Query 019756
Match_columns 336
No_of_seqs 361 out of 1387
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 04:17:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019756.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019756hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 2.3E-34 5E-39 268.0 29.3 298 3-331 162-472 (485)
2 KOG0254 Predicted transporter 100.0 1.4E-28 3.1E-33 237.1 26.9 303 2-332 187-502 (513)
3 TIGR00887 2A0109 phosphate:H+ 100.0 3.8E-27 8.3E-32 226.8 22.5 270 16-326 201-501 (502)
4 PF00083 Sugar_tr: Sugar (and 99.9 4.8E-32 1E-36 257.3 -17.3 294 3-328 148-451 (451)
5 TIGR01299 synapt_SV2 synaptic 99.9 1.5E-25 3.2E-30 221.2 24.5 264 16-321 331-741 (742)
6 KOG0253 Synaptic vesicle trans 99.9 5.9E-26 1.3E-30 199.5 19.1 274 6-321 217-527 (528)
7 PRK10077 xylE D-xylose transpo 99.9 3.7E-24 8E-29 204.8 29.9 278 15-333 190-477 (479)
8 TIGR00898 2A0119 cation transp 99.9 2.5E-23 5.3E-28 200.5 21.7 276 4-323 227-504 (505)
9 TIGR00879 SP MFS transporter, 99.9 4E-22 8.6E-27 189.5 27.5 292 3-323 173-480 (481)
10 PRK10642 proline/glycine betai 99.9 4.8E-20 1E-24 177.1 20.8 243 15-320 188-436 (490)
11 KOG0255 Synaptic vesicle trans 99.8 2.9E-18 6.2E-23 166.0 25.2 269 17-327 232-506 (521)
12 KOG0252 Inorganic phosphate tr 99.8 2.3E-20 5E-25 169.0 7.4 268 18-329 224-513 (538)
13 PRK09952 shikimate transporter 99.8 1E-16 2.2E-21 151.9 22.2 234 15-317 195-436 (438)
14 PRK10489 enterobactin exporter 99.8 5.4E-17 1.2E-21 152.8 18.6 251 4-330 161-416 (417)
15 PRK12307 putative sialic acid 99.7 4.8E-16 1E-20 146.5 21.6 250 4-316 153-412 (426)
16 TIGR00903 2A0129 major facilit 99.7 3.4E-16 7.4E-21 144.8 19.9 230 4-310 129-362 (368)
17 PRK10406 alpha-ketoglutarate t 99.7 1E-15 2.2E-20 144.9 22.6 230 15-320 194-429 (432)
18 PRK11551 putative 3-hydroxyphe 99.7 1.1E-15 2.4E-20 143.2 21.2 153 118-310 236-393 (406)
19 COG2271 UhpC Sugar phosphate p 99.7 4.1E-16 9E-21 140.8 17.1 245 11-314 177-435 (448)
20 PRK11663 regulatory protein Uh 99.7 4.6E-16 1E-20 147.3 17.8 260 4-320 162-431 (434)
21 TIGR00891 2A0112 putative sial 99.7 5E-15 1.1E-19 138.1 22.7 234 5-290 152-392 (405)
22 PRK15075 citrate-proton sympor 99.7 6.8E-15 1.5E-19 139.3 21.8 139 117-291 253-397 (434)
23 PRK03893 putative sialic acid 99.7 8.2E-15 1.8E-19 140.9 22.4 145 120-302 293-442 (496)
24 PRK11273 glpT sn-glycerol-3-ph 99.7 2.1E-14 4.6E-19 136.6 23.7 242 15-312 183-434 (452)
25 PRK09556 uhpT sugar phosphate 99.7 1.1E-14 2.4E-19 139.1 20.5 155 118-310 274-446 (467)
26 TIGR00895 2A0115 benzoate tran 99.7 6E-15 1.3E-19 137.0 18.0 238 4-286 156-397 (398)
27 TIGR00893 2A0114 d-galactonate 99.7 7.8E-15 1.7E-19 135.7 18.6 257 4-310 133-396 (399)
28 TIGR00890 2A0111 Oxalate/Forma 99.6 1.2E-14 2.5E-19 134.0 18.8 146 123-306 226-375 (377)
29 TIGR00889 2A0110 nucleoside tr 99.6 7.7E-15 1.7E-19 138.2 16.8 147 138-320 255-409 (418)
30 PRK03545 putative arabinose tr 99.6 6.8E-14 1.5E-18 130.5 22.7 227 4-313 148-380 (390)
31 TIGR00712 glpT glycerol-3-phos 99.6 1.9E-14 4.1E-19 136.4 18.8 251 14-318 180-438 (438)
32 PRK09528 lacY galactoside perm 99.6 1.8E-14 3.8E-19 135.8 18.2 244 4-315 156-405 (420)
33 COG2814 AraJ Arabinose efflux 99.6 4.2E-14 9.1E-19 129.0 19.8 228 3-312 151-385 (394)
34 TIGR00899 2A0120 sugar efflux 99.6 2.2E-14 4.7E-19 132.6 18.2 225 4-309 140-370 (375)
35 TIGR02332 HpaX 4-hydroxyphenyl 99.6 3.6E-14 7.9E-19 133.4 18.2 234 15-300 164-408 (412)
36 PRK05122 major facilitator sup 99.6 1.6E-13 3.5E-18 128.2 21.4 158 121-319 235-394 (399)
37 TIGR00883 2A0106 metabolite-pr 99.6 1.1E-13 2.3E-18 128.3 19.9 215 15-299 166-387 (394)
38 PRK09705 cynX putative cyanate 99.6 1.1E-13 2.4E-18 129.3 19.1 163 118-321 221-389 (393)
39 PRK12382 putative transporter; 99.6 6.4E-13 1.4E-17 124.0 22.8 152 121-312 235-388 (392)
40 PRK15011 sugar efflux transpor 99.6 2.2E-13 4.7E-18 127.3 18.9 153 121-315 235-392 (393)
41 PRK11010 ampG muropeptide tran 99.6 3.2E-13 6.9E-18 129.8 20.3 236 7-312 161-402 (491)
42 PRK09874 drug efflux system pr 99.5 6.8E-13 1.5E-17 124.2 20.0 134 141-314 265-399 (408)
43 TIGR00902 2A0127 phenyl propri 99.5 5.8E-13 1.3E-17 124.0 19.0 228 3-307 142-373 (382)
44 PRK10091 MFS transport protein 99.5 1.7E-12 3.6E-17 120.8 21.1 149 125-313 223-376 (382)
45 TIGR02332 HpaX 4-hydroxyphenyl 99.5 3.7E-13 8.1E-18 126.6 16.5 178 101-318 7-194 (412)
46 TIGR01299 synapt_SV2 synaptic 99.5 7.7E-13 1.7E-17 131.4 19.3 158 118-316 183-357 (742)
47 TIGR00894 2A0114euk Na(+)-depe 99.5 6E-13 1.3E-17 127.1 17.1 253 4-310 182-447 (465)
48 TIGR00881 2A0104 phosphoglycer 99.5 3E-13 6.5E-18 124.6 14.3 233 8-293 139-377 (379)
49 KOG2533 Permease of the major 99.5 1.2E-13 2.7E-18 130.9 10.4 148 3-169 184-348 (495)
50 TIGR00882 2A0105 oligosacchari 99.5 2.1E-12 4.5E-17 120.8 18.6 235 4-310 148-392 (396)
51 TIGR02718 sider_RhtX_FptX side 99.5 3E-12 6.5E-17 119.5 18.7 232 4-307 144-385 (390)
52 TIGR00895 2A0115 benzoate tran 99.5 7.3E-13 1.6E-17 123.0 14.5 161 117-317 32-196 (398)
53 TIGR00710 efflux_Bcr_CflA drug 99.5 9E-13 1.9E-17 122.2 15.0 163 117-319 20-186 (385)
54 PRK11663 regulatory protein Uh 99.5 3.6E-12 7.7E-17 120.7 18.6 168 109-316 30-201 (434)
55 TIGR00900 2A0121 H+ Antiporter 99.5 1.6E-12 3.5E-17 119.3 15.9 214 4-288 143-362 (365)
56 PRK11043 putative transporter; 99.5 8.1E-12 1.8E-16 116.9 20.7 209 4-288 145-356 (401)
57 PRK11128 putative 3-phenylprop 99.5 5.2E-12 1.1E-16 117.5 19.1 228 3-307 142-373 (382)
58 TIGR00710 efflux_Bcr_CflA drug 99.5 6.2E-12 1.4E-16 116.6 19.4 228 4-305 144-376 (385)
59 PRK10054 putative transporter; 99.5 2.4E-12 5.2E-17 120.4 16.6 160 118-317 23-186 (395)
60 TIGR00897 2A0118 polyol permea 99.5 1.1E-11 2.5E-16 116.1 21.1 181 91-311 215-399 (402)
61 TIGR00892 2A0113 monocarboxyla 99.5 4.4E-13 9.5E-18 127.7 11.7 148 120-307 259-415 (455)
62 cd06174 MFS The Major Facilita 99.5 6E-12 1.3E-16 114.6 18.7 153 117-309 190-348 (352)
63 TIGR00893 2A0114 d-galactonate 99.5 1.5E-12 3.3E-17 120.4 14.9 161 118-318 10-174 (399)
64 COG2271 UhpC Sugar phosphate p 99.5 2.6E-12 5.6E-17 116.4 15.5 179 98-316 25-209 (448)
65 PLN00028 nitrate transmembrane 99.4 2.2E-12 4.7E-17 123.6 15.9 158 121-312 271-432 (476)
66 PRK03545 putative arabinose tr 99.4 2.8E-12 6E-17 119.7 16.3 157 121-317 28-188 (390)
67 PRK10504 putative transporter; 99.4 7.6E-12 1.6E-16 119.6 19.5 155 93-288 256-414 (471)
68 PRK11551 putative 3-hydroxyphe 99.4 2.4E-12 5.1E-17 120.6 15.3 160 118-317 31-194 (406)
69 TIGR00792 gph sugar (Glycoside 99.4 2.3E-12 5E-17 121.8 15.2 200 15-288 169-379 (437)
70 PRK11902 ampG muropeptide tran 99.4 1.7E-11 3.6E-16 115.0 20.8 226 12-310 153-387 (402)
71 PRK15402 multidrug efflux syst 99.4 6.5E-12 1.4E-16 117.8 17.9 213 4-288 152-369 (406)
72 PRK10473 multidrug efflux syst 99.4 1.8E-12 3.8E-17 121.0 13.7 171 109-319 10-184 (392)
73 PRK10213 nepI ribonucleoside t 99.4 5.7E-12 1.2E-16 117.8 17.1 157 122-318 40-200 (394)
74 PRK10213 nepI ribonucleoside t 99.4 3.5E-11 7.6E-16 112.5 22.3 221 4-306 159-384 (394)
75 TIGR00711 efflux_EmrB drug res 99.4 1.3E-12 2.8E-17 125.2 12.3 165 114-318 14-182 (485)
76 TIGR00891 2A0112 putative sial 99.4 7.8E-12 1.7E-16 116.6 17.0 172 105-317 15-192 (405)
77 PRK15403 multidrug efflux syst 99.4 5.5E-12 1.2E-16 118.7 15.5 160 119-318 33-196 (413)
78 PRK03699 putative transporter; 99.4 9.6E-12 2.1E-16 116.3 16.8 152 118-310 221-377 (394)
79 COG2814 AraJ Arabinose efflux 99.4 7.5E-12 1.6E-16 114.3 15.5 158 117-314 28-189 (394)
80 PRK14995 methyl viologen resis 99.4 4.7E-12 1E-16 122.0 14.9 175 104-318 8-187 (495)
81 KOG2532 Permease of the major 99.4 7.4E-12 1.6E-16 118.4 15.3 255 5-312 180-446 (466)
82 PRK12307 putative sialic acid 99.4 9.3E-12 2E-16 117.4 16.0 143 117-299 33-179 (426)
83 TIGR00901 2A0125 AmpG-related 99.4 9.2E-12 2E-16 114.6 15.2 208 5-273 135-355 (356)
84 PRK10473 multidrug efflux syst 99.4 6.2E-11 1.3E-15 110.6 21.0 128 4-169 142-274 (392)
85 PRK15402 multidrug efflux syst 99.4 1.5E-11 3.1E-16 115.4 16.6 161 118-318 29-193 (406)
86 PLN00028 nitrate transmembrane 99.4 1.2E-11 2.6E-16 118.6 16.2 156 118-314 52-220 (476)
87 PRK14995 methyl viologen resis 99.4 7.6E-12 1.7E-16 120.5 14.4 243 3-288 145-412 (495)
88 PRK11273 glpT sn-glycerol-3-ph 99.4 1.9E-11 4.2E-16 116.4 16.7 161 120-317 47-212 (452)
89 PRK10077 xylE D-xylose transpo 99.4 2.4E-11 5.2E-16 116.3 17.2 151 138-317 59-218 (479)
90 TIGR00881 2A0104 phosphoglycer 99.4 3.9E-12 8.4E-17 117.2 11.3 160 117-316 10-174 (379)
91 KOG1330 Sugar transporter/spin 99.4 1.8E-12 3.8E-17 118.6 8.5 181 102-322 33-218 (493)
92 PRK10091 MFS transport protein 99.4 1.4E-11 3.1E-16 114.6 14.8 161 118-318 19-183 (382)
93 PF07690 MFS_1: Major Facilita 99.4 4.3E-12 9.3E-17 115.9 11.0 159 118-316 12-175 (352)
