BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019748
(336 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 213/312 (68%), Gaps = 19/312 (6%)
Query: 1 MDFSLENPFTN--FHELFNDDDEDSTETILESLFLVESDHMPSKSYIKTLKGRDLDNSLR 58
M+F LE+P ++ H FNDD + ET+ SLFLVE HMPS Y +LK S R
Sbjct: 1 MEFHLEHPLSHSSLHNNFNDDTD--YETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNR 58
Query: 59 SRAVSSILQFSCKFD-PFLSYLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQ 117
++A+SSI Q+S KFD P L+YLAVNY+DR+LSS++MPQ KPW L+L+++SC SL+AKMR+
Sbjct: 59 NQAISSITQYSRKFDDPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRK 118
Query: 118 IEFSYTQFQADGGLIFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKD---L 174
+ S + +G FD Q I+RME +ILGALKWRMRS+TPF+FL+FFISLF+LK+ L
Sbjct: 119 PDMSVSDLPVEGEF-FDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPL 177
Query: 175 TVQRALKTRASEVIFQAQIDIKLIEFKPSIIAASALLFASRELFPLQFHCFRKAISNCPY 234
++ +LK++ S++ F Q DI +EFKPS+IA +ALLFAS EL PLQF CF I+ C Y
Sbjct: 178 LLKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQCTY 237
Query: 235 VNKENLLRCYNAMQDTSMDDEYESEIDLVSSSYTPVNVLDCRVSSSGSDKTNVTTTDTKA 294
VNK+ L+ CY A+Q+ + E+E S+ T VNVLD + SS SDK+ +T T
Sbjct: 238 VNKDELMECYKAIQERDIIVG-ENE----GSTETAVNVLDQQFSSCESDKS-ITIT---- 287
Query: 295 TSSSSDSSTTST 306
SSS TST
Sbjct: 288 ASSSPKRRKTST 299
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 163/329 (49%), Gaps = 41/329 (12%)
Query: 2 DFSLENPFTNFHELFNDDDEDSTETILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRA 61
+F LENPFT+ + + SL E H PS S + R+ +
Sbjct: 19 EFDLENPFTS-----------PADEPIASLLDAEGHHSPSVSAAASAARREAAGFI---- 63
Query: 62 VSSILQFSCKFD--PFLSYLAVNYMDRYLSSQEMP-QPKPWKLRLLAVSCFSLAAKM-RQ 117
S +++ + D P ++YLA+NY+DRYLS +++ + PW RLLA+SC +LAAKM R
Sbjct: 64 --SKVRYDGELDVHPRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRA 121
Query: 118 IEFSYTQFQADGGLIFDTQTIQRMECLILGALKWRMRSITPFTFLSFFIS--LFKLKDLT 175
S Q +FD IQRME ++L AL+WR RS+TP FL FF+S + +
Sbjct: 122 AAISAADIQRGEEFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPA 181
Query: 176 VQRALKTRASEVIFQAQIDIKLIEFKPSIIAASALLFASRELFPLQFHCFRKAISNCPYV 235
+ A+K RA +++ + Q ++K+ EF PS+ AA+ALL A+ E+ F ++ CP+V
Sbjct: 182 LLDAIKARAVDLLLRVQPEVKMAEFSPSVAAAAALLAAAGEVAGAHLLGFEAGVAACPFV 241
Query: 236 NKENLLRCYNAMQDTSMDDEYESEIDLVSSSYTPVNVLDCRVSSSGSDKTNVTTTDTKAT 295
N E L C M + S +S+ TPV VL S+S S+ TT + A
Sbjct: 242 NSEKLRECGEVM--AAACGVGPSWAAAATSAETPVTVLGHHRSAS-SESERTTTVGSAAN 298
Query: 296 SSSSDSSTTSTELSPERDTKRRKLSSYRN 324
S+ D KRR + R
Sbjct: 299 SA---------------DAKRRCMGPPRQ 312
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 130/227 (57%), Gaps = 9/227 (3%)
Query: 35 ESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFSC--KFDPFLSYLAVNYMDRYLSSQE 92
E +P Y+ + R LD S R +V+ IL+ F P +YLAVNYMDR+L ++
Sbjct: 59 ERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARR 118
Query: 93 MPQPKPWKLRLLAVSCFSLAAKMRQIEF-SYTQFQADG-GLIFDTQTIQRMECLILGALK 150
+P+ W ++LLAV+C SLAAKM +I S FQ G +F+ +TI+RME L+L L
Sbjct: 119 LPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLD 178
Query: 151 WRMRSITPFTFLSFFISLFKL-KDLTVQRALKTRASEVIFQAQIDIKLIEFKPSIIAASA 209
WR+RS+TPF F+SFF +K+ T + A+E+I + +E+ PS IAA+A
Sbjct: 179 WRLRSVTPFDFISFFA--YKIDPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAA 236
Query: 210 LLFASRELFPLQ--FHCFRKAISNCPYVNKENLLRCYNAMQDTSMDD 254
+L + EL L + + C ++KE ++RCY M+ ++++
Sbjct: 237 ILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLMKAMAIEN 283
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 126/218 (57%), Gaps = 17/218 (7%)
Query: 35 ESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS--CKFDPFLSYLAVNYMDRYLSSQE 92
E+++ P Y L+ R +D + R+ +VS IL+ F P +YLAVNYMDR+LS +
Sbjct: 59 EAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRH 118
Query: 93 MPQPKPWKLRLLAVSCFSLAAKMRQ-IEFSYTQFQADGG-LIFDTQTIQRMECLILGALK 150
+P+ + W ++LLAV+C SLAAKM + + S Q + +F+ +TI RME LIL AL
Sbjct: 119 LPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRMEFLILTALN 178
Query: 151 WRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLIEFKPSIIAASAL 210
WR+RS+TPFTF+ FF A K ++ ++ A DI+ ++ PS +AA+A+
Sbjct: 179 WRLRSVTPFTFIDFF-------------ACKHISNAMVQNANSDIQFLDHCPSSMAAAAV 225
Query: 211 LFASRELFPLQFHCFRKAISNCPYVNKENLLRCYNAMQ 248
L A+ E L F A++ C + +E + CY MQ
Sbjct: 226 LCATGETPSLAFVNPELAVNWCIGLAEEGISSCYQLMQ 263
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 116/204 (56%), Gaps = 5/204 (2%)
Query: 24 TETILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFSC---KFDPFLSYLA 80
+E I+ + E H+PS YIK L+ DLD ++ R + + +C +F P LA
Sbjct: 43 SEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLA 102
Query: 81 VNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSY-TQFQ-ADGGLIFDTQTI 138
+NY+DR+LS ++P K W L+LLAV+C SLAAK+ + E Q D +F+ +++
Sbjct: 103 MNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSV 162
Query: 139 QRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLI 198
QRME L+L LKWR+R+ITP +++ +F+ D L +R+ +VI I +
Sbjct: 163 QRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFL 222
Query: 199 EFKPSIIAASALLFASRELFPLQF 222
EF+PS +AA+ L S EL + F
Sbjct: 223 EFRPSEVAAAVALSVSGELQRVHF 246
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 156/293 (53%), Gaps = 17/293 (5%)
Query: 35 ESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFSC--KFDPFLSYLAVNYMDRYLSSQE 92
E DH P + Y++ L+ L+ S R A+ I + F P YLAVNY+DR+LSS
Sbjct: 72 EMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYLAVNYLDRFLSSFN 131
