BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019747
(336 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 115/201 (57%), Gaps = 18/201 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 50 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 108
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 109 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 167
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED +
Sbjct: 168 TVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 226
Query: 203 TVPYT--YAGVFFSGFHGMPY 221
+ Y V S G PY
Sbjct: 227 NISYANVTGPVANSNPTGFPY 247
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 389 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 448
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 449 ITGTPAATQAAQYLITQRITY 469
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 110
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG-AVPPPVPAVPHNTAAHYGPN 242
I K+ E MP A PV + T +
Sbjct: 111 VHGFIAEKIRE------------------------MPQNVAKTEPVSILQPQTTVN---- 142
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + I V + G ++G+GG + I + SGA +++S + D +
Sbjct: 143 ----------PDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGIN-L 191
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 192 QERVVTVSGEPEQNRKAVELIIQKI 216
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 388 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 447
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 448 TITGTPAATQAAQYLITQRITYE 470
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 33 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 92
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 93 GTTERVCLIQGTIEALNAVHGFIAEKI 119
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 394 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 453
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 454 AATQAAQYLITQRIT 468
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 16/184 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 168
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED +
Sbjct: 169 TVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Query: 203 TVPY 206
+ Y
Sbjct: 228 NISY 231
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 390 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 449
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 450 ITGTPAATQAAQYLITQRITY 470
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 40/205 (19%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG-AVPPPVPAVPHNTAAHYGPN 242
I K+ E MP A PV + T +
Sbjct: 112 VHGFIAEKIRE------------------------MPQNVAKTEPVSILQPQTTVN---- 143
Query: 243 MGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGT 302
DR + I V + G ++G+GG + I + SGA +++S + D +
Sbjct: 144 ----------PDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGIN-L 192
Query: 303 SERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG R A +I+QK+
Sbjct: 193 QERVVTVSGEPEQNRKAVELIIQKI 217
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 389 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 448
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 449 TITGTPAATQAAQYLITQRITYE 471
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTVEALNAVHGFIAEKI 120
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 395 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 454
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 455 AATQAAQYLITQRIT 469
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I V + +G ++G+GG+ ++E +++GARI++S +G+F GT R+VTI+G + + A+
Sbjct: 411 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 470
Query: 321 SMIMQKVAY 329
+I Q+V Y
Sbjct: 471 YLISQRVTY 479
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
I K+ E Q MT P + P T
Sbjct: 95 VHSFIAEKVRE---IPQAMTKPEVVNIL-------------------QPQTTM------- 125
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
DR + V + G ++G+GG + + + SGA +++S + + +
Sbjct: 126 --------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQ 176
Query: 304 ERKVTISGPQRSIRTAESMIMQKV 327
ER VT+SG + A S I+QKV
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKV 200
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P + K N ++ L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 17 PEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER + G ++ S I +KV
Sbjct: 77 GTTERVCLVQGTAEALNAVHSFIAEKV 103
Score = 38.5 bits (88), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 454 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 481
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 116/224 (51%), Gaps = 40/224 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 272
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT+ E +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EALN 110
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNTAAH 238
A+ + + + + T P + P V P +P+ P T +
Sbjct: 111 AVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTTKSS 161
Query: 239 YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDF 298
M R N + I V + G ++G+GG + I + SGA +++S + D
Sbjct: 162 PSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG 213
Query: 299 FSGTSERKVTISGPQRSIRTAESMIMQKV 327
+ ER VT+SG R A +I+QK+
Sbjct: 214 IN-LQERVVTVSGEPEQNRKAVELIIQKI 241
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 414 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 473
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 474 ITGTPAATQAAQYLITQRITY 494
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
P G K N +D L + + G ++G+GG+ I+++ + +GA IK+S DF+
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV 327
GT+ER I G ++ I +K+
Sbjct: 94 GTTERVCLIQGTIEALNAVHGFIAEKI 120
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 419 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 479 AATQAAQYLITQRIT 493
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 217 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 335 -GSSERQITITGTPANISLAQYLI 357
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 229 PAVPHNTAA--------HYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIM 280
P +PH+T H+G M K + T ++ + + + +G ++G+ G +
Sbjct: 11 PILPHSTLGTLSHHPELHFGGKME-SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVK 69
Query: 281 EISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
++ + SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 70 KMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 51/324 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 216
Query: 209 AGVFFSG--------------------FHGMPYGAVP-PPV----PAVPHNT----AAHY 239
V F+G H + P PP+ PA P ++
Sbjct: 217 TPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 240 GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFF 299
N+ G+ + ++ + + ++ IG ++GR G I EI Q+SGA+IK+++ +
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 300 SGTSERKVTISGPQRSIRTAESMI 323
G+SER++TI+G +I A+ +I
Sbjct: 335 -GSSERQITITGTPANISLAQYLI 357
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 231 VPHNTAA----HYGPNMGGR---KFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEIS 283
+PH+T + H P G R K + T ++ + + + +G ++G+ G + ++
Sbjct: 13 LPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMR 72
Query: 284 QISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+ SGARI +S+ ER VTI+GP +I A +MI K
Sbjct: 73 EESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 187 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 348
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 260 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 316
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 317 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 187 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 348
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 260 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 316
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 317 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 187 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 348
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 260 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 316
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 317 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFH-------GMPYGA----VPP-------------PVPAVPHNTAA---- 237
+ V +G G P+ PP P+ N A
Sbjct: 187 PASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQS 246
Query: 238 HYGPNMGGRKFQ----------------NNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
H+ GG F + T+ LTI + IG ++GR G NI E
Sbjct: 247 HFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTI--PNNLIGCIIGRQGANINE 304
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
I Q+SGA+IK+++ G+S R+VTI+G SI A+ +I +++
Sbjct: 305 IRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLS 348
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 260 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 316
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 317 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P + H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGMDPSTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N + P + +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 ANGGSVSRPPV--------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YGAV P ++H P + +T+S V
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 140/300 (46%), Gaps = 27/300 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGGRKFQN-NKDDRTNSLTIGV 263
V S G YG V P + H P + +T+S V
Sbjct: 189 GTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLV 248
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
++ IG V+GR G I EI Q+SGA IK+ ++ + G ER VTI+G SI A+ +I
Sbjct: 249 PNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLI 305
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 53/199 (26%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
T+TG+ A+ +I KL ED A P