94 PRK11102 bicyclomycin/multidru 99.4 1.2E-10 2.6E-15 107.9 20.6 208 4-283 130-343 (377)
95 TIGR00712 glpT glycerol-3-phos 99.4 2.9E-11 6.4E-16 114.6 16.7 171 109-316 34-209 (438)
96 PRK03633 putative MFS family t 99.4 1.6E-10 3.5E-15 107.5 21.2 144 121-307 219-366 (381)
97 PRK11652 emrD multidrug resist 99.3 2.9E-11 6.3E-16 112.9 16.1 160 119-318 25-188 (394)
98 PRK10504 putative transporter; 99.3 2.8E-11 6.1E-16 115.7 16.1 160 117-316 25-188 (471)
99 TIGR00711 efflux_EmrB drug res 99.3 2.2E-11 4.7E-16 116.7 15.4 156 93-288 250-409 (485)
100 PRK11195 lysophospholipid tran 99.3 1.5E-10 3.2E-15 108.3 20.1 237 3-312 138-379 (393)
101 PRK03699 putative transporter; 99.3 3.5E-11 7.6E-16 112.5 15.8 152 118-309 23-179 (394)
102 PRK10489 enterobactin exporter 99.3 1.1E-10 2.3E-15 109.9 18.9 186 91-316 10-199 (417)
103 PRK15034 nitrate/nitrite trans 99.3 1.7E-10 3.6E-15 108.8 19.9 185 90-313 244-454 (462)
104 TIGR00903 2A0129 major facilit 99.3 2.3E-11 5E-16 112.6 14.1 160 118-318 7-170 (368)
105 PRK10054 putative transporter; 99.3 3.9E-11 8.5E-16 112.2 15.6 126 145-310 255-381 (395)
106 PRK09874 drug efflux system pr 99.3 6.3E-11 1.4E-15 110.9 16.9 159 118-317 30-197 (408)
107 PRK11646 multidrug resistance 99.3 5.9E-11 1.3E-15 111.2 16.6 156 121-316 30-188 (400)
108 PRK08633 2-acyl-glycerophospho 99.3 7.3E-11 1.6E-15 124.7 19.0 174 90-307 224-404 (1146)
109 PRK09556 uhpT sugar phosphate 99.3 2.5E-11 5.5E-16 116.0 13.8 177 104-315 31-214 (467)
110 PRK03893 putative sialic acid 99.3 4.4E-11 9.6E-16 115.0 15.6 159 117-316 35-197 (496)
111 PRK11646 multidrug resistance 99.3 1.9E-10 4.1E-15 107.8 19.2 63 245-307 315-382 (400)
112 TIGR00886 2A0108 nitrite extru 99.3 6.8E-11 1.5E-15 109.0 16.0 162 115-316 14-191 (366)
113 TIGR00900 2A0121 H+ Antiporter 99.3 5E-11 1.1E-15 109.4 15.0 158 118-310 15-176 (365)
114 PRK11102 bicyclomycin/multidru 99.3 2.8E-11 6E-16 112.2 12.9 158 120-317 9-170 (377)
115 PRK10406 alpha-ketoglutarate t 99.3 1.2E-10 2.7E-15 110.1 16.7 170 116-318 36-223 (432)
116 PRK11043 putative transporter; 99.3 1.3E-10 2.8E-15 108.7 16.6 156 119-314 23-182 (401)
117 TIGR00890 2A0111 Oxalate/Forma 99.3 2.5E-11 5.4E-16 111.7 11.4 157 118-315 19-179 (377)
118 TIGR00887 2A0109 phosphate:H+ 99.3 2.2E-10 4.7E-15 110.6 18.2 144 138-316 60-227 (502)
119 PF05977 MFS_3: Transmembrane 99.3 3.3E-10 7.2E-15 109.0 19.3 234 3-310 153-391 (524)
120 TIGR00892 2A0113 monocarboxyla 99.3 7.9E-11 1.7E-15 112.3 14.6 174 101-314 18-195 (455)
121 TIGR00894 2A0114euk Na(+)-depe 99.3 3.9E-11 8.6E-16 114.6 12.5 147 132-316 71-222 (465)
122 PRK05122 major facilitator sup 99.3 2.2E-10 4.8E-15 107.1 17.2 156 118-305 31-191 (399)
123 PF07690 MFS_1: Major Facilita 99.3 1.4E-11 3.1E-16 112.4 8.8 210 4-280 136-352 (352)
124 PRK06814 acylglycerophosphoeth 99.3 2.1E-10 4.5E-15 121.3 18.5 242 3-305 158-414 (1140)
125 PRK11195 lysophospholipid tran 99.3 2.2E-10 4.9E-15 107.0 16.4 152 122-317 23-177 (393)
126 PRK15462 dipeptide/tripeptide 99.2 3.1E-10 6.7E-15 108.0 16.6 151 118-307 25-183 (493)
127 COG2223 NarK Nitrate/nitrite t 99.2 2.3E-10 4.9E-15 103.9 14.8 234 7-313 157-401 (417)
128 PRK10642 proline/glycine betai 99.2 4.2E-10 9E-15 108.3 17.3 167 118-317 32-216 (490)
129 TIGR01272 gluP glucose/galacto 99.2 4.3E-10 9.2E-15 101.7 16.3 140 117-299 155-301 (310)
130 PRK15075 citrate-proton sympor 99.2 2E-10 4.2E-15 108.9 14.7 164 104-299 17-198 (434)
131 TIGR00879 SP MFS transporter, 99.2 6.1E-11 1.3E-15 112.6 11.3 159 120-316 46-219 (481)
132 PRK15403 multidrug efflux syst 99.2 2.3E-09 4.9E-14 100.9 21.4 230 4-305 155-389 (413)
133 PRK11652 emrD multidrug resist 99.2 1.2E-09 2.6E-14 102.0 19.3 208 4-288 147-359 (394)
134 cd06174 MFS The Major Facilita 99.2 6.6E-10 1.4E-14 101.1 16.6 153 117-309 14-170 (352)
135 PRK15034 nitrate/nitrite trans 99.2 1.3E-09 2.7E-14 102.9 18.7 181 100-316 32-235 (462)
136 PRK10207 dipeptide/tripeptide 99.2 5.5E-10 1.2E-14 107.2 16.6 140 122-300 35-181 (489)
137 TIGR00896 CynX cyanate transpo 99.2 5.5E-10 1.2E-14 102.8 15.9 130 118-288 213-347 (355)
138 PRK12382 putative transporter; 99.2 3.8E-10 8.2E-15 105.3 14.9 150 118-299 31-185 (392)
139 PF11700 ATG22: Vacuole efflux 99.2 3.1E-09 6.6E-14 101.3 21.1 161 126-319 306-473 (477)
140 TIGR00897 2A0118 polyol permea 99.2 2.7E-10 5.9E-15 106.8 13.4 159 120-314 31-194 (402)
141 TIGR00880 2_A_01_02 Multidrug 99.2 1.8E-10 3.8E-15 90.5 10.0 135 142-316 6-141 (141)
142 PF03825 Nuc_H_symport: Nucleo 99.2 1.8E-09 4E-14 100.7 18.2 188 91-317 200-399 (400)
143 PRK09952 shikimate transporter 99.2 1.2E-09 2.6E-14 103.7 16.9 141 144-317 74-223 (438)
144 TIGR00805 oat sodium-independe 99.2 8.9E-10 1.9E-14 108.9 16.5 183 105-316 36-283 (633)
145 TIGR00899 2A0120 sugar efflux 99.2 9.7E-10 2.1E-14 101.5 15.3 160 120-318 15-181 (375)
146 PF06609 TRI12: Fungal trichot 99.2 2.2E-10 4.7E-15 110.5 11.0 152 120-312 62-216 (599)
147 PRK09584 tppB putative tripept 99.1 1.2E-09 2.7E-14 105.2 16.1 150 118-306 37-194 (500)
148 PRK09705 cynX putative cyanate 99.1 8.2E-10 1.8E-14 103.3 14.4 146 119-305 26-176 (393)
149 TIGR00924 yjdL_sub1_fam amino 99.1 1.1E-09 2.4E-14 104.8 15.4 150 118-307 26-186 (475)
150 PRK09669 putative symporter Ya 99.1 1E-09 2.3E-14 104.2 14.9 161 89-288 220-387 (444)
151 PRK10133 L-fucose transporter; 99.1 2.2E-09 4.9E-14 101.7 16.9 169 91-306 251-426 (438)
152 TIGR00898 2A0119 cation transp 99.1 3E-10 6.4E-15 109.6 10.9 151 123-316 110-266 (505)
153 PRK03633 putative MFS family t 99.1 1.7E-09 3.6E-14 100.7 14.8 133 117-289 21-156 (381)
154 TIGR00885 fucP L-fucose:H+ sym 99.1 2.5E-09 5.5E-14 100.5 16.0 155 118-309 19-203 (410)
155 TIGR00886 2A0108 nitrite extru 99.1 3.9E-10 8.4E-15 103.9 10.1 119 120-275 243-365 (366)
156 PF13347 MFS_2: MFS/sugar tran 99.1 7.6E-09 1.6E-13 97.8 18.7 201 17-288 175-383 (428)
157 PF01306 LacY_symp: LacY proto 99.1 3.1E-10 6.7E-15 104.8 8.9 186 90-319 212-406 (412)
158 TIGR00885 fucP L-fucose:H+ sym 99.1 4.5E-09 9.8E-14 98.8 16.7 151 91-288 225-380 (410)
159 COG2223 NarK Nitrate/nitrite t 99.1 1.5E-09 3.2E-14 98.7 12.7 167 109-314 21-194 (417)
160 PTZ00207 hypothetical protein; 99.1 7.1E-09 1.5E-13 100.6 17.2 163 118-315 43-207 (591)
161 TIGR01301 GPH_sucrose GPH fami 99.1 1.6E-08 3.6E-13 95.9 19.1 152 138-318 309-476 (477)
162 TIGR00901 2A0125 AmpG-related 99.1 3.5E-09 7.6E-14 97.4 14.3 160 120-317 6-182 (356)
163 PRK11010 ampG muropeptide tran 99.1 6.1E-09 1.3E-13 100.2 16.4 162 118-317 28-198 (491)
164 TIGR00788 fbt folate/biopterin 99.1 2.1E-09 4.6E-14 102.7 13.2 128 131-288 282-412 (468)
165 KOG2615 Permease of the major 99.1 5.9E-10 1.3E-14 99.8 8.6 110 138-288 72-181 (451)
166 COG2270 Permeases of the major 99.1 1.9E-08 4.2E-13 91.7 18.3 187 88-319 242-434 (438)
167 KOG0255 Synaptic vesicle trans 99.0 1.8E-09 4E-14 104.7 12.2 137 138-317 122-258 (521)
168 PRK06814 acylglycerophosphoeth 99.0 4.6E-09 1E-13 111.1 15.8 187 93-317 6-198 (1140)
169 PRK08633 2-acyl-glycerophospho 99.0 4.7E-09 1E-13 111.1 15.8 115 138-289 51-165 (1146)
170 TIGR00806 rfc RFC reduced fola 99.0 1.3E-08 2.8E-13 95.2 16.5 157 118-315 42-204 (511)
171 PRK09848 glucuronide transport 99.0 5.8E-09 1.3E-13 99.2 14.2 157 90-288 220-387 (448)
172 COG2211 MelB Na+/melibiose sym 99.0 8.4E-09 1.8E-13 96.4 14.7 162 89-288 227-395 (467)
173 PRK10133 L-fucose transporter; 99.0 8.7E-09 1.9E-13 97.7 15.1 133 118-287 42-177 (438)
174 PRK09528 lacY galactoside perm 99.0 9.8E-09 2.1E-13 96.8 15.2 161 120-316 28-194 (420)
175 COG2807 CynX Cyanate permease 99.0 2.5E-08 5.4E-13 89.1 15.5 221 11-312 156-384 (395)
176 PRK10429 melibiose:sodium symp 99.0 1.3E-08 2.9E-13 97.5 14.7 115 139-288 271-392 (473)
177 TIGR00882 2A0105 oligosacchari 99.0 1.7E-08 3.7E-13 94.3 14.7 165 118-316 18-186 (396)
178 TIGR00883 2A0106 metabolite-pr 98.9 1.6E-08 3.4E-13 93.6 13.9 138 147-317 48-194 (394)
179 PF05977 MFS_3: Transmembrane 98.9 1.4E-08 3.1E-13 97.8 13.6 178 95-311 7-188 (524)
180 KOG2504 Monocarboxylate transp 98.9 3.8E-09 8.2E-14 101.3 9.4 175 92-308 292-471 (509)
181 PRK11902 ampG muropeptide tran 98.9 3.2E-08 7E-13 92.7 15.6 167 113-317 10-185 (402)
182 TIGR01301 GPH_sucrose GPH fami 98.9 4.4E-08 9.5E-13 93.1 15.8 183 106-317 9-222 (477)
183 PRK11462 putative transporter; 98.9 6.1E-08 1.3E-12 92.5 16.7 160 90-288 220-386 (460)
184 PRK15011 sugar efflux transpor 98.9 6.3E-08 1.4E-12 90.5 16.4 158 121-318 34-199 (393)
185 PRK10207 dipeptide/tripeptide 98.9 1.1E-07 2.4E-12 91.4 18.1 144 138-312 313-475 (489)
186 KOG0569 Permease of the major 98.9 4.6E-08 1E-12 92.3 15.1 141 138-316 64-207 (485)
187 COG0738 FucP Fucose permease [ 98.9 1E-07 2.2E-12 86.5 15.6 170 90-306 228-402 (422)