Query: 93 MPQPKPWKLRLLAVSCFSLAAKMRQ--IEFSYTQFQADGGLIFDTQTIQRMECLILGALK 150
+P + W +LL+VSC SLA KM + + D +F+ + I+RME +++ LK
Sbjct: 132 LPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKRMELIVMKTLK 191
Query: 151 WRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLIEFKPSIIAASAL 210
WR++++TPF+F+ +F+ F + L + S++ D + + F+PS IAA+ +
Sbjct: 192 WRLQAVTPFSFIGYFLDKFN-EGKPPSYTLASWCSDLTVGTLKDSRFLSFRPSEIAAAVV 250
Query: 211 LFASRELFPLQFHCFRKAI--SNCPYVNKENLLRCYNAMQDTSMDDEYESEIDLVSSSYT 268
L E QF F A+ S P VNKE ++RCY M + ++ + + S ++
Sbjct: 251 LAVLAE---NQFLVFNSALGESEIP-VNKEMVMRCYELMVEKALVKKIRNSNASSSVPHS 306
Query: 269 PVNVLDCRVSSSGSDKTNVTTTDTKATSSSSDSSTTSTELSPERDTKRRKLSS 321
P+ VLD S SD T + ++ S+S++ S + +P +KRR+L++
Sbjct: 307 PITVLDAACFSFRSDDTTLGSSQ----SNSNNKDYNSQDSAPA--SKRRRLNT 353
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 6/200 (3%)
Query: 24 TETILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFSC---KFDPFLSYLA 80
+E I+ + E H P Y+K L+ DLD ++R +A+ I + +C +F P LA
Sbjct: 35 SEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWK-ACEELQFGPLCICLA 93
Query: 81 VNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEF-SYTQFQADGGL-IFDTQTI 138
+NY+DR+LS ++P K W ++LLAV+C SLAAK+ + Q Q + +F+ +++
Sbjct: 94 MNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKSV 153
Query: 139 QRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLI 198
QRME L+L L+WR+R++TP +++ +F+S D L TR+ +VI I +
Sbjct: 154 QRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGIDFL 213
Query: 199 EFKPSIIAASALLFASRELF 218
EF+ S IAA+ L S E F
Sbjct: 214 EFRASEIAAAVALSVSGEHF 233
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 128/238 (53%), Gaps = 22/238 (9%)
Query: 24 TETILESLFLVESDHMPSKSYIKTLKGR--DLDNSLRSRAVSSILQFSC--KFDPFLSYL 79
+E + SL E HMP Y + L+G D+D +RS A+ I + F +YL
Sbjct: 74 SEECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFSSVTAYL 133
Query: 80 AVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQ--------IEFSYTQFQADGGL 131
AVNY+DR+LS E+P+ + W +LL+V+C S+AAKM + ++ +F
Sbjct: 134 AVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRF------ 187
Query: 132 IFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQA 191
+F+ +TI RME L+L L WRM+++TPF+++ +F+ + R+ R+SE+I +
Sbjct: 188 LFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGN-AAPRSWLLRSSELILRI 246
Query: 192 QIDIKLIEFKPSIIAASALLFASRELFPLQFHCFRKAISNCPYVNKENLLRCYNAMQD 249
+EF+PS IAA+ + E + +A + +V+K +L+C A+QD
Sbjct: 247 AAGTGFLEFRPSEIAAAVAATVAGEATGVVEEDIAEAFT---HVDKGRVLQCQEAIQD 301
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 151/305 (49%), Gaps = 37/305 (12%)
Query: 13 HELFNDDDE---------------DSTETILESLFLVESDHMPSKSYIKTLKGRDLDNSL 57
H+LF DD +E ++ + + E + P Y+K L DLD S+
Sbjct: 37 HQLFAKDDNFGGNGSIPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSV 96
Query: 58 RSRAVSSILQFSCK--FDPFLSYLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKM 115
R++A+ IL+ F L++NY+DR+L+S E+P+ K W +LLAVSC SLA+KM
Sbjct: 97 RNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKM 156
Query: 116 RQIEFSY-TQFQA-DGGLIFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKD 173
+ + + Q D +F+ +TI+RME L++ L WR++++TPF+F+ +F+
Sbjct: 157 EETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISGH- 215
Query: 174 LTVQRALKTRASEVIFQAQIDIKLIEFKPSIIAASALLFASRELFPLQFHCF--RKAISN 231
V L R+S I I+ ++F+PS A A + C KA+S+
Sbjct: 216 --VSENLIYRSSRFILNTTKAIEFLDFRPS---EIAAAAAVSVSISGETECIDEEKALSS 270
Query: 232 CPYVNKENLLRCYNAM---------QDTSMDDEYESEIDLVSSSYTPVNVLDCRVSSSGS 282
YV +E + RC N M + TS+ E ++ + + + +PV VL+ S S
Sbjct: 271 LIYVKQERVKRCLNLMRSLTGEENVRGTSLSQE-QARVAVRAVPASPVGVLEATCLSYRS 329
Query: 283 DKTNV 287
++ V
Sbjct: 330 EERTV 334
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 121/220 (55%), Gaps = 8/220 (3%)
Query: 35 ESDHMPSKSYIKTLK-GRDLDNSLRSRAVSSILQFSCKFD--PFLSYLAVNYMDRYLSSQ 91
E H P Y L+ GR D + R+ +V+ IL+ + P +YLAV+YMDR+LS
Sbjct: 92 ERSHSPRADYPGRLRSGRPADLAARADSVAWILKVRELYGMLPVTAYLAVSYMDRFLSLH 151
Query: 92 EMPQPKPWKLRLLAVSCFSLAAKMRQ-IEFSYTQFQA-DGGLIFDTQTIQRMECLILGAL 149
+P W ++LLAV+C SLAAKM + + S Q D IF+ +TI RME L+L AL
Sbjct: 152 RLPG-NGWAMQLLAVTCLSLAAKMEETLVPSILDLQMEDARYIFEHRTIFRMELLVLDAL 210
Query: 150 KWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLIEFKPSIIAASA 209
WR+RSITPFTF+ F + R L +A++V D + ++ PS IAA+A
Sbjct: 211 DWRLRSITPFTFMYLFADKVDPNGKHI-RELIHQATQVTLATIHDTEFLDHCPSSIAAAA 269
Query: 210 LLFASRELFPLQFHCFRKAIS-NCPYVNKENLLRCYNAMQ 248
+L AS E+ L +S +++E ++RCY MQ
Sbjct: 270 VLCASSEIMQLVSIDHGTLVSWRIIGLDEEAIIRCYRLMQ 309
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 147/280 (52%), Gaps = 24/280 (8%)
Query: 35 ESDHMPSKSYIKTL----KGRDLDNSLRSRAVSSILQFS--CKFDPFLSYLAVNYMDRYL 88
E H+P + Y++ L G DL ++RS A+ I + KF P + L+VNY+DR+L
Sbjct: 64 EQQHIPMEGYLQRLLLQPDGLDL-VAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFL 122
Query: 89 SSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYT-QFQA-DGGLIFDTQTIQRMECLIL 146
S ++PQ + +LLAV+ SLAAKM + + Q D +F+T+TI+RME +L
Sbjct: 123 SVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVL 182
Query: 147 GALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLIEFKPSIIA 206
ALKWRM+++T +F+ +++ F D AL +R+ ++I + + F+PS IA
Sbjct: 183 NALKWRMQAVTACSFIDYYLHKFNDDDTPSTSAL-SRSVDLILSTCKVAEFLVFRPSEIA 241
Query: 207 ASALLFASRE----LFPLQFHCFRKAISNCPYVNKENLLRCYNAMQDTSM--DDEYESEI 260
AS L A E +F C++ + KE +LRCY +QD + + +S
Sbjct: 242 ASVALVALEEHETSMFERVATCYKN-------LKKERVLRCYEMIQDKIIMRNIMRQSAG 294
Query: 261 DLVSSSYTPVNVLDCRVS-SSGSDKTNVTTTDTKATSSSS 299