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDEDLC--------------------------------AAP 91
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
N GG N +L + + G ++G+ G I EI + +GA+++V
Sbjct: 92 AN---------GG-----NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Query: 293 SDRGDFFSGTSERKVTISG 311
+ GD ++ER VT+SG
Sbjct: 138 A--GDLLPNSTERAVTVSG 154
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----GT-----KTKLR- 125
I+ V + +L T L + +Q V GT TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 43/227 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR---SHEFFPGTTDRIIMISGTID 92
+++ L+ + AG++IGKGG TI Q ++GA I+LS+ S +F+PGTT+R+ +I GT+
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTV- 109
Query: 93 EILRAVDLVIDKLLTEL----------------------------------HAEDQADDV 118
E L AV I + + E+ +D +
Sbjct: 110 EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPM 169
Query: 119 GTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
T ++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G
Sbjct: 170 TTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSG 228
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
++ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 229 EPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 275
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS---YYGLNDRLVTLTGTLDE 180
L++++P+ + GSIIGK G TI ++ A IK+S+L S Y G +R+ + GT+ E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTV-E 110
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPP-----PVPAVPHNT 235
+ A+ + + + + T P + P V P +P+ P T
Sbjct: 111 ALNAVHGFIAEKIREMPQNVAKTEPVSIL---------QPQTTVNPDRIKQTLPSSPTTT 161
Query: 236 AAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDR 295
+ M R N + I V + G ++G+GG + + + SGA +++S +
Sbjct: 162 KSSPSDPM--------TTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK 213
Query: 296 GDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
D + ER VT+SG R A +I+QK+
Sbjct: 214 PDGIN-LQERVVTVSGEPEQNRKAVELIIQKI 244
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%)
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVT 308
+ + D + + I V + +G ++G+GG+ ++E +++GARI++S +G+F GT RKVT
Sbjct: 417 EKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVT 476
Query: 309 ISGPQRSIRTAESMIMQKVAY 329
I+G + + A+ +I Q++ Y
Sbjct: 477 ITGTPAATQAAQYLITQRITY 497
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 416 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 475
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 476 TITGTPAATQAAQYLITQRITYE 498
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 162 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQ 220
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 221 ERVVTVSGEPEQNRKAVELIIQKI 244
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARI---KVSDRGD 297
P G K N +D L + + G ++G+GG+ I+++ + +GA I K+S D
Sbjct: 34 PEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKD 93
Query: 298 FFSGTSERKVTISGPQRSIRTAESMIMQKV 327
F+ GT+ER I G ++ I +K+
Sbjct: 94 FYPGTTERVCLIQGTVEALNAVHGFIAEKI 123
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 422 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 481
Query: 179 DEQMRALELILLKLS 193
A LI +++
Sbjct: 482 AATQAAQYLITQRIT 496
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 157/348 (45%), Gaps = 73/348 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG--------------------------FHGMPYG--------AVPPPVPAVP 232
+ + V F+G G P A+P P
Sbjct: 187 SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKL 246
Query: 233 HNTA---AHYGPNMGGRKFQN--------------NKDDRTNSLTIGVADEHIGFVVGRG 275
H A +H+ G F + +T S + + ++ IG ++GR
Sbjct: 247 HQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQ 306
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
G I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 307 GAKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 351
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 282 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 338
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 339 GSAASISLAQYLINVRLSSE 358
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 282 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 338
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 339 GSAASISLAQYLINVRLSSET 359
Score = 38.5 bits (88), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 157/347 (45%), Gaps = 74/347 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG--------------------------FHGMPYG--------AVPPPVPAVPHN 234
+ V F+G G P A+P P H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 235 TA---AHY---------------GPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGG 276
A +H+ P + G + +T S + + ++ IG ++GR G
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 304
Query: 277 RNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
I EI Q+SGA+IK+++ G+++R+VTI+G SI A+ +I
Sbjct: 305 AKINEIRQMSGAQIKIANP---VEGSTDRQVTITGSAASISLAQYLI 348
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 335
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 336 GSAASISLAQYLINVRLSSE 355
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 335
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 336 GSAASISLAQYLINVRLSSET 356
Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 266 EHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
+ +G ++G+ G ++ ++ + SGARI +S+ ER +T++GP +I A +MI+
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISE-----GNCPERIITLAGPTNAIFKAFAMIID 77
Query: 326 KV 327
K+
Sbjct: 78 KL 79
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 136/310 (43%), Gaps = 23/310 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+S AG +IGK G + + +S + + ++++ P DR++ ISG ++ ++R
Sbjct: 96 LRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKA---VPNVHDRVLTISGPLENVVR 152
Query: 97 AVDLVIDKLLTELHAED-QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A +ID D D T KLRL++ +S GSIIG+ G IK D +
Sbjct: 153 AYRFIIDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRM 212
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
S+ L S +R V + GT+D A+ I L +D TV Y
Sbjct: 213 IASKDMLPQS----TERTVEIHGTVDNLHAAIWEIGKCLIDD-WERGAGTVFYNPVSRLT 267
Query: 214 SGFHGMPYGAVPPPV--PAVPHNTAAHYGP----NMGGRKFQNNK----DDRTNSLTIGV 263
+ A P V PA P T+ P + G + F + + I +
Sbjct: 268 QPLPSLASTASPQQVSPPAAPSTTSGEAIPENFVSYGAQVFPATQMPFLQQPKVTQNISI 327
Query: 264 ADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMI 323
+ +G ++GRGG I EI + SG++I ++ + T ER TI+G A ++
Sbjct: 328 PADMVGCIIGRGGSKISEIRRTSGSKISIAK--EPHDETGERMFTITGTHEENEKALFLL 385
Query: 324 MQKVAYASDR 333
Q++ DR
Sbjct: 386 YQQLEMEKDR 395
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 147/315 (46%), Gaps = 36/315 (11%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APVK P + P +R LV GA+IGK G+TI + Q+ ++I + R G
Sbjct: 187 APVKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GA 239
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I I T + A ++++ + E AD+V L+++ N+ G +IGK
Sbjct: 240 AEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIGKE 295
Query: 141 GATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE----- 194
G +K D++ I IS L D + Y +R +T+ G+++ +A + I+ K+ E
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTLYN-PERTITVKGSIENCCKAEQEIMKKVREAYEND 354
Query: 195 -DTLYSQTMTVP-YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNK 252
+ Q+ +P A V G AVPPP +V + AA Y M +
Sbjct: 355 VAAMSLQSHLIPGLNLAAV---GLFPASSNAVPPPPSSV--SGAAPYSSFMPPEQ----- 404
Query: 253 DDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGP 312
++ + + + +G ++G+ G++I ++S+ + A IK++ S R V I+GP
Sbjct: 405 ----ETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVVITGP 458
Query: 313 QRSIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 459 PEAQFKAQGRIYGKL 473
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISIHSTPEGCSA 255
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A ++IL + ++ ++T VP AH
Sbjct: 256 ACKMILEIMQKEAKDTKTAD--------------------------EVPLKILAH----- 284
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 285 ------NN---------------FVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNP 323
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV AY +D
Sbjct: 324 ERTITVKGSIENCCKAEQEIMKKVREAYEND 354
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 6 SSYVPSP--DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQ 63
S+ VP P V G AP S P E+ T F+ + + GA+IGK G I
Sbjct: 380 SNAVPPPPSSVSG---AAPYSSFM--PPEQETVHVFIPAQAV-GAIIGKKGQHIKQLSRF 433
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK 123
+ A I+++ P + R+++I+G + +A + KL E + ++V +T
Sbjct: 434 ASASIKIAPPE--TPDSKVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETH 490
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+R VP S+ G +IGK G T+ + + A + + R
Sbjct: 491 IR--VPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 524
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 45/204 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S + +R I + G+I+ +
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCK 338
Query: 97 AVDLVIDKLLTELHAEDQAD--------------DVG----------------------- 119
A ++ K+ E + D A VG
Sbjct: 339 AEQEIMKKV-REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAPYS 397
Query: 120 -----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
+ + + +P + G+IIGK G IK + A IKI+ + + R+V +
Sbjct: 398 SFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVVI 455
Query: 175 TGTLDEQMRALELILLKLSEDTLY 198
TG + Q +A I KL E+ +
Sbjct: 456 TGPPEAQFKAQGRIYGKLKEENFF 479
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
T+IR S AG VIGKGG T+N+ Q+ + A + + R P +++I+
Sbjct: 489 THIRVPAS--AAGRVIGKGGKTVNELQNLTAAEVVVPRDQ--TPDENEQVIV 536
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 152/346 (43%), Gaps = 34/346 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 153 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 212
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 213 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 268
