 (41%), Gaps = 40/291 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGAR---IQLSRSHEFFPGTTDRIIMISGTIDE 93
IR +V ++G+ G+TI D R I LS+ G +DRI+ I G ++
Sbjct: 306 IRCVVEGKYQQVIMGEHGATIRDIAQSCHCRVDFIHLSKKERMVLGNSDRILTIHGYAEQ 365
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++D + TE +D VG LRL N CG +IGK G +IK M +
Sbjct: 366 ASKAVARILDVIQTEAIKDDAM--VGADVVLRLRAHNQLCGRLIGKGGTSIKDIMQKTGT 423
Query: 154 VIKISR-----------LDHSYYGLNDRLVTLTG-TLDEQMRALELILLKL-----SEDT 196
I +S+ GL++R + + G +++ ++A LI KL S+
Sbjct: 424 NITVSKHVDPPGGYQSLRQDEMLGLSERTIVIRGPSIEAVVQAESLISAKLKKCYESDSH 483
Query: 197 LYSQTMTVPYTYAGVFFSGFHGMPYGA---VPPPVPAVPHNTAAHYGPNMGGRKFQNNKD 253
+ +Q M + GM GA P P V H+ + QNN
Sbjct: 484 MRNQGMPMAPMMMPPIPPQVAGMIPGAPQLFPTPAGVV---QIQHFPRPPHQQLTQNNAF 540
Query: 254 DRTNSLTIG------------VADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ L I V D IG ++G G+NI I + +GA +K+
Sbjct: 541 LASGVLQIAPGVTNLRHVRMWVPDNMIGALIGAKGKNIKMIIRDTGAAVKI 591
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSD-----------RGDFFSGTSERKV 307
L + ++ G ++G+GG +I +I Q +G I VS R D G SER +
Sbjct: 394 LRLRAHNQLCGRLIGKGGTSIKDIMQKTGTNITVSKHVDPPGGYQSLRQDEMLGLSERTI 453
Query: 308 TISGPQ-RSIRTAESMIMQKV--AYASDRLM 335
I GP ++ AES+I K+ Y SD M
Sbjct: 454 VIRGPSIEAVVQAESLISAKLKKCYESDSHM 484
>gi|121710626|ref|XP_001272929.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
gi|119401079|gb|EAW11503.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
Length = 362
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 140/321 (43%), Gaps = 35/321 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ PG DR++ ++G + R
Sbjct: 46 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVPGVHDRVLTVTGPLQGTAR 102
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A LV LL ++ ++ GT +RL++ ++ G+IIG+ G IK D S
Sbjct: 103 AYALVAKGLLEGAPQMGMGGIVNNNGTH-PVRLLISHNQMGTIIGRQGLKIKHIQDASGV 161
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA-- 209
+ V + L S +R+V + GT + +A+ I L +D T T+ Y A
Sbjct: 162 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAVWEIGKCLIDD-WQRGTGTILYNPAVR 216
Query: 210 ------------GVFFSGFHGMPYGAVPPPVPAVPHNTAAHY---GPNMGGRKFQNNKDD 254
+G++ PY +A + P+ R + +D
Sbjct: 217 ASVGTGSSINTNTTASNGYNSRPYNRTGNGADFSDGQSAGYSRRSNPDTSNRGYPLVTED 276
Query: 255 --RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
+ I + + +G ++GRGG I EI + SGARI ++ T ER TI G
Sbjct: 277 GEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA--PHDETGERMFTIMGS 334
Query: 313 QRSIRTAESMIMQKVAYASDR 333
++ A ++ + + R
Sbjct: 335 AQANEKALYLLYENLEAEKTR 355
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 93/236 (39%), Gaps = 62/236 (26%)
Query: 95 LRAVDLVIDKLLTE-LHAEDQAD-DVGTKTK---------LRLIVPNSSCGSIIGKAGAT 143
+R V+D +T+ ++ D+ D D+ KT+ LR IV + G IIGKAG
Sbjct: 6 MRDAPPVVDDAMTDAMNVVDEGDMDITPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKN 65
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+ D++ +S++ G++DR++T+TG L RA L+ L E
Sbjct: 66 VADLRDETGVKAGVSKV---VPGVHDRVLTVTGPLQGTARAYALVAKGLLE--------- 113
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
GA P MG NN + T+ + + +
Sbjct: 114 ------------------GA-----------------PQMGMGGIVNN--NGTHPVRLLI 136
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTA 319
+ +G ++GR G I I SG R+ + ++ER V + G I A
Sbjct: 137 SHNQMGTIIGRQGLKIKHIQDASGVRMVAQK--EMLPQSTERIVEVQGTPEGIEKA 190
>gi|358398587|gb|EHK47938.1| hypothetical protein TRIATDRAFT_47313 [Trichoderma atroviride IMI
206040]
Length = 369
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 133/309 (43%), Gaps = 35/309 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G D I R
Sbjct: 48 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGGCDAISR 104
Query: 97 AVDLVIDKLLTELHAEDQADDV-GTKTK-LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL A V G T ++L++ ++ G+IIG+ G IK D S +
Sbjct: 105 AYAIVARALLEGAPAVGMGGIVQGNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDTSGVR 164
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVP 205
V + L S +R+V + GT + RA+ I L +D LY+ +
Sbjct: 165 MVAQKEMLPQS----TERVVEVQGTPEGIQRAIWEISKCLVDDWQRGTGTVLYNPVVRTQ 220
Query: 206 YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD------------ 253
+ +G +G G P V N G R F D
Sbjct: 221 TSGSGSMSGTGYGNGGGRGDYGSPRVMRTGNGADFSNGGSRPFSRRSDSDAATRGPPTHD 280
Query: 254 ---DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
+ + I + + +G ++GRGG I +I + SGARI ++ T ER TI
Sbjct: 281 ENGEEIQTQNISIPADMVGCIIGRGGSKISDIRKTSGARISIAKA--PHDETGERMFTIM 338
Query: 311 GPQRSIRTA 319
G ++ +A
Sbjct: 339 GTAKANESA 347
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRS-HEFFPGTTDRIIMISGTIDEILRAVDLVID 103
+ G +IG+GGS I+D + SGARI ++++ H+ T +R+ I GT A+ L+ +
Sbjct: 297 MVGCIIGRGGSKISDIRKTSGARISIAKAPHDE---TGERMFTIMGTAKANESALFLLYE 353
Query: 104 KLLTELHAEDQADD 117
L E Q D
Sbjct: 354 NLEAEKMRRSQMQD 367
>gi|255550830|ref|XP_002516463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544283|gb|EEF45804.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 306
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 31/219 (14%)
Query: 1 METNESSYVPSPDVHGKRSTAP---VKSLS-SDPTEKP----TYI-----RFLVSNPLAG 47
++ N +S S D + S+AP +KSLS S P+ P TY+ + + N G
Sbjct: 93 VDNNGASGFDSNDNNKGFSSAPPNDLKSLSNSAPSAIPVSYGTYLGSSSKKIEIPNGRVG 152
Query: 48 AVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT 107
+IGKGG TI Q QSGA+IQ++R + P + R++ + G D+I +A ++L++
Sbjct: 153 VIIGKGGETIKYLQIQSGAKIQVTRDMDADPNSPTRMVELMGNPDQIAKA-----EQLIS 207
Query: 108 ELHAEDQADDVGTKTK----------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
E+ AE GT ++ + +PN+ G +IGK G +IK+ + A I++
Sbjct: 208 EVLAEADVGGSGTVSRRFTGQGGSEHFVMKIPNNKVGLVIGKGGDSIKNMQARTGARIQV 267
Query: 158 SRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSE 194
L H G DR V + GT ++ A +L+ +SE
Sbjct: 268 IPL-HLPPGDTSTDRNVHIEGTSEQIELAKQLVNEAISE 305
>gi|345796405|ref|XP_535832.3| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 2 [Canis lupus familiaris]
Length = 531
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 128 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 185
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 186 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 241
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 242 ISSLQDLSIYN-PERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNQQANLIPGLNL 300
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP--HNTAAH-------YGPNMGGRKFQNNKDDRTN 257
+ G+F +G +P A P P P H A H Y P+ G ++
Sbjct: 301 SALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 360
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 361 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 418
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 419 KAQGRIFGKL 428
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 128 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 185
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 186 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 216
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 217 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 250
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 251 YNPERTITVKGTVEACANAEVEIMKKLREAFENDML 286
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 362 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 419
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 420 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 476
Query: 157 ISR 159
+ R
Sbjct: 477 VPR 479
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 362 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 419
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 420 AQGRIFGKLKEENFFN 435
>gi|189188542|ref|XP_001930610.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972216|gb|EDU39715.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 364
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 41/303 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G R +S+ G DR++ ++G++ I +
Sbjct: 47 LRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSK---VVQGVHDRVLSVTGSLSGISK 103
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A L LL A + T +RL++ ++ G+IIG+ G IK D S +
Sbjct: 104 AYGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 163
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTV- 204
V + L S +R+V + G+ +A+ I L +D LY+ + V
Sbjct: 164 MVAQKEMLPQS----TERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNPVVRVQ 219
Query: 205 ------PYTYAGVFFSGF----------HGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
P + G SG HG + PP + AA P
Sbjct: 220 PGAGPGPLSNGGSAPSGSMGGRSYNRTGHGADFSDSPPAFSRRSGSDAASRPPP----PT 275
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + I + + +G ++GRGG I EI + S ARI ++ T ER T
Sbjct: 276 HTEDGEEMQTQNISIPSDMVGCIIGRGGTKISEIRKTSNARISIAKA--PHDDTGERMFT 333
Query: 309 ISG 311
I+G
Sbjct: 334 ITG 336
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 110 HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
H ED +++ T+ + +P+ G IIG+ G I S A I I++ H G +
Sbjct: 276 HTED-GEEMQTQN---ISIPSDMVGCIIGRGGTKISEIRKTSNARISIAKAPHDDTG--E 329
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTL 197
R+ T+TG+ +AL L+ L + +
Sbjct: 330 RMFTITGSASANEKALYLLYENLEAEKM 357
>gi|154275678|ref|XP_001538690.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415130|gb|EDN10492.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|225556762|gb|EEH05050.1| KH domain RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 363
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 130/309 (42%), Gaps = 54/309 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ G DR++ ++G + +
Sbjct: 46 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVQGVHDRVLTVTGPLQGTAK 102
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A +V LL +L A + GT +RL++ ++ G+IIG+ G IK D S
Sbjct: 103 AYAIVAKGLLEGAPQLGMGGVASNNGTH-PVRLLISHNQMGTIIGRQGLKIKYIQDASGV 161
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA-- 209
+ V + L S +R+V + GT + +A+ I L +D T TV Y A
Sbjct: 162 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAVWEIGKCLIDD-WQRGTGTVLYNPAVR 216
Query: 210 --------------GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD-- 253
G G+ G Y A + GG ++N D
Sbjct: 217 ASVGGGPLNNSLGSGASTGGYGGRSYNRT---------GNGADFSDQTGGYNRRSNSDAA 267
Query: 254 -----------DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
+ + I + + +G ++GRGG I EI + SGARI ++ T
Sbjct: 268 SRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKA--PHDET 325
Query: 303 SERKVTISG 311
ER TI G
Sbjct: 326 GERMFTIMG 334
>gi|365766932|gb|EHN08421.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 413
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D ++R L A ++G G+TI+ +S++ ARI +S + G +RI+
Sbjct: 59 SPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNN---IRGVPERIVY 115
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ GT D++ +A +++ LL E ED +D+ + + L++P+ G IIGK G+ ++
Sbjct: 116 VRGTCDDVAKAYGMIVRALLEEHGNEDNGEDI--EISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D S A K+ + NDR++T+ G D
Sbjct: 174 IEDLSAA--KLFASPNQLLLSNDRILTINGVPD 204
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 55/213 (25%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D D+V + LR++ I+G GATI ++ A I IS ++ G+ +R+V
Sbjct: 58 DSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINIS---NNIRGVPERIV 114
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
+ GT D+ +A +I+ L E+ HG
Sbjct: 115 YVRGTCDDVAKAYGMIVRALLEE---------------------HGN------------- 140
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
++N +D S+ + + +G ++G+ G + EI +S A++
Sbjct: 141 ----------------EDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFA 184
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
S S ++R +TI+G +I A I Q
Sbjct: 185 SPNQLLLS--NDRILTINGVPDAIHIATFYISQ 215
>gi|301759723|ref|XP_002915742.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Ailuropoda melanoleuca]
Length = 599
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNQQANLIPGLNL 368
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP--HNTAAH-------YGPNMGGRKFQNNKDDRTN 257
+ G+F +G +P A P P P H A H Y P+ G ++
Sbjct: 369 SALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 428
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 486
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 487 KAQGRIFGKL 496
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACANAEVEIMKKLREAFENDML 354
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 487
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 488 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 544
Query: 157 ISR 159
+ R
Sbjct: 545 VPR 547
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 487
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 488 AQGRIFGKLKEENFFN 503
>gi|240276217|gb|EER39729.1| KH domain-containing protein [Ajellomyces capsulatus H143]
Length = 551
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 68/312 (21%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + L G +IG+ G ++ +S +G RIQ + + P ++ R+ I+G+ R
Sbjct: 182 VESSLVGLIIGRQGESLRRIESDTGTRIQFLDNAD--PSSSVRLCKITGS-----RVARG 234
Query: 101 VIDKLLTELHAEDQADDVGTKTK--------------------LRLIVPNSSCGSIIGKA 140
+ +T + +E A GT+T +R++VP+ + G IIG+
Sbjct: 235 DVKAEITRIISESSASRSGTRTDRPGHMPPKATSQSAQDDEDAVRIMVPDRTVGLIIGRG 294
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT--LY 198
G TI+ + S + I + S GL R V L G+ D RA LIL + DT L
Sbjct: 295 GETIRDLQERSGCHVNIVNENKSINGL--RPVNLIGSPDATERAKNLILEIVESDTRQLA 352
Query: 199 SQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNS 258
+ T P AA+ G + ++ N
Sbjct: 353 NPTQREP-----------------------------RAAY----GGDQPGGGPGGEKIND 379
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + + +G ++G+GG I E+ ++G RI + ++R+VT+ G + +I
Sbjct: 380 MMF-IPPDAVGMIIGKGGDTIKEMQAVTGCRINIQ---SPVGRDADREVTLVGSRAAIEE 435
Query: 319 AESMIMQKVAYA 330
A+ MIM+K+ A
Sbjct: 436 AKRMIMEKIDSA 447
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P K+ S + +R +V + G +IG+GG TI D Q +SG + + ++ G
Sbjct: 263 PPKATSQSAQDDEDAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKSINGL- 321
Query: 82 DRIIMISGTIDEILRAVDLVID-------KLLTELHAEDQA---------DDVGTKTKLR 125
R + + G+ D RA +L+++ +L E +A G K
Sbjct: 322 -RPVNLIGSPDATERAKNLILEIVESDTRQLANPTQREPRAAYGGDQPGGGPGGEKINDM 380
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN-DRLVTLTGTLDEQMRA 184
+ +P + G IIGK G TIK QAV S G + DR VTL G+ A
Sbjct: 381 MFIPPDAVGMIIGKGGDTIKEM----QAVTGCRINIQSPVGRDADREVTLVGSRAAIEEA 436
Query: 185 LELILLKL 192
+I+ K+
Sbjct: 437 KRMIMEKI 444
>gi|357465709|ref|XP_003603139.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492187|gb|AES73390.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R + P + R++ + GT D + A
Sbjct: 89 KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDAVSSA 148
Query: 98 VDLVIDKLLTELHAEDQADDVGTKT--------KLRLIVPNSSCGSIIGKAGATIKSFMD 149
L I+++L E AE A GT+ + + +PN+ G IIGK G TIK
Sbjct: 149 EKL-INEVLAE--AEAGASVGGTRRMVAQSGGDEFVMQIPNNKVGLIIGKGGETIKGMQA 205
Query: 150 DSQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELI 188
+ A I++ L H G +R + + GT D+ A +L+
Sbjct: 206 STGARIQVIPL-HPPPGDTSTERTLKIDGTPDQIESAKQLV 245
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 86/220 (39%), Gaps = 58/220 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
Q G+ K+ +PN G +IGK G TIK S A I+++R + R+V
Sbjct: 79 QQGGSYGSSKKIE--IPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMV 136
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
L GT D A +LI L+E
Sbjct: 137 ELMGTPDAVSSAEKLINEVLAE-------------------------------------- 158
Query: 233 HNTAAHYGPNMGGRK---FQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
A G ++GG + Q+ D+ + + + +G ++G+GG I + +GAR
Sbjct: 159 ----AEAGASVGGTRRMVAQSGGDE----FVMQIPNNKVGLIIGKGGETIKGMQASTGAR 210
Query: 290 IKV----SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
I+V GD ++ER + I G I +A+ ++ Q
Sbjct: 211 IQVIPLHPPPGDT---STERTLKIDGTPDQIESAKQLVNQ 247
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 99/223 (44%), Gaps = 44/223 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
R LV GA+IG+ G I ++ ARI++ + PG +R +MIS DE
Sbjct: 123 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKIL---DGPPGVPERAVMISAK-DEPDA 178
Query: 97 AVDLVIDKLLTELHAE--DQAD--------DVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ +D LL +H D +D G RL+VP+S GS+IGK GATIKS
Sbjct: 179 PLSPAMDGLL-RVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKS 237