+ S +P+ VLD S S+ T V + T SS+S
Sbjct: 295 SVFSIPKSPIGVLDAAACISQQSEDTFVGSPATNYESSAS 334
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 150/309 (48%), Gaps = 30/309 (9%)
Query: 24 TETILESLFLVESDHMPSKSYIKTLK--GRDLDNSLRSR--AVSSILQFSC--KFDPFLS 77
+E + L E+DHMP + Y + L+ G D D LR R A+ I + F P +
Sbjct: 65 SEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFAPLTA 124
Query: 78 YLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYT-QFQ-ADGGLIFDT 135
LAVNY+DR+LS ++P K W +LLAV+C SLAAKM + + + Q + +F+
Sbjct: 125 CLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFEA 184
Query: 136 QTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDI 195
+TIQRME L+L LKWRM+++TPF+++ +F+ D R+ +SE+I
Sbjct: 185 KTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRS-ALLSSELILCIARGT 243
Query: 196 KLIEFKPSIIAASALLFASRELFPLQFHCFRKAISNCPYVNKENLLRCYNAMQDTSMDDE 255
+ + F+PS IAA+ E + F +VNKE + C +Q +
Sbjct: 244 ECLGFRPSEIAAAVAAAVVGE----EHAAFS-------HVNKERMSHCQEVIQAMELIHP 292
Query: 256 YESEID--LVSSSY--TPVNVLDCRVSSSGSDKTNVTTTDTKATSSSSDSSTTSTELSPE 311
S VSSS +P VLD + + + D+ S + SS S
Sbjct: 293 KPSSPSRVFVSSSIPRSPTGVLD------AAGCLSYRSDDSAVASHYAASSWGYEHDSSP 346
Query: 312 RDTKRRKLS 320
+KRRK+S
Sbjct: 347 VSSKRRKIS 355
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 11/242 (4%)
Query: 44 YIKTLKGRDLDNSLRSRAVSSI--LQFSCKFDPFLSYLAVNYMDRYLSSQE--MPQPKPW 99
Y+ L ++ S R A+ I +Q F P +YLAVNY+DR+LSS E + PW
Sbjct: 90 YLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPW 149
Query: 100 KLRLLAVSCFSLAAKMRQIEFSYT-QFQA-DGGLIFDTQTIQRMECLILGALKWRMRSIT 157
+LL V+C SLAAKM + T Q + +FD +TI RME ++L LKWRM+++T
Sbjct: 150 MQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLKWRMQAVT 209
Query: 158 PFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLIEFKPSIIA-ASALLFASRE 216
PFT++ F+ + + L +R +E+I + F+PS IA A AL +
Sbjct: 210 PFTYIGHFLDKINEGN-RITSELISRCTEIILSTMKATVFLRFRPSEIATAVALSVVADG 268
Query: 217 LFPLQFHCFRKAISNCPYVNKENLLRCYNAMQDTSMDDEYESEIDLVSSSYTPVN-VLDC 275
L F ++ S P V+K+N+ RC+ AMQ+ ++ + + S Y N VLDC
Sbjct: 269 GRVLDFGGVLES-SKLP-VDKDNVGRCHQAMQEMALVMQNSTASPSDSLCYDMTNPVLDC 326
Query: 276 RV 277
+
Sbjct: 327 HI 328
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 18/168 (10%)
Query: 59 SRAVSSILQFSC--KFDPFLSYLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMR 116
S +VS IL+ F P +YLAV+YMDR++SS+ +P W +LL V+C SLAAKM
Sbjct: 126 SESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLPD-HGWASQLLCVACLSLAAKME 184
Query: 117 Q--------IEFSYTQFQADGGLIFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISL 168
+ ++ T+F IF+ +TIQRME ++L L WR+RS+TPF F+ FF
Sbjct: 185 ESSAPPLLDLQIEGTRF------IFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACK 238
Query: 169 FKLKDLTVQRALKTRASEVIFQAQIDIKLIEFKPSIIAASALLFASRE 216
+ R L RA ++I A +++ + S +AA+A+LFA E
Sbjct: 239 VGSSGRS-SRILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNE 285
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 120/250 (48%), Gaps = 16/250 (6%)
Query: 8 PFTNF----HELFNDDDEDSTETILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVS 63
PF N H++ DDDE ST + L D + ++ + + LD + ++
Sbjct: 43 PFLNLGLSDHDMLWDDDELSTLISKQEPCLY--DEILDDEFLVLCREKALDWIFKVKS-- 98
Query: 64 SILQFSCKFDPFLSYLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSY- 122
F+ + LAVNY DR+++S++ KPW +L A++C SLAAK+ +I +
Sbjct: 99 -----HYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFL 153
Query: 123 TQFQADGG-LIFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALK 181
FQ + +F+ +TIQRME L+L L WRM +TP +F I + K Q
Sbjct: 154 LDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKS-HHQLEFL 212
Query: 182 TRASEVIFQAQIDIKLIEFKPSIIAASALLFASRELFPLQFHCFRKAISNCPYVNKENLL 241
+R ++ D + + F PS++A + ++ R+L ++ + V+ E +
Sbjct: 213 SRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKMCDEAVYQSQLMTLLKVDSEKVN 272
Query: 242 RCYNAMQDTS 251
+CY + D S
Sbjct: 273 KCYELVLDHS 282
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 141/271 (52%), Gaps = 36/271 (13%)
Query: 58 RSRAVSSILQFSCKFDPFL--SYLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKM 115
R+ V I++ + F L +Y+AV Y+DR+L+ + + + K W L+LL+V+C SLAAK+
Sbjct: 100 RAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAKV 159
Query: 116 RQIEFS-YTQFQADGGLIFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDL 174
+ +F+ D ++D ++ RME L+L LKW+M + TPF++L+ F + F+ +
Sbjct: 160 EERRPPRLPEFKLD---MYDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAKFRHDE- 215
Query: 175 TVQRALKTRASEVIFQAQIDIKLIEFKPSIIAASALLFA-SRELFPLQFHCFRKAISNCP 233
++A+ RA E IF + I + ++PS IA +A+L A ++E P S
Sbjct: 216 --RKAIVLRAIECIFASIKVISSVGYQPSTIALAAILIARNKETAPNLDELKSVVGSLWQ 273
Query: 234 YVNKENLLRCYNAM---QDTSMDDEYESEIDLVSSSYTPVNVLDCRVSSSGSDKTNVTTT 290
++ ++ CYN M +D SM E V+SSG ++ +
Sbjct: 274 QLDTGHVYSCYNKMMIQEDRSMQSTTE-------------------VASSGVSVAHIGGS 314
Query: 291 DTKATSSSSDSSTTSTELSPERDTKRRKLSS 321
+ A ++++ T+ E +P D KR++L S
Sbjct: 315 EDSAMGGANNA--TTLEATP--DKKRKRLHS 341
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 5/200 (2%)
Query: 58 RSRAVSSILQFSCK--FDPFLSYLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKM 115
R AV IL+ + F + LA+ Y+D+++ S + + KPW L+L++V+C SLAAK+
Sbjct: 87 RKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKV 146
Query: 116 RQIEFS-YTQFQA-DGGLIFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKD 173
+ + FQ + +F+ +TIQRME LIL L+W+M ITP +F+ I LK+
Sbjct: 147 EETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKN 206