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 269 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 325
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 326 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 385
Query: 231 VP--HNTAAH-------YGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIME 281
P H A H Y + G ++ ++++ + + +G ++G+ G +I +
Sbjct: 386 SPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQ 445
Query: 282 ISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 446 LARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 489
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 246
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ VP AH G
Sbjct: 247 ACRMILEIMQKEADETKLAEE-----------------------------VPLKILAHNG 277
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 278 --------------------------FVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 311
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + AE IM+K+ A+ +D L
Sbjct: 312 YNPERTITVRGTIEACANAEIEIMKKLREAFENDML 347
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 423 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 480
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 481 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 537
Query: 157 ISR 159
+ R
Sbjct: 538 VPR 540
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 425 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 482
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 483 GRIFGKLKEENFFN 496
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 154/342 (45%), Gaps = 38/342 (11%)
Query: 4 NESSYVPSPDVHGKRSTAP-------VKSLSSDPT-EKPTYIRFLVSNPLAGAVIGKGGS 55
+E++ +P V G+R P SL + P + +R LV GA+IGK G+
Sbjct: 156 DETAAADAPAVGGRRGFNPRGPPRQGSPSLGARPKLQSDVPLRLLVPTQFVGAIIGKEGA 215
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TI + Q+ ++I + R G ++ I + T + A +++ + E A D
Sbjct: 216 TIRNITKQTHSKIDIHRKENA--GAAEKPITVHSTPEGCSSACRNIMEIMQKE--AID-- 269
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTL 174
+ + L+++ N+ G +IGK G +K D+ I IS L D + Y +R +T+
Sbjct: 270 TKITEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYN-PERTITV 328
Query: 175 TGTLDEQMRALELILLKLSED------TLYSQTMTVPYTYAGVFFSG---FHGMPYGAVP 225
GTLD +A E I+ K+ E ++ Q+ +P G+ + F G G +
Sbjct: 329 KGTLDACAKAEEEIMKKVRESYENDVAAMHLQSNLIP----GLNLNALGLFPGAASGGIS 384
Query: 226 PPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQI 285
P V + P G G + F + T L I +G ++G+ G++I ++S+
Sbjct: 385 PSVVSGPPP-----GAQAGYQSFGAQMESETVHLFIPAL--AVGAIIGKQGQHIKQLSRF 437
Query: 286 SGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+GA IK++ +R V ISGP + A+ I K+
Sbjct: 438 AGASIKIAPADGI--DAKQRMVIISGPPEAQFKAQGRIFGKL 477
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 62/214 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT---LDE 180
LRL+VP G+IIGK GATI++ + + I I R +++ G ++ +T+ T
Sbjct: 197 LRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENA--GAAEKPITVHSTPEGCSS 254
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K + DT ++ + P+ + HN
Sbjct: 255 ACRNIMEIMQKEAIDTKITEEI------------------------PLKILAHNN----- 285
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I Q + +I +S D
Sbjct: 286 --------------------------FVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTL 319
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV +Y +D
Sbjct: 320 YNPERTITVKGTLDACAKAEEEIMKKVRESYEND 353
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + R+++ISG + +A + KL
Sbjct: 421 GAIIGKQGQHIKQLSRFAGASIKIAPADGI--DAKQRMVIISGPPEAQFKAQGRIFGKLK 478
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
E + G K +++L VP+ + G +IGK G T+ + + A + + R D
Sbjct: 479 EE-------NFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPR-DQ 530
Query: 163 SYYGLNDRLVTLTG 176
+ + +V +TG
Sbjct: 531 TPDENDQVVVKITG 544
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
AG VIGKGG T+N+ Q+ + A + + R P D++++
Sbjct: 502 AGRVIGKGGKTVNELQNLTSAEVVVPRDQT--PDENDQVVV 540
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 231 VPHNTAAHYGPNMGGRK-FQNNKDDRTNSLTIG--------------VADEHIGFVVGRG 275
+P TAA P +GGR+ F R S ++G V + +G ++G+
Sbjct: 154 IPDETAAADAPAVGGRRGFNPRGPPRQGSPSLGARPKLQSDVPLRLLVPTQFVGAIIGKE 213
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
G I I++ + ++I + + + +G +E+ +T+ +A IM+
Sbjct: 214 GATIRNITKQTHSKIDIHRKEN--AGAAEKPITVHSTPEGCSSACRNIME 261
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G ++ +A E I+ K+ E ++ Q +P
Sbjct: 312 ISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEH 267
G+F P +PPP P Y +F+ ++ T ++ + +
Sbjct: 372 ALGLF------PPTSGMPPPTSGPPSAMTPPYP------QFEQSE---TETVHLFIPALS 416
Query: 268 IGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K+
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKI 474
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 78/207 (37%), Gaps = 48/207 (23%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S E +R I + G ++ +
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAK 338
Query: 97 AVDLVIDKLLTELHAED------------------------------------------- 113
A + ++ K+ E + D
Sbjct: 339 AEEEIMKKI-RESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPY 397
Query: 114 -QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
Q + T+T + L +P S G+IIGK G IK + A IKI+ + + R+V
Sbjct: 398 PQFEQSETET-VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKV--RMV 454
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
+TG + Q +A I K+ E+ S
Sbjct: 455 IITGPPEAQFKAQGRIYGKIKEENFVS 481
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM-ISGTIDEILRAVDLVIDK 104
AG VIGKGG T+N+ Q+ S A + + R P D++++ I+G + I +
Sbjct: 499 AGRVIGKGGKTVNELQNLSSAEVVVPRDQT--PDENDQVVVKITGHF-YACQVAQRKIQE 555
Query: 105 LLTELHAEDQ 114
+LT++ Q
Sbjct: 556 ILTQVKQHQQ 565
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 141/319 (44%), Gaps = 67/319 (21%)
Query: 39 FLVSNPLAGA--VIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DE 93
F V PL VIGKGGSTI + SG+ I+++ S G + +I+++ T D
Sbjct: 314 FKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKC-GDDECVIIVTATESPDDM 372
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
AV+ V+ LL E ++ A++V K++L+V + G +IGK+G+ I + A
Sbjct: 373 KSMAVEAVL--LLQEYINDEDAENV----KMQLLVSSKVIGCVIGKSGSVINEIRKRTNA 426
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL---------------- 197
I IS+ G D LV ++G + AL I+L+L ED L
Sbjct: 427 NICISK------GKKDDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVATRKPPARTD 480
Query: 198 ----YSQTMTVPYTYAGVF-----FSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF 248
S + YT SGFHG YG+ P N GP GR
Sbjct: 481 NCSFLSGSSNAGYTLPSFMSSMASTSGFHG--YGSFP-----AGDNVLGSTGPYSYGRL- 532
Query: 249 QNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVS----DRGDFFSGTSE 304
+++L I + + V+G+GG N+ I +ISGA I++S GD +
Sbjct: 533 -----PSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIA---- 583
Query: 305 RKVTISGPQRSIRTAESMI 323
+SG +R AE+++
Sbjct: 584 ---LLSGTLEQMRCAENLV 599
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 82/325 (25%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE---- 93
R L + G VIGK G IN + + A+I++ + G + R+I I ++ E
Sbjct: 39 RILCPIDVVGGVIGKSGKVINAIRHNTKAKIKV---FDQLHGCSQRVITIYCSVKEKQEE 95
Query: 94 ----------ILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSII 137
+ A D ++ K+ + A D+ ++ T + RL+VP S S+I
Sbjct: 96 IGFTKSENEPLCCAQDALL-KVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLI 154
Query: 138 GKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRALELIL 189
GKAG IK ++A +K+ D H D +V ++G ++ + + A+ I+
Sbjct: 155 GKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIM 214
Query: 190 LKL--------------------------------------SEDTLYSQTMTVPYTYAGV 211
K+ ++D + Q VP + +
Sbjct: 215 YKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNAL 274
Query: 212 FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE--HIG 269
S F G A PVP + +G GG R+ L V +I
Sbjct: 275 SVSDFQGYAETAA-NPVPVFASSLPVTHG--FGG-------SSRSEELVFKVLCPLCNIM 324
Query: 270 FVVGRGGRNIMEISQISGARIKVSD 294
V+G+GG I I + SG+ I+V+D
Sbjct: 325 RVIGKGGSTIKRIREASGSCIEVND 349
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
+D + ++ LVS+ + G VIGK GS IN+ + ++ A I +S+ G D ++ +
Sbjct: 388 NDEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISK------GKKDDLVEV 441
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
SG + + A+ ++ +L ++ + D V T+ K N S S AG T+ SF
Sbjct: 442 SGEVSSVRDALIQIVLRLREDVLGD--KDSVATR-KPPARTDNCSFLSGSSNAGYTLPSF 498
Query: 148 M 148
M
Sbjct: 499 M 499
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
+ +G P H+ H P + + + + +G ++G+
Sbjct: 367 YPHHQFGPFP-------HH---HSYPEQ-------------EIVNLFIPTQAVGAIIGKK 403
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
G +I ++++ +GA IK++ SER V I+GP + A+ I K+
Sbjct: 404 GAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFKAQGRIFGKL 453
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKL-----------------LTELHAEDQ------ADDVGTKTKLRLIVPNSSC 133
A ++ KL + L+ Q + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACASAEIEIMKKLREAFENDML 354
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 31/318 (9%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P + S +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 182 RQMSPGSGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 240
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + A ++++ + E AD+V L+++ N+ G +I
Sbjct: 241 -GAAEKPISIHSTPEGCSAACRMILEIMNQEAKDTKTADEV----PLKVLAHNNFVGRLI 295
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE--- 194
GK G +K D+ I IS L +R +T+ G+++ A + I+ K+ E
Sbjct: 296 GKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCLAEQEIMKKVREAYD 355
Query: 195 ---DTLYSQTMTVPYTYAGV--FFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQ 249
+ QT +P G F MP A+ VP P YGP MG
Sbjct: 356 NDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVPGPP------YGP-MGA---- 404