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI-------LLKLSEDTLYS 199
D S+++++I +DR+V + G +A+ELI L+ S L+
Sbjct: 238 IQDSSKSIVRIVENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRKFLVDRSVLPLFE 297
Query: 200 QTMTVPYTYAGVFFSGFHGMP-YGAVPPPVPAVPHNTAAHYGP 241
M + HGMP VPPP H+GP
Sbjct: 298 AHMKM------------HGMPREQPVPPP---------QHWGP 319
>gi|398365639|ref|NP_009792.3| Pbp2p [Saccharomyces cerevisiae S288c]
gi|586350|sp|P38151.1|PBP2_YEAST RecName: Full=PAB1-binding protein 2
gi|536633|emb|CAA85196.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946618|gb|EDN64840.1| pbp1p binding protein [Saccharomyces cerevisiae YJM789]
gi|190408618|gb|EDV11883.1| PAB1-binding protein 2 [Saccharomyces cerevisiae RM11-1a]
gi|207347516|gb|EDZ73659.1| YBR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272922|gb|EEU07890.1| Pbp2p [Saccharomyces cerevisiae JAY291]
gi|285810563|tpg|DAA07348.1| TPA: Pbp2p [Saccharomyces cerevisiae S288c]
gi|323310022|gb|EGA63217.1| Pbp2p [Saccharomyces cerevisiae FostersO]
gi|323334658|gb|EGA76032.1| Pbp2p [Saccharomyces cerevisiae AWRI796]
gi|323338741|gb|EGA79957.1| Pbp2p [Saccharomyces cerevisiae Vin13]
gi|323349811|gb|EGA84026.1| Pbp2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356159|gb|EGA87964.1| Pbp2p [Saccharomyces cerevisiae VL3]
gi|392301080|gb|EIW12169.1| Pbp2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 413
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D ++R L A ++G G+TI+ +S++ ARI +S + G +RI+
Sbjct: 59 SPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNN---IRGVPERIVY 115
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ GT D++ +A +++ LL E ED +D+ + + L++P+ G IIGK G+ ++
Sbjct: 116 VRGTCDDVAKAYGMIVRALLEEHGNEDNGEDI--EISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D S A K+ + NDR++T+ G D
Sbjct: 174 IEDLSAA--KLFASPNQLLLSNDRILTINGVPD 204
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 55/213 (25%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D D+V + LR++ I+G GATI ++ A I IS ++ G+ +R+V
Sbjct: 58 DSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINIS---NNIRGVPERIV 114
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
+ GT D+ +A +I+ L E+ HG
Sbjct: 115 YVRGTCDDVAKAYGMIVRALLEE---------------------HGN------------- 140
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
++N +D S+ + + +G ++G+ G + EI +S A++
Sbjct: 141 ----------------EDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFA 184
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
S S ++R +TI+G +I A I Q
Sbjct: 185 SPNQLLLS--NDRILTINGVPDAIHIATFYISQ 215
>gi|290878251|emb|CBK39310.1| Pbp2p [Saccharomyces cerevisiae EC1118]
Length = 413
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D ++R L A ++G G+TI+ +S++ ARI +S + G +RI+
Sbjct: 59 SPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNN---IRGVPERIVY 115
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ GT D++ +A +++ LL E ED +D+ + + L++P+ G IIGK G+ ++
Sbjct: 116 VRGTCDDVAKAYGMIVRALLEEHGNEDNGEDI--EISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D S A K+ + NDR++T+ G D
Sbjct: 174 IEDLSAA--KLFASPNQLLLSNDRILTINGVPD 204
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 55/213 (25%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D D+V + LR++ I+G GATI ++ A I IS ++ G+ +R+V
Sbjct: 58 DSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINIS---NNIRGVPERIV 114
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
+ GT D+ +A +I+ L E+ HG
Sbjct: 115 YVRGTCDDVAKAYGMIVRALLEE---------------------HGN------------- 140
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
++N +D S+ + + +G ++G+ G + EI +S A++
Sbjct: 141 ----------------EDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFA 184
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
S S ++R +TI+G +I A I Q
Sbjct: 185 SPNQLLLS--NDRILTINGVPDAIHIATFYISQ 215
>gi|255561653|ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1, putative [Ricinus communis]
Length = 544
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T R + + G VIGKGG TI + Q QSGA+IQ+++ + P + R + + GT ++I
Sbjct: 86 TSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADPHSLTRDVELMGTSEQI 145
Query: 95 LRAVDLVIDKLLTELHAEDQADDV--GTKTK------LRLIVPNSSCGSIIGKAGATIKS 146
RA +L+ D ++ E A A G TK + VPN G +IGK G TIK
Sbjct: 146 SRAEELIND-VIAETDAGGSASSAVHGLNTKQPGAEQFSIRVPNDKVGLLIGKGGETIKY 204
Query: 147 FMDDSQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELI 188
S A ++I L H G +R V + G ++ A EL+
Sbjct: 205 MQSRSGARMQIIPL-HLPPGDPTTERTVYINGLTEQIEAAKELV 247
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 51/220 (23%)
Query: 110 HAEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGL 167
+A Q+ G++ T R+ +P+ G +IGK G TIK+ S A I+I++ D + L
Sbjct: 73 YASQQSQYHGSQGTSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADPHSL 132
Query: 168 NDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPP 227
R V L GT ++ RA ELI ++E G S HG+
Sbjct: 133 T-RDVELMGTSEQISRAEELINDVIAETDA-----------GGSASSAVHGL-------- 172
Query: 228 VPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISG 287
N K +I V ++ +G ++G+GG I + SG
Sbjct: 173 ----------------------NTKQPGAEQFSIRVPNDKVGLLIGKGGETIKYMQSRSG 210
Query: 288 ARIKV----SDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
AR+++ GD T+ER V I+G I A+ ++
Sbjct: 211 ARMQIIPLHLPPGDP---TTERTVYINGLTEQIEAAKELV 247
>gi|349576607|dbj|GAA21778.1| K7_Pbp2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 413
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D ++R L A ++G G+TI+ +S++ ARI +S + G +RI+
Sbjct: 59 SPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNN---IRGVPERIVY 115
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ GT D++ +A +++ LL E ED +D+ + + L++P+ G IIGK G+ ++
Sbjct: 116 VRGTCDDVAKAYGMIVRALLEEHGNEDNGEDI--EISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D S A K+ + NDR++T+ G D
Sbjct: 174 IEDLSAA--KLFASPNQLLLSNDRILTINGVPD 204
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 55/213 (25%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D D+V + LR++ I+G GATI ++ A I IS ++ G+ +R+V
Sbjct: 58 DSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINIS---NNIRGVPERIV 114
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
+ GT D+ +A +I+ L E+ HG
Sbjct: 115 YVRGTCDDVAKAYGMIVRALLEE---------------------HGN------------- 140
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
++N +D S+ + + +G ++G+ G + EI +S A++
Sbjct: 141 ----------------EDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFA 184
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
S S ++R +TI+G +I A I Q
Sbjct: 185 SPNQLLLS--NDRILTINGVPDAIHIATFYISQ 215
>gi|341894976|gb|EGT50911.1| hypothetical protein CAEBREN_13773 [Caenorhabditis brenneri]
Length = 397
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 136/350 (38%), Gaps = 77/350 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS+ AGA+IGKGG I +++ A +Q+ S+ T +R+ ++ +L
Sbjct: 52 VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSN-----TPERVCTVTADEKTVLN 106
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+ V+ +L D + +R+++ S G++IG+ G+ IK + A +K
Sbjct: 107 ILKDVLPRLEDNFSERDPCE-------VRMLIHQSHAGALIGRNGSKIKELREKCSARLK 159
Query: 157 ISRLDHSYYGLNDRLVTLTGT-------LDEQMRALELILLK----------------LS 193
I G DR++ +G ++E MR L+ I +K +S
Sbjct: 160 I--FTGCAPGSTDRVLITSGEQKNVLAIIEEVMRELKEIPIKGSATPYLPSFHYDPSNIS 217
Query: 194 EDTLYSQTMTV----------------------------------PYTYAGVFFSGFHGM 219
E + TM+ P ++ F F G
Sbjct: 218 EYGGFPGTMSSGGPPNSRGPSQQRGGQGPPGGPRSYGGAVTPGGGPRSFEAGDFQQFRGG 277
Query: 220 PYGAVPPPVPAVPHNTAAHYG--PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGR 277
P P P G P G + + + + + G ++GRGG
Sbjct: 278 PVQGYAMNAPGYPPQQGQFGGAPPANTGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGE 337
Query: 278 NIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
I I Q SGA+I + +G ER +TI G ++ I +A+ ++ Q V
Sbjct: 338 RIARIRQDSGAQITLEPS----NGQPERIITIKGTEQQIHSAQYLLQQCV 383
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R L+ AGA+IG+ GS I + + + AR+++ PG+TDR+++ SG
Sbjct: 124 PCEVRMLIHQSHAGALIGRNGSKIKELREKCSARLKIFTG--CAPGSTDRVLITSGEQKN 181
Query: 94 ILRAVDLVIDKL 105
+L ++ V+ +L
Sbjct: 182 VLAIIEEVMREL 193
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 252 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 307
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 308 ISSLQDLSIYN-PERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNL 366
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP--HNTAAH-------YGPNMGGRKFQNNKDDRTN 257
+ G+F +G +P A P P P H A H Y P+ G ++
Sbjct: 367 SALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 426
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 427 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 484
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 485 KAQGRIFGKL 494
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 251
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 252 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 282
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 283 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 316
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 317 YNPERTITVKGTVEACANAEIEIMKKLREAFENDML 352
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 428 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 485
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 486 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 542
Query: 157 ISR 159
+ R
Sbjct: 543 VPR 545
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 428 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 485
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 486 AQGRIFGKLKEENFFN 501
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV GAVIG+ G I +S ARI++ + PG +R +MIS
Sbjct: 126 SVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKIL---DGPPGVPERAVMISAKDEPD 182
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+D +LR + D L +E + G RL+VP S GS+IGK GATI
Sbjct: 183 ALVSPAVDGLLRVHKRITDGLDSETDQPQRG--AGPVGPTRLLVPASQAGSLIGKQGATI 240
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
KS D S+ ++I +DR+V + G + +A+ELI L
Sbjct: 241 KSIQDASKCALRILENVPPVALNDDRVVEIQGEPLDVHKAVELIASHL 288
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACATAEIEIMKKLREAFENDMLAVNQQANLIPGLNL 368
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP--HNTAAH-------YGPNMGGRKFQNNKDDRTN 257
+ G+F +G +P A P P P H A H Y P+ G ++
Sbjct: 369 SALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 428
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 486
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 487 KAQGRIFGKL 496
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + TAE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACATAEIEIMKKLREAFENDML 354
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 487
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 488 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 544
Query: 157 ISR 159
+ R
Sbjct: 545 VPR 547
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 487
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 488 AQGRIFGKLKEENFFN 503
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 124/313 (39%), Gaps = 63/313 (20%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI------ 91
R L + + G+VIGK G IN + +S AR+++ + FPG DRII I I
Sbjct: 39 RILCPDGVIGSVIGKSGKVINSIRHESRARVKVV---DPFPGAKDRIITIYCHIKEKEDV 95
Query: 92 ---------------DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSI 136
+ L V I + L D+ + K + +++VP S +I
Sbjct: 96 DVDDDFNHTNPLCAAQDALLKVHAAISNAVASLGDSDKR--LRDKEECQILVPASQSANI 153
Query: 137 IGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRALELI 188
IGKAGATIK ++ IKI D HS D + +TG + + + A+ I
Sbjct: 154 IGKAGATIKRLRSKTRTSIKIIAKDSTDPTHSCAMDFDNFLLITGESEAVKKALFAVSAI 213
Query: 189 LLKLS--EDTLYSQTMT-----------VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
+ K + E+ T+ VP G F+ + PP+ H
Sbjct: 214 MYKFNPKEEIPLEATVPEPPPSIIIPSDVPIYQPGGFYPNAEPIVSSRSVPPILGATHIP 273
Query: 236 AAHYGPNMGGR------------KFQNNKDDRTNSLTIGVAD--EHIGFVVGRGGRNIME 281
+MG F N R L I V + IG V+G+GG I
Sbjct: 274 ELQGYGDMGSSWPVYTSTLPVVPSFGNVS--RYEELIIRVLCPFDKIGRVIGKGGSTIKS 331
Query: 282 ISQISGARIKVSD 294
I Q SGARI+V D
Sbjct: 332 IRQASGARIEVDD 344
>gi|301116557|ref|XP_002906007.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109307|gb|EEY67359.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 550
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 118/301 (39%), Gaps = 70/301 (23%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V L G +IG+GG TI D Q +SGA IQ+ R E P T DR + I+G D + A L
Sbjct: 188 VPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTADRFVNIAGNQDTLELAQKL 247
Query: 101 VIDKLLTELHAEDQA------DDVGTKTK-----------LRLIVPNSSCGSIIGKAGAT 143
I L+ E A DD + + ++VPN G IIG+ G T
Sbjct: 248 -IQNLIDERQQNQGAGGFRERDDRDRMARYGGINPDGSDSVEIMVPNERVGLIIGRGGCT 306
Query: 144 IKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
IK+ + + I + D ++ + RL+T+ GT++ + A I +S++
Sbjct: 307 IKAIQQRTGTSVTIPQTPDPNHPEM--RLITIRGTMEAKEAAKFEIQSMVSDE------- 357
Query: 203 TVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIG 262
P H A G ++ +
Sbjct: 358 --------------------------PGQRHGYGATSG----------------QTIYMQ 375
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESM 322
V ++ +G ++G+ G I I RI++ D S R ++I GP ++ A+
Sbjct: 376 VPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVADEGSNPPVRTISIQGPAPNLAGAKEE 435
Query: 323 I 323
+
Sbjct: 436 V 436
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD-RIIMISGTIDEIL 95
+ +V N G +IG+GG TI Q ++G + + ++ + P + R+I I GT+ E
Sbjct: 287 VEIMVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPD--PNHPEMRLITIRGTM-EAK 343
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A I ++++ + + + + VPN G IIGK G TIK D I
Sbjct: 344 EAAKFEIQSMVSDEPGQRHGYGATSGQTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRI 403
Query: 156 KISRL 160
+I ++
Sbjct: 404 QIPQV 408
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 249 QNN----KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSE 304
QNN D ++S + V E +G+++GRGG I ++ SGA I++ + T++
Sbjct: 170 QNNYGPGNDAHSSSYDMKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTAD 229
Query: 305 RKVTISGPQRSIRTAESMIM 324
R V I+G Q ++ A+ +I
Sbjct: 230 RFVNIAGNQDTLELAQKLIQ 249
>gi|449277028|gb|EMC85335.1| Insulin-like growth factor 2 mRNA-binding protein 1, partial
[Columba livia]
Length = 519
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 139/328 (42%), Gaps = 62/328 (18%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP K P + P +R LV GA+IGK G+TI + Q+ ++I + R G
Sbjct: 131 APAKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GA 183
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I I T + A ++++ + E AD+V L+++ N+ G +IGK
Sbjct: 184 AEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIGKE 239
Query: 141 GATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE----- 194
G +K D++ I IS L D + Y +R +T+ G+++ RA + I+ K+ E
Sbjct: 240 GRNLKKVEQDTETKITISSLQDLTLYN-PERTITVKGSIENCCRAEQEIMKKVREAYEND 298
Query: 195 -DTLYSQTMTVP---YTYAGVFFSGFH-----------GMPYGAVPPPVPAVPHNTAAHY 239
+ Q+ +P G+F + PY + PP
Sbjct: 299 VAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVSGAAPYSSFMPP------------ 346
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
++ + + + +G ++G+ G++I ++S+ + A IK++
Sbjct: 347 ---------------EQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPD 391
Query: 300 SGTSERKVTISGPQRSIRTAESMIMQKV 327
S R V I+GP + A+ I K+
Sbjct: 392 SKV--RMVVITGPPEAQFKAQGRIYGKL 417
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 142 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISIHSTPEGCSA 199
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A ++IL + ++ ++T VP AH
Sbjct: 200 ACKMILEIMQKEAKDTKTAD--------------------------EVPLKILAH----- 228
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 229 ------NN---------------FVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNP 267
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV AY +D
Sbjct: 268 ERTITVKGSIENCCRAEQEIMKKVREAYEND 298
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P E+ T F+ + + GA+IGK G I + A I+++ P + R+++I+G
Sbjct: 345 PPEQETVHVFIPAQAV-GAIIGKKGQHIKQLSRFASASIKIAPPE--TPDSKVRMVVITG 401
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ +A + KL E + ++V +T +R VP S+ G +IGK G T+ +
Sbjct: 402 PPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKGGKTVNELQN 458
