BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019749
(336 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94AX5|GDT11_ARATH GDT1-like protein 1, chloroplastic OS=Arabidopsis thaliana
GN=At1g64150 PE=2 SV=2
Length = 370
Score = 337 bits (864), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 201/300 (67%), Positives = 221/300 (73%), Gaps = 24/300 (8%)
Query: 51 SLRNPYL---------NFSRDPGASCENRNDVDC-----------KNCKMTRES--VHNL 88
S+RN Y N S+ G C RND C +N + ES H+
Sbjct: 49 SVRNQYFSRCLTQLRRNESQQLGFRCFQRNDAACYLEKAESEEHDRNLDVLVESSIAHSR 108
Query: 89 ANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISRGFASAFLLIFF 147
++ F+ G + L G+ A AA + QS GDLGDIS GFASAFLLIFF
Sbjct: 109 REIQRVLMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISSGFASAFLLIFF 168
Query: 148 SELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTD 207
SELGDKTFFIAALLAARNSAATVF GTFGAL MT+ISV+LGRTFHYVDE+LPFRFG TD
Sbjct: 169 SELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVDEVLPFRFGGTD 228
Query: 208 LPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTII 267
LPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKEAELAVSE SGNGAGI+AAA+TII
Sbjct: 229 LPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGNGAGIVAAANTII 287
Query: 268 STFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEK 327
STF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH ATLLAVLGGSLLG FLSEK
Sbjct: 288 STFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEK 347
>sp|B8AAM2|GDT11_ORYSI GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica
GN=OsI_00941 PE=3 SV=2
Length = 341
Score = 317 bits (811), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/226 (76%), Positives = 193/226 (85%), Gaps = 3/226 (1%)
Query: 103 LLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLA 162
+L LQGSQ A+A +F G+Q +GDLGDIS GFASAFLLIFFSELGD+TFFIAALLA
Sbjct: 96 VLMLQGSQQALAGTEFM-GMQDV--VGDLGDISTGFASAFLLIFFSELGDRTFFIAALLA 152
Query: 163 ARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYF 222
ARNS A +F GTFGALA MT+ISV+LGR FHYVD I+PF FG TD P+DD A CLLVY+
Sbjct: 153 ARNSGAIIFLGTFGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPVDDFLAACLLVYY 212
Query: 223 GVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKS 282
GV+TLLDAAS D K +EQ+EAELAVS+F GNGAGII+AASTI STF LVF+AEWGDKS
Sbjct: 213 GVTTLLDAASGDEEKMNEEQEEAELAVSKFLGNGAGIISAASTIASTFVLVFIAEWGDKS 272
Query: 283 FFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKV 328
FFSTIALAAASSPLGVI G+LAGH VATL+AVLGGSLLGTFLSEK+
Sbjct: 273 FFSTIALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLGTFLSEKI 318
>sp|Q5NAY7|GDT11_ORYSJ GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0221700 PE=3 SV=2
Length = 341
Score = 316 bits (810), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/226 (75%), Positives = 193/226 (85%), Gaps = 3/226 (1%)
Query: 103 LLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLA 162
+L LQGSQ A+A +F G+Q +GDLGDIS GFASAFLLIFFSELGD+TFFIAALLA
Sbjct: 96 VLMLQGSQQALAGTEFM-GMQDV--VGDLGDISTGFASAFLLIFFSELGDRTFFIAALLA 152
Query: 163 ARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYF 222
ARNS A +F GTFGALA MT+ISV+LGR FHYVD I+PF FG TD P+DD A CLLVY+
Sbjct: 153 ARNSGAIIFLGTFGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPVDDFLAACLLVYY 212
Query: 223 GVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKS 282
G++TLLDAAS D K +EQ+EAELAVS+F GNGAGII+AASTI STF LVF+AEWGDKS
Sbjct: 213 GITTLLDAASGDEEKMNEEQEEAELAVSKFLGNGAGIISAASTIASTFVLVFIAEWGDKS 272
Query: 283 FFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKV 328
FFSTIALAAASSPLGVI G+LAGH VATL+AVLGGSLLGTFLSEK+
Sbjct: 273 FFSTIALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLGTFLSEKI 318
>sp|Q9T0H9|GDT12_ARATH GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana
GN=At4g13590 PE=1 SV=2
Length = 359
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 130/201 (64%), Gaps = 16/201 (7%)