Query: 174 LTVQRALKTRASEVIFQAQIDIKLIEFKPSIIAASALLFASRELFPLQFHCFRKAISNCP 233
+ ++ D + + + PS++AA+ ++ ++ P ++ +
Sbjct: 207 -NAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTNLLGVL 265
Query: 234 YVNKENLLRCYNAMQDTSMD 253
+ KE + CY+ + +D
Sbjct: 266 NLTKEKVKTCYDLILQLPVD 285
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 56 SLRSRAVSSILQFSCK--FDPFLSYLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAA 113
S R A+ +L+ F + LAVNY DR+++S ++ KPW +L+AV+ SLAA
Sbjct: 94 SCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAA 153
Query: 114 KMRQIEFS-YTQFQADGG-LIFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKL 171
K+ +I+ Q + +F+ +TIQRME LIL L+WRM +TP +F I F
Sbjct: 154 KVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFGS 213
Query: 172 KDLTVQRALKTRASEVIFQAQIDIKLIEFKPSIIAASALLFASRELFPLQFHCFRKAISN 231
K Q + ++ D + + + PS++A + ++ EL P ++ I+
Sbjct: 214 K-WHQQLDFCRKCERLLISVIADTRFMRYFPSVLATAIMILVFEELKPCDEVEYQSQITT 272
Query: 232 CPYVNKENLLRCYNAM 247
VN+E + CY +
Sbjct: 273 LLKVNQEKVNECYELL 288
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 16/186 (8%)
Query: 77 SYLAVNYMDRYLSSQEMP-QPKPWKLRLLAVSCFSLAAKMRQIEF-SYTQFQADGGLIFD 134
+YLA+ Y DR+ + + + PW RLL+++C S+AAKM + + + ++F A GG +F
Sbjct: 121 AYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVAAKMEEYQSPALSEFDAGGGRVFC 180
Query: 135 TQTIQRMECLILGALKWRMRSITPFTFLSFFISLF----------KLKDLTVQRALKTRA 184
+ +I+RME L+L L WRM ++TPF FL F S + A
Sbjct: 181 SDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRLHRHHHGGAGAAGHGAAAAARVALNA 240
Query: 185 SEVIFQAQIDIKLIEFKPSIIAASALLFASRELFPLQFHCFRKAISNCP---YVNKENLL 241
IF +++++PS +AA+A+L AS PL +SN ++KEN+
Sbjct: 241 VGFIFATAEAGSVLDYRPSTVAAAAILAASYGA-PLTKEALESKMSNLSPSCLIDKENVH 299
Query: 242 RCYNAM 247
CY+ M
Sbjct: 300 ACYSMM 305
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 46 KTLKGRDLDNSLRSRAVSSILQFSCKFD--PFLSYLAVNYMDRYLSSQ--EMPQPKPWKL 101
+TL + +S R A+ IL +F +Y+A++Y D +L + + + + W +
Sbjct: 60 ETLPSKTTSSSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAM 119
Query: 102 RLLAVSCFSLAAKMRQ-IEFSYTQFQADGGLIFDTQTIQRMECLILGALKWRMRSITPFT 160
RLL+V+C SLAAKM + I +Q+ D +F I++ E LIL L W+M ITPF
Sbjct: 120 RLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFH 179
Query: 161 FLSFFISLFKLKDLTVQRALK-TRASEVIFQAQIDIKLIEFKPSIIAA 207
+ ++F++ + +V + L R+S+ + +I E++ ++AA
Sbjct: 180 YFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISFTEYRQFVVAA 227
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 77 SYLAVNYMDRYLSSQEMPQP-KPWKLRLLAVSCFSLAAKMRQIEF-SYTQFQA---DGGL 131
+YLA+ Y DR+ + + + PW RLLAV+C SLAAKM + + ++F+A D G
Sbjct: 130 AYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACVSLAAKMEEYRAPALSEFRAGVGDDGY 189
Query: 132 IFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQA 191
F I+RME L+L L WRM ++TPF +L S +L+ ++ +IF A
Sbjct: 190 EFSCVCIRRMELLVLSTLDWRMAAVTPFDYLPCLSS--RLRRHVGGGGGAGASAALIFSA 247
Query: 192 QIDIKLIEFKPSIIAASALLFA-----SRELFPLQFHCFRKAISNCPYVNKENLLRCYNA 246
+++ +PS +AA+A+L A +RE + +S ++KE++ CY+A
Sbjct: 248 AEAASVLDHRPSTVAAAAVLAATHGALTREALESKM----SGLSPSFLLDKEDVFACYSA 303
Query: 247 M 247
M
Sbjct: 304 M 304
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 20/203 (9%)
Query: 24 TETILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS----CKFDPFLSYL 79
T+ +L+++ E PS SY K ++ L N +R + +L+ C+ + F L
Sbjct: 22 TDRVLQTMLKAEETSCPSMSYFKCVQKEILPN-MRKIVATWMLEVCEEQKCEEEVF--PL 78
Query: 80 AVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQ 139
A+NY+DR+LS + P K W L+LL +C LA+KM++ A+ I+ +I+
Sbjct: 79 AMNYLDRFLSVE--PLRKSW-LQLLGATCMFLASKMKE----TIPLTAEKLCIYTDNSIR 131
Query: 140 R-----MECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQID 194
ME +L LKW + S+TP F+ F++ L + T Q ++ A + D
Sbjct: 132 PDELLIMELRVLNKLKWDLASVTPHDFIEHFLNKMPLTEDTKQ-IIRKHAQTFVALCATD 190
Query: 195 IKLIEFKPSIIAASALLFASREL 217
+ I PS+IAA ++ A + L
Sbjct: 191 VNFISNPPSMIAAGSVAAAVQGL 213
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 17 NDDDEDSTETILESLFL----VESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFSCKF 72
N +D T+ +++ E+ PS +++TL+ +D++ S+R+ + +++ + ++
Sbjct: 213 NYEDPQLCATLASDIYMHLREAETRKHPSTDFMETLQ-KDVNPSMRAILIDWLVEVAEEY 271
Query: 73 D--PFLSYLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQI------EFSYTQ 124
P YL VNY+DRYLS E+ + +L+LL V+C +AAK ++I EF Y
Sbjct: 272 RLVPDTLYLTVNYIDRYLSGNEINR---QRLQLLGVACMLIAAKYKEICAPQVEEFCYI- 327
Query: 125 FQADGGLIFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRA 184
D D + ME +L LK+ M + T FL F+ + ++ D L+ A
Sbjct: 328 --TDNTYFRDE--VLEMEASVLNYLKFEMTAPTAKCFLRRFVRVAQVSDEDPALHLEFLA 383
Query: 185 SEVIFQAQIDIKLIEFKPSIIAASALLFASRELFPLQFHCFRKAISNCPYVNKENLLRCY 244
+ V + ++ L+ + PS++AASA+ A L P + H + +++ L C
Sbjct: 384 NYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPAK-HPWNSTLAHYTQYKSSELSDCV 442
Query: 245 NAMQ 248
A+
Sbjct: 443 KALH 446
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 20/201 (9%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQF----SCKFDPFLSYLAVN 82
+L+++ E +++PS +Y K ++ +++ +R + +L+ C+ + F LA+N
Sbjct: 27 VLQTMLKAEENYLPSPNYFKCVQ-KEIVPKMRKIVATWMLEVCEEQKCEEEVF--PLAMN 83
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQ--- 139
Y+DR+LS + K +L+LL +C LA+KM++ A+ I+ +++
Sbjct: 84 YLDRFLSVEPT---KKTRLQLLGATCMFLASKMKET----VPLTAEKLCIYTDNSVRPGE 136
Query: 140 --RMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKL 197
+ME L L LKW + S+TP F+ F++ + + ++ L+ A + D+
Sbjct: 137 LLQMELLALNKLKWDLASVTPHDFIEHFLAKLPIHQ-SSKQILRKHAQTFVALCATDVNF 195