Query: 150 DSQAVIKISR 159
+ A + + R
Sbjct: 459 LTAAEVVVPR 468
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 125/280 (44%), Gaps = 25/280 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T R++ G+VIG+GG + + ++ A+I++ E PG +R++ I DE
Sbjct: 42 TVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIG---ETVPGCEERVVTIYSPSDET 98
Query: 95 -------------LRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
A+ V D+++ E DQ DD G + +L+VP+ G +IGK G
Sbjct: 99 NAVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGG 158
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYGL--NDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ +++ ++ A I+I + DH +D LV +TG +AL I +L ++ S
Sbjct: 159 SIVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHDNPSRS 218
Query: 200 Q---TMTVPYTY--AGVFFSGFHGMPYGAVPPPVPAVP--HNTAAHYGPNMGGRKFQNNK 252
Q T VP Y G G P + P V A + P ++
Sbjct: 219 QHLLTSAVPGVYPAGGSLIGPGAGAPIVGIAPLVGAYGGYKGDTGDWPPRSMYSAPRDEA 278
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
+ S+ + +IG V+G+GG I +I Q SGA IKV
Sbjct: 279 STKEFSVRLVCPTGNIGGVIGKGGMIINQIRQESGATIKV 318
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 41/211 (19%)
Query: 22 PVKSLSSDPTE----KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRS---- 73
P +S+ S P + K +R + G VIGKGG IN + +SGA I++ S
Sbjct: 266 PPRSMYSAPRDEASTKEFSVRLVCPTGNIGGVIGKGGMIINQIRQESGATIKVDSSTTEG 325
Query: 74 ---------HEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-K 123
EFF T S TI+ +R L +E D G +
Sbjct: 326 DECLIAISTKEFFEET------FSPTIEAAVR---------LQPRCSEKVERDSGIISFT 370
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQ 181
RL+VP S G +IGK G+ I ++A I+I ++ +D +V ++G LD
Sbjct: 371 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIISKENLPKIASEDDEMVQISGDLDIA 430
Query: 182 MRALELILLKL------SEDTLYSQTMTVPY 206
AL +L +L E L S +PY
Sbjct: 431 KDALVHVLTRLRANLFDREGALSSFLPVLPY 461
>gi|388855866|emb|CCF50441.1| related to poly(rC)-binding protein 3 [Ustilago hordei]
Length = 440
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 15/177 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+R LVS AG +IGKGG+ + + + Q+G + +S+ PG DR++ ++GT+ I
Sbjct: 44 LVRALVSTKEAGIIIGKGGANVAELREQTGVKAGVSK---VVPGVHDRVLSVTGTLVGIS 100
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTK-----TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
A L+ +L L+A QAD + + +RL++ ++ G++IG+ G IK D
Sbjct: 101 DAFALIAKTILENPLNAPVQADGTPAQAAAQTSSVRLLISHNLMGTVIGRQGLKIKHIQD 160
Query: 150 DSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
S A + S+ L S +R+V + G++D A+ I L+ED SQ + +
Sbjct: 161 LSGARMVASKEMLPQS----TERVVEVQGSVDAIRVAVHQIARCLAEDCDRSQNVVL 213
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 47/210 (22%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+R +V G IIGK GA + + + +S++ G++DR++++TGTL
Sbjct: 45 VRALVSTKEAGIIIGKGGANVAELREQTGVKAGVSKV---VPGVHDRVLSVTGTLVGISD 101
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A LI + E+ L + P P AA
Sbjct: 102 AFALIAKTILENPLNA-------------------------PVQADGTPAQAAAQ----- 131
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
T+S+ + ++ +G V+GR G I I +SGAR+ S + ++
Sbjct: 132 ------------TSSVRLLISHNLMGTVIGRQGLKIKHIQDLSGARMVASK--EMLPQST 177
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASDR 333
ER V + G +IR A I + +A DR
Sbjct: 178 ERVVEVQGSVDAIRVAVHQIARCLAEDCDR 207
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSR-SHEFFPGTTDRIIMISGTIDEILRAVDLVID 103
+ G +IGKGGS I + + SG+RI +++ H+ T +R+ I GT + +A+ L+ +
Sbjct: 354 MVGCIIGKGGSKITEIRRLSGSRISIAKVPHDE---TGERMFTIQGTPEANEKALFLLYN 410
Query: 104 KLLTE 108
+L TE
Sbjct: 411 QLETE 415
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 175 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 232
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 233 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 288
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 289 ISSLQDLSIYN-PERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNL 347
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP--HNTAAH-------YGPNMGGRKFQNNKDDRTN 257
+ G+F +G +P A P P P H A H Y P+ G ++
Sbjct: 348 SALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 407
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 408 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 465
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 466 KAQGRIFGKL 475
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 175 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 232
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 233 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 263
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 264 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 297
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 298 YNPERTITVKGTVEACANAEIEIMKKLREAFENDML 333
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 409 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 466
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 467 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 523
Query: 157 ISR 159
+ R
Sbjct: 524 VPR 526
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 409 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 466
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 467 AQGRIFGKLKEENFFN 482
>gi|325089918|gb|EGC43228.1| KH domain-containing protein [Ajellomyces capsulatus H88]
Length = 551
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 68/312 (21%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + L G +IG+ G ++ +S +G RIQ + + P ++ R+ I+G+ R
Sbjct: 182 VESSLVGLIIGRQGESLRRIESDTGTRIQFLDNAD--PSSSVRLCKITGS-----RVARG 234
Query: 101 VIDKLLTELHAEDQADDVGTKTK--------------------LRLIVPNSSCGSIIGKA 140
+ +T + +E A GT+T +R++VP+ + G IIG+
Sbjct: 235 DVKAEITRIISESSASRSGTRTDRPGHMPPKATSQSAQDDEDAVRIMVPDRTVGLIIGRG 294
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT--LY 198
G TI+ + S + I + S GL R V L G+ D RA LIL + DT L
Sbjct: 295 GETIRDLQERSGCHVNIVNENKSINGL--RPVNLIGSPDATERAKNLILEIVESDTRQLA 352
Query: 199 SQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNS 258
+ T P AA+ G + ++ N
Sbjct: 353 NPTQREP-----------------------------RAAY----GGDQPGGGPGGEKIND 379
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + + +G ++G+GG I E+ ++G RI + ++R+VT+ G + +I
Sbjct: 380 MMF-IPPDAVGMIIGKGGDTIKEMQAVTGCRINIQ---SPVGRDADREVTLVGSRGAIEE 435
Query: 319 AESMIMQKVAYA 330
A+ MIM+K+ A
Sbjct: 436 AKRMIMEKIDSA 447
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P K+ S + +R +V + G +IG+GG TI D Q +SG + + ++ G
Sbjct: 263 PPKATSQSAQDDEDAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKSINGL- 321
Query: 82 DRIIMISGTIDEILRAVDLVID-------KLLTELHAEDQA---------DDVGTKTKLR 125
R + + G+ D RA +L+++ +L E +A G K
Sbjct: 322 -RPVNLIGSPDATERAKNLILEIVESDTRQLANPTQREPRAAYGGDQPGGGPGGEKINDM 380
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN-DRLVTLTGTLDEQMRA 184
+ +P + G IIGK G TIK + I I S G + DR VTL G+ A
Sbjct: 381 MFIPPDAVGMIIGKGGDTIKEMQAVTGCRINI----QSPVGRDADREVTLVGSRGAIEEA 436
Query: 185 LELILLKL 192
+I+ K+
Sbjct: 437 KRMIMEKI 444
>gi|440636503|gb|ELR06422.1| hypothetical protein GMDG_02138 [Geomyces destructans 20631-21]
Length = 365
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 130/306 (42%), Gaps = 35/306 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ G DRI+ I+G D I +
Sbjct: 50 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVQGVHDRILTITGGCDAISK 106
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL V T ++L++ ++ G+IIG+ G IK D S +
Sbjct: 107 AYAIVAKALLEGAPMMGMGGLVSTTGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVR 166
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT----- 207
V + L S +R+V + GT + +A+ + K D T TV Y
Sbjct: 167 MVAQKEMLPQS----TERIVEVQGTPEGIQKAI-WEMCKCLIDDWERGTGTVLYNPVVRT 221
Query: 208 ----------YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF----QNNKD 253
G +S M G P GR +N ++
Sbjct: 222 QTGGGQGGIRNEGREYSSPRVMRTGNGADFSQEAPRTFNRRSDGETAGRGVPTHDENGEE 281
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+T +++I + +G ++GRGG I EI + SGARI ++ T ER TI G
Sbjct: 282 IQTQNISI--PSDMVGCIIGRGGSKISEIRKTSGARISIAKA--PHDDTGERMFTIMGSA 337
Query: 314 RSIRTA 319
++ TA
Sbjct: 338 KANETA 343
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 23/192 (11%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG-----SCPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGTKT------KLRLIVPNSSCGSI 136
++G + I +A L+ K ++ H + G LRLIVP S CGS+
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDVPGSGAGGGGGVSRPPITLRLIVPASQCGSL 123
Query: 137 IGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IGK G+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 IGKGGSKIKEIREVTGASIQVASEMLPNS----TERAVTISGTSEAITQCIYHICCVMLE 179
Query: 195 DTLYSQTMTVPY 206
+ T+PY
Sbjct: 180 SP--PKGATIPY 189
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 85/208 (40%), Gaps = 60/208 (28%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
DD +RLI+ GSIIGK G +K F ++S A I IS D S +R+VT+T
Sbjct: 12 DDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINIS--DGS---CPERIVTVT 66
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVP-------PPV 228
G + +A LI K E + S FH +P PP+
Sbjct: 67 GPTNSIFKAFTLICKKFEE-----------------WCSQFHDVPGSGAGGGGGVSRPPI 109
Query: 229 PAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
+L + V G ++G+GG I EI +++GA
Sbjct: 110 -----------------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGA 140
Query: 289 RIKVSDRGDFFSGTSERKVTISGPQRSI 316
I+V+ + ++ER VTISG +I
Sbjct: 141 SIQVAS--EMLPNSTERAVTISGTSEAI 166
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
Q +++T+ +T V +E IG ++G+GG I EI QISGA I++S+ + G ++R +T
Sbjct: 365 QPAANNQTHEMT--VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTIT 422
Query: 309 ISGPQRSIRTAESMIMQKV 327
I+G ++ A+ +I V
Sbjct: 423 ITGNPDAVALAQYLINMSV 441
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A L
Sbjct: 377 VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYL 436
Query: 101 V 101
+
Sbjct: 437 I 437
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 433
Query: 185 LELI 188
LI
Sbjct: 434 QYLI 437
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 253 DDRTNSLTIGV--ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
DD + +LTI + + +G ++G+ G + + SGA+I +SD ER VT++
Sbjct: 12 DDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-----GSCPERIVTVT 66
Query: 311 GPQRSIRTAESMIMQKVAYASDRLMD 336
GP SI A ++I +K + D
Sbjct: 67 GPTNSIFKAFTLICKKFEEWCSQFHD 92
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNL 368
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP--HNTAAH-------YGPNMGGRKFQNNKDDRTN 257
+ G+F +G +P A P P P H A H Y P+ G ++
Sbjct: 369 SALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 428
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 486
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 487 KAQGRIFGKL 496
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACANAEIEIMKKLREAFENDML 354
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 487
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 488 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 544
Query: 157 ISR 159
+ R
Sbjct: 545 VPR 547
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 487
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 488 AQGRIFGKLKEENFFN 503
>gi|402593291|gb|EJW87218.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 359
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 39/315 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS+ AG +IGKGG I +S+ A + + S T +RI I T++ +L
Sbjct: 41 LRLLVSSRGAGGIIGKGGENIKRLRSEYDANVTVPDSQ-----TPERIATIVATVENVLS 95
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
V +I K L + + + D +LR++V +S G++IG+ G+ IK ++ +K
Sbjct: 96 IVTEIIPK-LDDRTLQSREGDSNRPIELRVLVHSSHAGAVIGRQGSKIKEMKEELGVQMK 154
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
+ +R+V++ G D+ + + I+ L E + + +T P Y +F+
Sbjct: 155 V--FAQCPPQSTERVVSIKGAPDKILACVNHIMNMLKEIPI--KGVTKP--YESMFYDPS 208
Query: 217 HGMPYGAVPP------PVPAVPHNTAAHYGPNMGGRKFQNNKDDR--------------T 256
+ YG PP P+ P + YG GR FQ R
Sbjct: 209 YSSEYGGYPPDRNYRGPMIRGPMAVTS-YGNY--GRSFQRQIGGRGPLSAVALPPYMGPE 265
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
S + + +E G ++G+GG I + + SGA+I V + + + ER +TI+G +I
Sbjct: 266 ESTQVTIPNELGGTIIGKGGERINRVREESGAQIVVGPQQE----SGERIITITGTSTAI 321
Query: 317 RTAESMIMQKVAYAS 331
+TA+ ++ Q + S
Sbjct: 322 QTAQYLLQQWLVLVS 336
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ +P +R LV + AGAVIG+ GS I + + + G +Q+ + P +T+R++ I G
Sbjct: 116 SNRPIELRVLVHSSHAGAVIGRQGSKIKEMKEELG--VQMKVFAQCPPQSTERVVSIKGA 173
Query: 91 IDEILRAVDLVIDKL 105
D+IL V+ +++ L
Sbjct: 174 PDKILACVNHIMNML 188
>gi|354484186|ref|XP_003504271.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Cricetulus griseus]
Length = 487
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 184
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AED + + L+++ N G +IGK G +K ++ I
Sbjct: 185 ACRMILEIMQKE--AED--TKLAEEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 240
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT+D A I+ KL E + M +++G +F
Sbjct: 241 ISSLQDLSIYN-PERTITVKGTIDACANAEMEIMKKLRE--AFENDMLAVNSHSG-YFPN 296
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ + P + P ++ + + + +G ++G+
Sbjct: 297 MYPHHHFGPFPHHHSYPEQ----------------------ETVNLFIPTQAVGAIIGKK 334
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 335 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 384
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GTID
Sbjct: 208 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTIDACAN 267
Query: 97 AVDLVIDKLLTELHAED------------------------QADDVGTKTKLRLIVPNSS 132
A ++ I K L E D + + L +P +
Sbjct: 268 A-EMEIMKKLREAFENDMLAVNSHSGYFPNMYPHHHFGPFPHHHSYPEQETVNLFIPTQA 326
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 327 VGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKL 384
Query: 193 SEDTLYS 199
E+ ++
Sbjct: 385 KEENFFN 391
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 184
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +EDT ++ VP AH G
Sbjct: 185 ACRMILEIMQKEAEDTKLAE-----------------------------EVPLKILAHNG 215
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 216 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 249
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 250 YNPERTITVKGTIDACANAEMEIMKKLREAFENDML 285
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 318 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 375
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 376 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 432
Query: 157 ISR 159
+ R
Sbjct: 433 VPR 435
>gi|400593892|gb|EJP61786.1| KH domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 373
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 129/314 (41%), Gaps = 41/314 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G D I R
Sbjct: 48 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGGCDAISR 104
Query: 97 AVDLVIDKLLTELHAEDQADDV-GTKTK-LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL A + G T ++L++ ++ G++IG+ G IK D S +
Sbjct: 105 AYAIVARALLEGAPAMGMGGILQGNGTHPIKLLISHNQMGTVIGRQGLKIKHIQDVSGVR 164
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT----- 207
V + L S +R+V + GT + RAL I L +D T TV Y
Sbjct: 165 MVAQKEMLPQS----TERIVEVQGTPEGIQRALWEICKCLVDD-WQRGTGTVLYNPVVRT 219
Query: 208 -----YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGG--RKFQNNKD------- 253
F G P V N GG R F D
Sbjct: 220 QPGTTGGTGSTGSFGATGNGRAEYSSPRVMRTGNGSDFSNGGGGTRPFSRRSDSDAASRG 279
Query: 254 --------DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSER 305
+ + I + + +G ++GR G I EI + SGARI ++ T ER
Sbjct: 280 PPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA--PHDETGER 337
Query: 306 KVTISGPQRSIRTA 319
TI G ++ +A
Sbjct: 338 MFTIMGTAKANESA 351
>gi|71019141|ref|XP_759801.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
gi|46099599|gb|EAK84832.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
Length = 442
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGKGG+ + + + Q+G + +S+ PG DR++ ++GT+ I
Sbjct: 54 LRALVSTKEAGIIIGKGGANVAELREQTGVKAGVSK---VVPGVHDRVLSVTGTLVGISD 110
Query: 97 AVDLVIDKLLTE-LHAEDQADD-----VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
A L+ +L L+A QAD T +RL++ ++ G++IG+ G IK D
Sbjct: 111 AFALIAKTILENPLNAPVQADGSPAEAAAQTTSVRLLISHNLMGTVIGRQGLKIKHIQDL 170