188 TIGR00896 CynX cyanate transpo 98.9 3.4E-08 7.4E-13 90.8 12.6 145 118-304 16-166 (355)
189 KOG0254 Predicted transporter 98.8 2.4E-08 5.2E-13 96.7 11.5 139 137-317 92-233 (513)
190 KOG3764 Vesicular amine transp 98.8 4.1E-09 8.8E-14 95.0 5.4 142 138-319 110-253 (464)
191 TIGR00924 yjdL_sub1_fam amino 98.8 1.6E-06 3.5E-11 83.1 21.4 114 198-314 355-469 (475)
192 PF06609 TRI12: Fungal trichot 98.7 1.2E-06 2.7E-11 84.8 19.0 111 138-286 353-464 (599)
193 TIGR00902 2A0127 phenyl propri 98.7 4.3E-07 9.3E-12 84.6 15.3 148 114-301 16-167 (382)
194 PF06813 Nodulin-like: Nodulin 98.7 1.5E-07 3.2E-12 81.6 10.9 163 115-313 15-181 (250)
195 KOG2532 Permease of the major 98.7 8.8E-08 1.9E-12 90.9 10.1 140 138-315 77-218 (466)
196 PRK09584 tppB putative tripept 98.7 6.5E-07 1.4E-11 86.4 16.2 111 198-311 356-477 (500)
197 KOG2533 Permease of the major 98.7 1.9E-07 4.1E-12 89.1 11.9 141 138-318 85-232 (495)
198 PRK11128 putative 3-phenylprop 98.7 6.8E-07 1.5E-11 83.2 15.3 158 118-316 20-181 (382)
199 TIGR00792 gph sugar (Glycoside 98.6 4.5E-07 9.7E-12 85.7 12.4 161 123-317 21-198 (437)
200 TIGR02718 sider_RhtX_FptX side 98.6 1.6E-06 3.6E-11 80.8 15.6 171 109-315 8-186 (390)
201 KOG4686 Predicted sugar transp 98.6 5.9E-07 1.3E-11 77.8 10.6 130 118-288 280-413 (459)
202 PF00083 Sugar_tr: Sugar (and 98.6 8.3E-10 1.8E-14 104.9 -7.9 141 138-316 50-194 (451)
203 KOG1330 Sugar transporter/spin 98.5 5.6E-08 1.2E-12 89.5 4.0 40 249-288 371-411 (493)
204 KOG0252 Inorganic phosphate tr 98.5 3.7E-07 8E-12 84.0 8.4 112 138-282 88-199 (538)
205 KOG2504 Monocarboxylate transp 98.5 6.9E-07 1.5E-11 85.9 10.4 175 99-314 43-222 (509)
206 COG3104 PTR2 Dipeptide/tripept 98.4 1E-06 2.2E-11 82.2 9.0 162 113-312 36-205 (498)
207 COG0738 FucP Fucose permease [ 98.4 6.3E-06 1.4E-10 75.0 13.2 132 120-288 31-165 (422)
208 TIGR00788 fbt folate/biopterin 98.4 4.5E-06 9.8E-11 79.9 12.3 73 243-317 136-212 (468)
209 PF13347 MFS_2: MFS/sugar tran 98.3 6.8E-06 1.5E-10 77.7 12.6 161 123-315 23-200 (428)
210 KOG2816 Predicted transporter 98.3 9E-06 1.9E-10 77.1 12.7 137 143-322 71-208 (463)
211 TIGR00805 oat sodium-independe 98.3 6.5E-06 1.4E-10 81.6 12.2 40 249-288 540-580 (633)
212 TIGR00889 2A0110 nucleoside tr 98.2 3.2E-05 6.9E-10 73.0 14.7 50 120-169 21-74 (418)
213 KOG2325 Predicted transporter/ 98.2 5.1E-06 1.1E-10 78.2 7.5 144 138-317 75-233 (488)
214 KOG3764 Vesicular amine transp 98.1 2.7E-06 5.8E-11 77.2 4.0 237 3-312 206-453 (464)
215 PRK15462 dipeptide/tripeptide 98.1 0.00047 1E-08 66.1 19.5 86 198-286 351-437 (493)
216 PRK09669 putative symporter Ya 98.1 3.9E-05 8.5E-10 72.9 12.2 155 128-316 36-207 (444)
217 PF01306 LacY_symp: LacY proto 98.1 6.4E-06 1.4E-10 76.5 6.5 54 261-314 136-189 (412)
218 KOG2563 Permease of the major 98.1 4.5E-05 9.7E-10 70.5 11.3 196 88-322 256-459 (480)
219 PF06963 FPN1: Ferroportin1 (F 98.0 0.00051 1.1E-08 64.6 17.7 132 122-283 278-412 (432)
220 PRK10429 melibiose:sodium symp 98.0 0.00016 3.6E-09 69.3 14.7 162 121-316 25-204 (473)
221 PF05631 DUF791: Protein of un 98.0 0.00036 7.7E-09 63.1 15.6 152 127-319 59-222 (354)
222 PRK11462 putative transporter; 98.0 0.0004 8.6E-09 66.4 16.3 155 129-316 37-207 (460)
223 KOG3626 Organic anion transpor 97.9 0.00015 3.2E-09 71.5 13.1 54 234-288 594-648 (735)
224 PTZ00207 hypothetical protein; 97.9 0.00086 1.9E-08 65.6 18.4 187 90-317 345-556 (591)
225 KOG0253 Synaptic vesicle trans 97.9 0.00012 2.6E-09 66.1 10.9 137 138-317 117-254 (528)
226 PF03092 BT1: BT1 family; Int 97.9 1.6E-05 3.4E-10 75.4 5.5 40 249-288 340-379 (433)
227 COG3104 PTR2 Dipeptide/tripept 97.7 0.012 2.6E-07 55.6 20.6 172 118-314 304-488 (498)
228 TIGR00926 2A1704 Peptide:H+ sy 97.6 0.0013 2.8E-08 65.3 14.6 153 126-310 12-179 (654)
229 PF03209 PUCC: PUCC protein; 97.6 0.00076 1.6E-08 62.0 11.4 119 148-293 28-156 (403)
230 KOG2615 Permease of the major 97.6 0.0035 7.5E-08 57.1 15.3 43 246-288 371-413 (451)
231 KOG3762 Predicted transporter 97.6 0.00048 1E-08 65.2 10.0 142 129-310 398-544 (618)
232 KOG2563 Permease of the major 97.6 0.0007 1.5E-08 62.8 10.7 118 138-288 83-201 (480)
233 PF03825 Nuc_H_symport: Nucleo 97.5 0.0022 4.8E-08 60.1 13.2 53 117-169 17-73 (400)
234 PRK09848 glucuronide transport 97.5 0.0037 8.1E-08 59.4 14.9 42 126-167 33-81 (448)
235 PF03137 OATP: Organic Anion T 97.5 2.7E-05 5.8E-10 75.6 0.0 40 249-288 473-513 (539)
236 PF03092 BT1: BT1 family; Int 97.5 0.00088 1.9E-08 63.5 10.1 154 126-316 14-178 (433)
237 PF11700 ATG22: Vacuole efflux 97.4 0.0033 7.1E-08 60.3 13.8 143 139-318 75-252 (477)
238 COG2211 MelB Na+/melibiose sym 97.4 0.0032 6.9E-08 59.5 13.0 162 122-316 32-210 (467)
239 PF03209 PUCC: PUCC protein; 97.4 0.016 3.4E-07 53.6 17.0 156 87-288 197-362 (403)
240 TIGR00806 rfc RFC reduced fola 97.4 0.0022 4.8E-08 60.7 11.2 144 101-282 261-408 (511)
241 KOG2816 Predicted transporter 97.3 0.00068 1.5E-08 64.5 7.1 117 131-288 271-391 (463)
242 COG2807 CynX Cyanate permease 97.3 0.0048 1E-07 55.9 12.0 149 118-308 28-181 (395)
243 PF01770 Folate_carrier: Reduc 97.2 0.003 6.4E-08 58.7 10.6 148 16-164 158-315 (412)
244 KOG3098 Uncharacterized conser 97.0 0.037 8E-07 52.4 15.9 117 138-285 283-410 (461)
245 TIGR00769 AAA ADP/ATP carrier 97.0 0.044 9.6E-07 52.3 16.1 112 148-287 58-189 (472)
246 PF12832 MFS_1_like: MFS_1 lik 96.9 0.0031 6.6E-08 44.3 5.7 59 111-169 9-70 (77)
247 PF05978 UNC-93: Ion channel r 96.8 0.027 5.9E-07 45.3 11.2 106 138-284 41-146 (156)
248 PF03137 OATP: Organic Anion T 96.6 0.00038 8.1E-09 67.7 -1.0 170 115-312 16-249 (539)
249 COG0477 ProP Permeases of the 96.5 0.076 1.6E-06 46.2 13.4 144 120-301 20-173 (338)
250 KOG3626 Organic anion transpor 96.5 0.076 1.6E-06 52.9 14.1 170 119-317 114-346 (735)
251 TIGR01272 gluP glucose/galacto 96.2 0.018 3.8E-07 52.1 7.5 76 243-318 26-119 (310)
252 TIGR00939 2a57 Equilibrative N 95.9 0.034 7.5E-07 52.7 8.1 39 245-283 390-428 (437)
253 KOG0637 Sucrose transporter an 95.7 0.0089 1.9E-07 55.7 3.1 155 101-284 32-200 (498)
254 PF07672 MFS_Mycoplasma: Mycop 95.5 0.15 3.3E-06 44.2 9.9 25 87-111 83-107 (267)
255 PF01770 Folate_carrier: Reduc 95.5 0.3 6.4E-06 45.7 12.5 127 121-288 23-154 (412)
256 PF02487 CLN3: CLN3 protein; 95.3 0.53 1.1E-05 43.9 13.4 51 237-287 345-395 (402)
257 KOG2325 Predicted transporter/ 95.2 0.11 2.4E-06 49.4 8.9 60 248-307 409-469 (488)
258 PF06963 FPN1: Ferroportin1 (F 94.6 1.5 3.2E-05 41.6 14.6 50 262-311 148-198 (432)
259 COG2270 Permeases of the major 94.6 0.91 2E-05 42.4 12.8 126 120-282 37-170 (438)
260 PF03219 TLC: TLC ATP/ADP tran 94.5 3.6 7.8E-05 39.7 17.3 43 246-288 163-205 (491)
261 KOG3810 Micronutrient transpor 94.4 1.4 3E-05 40.2 13.0 65 101-165 233-302 (433)
262 PF01733 Nucleoside_tran: Nucl 94.3 0.012 2.6E-07 53.1 -0.0 40 244-283 265-304 (309)
263 PF00854 PTR2: POT family; In 94.2 0.21 4.6E-06 46.2 8.1 111 198-311 7-121 (372)
264 KOG1479 Nucleoside transporter 93.3 0.3 6.4E-06 45.4 7.1 40 244-283 360-399 (406)
265 KOG3574 Acetyl-CoA transporter 93.1 1.5 3.2E-05 40.6 11.0 42 247-288 389-430 (510)
266 KOG1237 H+/oligopeptide sympor 93.1 3.3 7.1E-05 40.8 14.4 143 140-310 79-242 (571)
267 KOG3574 Acetyl-CoA transporter 92.9 2.5 5.4E-05 39.1 12.1 66 101-169 31-103 (510)
268 PF13000 Acatn: Acetyl-coenzym 92.6 1 2.3E-05 43.0 9.7 61 228-288 406-466 (544)
269 PF06779 DUF1228: Protein of u 92.6 0.37 8.1E-06 34.3 5.3 52 118-169 8-62 (85)
270 PRK03612 spermidine synthase; 91.4 4.5 9.9E-05 39.4 13.0 46 261-306 143-190 (521)
271 COG3202 ATP/ADP translocase [E 90.5 17 0.00036 34.9 15.8 44 245-288 166-209 (509)
272 PF02487 CLN3: CLN3 protein; 86.5 4.8 0.0001 37.7 8.9 129 141-314 66-196 (402)
273 KOG3098 Uncharacterized conser 86.2 9.2 0.0002 36.5 10.7 105 138-283 54-158 (461)
274 KOG3762 Predicted transporter 84.1 0.58 1.3E-05 45.0 1.7 54 116-169 25-81 (618)
275 KOG0637 Sucrose transporter an 80.0 5.6 0.00012 37.7 6.5 32 138-169 336-367 (498)
276 KOG4332 Predicted sugar transp 79.7 5.7 0.00012 35.1 6.0 23 147-169 85-107 (454)
277 KOG4686 Predicted sugar transp 79.4 0.42 9.1E-06 42.4 -1.0 114 138-288 83-197 (459)
278 KOG2881 Predicted membrane pro 79.1 29 0.00064 30.2 9.9 23 147-169 253-275 (294)
279 KOG1479 Nucleoside transporter 77.6 54 0.0012 30.8 12.1 16 117-132 33-48 (406)
280 TIGR00769 AAA ADP/ATP carrier 76.0 78 0.0017 30.5 18.1 78 88-169 254-338 (472)
281 PF13000 Acatn: Acetyl-coenzym 75.4 25 0.00054 34.0 9.4 33 254-286 145-177 (544)
282 COG1422 Predicted membrane pro 72.8 55 0.0012 27.3 13.3 25 17-41 45-70 (201)
283 PF03219 TLC: TLC ATP/ADP tran 71.7 1E+02 0.0022 29.9 15.8 30 140-169 325-354 (491)
284 PF11947 DUF3464: Protein of u 67.1 10 0.00022 30.3 4.2 73 202-278 73-145 (153)
285 PRK10697 DNA-binding transcrip 60.3 15 0.00032 27.9 3.8 12 33-44 57-68 (118)