Query: 137 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 196
GF +AF LIF SE+GDKTFFIAALLA + V G+ GAL+ MT++SV++G+ F V
Sbjct: 145 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSV- 203
Query: 197 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSED---------EQKEAEL 247
P +F QT LPI + AA+ LL++FG+ ++ DA +++++ E EAE
Sbjct: 204 ---PAQF-QTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYSEAEE 259
Query: 248 AVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHV 307
V E + + + +F+LVF AEWGD+S +T+AL AA SPLGV GA+AGH+
Sbjct: 260 LVKEKASKK--LTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHL 317
Query: 308 VATLLAVLGGSLLGTFLSEKV 328
VAT+LA++GG+ L ++SEK+
Sbjct: 318 VATVLAIMGGAFLANYISEKL 338
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 262 AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSL 319
A S + F+L+FV+E GDK+FF LA V+ G++ + T+L+V+ G +
Sbjct: 142 AKSGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKI 199
>sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os11g0544500 PE=2 SV=1
Length = 347
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 123/200 (61%), Gaps = 15/200 (7%)
Query: 137 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 196
GF +AF LIF SE+GDKTFFIAALLA + A V G+ AL+ MT++SVI+GR F V
Sbjct: 134 GFTAAFTLIFVSEIGDKTFFIAALLAMQYQRALVLLGSMAALSLMTIVSVIIGRIFQSV- 192
Query: 197 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA--------ASTDGLKSEDEQKEAELA 248
P +F QT LPI + AA+ LL +FG ++ DA + G E EAE
Sbjct: 193 ---PAQF-QTTLPIGEYAAIALLAFFGFKSIKDAWQLPDNANGNLQGNSESGELAEAEEL 248
Query: 249 VSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVV 308
V E + + + +F+LVF AEWGD+S +TIAL AA SP GV GA+AGH+V
Sbjct: 249 VKEKVAKK--LTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPFGVASGAIAGHLV 306
Query: 309 ATLLAVLGGSLLGTFLSEKV 328
AT LA++GG+ L +LSEK+
Sbjct: 307 ATFLAIVGGAFLANYLSEKL 326
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 252 FSGNGAGIIA--AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVA 309
F G + ++A A S + FTL+FV+E GDK+FF LA V+ G++A +
Sbjct: 119 FKGQPSAVVAMLAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYQRALVLLGSMAALSLM 178
Query: 310 TLLAVLGGSL 319
T+++V+ G +
Sbjct: 179 TIVSVIIGRI 188
>sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sll0615 PE=3 SV=1
Length = 206
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 11/190 (5%)
Query: 138 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 197
F + LLI SELGDKTFFIA +LA R V G G LAAMT++SV++G+ F +
Sbjct: 5 FTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTF--- 61
Query: 198 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGA 257
LP R+ + A V L + FG L DA + +E ++AE A++
Sbjct: 62 -LPTRY-------INYAEVALFLIFGTKLLWDARRIKATANLEEMEDAEKAIASGEKKLK 113
Query: 258 GIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGG 317
+ ++ +F L FVAEWGD++ +TIALAA+++ GV GA+ GH + ++AV+GG
Sbjct: 114 IVPRGWGIVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGG 173
Query: 318 SLLGTFLSEK 327
+ +SEK
Sbjct: 174 KFVAGRISEK 183
>sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1
Length = 324
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 104/216 (48%), Gaps = 34/216 (15%)
Query: 138 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 197
F +A +I SELGDKTFFIAA++A R + TV AG AL MT +SV+ G Y
Sbjct: 97 FVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG----YATT 152
Query: 198 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA--ASTDGLKSEDEQKEAELAV--SEFS 253
++P + + L FG+ L + S D + E E+ +AEL EF
Sbjct: 153 VIPRVYTY-------YVSTVLFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQ 205
Query: 254 G----NGAGIIAAASTI---------------ISTFTLVFVAEWGDKSFFSTIALAAASS 294
NG G + ++I + TL F+AEWGD+S +TI LAA
Sbjct: 206 RTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAARED 265