Query: 198 IEFKPSIIAASALLFASRELF 218
I PS+IAA ++ A + L+
Sbjct: 196 IASPPSMIAAGSVAAAVQGLY 216
>sp|P55169|CCND1_CHICK G1/S-specific cyclin-D1 OS=Gallus gallus GN=CCND1 PE=2 SV=1
Length = 292
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 104/200 (52%), Gaps = 20/200 (10%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS----CKFDPFLSYLAVN 82
+L+++ E PS SY K ++ +++ +R + +L+ C+ + F LA+N
Sbjct: 27 VLQTMLKAEETCSPSVSYFKCVQ-KEILPYMRKIVATWMLEVCEEQKCEEEVF--PLAMN 83
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQ--- 139
Y+DR+LS + + K +L+LL +C +A+KM++ A+ I+ +I+
Sbjct: 84 YLDRFLSFEPL---KKSRLQLLGATCMFVASKMKET----IPLTAEKLCIYTDNSIRPDE 136
Query: 140 --RMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKL 197
+ME L++ LKW + ++TP F+ F++ L + T Q ++ A + D+K
Sbjct: 137 LLQMELLLVNKLKWNLAAMTPHDFIEHFLTKMPLAEDTKQ-IIRKHAQTFVALCATDVKF 195
Query: 198 IEFKPSIIAASALLFASREL 217
I PS+IAA +++ A + L
Sbjct: 196 ISNPPSMIAAGSVVAAVQGL 215
>sp|Q7F830|CCA11_ORYSJ Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1
Length = 508
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 18/223 (8%)
Query: 34 VESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFSCKFD--PFLSYLAVNYMDRYLSSQ 91
E+ PS +++T++ +D++ S+R+ + +++ + ++ P YL VNY+DRYLS
Sbjct: 251 AETRKRPSTDFMETIQ-KDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGN 309
Query: 92 EMPQPKPWKLRLLAVSCFSLAAKMRQI------EFSYTQFQADGGLIFDTQTIQRMECLI 145
E+ + +L+LL V+C +AAK +I EF Y D D + ME +
Sbjct: 310 EINR---QRLQLLGVACMLIAAKYEEICAPQVEEFCYI---TDNTYFRDE--VLEMEASV 361
Query: 146 LGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLIEFKPSII 205
L LK+ + + T FL F+ + ++ D L+ A+ V + ++ L+ + PS++
Sbjct: 362 LNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLV 421
Query: 206 AASALLFASRELFPLQFHCFRKAISNCPYVNKENLLRCYNAMQ 248
AASA+ A L P + H + +++ L C A+
Sbjct: 422 AASAIFLAKFILQPTK-HPWNSTLAHYTQYKSSELSDCVKALH 463
>sp|Q0JPA4|CCA12_ORYSJ Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2
Length = 477
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 119/244 (48%), Gaps = 22/244 (9%)
Query: 17 NDDDEDSTETILESLFL----VESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFSCKF 72
N +D T+ +++ E+ PS +++T++ +D++ S+R+ + +++ + ++
Sbjct: 200 NYEDPQLCATLASDIYMHLREAETRKRPSTDFMETIQ-KDVNPSMRAILIDWLVEVAEEY 258
Query: 73 D--PFLSYLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQI------EFSYTQ 124
P YL VNY+DRYLS E+ + +L+LL V+C +AAK +I EF Y
Sbjct: 259 RLVPDTLYLTVNYIDRYLSGNEINR---QRLQLLGVACMLIAAKYEEICAPQVEEFCYI- 314
Query: 125 FQADGGLIFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRA 184
D D + ME +L LK+ + + T FL F+ + ++ D L+ A
Sbjct: 315 --TDNTYFRDE--VLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLA 370
Query: 185 SEVIFQAQIDIKLIEFKPSIIAASALLFASRELFPLQFHCFRKAISNCPYVNKENLLRCY 244
+ V + ++ L+ + PS++AASA+ A L P + H + +++ L C
Sbjct: 371 NYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPTK-HPWNSTLAHYTQYKSSELSDCV 429
Query: 245 NAMQ 248
A+
Sbjct: 430 KALH 433
>sp|P25010|CCNAL_DAUCA G2/mitotic-specific cyclin C13-1 (Fragment) OS=Daucus carota PE=2
SV=1
Length = 341
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 9/222 (4%)
Query: 34 VESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFSCKFD--PFLSYLAVNYMDRYLSSQ 91
+E+ P +YI+ ++ +D+ +++R V +++ S ++ P YLA++Y+DRYLS
Sbjct: 87 METKRRPMMNYIEQVQ-KDVTSNMRGVLVDWLVEVSLEYKLLPETLYLAISYVDRYLSVN 145
Query: 92 EMPQPKPWKLRLLAVSCFSLAAKMRQIE-FSYTQFQADGGLIFDTQTIQRMECLILGALK 150
+ + KL+LL VS F +A+K +I+ + F + Q + +ME +L LK
Sbjct: 146 VLNR---QKLQLLGVSSFLIASKYEEIKPKNVADFVDITDNTYSQQEVVKMEADLLKTLK 202
Query: 151 WRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLIEFKPSIIAASAL 210
+ M S T TFL F ++ + D+ + + A+ + + +D +EF PS+IAAS
Sbjct: 203 FEMGSPTVKTFLGFIRAVQENPDVP-KLKFEFLANYLAELSLLDYGCLEFVPSLIAASVT 261
Query: 211 LFASRELFPLQFHCFRKAISNCPYVNKENLLRCYNAMQDTSM 252
A + P + + A+ C ++L C + D M
Sbjct: 262 FLARFTIRP-NVNPWSIALQKCSGYKSKDLKECVLLLHDLQM 302
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 77 SYLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQI---EFSYTQFQADGGLIF 133
++ A NY+DR+LS + + W + +++V C SLA K+ ++ Q + G F
Sbjct: 106 AFNAANYLDRFLSINCHLKWEEWMVEVVSVGCLSLACKLDEVTIPSLHDLQMEEAMGHSF 165
Query: 134 DTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQI 193
TI+ ME +L AL+WR+ +TPF+FL + T RAL + ++ +
Sbjct: 166 RASTIRDMELTLLKALRWRLACVTPFSFLPVTTT------TTTTRAL-------LLRSLL 212
Query: 194 DIKLIEFKPSIIAASALLFAS 214
D + F S++AASAL +S
Sbjct: 213 DPSFLRFDASLLAASALTLSS 233
>sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D2 OS=Homo sapiens GN=CCND2 PE=1 SV=1
Length = 289
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 28/197 (14%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQF----SCKFDPFLSYLAVN 82
+L++L +E ++P SY K ++ +D+ +R + +L+ C+ + F LA+N
Sbjct: 26 VLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVF--PLAMN 82
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQRME 142
Y+DR+L+ +P PK L+LL C LA+K+++ + A+ I+ +I+ E
Sbjct: 83 YLDRFLAG--VPTPKS-HLQLLGAVCMFLASKLKET----SPLTAEKLCIYTDNSIKPQE 135
Query: 143 CL-----ILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRA----LKTRASEVIFQAQI 193
L +LG LKW + ++TP F+ L+ L QR ++ A I
Sbjct: 136 LLEWELVVLGKLKWNLAAVTPHDFIEHI-----LRKLPQQREKLSLIRKHAQTFIALCAT 190
Query: 194 DIKLIEFKPSIIAASAL 210
D K + PS+IA ++
Sbjct: 191 DFKFAMYPPSMIATGSV 207
>sp|P47794|CCNE1_DANRE G1/S-specific cyclin-E1 OS=Danio rerio GN=ccne1 PE=2 SV=1
Length = 410