286 TIGR02978 phageshock_pspC phag 58.2 10 0.00022 29.0 2.6 27 18-44 31-63 (121)
287 TIGR00267 conserved hypothetic 56.4 1.1E+02 0.0023 24.9 11.7 27 141-167 120-146 (169)
288 TIGR00939 2a57 Equilibrative N 56.2 1.4E+02 0.003 28.5 10.6 18 146-163 57-74 (437)
289 COG4262 Predicted spermidine s 55.7 1.8E+02 0.0038 27.1 11.5 42 265-306 141-184 (508)
290 TIGR00880 2_A_01_02 Multidrug 55.2 82 0.0018 23.2 10.1 32 138-169 91-122 (141)
291 COG5336 Uncharacterized protei 52.0 82 0.0018 23.4 6.3 51 258-308 37-90 (116)
292 COG1288 Predicted membrane pro 51.3 93 0.002 29.5 8.1 20 16-35 216-235 (481)
293 PF00854 PTR2: POT family; In 50.7 2E+02 0.0044 26.3 13.4 41 232-272 329-369 (372)
294 TIGR00926 2A1704 Peptide:H+ sy 44.6 3.4E+02 0.0073 27.5 11.6 20 17-36 159-178 (654)
295 PF06123 CreD: Inner membrane 44.0 2E+02 0.0044 27.3 9.4 47 143-212 300-346 (430)
296 PRK11715 inner membrane protei 43.1 2.2E+02 0.0048 27.1 9.5 47 143-212 306-352 (436)
297 KOG3810 Micronutrient transpor 43.0 1.1E+02 0.0023 28.5 7.0 41 248-288 115-155 (433)
298 cd02432 Nodulin-21_like_1 Nodu 41.5 2.2E+02 0.0048 24.2 12.3 47 118-168 149-195 (218)
299 PRK10263 DNA translocase FtsK; 41.0 2E+02 0.0042 31.6 9.5 19 144-162 62-80 (1355)
300 PF12670 DUF3792: Protein of u 39.9 1.6E+02 0.0035 22.1 11.6 40 130-169 30-69 (116)
301 PF06027 DUF914: Eukaryotic pr 37.3 2.8E+02 0.0061 25.4 9.0 9 4-12 17-25 (334)
302 PF01988 VIT1: VIT family; In 35.8 2.7E+02 0.0058 23.5 12.4 48 118-168 144-191 (213)
303 PF11151 DUF2929: Protein of u 35.7 1E+02 0.0022 20.0 4.3 36 8-43 21-56 (57)
304 PF10183 ESSS: ESSS subunit of 35.5 1.1E+02 0.0023 22.7 5.0 29 15-43 56-85 (105)
305 PF04281 Tom22: Mitochondrial 35.2 56 0.0012 25.5 3.6 24 251-274 59-82 (137)
306 COG5336 Uncharacterized protei 34.7 53 0.0011 24.4 3.1 23 147-169 55-78 (116)
307 PF02990 EMP70: Endomembrane p 32.7 4.8E+02 0.01 25.5 11.6 24 142-165 305-328 (521)
308 PF05297 Herpes_LMP1: Herpesvi 32.4 15 0.00032 32.3 0.0 58 261-318 130-190 (381)
309 TIGR00986 3a0801s05tom22 mitoc 31.2 79 0.0017 24.9 3.8 23 251-273 57-79 (145)
310 PF04018 DUF368: Domain of unk 30.2 3.8E+02 0.0082 23.5 16.5 17 89-105 43-59 (257)
311 KOG4332 Predicted sugar transp 29.7 4.1E+02 0.0089 23.9 8.2 40 228-268 346-385 (454)
312 COG3202 ATP/ADP translocase [E 26.0 6.2E+02 0.014 24.6 11.6 22 147-168 335-356 (509)
313 COG3462 Predicted membrane pro 24.2 3.1E+02 0.0067 20.5 5.7 14 53-66 88-101 (117)
314 KOG2601 Iron transporter [Inor 23.4 3.4E+02 0.0073 25.7 6.8 39 266-304 178-217 (503)
315 PF04341 DUF485: Protein of un 22.3 3E+02 0.0065 19.6 8.1 48 109-156 23-71 (91)
316 PF10183 ESSS: ESSS subunit of 21.7 1.4E+02 0.003 22.1 3.5 31 289-319 57-87 (105)
317 KOG3097 Predicted membrane pro 20.9 2.4E+02 0.0052 26.0 5.3 27 143-169 67-93 (390)
318 PRK09609 hypothetical protein; 20.5 6.4E+02 0.014 22.8 12.9 38 17-54 77-116 (312)
319 KOG1237 H+/oligopeptide sympor 20.5 3.4E+02 0.0074 26.9 7.0 39 250-288 481-519 (571)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=268.05 Aligned_cols=298 Identities=29% Similarity=0.474 Sum_probs=249.2
Q ss_pred chhhHHHHHhh------CccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHh-cCCHHHHHHHHHHHhCCCcchHHHHHH
Q 019756 3 TFGCSLAYFFG------NVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVK-IGKEKEFETTLQNLRGKGADISQEAAE 75 (336)
Q Consensus 3 ~~G~~l~~~l~------~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~ 75 (336)
++|.+++..++ ..-.|++.+.+..+++++.++...++|||||||.. +++++||+++++++++++++.++..++
T Consensus 162 ~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~ 241 (485)
T KOG0569|consen 162 VIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEM 241 (485)
T ss_pred HHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHH
Confidence 45666665444 44479999999999999999999999999999987 899999999999999887433333222
Q ss_pred HHHHHHHh-hchhhHHHHHHhhhhh-HHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHH
Q 019756 76 IRDHIEIS-QKHSEARLLNLFQRRY-ANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPA 150 (336)
Q Consensus 76 ~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g 150 (336)
.++..+++ .++++.++.|+++++. ++...+...+...+++++.+...+|...++++.|++.. +.+...++..++.
T Consensus 242 ~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~ 321 (485)
T KOG0569|consen 242 LREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLS 321 (485)
T ss_pred HHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 22222222 2236668899998754 45566677788889999999999999999999999876 7888899999999
Q ss_pred HHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHH
Q 019756 151 VITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVL 230 (336)
Q Consensus 151 ~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (336)
++++.+++||.|||++++. ++.++.+...++.......+... .+..+..+
T Consensus 322 t~~~~~lid~~gRRpLll~----------------------------~~~~~~~~~~~~~~~~~l~~~~~--~~~~y~~i 371 (485)
T KOG0569|consen 322 TLVSPFLIDRLGRRPLLLI----------------------------SLSLMAVALLLMSIALFLSNSFG--SWLSYLCI 371 (485)
T ss_pred HHHHHHHHHhcCCcHHHHH----------------------------HHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHH
Confidence 9999999999999999999 99999998888887766654432 34556667
Q ss_pred HHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHH
Q 019756 231 VGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFV 309 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~ 309 (336)
.....+...++.|.+|+++.+.+|++|++.|+.++++.....|+++++....++.+.+ .+. ..|+.+.+.+.+..+..
T Consensus 372 ~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~ 450 (485)
T KOG0569|consen 372 AAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYL 450 (485)
T ss_pred HHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHH
Confidence 8888888999999999999999999999999999999999999999999999999998 444 88889999999999999
Q ss_pred HhhccCCCCCCHHHHHHHHccc
Q 019756 310 AKIVPETKGRTLEEIQDSIITS 331 (336)
Q Consensus 310 ~~~~~et~~~~~~~~~~~~~~~ 331 (336)
++.+||||+|+.+|+.++++++
T Consensus 451 ~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 451 YRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHhCcccCCCCHHHHHHHHHhC
Confidence 9999999999999998887755
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=1.4e-28 Score=237.13 Aligned_cols=303 Identities=30% Similarity=0.536 Sum_probs=249.9
Q ss_pred cchhhHHHHHhhCcc-----chHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhC-CCcchHHHHHH
Q 019756 2 NTFGCSLAYFFGNVI-----PWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRG-KGADISQEAAE 75 (336)
Q Consensus 2 ~~~G~~l~~~l~~~~-----gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~ 75 (336)
+++|.+++++++... +||+++.+..+++++..+..+++||||+|+.++|+.+++++.++++++ ++.+.+.+.++
T Consensus 187 ~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~ 266 (513)
T KOG0254|consen 187 ITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELEL 266 (513)
T ss_pred HHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHH
Confidence 457888887777544 799999999999999988889999999999999999999999999998 44556666655
Q ss_pred HHHHHHHhh--chhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCc--hhHHHHHHHHHHHHH
Q 019756 76 IRDHIEISQ--KHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASG--SIGSRGIAIIQIPAV 151 (336)
Q Consensus 76 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~g~ 151 (336)
.+.+...+. ...+..+.+++++...++..+...+..++++++.+...+|.+.+++..|.+. .......++..+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t 346 (513)
T KOG0254|consen 267 LKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGT 346 (513)
T ss_pred HHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 552222111 1222246677776678888888999999999999999999999999998875 467778888899999
Q ss_pred HHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhcccc-ccchhHHHHH
Q 019756 152 ITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKN-MNDAAHILVL 230 (336)
Q Consensus 152 ~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 230 (336)
+++.++.||+|||++++. +...+.+++++++.......... ......+..+
T Consensus 347 ~~~~~lvd~~gRr~lll~----------------------------s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (513)
T KOG0254|consen 347 LVATYLVDRFGRRKLLLF----------------------------GAAGMSICLVILAVVGVFALYYPNSSKGAGWLAI 398 (513)
T ss_pred HHHHHHHHHhccHHHHHH----------------------------hHHHHHHHHHHHHHHHHHhccCCCcccchhHHHH
Confidence 999999999999999999 99999999999998776655432 2335567778
Q ss_pred HHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-cchhhhHHHHHHHHHHH-H
Q 019756 231 VGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQWS-SAGTFFIFSGIGFFTVL-F 308 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~i-~ 308 (336)
.....+...++.+..+++|.+.+|.+|.+.|+.+.++.....+..+.+....+....+.. ....|..++..+.+..+ .