Query: 250 NNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTI 309
++ + + + +G ++G+ G++I ++S+ +GA IK++ + R V +
Sbjct: 405 ----SEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAP--AEAPDSKMRMVIV 458
Query: 310 SGPQRSIRTAESMIMQKV 327
+GP + A+ I K+
Sbjct: 459 TGPPEAQFKAQGRIYGKL 476
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 54/209 (25%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 201 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKPISIHSTPEGCSA 258
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A +IL ++++ ++T VP AH
Sbjct: 259 ACRMILEIMNQEAKDTKTAD--------------------------EVPLKVLAH----- 287
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 288 ------NN---------------FVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNP 326
Query: 304 ERKVTISGPQRSIRTAESMIMQKVAYASD 332
ER +T+ G + AE IM+KV A D
Sbjct: 327 ERTITVKGSIEACCLAEQEIMKKVREAYD 355
Score = 38.1 bits (87), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P + R+++++G + +A + KL
Sbjct: 420 GALIGKKGQHIKQLSRFAGASIKIAPAE--APDSKMRMVIVTGPPEAQFKAQGRIYGKLK 477
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + G K +++L V ++ G +IGK G T+ + + A + + R
Sbjct: 478 EE-------NFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEVVVPR 527
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 78/203 (38%), Gaps = 43/203 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID---- 92
++ L N G +IGK G + + + +I +S + +R I + G+I+
Sbjct: 282 LKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCL 341
Query: 93 ---EILRAVDLVIDKLLTELHAEDQ---ADDVGT-------------------------- 120
EI++ V D + ++ + ++G
Sbjct: 342 AEQEIMKKVREAYDNDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVPGPPYGP 401
Query: 121 -----KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+ + + +P + G++IGK G IK + A IKI+ + + R+V +T
Sbjct: 402 MGASEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKM--RMVIVT 459
Query: 176 GTLDEQMRALELILLKLSEDTLY 198
G + Q +A I KL E+ +
Sbjct: 460 GPPEAQFKAQGRIYGKLKEENFF 482
Score = 34.7 bits (78), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
T+I+ V+ AG VIGKGG T+N+ Q+ + A + + R E P D++I+
Sbjct: 492 THIK--VAAAAAGRVIGKGGKTVNELQNLTAAEVVVPR--EQTPDEHDQVIV 539
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 16/310 (5%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQASPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRES-- 350
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTN 257
Y + G + G PP P + +F+ ++ T
Sbjct: 351 YENDIAS-MNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQSE---TE 406
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
++ + + +G ++G+ G++I ++S+ +GA IK++ R V I+GP +
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQF 464
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 465 KAQGRIYGKI 474
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V + +R VP+ + G +IGK G T+ S A + + R D +
Sbjct: 476 EENFVSPK-EEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQSLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 48/207 (23%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S E +R I + G+++ +
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAK 338
Query: 97 AVDLVIDKLLTELHAED------------------------------------------- 113
A + ++ K+ E + D
Sbjct: 339 AEEEIMKKI-RESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY 397
Query: 114 -QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
Q + T+T + L +P S G+IIGK G IK + A IKI+ + + R+V
Sbjct: 398 PQFEQSETET-VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKV--RMV 454
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
+TG + Q +A I K+ E+ S
Sbjct: 455 IITGPPEAQFKAQGRIYGKIKEENFVS 481
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
AG VIGKGG T+N+ QS S A + + R P D++++
Sbjct: 499 AGRVIGKGGKTVNELQSLSSAEVVVPRDQT--PDENDQVVV 537
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D ++R L A ++G G+TI+ +S++ ARI +S + G +RI+
Sbjct: 59 SPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNN---IRGVPERIVY 115
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ GT D++ +A +++ LL E ED +D+ + + L++P+ G IIGK G+ ++
Sbjct: 116 VRGTCDDVAKAYGMIVRALLEEHGNEDNGEDI--EISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D S A K+ + NDR++T+ G D
Sbjct: 174 IEDLSAA--KLFASPNQLLLSNDRILTINGVPD 204
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 55/213 (25%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D D+V + LR++ I+G GATI ++ A I IS ++ G+ +R+V
Sbjct: 58 DSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINIS---NNIRGVPERIV 114
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
+ GT D+ +A +I+ L E+ HG
Sbjct: 115 YVRGTCDDVAKAYGMIVRALLEE---------------------HGN------------- 140
Query: 233 HNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKV 292
++N +D S+ + + +G ++G+ G + EI +S A++
Sbjct: 141 ----------------EDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFA 184
Query: 293 SDRGDFFSGTSERKVTISGPQRSIRTAESMIMQ 325
S S ++R +TI+G +I A I Q
Sbjct: 185 SPNQLLLS--NDRILTINGVPDAIHIATFYISQ 215
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 117/297 (39%), Gaps = 55/297 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I L+ + L G +IGK GS + + + S A++ S + + DRI+ I+G D I
Sbjct: 151 INLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLL--SNDRILTINGVPDAIHI 208
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A I + L E +V SI + +D SQ
Sbjct: 209 AT-FYISQTLLNFQMESPQKNVKR--------------SIYYQPTQFNSVLIDHSQPNTI 253
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP-YTYAGVF-FS 214
+ +H Y+ +D+L++ + L +S L +M P YT A V +
Sbjct: 254 FHQRNHQYHP-SDKLLSYKPNKN----------LPISSTLL---SMATPQYTTASVANAT 299
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNM----GGRKFQNNKDDRTNSLTIGVADEHIGF 270
F P +P N GP + G N I + ++ +G
Sbjct: 300 AFQ--PNFVIP--------NVTVLDGPVISPAPGNHLLMNFVQQE-----IFIDEKFVGN 344
Query: 271 VVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
V+G+ G++I + + +G I + D G+SER++TI G + + A +I K+
Sbjct: 345 VIGKDGKHINSVKESTGCSIIIQDP---VEGSSERRLTIRGTFMASQAAIMLISNKI 398
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 135/298 (45%), Gaps = 28/298 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVPYTYA 209
IS L D + Y +R +T+ G ++ RA + I+ K+ E + Q+ +P
Sbjct: 312 ISSLQDLTLYN-PERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIP---- 366
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIG 269
G+ + P + P P AA YG M + + + + + +G
Sbjct: 367 GLNLAAVGLFPASSSAVPPPPSSVTGAAPYGSFM--------QAPEQEMVQVFIPAQAVG 418
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
++G+ G++I ++S+ + A IK++ S R V I+GP + A+ I K+
Sbjct: 419 AIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVVITGPPEAQFKAQGRIYGKL 474
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSS 255
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A ++IL + ++ ++T VP AH
Sbjct: 256 ACKMILEIMHKEAKDTKTAD--------------------------EVPLKILAH----- 284
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 285 ------NN---------------FVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNP 323
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV AY +D
Sbjct: 324 ERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP S P ++ ++ + GA+IGK G I + A I+++ P +
Sbjct: 394 APYGSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPDS 449
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 450 KVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKG 506
Query: 141 GATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 507 GKTVNELQNLTAAEVVVPR 525
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 75/205 (36%), Gaps = 46/205 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S + +R I + G I+ R
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCR 338
Query: 97 AVDLVIDKLLTELHAEDQAD---------------------------------------- 116
A ++ K+ E + D A
Sbjct: 339 AEQEIMKKV-REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYG 397
Query: 117 ---DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
+ +++ +P + G+IIGK G IK + A IKI+ + + R+V
Sbjct: 398 SFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVV 455
Query: 174 LTGTLDEQMRALELILLKLSEDTLY 198
+TG + Q +A I KL E+ +
Sbjct: 456 ITGPPEAQFKAQGRIYGKLKEENFF 480
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
T+IR S AG VIGKGG T+N+ Q+ + A + + R P D++I+
Sbjct: 490 THIRVPAS--AAGRVIGKGGKTVNELQNLTAAEVVVPRDQ--TPDENDQVIV 537
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 140/314 (44%), Gaps = 33/314 (10%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP K P + P +R LV GA+IGK G+TI + Q+ ++I + R G
Sbjct: 187 APAKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGA 239
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I + T + A ++++ + E AD+V L+++ N+ G +IGK
Sbjct: 240 AEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKE 295
Query: 141 GATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE----- 194
G +K D++ I IS L D + Y +R +T+ G ++ RA + I+ K+ E
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTLYN-PERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Query: 195 -DTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD 253
+ Q+ +P G+ + P + P P AA Y M +
Sbjct: 355 VAAMSLQSHLIP----GLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFM--------QA 402
Query: 254 DRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQ 313
+ + + + +G ++G+ G++I ++S+ + A IK++ S R V I+GP
Sbjct: 403 PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVVITGPP 460
Query: 314 RSIRTAESMIMQKV 327
+ A+ I K+
Sbjct: 461 EAQFKAQGRIYGKL 474
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSS 255
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A ++IL + ++ ++T VP AH
Sbjct: 256 ACKMILEIMHKEAKDTKTAD--------------------------EVPLKILAH----- 284
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 285 ------NN---------------FVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNP 323
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV AY +D