Query: 151 SQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
S A + S+ L S +R+V + G++D A+ I L+ED +Q + +
Sbjct: 171 SGARMVASKEMLPQS----TERVVEVQGSVDAIRVAIHEIAKCLAEDWDRAQNVVL 222
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 21 APVKSLSSDPTE---KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
APV++ S P E + T +R L+S+ L G VIG+ G I Q SGAR+ S+ E
Sbjct: 126 APVQADGS-PAEAAAQTTSVRLLISHNLMGTVIGRQGLKIKHIQDLSGARMVASK--EML 182
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
P +T+R++ + G++D I A+ I K L E
Sbjct: 183 PQSTERVVEVQGSVDAIRVAIH-EIAKCLAE 212
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 47/214 (21%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
+LR +V G IIGK GA + + + +S++ G++DR++++TGTL
Sbjct: 53 QLRALVSTKEAGIIIGKGGANVAELREQTGVKAGVSKV---VPGVHDRVLSVTGTLVGIS 109
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
A LI + E+ L + P P AA
Sbjct: 110 DAFALIAKTILENPLNA-------------------------PVQADGSPAEAAA----- 139
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
+T S+ + ++ +G V+GR G I I +SGAR+ S + +
Sbjct: 140 ------------QTTSVRLLISHNLMGTVIGRQGLKIKHIQDLSGARMVASK--EMLPQS 185
Query: 303 SERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
+ER V + G +IR A I + +A DR +
Sbjct: 186 TERVVEVQGSVDAIRVAIHEIAKCLAEDWDRAQN 219
>gi|348668189|gb|EGZ08013.1| hypothetical protein PHYSODRAFT_339892 [Phytophthora sojae]
Length = 644
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 125/305 (40%), Gaps = 78/305 (25%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V L G +IG+GG TI D Q +SGA IQ+ R E P T DR + I+G D A+DL
Sbjct: 196 VPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRFVNITGNQD----ALDL 251
Query: 101 ---VIDKLLTELHAEDQA------DDV------------GTKTKLRLIVPNSSCGSIIGK 139
+I L+ E A DD GT + + L+VPN G IIG+
Sbjct: 252 AQRLIQNLIDERQQNQGAGGFRERDDRDRMARYGGINPDGTDS-VELLVPNERVGLIIGR 310
Query: 140 AGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
G TIK+ + + I + D ++ + RL+T+ GT++ + A I ++E+
Sbjct: 311 GGCTIKAIQQRTGTSVTIPQTPDPNHPDM--RLITIRGTMEAKEAAKFEIHSMINEE--- 365
Query: 199 SQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNS 258
P G +GM G +
Sbjct: 366 ------PGQRHG------YGMASG----------------------------------QT 379
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + V ++ +G ++G+ G I I RI++ D S R ++I GP +++
Sbjct: 380 IYMQVPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVPDPGSNPPVRTISIQGPPQNLTG 439
Query: 319 AESMI 323
A+ +
Sbjct: 440 AKEEV 444
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD-RIIMISGTIDEIL 95
+ LV N G +IG+GG TI Q ++G + + ++ + P D R+I I GT+ E
Sbjct: 295 VELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPD--PNHPDMRLITIRGTM-EAK 351
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A I ++ E + + + + + VPN G IIGK G TIK D I
Sbjct: 352 EAAKFEIHSMINEEPGQRHGYGMASGQTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRI 411
Query: 156 KISRL 160
+I ++
Sbjct: 412 QIPQV 416
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
AHYGP D +S + V E +G+++GRGG I ++ SGA I++
Sbjct: 179 AHYGPG---------SSDGQSSYDMKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREE 229
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIM 324
+ T +R V I+G Q ++ A+ +I
Sbjct: 230 EGAPQTPDRFVNITGNQDALDLAQRLIQ 257
>gi|225559888|gb|EEH08170.1| KH domain-containing protein [Ajellomyces capsulatus G186AR]
gi|225559938|gb|EEH08220.1| KH domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 551
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 68/312 (21%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + L G +IG+ G ++ +S +G RIQ + + P ++ R+ I+G+ R
Sbjct: 182 VESSLVGLIIGRQGESLRRIESDTGTRIQFLDNAD--PSSSVRLCKITGS-----RVARG 234
Query: 101 VIDKLLTELHAEDQADDVGTKTK--------------------LRLIVPNSSCGSIIGKA 140
+ +T + +E A GT+T +R++VP+ + G IIG+
Sbjct: 235 DVKAEITRIISESSASRSGTRTDRPGHMPPKATSQSAQDDEDAVRIMVPDRTVGLIIGRG 294
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT--LY 198
G TI+ + S + I + S GL R V L G+ D RA LIL + DT L
Sbjct: 295 GETIRDLQERSGCHVNIVNENKSINGL--RPVNLIGSPDATERAKNLILEIVESDTRQLA 352
Query: 199 SQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNS 258
+ T P AA+ G + ++ N
Sbjct: 353 NPTQREP-----------------------------RAAY----GGDQPGGGPGGEKIND 379
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + + +G ++G+GG I E+ ++G RI + ++R+VT+ G + +I
Sbjct: 380 MMF-IPPDAVGMIIGKGGDTIKEMQAVTGCRINIQ---SPVGRDADREVTLVGSRGAIEE 435
Query: 319 AESMIMQKVAYA 330
A+ MIM+K+ A
Sbjct: 436 AKRMIMEKIDSA 447
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P K+ S + +R +V + G +IG+GG TI D Q +SG + + ++ G
Sbjct: 263 PPKATSQSAQDDEDAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKSINGL- 321
Query: 82 DRIIMISGTIDEILRAVDLVID-------KLLTELHAEDQA---------DDVGTKTKLR 125
R + + G+ D RA +L+++ +L E +A G K
Sbjct: 322 -RPVNLIGSPDATERAKNLILEIVESDTRQLANPTQREPRAAYGGDQPGGGPGGEKINDM 380
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN-DRLVTLTGTLDEQMRA 184
+ +P + G IIGK G TIK + I I S G + DR VTL G+ A
Sbjct: 381 MFIPPDAVGMIIGKGGDTIKEMQAVTGCRINI----QSPVGRDADREVTLVGSRGAIEEA 436
Query: 185 LELILLKL 192
+I+ K+
Sbjct: 437 KRMIMEKI 444
>gi|398389867|ref|XP_003848394.1| hypothetical protein MYCGRDRAFT_111290 [Zymoseptoria tritici
IPO323]
gi|339468269|gb|EGP83370.1| hypothetical protein MYCGRDRAFT_111290 [Zymoseptoria tritici
IPO323]
Length = 879
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+ A VIGKGG + + +GA+ +S E+ G +RI+ +SG +D +
Sbjct: 136 HVRAIISSAEAATVIGKGGENVTQIRKMAGAKCTVS---EYTRGAVERILTVSGLVDAVA 192
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E DQ +KT LRL++P+ GSIIGK G I+ + S A
Sbjct: 193 KAFGLIIRTLNQE--PLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGAR 250
Query: 155 IKIS 158
+ S
Sbjct: 251 LNAS 254
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+ +P ++P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 199 IRTLNQEPLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASES-- 256
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R +++ G D + A V L+ +L
Sbjct: 257 CLPLSTERSLVVLGVADAVHIATYYVGSTLVEQL 290
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT
Sbjct: 417 GQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNN---NERLVTITGTQ 473
Query: 179 DEQMRALELILLKL 192
+ AL ++ +L
Sbjct: 474 ECNQMALYMLYSRL 487
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
A+H GP + Q + + I + ++ +G ++G+GG I EI Q+SG+ IK+++
Sbjct: 401 ASHAGPPQ--QPMQGMVPGQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEP 458
Query: 296 GDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
D +ER VTI+G Q + A M+ ++
Sbjct: 459 QD---NNNERLVTITGTQECNQMALYMLYSRL 487
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + +R++ I+GT +
Sbjct: 418 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NNNERLVTITGTQE 474
Query: 93 EILRAVDLVIDKLL 106
A+ ++ +L+
Sbjct: 475 CNQMALYMLYSRLV 488
>gi|395323015|gb|EJF55548.1| hypothetical protein DICSQDRAFT_175774 [Dichomitus squalens
LYAD-421 SS1]
Length = 246
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 38/236 (16%)
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADD 117
Q ++G LS E PG ++++ + G+++ A L+ L+ L + D
Sbjct: 3 LQEETGVTASLS---EAIPGVGEQVLRVLGSVESATEAYFLIASDLIRTHPLRSTSVESD 59
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
T LRL++P++ GSIIG+ G IK+ S A +IS +H + ++ L GT
Sbjct: 60 SAPTTCLRLLIPHNMLGSIIGRHGRKIKAMHASSGA--QISTREHMLPNSTEHIMQLCGT 117
Query: 178 LDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
+ RA+ I L ED AG FH PA P ++
Sbjct: 118 SESIRRAVRDICLCFLEDDELC---------AGTVL--FH-----------PAAPDQPSS 155
Query: 238 HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
G R F D V + +G ++GRGG NI E+ ++SGA I ++
Sbjct: 156 PVTQPTGTRPFTREID---------VPSDMVGSIIGRGGTNINEMKRMSGAEIVIA 202
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 22/187 (11%)
Query: 20 TAPVKSLSSDPTEKPT-YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
T P++S S + PT +R L+ + + G++IG+ G I + SGA+I +R H P
Sbjct: 48 THPLRSTSVESDSAPTTCLRLLIPHNMLGSIIGRHGRKIKAMHASSGAQIS-TREH-MLP 105
Query: 79 GTTDRIIMISGTIDEILRAV-----------DLVIDKLLTELHAEDQADD-----VGTKT 122
+T+ I+ + GT + I RAV +L +L A DQ GT+
Sbjct: 106 NSTEHIMQLCGTSESIRRAVRDICLCFLEDDELCAGTVLFHPAAPDQPSSPVTQPTGTRP 165
Query: 123 KLRLI-VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
R I VP+ GSIIG+ G I S A I I++ G+ + VT+ T D
Sbjct: 166 FTREIDVPSDMVGSIIGRGGTNINEMKRMSGAEIVIAKAPRE--GVERQTVTIVETYDAY 223
Query: 182 MRALELI 188
RA L+
Sbjct: 224 KRARTLL 230
>gi|299116377|emb|CBN74642.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 762
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 124/312 (39%), Gaps = 82/312 (26%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL- 105
G +IGKGGS + + Q ++G ++ L + G +R + +SG++D + L+ +KL
Sbjct: 109 GMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLN 168
Query: 106 ------LTELHAEDQ-----------------------ADDVGTKTKLRLIVPNSSCGSI 136
L AE++ +D T +R I+ N+ CG +
Sbjct: 169 ARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGATDVSDMNDPNKITVVRWIMDNAHCGWL 228
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK G+ I++ S A ++++ +R+V + G ++ ALELI
Sbjct: 229 IGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKSQREAALELI-------- 280
Query: 197 LYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRT 256
T P V P+ P A H
Sbjct: 281 -----RTNPKITGRVAS---------------PSEPEVAAVH------------------ 302
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
V + +GF++G G +I +++ +GA+++V+ + +G E +V I+G + I
Sbjct: 303 ------VPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQI 356
Query: 317 RTAESMIMQKVA 328
A + +VA
Sbjct: 357 VAARHALQDRVA 368
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 137/311 (44%), Gaps = 55/311 (17%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
+DP K T +R+++ N G +IGKGGS I + ++ SGA+++++ + +RI+ +
Sbjct: 208 NDPN-KITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYV 266
Query: 88 SGTIDEILRAVDLV-IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
G + A++L+ + +T A +V + VP+ + G I+G GA+I++
Sbjct: 267 KGNKSQREAALELIRTNPKITGRVASPSEPEVAA-----VHVPSKAVGFILGHRGASIQA 321
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+ + A ++++ G + V +TG + + A + +++E +T P
Sbjct: 322 LTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAE----WRTSNNP- 376
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
+G P ++ +L + V
Sbjct: 377 ----------NGEP--------------------------------EEPEYTLKVAVPQP 394
Query: 267 HIGFVVGRGGRNIMEISQISGARIKV-SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+G ++G+GG + E+ ++ ++K+ D G V +SG ++ A+ MI++
Sbjct: 395 LVGHIIGKGGTFVREVLSVTNVQVKIQQDTGSPTMWGDACCVMLSGTFGNVVRAQRMILE 454
Query: 326 KVAYASDRLMD 336
++A SDRL +
Sbjct: 455 RIANTSDRLKE 465
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 18/202 (8%)
Query: 110 HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
H E + K L ++ P+ + G +IGK G+ ++ + + + + G +
Sbjct: 85 HHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKE 144
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVP 229
R V L+G+LD +LI KL+ + T P F M Y A
Sbjct: 145 RGVGLSGSLDCVANVEKLIFEKLNARRV---TSLAPSPAEEEFE-----MAYEAA----- 191
Query: 230 AVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR 289
AA PN N ++ + + + H G+++G+GG I I SGA+
Sbjct: 192 -----KAAGIEPNGATDVSDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQ 246
Query: 290 IKVSDRGDFFSGTSERKVTISG 311
++V+ ++ER V + G
Sbjct: 247 VRVATERSLGKDSAERIVYVKG 268
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+++P + LV N + G++IGKGG TI +SG+ IQ+ E P +R + I T
Sbjct: 567 SKQPGGMLMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTI--T 624
Query: 91 IDE---ILRAVDLVIDKL 105
DE +++A +++ L
Sbjct: 625 SDEMPILMKAANMICAVL 642
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 32 EKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR-IIMISG 89
E+P Y ++ V PL G +IGKGG+ + + S + ++++ + D +M+SG
Sbjct: 381 EEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQVKIQQDTGSPTMWGDACCVMLSG 440
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNS 131
T ++RA ++++++ T +L+ +VPN+
Sbjct: 441 TFGNVVRAQRMILERI------------ANTSDRLKEMVPNA 470
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
L+I + +G ++G+GG + E+ + +G ++ + + G ER V +SG +
Sbjct: 99 LSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVAN 158
Query: 319 AESMIMQKV 327
E +I +K+
Sbjct: 159 VEKLIFEKL 167
>gi|426217760|ref|XP_004003120.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Ovis aries]
Length = 599
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 141/310 (45%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE----DTLYS--QTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E D L + Q +P
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLREAFENDMLAANQQANLIPGLNL 368
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP--HNTAAHYG-------PNMGGRKFQNNKDDRTN 257
+ G+F +G +P A P P P H A H G P+ G ++
Sbjct: 369 SALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLCPPHQFGPFPHHHSYPEQE 428
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 486
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 487 KAQGRIFGKL 496
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACASAEIEIMKKLREAFENDML 354
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 487
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 488 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 544
Query: 157 ISR 159
+ R
Sbjct: 545 VPR 547
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 487
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 488 AQGRIFGKLKEENFFN 503
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 23/192 (11%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG-----SCPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGTKT------KLRLIVPNSSCGSI 136
++G + I +A L+ K ++ H G LRLIVP S CGS+
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSL 123
Query: 137 IGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IGK G+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 IGKGGSKIKEIREVTGASIQVASEMLPNS----TERAVTISGTSEAITQCIYHICCVMLE 179
Query: 195 DTLYSQTMTVPY 206
+ T+PY
Sbjct: 180 SP--PKGATIPY 189
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 85/208 (40%), Gaps = 60/208 (28%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
DD +RLI+ GSIIGK G +K F ++S A I IS D S +R+VT+T
Sbjct: 12 DDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINIS--DGS---CPERIVTVT 66
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVP-------PPV 228
G + +A LI K E + S FH + G PP+
Sbjct: 67 GPTNSIFKAFTLICKKFEE-----------------WCSQFHDIQGGGAGGGGGVSRPPI 109
Query: 229 PAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
+L + V G ++G+GG I EI +++GA
Sbjct: 110 -----------------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGA 140
Query: 289 RIKVSDRGDFFSGTSERKVTISGPQRSI 316
I+V+ + ++ER VTISG +I
Sbjct: 141 SIQVAS--EMLPNSTERAVTISGTSEAI 166
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
Q +++T+ +T V +E IG ++G+GG I EI QISGA I++S+ + G ++R +T
Sbjct: 365 QPAANNQTHEMT--VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTIT 422
Query: 309 ISGPQRSIRTAESMI 323
I+G ++ A+ +I
Sbjct: 423 ITGNPDAVALAQYLI 437
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A L
Sbjct: 377 VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYL 436
Query: 101 V 101
+
Sbjct: 437 I 437
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 433
Query: 185 LELILLK 191
LI ++
Sbjct: 434 QYLINMR 440
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 253 DDRTNSLTIGV--ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
DD + +LTI + + +G ++G+ G + + SGA+I +SD ER VT++
Sbjct: 12 DDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD-----GSCPERIVTVT 66
Query: 311 GPQRSIRTAESMIMQKVAYASDRLMD 336
GP SI A ++I +K + D
Sbjct: 67 GPTNSIFKAFTLICKKFEEWCSQFHD 92
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 139/347 (40%), Gaps = 70/347 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
R LV G +IG+ G I ++ AR+++ + PGT R +MIS
Sbjct: 49 FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKIL---DGPPGTVQRAVMISAKEEPGSS 105
Query: 90 ---TIDEILRAVDLVIDKLLTEL-HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+D +LR +ID L ++ HA V K +L+VP S GS+IGK G T+K
Sbjct: 106 VPPAVDGLLRVHKRIIDGLESDFTHA---PSGVAGKVSTKLLVPASQAGSLIGKQGGTVK 162
Query: 146 SFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELI---LLKLSED----T 196
S + S ++++ D + L +DR+V + G +ALELI L K D
Sbjct: 163 SIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRKFLVDRGVIP 222