T Consensus 399 ~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~f 478 (513)
T KOG0254|consen 399 VFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIF 478 (513)
T ss_pred HHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 888888899999999999999999999999999999999999999998888887777744 36777777777777777 7
Q ss_pred HHhhccCCCCCCHHHHHHHHcccC
Q 019756 309 VAKIVPETKGRTLEEIQDSIITSF 332 (336)
Q Consensus 309 ~~~~~~et~~~~~~~~~~~~~~~~ 332 (336)
.++++||||+++++|+++.+++..
T Consensus 479 v~~~~pETkg~sleei~~~~~~~~ 502 (513)
T KOG0254|consen 479 VFFFVPETKGLTLEEINELFEEGI 502 (513)
T ss_pred heEEcccCCCCcHHHHHHHHHcCC
Confidence 888899999999999998776643
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=3.8e-27 Score=226.82 Aligned_cols=270 Identities=20% Similarity=0.326 Sum_probs=177.1
Q ss_pred cchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHH-HHHHHHHHHhCCCcc-hHHHHHHHHHHHHHhhchhhHHHHH
Q 019756 16 IPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEK-EFETTLQNLRGKGAD-ISQEAAEIRDHIEISQKHSEARLLN 93 (336)
Q Consensus 16 ~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~-~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (336)
++||++|.+.++|+++..+.++++||||||+..++|.+ ++++.+++..+++.+ ..++.++.++ +++..+.++++
T Consensus 201 ~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 276 (502)
T TIGR00887 201 YMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKAST----AVEVPKASWSD 276 (502)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhc----cccchhhhHHH
Confidence 47999999999999998888999999999999888864 577777776543211 1111111111 11112235777
Q ss_pred Hhhhhh---HHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchh---------------HHHHHHHHHHHHHHHHH
Q 019756 94 LFQRRY---ANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSI---------------GSRGIAIIQIPAVITSV 155 (336)
Q Consensus 94 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---------------~~~~~~~~~~~g~~~~~ 155 (336)
+++++. .++..+.....++.....++....+.|.++++.|.+... ......++.+++.++++
T Consensus 277 l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 356 (502)
T TIGR00887 277 FFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTV 356 (502)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776422 112222222222222222344566688888888875420 22334456677889999
Q ss_pred HhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHH
Q 019756 156 LLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMG 235 (336)
Q Consensus 156 ~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (336)
+++||+|||++++. +..+.++++.+++...... . .. ........
T Consensus 357 ~l~dr~gRR~~l~~----------------------------~~~~~~~~~~~l~~~~~~~--~----~~--~~~~~~~~ 400 (502)
T TIGR00887 357 FLVDIIGRKPIQLM----------------------------GFFILTVLFFVLGFAYNHL--S----TH--GFLAIYVL 400 (502)
T ss_pred HHhhhhcchhHHHH----------------------------HHHHHHHHHHHHHHHHHhc--c----hh--HHHHHHHH
Confidence 99999999999887 7767666666555432100 0 01 11122222
Q ss_pred HHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh-----------hcchhhhHHHHHHHH
Q 019756 236 CSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQW-----------SSAGTFFIFSGIGFF 304 (336)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~~ 304 (336)
+..++..+..+..+.+.+|++|++.|+++.|+.+..++++++++|.+.+.+.+. +....++++++++++
T Consensus 401 ~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 480 (502)
T TIGR00887 401 AQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFL 480 (502)
T ss_pred HHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHH
Confidence 233445566677889999999999999999999999999999999999988772 224567888887777
Q ss_pred HHHHHHhhccCCCCCCHHHHHH
Q 019756 305 TVLFVAKIVPETKGRTLEEIQD 326 (336)
Q Consensus 305 ~~i~~~~~~~et~~~~~~~~~~ 326 (336)
+.+. .+++|||+++++||+++
T Consensus 481 ~~i~-~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 481 GILF-TLLIPETKGKSLEELSG 501 (502)
T ss_pred HHHH-heEeccCCCCCHHhhhC
Confidence 7664 46779999999988764
No 4
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=4.8e-32 Score=257.34 Aligned_cols=294 Identities=34% Similarity=0.614 Sum_probs=217.5
Q ss_pred chhhHHHHHhhC----c---cchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHH
Q 019756 3 TFGCSLAYFFGN----V---IPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAE 75 (336)
Q Consensus 3 ~~G~~l~~~l~~----~---~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 75 (336)
.+|.+++..++. . .+||+.+.++++++++..+..+++||||||+..++|.|||++.++++++++.+.++ .++
T Consensus 148 ~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~-~~~ 226 (451)
T PF00083_consen 148 ALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEE-IEE 226 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccceeccccccccccccccccccccccccc-ccc
Confidence 456555555542 2 34999999999999988888899999999999999999999999997665322222 222
Q ss_pred HHHHHHHhhchhhHHHHHHhhhhh-HHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch-hHHHHHHHHHHHHHHH
Q 019756 76 IRDHIEISQKHSEARLLNLFQRRY-ANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS-IGSRGIAIIQIPAVIT 153 (336)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~g~~~ 153 (336)
..++.++.++ ++..++++++++. +++......+....+..+.+...+|.+.++++.+.+.. .......+..+++.+.
T Consensus 227 ~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (451)
T PF00083_consen 227 IKAEKKESQE-SKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLL 305 (451)
T ss_pred cccccccccc-cceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2222111111 1155677777654 45566666666677677777888899999998888877 5666677778888899
Q ss_pred HHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHH
Q 019756 154 SVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGF 233 (336)
Q Consensus 154 ~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
+.+++||+|||++++. +..++++++..++.......... +......+...
T Consensus 306 ~~~~~~~~GRr~~~i~----------------------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~ 355 (451)
T PF00083_consen 306 AIFLIDRFGRRKLLII----------------------------GLLLMAICSLILGIIFFLGVSSS--SWWSILSIVFL 355 (451)
T ss_pred cccccccccccccccc----------------------------ccccccccccccccccccccccc--cccccccceee
Confidence 9999999999999998 77777777666651111111110 11223333444
Q ss_pred HHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhh
Q 019756 234 MGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
..+...++.+..+..+.+++|++|++.|+++.++....+++++++.+.+.+.+.+ .+....+.++++++++..++.+++
T Consensus 356 ~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~ 435 (451)
T PF00083_consen 356 ALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFF 435 (451)
T ss_pred eeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEE
Confidence 4455566777888889999999999999999999999999999999999988877 444778888888888888888999
Q ss_pred ccCCCCCCHHHHHHHH
Q 019756 313 VPETKGRTLEEIQDSI 328 (336)
Q Consensus 313 ~~et~~~~~~~~~~~~ 328 (336)
+||||+++++|+++++
T Consensus 436 lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 436 LPETKGKTLEEIQEMF 451 (451)
T ss_pred EeeCCCCCHHHHHhhC
Confidence 9999999999999864
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.94 E-value=1.5e-25 Score=221.22 Aligned_cols=264 Identities=21% Similarity=0.314 Sum_probs=183.4
Q ss_pred cchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcch---H-HH--HHHHHHHHHH------h
Q 019756 16 IPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADI---S-QE--AAEIRDHIEI------S 83 (336)
Q Consensus 16 ~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~---~-~~--~~~~~~~~~~------~ 83 (336)
.+||+++++.++++++.++.++++||||+|+..++|.++|.+.++++++.+... + +. .++.+..... +
T Consensus 331 ~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (742)
T TIGR01299 331 HSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIE 410 (742)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhccc
Confidence 379999999999999988889999999999999999999999999998654321 1 11 0111110000 0
Q ss_pred hch-----------------hhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHh--------------
Q 019756 84 QKH-----------------SEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKA-------------- 132 (336)
Q Consensus 84 ~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 132 (336)
++. ...+++++++++++++++++..+.++..+ +++.+..|+|.+++..
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~-~yygl~~w~P~~~~~~~~~~~~~~~~~~~~ 489 (742)
T TIGR01299 411 SDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSF-GYYGLSVWFPDMIKHLQADDYAALTKNFPG 489 (742)
T ss_pred ccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 000 01145667777777777766666555444 5778888989875442
Q ss_pred ----------------------------CC-----C--------------------------------------------
Q 019756 133 ----------------------------GA-----S-------------------------------------------- 135 (336)
Q Consensus 133 ----------------------------g~-----~-------------------------------------------- 135 (336)
|. .
T Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~ 569 (742)
T TIGR01299 490 DKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDS 569 (742)
T ss_pred cchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhh
Confidence 00 0
Q ss_pred --------------------c-------hhHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccc
Q 019756 136 --------------------G-------SIGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGY 188 (336)
Q Consensus 136 --------------------~-------~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~ 188 (336)
. .....+.+++.++|.+++++++||+|||+++++
T Consensus 570 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~------------------- 630 (742)
T TIGR01299 570 EFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAG------------------- 630 (742)
T ss_pred hhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH-------------------
Confidence 0 012445567889999999999999999999888
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHH
Q 019756 189 ENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLV 268 (336)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 268 (336)
+.++.+++++++++. ......++.. ++..++..+..+..+++++|++|++.|++++|+.
T Consensus 631 ---------~~~lsai~~ll~~~~-----------~s~~~ll~~~-~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~ 689 (742)
T TIGR01299 631 ---------SMVLSCISCFFLSFG-----------NSESAMIALL-CLFGGLSIAAWNALDVLTVELYPSDKRATAFGFL 689 (742)
T ss_pred ---------HHHHHHHHHHHHHHH-----------ccHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 777777776666532 1111222222 2233333344566789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhccCCCCCCH
Q 019756 269 ILICWSCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIVPETKGRTL 321 (336)
Q Consensus 269 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~~~ 321 (336)
+..+++|++++|.+.+.+.+.+...++++.+++.++++++.+ ++|||+++.+
T Consensus 690 ~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~-~LPET~~~~l 741 (742)
T TIGR01299 690 NALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLAL-KLPDTRGQVL 741 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hCCCCccccc
Confidence 999999999999999988876666777777777777666544 5699998753
No 6
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=5.9e-26 Score=199.51 Aligned_cols=274 Identities=18% Similarity=0.251 Sum_probs=186.5
Q ss_pred hHHHHHhhCccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcc----------h----HH
Q 019756 6 CSLAYFFGNVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGAD----------I----SQ 71 (336)
Q Consensus 6 ~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~----------~----~~ 71 (336)
.+++..+...+||||......+|..+.....+++||||||++.+|+.++|.++++++++.|.. . ++
T Consensus 217 a~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~ 296 (528)
T KOG0253|consen 217 ALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQ 296 (528)
T ss_pred HHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhh
Confidence 344555567789999999988998888999999999999999999999999999999765431 1 11
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhC---C-------------C
Q 019756 72 EAAEIRDHIEISQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAG---A-------------S 135 (336)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~-------------~ 135 (336)
|.....+......++......+++.++.++..++.....+...+. ++........+++.-. . +
T Consensus 297 e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~ 375 (528)
T KOG0253|consen 297 EESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRAN 375 (528)
T ss_pred hhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhc
Confidence 111111111122233445677888777777776655444433332 2233333333332211 0 0
Q ss_pred c------h-hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHH
Q 019756 136 G------S-IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFL 208 (336)
Q Consensus 136 ~------~-~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (336)
. + .-....++..++|.+++++++||+|||+.+.. +.+.++++.+.