Query: 295 PLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYS 330
P GV G GH + T LAV+GG ++ +S + +
Sbjct: 266 PYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVT 301
>sp|Q93Y38|GDT13_ARATH GDT1-like protein 3 OS=Arabidopsis thaliana GN=At5g36290 PE=2 SV=1
Length = 293
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 16/194 (8%)
Query: 140 SAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEIL 199
S+F +I +E+GD+TF IAAL+A R+ ATV +G AL MT++S LGR I+
Sbjct: 87 SSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGR-------IV 139
Query: 200 PFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGI 259
P + + AA L +FG+ L A + KS +++ E+ SG G
Sbjct: 140 PNLISRKH---TNSAATVLYAFFGLRLLYIAWRSTDSKSNQKKEMEEVEEKLESGQGKTP 196
Query: 260 IA------AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLA 313
+ +F L F+AEWGD+S +TIALA + +GV GA GH V T LA
Sbjct: 197 FRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLA 256
Query: 314 VLGGSLLGTFLSEK 327
V+GGS+L + +S++
Sbjct: 257 VVGGSMLASRISQR 270
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 266 IISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLS 325
+ S+F+++ V E GD++F +A V+ GAL+ V T+L+ G ++ +S
Sbjct: 85 LFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGRIVPNLIS 144
Query: 326 EK 327
K
Sbjct: 145 RK 146
>sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1
Length = 287
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 105/225 (46%), Gaps = 45/225 (20%)
Query: 133 DISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTF 192
D R + +IF E+GDKTF +AALLA NS TVFAG++ AL MT++ V+LG
Sbjct: 45 DFLRSLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLG--- 101
Query: 193 HYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAA----STDGLKSEDEQKEAELA 248
H + P + + DI L V FG+ L++A S + + E + E+A
Sbjct: 102 HAAPLLFPRK-------LTDILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVRNEIA 154
Query: 249 -----------------------------VSEFSGNGAGIIAA--ASTIISTFTLVFVAE 277
+S+ G ++A + I F L FV+E
Sbjct: 155 ANGPIDQLLEEGAAPSHYTGHRSRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSE 214
Query: 278 WGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGT 322
WGD+S +TIA+AA+ + GV GA GH T LAV+ G + T
Sbjct: 215 WGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYIST 259
>sp|Q2R4J1|GDT13_ORYSJ GDT1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0472500
PE=2 SV=1
Length = 279
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 17/190 (8%)
Query: 144 LIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRF 203
+I SE+GD+TF IAAL+A R+ + V +G AL MTV+S LGR I+P
Sbjct: 78 MILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMTVLSTGLGR-------IVPNLI 130
Query: 204 GQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIA-- 261
+ + AA L ++FG+ L A +D K +++ E+ SG G +
Sbjct: 131 SRKH---TNSAATVLYLFFGLRLLYIAWKSDP-KGSQKKEMEEVEEKLESGQGKSTLRRF 186
Query: 262 ----AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGG 317
+ F L F+AEWGD+S +TIALA + +GV GA GH V T LAV+GG
Sbjct: 187 FGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGASLGHTVCTSLAVIGG 246
Query: 318 SLLGTFLSEK 327
S+L + +S++
Sbjct: 247 SMLASKISQR 256
>sp|A2ZE50|GDT13_ORYSI GDT1-like protein 3 OS=Oryza sativa subsp. indica GN=OsI_36063 PE=3
SV=1
Length = 279
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 17/190 (8%)
Query: 144 LIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRF 203
+I SE+GD+TF IAAL+A R+ + V +G AL MTV+S LGR I+P
Sbjct: 78 MILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMTVLSTGLGR-------IVPNLI 130
Query: 204 GQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIA-- 261
+ + AA L ++FG+ L A +D K +++ E+ SG G +
Sbjct: 131 SRKH---TNSAATVLYLFFGLRLLYIAWKSDP-KGSQKKEMEEVEEKLESGQGKSTLRRF 186
Query: 262 ----AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGG 317
+ F L F+AEWGD+S +TIALA + +GV GA GH V T LAV+GG