Query: 197 LYSQTMTVPYTYAGVFFSGFH--GMPYG-------------------------------A 223
++ M T+ G P G
Sbjct: 223 IFEMNMQTANTHHAEHMPPHQSWGPPQGLPPNVGGGSGFGPPSQYMPPPRQLDSYYPPAE 282
Query: 224 VPPPVPAVPHNTAAHYGPNMG-GRKFQNNKDDRTNSLT-----IGVADEHIGFVVGRGGR 277
+PPPV PH + YG + G +N + +T + + + V+G G
Sbjct: 283 MPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLSYADAVIGTAGA 342
Query: 278 NIMEISQISGARIKVSD-RGDFFSGTSERKVTISGPQRSIRTAESMI 323
+I I + SGA + + + RG E V ISG ++TA+ +I
Sbjct: 343 SISYIRRASGATVTIQEARGV----PGEMTVEISGTASQVQTAQQLI 385
>gi|261197389|ref|XP_002625097.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595727|gb|EEQ78308.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239606718|gb|EEQ83705.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327358051|gb|EGE86908.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 363
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 129/309 (41%), Gaps = 54/309 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ G DR++ ++G + +
Sbjct: 46 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVQGVHDRVLTVTGPLQGTAK 102
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A +V LL +L + GT +RL++ ++ G+IIG+ G IK D S
Sbjct: 103 AYAIVAKGLLEGAPQLGMGGVVSNTGTH-PVRLLISHNQMGTIIGRQGLKIKYIQDASGV 161
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA-- 209
+ V + L S +R+V + GT + +A+ I L +D T TV Y A
Sbjct: 162 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAVWEIGKCLIDD-WQRGTGTVLYNPAVR 216
Query: 210 --------------GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD-- 253
G G+ G Y A + GG ++N D
Sbjct: 217 ASVGGGPMNNSLGSGTAAGGYGGRSYNRT---------GNGADFSDQTGGYNRRSNSDAA 267
Query: 254 -----------DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
+ + I + + +G ++GRGG I EI + SGARI ++ T
Sbjct: 268 NRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKA--PHDET 325
Query: 303 SERKVTISG 311
ER TI G
Sbjct: 326 GERMFTIMG 334
>gi|28212254|ref|NP_783184.1| insulin-like growth factor 2 mRNA-binding protein 1 [Rattus
norvegicus]
gi|81866340|sp|Q8CGX0.1|IF2B1_RAT RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=B-actin zipcode-binding protein 1; Short=rZBP-1;
AltName: Full=IGF-II mRNA-binding protein 1; AltName:
Full=VICKZ family member 1
gi|27464838|gb|AAO16210.1| b-actin zipcode binding protein 1 [Rattus norvegicus]
gi|149053959|gb|EDM05776.1| insulin-like growth factor 2, binding protein 1 [Rattus norvegicus]
gi|171846741|gb|AAI61831.1| Insulin-like growth factor 2 mRNA binding protein 1 [Rattus
norvegicus]
Length = 577
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 135/298 (45%), Gaps = 28/298 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVPYTYA 209
IS L D + Y +R +T+ G ++ RA + I+ K+ E + Q+ +P
Sbjct: 312 ISSLQDLTLYN-PERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIP---- 366
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIG 269
G+ + P + P P AA YG M + + + + + +G
Sbjct: 367 GLNLAAVGLFPASSSAVPPPPSSVTGAAPYGSFM--------QAPEQEMVQVFIPAQAVG 418
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
++G+ G++I ++S+ + A IK++ S R V I+GP + A+ I K+
Sbjct: 419 AIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVVITGPPEAQFKAQGRIYGKL 474
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSS 255
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A ++IL + ++ ++T VP AH
Sbjct: 256 ACKMILEIMHKEAKDTKTAD--------------------------EVPLKILAH----- 284
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 285 ------NN---------------FVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNP 323
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV AY +D
Sbjct: 324 ERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP S P ++ ++ + GA+IGK G I + A I+++ P +
Sbjct: 394 APYGSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPDS 449
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 450 KVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKG 506
Query: 141 GATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 507 GKTVNELQNLTAAEVVVPR 525
>gi|154287628|ref|XP_001544609.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408250|gb|EDN03791.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 634
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 68/312 (21%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + L G +IG+ G ++ +S +G RIQ + + P ++ R+ I+G+ R
Sbjct: 265 VESSLVGLIIGRQGESLRRIESDTGTRIQFLDNAD--PSSSVRLCKITGS-----RVARG 317
Query: 101 VIDKLLTELHAEDQADDVGTKTK--------------------LRLIVPNSSCGSIIGKA 140
+ +T + +E A GT+T +R++VP+ + G IIG+
Sbjct: 318 DVKAEITRIISETSASRSGTRTDRPGHMPPKATSQSAQDDEDAVRIMVPDRTVGLIIGRG 377
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT--LY 198
G TI+ + S + I + S GL R V L G+ D RA LIL + DT L
Sbjct: 378 GETIRDLQERSGCHVNIVNENKSINGL--RPVNLIGSPDATERAKNLILEIVESDTRQLA 435
Query: 199 SQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNS 258
+ T P AA+ G + ++ N
Sbjct: 436 NPTQREPR-----------------------------AAY----GGDQPGGGPGGEKIND 462
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRT 318
+ + + +G ++G+GG I E+ ++G RI + ++R+VT+ G + +I
Sbjct: 463 MMF-IPPDAVGMIIGKGGDTIKEMQAVTGCRINIQ---SPVGRDADREVTLVGSRGAIEE 518
Query: 319 AESMIMQKVAYA 330
A+ MIM+K+ A
Sbjct: 519 AKRMIMEKIDSA 530
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P K+ S + +R +V + G +IG+GG TI D Q +SG + + ++ G
Sbjct: 346 PPKATSQSAQDDEDAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKSINGL- 404
Query: 82 DRIIMISGTIDEILRAVDLVID-------KLLTELHAEDQA---------DDVGTKTKLR 125
R + + G+ D RA +L+++ +L E +A G K
Sbjct: 405 -RPVNLIGSPDATERAKNLILEIVESDTRQLANPTQREPRAAYGGDQPGGGPGGEKINDM 463
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN-DRLVTLTGTLDEQMRA 184
+ +P + G IIGK G TIK QAV S G + DR VTL G+ A
Sbjct: 464 MFIPPDAVGMIIGKGGDTIKEM----QAVTGCRINIQSPVGRDADREVTLVGSRGAIEEA 519
Query: 185 LELILLKL 192
+I+ K+
Sbjct: 520 KRMIMEKI 527
>gi|356514579|ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797476 [Glycine max]
Length = 554
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 24/202 (11%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IGKGG TI Q QSGA+IQ++R + P ++ R + + GT + I A
Sbjct: 90 IPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGTPEAISSA--- 146
Query: 101 VIDKLLTELHAEDQADDVGTKTK----------LRLIVPNSSCGSIIGKAGATIKSFMDD 150
+KL+ E+ AE ++ G T+ + +PN+ G IIGK G TIK+
Sbjct: 147 --EKLINEVLAEAESGGSGIVTRRFTGQAGSDEFVMKIPNNKVGLIIGKGGETIKNMQAS 204
Query: 151 SQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLS-EDTLYSQTMTVPYT 207
+ A I++ L H G +R + + GT ++ A +L+ +S E+ + + M+
Sbjct: 205 TGARIQVIPL-HLPPGDTSTERTLKIDGTPEQIESAKQLVYQVISGENRVRNPAMS---- 259
Query: 208 YAGVFFSGFHGMPYGAVPPPVP 229
G G+ P PP P
Sbjct: 260 -GGYPQQGYQSRPPSNWAPPAP 280
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 257 NSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSI 316
+S I + + +G ++G+GG I + SGA+I+++ D +S R V + G +I
Sbjct: 84 SSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGTPEAI 143
Query: 317 RTAESMIMQKVAYA 330
+AE +I + +A A
Sbjct: 144 SSAEKLINEVLAEA 157
>gi|358056167|dbj|GAA97907.1| hypothetical protein E5Q_04587 [Mixia osmundae IAM 14324]
Length = 531
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 34/206 (16%)
Query: 11 SPDVHGKRST---APVKSLSSDP---TEKPTYI-RFLVSNPLAGAVIGKGGSTINDFQSQ 63
SP V K AP++S ++ P E PT I R LVS+ AG VIG+ G + D + +
Sbjct: 112 SPAVQPKEDAPPQAPIRSQAASPPGQAEAPTLIMRALVSSREAGIVIGRQGKNVADIREK 171
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----- 118
+ + +S+ PG ++R++ ++G I + RA L+ ++ D + +
Sbjct: 172 AQVKAGVSK---LVPGVSERVLTVTGQISGVARAFGLICQTIM------DNSSGIPNDSP 222
Query: 119 -------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLND 169
G+ LRL++ ++ G +IGKAG IKS S + S+ L S +
Sbjct: 223 STYTGLSGSTLTLRLLISSAQMGGVIGKAGTKIKSIQQTSGTRMAASKELLPQS----TE 278
Query: 170 RLVTLTGTLDEQMRALELILLKLSED 195
RLV ++G ++ +A+ I L ED
Sbjct: 279 RLVEISGRPEQVEKAVAEIAKALVED 304
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+S+ G VIGK G+ I Q SG R ++ S E P +T+R++ ISG +++ +
Sbjct: 235 LRLLISSAQMGGVIGKAGTKIKSIQQTSGTR--MAASKELLPQSTERLVEISGRPEQVEK 292
Query: 97 AVDLVIDKLLTELHAEDQADDVGT 120
AV + L+ ED+A VGT
Sbjct: 293 AVAEIAKALV-----EDEAKAVGT 311
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR-SHEF 76
R+ A + S + P + + + G +IGKGG IND + SG++I +++ +H+
Sbjct: 422 RANASIASAAHAPDPNLRTQNISIPSDMVGCIIGKGGQKINDIRKSSGSKISIAKTAHDE 481
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
T +R+ I+GT A+ L+ +L E + D+ G
Sbjct: 482 ---TGERMFTITGTAQNNETALFLLYGQLENEKERRLRMDEEG 521
>gi|148230152|ref|NP_001079663.1| RNA-binding protein Nova-1-like [Xenopus laevis]
gi|28302384|gb|AAH46731.1| MGC53786 protein [Xenopus laevis]
Length = 315
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 52/72 (72%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+L + V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVTI+GP + +
Sbjct: 231 TLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGPPGATQ 290
Query: 318 TAESMIMQKVAY 329
A+ +I Q+VAY
Sbjct: 291 AAQYLIGQRVAY 302
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 108 ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL 167
EL + Q+ T T+ +LIVPN++ G IIGK GAT+++ M++S A +++S+ + L
Sbjct: 22 ELQSNCQSPR--TFTQAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQLSQ-KPAGPNL 78
Query: 168 NDRLVTLTGTLDEQMRALELILLKLSED 195
++R+VT++G ++ +A+ I+ K ED
Sbjct: 79 HERVVTVSGEPNQVQKAICSIIHKSRED 106
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT R + I+G
Sbjct: 232 LEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITG 284
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + +V N AG +IGKGG+T+ + +SGA +QLS+ P +R++ +SG +++
Sbjct: 34 TQAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQLSQ-KPAGPNLHERVVTVSGEPNQV 92
Query: 95 LRAVDLVIDK 104
+A+ +I K
Sbjct: 93 QKAICSIIHK 102
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A+ + K L + VP + G+I+GK G T+ + + + A I+IS+ G R VT+
Sbjct: 223 AESLAGKETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTI 282
Query: 175 TGTLDEQMRALELI 188
TG A LI
Sbjct: 283 TGPPGATQAAQYLI 296
>gi|296812925|ref|XP_002846800.1| KH domain RNA binding protein [Arthroderma otae CBS 113480]
gi|238842056|gb|EEQ31718.1| KH domain RNA binding protein [Arthroderma otae CBS 113480]
Length = 477
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 155/411 (37%), Gaps = 117/411 (28%)
Query: 12 PDVHGKRSTAPVKSLSSDP-----------------TEKPT-------YIRFLVSNPLAG 47
PD TAPV +L + P T +P +IR ++S+ A
Sbjct: 84 PDAPNNGKTAPVPALETQPIQSTASHNDRATSNPPATSQPAQDETGWVHIRAVISSAEAA 143
Query: 48 AVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT 107
VIGKGG ++ + SGA+ +S G ++ IL A L+I L
Sbjct: 144 TVIGKGGENVSQIRRLSGAKCTVSDYSR-------------GAVERILTAFGLIIRTLNN 190
Query: 108 E-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYY 165
E L A A +KT LRL++P+ GSIIGK+G I+ + S A + S D
Sbjct: 191 EPLEAPSTAQ---SKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNAS--DSCLP 245
Query: 166 GLNDRLVTLTGTLDEQMRALELILLKLSED----------TLYS------------QTMT 203
+R + + G D A + + L E + Y+
Sbjct: 246 LSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQV 305
Query: 204 VPYT-------------------YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG---- 240
VPY A G +G+PY P P P P + HYG
Sbjct: 306 VPYVPQPAGGQYGHPDSLRRNNPQANRATPGGYGVPYMQQPGPHPHAPQ-PSLHYGASPR 364
Query: 241 ------------------PNMGGRKFQNNK------DDRTNSLTIGVADEHIGFVVGRGG 276
P GG N + + I + ++ +G ++G+GG
Sbjct: 365 QGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQPLTQQIYIPNDMVGAIIGKGG 424
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
I EI +SG+ IK+++ D ++ER VTI+G Q + A M+ ++
Sbjct: 425 AKINEIRHLSGSVIKINEPQD---NSNERLVTITGTQECNQMALYMLYSRL 472
>gi|452837822|gb|EME39763.1| hypothetical protein DOTSEDRAFT_74610 [Dothistroma septosporum
NZE10]
Length = 490
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+ A VIGKGG + + +GA+ +S E+ G +RI+ +SG +D +
Sbjct: 127 HVRAIISSAEAATVIGKGGENVTQIRRMAGAKCTVS---EYTRGAVERILTVSGLVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E DQ +KT LRL++P+ GSIIGK G I+ + S A
Sbjct: 184 KAFGLIIRTLNQE--PLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGAR 241
Query: 155 IKISR 159
+ S
Sbjct: 242 LNASE 246
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 137/324 (42%), Gaps = 47/324 (14%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+ +P ++P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 190 IRTLNQEPLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASES-- 247
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
P +T+R +++ G D + A V L+ +L R P +S +
Sbjct: 248 CLPLSTERSLVVLGVADAVHIATYYVGSTLVEQLTE-------------RFGGPAAS--N 292
Query: 136 IIGKAGATIKSFMDDSQAVIKISR-----LDHSYYGLNDRLVTLTGTLDEQMRALELILL 190
G+ G Q V + + + H Y N + T +
Sbjct: 293 YAGRHGGPQGVVPGGMQVVPYVPQHAGGQMGHPDYNRNKQHAQPQRTPAQPYGG------ 346
Query: 191 KLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA---HYGPNMGGRK 247
+ + QT P + +G PY P P P+ AA H GP +
Sbjct: 347 ---QQYMQGQTPLPPQQAPMGYGAGSPRAPYVGAGPQQPQ-PYGHAAPQAHAGPPQ--QP 400
Query: 248 FQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKV 307
Q + + I + ++ +G ++G+GG I EI Q+SG+ IK+++ D +ER V
Sbjct: 401 MQGMVPGQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NNNERLV 457
Query: 308 TISGPQRSIRTAESMIMQKVAYAS 331
TI+G Q + A M+ ++ +S
Sbjct: 458 TITGTQECNQMALYMLYSRLGESS 481
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT
Sbjct: 407 GQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNN---NERLVTITGTQ 463
Query: 179 DEQMRALELILLKLSEDTLYSQT 201
+ AL ++ +L E + S +
Sbjct: 464 ECNQMALYMLYSRLGESSKNSNS 486
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
+P H P++ + +P + + N + GA+IGKGG+ IN+ + SG+ I++
Sbjct: 389 APQAHAGPPQQPMQGMVPG---QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI 445
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ + +R++ I+GT + A+ ++ +L
Sbjct: 446 NEPQD---NNNERLVTITGTQECNQMALYMLYSRL 477
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 22/193 (11%)
Query: 14 VHG-KRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
VHG + + K P E + R LV G +IG+ G I ++ AR+++
Sbjct: 24 VHGGEEAVVAEKKWPGWPGE--SVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKIL- 80
Query: 73 SHEFFPGTTDRIIMISG----------TIDEILRAVDLVIDKLLTEL-HAEDQADDVGTK 121
+ PGT R +MIS +D +LR +ID L ++ HA V K
Sbjct: 81 --DGPPGTVQRAVMISAKEEPGSSVPPAVDGLLRIHKRIIDGLESDFTHA---PSGVAGK 135
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLD 179
+L+VP S GS+IGK G T+KS + S ++++ D + L +DR+V + G
Sbjct: 136 VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPA 195
Query: 180 EQMRALELILLKL 192
+ALELI L
Sbjct: 196 GVHKALELIASHL 208
>gi|298707114|emb|CBJ29906.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 308
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 27/175 (15%)
Query: 33 KPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
+P + ++ LV AG +IGKGG IN Q+ + R++LS+ +EFFPGT DR+ ++ G
Sbjct: 119 QPKFALKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQ 178
Query: 92 DEIL-RAVDLVIDKLLTELHAEDQADDVG------------------------TKTKLRL 126
++ AV ++ +L QA +G + +RL
Sbjct: 179 PTLVAEAVAEMLRRLREAARPTPQAPFMGGGVPYSTVHEGYGSGGLDGPHGRDAQVTIRL 238
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL-NDRLVTLTGTLDE 180
+VP ++ G IIG+ G TIK+ + A + ++ D G+ ++RL ++ ++ E
Sbjct: 239 LVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQPSMME 293
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 32/194 (16%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K L+++VP + G +IGK G I ++ +K+S+ + + G +DR+ + G E
Sbjct: 121 KFALKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQG---E 177
Query: 181 Q----MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTA 236
Q A+ +L +L E T P+ GV PY V
Sbjct: 178 QPTLVAEAVAEMLRRLRE--AARPTPQAPFMGGGV--------PYSTV------------ 215
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
H G GG + +D + ++ + V G ++GRGG I I +GAR+ ++ +
Sbjct: 216 -HEGYGSGGLDGPHGRDAQV-TIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKD 273
Query: 297 DFFSGT-SERKVTI 309
+G SER +I
Sbjct: 274 ADVAGVPSERLCSI 287
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG+ I +I + R+K+S + +FF GT +R + G Q +++ + VA
Sbjct: 134 GCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQ------PTLVAEAVA 187
Query: 329 YASDRLMD 336
RL +
Sbjct: 188 EMLRRLRE 195
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 147/356 (41%), Gaps = 64/356 (17%)
Query: 6 SSYVPSPDVHGKRSTAPVKSLSSDPTE-------KPTYIRFLVSNPLAGAVIGKGGSTIN 58
S Y PS + + A + S+SS+P + P ++ + + G VIGK GS I