T Consensus 376 c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal----------------------------~l~~f~iflfl 427 (528)
T KOG0253|consen 376 CPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMAL----------------------------SLILFGIFLFL 427 (528)
T ss_pred CCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHH----------------------------HHHHHHHHHHH
Confidence 0 0 33456678899999999999999999999877 66666665555
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 209 IGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
..... . .....+..+..-.+.+ +...+.|+|..|++|+..|+++.|.....+++|+++.|.++ ...+
T Consensus 428 l~~c~--~---------rn~~tvllf~arafis-g~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e 494 (528)
T KOG0253|consen 428 LTTCK--T---------RNAYTVLLFTARAFIS-GAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAE 494 (528)
T ss_pred HHHhc--C---------cchhHHHHHHHHHHHh-chheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhc
Confidence 54321 1 1111111222222222 23345689999999999999999999999999999999998 5555
Q ss_pred hhcchhhhHHHHHHHHHHHHHHhhccCCCCCCH
Q 019756 289 WSSAGTFFIFSGIGFFTVLFVAKIVPETKGRTL 321 (336)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~~~ 321 (336)
.+.+.+..+++.+++++.+...++.-|||+|++
T Consensus 495 ~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 495 LSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred cceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 777788889999999999988888779999864
No 7
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.94 E-value=3.7e-24 Score=204.79 Aligned_cols=278 Identities=31% Similarity=0.563 Sum_probs=190.8
Q ss_pred ccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhHHHHHH
Q 019756 15 VIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEARLLNL 94 (336)
Q Consensus 15 ~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (336)
.+|||++|++.+++.++..+..+++||||+|+..+++.+++++..++..+.+. .+++.++.++..+.+++ ..+..
T Consensus 190 ~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~ 264 (479)
T PRK10077 190 TDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL-ATQALQEIKHSLDHGRK----TGGKL 264 (479)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh-HHHHHHHHHHHHHHhhh----hhhhh
Confidence 46999999998888888777788899999999889999988887777754431 12222222111110000 00111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeec
Q 019756 95 FQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVIT 171 (336)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~ 171 (336)
+. ..............+.+..+.+...+|.|.+.++.|.+.. ......++..+++.+++++++||+|||++++.
T Consensus 265 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~-- 341 (479)
T PRK10077 265 LM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQII-- 341 (479)
T ss_pred cc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHH--
Confidence 11 0111112222223344445566777888999888887654 45556777889999999999999999999888
Q ss_pred ccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhh
Q 019756 172 TSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVI 251 (336)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (336)
+..+++++.+.+....... ............+..++..+..+..+.+
T Consensus 342 --------------------------~~~~~~v~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (479)
T PRK10077 342 --------------------------GALGMAIGMFSLGTAFYTQ-------APGIVALLSMLFYVAAFAMSWGPVCWVL 388 (479)
T ss_pred --------------------------hHHHHHHHHHHHHHHHhcC-------cccHHHHHHHHHHHHHHhccccchhHHH
Confidence 7777777776665332111 1112222333334444444455777899
Q ss_pred hcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH-------HhhcchhhhHHHHHHHHHHHHHHhhccCCCCCCHHHH
Q 019756 252 MSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMM-------QWSSAGTFFIFSGIGFFTVLFVAKIVPETKGRTLEEI 324 (336)
Q Consensus 252 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~~~~~~ 324 (336)
++|.+|++.|++++|+.+...++|+.+++.+.+.+. ..++...+++.++++++++++.+++.||+|+++.+|+
T Consensus 389 ~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 468 (479)
T PRK10077 389 LSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEM 468 (479)
T ss_pred hHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHH
Confidence 999999999999999999999999999988887665 2566777888888888888877788899999999999
Q ss_pred HHHHcccCC
Q 019756 325 QDSIITSFA 333 (336)
Q Consensus 325 ~~~~~~~~~ 333 (336)
+++++++..
T Consensus 469 ~~~~~~~~~ 477 (479)
T PRK10077 469 EALWEPETK 477 (479)
T ss_pred HHHHhhccc
Confidence 888877653
No 8
>TIGR00898 2A0119 cation transport protein.
Probab=99.92 E-value=2.5e-23 Score=200.53 Aligned_cols=276 Identities=19% Similarity=0.288 Sum_probs=180.6
Q ss_pred hhhHHHHHhhCcc-chHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVI-PWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGAD-ISQEAAEIRDHIE 81 (336)
Q Consensus 4 ~G~~l~~~l~~~~-gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (336)
+|.++++.++... +||+.|++.+++.++..+..+++||||+|+..+++.+++++.+++..+.+.. ..++..+...+.+
T Consensus 227 ~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 306 (505)
T TIGR00898 227 LGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKD 306 (505)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhh
Confidence 4444544444322 5999999999888888877889999999999999999999988887654322 1111111111111
Q ss_pred HhhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHhhhhc
Q 019756 82 ISQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSIGSRGIAIIQIPAVITSVLLMDKA 161 (336)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~dr~ 161 (336)
.+++.++.+.+++++++..+...+.....++.....++. .+......+.+........++..+++.++.++++||+
T Consensus 307 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~ 382 (505)
T TIGR00898 307 LSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYG----LVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRL 382 (505)
T ss_pred hhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHH----HhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111122346778888777666655444333322211222 2222334455544566677788899999999999999
Q ss_pred CCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhh
Q 019756 162 GRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNS 241 (336)
Q Consensus 162 grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (336)
|||+.+.+ +.++.+++++.+... ++ ...+.. +....+..+..
T Consensus 383 grr~~~~~----------------------------~~~~~~~~~l~~~~~---~~------~~~~~~-~~~~~~~~~~~ 424 (505)
T TIGR00898 383 GRRYTMAA----------------------------SLLLAGVALLLLLFV---PV------DLYFLR-TALAVLGKFGI 424 (505)
T ss_pred CCHHHHHH----------------------------HHHHHHHHHHHHHHc---CC------CchHHH-HHHHHHHHHHH
Confidence 99998887 666666665554432 11 111111 11222222222
Q ss_pred cCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhccCCCCCCH
Q 019756 242 IGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIVPETKGRTL 321 (336)
Q Consensus 242 ~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~~~ 321 (336)
.+..+..+++.+|.+|++.|++++|+.+..+.+|++++|.+.+ +.+.+...++.+++++.++++++. +++|||+++++
T Consensus 425 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~lpet~~~~l 502 (505)
T TIGR00898 425 TSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGILT-LFLPETKGVPL 502 (505)
T ss_pred HHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHHHHH-HcCcCCCCCCC
Confidence 2333566789999999999999999999999999999999998 666667778888888877776654 56799999876
Q ss_pred HH
Q 019756 322 EE 323 (336)
Q Consensus 322 ~~ 323 (336)
+|
T Consensus 503 ~~ 504 (505)
T TIGR00898 503 PE 504 (505)
T ss_pred CC
Confidence 54
No 9
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.91 E-value=4e-22 Score=189.48 Aligned_cols=292 Identities=35% Similarity=0.620 Sum_probs=197.2
Q ss_pred chhhHHHHHhh-------CccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHH
Q 019756 3 TFGCSLAYFFG-------NVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAE 75 (336)
Q Consensus 3 ~~G~~l~~~l~-------~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 75 (336)
.+|..+++.++ ...+||+.|++.++..++..+..+++||+|+++..+++.+++++..++..+.+.+.....++
T Consensus 173 ~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (481)
T TIGR00879 173 TFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDE 252 (481)
T ss_pred HHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHH
Confidence 45666666655 55699999999887777777778889999999888888877777666655433222221111
Q ss_pred H---HHHHHHhhchhhHHHHHHhhhh--hHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHH
Q 019756 76 I---RDHIEISQKHSEARLLNLFQRR--YANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQ 147 (336)
Q Consensus 76 ~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~ 147 (336)
. ......+.+..+..+.+.++.. ..++......+..+..........++.|.+.++.|.+.. .......++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 332 (481)
T TIGR00879 253 LELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVN 332 (481)
T ss_pred HHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Confidence 1 1111111111111133333221 233444444444444454556677888988888888774 5666677788
Q ss_pred HHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHH
Q 019756 148 IPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHI 227 (336)
Q Consensus 148 ~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (336)
+++.++.++++||+|||+.+.. +.++.+++.+.+........... +....+
T Consensus 333 ~~~~~~~g~l~d~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 383 (481)
T TIGR00879 333 FAFTFVAIFLVDRFGRRPLLLI----------------------------GAAGMAICLFVLGILGASFVTGS-SKSSGN 383 (481)
T ss_pred HHHHHHHHHHHHHhcchHHHHH----------------------------HHHHHHHHHHHHHHHhhcccCCc-ccchhH
Confidence 9999999999999999998887 76666666655553222111110 001133
Q ss_pred HHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHH
Q 019756 228 LVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTV 306 (336)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 306 (336)
..+.....+..+++.+..+....+++|.+|++.|+++.++.+...++|++++|.+.+.+.+ .++...|++.++++++++
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 463 (481)
T TIGR00879 384 VAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGL 463 (481)
T ss_pred HHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHH
Confidence 3344445555666666667778888999999999999999999999999999999998887 678888889998888888
Q ss_pred HHHHhhccCCCCCCHHH
Q 019756 307 LFVAKIVPETKGRTLEE 323 (336)
Q Consensus 307 i~~~~~~~et~~~~~~~ 323 (336)
+...++.||+|+++.++
T Consensus 464 i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 464 IFVYFFLPETKGRTLEE 480 (481)
T ss_pred HHHheecccCCCCChhh
Confidence 88778889998876543
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.85 E-value=4.8e-20 Score=177.06 Aligned_cols=243 Identities=14% Similarity=0.165 Sum_probs=141.3
Q ss_pred ccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhHHHHHH
Q 019756 15 VIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEARLLNL 94 (336)
Q Consensus 15 ~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (336)
.+|||++|+++++++++.++++.++||||+|...+++.++..+ + ...+.++.+++++
T Consensus 188 ~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~-------~----------------~~~~~~~~~~~~~ 244 (490)
T PRK10642 188 DWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR-------E----------------GLQDGPKVSFKEI 244 (490)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc-------c----------------cccccccCCHHHH
Confidence 5799999999888777777777889999998543222111000 0 0000112245566
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHH-HhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeee
Q 019756 95 FQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFE-KAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVI 170 (336)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~ 170 (336)
+++ +++.........++ ....++....|.|.+++ ..|.+.. .......++.+++.++.|+++||+|||+.+..
T Consensus 245 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~- 321 (490)
T PRK10642 245 ATK-HWRSLLTCIGLVIA-TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVIL- 321 (490)
T ss_pred HHH-hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH-
Confidence 654 33333322222222 22334556667777764 4577654 34455567788888999999999999997766
Q ss_pred cccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhh
Q 019756 171 TTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFV 250 (336)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (336)
+.+...++...+... ... .......++......+.+. ..+....
T Consensus 322 ---------------------------~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~g~~~~~-~~g~~~~ 365 (490)
T PRK10642 322 ---------------------------GSVALFVLAIPAFIL--INS------NVIGLIFAGLLMLAVILNC-FTGVMAS 365 (490)
T ss_pred ---------------------------HHHHHHHHHHHHHHH--HhC------CCHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 544333222211111 110 0111112222222222221 1233457
Q ss_pred hhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-h-hcchhhhHHHHHHHHHHHHHHhhccCCCCCC
Q 019756 251 IMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-W-SSAGTFFIFSGIGFFTVLFVAKIVPETKGRT 320 (336)
Q Consensus 251 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~i~~~~~~~et~~~~ 320 (336)
+..|++|++.|+++.|+.+..+..++.++|.+.+.+.+ . +++.++++..+.++++.+. .+++||++++.