Sbjct: 187 FGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGASLGHTVCTSLAVIGG 246
Query: 318 SLLGTFLSEK 327
S+L + +S++
Sbjct: 247 SMLASKISQR 256
>sp|Q6ZIB9|GDT14_ORYSJ GDT1-like protein 4 OS=Oryza sativa subsp. japonica GN=Os08g0528500
PE=2 SV=1
Length = 282
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 138 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 197
F ++ +I SE+GD+TF IAAL+A R+ +TV +G AL MT++S LGR
Sbjct: 75 FFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTILSTGLGR------- 127
Query: 198 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGA 257
I+P + + AA L +FG+ L A +D K+ +++ E+ +G G
Sbjct: 128 IVPNLISRKH---TNSAATVLYAFFGLRLLYIAWRSDS-KASQKKEIEEVEEKLEAGQGK 183
Query: 258 GIIA------AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATL 311
+ +F L F+AEWGD+S +TIALA + +GV GA GH + T
Sbjct: 184 STFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAVGVAVGATLGHTICTS 243
Query: 312 LAVLGGSLLGTFLSE 326
AV+GGS+L + +S+
Sbjct: 244 FAVVGGSMLASKISQ 258
>sp|A2YXC7|GDT14_ORYSI GDT1-like protein 4 OS=Oryza sativa subsp. indica GN=OsI_29993 PE=3
SV=1
Length = 281
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 138 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 197
F ++ +I SE+GD+TF IAAL+A R+ +TV +G AL MT++S LGR
Sbjct: 74 FFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTILSTGLGR------- 126
Query: 198 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGA 257
I+P + + AA L +FG+ L A +D K+ +++ E+ +G G
Sbjct: 127 IVPNLISRKH---TNSAATVLYAFFGLRLLYIAWRSDS-KASQKKEIEEVEEKLEAGQGK 182
Query: 258 GIIA------AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATL 311
+ +F L F+AEWGD+S +TIALA + +GV GA GH + T
Sbjct: 183 STFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAVGVAVGATLGHTICTS 242
Query: 312 LAVLGGSLLGTFLSE 326
AV+GGS+L + +S+
Sbjct: 243 FAVVGGSMLASKISQ 257
>sp|Q9SX28|GDT15_ARATH GDT1-like protein 5 OS=Arabidopsis thaliana GN=At1g68650 PE=2 SV=1
Length = 228
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 131 LGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILG- 189
+G + +GF + + F SE+GDKTFF AA+LA R V AG AL MT++S LG
Sbjct: 1 MGSLLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60
Query: 190 --------RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDE 241
+ H++ L F FG L V LD +D K+ D+
Sbjct: 61 AAPNLISRKWTHHITTFLFFGFGLWSLWDGFKEGGGSEELAEVEAELD---SDLKKTNDQ 117
Query: 242 QKEAELAVSEFSGNGAGIIAAASTI-ISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIG 300
K +++ + + A S I + F++ F EWGDKS +TI LAA +PLGV+
Sbjct: 118 SKNSKIEDEQKKQKRPFLTAFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPLGVVL 177
Query: 301 GALAGHVVATLLAVLGGSLLGTFLSEKV 328
G + + T AVLGG L + +SE++
Sbjct: 178 GGIVAQTLCTTAAVLGGKSLASQISERI 205
>sp|Q4V899|TM165_RAT Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1
Length = 323
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 138 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 197
F +A +I SELGDKTFFIAA++A R + TV AG ALA MT +SV+ G Y
Sbjct: 97 FVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG----YATT 152
Query: 198 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA--ASTDGLKSEDEQKEAELAV--SEFS 253
++P + + L FG+ L + S D + E E+ +AEL EF
Sbjct: 153 VIPRVY-------TYYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQ 205
Query: 254 G----NGAGIIAAASTII--------------STFTLVFVAEWGDKSFFSTIALAAASSP 295
NG + ST I TL F+AEWGD+S +TI LAA P
Sbjct: 206 RTKLLNGPDVETGTSTAIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDP 265
Query: 296 LGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYS 330
GV G GH + T LAV+GG ++ +S + +
Sbjct: 266 YGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVT 300
>sp|P52875|TM165_MOUSE Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2
Length = 323
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 138 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 197