Sbjct: 471 SLYHPSWEGKHRSDPAALASISSNPWQILAAAAVAPAFLEWKI-----GKVIGKKGSQIK 525
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMIS----GTIDEILRAVDL--VIDKLLTELHAE 112
+ ++GA I+++ T DR ++IS G D + L V+ LL +
Sbjct: 526 KLRDETGAHIKIADPMN---TTEDRAVLISSKNEGVSDRSCAELALLEVVTILLKDGDGA 582
Query: 113 DQADDVGTKTK-----LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH----S 163
+ +G + + RL++ S GS+IGKAGA IK+ S A +++ D S
Sbjct: 583 TPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASVRVLPSDQLPLCS 642
Query: 164 YYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHG----- 218
DRLV ++G + A+EL+ L ++ T P +F G G
Sbjct: 643 AACETDRLVQISGEVAAVQMAIELVAANLRDNPPKETVPTNPEAKTA-YFLGIDGNTGQQ 701
Query: 219 --MPYGAVPPPVPAVPHNTAAH-------YGPNMGGRKFQNNKDDRTN------------ 257
+P+ +V P + A + GP G N
Sbjct: 702 VLLPHSSVAAVYGHSPSSMALYGLQPHPLAGPAYAGGVLAQAPPLYANPAARLPPMLPKV 761
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS-------DRGDFFSGTSERK 306
S + V +G ++G+GG +I + +SGA IKV+ +R F GT E+K
Sbjct: 762 SAEMSVPSSVMGGLIGKGGFHISHMRSVSGATIKVNGSKESSVERTILFEGTQEQK 817
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 60/311 (19%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI---------- 87
R L + + G+VIGK G IN + + A+I++ + FPG DR+I I
Sbjct: 40 RILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVV---DPFPGAKDRVITIYCYVKEKEEV 96
Query: 88 ------------SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
D +L+ +++ + + E+ K + +++VP+S +
Sbjct: 97 EVDDEFNDKQPLCPAQDALLKVHAAIVNAVAS---LENSDKKKKDKEECQILVPSSQSAN 153
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRALEL 187
+IGKAGATIK ++A IKI+ D HS D V + G + + + A+
Sbjct: 154 VIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISA 213
Query: 188 ILLKLS--EDTLYSQTM-----------TVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHN 234
I+ K + E+ T+ VP AG F+ + PPV A H
Sbjct: 214 IMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHV 273
Query: 235 TAAHYGPNMGGRK--FQNN-------KDDRTNSLTIGVAD--EHIGFVVGRGGRNIMEIS 283
+MG + +N R+ L I V + IG V+GRGG +I +
Sbjct: 274 PELQGYSDMGSTWPVYSSNLPVVSGYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVR 333
Query: 284 QISGARIKVSD 294
+ SGA ++V D
Sbjct: 334 EASGAHVEVDD 344
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR---IIMISGT--I 91
IR L G VIG+GGS+I + SGA +++ + DR +I ++ T +
Sbjct: 309 IRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTK------ADRDECLITVTSTESV 362
Query: 92 DEILR-AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
D++ AV+ V LL + D+ DD +RL+VP+ G IIGK+G+ I
Sbjct: 363 DDLKSMAVEAV---LLLQAKINDEDDDT---VAIRLLVPSKIIGCIIGKSGSIINEIRKR 416
Query: 151 SQAVIKISRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
++A ++IS+ + ND L+ + G + AL I+L+L +D L + T T A
Sbjct: 417 TRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRD-TGHNTSA 475
Query: 210 GV--FFSGFHGMPYGAVPPPVPAV 231
G +SG G+ +V P P V
Sbjct: 476 GTDSLYSGGAGLSVSSVLPSAPPV 499
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 17/63 (26%)
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSD----RGD---FFSGTSERKVTISGPQRSIRTAE 320
+G V+G+GG NI I +ISGA I++SD RGD SGT E+K RTAE
Sbjct: 578 VGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQK----------RTAE 627
Query: 321 SMI 323
++I
Sbjct: 628 NLI 630
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE-FFPGTTDRIIM 86
+D + IR LV + + G +IGK GS IN+ + ++ A +++S+S D +I
Sbjct: 381 NDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSERPKCADANDELIE 440
Query: 87 ISGTIDEILRAVDLVIDKL 105
+ G + + A+ ++ +L
Sbjct: 441 VVGEVGSVRDALVQIVLRL 459
>gi|26336871|dbj|BAC32119.1| unnamed protein product [Mus musculus]
Length = 577
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 138/316 (43%), Gaps = 37/316 (11%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP K P + P +R LV GA+IGK G+TI + Q+ ++I + R G
Sbjct: 187 APAKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGA 239
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I + T + A ++++ + E AD+V L+++ N+ G +IGK
Sbjct: 240 AEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKE 295
Query: 141 GATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE----- 194
G +K D++ I IS L D + Y +R +T+ G ++ RA + I+ K+ E
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTLYN-PERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Query: 195 -DTLYSQTMTVP-YTYAGV-FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNN 251
+ Q+ +P A V F A P+++ P G
Sbjct: 355 VAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQ-APEQG------- 406
Query: 252 KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
+ + + + +G ++G+ G++I ++S+ + A IK++ S R V I+G
Sbjct: 407 ------MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVVITG 458
Query: 312 PQRSIRTAESMIMQKV 327
P + A+ I K+
Sbjct: 459 PPEAQFKAQGRIYGKL 474
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSS 255
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A ++IL + ++ ++T VP AH
Sbjct: 256 ACKMILEIMHKEAKDTKTAD--------------------------EVPLKILAH----- 284
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 285 ------NN---------------FVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNP 323
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV AY +D
Sbjct: 324 ERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP S P + ++ + GA+IGK G I + A I+++ P +
Sbjct: 394 APYSSFMQAPEQ--GMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPDS 449
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 450 KVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKG 506
Query: 141 GATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 507 GKTVNELQNLTAAEVVVPR 525
>gi|255732373|ref|XP_002551110.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131396|gb|EER30956.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 576
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 5 ESSYVP--SPDVHGKRSTAPVKSLSSD-PTEKPTYIRFLVSNPL--AGAVIGKGGSTIND 59
E +YVP S + H + ++ K +S+ + PT++ F + P+ A A++GK G TI+
Sbjct: 144 EPAYVPEASTESHAEEPSSSSKPISNHREKDDPTFVSFRMYCPVKEASAIVGKKGETISH 203
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
+ ++ RI +S + G +RI+ + G + + RA L+ +L E ED+ +
Sbjct: 204 LREKAAVRITVS---DNLKGVPERIVTVKGPAENVARAFGLITRVILNE--PEDEPASIN 258
Query: 120 T-KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
+ + L+L++P+ G IIGK+G + ++S A +K + Y DR++++ G
Sbjct: 259 SLQYNLKLLIPHPLIGFIIGKSGLKFREIEENSAAKLKAAETPLPYS--TDRVLSVMGVG 316
Query: 179 DEQMRALELILLKLSEDTLYSQTM 202
D A+ + + +S+ L Q +
Sbjct: 317 D----AIHIAVYYISQVILEHQEV 336
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 132/330 (40%), Gaps = 53/330 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ +PL G +IGK G + + S A+++ + + P +TDR++ + G D I
Sbjct: 264 LKLLIPHPLIGFIIGKSGLKFREIEENSAAKLKAAETP--LPYSTDRVLSVMGVGDAIHI 321
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVP-------NSSCGSIIGKAGATIKSFMD 149
AV I +++ E H E V K K+ L P +S + G+ G +
Sbjct: 322 AV-YYISQVILE-HQE-----VLKKNKIILYNPENNRYGGDSRDQQLGGRTGNHHQQSQL 374
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLT-----GTLDEQMRALELILLKLSEDTLYSQTMTV 204
Q +HS Y N+ + G + ++ Q
Sbjct: 375 HQQQQPPRHSSNHSSY--NNPMAYQPKMPPYGKSSHHQQQQPPQQQSPYNFSMMFQPSVQ 432
Query: 205 PYTYAGVFFSGFHGMPYGAVPPPVPAVPH--------NTA-----AHYGPNMGGRKFQNN 251
P + S + MP + P + P NT H G KF N
Sbjct: 433 PQQFGTSMVSSPNQMPTRGMQPSINVPPQSQYTDEFGNTLIGEVITHQPVQAGPEKF--N 490
Query: 252 KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGAR-IKVS-DRGD--FFSG----TS 303
+D + VA+ IG V+G+GG NI I + S +K+ D+G G T+
Sbjct: 491 QD-------VFVANSSIGSVIGKGGNNIKHIRETSACTYVKIEPDKGQSIMLGGGRGMTN 543
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASDR 333
RK+T++G SI+TA +I Q++ +R
Sbjct: 544 IRKLTLTGSMNSIQTAIYLINQRINADRER 573
>gi|449676986|ref|XP_002155841.2| PREDICTED: uncharacterized protein LOC100213921 [Hydra
magnipapillata]
Length = 643
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 132/299 (44%), Gaps = 40/299 (13%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N L G VIG+GG IN QS SGA+IQ++ DR I I+G+ + + +A L
Sbjct: 39 IPNKLVGLVIGRGGEMINRLQSDSGAKIQVAPDPPPNMMDIDRQITITGSSEAVSKAKQL 98
Query: 101 VIDKLLTELHAEDQ---ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
I+++ E ++ A ++ + + + + G +IGK G TIKS + + + +
Sbjct: 99 -IEQIRNEGKVPERLMLAANLPGEFSIEMKIAAGKVGLVIGKGGETIKSLQERAGCKMIL 157
Query: 158 SRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
+ D Y ++ + ++G + + +L+ +D + S+ + T + F+
Sbjct: 158 FQ-DGEYAQAAEKPLKISGEQSKVLYGKQLV-----QDLIVSKEIEADKTSCYI----FN 207
Query: 218 GMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGR 277
PY + PN G D+ I V E +GF++G G
Sbjct: 208 QSPY-----------TSDITSMVPNPG-------DPDQVGYEEIQVPREAVGFIIGSKGA 249
Query: 278 NIMEISQISGARIKVSD--RGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRL 334
NI I Q++G RI+ + G+F + T+ G ++I +++ + DR+
Sbjct: 250 NINNIQQMTGCRIQFKNEMEGEF------KTATLQGNPQAIVMGREKLLEILQAYQDRV 302
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 27/293 (9%)
Query: 17 KRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
KR T + S+ + T R+L G++IG GG ++++ ++I++S E
Sbjct: 25 KRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRIS---ET 81
Query: 77 FPGTTDRIIMI-SG---------TIDEILRAVDLVI---DKLLTELHAEDQADDVGTKTK 123
PG +R++ I SG T D I A D + D++L E D+ + +
Sbjct: 82 IPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQQIT 141
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH-SYYGLN-DRLVTLTGTLDEQ 181
+R++VP+ G +IGK G I++ ++ A I++ +H LN D L+ +TG
Sbjct: 142 VRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVV 201
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
+AL + +L ++ SQ + + +F SG G V P + GP
Sbjct: 202 KKALYQVAARLHDNPSRSQHQLL--SSPSIFRSGA-----GFVNPHAGTQVMGVTSLMGP 254
Query: 242 NMGGRKFQNNKDDRTNSLTIGVA--DEHIGFVVGRGGRNIMEISQISGARIKV 292
+ +K + + E++G V+G+GG I ++ Q SGA IKV
Sbjct: 255 YASYKSDGRSKSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKV 307
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 22 PVKSLSSDPTEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
P S SD K + +R + GAVIGKGG I + +SGA I++ +
Sbjct: 254 PYASYKSDGRSKSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAE 313
Query: 77 FPGTTDRIIMISG---------TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLI 127
D II +S TID +R + +E ++ D + T RL+
Sbjct: 314 ---GDDCIIFVSAKEAFEDQSPTIDATMR-----LQPRSSEKTEKESGDAILT---TRLL 362
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRAL 185
VP+S G +IGK G+ I + ++A I++ ++ +D +V +TG + AL
Sbjct: 363 VPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVATNAL 422
Query: 186 ELILLKLSEDTL 197
+L++L +T
Sbjct: 423 LQVLMRLRANTF 434
>gi|452978145|gb|EME77909.1| hypothetical protein MYCFIDRAFT_63821 [Pseudocercospora fijiensis
CIRAD86]
Length = 480
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+ A VIGKGG + + +GA+ +S E+ G +RI+ +SG +D +
Sbjct: 118 HVRAIISSAEAATVIGKGGENVTQIRRLAGAKCTVS---EYTRGAVERILTVSGHVDAVA 174
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E +QA +KT LRL++P+ GSIIGK G I+ + S A
Sbjct: 175 KAFGLIIRTLNQE--PLEQASTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGAR 232
Query: 155 IKIS 158
+ S
Sbjct: 233 LNAS 236
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT
Sbjct: 397 GQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNN---NERLVTITGTQ 453
Query: 179 DEQMRALELILLKLSEDTLYSQTM 202
+ AL ++ +L E + S ++
Sbjct: 454 ECNQMALYMLYSRLGESSKNSNSI 477
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
+S P K +R L+ + L G++IGK G I + Q SGAR+ S S P +T+R ++
Sbjct: 192 ASTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASES--CLPLSTERSLV 249
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
+ G D + A V L+ +L
Sbjct: 250 VLGVADAVHIATYYVGSTLVEQL 272
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGV 263
PY AG PYG P + AH GP + Q + + I +
Sbjct: 361 APYVGAGPQ----QPQPYGHAAP--------SQAHAGPPQ--QPVQGMVPGQPITQQIFI 406
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ +G ++G+GG I EI Q+SG+ IK+++ D +ER VTI+G Q + A M+
Sbjct: 407 PNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NNNERLVTITGTQECNQMALYML 463
Query: 324 MQKVAYAS 331
++ +S
Sbjct: 464 YSRLGESS 471
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + +R++ I+GT +
Sbjct: 398 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NNNERLVTITGTQE 454
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 455 CNQMALYMLYSRL 467
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 251 NKDDRTNSLTIG--VADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
++ D +N L + ++ V+G+GG N+ +I +++GA+ VS ++ G ER +T
Sbjct: 109 HQQDESNWLHVRAIISSAEAATVIGKGGENVTQIRRLAGAKCTVS---EYTRGAVERILT 165
Query: 309 ISG 311
+SG
Sbjct: 166 VSG 168
>gi|212542979|ref|XP_002151644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
gi|210066551|gb|EEA20644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
Length = 367
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 143/354 (40%), Gaps = 68/354 (19%)
Query: 4 NESSYVPS----PDVHGKRSTAPVKSLSSDPTEKPTY------IRFLVSNPLAGAVIGKG 53
N + VP+ D +G+ + L P + Y +R +VS+ AG +IGK
Sbjct: 7 NHDTSVPNDEVMSDAYGRGNIGESGELEDQPKTEEEYAQAVLTLRAIVSSKEAGVIIGKA 66
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT---ELH 110
G + D + ++G + +S+ G DR++ ++G + RA +V LL ++
Sbjct: 67 GKNVADLRDETGVKAGVSK---VVQGVHDRVLTVTGGLQGCARAYSIVAKGLLEGAPQVG 123
Query: 111 AEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS--QAVIKISRLDHSYYGLN 168
+ GT +RL++ ++ G+IIG+ G IK D S + V + L S
Sbjct: 124 MGGVVQNNGTHP-IRLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQS----T 178
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPV 228
+R+V + GT + +A+ I L +D T TV Y A G G P
Sbjct: 179 ERIVEVQGTPEGIEKAVWEIGKCLIDD-WQRGTGTVLYNPAVRVSVGGSGQP-------- 229
Query: 229 PAVPHN------------------TAAHYGPNMGGRKFQNNKDDRTNSL----------- 259
HN A + GG + + D+ S+
Sbjct: 230 ---SHNGDRTGGSYGGGRSYNRTGNGADFSEPSGGYNRRGSGDNANRSIPMVTDDGEEVQ 286
Query: 260 --TIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
I + + +G ++GRGG I EI + SGARI ++ T ER TI G
Sbjct: 287 TQNISIPADMVGCIIGRGGSKISEIRRSSGARISIAKA--PHDETGERMFTIMG 338
>gi|341896324|gb|EGT52259.1| hypothetical protein CAEBREN_15214 [Caenorhabditis brenneri]
Length = 862
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 39/292 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ---LSRSHEFFPGTTDRIIMISGTIDE 93
IR +V +IG GSTI + + R++ LS+ G +RI+ + G +
Sbjct: 321 IRCVVEGKYQSVIIGPHGSTIKEIAQSTHCRVEFVNLSKRERTVLGNNERILTVHGNAEH 380
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++ + +E +D D+VG LRL N CG +IGKAG++IK M +
Sbjct: 381 ASKAVSRILHVIQSEALKDD--DNVGVDIVLRLRAHNQLCGRLIGKAGSSIKEIMQKTGT 438
Query: 154 VIKISRLDHSYYG-----------LNDRLVTLTG-TLDEQMRALELILLKL-----SEDT 196
I +++ G L +R + + G +++ ++A LI KL S+
Sbjct: 439 NITVTKYIEPLGGPIGLRQDELLCLMERTIMVRGPSIEAVVQAESLISAKLKKCYESDSQ 498
Query: 197 LYSQTMTVPYTY----------AGVFFSG--FHGMPYGAVP----PPVPAVPHNTAAHYG 240
L +Q ++ P +G+ G F+ P G V PP + H+TA +
Sbjct: 499 LRAQALSAPMPMMMPPVAPPGASGMAVPGPQFYPSPAGVVQVQHFPPSQHLLHSTANNSF 558
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
G + + + + V D IG ++G G+NI I + +G+ +K+
Sbjct: 559 LQPGVLQIHPGVTN-LRQVRMWVPDNMIGALIGTKGKNIKMIIRETGSVVKI 609
>gi|346971553|gb|EGY15005.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 514
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 138/327 (42%), Gaps = 49/327 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G + I R
Sbjct: 49 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGGCEAISR 105
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A +V LL L GT ++L++ ++ G+IIG+ G IK D S
Sbjct: 106 AYAIVAQALLEGAPSLGMGGVPQSNGTH-PIKLLISHNQMGTIIGRQGLKIKHIQDVSGV 164
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGV 211
+ V + L S +R+V + GT D +RA + K D T TV Y V
Sbjct: 165 RMVAQKEMLPQS----TERIVEVQGTPD-GIRAAIWEISKCLVDDWQRGTGTV--LYNPV 217
Query: 212 FFSGFHGMP-YGAVPPPVPAV----------PH----NTAAHYGPNMGGRKFQNNKDD-- 254
+ P G P P+ P A + N GG++ + + D
Sbjct: 218 VRTQPGSTPAVGGTSPSYPSTGGGRSQEYSSPRVLRTGNGADFSSNGGGQRPYSRRSDSD 277
Query: 255 --------------RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+ I + + +G ++GR G I EI + SGARI ++
Sbjct: 278 AASRGPPTHDENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAP--HD 335
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
T ER TI G ++ +A ++ + +
Sbjct: 336 ETGERMFTIMGTSKANESALFLLYENL 362
>gi|336376793|gb|EGO05128.1| hypothetical protein SERLA73DRAFT_174106 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389739|gb|EGO30882.1| hypothetical protein SERLADRAFT_455154 [Serpula lacrymans var.