Sbjct: 324 ERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP S P ++ ++ + GA+IGK G I + A I+++ P +
Sbjct: 394 APYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPDS 449
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 450 KVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKG 506
Query: 141 GATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 507 GKTVNELQNLTAAEVVVPR 525
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 75/205 (36%), Gaps = 46/205 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S + +R I + G I+ R
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCR 338
Query: 97 AVDLVIDKLLTELHAEDQAD---------------------------------------- 116
A ++ K+ E + D A
Sbjct: 339 AEQEIMKKV-REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYS 397
Query: 117 ---DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
+ +++ +P + G+IIGK G IK + A IKI+ + + R+V
Sbjct: 398 SFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVV 455
Query: 174 LTGTLDEQMRALELILLKLSEDTLY 198
+TG + Q +A I KL E+ +
Sbjct: 456 ITGPPEAQFKAQGRIYGKLKEENFF 480
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
T+IR S AG VIGKGG T+N+ Q+ + A + + R P D++I+
Sbjct: 490 THIRVPAS--AAGRVIGKGGKTVNELQNLTAAEVVVPRDQ--TPDENDQVIV 537
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 133/301 (44%), Gaps = 31/301 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 207 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN--AGAAEKPITIHSTPEGCSA 264
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 265 ACKIIMEI----MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 320
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D + Y +R +T+ G+++ +A E ++ K+ E + Q +P
Sbjct: 321 ISPLQDLTLYN-PERTITVKGSIETCAKAEEEVMKKIRESYENDIAAMNLQAHLIPGLNL 379
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADE 266
G+F GMP + P T+A Y P F + T L I
Sbjct: 380 NALGLFPPSSSGMPPPSAGVSSP----TTSASYPP------FGQQPESETVHLFIPALA- 428
Query: 267 HIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQK 326
+G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+ I K
Sbjct: 429 -VGAIIGKQGQHIKQLSRFAGASIKIAPAEG--PDAKLRMVIITGPPEAQFKAQGRIYGK 485
Query: 327 V 327
+
Sbjct: 486 L 486
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 62/214 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK GATI++ +Q+ I I R +++ G ++ +T+ T +
Sbjct: 207 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GAAEKPITIHSTPEGCSA 264
Query: 184 ALEL---ILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
A ++ I+ K ++DT +++ + P+ + HN
Sbjct: 265 ACKIIMEIMQKEAQDTKFTEEI------------------------PLKILAHNN----- 295
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I Q + +I +S D
Sbjct: 296 --------------------------FVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTL 329
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE +M+K+ +Y +D
Sbjct: 330 YNPERTITVKGSIETCAKAEEEVMKKIRESYEND 363
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + KL
Sbjct: 430 GAIIGKQGQHIKQLSRFAGASIKIAPAE--GPDAKLRMVIITGPPEAQFKAQGRIYGKLK 487
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + G K +++L VP+ + G +IGK G T+ + + A + + R
Sbjct: 488 EE-------NFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 537
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK G IK + A IKI+ + L R+V +TG + Q +
Sbjct: 420 VHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKL--RMVIITGPPEAQFK 477
Query: 184 ALELILLKLSEDTLY 198
A I KL E+ +
Sbjct: 478 AQGRIYGKLKEENFF 492
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
AG VIGKGG T+N+ Q+ + A + + R P D++++
Sbjct: 511 AGRVIGKGGKTVNELQNLTSAEVVVPRDQT--PDENDQVVV 549
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 28/298 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVPYTYA 209
IS L D + Y +R +T+ G ++ RA + I+ K+ E + Q+ +P
Sbjct: 312 ISSLQDLTLYN-PERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIP---- 366
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIG 269
G+ + P + P P AA Y M + + + + + +G
Sbjct: 367 GLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFM--------QAPEQEMVQVFIPAQAVG 418
Query: 270 FVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKV 327
++G+ G++I ++S+ + A IK++ S R V I+GP + A+ I K+
Sbjct: 419 AIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVIITGPPEAQFKAQGRIYGKL 474
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSS 255
Query: 184 ALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
A ++IL + ++ ++T VP AH
Sbjct: 256 ACKMILEIMHKEAKDTKTAD--------------------------EVPLKILAH----- 284
Query: 244 GGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTS 303
NN +G ++G+ GRN+ ++ Q + +I +S D
Sbjct: 285 ------NN---------------FVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNP 323
Query: 304 ERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+KV AY +D
Sbjct: 324 ERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP S P ++ ++ + GA+IGK G I + A I+++ P +
Sbjct: 394 APYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPDS 449
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 450 KVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKG 506
Query: 141 GATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 507 GKTVNELQNLTAAEVVVPR 525
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 75/205 (36%), Gaps = 46/205 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S + +R I + G I+ R
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCR 338
Query: 97 AVDLVIDKLLTELHAEDQAD---------------------------------------- 116
A ++ K+ E + D A
Sbjct: 339 AEQEIMKKV-REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYS 397
Query: 117 ---DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
+ +++ +P + G+IIGK G IK + A IKI+ + + R+V
Sbjct: 398 SFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVI 455
Query: 174 LTGTLDEQMRALELILLKLSEDTLY 198
+TG + Q +A I KL E+ +
Sbjct: 456 ITGPPEAQFKAQGRIYGKLKEENFF 480
Score = 35.4 bits (80), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
T+IR S AG VIGKGG T+N+ Q+ + A + + R P D++I+
Sbjct: 490 THIRVPAS--AAGRVIGKGGKTVNELQNLTAAEVVVPRDQ--TPDENDQVIV 537
>sp|Q756R8|HEK2_ASHGO Heterogeneous nuclear rnp K-like protein 2 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HEK2 PE=3 SV=1
Length = 316
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 140/322 (43%), Gaps = 82/322 (25%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
A ++G+GG+TI++ + +G +I +S + +DR++ ++G+ID + ++ V+ K+
Sbjct: 44 AARILGRGGNTIDNIRKANGVKIGISTKEK---SCSDRLLEVTGSIDAVANSLADVV-KV 99
Query: 106 LT-----ELHAE--------------------DQADD---VGTKTKLRLIVPNSSCGSII 137
LT E AE D+A+D V LRLIV NS SII
Sbjct: 100 LTADDTNEEDAEPEPEQHIFKHLNFILPPPSPDEAEDPMKVKQIGNLRLIVTNSQVSSII 159
Query: 138 GKAGATIKSFMD--DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
G AG+ IK +D S+ V+ + L S DR++ + G + ++ I L +D
Sbjct: 160 GTAGSKIKKLIDTHSSKLVVSKTFLPDS----QDRILEIQGFPNSIANCIKDISQTLIKD 215
Query: 196 TLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDR 255
+ Y P H+ H
Sbjct: 216 DVLDTKEKRYY----------------------PHSKHSKDIHV---------------- 237
Query: 256 TNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG-PQR 314
+ T+ + E++G ++G GG I + + + +I V+ + +ER+ TI+G Q+
Sbjct: 238 --TATVAIPAEYVGALLGHGGNRIANLRKYTRTKITVAQEPN---QNNEREFTITGNDQK 292
Query: 315 SIRTAESMIMQKVAYASDRLMD 336
S++ A++MIM+ + +R ++
Sbjct: 293 SVKLAQNMIMKNLGTEKERRLE 314
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 2 ETNESSYVPSPDVH-GKRSTAPVKSLSSDPTEKPTYI------RFLVSNPLAGAVIGKGG 54
+TNE P P+ H K + S D E P + R +V+N ++IG G
Sbjct: 104 DTNEEDAEPEPEQHIFKHLNFILPPPSPDEAEDPMKVKQIGNLRLIVTNSQVSSIIGTAG 163
Query: 55 STINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVD-----LVIDKLLTEL 109
S I +++ +S++ F P + DRI+ I G + I + L+ D +L
Sbjct: 164 SKIKKLIDTHSSKLVVSKT--FLPDSQDRILEIQGFPNSIANCIKDISQTLIKDDVLDTK 221
Query: 110 ------HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS 163
H++ D T T + +P G+++G G I + ++ I +++ +
Sbjct: 222 EKRYYPHSKHSKDIHVTAT---VAIPAEYVGALLGHGGNRIANLRKYTRTKITVAQEPNQ 278
Query: 164 YYGLNDRLVTLTGTLDEQMRALELILLK 191
N+R T+TG + ++ + +++K
Sbjct: 279 N---NEREFTITGNDQKSVKLAQNMIMK 303
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 137/310 (44%), Gaps = 28/310 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNL 368
Query: 207 TYAGVFFSGFHGMPYGAVPPPV-------PAVPHN--TAAHYGPNMGGRKFQNNKDDRTN 257
+ G+F +G + A P P H+ ++ Y + G ++
Sbjct: 369 SALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQE 428
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
+ + + + +G ++G+ G +I ++++ +GA IK++ SER V I+GP +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQF 486
Query: 318 TAESMIMQKV 327
A+ I K+
Sbjct: 487 KAQGRIFGKL 496
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 62/216 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD---E 180
LR++VP G+IIGK G TIK+ +Q+ + I R ++S G ++ VT+ T + E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS--GAAEKPVTIHATPEGTSE 253
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
R + I+ K +++T ++ +P AH G
Sbjct: 254 ACRMILEIMQKEADETKLAEE-----------------------------IPLKILAHNG 284
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I +G +I +S D
Sbjct: 285 --------------------------LVGRLIGKEGRNLKKIEHETGTKITISSLQDLSI 318
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASDRL 334
ER +T+ G + +AE IM+K+ A+ +D L
Sbjct: 319 YNPERTITVKGTVEACASAEIEIMKKLREAFENDML 354
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 487
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 488 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 544
Query: 157 ISR 159
+ R
Sbjct: 545 VPR 547
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 487
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 488 AQGRIFGKLKEENFFN 503
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 33/307 (10%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
TE P +R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T
Sbjct: 204 TEVP--LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN--AGAAEKPITIHST 259