F +A +I SELGDKTFFIAA++A R + TV AG ALA MT +SV+ G Y
Sbjct: 97 FVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG----YATT 152
Query: 198 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA--ASTDGLKSEDEQKEAELAV--SEFS 253
++P + + L FG+ L + S D + E E+ +AEL EF
Sbjct: 153 VIPRVY-------TYYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQ 205
Query: 254 G----NGAGIIAAASTII--------------STFTLVFVAEWGDKSFFSTIALAAASSP 295
NG + ST I TL F+AEWGD+S +TI LAA P
Sbjct: 206 RTKLLNGPDVETGTSTAIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDP 265
Query: 296 LGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYS 330
GV G GH + T LAV+GG ++ +S + +
Sbjct: 266 YGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVT 300
>sp|Q9C6M1|GDT14_ARATH GDT1-like protein 4 OS=Arabidopsis thaliana GN=At1g25520 PE=2 SV=1
Length = 230
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 131 LGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILG- 189
+ + +GF + + F SE+GDKTFF AA+LA R V AG AL MT++S LG
Sbjct: 1 MSSVLQGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60
Query: 190 --------RTFHYVDEILPFRFGQTDLPIDDI------AAVCLLVYFGVSTLLDA---AS 232
+ H++ +L F FG L D + V + L A +
Sbjct: 61 AAPNLISRKWTHHITTLLFFGFGLWSL-WDGFKEGGGGSEELAEVEAELDADLKANGKSP 119
Query: 233 TDGLKSEDEQKEAELA-VSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAA 291
D K EDE K+ A +++F + + F++ F EWGDKS +TI LAA
Sbjct: 120 KDSSKREDENKKQNRAFLTQF---------FSPIFLKAFSINFFGEWGDKSQLATIGLAA 170
Query: 292 ASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKV 328
+P GV+ G + + T AV+GG L + +SE++
Sbjct: 171 DENPFGVVLGGVVAQFLCTTAAVIGGKSLASQISERI 207
>sp|B9G125|GDT15_ORYSJ GDT1-like protein 5 OS=Oryza sativa subsp. japonica GN=Os08g0433100
PE=2 SV=1
Length = 232
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 137 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILG------- 189
GF + + SE+GDKTFF AA+LA R V AG +L MT +SV LG
Sbjct: 8 GFTKSLAMTVLSEIGDKTFFAAAILAMRYPRKLVLAGCLTSLTVMTALSVSLGWVAPNLI 67
Query: 190 --RTFHYVDEILPFRFGQTDL-----PIDDIAAVCLLVYFGVSTLLDAASTDGLKS---E 239
+ H+V +L F FG L D + + + + KS +
Sbjct: 68 SRKWTHHVTTLLFFVFGILSLWEGFKEDGDSEELAEVEAELDANFKSNKAESKSKSKAND 127
Query: 240 DEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVI 299
D++K+ V +F + I F++ F EWGDKS +TI LAA +P GV+
Sbjct: 128 DKKKQQRPFVLQF---------FSPIFIKAFSITFFGEWGDKSQIATIGLAADENPFGVV 178
Query: 300 GGALAGHVVATLLAVLGGSLLGTFLSEKV 328
G + + T AV+GG L + +SEK+
Sbjct: 179 LGGVLAQALCTTAAVMGGKSLASQISEKM 207
>sp|Q9P7Q0|YLY5_SCHPO GDT1-like protein C186.05c OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPAC186.05c PE=3 SV=1
Length = 262
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 48/214 (22%)
Query: 149 ELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDL 208
ELGDK+F + ALLA + A+VF G++ AL MT +V++GR PF F ++
Sbjct: 38 ELGDKSFIVTALLAYQYGRASVFFGSYLALFFMTSFAVLVGRA-------APFLFPKS-- 88
Query: 209 PIDDIAAVCLLVYFGVSTL----------------LDAASTDGLKSEDEQKEAELAVSEF 252
I I L + FGV L D + ED +K EL +
Sbjct: 89 -ITHILGGTLFLIFGVKMLKESKEVRESQQSLENEFDKVEKIIVNEEDMKKTLELGLPAS 147
Query: 253 SGNGAGIIAA------------------ASTIISTFTLVFVAEWGDKSFFSTIALAAASS 294
+ + + + + I F L+FV+E GD+S +TI ++A
Sbjct: 148 NRSSSTLKDKFFKVFSMSCFKNLFSKKFSRAFIKAFALIFVSELGDRSQIATIVMSAKEK 207
Query: 295 PLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKV 328
L V G GH++ T++AV ++G ++S K+
Sbjct: 208 VLDVFIGVNIGHMLCTMVAV----IVGRYISNKI 237
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 135 SRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGR 190
SR F AF LIF SELGD++ +++A+ VF G T+++VI+GR
Sbjct: 176 SRAFIKAFALIFVSELGDRSQIATIVMSAKEKVLDVFIGVNIGHMLCTMVAVIVGR 231
>sp|P38301|GDT1_YEAST GCR1-dependent translation factor 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GDT1 PE=1 SV=1
Length = 280
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 43/225 (19%)