lacrymans S7.9]
Length = 335
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 34/293 (11%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R LVS AG +IGK G + D + Q+G + +S+ PG +R++ ISG+++
Sbjct: 29 PLSLRALVSTKEAGVIIGKAGKNVADLREQTGVKAGVSK---VIPGVHERVLAISGSVEA 85
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
+ +A ++ +L+T + + T +RL++ ++ G+IIG++G IK+ D S
Sbjct: 86 VAKAYTIITSQLVTSSSSLVSSPPPSLSHTVIRLLISHNLMGTIIGRSGLKIKAIQDVSG 145
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
A + S+ L S +R+V + GT + RA+E I L ED + + + + G
Sbjct: 146 ARMVASKDMLPQS----TERIVEVQGTPEAIGRAIEEIGRCLLED--WERGLGTVLFHPG 199
Query: 211 V------------FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNS 258
+ SG G N A + + RT +
Sbjct: 200 LGDDMSRSRKTANLLSGSGGSGR------THEESTNNLASSPVSPPPASPVQPANLRTQN 253
Query: 259 LTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
++I + +G ++GR G I EI ++SG++I ++ T ER TI G
Sbjct: 254 ISI--PSDMVGCIIGRSGSKITEIRRLSGSKISIAK--APHDETGERMFTIVG 302
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+S P + +R L G VIGKGG TI + SGAR+++ + D I
Sbjct: 299 ISGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKR----DCDECI 354
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ + + + + ++ +L L E DD G +RL++P+ G IIGK+G+ I
Sbjct: 355 ITISSFESLDDLKSMAVETVL--LLQEKINDDEGGTVIMRLLIPSKVIGCIIGKSGSIIN 412
Query: 146 SFMDDSQAVIKISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
++A I+IS+ D +D LV +TG + AL I+L+L +D L
Sbjct: 413 EIRKSTRADIRISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDAL 465
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 150/358 (41%), Gaps = 72/358 (20%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI-DEILR 96
R L + + G+VIGK G IN + ++ A+I++ + FPG DR+I I + D+
Sbjct: 39 RILCPDEVIGSVIGKSGKVINSIRQETRAKIKVV---DPFPGAKDRVITIFCFVKDKEDV 95
Query: 97 AVDLVIDKLLTELHAEDQADDVGT------------------KTKLRLIVPNSSCGSIIG 138
VD + T A+D V K + ++++P+S ++IG
Sbjct: 96 EVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSSQSANVIG 155
Query: 139 KAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL---ELILL 190
KAG+TIK ++ IKIS D HS D + G + RAL I+
Sbjct: 156 KAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMY 215
Query: 191 KL---SEDTLYSQTMTVP-----------YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTA 236
K E L + P Y+ G++ S +P ++PP + A H
Sbjct: 216 KFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADPILPPRSIPPMLGA-QHVQD 274
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTI---GVAD---------------EHIGFVVGRGGRN 278
H P G N ++SL + G++ ++IG V+G+GG
Sbjct: 275 LHDYPESG-----NAWPLYSSSLPVVPGGISGHPPSEELVVRVLCPFDNIGRVIGKGGGT 329
Query: 279 IMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDRLMD 336
I I Q SGAR++V D E +TIS + S+ +SM ++ V +++ D
Sbjct: 330 IKSIRQASGARVEVDDTK---RDCDECIITISSFE-SLDDLKSMAVETVLLLQEKIND 383
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 232 PHNTAAHYGPNMGGRKFQNNKDDRTNS----LTIGVADEHIGFVVGRGGRNIMEISQISG 287
P+ + G N G ++ +DD + I DE IG V+G+ G+ I I Q +
Sbjct: 7 PYGQRDYNGDNKGYKRRITEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINSIRQETR 66
Query: 288 ARIKVSDRGDFFSGTSERKVTI 309
A+IKV D F G +R +TI
Sbjct: 67 AKIKVVDP---FPGAKDRVITI 85
>gi|291400299|ref|XP_002716509.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 599
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 136/310 (43%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEAEIMKKLREAFENDMLAVNQQANLIPGLNL 368
Query: 207 TYAGVFFSGFHGM-------PYGAVPPPVPAVPHN--TAAHYGPNMGGRKFQNNKDDRTN 257
+ G+F +G + P P H+ ++ Y + G ++
Sbjct: 369 SALGIFSTGLSMLPPPAGPRGAPPTAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQE 428
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 486
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 487 KAQGRIFGKL 496
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE+ IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACASAEAEIMKKLREAFENDML 354
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 487
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 488 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 544
Query: 157 ISR 159
+ R
Sbjct: 545 VPR 547
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 487
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 488 AQGRIFGKLKEENFFN 503
>gi|449495710|ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cucumis sativus]
Length = 516
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 30/185 (16%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R E P + R + + GT +++ RA
Sbjct: 89 KINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRA 148
Query: 98 VDLVIDKLLTELHAEDQADDVGTKT--------------KLRLIVPNSSCGSIIGKAGAT 143
++L+ E+ AE AD G+ + + + +PN+ +IGK G T
Sbjct: 149 -----EQLINEVIAE--ADSGGSASTTNQAINSSQPGVEQFVMKIPNNKVALVIGKGGET 201
Query: 144 IKSFMDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
IKS S A ++I L D S +R V + G ++ A ELI +S L
Sbjct: 202 IKSIQSKSAARVQIIPLHLPPGDTS----TERSVYINGLKEQIESAKELINEVISGKRLV 257
Query: 199 SQTMT 203
S+T +
Sbjct: 258 SETTS 262
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 50/212 (23%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T ++ +PN G IIGK G TIK S A I+I+R + R V L GT ++
Sbjct: 86 TSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQV 145
Query: 182 MRALELILLKLSE-DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
RA +LI ++E D+ S + T N A
Sbjct: 146 SRAEQLINEVIAEADSGGSASTT------------------------------NQAI--- 172
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV----SDRG 296
N+ + + + + V+G+GG I I S AR+++ G
Sbjct: 173 ---------NSSQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPG 223
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
D ++ER V I+G + I +A+ +I + ++
Sbjct: 224 DT---STERSVYINGLKEQIESAKELINEVIS 252
>gi|409051686|gb|EKM61162.1| hypothetical protein PHACADRAFT_247591 [Phanerochaete carnosa
HHB-10118-sp]
Length = 326
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 131/279 (46%), Gaps = 22/279 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGK G + + + + + +S+ PG +R++ ++G+++ + +
Sbjct: 30 LRSLVSTKDAGVIIGKAGKNVAELREATAVKAGVSK---VIPGVHERVLTVTGSVEGVAK 86
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A +++++L T + +++ +RL++ ++ GS+IG++G IK+ D S A +
Sbjct: 87 AYAMIVNQLSSTSATSPVSPTPSSSQSSIRLLISHNLMGSVIGRSGLKIKAIQDSSGARM 146
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
+ L S +R+V + G+ + RA+E I L ED + + Y F
Sbjct: 147 FAQKEMLPQS----TERIVEVHGSAESIGRAIEDIGRALLED--WDRATGTVY-----FH 195
Query: 214 SGFHGMPYGAVPPPVPAVPHNTAAH-YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVV 272
G G P + A G + RT +++I + +G ++
Sbjct: 196 PGAADERSGRRPGQQSRRSNGDAPRDRGSPSPSSPSAQPSNLRTQNISI--PSDMVGCII 253
Query: 273 GRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
GR G I EI ++SG++I ++ + T ER TI G
Sbjct: 254 GRNGTKITEIRRLSGSKISIAK--EPHDETGERMFTIVG 290
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 44/199 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+S+ L G+VIG+ G I Q SGAR+ + E P +T+RI+ + G+ + I R
Sbjct: 115 IRLLISHNLMGSVIGRSGLKIKAIQDSSGARMFAQK--EMLPQSTERIVEVHGSAESIGR 172
Query: 97 AVDLVIDKLLTELHAE----------------------------DQADDVG--------- 119
A++ + LL + D D G
Sbjct: 173 AIEDIGRALLEDWDRATGTVYFHPGAADERSGRRPGQQSRRSNGDAPRDRGSPSPSSPSA 232
Query: 120 TKTKLR---LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
+ LR + +P+ G IIG+ G I S + I I++ H G +R+ T+ G
Sbjct: 233 QPSNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETG--ERMFTIVG 290
Query: 177 TLDEQMRALELILLKLSED 195
T + +AL L+ +L +
Sbjct: 291 TPEANEKALFLLYNQLESE 309
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG--------- 89
LV G++IG+ G I ++ ARI++ + PGTT+R +M+S
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMVSAKEEPDSSLP 57
Query: 90 -TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
+D +LR +ID L ++ + + G K RL+VP S GS+IGK G T+KS
Sbjct: 58 PAMDGLLRVHKRIIDGLDSD--SSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQ 115
Query: 149 DDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
+ S ++++ D + L +DR+V + G +A+ELI L
Sbjct: 116 EASTCIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHL 161
>gi|148704853|gb|EDL36800.1| mCG140771, isoform CRA_a [Mus musculus]
gi|149051190|gb|EDM03363.1| neuro-oncological ventral antigen 1, isoform CRA_d [Rattus
norvegicus]
Length = 180
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 109
Query: 96 RAVDLVIDKLLTEL 109
AV I + + E+
Sbjct: 110 NAVHGFIAEKIREM 123
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTIEALNAVHGFIAEKI 120
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIE 107
>gi|449438689|ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221280 [Cucumis sativus]
Length = 516
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 24/182 (13%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R E P + R + + GT +++ RA
Sbjct: 89 KINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRA 148
Query: 98 VDLVIDKLLTELHAEDQADDVGTKT--------------KLRLIVPNSSCGSIIGKAGAT 143
++L+ E+ AE AD G+ + + + +PN+ +IGK G T
Sbjct: 149 -----EQLINEVIAE--ADSGGSASTTNQAINSSQPGVEQFVMKIPNNKVALVIGKGGET 201
Query: 144 IKSFMDDSQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQT 201
IKS S A ++I L H G +R V + G ++ A ELI +S L S+T
Sbjct: 202 IKSIQSKSAARVQIIPL-HLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSET 260
Query: 202 MT 203
+
Sbjct: 261 TS 262
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 50/212 (23%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T ++ +PN G IIGK G TIK S A I+I+R + R V L GT ++
Sbjct: 86 TSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQV 145
Query: 182 MRALELILLKLSE-DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
RA +LI ++E D+ S + T N A
Sbjct: 146 SRAEQLINEVIAEADSGGSASTT------------------------------NQAI--- 172
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV----SDRG 296
N+ + + + + V+G+GG I I S AR+++ G
Sbjct: 173 ---------NSSQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPG 223
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
D ++ER V I+G + I +A+ +I + ++
Sbjct: 224 DT---STERSVYINGLKEQIESAKELINEVIS 252
>gi|320580877|gb|EFW95099.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 689
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 125/320 (39%), Gaps = 75/320 (23%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AGA+IGK G I + Q+ + +S+ E G DRI+ ++G +D + RA
Sbjct: 389 RMLVSRREAGAIIGKNGDNITRIREQTNVKAGVSKVIE---GCIDRILTVTGIVDNVPRA 445
Query: 98 VDLVIDKLLTELHAEDQADDVGTKT-------------------------------KLRL 126
+ + K +T+ + + A T LRL
Sbjct: 446 L-VQFAKAVTDSNVQTVASASANGTDPTSLITYNFFPLKPLCPTPAASDPFYAETLSLRL 504
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN--DRLVTLTGTLDEQMRA 184
++P+S G++IGK G+ IKS Q I + Y N +R+V + G + A
Sbjct: 505 LIPHSQMGTLIGKGGSRIKSI----QETYNIKMVASKDYLRNSTERIVEVQGAKTNLVEA 560
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG 244
L T + S +HG+ P P P P G
Sbjct: 561 LN--------------------TISRCLLSDYHGVVATIYYTPSPRQP--------PYKG 592
Query: 245 GRKF---QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
G K Q D+ S E +G ++G+ G I EI + SG I + D D G
Sbjct: 593 GSKLDPQQGTGSDKEISEKTSFPGEFVGALIGKKGSRIQEIRRTSGCTINI-DAEDNEQG 651
Query: 302 TSERKVTISGPQRSIRTAES 321
+R+ T++G S+ A S
Sbjct: 652 --QREFTLTGTTLSVDRALS 669
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 22 PVKSLSSDPT-EKPTY-----IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
P+K L P P Y +R L+ + G +IGKGGS I Q I++ S +
Sbjct: 481 PLKPLCPTPAASDPFYAETLSLRLLIPHSQMGTLIGKGGSRIKSIQETYN--IKMVASKD 538
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE---------------------DQ 114
+ +T+RI+ + G ++ A++ + LL++ H D
Sbjct: 539 YLRNSTERIVEVQGAKTNLVEALNTISRCLLSDYHGVVATIYYTPSPRQPPYKGGSKLDP 598
Query: 115 ADDVGTKTKL--RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
G+ ++ + P G++IGK G+ I+ S I I D+ R
Sbjct: 599 QQGTGSDKEISEKTSFPGEFVGALIGKKGSRIQEIRRTSGCTINIDAEDNEQ---GQREF 655
Query: 173 TLTGTLDEQMRAL 185
TLTGT RAL
Sbjct: 656 TLTGTTLSVDRAL 668
>gi|147818796|emb|CAN67284.1| hypothetical protein VITISV_021596 [Vitis vinifera]
Length = 332
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 24/172 (13%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IGKGG TI Q QSGA+IQ++R + P + R++ + GT D+I +A
Sbjct: 103 IPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIAKA--- 159
Query: 101 VIDKLLTELHAEDQADDVGTKTK----------LRLIVPNSSCGSIIGKAGATIKSFMDD 150
++L+ ++ +E +A G ++ + VPN+ G IIGK G TIK+
Sbjct: 160 --EQLINDVLSEAEAGGSGIVSRRLTGQAGSEQFVMKVPNNKVGLIIGKGGETIKNMQAR 217
Query: 151 SQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
+ A I++ L D S +R V + GT ++ A +L+ +SE L
Sbjct: 218 TGARIQVIPLHLPPGDTSM----ERTVQIDGTSEQIESAKQLVNEVISEWLL 265
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 82/208 (39%), Gaps = 44/208 (21%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T ++ +PN G IIGK G TIK S A I+++R + RLV L GT D+
Sbjct: 97 TSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQI 156
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
+A +LI LSE +G G+ V G
Sbjct: 157 AKAEQLINDVLSEAE-----------------AGGSGI-----------VSRRLTGQAGS 188
Query: 242 NMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSG 301
K NNK +G ++G+GG I + +GARI+V
Sbjct: 189 EQFVMKVPNNK---------------VGLIIGKGGETIKNMQARTGARIQVIPLHLPPGD 233
Query: 302 TS-ERKVTISGPQRSIRTAESMIMQKVA 328
TS ER V I G I +A+ ++ + ++
Sbjct: 234 TSMERTVQIDGTSEQIESAKQLVNEVIS 261
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE- 93
T R+L G++IG+GG + + + ++I++ E PG +R++ I + DE
Sbjct: 43 TVYRYLCPGRKIGSIIGRGGEIVKQLRVDTKSKIRIG---ETVPGCEERVVTIYSSSDET 99
Query: 94 ----------------ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
+ R D V+ + E+H ED + ++ +RL+VP+ G +I
Sbjct: 100 NAFDDSDTFVSPAQDALFRVHDRVVSE---EVHGEDSEE--ASQVTVRLLVPSDQIGCVI 154
Query: 138 GKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
GK G I+S +S A ++I + DH S +D LV ++G +AL I +L ++
Sbjct: 155 GKGGQIIQSIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRLHDN 214
Query: 196 TLYSQTM---TVP--YTYAGVFFSGFHGMPYGAVPPPV 228
SQ + VP Y+ G G P + P V
Sbjct: 215 PSRSQHLLASAVPTGYSSGGSLMGPTSGAPIMGLAPLV 252
>gi|397604059|gb|EJK58596.1| hypothetical protein THAOC_21266, partial [Thalassiosira oceanica]
Length = 523
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGA-RIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
G VIGKGG I D Q++SG RI + ++ P RII GT RA KL
Sbjct: 104 GRVIGKGGEMIRDLQARSGCLRIDVDQN---VPHNAPRIISYRGT-----RAKIEFAKKL 155
Query: 106 LTELHAEDQAD---DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
+ L ED + +G + R+ VP ++ G +IG+ G I+ DS A I++ DH
Sbjct: 156 VQRLCREDGNEAELPLGDASIKRVRVPANTIGKVIGRKGDMIRRLQHDSMAKIQV---DH 212
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG 222
S ++R + +TG D +A E+IL L+ + L ++ V G P+G
Sbjct: 213 SNNQGHERTIVVTGMKDAVTKAEEMILF-LTSNPLCDAAQSLAML---VGHKANSGKPWG 268
Query: 223 AVPPPVPAVPHN 234
+ PP +P+N
Sbjct: 269 SG-PPYEGLPNN 279
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 33/296 (11%)
Query: 17 KRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
KR T + S+ + T R+L G++IG GG ++++ ++I++S E
Sbjct: 25 KRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRIS---ET 81
Query: 77 FPGTTDRIIMI-SG---------TIDEILRAVDLVI---DKLLTELHAEDQADDVGTKTK 123