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 20/153 (13%)
Query: 78 YLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQI------EFSYTQFQADGGL 131
YL +Y DR++++QE L+L+ +SC +AAKM +I +F+Y DG
Sbjct: 169 YLGQDYFDRFMATQENVLKT--TLQLIGISCLFIAAKMEEIYPPKVHQFAYV---TDGAC 223
Query: 132 IFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKD----LTVQ--RALKTRAS 185
D I ME +I+ L W + +TP +L+ ++ + LK+ LT Q +A + +
Sbjct: 224 TEDD--ILSMEIIIMKELNWSLSPLTPVAWLNIYMQMAYLKETAEVLTAQYPQATFVQIA 281
Query: 186 EVIFQAQIDIKLIEFKPSIIAASALL-FASREL 217
E++ +D++ +EF S++AASAL F+S EL
Sbjct: 282 ELLDLCILDVRSLEFSYSLLAASALFHFSSLEL 314
>sp|Q0P5D3|CCND2_BOVIN G1/S-specific cyclin-D2 OS=Bos taurus GN=CCND2 PE=2 SV=1
Length = 289
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQF----SCKFDPFLSYLAVN 82
+L++L +E ++P SY K ++ +D+ +R + +L+ C+ + F LA+N
Sbjct: 26 VLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVF--PLAIN 82
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQRME 142
Y+DR+L+ +P PK L+LL C LA+K+++ A+ I+ +I+ E
Sbjct: 83 YLDRFLAG--VPTPKT-HLQLLGAVCMFLASKLKET----IPLTAEKLCIYTDNSIKPQE 135
Query: 143 CL-----ILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRAL-KTRASEVIFQAQIDIK 196
L +LG LKW + ++TP F+ L KL + + +L + A I D K
Sbjct: 136 LLEWELVVLGKLKWNLAAVTPHDFIEHI--LRKLPQPSEKLSLIRKHAQTFIALCATDFK 193
Query: 197 LIEFKPSIIAASAL 210
+ PS+IA ++
Sbjct: 194 FAMYPPSMIATGSV 207
>sp|Q8WNW2|CCND2_PIG G1/S-specific cyclin-D2 OS=Sus scrofa GN=CCND2 PE=2 SV=1
Length = 288
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQF----SCKFDPFLSYLAVN 82
+L++L +E ++P SY K ++ +D+ +R + +L+ C+ + F LA+N
Sbjct: 26 VLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVF--PLAIN 82
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQRME 142
Y+DR+L+ +P PK L+LL C LA+K+++ A+ I+ +I+ E
Sbjct: 83 YLDRFLAG--VPTPKT-HLQLLGAVCMFLASKLKET----IPLTAEKLCIYTDNSIKPQE 135
Query: 143 CL-----ILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRAL-KTRASEVIFQAQIDIK 196
L +LG LKW + ++TP F+ L KL + +L + A I D K
Sbjct: 136 LLEWELVVLGKLKWNLAAVTPHDFIEHI--LRKLPQPNEKLSLIRKHAQTFIALCATDFK 193
Query: 197 LIEFKPSIIAASAL 210
+ PS+IA ++
Sbjct: 194 FAMYPPSMIATGSV 207
>sp|Q04827|CCND2_RAT G1/S-specific cyclin-D2 OS=Rattus norvegicus GN=Ccnd2 PE=2 SV=1
Length = 288
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 20/193 (10%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQF----SCKFDPFLSYLAVN 82
+L++L +E ++P SY K ++ +D+ +R + +L+ C+ + F LA+N
Sbjct: 25 VLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVF--PLAMN 81
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQ-IEFSYTQFQADGGLIFDTQTIQRM 141
Y+DR+L+ +P PK L+LL C LA+K+++ I + + Q +
Sbjct: 82 YLDRFLAG--VPTPKT-HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSVKPQELLEW 138
Query: 142 ECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRA----LKTRASEVIFQAQIDIKL 197
E ++LG LKW + ++TP F+ L+ L Q+ ++ A I D K
Sbjct: 139 ELVVLGKLKWNLAAVTPHDFIEHI-----LRKLPQQKEKLSLIRKHAQTFIALCATDFKF 193
Query: 198 IEFKPSIIAASAL 210
+ PS+IA ++
Sbjct: 194 AMYPPSMIATGSV 206
>sp|P30280|CCND2_MOUSE G1/S-specific cyclin-D2 OS=Mus musculus GN=Ccnd2 PE=2 SV=1
Length = 289
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 20/193 (10%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQF----SCKFDPFLSYLAVN 82
+L++L +E ++P SY K ++ +D+ +R + +L+ C+ + F LA+N
Sbjct: 25 VLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVF--PLAMN 81
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQ-IEFSYTQFQADGGLIFDTQTIQRM 141
Y+DR+L+ +P PK L+LL C LA+K+++ I + + Q +
Sbjct: 82 YLDRFLAG--VPTPKT-HLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSVKPQELLEW 138
Query: 142 ECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRA----LKTRASEVIFQAQIDIKL 197
E ++LG LKW + ++TP F+ L+ L Q+ ++ A I D K
Sbjct: 139 ELVVLGKLKWNLAAVTPHDFIEHI-----LRKLPQQKEKLSLIRKHAQTFIALCATDFKF 193
Query: 198 IEFKPSIIAASAL 210
+ PS+IA ++
Sbjct: 194 AMYPPSMIATGSV 206
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 17/203 (8%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFSCKFD--PFLSYLAVNYM 84
I + L + E+ PS +++T++ +++D S+R+ + +++ + ++ P YL VNY+
Sbjct: 88 IYKHLRVAETKKRPSTDFVETIQ-KNIDTSMRAVLIDWLVEVTEEYRLVPETLYLTVNYI 146
Query: 85 DRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQI------EFSYTQFQADGGLIFDTQTI 138
DRYLSS+ + + K++LL V+C +A+K +I E Y + +
Sbjct: 147 DRYLSSKVINR---RKMQLLGVACLLIASKYEEICPPQVEELCYISDNT-----YTKDEV 198
Query: 139 QRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLI 198
+ME +L LK+ M + T FL F+ ++ L+ A+ + + ++ LI
Sbjct: 199 LKMEASVLKYLKFEMTAPTTKCFLRRFLRAAQVCHEAPVLHLEFLANYIAELSLLEYSLI 258
Query: 199 EFKPSIIAASALLFASRELFPLQ 221
+ PS+IAAS++ A L P +
Sbjct: 259 CYVPSLIAASSIFLAKFILKPTE 281
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
Query: 80 AVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIE--FSYTQFQADGGLIFDTQT 137
A N DR++ + W + L+AV+ S+A+K ++ +F T
Sbjct: 102 AANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASKFNEVTTPLLEELEMEGLTHMFHVNT 161
Query: 138 IQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKL 197
+ +ME +IL AL+WR+ ++T +TF +S + + R + + D+K+
Sbjct: 162 VAQMELIILKALEWRVNAVTSYTFSQTLVSKI---GMVGDHMIMNRITNHLLDVICDLKM 218
Query: 198 IEFKPSIIAASALLFASRELFPLQFHCFRKAISNCPYVN-KENLLRCYNAMQDTSMDDE 255
+++ PS++A +A+ ++ R++I N N KE +++C + M++ +D +
Sbjct: 219 LQYPPSVVATAAIWIL------MEDKVCRESIMNLFEQNHKEKIVKCVDGMKNRDIDHQ 271
>sp|Q9C6Y3|CCA11_ARATH Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1
Length = 460