T Consensus 366 ~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~-~~~~pes~~~~ 436 (490)
T PRK10642 366 TLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT-GVTMKETANRP 436 (490)
T ss_pred HHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH-HHHhccccCCC
Confidence 78899999999999999888888888999999998877 2 3455555555555555554 44569986543
No 11
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.82 E-value=2.9e-18 Score=166.03 Aligned_cols=269 Identities=20% Similarity=0.245 Sum_probs=179.6
Q ss_pred chHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCC---cchHHHHHHH-HHH-HHHhhchhhHHH
Q 019756 17 PWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKG---ADISQEAAEI-RDH-IEISQKHSEARL 91 (336)
Q Consensus 17 gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~-~~~-~~~~~~~~~~~~ 91 (336)
+||+.+++..+++++.++.++..||||||+..+++.+++.+.+++..+.+ .+..++.++. ..+ .+....+++..+
T Consensus 232 ~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (521)
T KOG0255|consen 232 DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISF 311 (521)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCch
Confidence 79999999999999888887788899999999999999999999987543 2222222222 111 111122233557
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHh-HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHhhhhcCCceeeeee
Q 019756 92 LNLFQRRYANSLIIGVGLMLLQQFGGASAMAYY-TSSIFEKAGASGSIGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVI 170 (336)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~ 170 (336)
.++++.+..+...+.....+. .....++ ++......|.+........+....++....+...|+.|||.....
T Consensus 312 ~~l~~~~~l~~~~~~~~~~~~-----~~~~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~- 385 (521)
T KOG0255|consen 312 LDLFRTPRLRYRTLYLLFIWF-----VFSLVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFL- 385 (521)
T ss_pred hhhhcCHHHHHHHHHHHHHHH-----HHhHHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHH-
Confidence 888887754444433333332 2222333 222334456666666777777888999999999999999999988
Q ss_pred cccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhh
Q 019756 171 TTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFV 250 (336)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (336)
+.....++++..++....... +...+...+...+.+.+. ...+.
T Consensus 386 ---------------------------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~ 429 (521)
T KOG0255|consen 386 ---------------------------SLFLAGIGLLLFGWLPDDLGG--------WLHWILPLLGKFFIGSAF-NLIFL 429 (521)
T ss_pred ---------------------------HHHHHHHHHHHHHHhhccchh--------HHHHHHHHHHHHHHHHHH-HHHHH
Confidence 778888888777755322110 111122222222222222 23489
Q ss_pred hhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhccCCCCCCHHHHHHH
Q 019756 251 IMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIVPETKGRTLEEIQDS 327 (336)
Q Consensus 251 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~~~~~~~~~ 327 (336)
+.+|++|+..|..+.+.....+.+|++++|.+............+.+++....+.+.+...++|||+++++.+..++
T Consensus 430 ~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~ 506 (521)
T KOG0255|consen 430 YSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLD 506 (521)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHH
Confidence 99999999999999999999999999999999865555333333334566777777777788999999887654433
No 12
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.81 E-value=2.3e-20 Score=168.99 Aligned_cols=268 Identities=22% Similarity=0.307 Sum_probs=179.8
Q ss_pred hHHHHHHhHHHHHHHHHHHhcCCCChHHHH-hcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchh---hHHHHH
Q 019756 18 WRILALIGVIPCVLQLIGLFFIPESPRWLV-KIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHS---EARLLN 93 (336)
Q Consensus 18 Wr~~f~i~~i~~~i~~~~~~~lpEsp~~l~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 93 (336)
||..|.++.+|+++.+.-++.||||+||-. ..++.++|.+-.++.... +..++ ++. +...+.+ ...+..
T Consensus 224 WRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~--~~~~~----~~~-~~~~~~~~~~~~~F~~ 296 (538)
T KOG0252|consen 224 WRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSV--DIEAE----STA-ESDVPPPSNSFGLFSR 296 (538)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhcccccccc--ccchh----hcc-ccCCCCcccccchHHH
Confidence 999999999999999999999999999952 234444443211111111 01100 000 1111111 112333
Q ss_pred HhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---h---------HHHHHHHHHHHHHHHHHHhhhhc
Q 019756 94 LFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---I---------GSRGIAIIQIPAVITSVLLMDKA 161 (336)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~---------~~~~~~~~~~~g~~~~~~l~dr~ 161 (336)
.+..++. ..++.....++..-...+....+...+++..|+.+. . ...+.....++|..+...++|++
T Consensus 297 ~f~~~hg-~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i 375 (538)
T KOG0252|consen 297 LFLRWHG-KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII 375 (538)
T ss_pred HHHHHHH-HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh
Confidence 4434433 344445555555444466666777778887776654 1 11222333455667777799999
Q ss_pred CCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhh
Q 019756 162 GRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNS 241 (336)
Q Consensus 162 grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (336)
|||+.++. +.+++.+..+.++..+... .......+...+...+..
T Consensus 376 GRk~iq~~----------------------------GF~~~~i~~~~~~~~y~~~-------~~~~Gf~v~y~l~~ff~N 420 (538)
T KOG0252|consen 376 GRKYIQLM----------------------------GFFIMTIFFFVIAGPYNQL-------ENTIGFVVLYSLTFFFGN 420 (538)
T ss_pred hhHHHHHh----------------------------hHHHHHHHHHHHcCCcccc-------cccCceeehHHHHHHHHh
Confidence 99999999 8888888887777543211 122233455556677778
Q ss_pred cCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH------hhcchhhhHHHHHHHHHHHHHHhhccC
Q 019756 242 IGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ------WSSAGTFFIFSGIGFFTVLFVAKIVPE 315 (336)
Q Consensus 242 ~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~i~~~~~~~e 315 (336)
.|.......+.+|.||++.|+++.|+..+++.+|++++...+.++.+ .+...++++++.++++..++. +++||
T Consensus 421 FGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T-~l~pE 499 (538)
T KOG0252|consen 421 FGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFT-LLIPE 499 (538)
T ss_pred cCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhee-EEeec
Confidence 88888889999999999999999999999999999999999998887 355677888888888877754 45589
Q ss_pred CCCCCHHHHHHHHc
Q 019756 316 TKGRTLEEIQDSII 329 (336)
Q Consensus 316 t~~~~~~~~~~~~~ 329 (336)
||+++++|++++.+
T Consensus 500 tk~~~leei~~e~~ 513 (538)
T KOG0252|consen 500 TKGKSLEEISNEEE 513 (538)
T ss_pred ccccCHHHhcChhh
Confidence 99999999865543
No 13
>PRK09952 shikimate transporter; Provisional
Probab=99.76 E-value=1e-16 Score=151.93 Aligned_cols=234 Identities=12% Similarity=0.098 Sum_probs=132.0
Q ss_pred ccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhHHHHHH
Q 019756 15 VIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEARLLNL 94 (336)
Q Consensus 15 ~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (336)
.+|||++|++++++.++..+++..+||||+|...+++.++. +++....+.+
T Consensus 195 ~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~-----------------------------~~~~~~~~~l 245 (438)
T PRK09952 195 SWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA-----------------------------KKRIPVIEAL 245 (438)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc-----------------------------cccCCHHHHH
Confidence 57999999999888877777777899999874322111000 0000011123
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeee
Q 019756 95 FQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVI 170 (336)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~ 170 (336)
++++..+.... ........ ..+....+.|.+. +..|.+.. ......++..+++.++.|+++||+|||+.+..
T Consensus 246 ~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~- 321 (438)
T PRK09952 246 LRHPGAFLKII--ALRLCELL-TMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYIT- 321 (438)
T ss_pred HHchHHHHHHH--HHHHHHHH-HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH-
Confidence 33332222211 11112122 2333444555544 44676665 23344556677788899999999999998776
Q ss_pred cccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhh
Q 019756 171 TTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFV 250 (336)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (336)
+.+...++....... .... ...+..+... .+..+......+..++
T Consensus 322 ---------------------------~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~-~l~~~~~~~~~~~~~~ 366 (438)
T PRK09952 322 ---------------------------GALIGTLSAFPFFMA--LEAQ-----SIFWIVFFSI-MLANIAHDMVVCVQQP 366 (438)
T ss_pred ---------------------------HHHHHHHHHHHHHHH--HHcC-----ChHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 544433332222111 1000 1111111112 2222222222345678
Q ss_pred hhcccCCccchhhhhHHHHHHHH-HHHHHHHHHHHHHHH-h--hcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 251 IMSEIFPINVKASAGSLVILICW-SCSWIVTYTFNFMMQ-W--SSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 251 ~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
+++|.+|++.|+++.++.+..+. +|+.++|.+.+.+.+ . ++...+.+.+++.+++.+.. +.++|++
T Consensus 367 ~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~-~~~~~~~ 436 (438)
T PRK09952 367 MFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA-LLMKDNQ 436 (438)
T ss_pred HHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH-HHccccc
Confidence 99999999999999999777655 899999999999887 3 34556666666666665544 4456654
No 14
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.75 E-value=5.4e-17 Score=152.75 Aligned_cols=251 Identities=12% Similarity=0.020 Sum_probs=159.3
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHh
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEIS 83 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (336)
+|+.++..+....+||+.|++.++..++..+..+.+||+|+. ++.+ + + +.
T Consensus 161 ~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~------------~-~---~~---------- 210 (417)
T PRK10489 161 ISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPP----PQPR------------E-H---PL---------- 210 (417)
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCC----Cccc------------c-c---ch----------
Confidence 456666666666799999999887777777777778876531 0000 0 0 00
Q ss_pred hchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhhh
Q 019756 84 QKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLMD 159 (336)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~d 159 (336)
++..+.++..++++..+...+..+.... ......+.|.+.++ .|.+.. .......++.+++.++.+++.|
T Consensus 211 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~ 284 (417)
T PRK10489 211 -RSLLAGFRFLLASPVVGGIALLGGLLTM-----ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAH 284 (417)
T ss_pred -HHHHHHHHHHHcChHHHHHHHHHHHHHH-----HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 0011123344555544443332222111 22344456666666 677654 4556677788899999999999
Q ss_pred hcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHH
Q 019756 160 KAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAF 239 (336)
Q Consensus 160 r~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
|.++++.+.. +....+++.+.+... .+.+...+....++.
T Consensus 285 ~~~~~~~l~~----------------------------~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~g~- 324 (417)
T PRK10489 285 SARPGLLMLL----------------------------STLGSFLAVGLFGLM-----------PMWILAVLCLALFGY- 324 (417)
T ss_pred ccCcchHHHH----------------------------HHHHHHHHHHHHHcc-----------chHHHHHHHHHHHHH-
Confidence 9777766665 544444444433211 111222222222222
Q ss_pred hhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 240 NSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 240 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
......+...+++.|..|++.||++.|+.+...++|..++|.+.+.+.+ .+....+...+++.++..++....+||+|+
T Consensus 325 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 325 LSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 2222234456788999999999999999999999999999999999998 677778888887777777777788899999
Q ss_pred CCHHHHHHHHcc
Q 019756 319 RTLEEIQDSIIT 330 (336)
Q Consensus 319 ~~~~~~~~~~~~ 330 (336)
++.+|+|++-++
T Consensus 405 ~~~~~~~~~~~~ 416 (417)
T PRK10489 405 FRQTPPEVDASD 416 (417)
T ss_pred cccccccCCCCC
Confidence 988888776543
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.73 E-value=4.8e-16 Score=146.52 Aligned_cols=250 Identities=16% Similarity=0.201 Sum_probs=141.8
Q ss_pred hhhHHHHHh----hCccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHH
Q 019756 4 FGCSLAYFF----GNVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDH 79 (336)
Q Consensus 4 ~G~~l~~~l----~~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 79 (336)
+|.++++.+ .+..|||+.|++..++.++.+......||++++...+.+ .+++..
T Consensus 153 lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~------------~~~~~~---------- 210 (426)
T PRK12307 153 IGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLS------------GKGKHS---------- 210 (426)
T ss_pred HHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhh------------cccccc----------
Confidence 455555443 356799999999776666555555567888765321100 000000
Q ss_pred HHHhhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHH
Q 019756 80 IEISQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVL 156 (336)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~ 156 (336)
+...+..+..+++.++++..+......... +..+........+.|.+.++.|.+.. .......++.+++.++.++
T Consensus 211 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~ 288 (426)
T PRK12307 211 -QSAWSVFSLSMKGLFNRAQFPLTLCVFIVL-FSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGL 288 (426)
T ss_pred -ccchhhhhHHHHHHHhhchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000001122456677666555444332222 22222233455667777777777655 3445666778999999999
Q ss_pred hhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHH
Q 019756 157 LMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGC 236 (336)
Q Consensus 157 l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (336)
+.||+|||+.+.. +.+...+....... .+. ..... +....+
T Consensus 289 l~dr~~~~~~~~~----------------------------~~~~~~~~~~~~~~---~~~-------~~~~~-~~~~~~ 329 (426)
T PRK12307 289 CADRIGLKKTFSI----------------------------GLLMSFLFIFPLFR---IPQ-------DNYLL-LGACLF 329 (426)
T ss_pred HHHHhccHHHHHH----------------------------HHHHHHHHHHHHHH---Hcc-------ccHHH-HHHHHH
Confidence 9999999988776 55444433332221 110 11111 111122
Q ss_pred H-HHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchh-hhHHHHHHHHHHHHHHhhc
Q 019756 237 S-AFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGT-FFIFSGIGFFTVLFVAKIV 313 (336)
Q Consensus 237 ~-~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~-~~~~~~~~~~~~i~~~~~~ 313 (336)
. .....+..+..+.++.|.+|++.|++++|+.+....+++.++|.+.+.+.+ .+.... ++..+..+.++.....+..