PG +R++ I SG T D I A D + D++L E D+ + +
Sbjct: 82 IPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQQIT 141
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH-SYYGLN-DRLVTLTGTLDEQ 181
+R++VP+ G +IGK G I++ ++ A I++ +H LN D L+ +TG
Sbjct: 142 VRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVV 201
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
+AL + +L ++ SQ + + +F SG G V P + GP
Sbjct: 202 KKALYQVAARLHDNPSRSQHQLL--SSPSIFRSG-----AGLVNPHAGTQVMGVTSLMGP 254
Query: 242 NMGGRKFQNNKDDRTNSLT-----IGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
++++ R++S+ + E++G V+G+GG I ++ Q SGA IKV
Sbjct: 255 YA---SYKSDGRSRSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKV 307
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 22/172 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
+R + GAVIGKGG I + +SGA I++ + D II +S
Sbjct: 274 VRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAA---AEGDDCIIFVSAKEAFEDQ 330
Query: 90 --TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
TID +R + +E ++ D + T RL+VP+S G +IGK G+ I
Sbjct: 331 SPTIDATMR-----LQPRSSEKTEKESGDAILTT---RLLVPSSRVGCLIGKGGSIINEM 382
Query: 148 MDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
+ ++A I++ ++ +D +V +TG + AL +L++L +T
Sbjct: 383 RNSTRASIRVLSKENLPKVASEDDEMVQITGDANVAANALLQVLMRLRANTF 434
>gi|296825084|ref|XP_002850758.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
gi|238838312|gb|EEQ27974.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
Length = 367
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 134/301 (44%), Gaps = 38/301 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G + +S+ G DR++ ++G + +
Sbjct: 50 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK---VVQGVHDRVLTVTGPLQGTSK 106
Query: 97 AVDLVIDKLLT---ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS-- 151
A +V LL ++ + GT + +RL++ ++ G+IIG+ G IK D S
Sbjct: 107 AYSIVAKSLLEGAPQMGMGGVVQNNGTHS-VRLLISHNQMGTIIGRQGLKIKYIQDASGV 165
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGV 211
+ V + L S +R+V + GT + +A+ I L +D T TV Y A V
Sbjct: 166 RMVAQKEMLPQS----TERIVEVQGTPEGIEKAIWEIGKCLIDD-WQRGTGTVLYNPA-V 219
Query: 212 FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG----------GRKFQNNKDDR------ 255
S G + P+ N+ ++ G GR+ N+ +R
Sbjct: 220 RASVGSGPGQASAAGSNPSYGGNSRSYNRTGNGADFSDHPGSYGRRGNNDNPNRGIPLVT 279
Query: 256 -----TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTIS 310
+ I + + +G ++GRGG I EI + SGARI ++ T ER TI
Sbjct: 280 EDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKA--PHDDTGERMFTIM 337
Query: 311 G 311
G
Sbjct: 338 G 338
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 147/355 (41%), Gaps = 64/355 (18%)
Query: 6 SSYVPSPDVHGKRSTAPVKSLSSDPTE-------KPTYIRFLVSNPLAGAVIGKGGSTIN 58
S Y PS + + A + S+SS+P + P ++ + + G VIGK GS I
Sbjct: 472 SLYHPSWEGKHRSDPAALASISSNPWQILAAAAVAPAFLEWKI-----GKVIGKKGSQIK 526
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMIS----GTIDEILRAVDL--VIDKLLTELHAE 112
+ ++GA I+++ + T DR ++IS G D + L V+ LL +
Sbjct: 527 KLRDETGAHIKIA---DPMNTTEDRAVLISSKNEGGSDRTCAELALLEVVTILLKDGDGA 583
Query: 113 DQADDVGTKTK-----LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH----S 163
+ +G + + RL++ S GS+IGKAGA IK+ S A +++ D S
Sbjct: 584 TPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASVRVLPSDQLPLCS 643
Query: 164 YYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHG----- 218
DRLV ++G + A+EL+ L ++ T P +F G G
Sbjct: 644 AACETDRLVQISGEVAAVQMAIELVAANLRDNPPKETVPTTPEAKTA-YFLGIDGKTGQQ 702
Query: 219 --MPYGAVPPPVPAVPHNTAAH-------YGPNMGGRKFQNNKDDRTN------------ 257
+P+ +V P + A + GP G N
Sbjct: 703 VLLPHSSVAAVYGHSPSSMALYGLQPHPLAGPAYAGGVLAQAPPLYANPAARLPPMLPKV 762
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS-------DRGDFFSGTSER 305
S + V +G ++G+GG +I + +SGA IKV+ +R F GT E+
Sbjct: 763 SAEMSVPSSVMGGLIGKGGFHISHMRSVSGATIKVNGSKESSVERTILFEGTQEQ 817
>gi|328716031|ref|XP_001944817.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 415
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 157/329 (47%), Gaps = 59/329 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ + +IG+ G + D ++QS A I ++ S T +RI+ ++G I+ I +
Sbjct: 23 IRILMGKEIL-PLIGEYGEVVRDLRNQSEATITITDS-----STPERIVTVTGNINIIQK 76
Query: 97 AVDLVIDKLLTE---LHAED-QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L I K+L + H ++ + T ++LIVP S CGS+IGK G I+ + S
Sbjct: 77 AFAL-ITKILEQNSPTHLQNSRKPSSNNSTTIKLIVPASQCGSLIGKGGVKIREIREASG 135
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV-PYTY- 208
A++ ++ L +S +R V+++GT + A+ I + + E T+ P+
Sbjct: 136 AMVNVASDLLQNS----TERTVSISGTAEAITEAIHQICIVMLETPGRGPTVAYRPFVSQ 191
Query: 209 -AGVFFSGFHGMPY---GAVPPPVPAV--------PHNTAAHYGPNM------------- 243
V G G Y G++ +PAV NT A PN+
Sbjct: 192 PGPVVLCG--GQAYTLQGSL--AIPAVGDQTASNAALNTIASIAPNLIAGSGLDPSVLAA 247
Query: 244 --------GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
GG + ++ T+ + I ++ IG ++G+GG I EI +ISGA I++S+
Sbjct: 248 LAGSQLRGGGVSSKTSQQHITHEMAI--PNDIIGCIIGKGGTKIAEIRRISGAMIRISNT 305
Query: 296 GDF-FSGTSERKVTISGPQRSIRTAESMI 323
+ SG ER +TISG ++ A+++I
Sbjct: 306 EEHEASGKMERAITISGQADAVNVAKTLI 334
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T I+ +V G++IGKGG I + + SGA + + + + +T+R + ISGT + I
Sbjct: 105 TTIKLIVPASQCGSLIGKGGVKIREIREASGAMVNV--ASDLLQNSTERTVSISGTAEAI 162
Query: 95 LRAVDLVIDKLL 106
A+ + +L
Sbjct: 163 TEAIHQICIVML 174
>gi|451847129|gb|EMD60437.1| hypothetical protein COCSADRAFT_99089 [Cochliobolus sativus ND90Pr]
Length = 364
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 127/303 (41%), Gaps = 41/303 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGK G + D + ++G R +S+ G DR++ ++G++ I +
Sbjct: 47 LRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSK---VVQGVHDRVLSVTGSLSGISK 103
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A L LL A + T +RL++ ++ G+IIG+ G IK D S +
Sbjct: 104 AYGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 163
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTV- 204
V + L S +R+V + G+ +A+ I L +D LY+ + V
Sbjct: 164 MVAQKEMLPQS----TERVVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNPAVRVQ 219
Query: 205 ------PYTYAGVFFSG----------FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
P G +G HG + PP + AA P
Sbjct: 220 PGVGPGPAANGGSAPAGGMGGRSYNRTGHGADFSDSPPAFSRRSGSDAASRPPP----PT 275
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + I + + +G ++GRGG I EI + S ARI ++ T ER T
Sbjct: 276 HTEDGEEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIAKA--PHDDTGERMFT 333
Query: 309 ISG 311
I+G
Sbjct: 334 ITG 336
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 110 HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
H ED +++ T+ + +P+ G IIG+ G+ I S A I I++ H G +
Sbjct: 276 HTED-GEEMQTQN---ISIPSDMVGCIIGRGGSKISEIRKTSNARISIAKAPHDDTG--E 329
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTL 197
R+ T+TG+ +AL L+ L + +
Sbjct: 330 RMFTITGSASANEKALYLLYENLEAEKM 357
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 11 SPDVHGKRSTAPVKSLSSDPT-----EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSG 65
SP +RS + S PT E+ + + + G +IG+GGS I++ + S
Sbjct: 255 SPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSN 314
Query: 66 ARIQLSRS-HEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
ARI ++++ H+ T +R+ I+G+ +A+ L+ + L E QA +
Sbjct: 315 ARISIAKAPHDD---TGERMFTITGSASANEKALYLLYENLEAEKMRRSQAQE 364
>gi|359495228|ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
Length = 772
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 22/167 (13%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ V N G +IGK G TI Q SGA+IQ++R + P + R + + G+++ I +A
Sbjct: 179 KMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSLENINKA 238
Query: 98 VDLVID-----------KLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
L+ D L+ A QA VG ++++ VPN G IIGK G TIKS
Sbjct: 239 EKLIKDVIAEADAGGSPSLVARGFATAQA--VGAAEQVQIQVPNEKVGLIIGKGGETIKS 296
Query: 147 FMDDSQAVIK-----ISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
S A I+ + D S +R V +TG + A E+I
Sbjct: 297 LQTRSGARIQLIPQHLPEGDQS----KERTVRVTGDKKQIEMAREMI 339
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 50/207 (24%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ VPN+ G +IGKAG TI+ +S A I+I+R D Y + R V L G+L+ +
Sbjct: 179 KMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSAS-RPVELIGSLENINK 237
Query: 184 ALELILLKLSE-DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
A +LI ++E D S ++ GF TA G
Sbjct: 238 AEKLIKDVIAEADAGGSPSLVA---------RGFA-----------------TAQAVG-- 269
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR----GDF 298
+ I V +E +G ++G+GG I + SGARI++ + GD
Sbjct: 270 ------------AAEQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQHLPEGDQ 317
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQ 325
+ ER V ++G ++ I A MI +
Sbjct: 318 ---SKERTVRVTGDKKQIEMAREMIKE 341
>gi|347842448|emb|CCD57020.1| similar to KH domain RNA binding protein [Botryotinia fuckeliana]
Length = 488
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++++ A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVS---DYQKGAVERILTVSGVVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E E +D LRL++P+ GSIIGK G IK + S A +
Sbjct: 184 KAFGLIIRTLNNE-PLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARL 242
Query: 156 KISRLDHSYYGLN-DRLVTLTGTLD 179
S SY L+ +R + + G D
Sbjct: 243 NAS---DSYLPLSTERSLVVLGVAD 264
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGKGG I + Q SGAR+ S S
Sbjct: 190 IRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARLNASDS-- 247
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
+ P +T+R +++ G D + A V L +L
Sbjct: 248 YLPLSTERSLVVLGVADAVHIATYYVGSTLFEQL 281
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 415 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNS----NERLVTITGTAECNQM 470
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 471 ALYMLYSRLESE 482
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 410 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTAE 466
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 467 CNQMALYMLYSRLESERH 484
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I + ++ +G ++G+GG I EI Q+SG+ IK+++ D ++ER VTI+G + A
Sbjct: 416 IFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTAECNQMAL 472
Query: 321 SMIMQKV 327
M+ ++
Sbjct: 473 YMLYSRL 479
>gi|358387038|gb|EHK24633.1| hypothetical protein TRIVIDRAFT_54511 [Trichoderma virens Gv29-8]
Length = 369
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 44/313 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +VS+ AG +IGKGG + D + ++G + +S+ G DR++ I+G D I R
Sbjct: 49 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK---VVQGVHDRVLTITGGCDAISR 105
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A +V LL A + + ++L++ ++ G+IIG+ G IK D S +
Sbjct: 106 AYAIVARALLEGAPAVGMGGVIQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVR 165
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTM-TV 204
V + L S +R+V + GT + RA+ I L +D LY+ + T
Sbjct: 166 MVAQKEMLPQS----TERIVEVQGTPEGIQRAIWEISKCLVDDWQRGTGTVLYNPVVRTQ 221
Query: 205 P------------------YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGR 246
P Y V +G P + AA+ GP
Sbjct: 222 PSGSGSLGGSGYNGGGRGDYGSPRVMRTGNGADFSNGGSRPFSRRSDSDAANRGPPT--- 278
Query: 247 KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERK 306
+N ++ +T +++I + +G ++GRGG I +I + SGARI ++ T ER
Sbjct: 279 HDENGEEIQTQNISIPA--DMVGCIIGRGGSKISDIRKTSGARISIAKA--PHDETGERM 334
Query: 307 VTISGPQRSIRTA 319
TI G ++ +A
Sbjct: 335 FTIMGTAKANESA 347
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRS-HEFFPGTTDRIIMISGTIDEILRAVDLVID 103
+ G +IG+GGS I+D + SGARI ++++ H+ T +R+ I GT A+ L+ +
Sbjct: 297 MVGCIIGRGGSKISDIRKTSGARISIAKAPHDE---TGERMFTIMGTAKANESALFLLYE 353
Query: 104 KLLTELHAEDQADD 117
L E Q D
Sbjct: 354 NLEAEKMRRSQMQD 367
>gi|361123942|gb|EHK96076.1| putative RNA-binding protein rnc1 [Glarea lozoyensis 74030]
Length = 376
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 133/326 (40%), Gaps = 38/326 (11%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P+ + E +R +VS+ AG +IGKGG + D + ++G + +S+ G
Sbjct: 39 PLPKTDEEYAESQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGCKAGVSK---VVQGVH 95
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGK 139
DR++ I+G + I +A +V LL V ++L++ ++ G+IIG+
Sbjct: 96 DRVLTIAGGCEAISKAYAIVAKALLEGAPQMGMGGVVAQSGSHPIKLLISHNQMGTIIGR 155
Query: 140 AGATIKSFMDDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
G IK D S + V + L S +R+V + GT + +A+ I L +D
Sbjct: 156 QGLKIKHIQDVSGVRMVAQKEMLPQS----TERIVEVQGTPEGIQKAVWEICKCLVDD-W 210
Query: 198 YSQTMTV---PYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG-----PNMGGRKFQ 249
T TV P +G G P +N G N R +
Sbjct: 211 QRGTGTVLYNPVVRTQPGAAGGMGGGQALGGSPRGDYGNNRVMRTGNGADFSNEAPRSYN 270
Query: 250 NNKDD----------------RTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS 293
N + D + I + + +G ++GR G I EI + SGARI ++
Sbjct: 271 NRRSDSDAAQRGPPTHDENGEELQTQNISIPSDMVGCIIGRAGSKISEIRKTSGARISIA 330
Query: 294 DRGDFFSGTSERKVTISGPQRSIRTA 319
T ER TI G Q++ TA
Sbjct: 331 K--SPHDETGERMFTIMGSQKANETA 354
>gi|357621941|gb|EHJ73587.1| hypothetical protein KGM_22691 [Danaus plexippus]
Length = 431
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G + F+ +SGA+I +S +RI+ ++G I +A L+ K
Sbjct: 7 GSIIGKKGEIVKRFREESGAKINISDGS-----CPERIVTVTGNTSSIFKAFTLICKKF- 60
Query: 107 TELHAEDQADDVGTKT--KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV---IKISRLD 161
E ++ G++ LRLIVP S CGS+IGK G+ IK D + + + L
Sbjct: 61 EEWCSQFNEGGGGSRAPITLRLIVPASQCGSLIGKGGSKIKEIRDVTGRLYVHVASEMLP 120
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+S +R VT++GT D + + I + E + T+PY
Sbjct: 121 NS----TERAVTISGTCDAITQCIYHICCVMLESP--PKGATIPY 159
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+N S + V +E IG ++G+GG I EI QISGA I++S+ + G+++R +T
Sbjct: 270 RNQPATNQQSHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGSTDRTIT 329
Query: 309 ISGPQRSIRTAESMIMQKV 327
ISG S+ A+ +I V
Sbjct: 330 ISGNPDSVALAQYLINMSV 348
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V N L G +IGKGG+ I + + SGA I++S E G+TDR I ISG D + A L
Sbjct: 284 VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGSTDRTITISGNPDSVALAQYL 343
Query: 101 V 101
+
Sbjct: 344 I 344
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ P +R +V G++IGKGGS I + + +G R+ + + E P +T+R + ISGT
Sbjct: 74 SRAPITLRLIVPASQCGSLIGKGGSKIKEIRDVTG-RLYVHVASEMLPNSTERAVTISGT 132
Query: 91 IDEILRAVDLVIDKLL 106
D I + + + +L
Sbjct: 133 CDAITQCIYHICCVML 148
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 282 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGSTDRTITISGNPDSVALAQ 341
Query: 186 ELI 188
LI
Sbjct: 342 YLI 344
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,233,086,651
Number of Sequences: 23463169
Number of extensions: 225334582
Number of successful extensions: 625860
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 1561
Number of HSP's that attempted gapping in prelim test: 601642
Number of HSP's gapped (non-prelim): 15627
length of query: 336
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 193
effective length of database: 9,003,962,200
effective search space: 1737764704600
effective search space used: 1737764704600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)