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ A ++++ + E Q + L+++ N+ G +IGK G +K D
Sbjct: 260 PEGCSAACKIIMEI----MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQD 315
Query: 151 SQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMT 203
+ I IS L D + Y +R +T+ G+++ +A E I+ K+ E + Q
Sbjct: 316 TDTKITISPLQDLTLYN-PERTITVKGSIEPCAKAEEEIMKKIRESYENDIAAMNLQAHL 374
Query: 204 VPYTYAGVFFSG---FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLT 260
+P G+ + F G PP V ++ Y P F + T L
Sbjct: 375 IP----GLNLNALGLFPSSSSGMPPPSVGVPSPTSSTSYPP------FGQQPESETVHLF 424
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
I +G ++G+ G++I ++S+ +GA IK++ R V I+GP + A+
Sbjct: 425 IPALA--VGAIIGKQGQHIKQLSRFAGASIKIAPAEG--PDAKLRMVIITGPPEAQFKAQ 480
Query: 321 SMIMQKV 327
I K+
Sbjct: 481 GRIYGKL 487
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 92/218 (42%), Gaps = 62/218 (28%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
T+ LR++VP G+IIGK GATI++ +Q+ I I R +++ G ++ +T+ T +
Sbjct: 204 TEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GAAEKPITIHSTPE 261
Query: 180 EQMRALELIL---LKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTA 236
A ++I+ K ++DT +++ + P+ + HN
Sbjct: 262 GCSAACKIIMEIMQKEAQDTKFTEEI------------------------PLKILAHNN- 296
Query: 237 AHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRG 296
+G ++G+ GRN+ +I Q + +I +S
Sbjct: 297 ------------------------------FVGRLIGKEGRNLKKIEQDTDTKITISPLQ 326
Query: 297 DFFSGTSERKVTISGPQRSIRTAESMIMQKV--AYASD 332
D ER +T+ G AE IM+K+ +Y +D
Sbjct: 327 DLTLYNPERTITVKGSIEPCAKAEEEIMKKIRESYEND 364
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + KL
Sbjct: 431 GAIIGKQGQHIKQLSRFAGASIKIAPAE--GPDAKLRMVIITGPPEAQFKAQGRIYGKLK 488
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + ++V +T ++ VP+ + G +IGK G T+ + + A + + R D +
Sbjct: 489 EE-NFFGPKEEVKLETHIK--VPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR-DQTPDE 544
Query: 167 LNDRLVTLTG 176
++ +V +TG
Sbjct: 545 NDEVVVKITG 554
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK G IK + A IKI+ + L R+V +TG + Q +
Sbjct: 421 VHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKL--RMVIITGPPEAQFK 478
Query: 184 ALELILLKLSEDTLY 198
A I KL E+ +
Sbjct: 479 AQGRIYGKLKEENFF 493
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
AG VIGKGG T+N+ Q+ + A + + R P D +++
Sbjct: 512 AGRVIGKGGKTVNELQNLTSAEVVVPRDQT--PDENDEVVV 550
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 42/272 (15%)
Query: 2 ETNESSYVPSPDVHGKRSTAPVKSLS----SDPTEKPTYIRFLVSNPLAGAVIGKGGSTI 57
E E ++ + + +GKR ++ S T++ +R L+ + AGAVIGKGG I
Sbjct: 4 EQQEETFT-NTETNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNI 62
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
++ A + + S +RI+ IS + I + +I L H + D
Sbjct: 63 KALRTDYNASVSVPDSS-----GPERILSISADTETIGEILKKIIPTLEEYQHYKGSDFD 117
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLT 175
+LRL++ S G IIG GA IK +++Q IK+ + HS DR+V +
Sbjct: 118 C----ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS----TDRVVLIG 169
Query: 176 GTLDEQMRALELILLKLSED-----------TLYSQTMTVPYTYAG--VFFSGFHGMPYG 222
G D + +++IL +SE Y +T Y Y G + F G P G
Sbjct: 170 GKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET----YDYGGFTMMFDDRRGRPVG 225
Query: 223 AVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDD 254
P PN GGR ++ D
Sbjct: 226 -----FPMRGRGGFDRMPPNRGGRPMPPSRRD 252
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L
Sbjct: 358 IPKDLAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNAQYL 414
Query: 101 V 101
+
Sbjct: 415 L 415
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 355 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 411
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFF 213
L+ + + Y+G FF
Sbjct: 412 QYLLQNSVKQ-------------YSGKFF 427
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG+ I +I SGA IK+ + G+ +R +TI+G Q I+ A+ ++ V
Sbjct: 364 GSIIGKGGQRIKQIRHESGASIKIDEP---LEGSEDRIITITGTQDQIQNAQYLLQNSVK 420
Query: 329 YASDRLM 335
S +
Sbjct: 421 QYSGKFF 427
>sp|C5DIR2|HEK2_LACTC Heterogeneous nuclear rnp K-like protein 2 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=HEK2 PE=3 SV=1
Length = 285
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 132/326 (40%), Gaps = 82/326 (25%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS A +IG G TI + S +I +S HE G +DRI+ SG+ + A
Sbjct: 13 RVLVSLKEAARIIGAQGMTIQKIRESSKVKIGIS-PHER--GCSDRILSCSGSAQGVANA 69
Query: 98 VDLVIDKL-----------------------LTELHAEDQADDVGTKTKLRLIVPNSSCG 134
+ V++ L TE+ + +G LRLIV NS
Sbjct: 70 IGDVVEVLNQDDSEPETHSYKPLNFILPAPSATEIQDPESVKRIGN---LRLIVSNSQVS 126
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL-DEQMRALELILLKLS 193
SIIG G+ IKS ++ +G+ ++V L D Q R +E+
Sbjct: 127 SIIGTQGSRIKSLIEK--------------HGV--KVVASKNFLPDSQDRVVEI------ 164
Query: 194 EDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKD 253
G P GA+ + + AA P+ + + + K
Sbjct: 165 -----------------------QGFP-GAIASCLVDISEILAAEPKPSHEKQYYPHTKS 200
Query: 254 DRTNSLT--IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
S+T + + E++G ++GRGG + + + + ++ VSD D + R TI+G
Sbjct: 201 QEEGSVTKDVAIPVEYVGALLGRGGNRVSSLRKYTKTKVIVSDEPD---EENNRVFTITG 257
Query: 312 -PQRSIRTAESMIMQKVAYASDRLMD 336
Q S++ AE+M+++ + R D
Sbjct: 258 NNQNSVKLAETMLLKNLETEKQRRED 283
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
+R +VSN ++IG GS I + G ++ S++ F P + DR++ I G
Sbjct: 116 LRLIVSNSQVSSIIGTQGSRIKSLIEKHGVKVVASKN--FLPDSQDRVVEIQGFPGAIAS 173
Query: 90 ---TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
I EIL A + H + Q + TK + +P G+++G+ G + S
Sbjct: 174 CLVDISEILAAEPKPSHEKQYYPHTKSQEEGSVTKD---VAIPVEYVGALLGRGGNRVSS 230
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
++ + +S N+R+ T+TG ++ E +LLK
Sbjct: 231 LRKYTKTKVIVSDEPDEE---NNRVFTITGNNQNSVKLAETMLLK 272
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 136/316 (43%), Gaps = 16/316 (5%)
Query: 16 GKRSTAPVKSLSSDPTEKPTY---IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
G+R S S+ +KP +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 175 GQRGPPRQGSPSATTRQKPQSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHR 234
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSS 132
G ++ I I T + A ++++ + E Q + L+++ N+
Sbjct: 235 KEN--AGAAEKPITIHSTPEGCSTACKIIMEI----MQKEAQDTKFTEEIPLKILAHNNF 288
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
G +IGK G +K D+ I IS L D + Y +R +T+ G+++ +A E I+ K
Sbjct: 289 VGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYN-PERTITVKGSIETCAKAEEEIMKK 347
Query: 192 LSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNN 251
+ E Y + G + G PP +P +
Sbjct: 348 IRES--YENDIAA-MNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFG 404
Query: 252 KDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISG 311
+ + ++ + + +G ++G+ G++I ++S+ +GA IK++ R V I+G
Sbjct: 405 QQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEG--PDAKLRMVIITG 462
Query: 312 PQRSIRTAESMIMQKV 327
P + A+ I K+
Sbjct: 463 PPEAQFKAQGRIYGKL 478
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 62/214 (28%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK GATI++ +Q+ I I R +++ G ++ +T+ T +
Sbjct: 199 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GAAEKPITIHSTPEGCST 256
Query: 184 ALELIL---LKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
A ++I+ K ++DT +++ + P+ + HN
Sbjct: 257 ACKIIMEIMQKEAQDTKFTEEI------------------------PLKILAHNN----- 287
Query: 241 PNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFS 300
+G ++G+ GRN+ +I Q + +I +S D
Sbjct: 288 --------------------------FVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTL 321
Query: 301 GTSERKVTISGPQRSIRTAESMIMQKV--AYASD 332
ER +T+ G + AE IM+K+ +Y +D
Sbjct: 322 YNPERTITVKGSIETCAKAEEEIMKKIRESYEND 355
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + KL
Sbjct: 422 GAIIGKQGQHIKQLSRFAGASIKIAPAE--GPDAKLRMVIITGPPEAQFKAQGRIYGKLK 479
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + G K +++L VP+ + G +IGK G T+ + + A + + R
Sbjct: 480 EE-------NFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 529
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK G IK + A IKI+ + L R+V +TG + Q +
Sbjct: 412 VHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKL--RMVIITGPPEAQFK 469
Query: 184 ALELILLKLSEDTLY 198
A I KL E+ +
Sbjct: 470 AQGRIYGKLKEENFF 484
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
AG VIGKGG T+N+ Q+ + A + + R P D++++
Sbjct: 503 AGRVIGKGGKTVNELQNLTSAEVVVPRDQT--PDENDQVVV 541
>sp|P38199|HEK2_YEAST Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=HEK2 PE=1
SV=1
Length = 381
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 142/340 (41%), Gaps = 75/340 (22%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ PT R L+S A +IG GSTI+ ++ + +I +S E PG
Sbjct: 33 APVVGTTAQPT---INHRLLLSLKEAAKIIGTKGSTISRIRAANAVKIGIS---EKVPGC 86
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL--------------------------------LTE 108
+DRI+ +G + + A+ ++D L E
Sbjct: 87 SDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDE 146
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
+ Q +D+G +RLIV NS SIIGKAGATIKS ++ +KI +
Sbjct: 147 IRDLQQLEDIGY---VRLIVANSHISSIIGKAGATIKSLINKHG--VKIVASKDFLPASD 201
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPV 228
+R++ + G ++ +L+++SE L + V ++ +F + + P
Sbjct: 202 ERIIEIQGFPG----SITNVLIEISEIIL--SDVDVRFSTERSYFP---HLKKSSGEPTS 252
Query: 229 PAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
P+ NT + + + + ++G ++GRG I + +
Sbjct: 253 PSTSSNT----------------------RIELKIPELYVGAIIGRGMNRIKNLKTFTKT 290
Query: 289 RIKVSDRGDFFSGTSERKVTISGP-QRSIRTAESMIMQKV 327
I V + D + RK I+ ++++ AESM+++ +
Sbjct: 291 NIVVERKDDDDKDENFRKFIITSKFPKNVKLAESMLLKNL 330
>sp|A6ZKR5|HEK2_YEAS7 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain YJM789) GN=HEK2 PE=3 SV=1
Length = 381
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 142/340 (41%), Gaps = 75/340 (22%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ PT R L+S A +IG GSTI+ ++ + +I +S E PG