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFSCKFD--PFLSYLAVNYM 84
I + L E+ P Y++ ++ +D+++S+R V +++ S ++ P YL VNY+
Sbjct: 198 IYKHLRASEAKKRPDVDYMERVQ-KDVNSSMRGILVDWLIEVSEEYRLVPETLYLTVNYI 256
Query: 85 DRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQI------EFSYTQFQADGGLIFDTQTI 138
DRYLS + + KL+LL V+C +AAK +I EF Y D + D +
Sbjct: 257 DRYLSGNVISR---QKLQLLGVACMMIAAKYEEICAPQVEEFCYI---TDNTYLKD--EV 308
Query: 139 QRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLI 198
ME +L LK+ M + T FL F+ L+ A+ + + ++ ++
Sbjct: 309 LDMESDVLNYLKFEMTAPTTKCFLRRFVRAAHGVHEAPLMQLECMANYIAELSLLEYTML 368
Query: 199 EFKPSIIAASALLFASRELFP 219
PS++AASA+ A L P
Sbjct: 369 SHSPSLVAASAIFLAKYILDP 389
>sp|P39948|CCND1_RAT G1/S-specific cyclin-D1 OS=Rattus norvegicus GN=Ccnd1 PE=2 SV=1
Length = 295
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 102/200 (51%), Gaps = 20/200 (10%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS----CKFDPFLSYLAVN 82
+L ++ E PS SY K ++ R++ S+R + +L+ C+ + F LA+N
Sbjct: 27 VLRAMLKTEETCAPSVSYFKCVQ-REIVPSMRKIVATWMLEVCEEQKCEEEVF--PLAMN 83
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQ--- 139
Y+DR+LS + + K +L+LL +C +A+KM++ A+ I+ +I+
Sbjct: 84 YLDRFLSLEPL---KKSRLQLLGATCMFVASKMKET----IPLTAEKLCIYTDNSIRPEE 136
Query: 140 --RMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKL 197
+ME L++ LKW + ++TP F+ F+S D Q ++ A + D+K
Sbjct: 137 LLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEADENKQ-IIRKHAQTFVALCATDVKF 195
Query: 198 IEFKPSIIAASALLFASREL 217
I PS++AA +++ A + L
Sbjct: 196 ISNPPSMVAAGSVVAAMQGL 215
>sp|P25322|CCND1_MOUSE G1/S-specific cyclin-D1 OS=Mus musculus GN=Ccnd1 PE=1 SV=1
Length = 295
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 20/200 (10%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS----CKFDPFLSYLAVN 82
+L ++ E PS SY K ++ +++ S+R + +L+ C+ + F LA+N
Sbjct: 27 VLRAMLKTEETCAPSVSYFKCVQ-KEIVPSMRKIVATWMLEVCEEQKCEEEVF--PLAMN 83
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQ--- 139
Y+DR+LS + + K +L+LL +C +A+KM++ A+ I+ +I+
Sbjct: 84 YLDRFLSLEPL---KKSRLQLLGATCMFVASKMKET----IPLTAEKLCIYTDNSIRPEE 136
Query: 140 --RMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKL 197
+ME L++ LKW + ++TP F+ F+S D Q ++ A + D+K
Sbjct: 137 LLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEADENKQ-TIRKHAQTFVALCATDVKF 195
Query: 198 IEFKPSIIAASALLFASREL 217
I PS++AA +++ A + L
Sbjct: 196 ISNPPSMVAAGSVVAAMQGL 215
>sp|P24864|CCNE1_HUMAN G1/S-specific cyclin-E1 OS=Homo sapiens GN=CCNE1 PE=1 SV=2
Length = 410
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 20/154 (12%)
Query: 78 YLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQI------EFSYTQFQADGGL 131
YLA ++ DRY+++QE L+L+ +S +AAK+ +I +F+Y DG
Sbjct: 167 YLAQDFFDRYMATQENVVKT--LLQLIGISSLFIAAKLEEIYPPKLHQFAYV---TDGAC 221
Query: 132 IFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDL------TVQRALKTRAS 185
D I ME +I+ ALKWR+ +T ++L+ ++ + L DL + + + +
Sbjct: 222 SGDE--ILTMELMIMKALKWRLSPLTIVSWLNVYMQVAYLNDLHEVLLPQYPQQIFIQIA 279
Query: 186 EVIFQAQIDIKLIEFKPSIIAASALL-FASRELF 218
E++ +D+ +EF I+AASAL F+S EL
Sbjct: 280 ELLDLCVLDVDCLEFPYGILAASALYHFSSSELM 313
>sp|P30282|CCND3_MOUSE G1/S-specific cyclin-D3 OS=Mus musculus GN=Ccnd3 PE=2 SV=1
Length = 292
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 20/195 (10%)
Query: 25 ETILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS----CKFDPFLSYLA 80
+ +L+SL +E ++P SY + ++ +++ +R +L+ C+ D F LA
Sbjct: 25 QRVLQSLLRLEERYVPRASYFQCVQ-KEIKPHMRKMLAYWMLEVCEEQRCEEDVF--PLA 81
Query: 81 VNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTI-- 138
+NY+DRYLS +P K +L+LL C LA+K+R+ T + I+ Q +
Sbjct: 82 MNYLDRYLSC--VPTRKA-QLQLLGTVCLLLASKLRET----TPLTIEKLCIYTDQAVAP 134
Query: 139 ---QRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDI 195
+ E L+LG LKW + ++ FL+ + L Q +K A + D
Sbjct: 135 WQLREWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPS-DRQALVKKHAQTFLALCATDY 193
Query: 196 KLIEFKPSIIAASAL 210
+ PS+IA ++
Sbjct: 194 TFAMYPPSMIATGSI 208
>sp|Q2KI22|CCND1_BOVIN G1/S-specific cyclin-D1 OS=Bos taurus GN=CCND1 PE=2 SV=1
Length = 295
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 20/187 (10%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS----CKFDPFLSYLAVN 82
+L ++ E PS SY K ++ +++ S+R + +L+ C+ + F LA+N
Sbjct: 27 VLRAMLKAEETCAPSVSYFKCVQ-KEILPSMRKIVATWMLEVCEEQKCEEEVF--PLAMN 83
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQ--- 139
Y+DR+LS + + K +L+LL +C +A+KM++ A+ I+ +I+
Sbjct: 84 YLDRFLSLEPV---KKSRLQLLGATCMFVASKMKET----IPLTAEKLCIYTDNSIRPDE 136
Query: 140 --RMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKL 197
ME +++ LKW + ++TP F+ F+S + + Q ++ A + D+K
Sbjct: 137 LLHMELVLVNKLKWNLAAMTPHDFIEHFLSKMPVAEENKQ-IIRKHAQTFVALCATDVKF 195
Query: 198 IEFKPSI 204
I PS+
Sbjct: 196 ISNPPSM 202
>sp|P30281|CCND3_HUMAN G1/S-specific cyclin-D3 OS=Homo sapiens GN=CCND3 PE=1 SV=2
Length = 292
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 25 ETILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS----CKFDPFLSYLA 80
+ +L+SL +E ++P SY + ++ R++ +R +L+ C+ + F LA
Sbjct: 25 QRVLQSLLRLEERYVPRASYFQCVQ-REIKPHMRKMLAYWMLEVCEEQRCEEEVF--PLA 81
Query: 81 VNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTI-- 138
+NY+DRYLS +P K +L+LL C LA+K+R+ T + I+ +
Sbjct: 82 MNYLDRYLSC--VPTRKA-QLQLLGAVCMLLASKLRET----TPLTIEKLCIYTDHAVSP 134
Query: 139 ---QRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDI 195
+ E L+LG LKW + ++ FL+F + L Q +K A + D
Sbjct: 135 RQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPR-DRQALVKKHAQTFLALCATDY 193