Query: 136 RGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYV 195
+ F + +I SE+GDKTF IAAL+A R+ VF+ +LA +++++ G H
Sbjct: 40 KSFLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLA---IMTILSGVVGHSA 96
Query: 196 DEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA--ASTDG--------------LKS- 238
L R+ A + LV FG ++ S D +K
Sbjct: 97 VAFLSERYTAF------FAGILFLV-FGYKLTMEGLEMSKDAGVEEEMAEVEEEIAIKDM 149
Query: 239 ----EDEQKEAELAVSEFSGN---GAGIIAAASTI---------ISTFTLVFVAEWGDKS 282
+D +K + A + N G I+ + + F +VF+ E GD+S
Sbjct: 150 NQDMDDVEKGGDTAYDKQLKNASIGKKIVHRIRELASFMFSPVWVQIFLMVFLGELGDRS 209
Query: 283 FFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEK 327
S IA+A S VI GA+ GH + + LAV+GG LL T +S +
Sbjct: 210 QISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIR 254
>sp|O35002|CTPB_BACSU Carboxy-terminal processing protease CtpB OS=Bacillus subtilis
(strain 168) GN=ctpB PE=1 SV=1
Length = 480
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 199 LPFRFGQTDLPIDDIAAVCLLV------YFGVSTLLDAASTDGLKS--EDEQKEAELAVS 250
L FR + ++P++ + A V Y +ST + + D K+ E E+KE E V
Sbjct: 188 LSFRIKRAEIPLETVFASEKKVQGHSVGYIAISTFSEHTAEDFAKALRELEKKEIEGLVI 247
Query: 251 EFSGNGAGIIAAASTIISTFT-----LVFVAEW-GDKS-FFSTIALAAASSPLGVI---G 300
+ GN G + + I+ F + +AE GDK +FST+ A P+ VI G
Sbjct: 248 DVRGNPGGYLQSVEEILKHFVTKDQPYIQIAERNGDKKRYFSTLTHKKA-YPVNVITDKG 306
Query: 301 GALAGHVVATLLAVLG 316
A A ++A L G
Sbjct: 307 SASASEILAGALKEAG 322
>sp|O43108|ATC1_YARLI Calcium-transporting ATPase 1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=PMR1 PE=3 SV=1
Length = 928
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 75 CKNCKMTRESVHNLAN--DSGLIKFVMFFGLLTLQGSQTAVAAVDFAS 120
C N K RE+ H + N D LI+ + +FGL + ++ VA V F+S
Sbjct: 415 CNNSKFNREAGHLVGNATDIALIEVLDYFGLEDTRETRKRVAEVPFSS 462
>sp|Q9UW20|PIK1_CANAL Phosphatidylinositol 4-kinase PIK1alpha OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=PIKALPHA PE=3 SV=1
Length = 977
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 2 RSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTS 45
+ +T PW+G+ +++ +S S P SK+ G L PF S +++TS
Sbjct: 313 KVMTQPWNGIDGYNV-NSQSLPDLSKAEGRDLIPFISSTESETS 355
>sp|Q6P0Q8|MAST2_HUMAN Microtubule-associated serine/threonine-protein kinase 2 OS=Homo
sapiens GN=MAST2 PE=1 SV=2
Length = 1798
Score = 32.3 bits (72), Expect = 4.9, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 54 NPYLNFSRDPGASCENRNDVDCKNCKMTRES 84
+P L+ ++ P AS + R DV C+ C +T++S
Sbjct: 1738 DPALSITQVPDASGDRRQDVPCRGCPLTQKS 1768
>sp|P50555|TNR1A_PIG Tumor necrosis factor receptor superfamily member 1A OS=Sus scrofa
GN=TNFRSF1A PE=2 SV=1
Length = 461
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 38 SLCKNQTSTSKKLSLRNPYLN-----FSRDPGA-SCENRNDVDCKN-CKMTRESVHNLAN 90
SLC N T L ++ N F RD SC N + DCKN C T E+ ++
Sbjct: 147 SLCPNGTVQLPCLEKQDTICNCHSGFFLRDKECVSCVNCKNADCKNLCPATSETRNDF-Q 205
Query: 91 DSG---LIKFVMFFGL 103
D+G L+ V+FFGL
Sbjct: 206 DTGTTVLLPLVIFFGL 221
>sp|P38414|LOX1_LENCU Linoleate 9S-lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1
Length = 866
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 281 KSFFSTIALAAASSPLGVIGGA------LAGHVVATLLAVLGGSLLGTFLSEKV 328
K+ AL AA SP G+IGGA +AG ++ T A LG S+ +S V
Sbjct: 21 KNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRLRLISATV 74
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,425,601
Number of Sequences: 539616
Number of extensions: 4448473
Number of successful extensions: 13399
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 13306
Number of HSP's gapped (non-prelim): 66
length of query: 336
length of database: 191,569,459
effective HSP length: 118
effective length of query: 218
effective length of database: 127,894,771
effective search space: 27881060078
effective search space used: 27881060078
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)