Sbjct: 33 APVVGTTAQPT---INHRLLLSLKEAAKIIGTKGSTISRIRAANAVKIGIS---EKVPGC 86
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL--------------------------------LTE 108
+DRI+ +G + + A+ ++D L E
Sbjct: 87 SDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDE 146
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
+ Q +D+G +RLIV NS SIIGKAGATIKS ++ +KI +
Sbjct: 147 IRDLQQLEDIGY---VRLIVANSHISSIIGKAGATIKSLINKHG--VKIVASKDFLPASD 201
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPV 228
+R++ + G ++ +L+++SE L + V ++ +F + + P
Sbjct: 202 ERIIEIQGFPG----SITNVLIEISEIIL--SDVDVRFSTERSYFP---HLKKSSGEPTS 252
Query: 229 PAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
P+ NT + + + + ++G ++GRG I + +
Sbjct: 253 PSTSSNT----------------------RIELKIPELYVGAIIGRGMNRIKNLKTFTKT 290
Query: 289 RIKVSDRGDFFSGTSERKVTISGP-QRSIRTAESMIMQKV 327
I V + D + RK I+ ++++ AESM+++ +
Sbjct: 291 NIVVERKDDDDKDENFRKFIITSKFPKNVKLAESMLLKNL 330
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 119/308 (38%), Gaps = 58/308 (18%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T L+ G VIG+GG TI Q ++G ++ + + P D+ + I+G ++
Sbjct: 163 TIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPL-PTGADKPLRITGDAFKV 221
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTKT---------KLRLIVPNSSCGSIIGKAGATIK 145
+A ++V++ + +DQAD G + + + VP + G +IG+ G IK
Sbjct: 222 QQAREMVLEII----REKDQADFRGVRGDFNSRMGGGSIEVSVPRFAVGIVIGRNGEMIK 277
Query: 146 SFMDDSQAVIKISRLDHSYYGLN-DRLVTLTGTLDEQMRAL----ELILLKLSEDTLYSQ 200
+D+ I+ D G++ +R + G D A ELIL D
Sbjct: 278 KIQNDAGVRIQFKPDD----GISPERAAQVMGPPDRCQHAAHIISELILTAQERDGFGGL 333
Query: 201 TMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLT 260
+S G P G +T
Sbjct: 334 AAARGRGRGRGDWS--VGAPGG---------------------------------VQEIT 358
Query: 261 IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAE 320
V + G V+G+GG NI I+Q SGA +++ S + R+ TI G + I A
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVAR 418
Query: 321 SMIMQKVA 328
+I +KV
Sbjct: 419 QLIDEKVG 426
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 118/298 (39%), Gaps = 55/298 (18%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT---IDEIL 95
F V + + G +IG+GG I+ Q++SG +IQ++ P +R +++GT I++
Sbjct: 82 FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP---ERPCVLTGTPESIEQAK 138
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
R + ++D+ + D T +++P S G +IG+ G TIK + + V
Sbjct: 139 RLLGQIVDRCRNGPGFHNDIDS--NSTIQEILIPASKVGLVIGRGGETIKQLQERT-GVK 195
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+ D D+ + +TG + +A E++L + E F G
Sbjct: 196 MVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKDQAD-------------FRG 242
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRG 275
G + MGG S+ + V +G V+GR
Sbjct: 243 VRG-------------------DFNSRMGG-----------GSIEVSVPRFAVGIVIGRN 272
Query: 276 GRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVAYASDR 333
G I +I +G RI+ + ER + GP + A +I + + A +R
Sbjct: 273 GEMIKKIQNDAGVRIQFKPDDGI---SPERAAQVMGPPDRCQHAAHIISELILTAQER 327
>sp|C8Z3W4|HEK2_YEAS8 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain Lalvin EC1118 / Prise de mousse)
GN=HEK2 PE=3 SV=1
Length = 381
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 143/340 (42%), Gaps = 75/340 (22%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ PT R L+S A +IG GSTI+ ++ + +I +S E PG
Sbjct: 33 APVVGTTAQPT---INHRLLLSLKEAAKIIGTKGSTISRIRAANSVKIGIS---EKVPGC 86
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL--------------------------------LTE 108
+DRI+ +G + + A+ ++D L E
Sbjct: 87 SDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDE 146
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
+ Q +D+G +RLIV NS SIIGKAGATIKS ++ + +KI +
Sbjct: 147 IRDLQQLEDIGY---VRLIVANSHISSIIGKAGATIKSLIN--KHGVKIVASKDFLPASD 201
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPV 228
+R++ + G ++ +L+++SE L + V ++ +F + + P
Sbjct: 202 ERIIEIQGFPG----SITNVLIEISEIIL--SDVDVRFSTERSYFP---HLKKSSGEPTS 252
Query: 229 PAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
P+ NT + + + + ++G ++GRG I + +
Sbjct: 253 PSTSSNT----------------------RIELKIPELYVGAIIGRGMNRIKNLKTFTKT 290
Query: 289 RIKVSDRGDFFSGTSERKVTISGP-QRSIRTAESMIMQKV 327
I V + D + RK I+ ++++ AESM+++ +
Sbjct: 291 NIVVERKDDDDKDENFRKFIITSKFPKNVKLAESMLLKNL 330
>sp|C7GND0|HEK2_YEAS2 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain JAY291) GN=HEK2 PE=3 SV=1
Length = 381
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 143/340 (42%), Gaps = 75/340 (22%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ PT R L+S A +IG GSTI+ ++ + +I +S E PG
Sbjct: 33 APVVGTTAQPT---INHRLLLSLKEAAKIIGTKGSTISRIRAANSVKIGIS---EKVPGC 86
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL--------------------------------LTE 108
+DRI+ +G + + A+ ++D L E
Sbjct: 87 SDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDE 146
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
+ Q +D+G +RLIV NS SIIGKAGATIKS ++ + +KI +
Sbjct: 147 IRDLQQLEDIGY---VRLIVANSHISSIIGKAGATIKSLIN--KHGVKIVASKDFLPASD 201
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPV 228
+R++ + G ++ +L+++SE L + V ++ +F + + P
Sbjct: 202 ERIIEIQGFPG----SITNVLIEISEIIL--SDVDVRFSTERSYFP---HLKKSSGEPTS 252
Query: 229 PAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
P+ NT + + + + ++G ++GRG I + +
Sbjct: 253 PSTSSNT----------------------RIELKIPELYVGAIIGRGMNRIKNLKTFTKT 290
Query: 289 RIKVSDRGDFFSGTSERKVTISGP-QRSIRTAESMIMQKV 327
I V + D + RK I+ ++++ AESM+++ +
Sbjct: 291 NIVVERKDDDDKDENFRKFIITSKFPKNVKLAESMLLKNL 330
>sp|B3LNH0|HEK2_YEAS1 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=HEK2 PE=3 SV=1
Length = 381
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 142/340 (41%), Gaps = 75/340 (22%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ PT R L+S A +IG GSTI+ ++ + +I +S E PG
Sbjct: 33 APVVGTTAQPT---INHRLLLSLKEAAKIIGTKGSTISRIRAANSVKIGIS---EKVPGC 86
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL--------------------------------LTE 108
+DRI+ +G + + A+ ++D L E
Sbjct: 87 SDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDE 146
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
+ Q +D+G +RLIV NS SIIGKAGATIKS ++ +KI +
Sbjct: 147 IRDLQQLEDIGY---VRLIVANSHISSIIGKAGATIKSLINKHG--VKIVASKDFLPASD 201
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPV 228
+R++ + G ++ +L+++SE L + V ++ +F + + P
Sbjct: 202 ERIIEIQGFPG----SITNVLIEISEIIL--SDVDVRFSTERSYFP---HLKKSSGEPTS 252
Query: 229 PAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGA 288
P+ NT + + + + ++G ++GRG I + +
Sbjct: 253 PSTSSNT----------------------RIELKIPELYVGAIIGRGMNRIKNLKTFTKT 290
Query: 289 RIKVSDRGDFFSGTSERKVTISGP-QRSIRTAESMIMQKV 327
I V + D + RK I+ ++++ AESM+++ +
Sbjct: 291 NIVVERKDDDDKDENFRKFIITSKFPKNVKLAESMLLKNL 330
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGTIDEILR 96
RF V G VIG+ G I Q+ +G RIQ GTT DRI I+G D
Sbjct: 280 RFAV-----GIVIGRNGEMIKKIQNDAGVRIQFKPDD----GTTPDRIAQITGPPDRCQH 330
Query: 97 AVDLVIDKLLTELHAEDQADDV------------------GTKTKLRLIVPNSSCGSIIG 138
A +++ D LL + A + G + IVP G IIG
Sbjct: 331 AAEIITD-LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIG 389
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
K G TIKS S A I++ R N +L T+ GT + A +LI K+
Sbjct: 390 KGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 443
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 64/292 (21%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL--- 95
+ V + + G +IG+GG I+ Q +SG +IQ++ P +R M++GT + +
Sbjct: 101 YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPESVQSAK 157
Query: 96 RAVDLVIDK--LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
R +D +++K H D G + +++P S G +IGK G TIK + +A
Sbjct: 158 RLLDQIVEKGRPAPGFH---HGDGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQE--RA 211
Query: 154 VIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
+K+ + D D+ + +TG + +A E++L + + + +
Sbjct: 212 GVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRN--------- 262
Query: 213 FSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVV 272
YG +GG + + + + +G V+
Sbjct: 263 -------------------------EYGSRIGGNE----------GIDVPIPRFAVGIVI 287
Query: 273 GRGGRNIMEISQISGARIKVS-DRGDFFSGTSERKVTISGPQRSIRTAESMI 323
GR G I +I +G RI+ D G T +R I+GP + A +I
Sbjct: 288 GRNGEMIKKIQNDAGVRIQFKPDDGT----TPDRIAQITGPPDRCQHAAEII 335
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVS-DRGDFFSGTSERKVTISGPQRSIRTAES 321
V D +GF++GRGG I I Q SG +I+++ D G G ER ++G S+++A+
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG----GLPERSCMLTGTPESVQSAKR 158
Query: 322 MIMQKV 327
++ Q V
Sbjct: 159 LLDQIV 164
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I ISQ SGARI++ + + + TI G + I A +I +K+
Sbjct: 385 GLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIG 444
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 53/199 (26%)
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALEL 187
VP+ G IIG+ G I +S I+I+ GL +R LTGT + A L
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIA---PDSGGLPERSCMLTGTPESVQSAKRL 159
Query: 188 ILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRK 247
+ D + + P GFH
Sbjct: 160 L------DQIVEKGRPAP---------GFH------------------------------ 174
Query: 248 FQNNKDDRTNSLT-IGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERK 306
+ D N++ I + G V+G+GG I ++ + +G ++ + G +G +++
Sbjct: 175 ---HGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTG-ADKP 230
Query: 307 VTISGPQRSIRTAESMIMQ 325
+ I+G ++ A+ M+++
Sbjct: 231 LRITGDPYKVQQAKEMVLE 249
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGTIDEILR 96
RF V G VIG+ G I Q+ +G RIQ GTT DRI I+G D
Sbjct: 279 RFAV-----GIVIGRNGEMIKKIQNDAGVRIQFKPDD----GTTPDRIAQITGPPDRCQH 329
Query: 97 AVDLVIDKLLTELHAEDQADDV------------------GTKTKLRLIVPNSSCGSIIG 138
A +++ D LL + A + G + IVP G IIG
Sbjct: 330 AAEIITD-LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIG 388
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
K G TIKS S A I++ R N +L T+ GT + A +LI K+