Query: 196 KLIEFKPSIIAASALLFASREL 217
+ PS+IA ++ A + L
Sbjct: 194 TFAMYPPSMIATGSIGAAVQGL 215
>sp|P49706|CCND2_CHICK G1/S-specific cyclin-D2 OS=Gallus gallus GN=CCND2 PE=3 SV=1
Length = 291
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS----CKFDPFLSYLAVN 82
+L +L +E ++P SY K ++ +D+ +R + +L+ C+ + F LA+N
Sbjct: 26 VLHNLLTIEERYLPQCSYFKCVQ-KDIQPFMRRMVATWMLEVCEEQKCEEEVF--PLAMN 82
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQRME 142
Y+DR+L+ +P K L+LL C LA+K+++ A+ I+ +I+ E
Sbjct: 83 YLDRFLAV--VPTRK-CHLQLLGAVCMFLASKLKET----IPLTAEKLCIYTDNSIKPQE 135
Query: 143 CL-----ILGALKWRMRSITPFTFLSFFISLFKL-KDLTVQRALKTRASEVIFQAQIDIK 196
L +LG LKW + ++TP F+ + L KD V ++ A I D
Sbjct: 136 LLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPLPKDKLV--LIRKHAQTFIALCATDFN 193
Query: 197 LIEFKPSIIAASAL 210
+ PS+IA ++
Sbjct: 194 FAMYPPSMIATGSV 207
>sp|Q64HP0|CCND1_CANFA G1/S-specific cyclin-D1 OS=Canis familiaris GN=CCND1 PE=2 SV=1
Length = 295
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS----CKFDPFLSYLAVN 82
+L ++ E PS SY K ++ +++ S+R + +L+ C+ + F LA+N
Sbjct: 27 VLRAMLKAEETCAPSVSYFKCVQ-KEILPSMRKIVATWMLEVCEEQKCEEEVF--PLAMN 83
Query: 83 YMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQ--- 139
Y++R+LS + + K +L+LL +C +A+KM++ A+ I+ +I+
Sbjct: 84 YLNRFLSLEPV---KKSRLQLLGATCMFVASKMKET----IPLTAEKLCIYTDNSIRPDE 136
Query: 140 --RMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKL 197
+ME L++ LKW + ++TP F+ F+S + + Q ++ A + D+K
Sbjct: 137 LLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPVAEENKQ-IIRKHAQTFVALCATDVKF 195
Query: 198 IEFKPSI 204
I PS+
Sbjct: 196 ISNPPSM 202
>sp|P48961|CCND3_RAT G1/S-specific cyclin-D3 OS=Rattus norvegicus GN=Ccnd3 PE=2 SV=1
Length = 293
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 20/195 (10%)
Query: 25 ETILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS----CKFDPFLSYLA 80
+ +L+SL +E ++P SY + ++ +++ +R +L+ C+ D F LA
Sbjct: 25 QRVLQSLLRLEERYVPRGSYFQCVQ-KEIKPHMRKMLAYWMLEVCEEQRCEEDVF--PLA 81
Query: 81 VNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQT--- 137
+NY+DRYLS +P K +L+LL C LA+K+R+ T + I+ Q
Sbjct: 82 MNYLDRYLSC--VPTRKA-QLQLLGTVCLLLASKLRET----TPLTIEKLCIYTDQAMAP 134
Query: 138 --IQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDI 195
++ E L+LG LKW + ++ FL+ + L Q +K A + D
Sbjct: 135 WQLREWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPS-DRQALVKKHAQTFLALCATDY 193
Query: 196 KLIEFKPSIIAASAL 210
+ PS+IA ++
Sbjct: 194 TFAMYPPSMIATGSI 208
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 27 ILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS--CKFDPFLSYLAVNYM 84
I E L + E + P+ Y++ + ++ S+RS + +++ + + P YLAVNY+
Sbjct: 182 IYEHLRVSEVNKRPALDYMERTQS-SINASMRSILIDWLVEVAEEYRLSPETLYLAVNYV 240
Query: 85 DRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTIQ----R 140
DRYL+ + + L+LL V+C +AAK ++ + D I D ++
Sbjct: 241 DRYLTGNAINK---QNLQLLGVTCMMIAAKYEEVCVPQVE---DFCYITDNTYLRNELLE 294
Query: 141 MECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDIKLIEF 200
ME +L LK+ + + T FL F+ + + + A + + +D ++ +
Sbjct: 295 MESSVLNYLKFELTTPTAKCFLRRFLRAAQGRKEVPSLLSECLACYLTELSLLDYAMLRY 354
Query: 201 KPSIIAASALLFASRELFP 219
PS++AASA+ A L P
Sbjct: 355 APSLVAASAVFLAQYTLHP 373
>sp|Q3MHH5|CCND3_BOVIN G1/S-specific cyclin-D3 OS=Bos taurus GN=CCND3 PE=2 SV=1
Length = 292
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 25 ETILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS----CKFDPFLSYLA 80
+ +L+SL +E ++P SY + ++ R++ +R +L+ C+ + F LA
Sbjct: 25 QRVLQSLLRLEERYVPRASYFQCVQ-REIKPHMRKMLAYWMLEVCEEQRCEEEVF--PLA 81
Query: 81 VNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQIEFSYTQFQADGGLIFDTQTI-- 138
+NY+DRYLS +P K +L+LL C LA+K+R+ T + I+ ++
Sbjct: 82 MNYLDRYLSC--VPTRKA-QLQLLGAVCMLLASKLRET----TPLTIEKLCIYTDHSVSP 134
Query: 139 ---QRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALKTRASEVIFQAQIDI 195
+ E L+LG LKW + ++ FL+ + L Q +K A + D
Sbjct: 135 RQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPR-DRQALVKKHAQTFLALCATDY 193
Query: 196 KLIEFKPSIIAASALLFASREL 217
+ PS+IA ++ A + L
Sbjct: 194 TFAMYPPSMIATGSIGAAVQGL 215
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 10 TNFHELFNDDDEDSTETILESLFLVESDHMPSKSYIKTLKGRDLDNSLRSRAVSSILQFS 69
+ HE+F + + + I L E+ + P +Y++ K D+++S+R+ + +++ S
Sbjct: 154 SKLHEVF--ELPEYAQDIHNYLKKSEAKYRPKSNYMR--KQTDINSSMRAILIDWLVEVS 209
Query: 70 --CKFDPFLSYLAVNYMDRYLSSQEMPQPKPWKLRLLAVSCFSLAAKMRQI------EFS 121
K P YL+V+Y+DR+LS + + KL+L+ +C +AAK +I EF
Sbjct: 210 EEYKLIPQTLYLSVSYIDRFLSHMSVLR---GKLQLVGAACMLVAAKFEEIYPPEVAEFV 266
Query: 122 YTQFQADGGLIFDTQTIQRMECLILGALKWRMRSITPFTFLSFFISLFKLKDLTVQRALK 181
Y + + + RME LIL L + + T FLS ++ K + + L
Sbjct: 267 YITDDT-----YTAKQVLRMEHLILKTLAFDLSVPTCRDFLSRYLFAANAKPESQLKYLA 321
Query: 182 TRASEVIFQAQIDIKLIEFKPSIIAASALLFASREL 217
SE+ DI +++ PS+IAAS++ A+ L
Sbjct: 322 EYLSELTL-INCDIS-VKYAPSMIAASSICVANHML 355
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,506,928
Number of Sequences: 539616
Number of extensions: 3925519
Number of successful extensions: 21613
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 19337
Number of HSP's gapped (non-prelim): 1803
length of query: 336
length of database: 191,569,459
effective HSP length: 118
effective length of query: 218
effective length of database: 127,894,771
effective search space: 27881060078
effective search space used: 27881060078
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)