Sbjct: 389 KGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 442
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 64/292 (21%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL--- 95
+ V + + G +IG+GG I+ Q +SG +IQ++ P +R M++GT + +
Sbjct: 100 YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPESVQSAK 156
Query: 96 RAVDLVIDK--LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
R +D +++K H D G + +++P S G +IGK G TIK + +A
Sbjct: 157 RLLDQIVEKGRPAPGFH---HGDGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQE--RA 210
Query: 154 VIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
+K+ + D D+ + +TG + +A E++L + + + +
Sbjct: 211 GVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRN--------- 261
Query: 213 FSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKDDRTNSLTIGVADEHIGFVV 272
YG +GG + + + + +G V+
Sbjct: 262 -------------------------EYGSRIGGNE----------GIDVPIPRFAVGIVI 286
Query: 273 GRGGRNIMEISQISGARIKVS-DRGDFFSGTSERKVTISGPQRSIRTAESMI 323
GR G I +I +G RI+ D G T +R I+GP + A +I
Sbjct: 287 GRNGEMIKKIQNDAGVRIQFKPDDGT----TPDRIAQITGPPDRCQHAAEII 334
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKVS-DRGDFFSGTSERKVTISGPQRSIRTAES 321
V D +GF++GRGG I I Q SG +I+++ D G G ER ++G S+++A+
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG----GLPERSCMLTGTPESVQSAKR 157
Query: 322 MIMQKV 327
++ Q V
Sbjct: 158 LLDQIV 163
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG I ISQ SGARI++ + + + TI G + I A +I +K+
Sbjct: 384 GLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIG 443
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 76/198 (38%), Gaps = 51/198 (25%)
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALEL 187
VP+ G IIG+ G I +S I+I+ GL +R LTGT + A L
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIA---PDSGGLPERSCMLTGTPESVQSAKRL 158
Query: 188 ILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRK 247
+ D + + P GFH +G P G
Sbjct: 159 L------DQIVEKGRPAP---------GFH---HGDGP-------------------GNA 181
Query: 248 FQNNKDDRTNSLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKV 307
Q I + G V+G+GG I ++ + +G ++ + G +G +++ +
Sbjct: 182 VQE----------IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTG-ADKPL 230
Query: 308 TISGPQRSIRTAESMIMQ 325
I+G ++ A+ M+++
Sbjct: 231 RITGDPYKVQQAKEMVLE 248
>sp|Q9Y2W6|TDRKH_HUMAN Tudor and KH domain-containing protein OS=Homo sapiens GN=TDRKH
PE=1 SV=2
Length = 561
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I V +IG+ G+ I + Q+GARI + +R+++ISG ++ +
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTED----VGDERVLLISGFPVQVCK 110
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A I ++LTE T +L VP S G IIG+ G TI+S S A I
Sbjct: 111 A-KAAIHQILTE----------NTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKIT 159
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ L+ RL+ ++GT E A LIL K+SED
Sbjct: 160 CDKESEGTLLLS-RLIKISGTQKEVAAAKHLILEKVSED 197
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 258 SLTIGVADEHIGFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIR 317
S + V +G ++GRGG I I + SGA+I D+ + R + ISG Q+ +
Sbjct: 126 SEQLSVPQRSVGRIIGRGGETIRSICKASGAKI-TCDKESEGTLLLSRLIKISGTQKEVA 184
Query: 318 TAESMIMQKVA 328
A+ +I++KV+
Sbjct: 185 AAKHLILEKVS 195
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 263 VADEHIGFVVGRGGRNIMEISQISGARIKV--SDRGDFFSGTSERKVTISGPQRSIRTAE 320
V E + ++GR G NI ++ + +GARI V D GD ER + ISG + A+
Sbjct: 59 VPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGD------ERVLLISGFPVQVCKAK 112
Query: 321 SMIMQ 325
+ I Q
Sbjct: 113 AAIHQ 117
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++ + VP + IIG+ GA IK + A I + D ++R++ ++G +
Sbjct: 54 EIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVG----DERVLLISGFPVQVC 109
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAG 210
+A I L+E+T S+ ++VP G
Sbjct: 110 KAKAAIHQILTENTPVSEQLSVPQRSVG 137
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 56/265 (21%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 115
Query: 107 -----TELHAEDQADDV---------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + +LRL++ S G IIG GA IK +++Q
Sbjct: 116 SPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 175
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYS 199
IK+ + HS DR+V + G D + +++IL +SE Y
Sbjct: 176 TTIKLFQECCPHS----TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYD 231
Query: 200 QTMTVPYTYAG--VFFSGFHGMPYG 222
+T Y Y G + F G P G
Sbjct: 232 ET----YDYGGFTMMFDDRRGRPVG 252
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L+
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKIDEPLE---GSEDRIITITGTQDQIQNAQYLL 451
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 LELI 188
L+
Sbjct: 448 QYLL 451
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG+ I +I SGA IK+ + G+ +R +TI+G Q I+ A+ ++ V
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEP---LEGSEDRIITITGTQDQIQNAQYLLQNSVK 456
Query: 329 YASD 332
+D
Sbjct: 457 QYAD 460
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 56/265 (21%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 115
Query: 107 -----TELHAEDQADDV---------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + +LRL++ S G IIG GA IK +++Q
Sbjct: 116 SPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 175
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYS 199
IK+ + HS DR+V + G D + +++IL +SE Y
Sbjct: 176 TTIKLFQECCPHS----TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYD 231
Query: 200 QTMTVPYTYAG--VFFSGFHGMPYG 222
+T Y Y G + F G P G
Sbjct: 232 ET----YDYGGFTMMFDDRRGRPVG 252
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L+
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKIDEPLE---GSEDRIITITGTQDQIQNAQYLL 451
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 LELI 188
L+
Sbjct: 448 QYLL 451
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG+ I +I SGA IK+ + G+ +R +TI+G Q I+ A+ ++ V
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEP---LEGSEDRIITITGTQDQIQNAQYLLQNSVK 456
Query: 329 YASD 332
+D
Sbjct: 457 QYAD 460
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 56/265 (21%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 115
Query: 107 -----TELHAEDQADDV---------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + +LRL++ S G IIG GA IK +++Q
Sbjct: 116 SPTATSQLPLESDAVECLNYQHFKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 175
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYS 199
IK+ + HS DR+V + G D + +++IL +SE Y
Sbjct: 176 TTIKLFQECCPHS----TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYD 231
Query: 200 QTMTVPYTYAG--VFFSGFHGMPYG 222
+T Y Y G + F G P G
Sbjct: 232 ET----YDYGGFTMMFDDRRGRPVG 252
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L+
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKIDEPLE---GSEDRIITITGTQDQIQNAQYLL 451
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 LELI 188
L+
Sbjct: 448 QYLL 451
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG+ I +I SGA IK+ + G+ +R +TI+G Q I+ A+ ++ V
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEP---LEGSEDRIITITGTQDQIQNAQYLLQNSVK 456
Query: 329 YASDRLM 335
S +
Sbjct: 457 QYSGKFF 463
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 56/265 (21%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 115
Query: 107 -----TELHAEDQADDV---------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + +LRL++ S G IIG GA IK +++Q
Sbjct: 116 SPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 175
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYS 199
IK+ + HS DR+V + G D + +++IL +SE Y
Sbjct: 176 TTIKLFQECCPHS----TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYD 231
Query: 200 QTMTVPYTYAG--VFFSGFHGMPYG 222
+T Y Y G + F G P G
Sbjct: 232 ET----YDYGGFTMMFDDRRGRPVG 252
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L+
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKIDEPLE---GSEDRIITITGTQDQIQNAQYLL 451
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 LELI 188
L+
Sbjct: 448 QYLL 451
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG+ I +I SGA IK+ + G+ +R +TI+G Q I+ A+ ++ V
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEP---LEGSEDRIITITGTQDQIQNAQYLLQNSVK 456
Query: 329 YASDRLM 335
S +
Sbjct: 457 QYSGKFF 463
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 56/265 (21%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 115
Query: 107 -----TELHAEDQADDV---------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + +LRL++ S G IIG GA IK +++Q
Sbjct: 116 SPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 175
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYS 199
IK+ + HS DR+V + G D + +++IL +SE Y
Sbjct: 176 TTIKLFQECCPHS----TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYD 231
Query: 200 QTMTVPYTYAG--VFFSGFHGMPYG 222
+T Y Y G + F G P G
Sbjct: 232 ET----YDYGGFTMMFDDRRGRPVG 252
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L+
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKIDEPLE---GSEDRIITITGTQDQIQNAQYLL 451
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 LELI 188
L+
Sbjct: 448 QYLL 451
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 269 GFVVGRGGRNIMEISQISGARIKVSDRGDFFSGTSERKVTISGPQRSIRTAESMIMQKVA 328
G ++G+GG+ I +I SGA IK+ + G+ +R +TI+G Q I+ A+ ++ V
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEP---LEGSEDRIITITGTQDQIQNAQYLLQNSVK 456
Query: 329 YASDRLM 335
S +
Sbjct: 457 QYSGKFF 463
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,889,101
Number of Sequences: 539616
Number of extensions: 5337877
Number of successful extensions: 18343
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 17180
Number of HSP's gapped (non-prelim): 913
length of query: 336
length of database: 191,569,459
effective HSP length: 118
effective length of query: 218
effective length of database: 127,894,771
effective search space: 27881060078
effective search space used: 27881060078
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)