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTATILLIIGLSI 409 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhccccC
Confidence 2 122233344556788999999999999999999999999999999999988 443332 3333333333333333344
Q ss_pred cCC
Q 019756 314 PET 316 (336)
Q Consensus 314 ~et 316 (336)
||+
T Consensus 410 ~~~ 412 (426)
T PRK12307 410 PDR 412 (426)
T ss_pred Chh
Confidence 554
No 16
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.73 E-value=3.4e-16 Score=144.77 Aligned_cols=230 Identities=10% Similarity=0.101 Sum_probs=137.7
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHH-HHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVL-QLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i-~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|++++..+...+|||+.|++.++++++ .++.++++||+|++. ++. . +. +
T Consensus 129 l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~---~~~------------~--~~-~----------- 179 (368)
T TIGR00903 129 FALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQA---AEG------------F--GF-K----------- 179 (368)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCC---CCC------------c--ch-H-----------
Confidence 3445555555677999999996655544 455667899998641 100 0 00 0
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHhhhhcC
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSIGSRGIAIIQIPAVITSVLLMDKAG 162 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~dr~g 162 (336)
+..++++++++++..+...+..++ .....+.+..|.|.++++.|.+.. ......+....+.+..++++||..
T Consensus 180 ---~~~~~~~~ll~~~~~~~~~~~~~~----~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g~~~~~d~~~ 251 (368)
T TIGR00903 180 ---DAVKEFGALAGRKDLWIIGAILGF----GVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIGVAVIPDRVA 251 (368)
T ss_pred ---HHHHHHHHHHcChhHHHHHHHHHH----HHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHHHHHhhHHhh
Confidence 001135677777666555443333 333455667889999888777654 333444555566666788999886
Q ss_pred Cce---eeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHH
Q 019756 163 RKP---LLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAF 239 (336)
Q Consensus 163 rr~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
||+ .... ......++.+..... . ...... +.......+
T Consensus 252 r~~~r~~~~~---------------------------~~~~~~a~~~~~~~~----~-------~~~~~~-~~~~~l~~~ 292 (368)
T TIGR00903 252 RAGLRSIYIR---------------------------AAALLIAAFFLALAF----E-------LNRLAL-FAFIGIAGL 292 (368)
T ss_pred hhhhHHHHHH---------------------------HHHHHHHHHHHHHHH----c-------cccHHH-HHHHHHHHH
Confidence 543 2111 011112222211110 0 011111 222222333
Q ss_pred hhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHH
Q 019756 240 NSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 240 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 310 (336)
+..+..+..+++.+|.+|++.|++++|+.+..+++|+..+|.+.+.+.. +....|.++++..+++++...
T Consensus 293 ~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 293 LMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred hhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH
Confidence 3444445567899999999999999999999999999999999887764 555667777777777766653
No 17
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.72 E-value=1e-15 Score=144.86 Aligned_cols=230 Identities=16% Similarity=0.147 Sum_probs=126.3
Q ss_pred ccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhHHHHHH
Q 019756 15 VIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEARLLNL 94 (336)
Q Consensus 15 ~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (336)
.+|||++|+++++++++..+.+..+||+|++.. + + ++++.+++++
T Consensus 194 ~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~------~--~---------------------------~~~~~~~~~l 238 (432)
T PRK10406 194 EWGWRIPFALGAVLAVVALWLRRQLDETSQQET------R--A---------------------------LKEAGSLKGL 238 (432)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhcCCCCchHHH------h--h---------------------------hcccccHHHH
Confidence 579999999999988888777788999886310 0 0 0001235566
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHH-HhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeee
Q 019756 95 FQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFE-KAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVI 170 (336)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~ 170 (336)
++++..+...+. ..+......+.+..|.|.+++ +.|.+.. .......+...++..+.|+++||+|||+.+..
T Consensus 239 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~- 314 (432)
T PRK10406 239 WRNRRAFIMVLG---FTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLC- 314 (432)
T ss_pred HhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHH-
Confidence 655433322221 112112224445667777664 4677654 33444455667777888999999999987665
Q ss_pred cccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhh
Q 019756 171 TTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFV 250 (336)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (336)
+..+.++....+.. ..... ......+. ......+......+..+.
T Consensus 315 ---------------------------~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~ 359 (432)
T PRK10406 315 ---------------------------FGSLAALFTVPILS--ALQNV-----SSPYAAFG-LVMCALLIVSFYTSISGI 359 (432)
T ss_pred ---------------------------HHHHHHHHHHHHHH--HHHcC-----CcHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 43332222211111 11110 01111111 111111111111234567
Q ss_pred hhcccCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHHhh-cchhhhHHHHHHHHHHHHHHhhccCCCCCC
Q 019756 251 IMSEIFPINVKASAGSLVILICWS-CSWIVTYTFNFMMQWS-SAGTFFIFSGIGFFTVLFVAKIVPETKGRT 320 (336)
Q Consensus 251 ~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~i~~~~~~~et~~~~ 320 (336)
+.+|.+|++.|++++|+.+..++. .+...|.+.+.+...+ +...+++.++..+++.+..+ + .++++++
T Consensus 360 ~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~-~-l~~~~~~ 429 (432)
T PRK10406 360 LKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSL-M-LHRKGKG 429 (432)
T ss_pred HHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH-H-hhhcccc
Confidence 899999999999999999988775 3445788777654444 33344445555555544433 3 3444443
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.71 E-value=1.1e-15 Score=143.19 Aligned_cols=153 Identities=10% Similarity=0.082 Sum_probs=101.4
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
......+.|.+.++.|.+.. .......++.+++.++.++++||+|||+.+..
T Consensus 236 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~------------------------- 290 (406)
T PRK11551 236 LYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLL------------------------- 290 (406)
T ss_pred HHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-------------------------
Confidence 34555677888888887664 55666777889999999999999999988765
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+.....++...+... ...+...+ ...+.++...+..+..+++..|.+|++.|+++.|+.+....+
T Consensus 291 ---~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 355 (406)
T PRK11551 291 ---IYAGILASLAALAAA-----------PSFAGMLL-AGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRL 355 (406)
T ss_pred ---HHHHHHHHHHHHHhc-----------CcHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhH
Confidence 444444443333211 11111222 222233333344566678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-h-cchhhhHHHHHHHHHHHHHH
Q 019756 275 CSWIVTYTFNFMMQW-S-SAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 275 g~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~i~~~ 310 (336)
|+.++|.+.+.+.+. + +...+.....+.+++.+..+
T Consensus 356 g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 356 GSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999883 2 23334444444444444333
No 19
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.71 E-value=4.1e-16 Score=140.77 Aligned_cols=245 Identities=16% Similarity=0.211 Sum_probs=154.5
Q ss_pred HhhCccchHHHHHHhHHHHHH-HHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchh--
Q 019756 11 FFGNVIPWRILALIGVIPCVL-QLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHS-- 87 (336)
Q Consensus 11 ~l~~~~gWr~~f~i~~i~~~i-~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 87 (336)
.+..+.+||..|++.++.+++ .++.++.+.|+|+- .|- ..+++.+++.. +..+++++++
T Consensus 177 ~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs---~GL-----P~ie~~~~d~~----------e~~~~~~~~~~l 238 (448)
T COG2271 177 FFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQS---EGL-----PPIEEYRGDPL----------EIYEEEKENEGL 238 (448)
T ss_pred HHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccc---cCC-----CCHHHhhcCch----------hhhhhhccCCCc
Confidence 334556999999997776555 55667778888852 111 11111111110 0001111111
Q ss_pred ---hHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhhhh
Q 019756 88 ---EARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLMDK 160 (336)
Q Consensus 88 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr 160 (336)
+.-.+-.++|+..|.+.+. .+..+..-+.+..|.|.++.+ .|++.. +.....-+++++|.+++||++||
T Consensus 239 s~~~i~~~YVL~Nk~iW~la~a----~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDk 314 (448)
T COG2271 239 TAWQIFVKYVLKNKLIWLLALA----NVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDK 314 (448)
T ss_pred cHHHHHHHHHHcChHHHHHHHH----HHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 1123334556655555443 333333466777777776554 566654 66777778899999999999999
Q ss_pred c--CCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 161 A--GRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 161 ~--grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
. |||....+ +.+....+.+. .+.... ..+..+........+
T Consensus 315 lfkgrR~p~~~------------------------------i~~~~i~~~~~--~~w~~~-----~~~~~l~~~~l~~iG 357 (448)
T COG2271 315 LFKGRRGPMAL------------------------------IFMLLITASLV--LYWLAP-----NGSYLLDAILLFIIG 357 (448)
T ss_pred hcccccchHHH------------------------------HHHHHHHHHHH--HHHcCC-----CccHHHHHHHHHHHH
Confidence 6 67765433 11111111111 111111 123455556666667
Q ss_pred HhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhcc
Q 019756 239 FNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS-CSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
+.-.|...+.-....|..|++..|++.|+...++++ |+..+....+.+.| .+|.+.|++..+.++++.++......
T Consensus 358 f~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 358 FLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred HHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 777777777778899999999999999999999999 88889999898888 69999999999888888776665544
No 20
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.71 E-value=4.6e-16 Score=147.25 Aligned_cols=260 Identities=12% Similarity=0.082 Sum_probs=140.9
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHH-HHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQ-LIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~-~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+...+|||+.|++.++.+++. ++..+++||+|++.......++.+ +. ++..++.+.
T Consensus 162 ~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--------~~-------~~~~~~~~~ 226 (434)
T PRK11663 162 LIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH--------DA-------LELAQQQEG 226 (434)
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc--------cc-------cccchhccc
Confidence 34555555666789999999977765544 445567899886421110000000 00 000000000
Q ss_pred hhchhhHHHH-HHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHh
Q 019756 83 SQKHSEARLL-NLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLL 157 (336)
Q Consensus 83 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l 157 (336)
.+.+.+..++ ..++++..+...+. .+..+.....+..+.|.++ ++.|.+.. .......++..++.++.|++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l 302 (434)
T PRK11663 227 AGLSRKEILTKYVLLNPYIWLLSFS----YVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWG 302 (434)
T ss_pred cCCChhhhHHHHHhcChHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 0000001111 12333333332222 2222223445566777776 44677764 45566778889999999999
Q ss_pred hhhcC--Cceee-eeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHH
Q 019756 158 MDKAG--RKPLL-MVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFM 234 (336)
Q Consensus 158 ~dr~g--rr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (336)
+||++ +|+.. .. ..+...+...... ..+. ...... ....
T Consensus 303 ~dr~~~~~r~~~~~~----------------------------~~~~~~~~~~~~~---~~~~------~~~~~~-~~~~ 344 (434)
T PRK11663 303 SDKLFNGNRGPMNLI----------------------------FAAGILLSVGSLW---LMPF------ASYVMQ-AACF 344 (434)
T ss_pred HHHhccCCccHHHHH----------------------------HHHHHHHHHHHHH---Hccc------ccHHHH-HHHH
Confidence 99983 33322 11 1111111111111 0111 011111 1111
Q ss_pred HHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhc
Q 019756 235 GCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIV 313 (336)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~ 313 (336)
...+++..+.........+|.+|++.|++++|+.+...++|+.++|.+.+.+.+ .++...|.+.++++++.++..+...
T Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 345 FTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred HHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222222222334567899999999999999999999999999999999999 7888888888888888777666665
Q ss_pred cCCCCCC
Q 019756 314 PETKGRT 320 (336)
Q Consensus 314 ~et~~~~ 320 (336)
++.++++
T Consensus 425 ~~~~~~~ 431 (434)
T PRK11663 425 NAQAPRE 431 (434)
T ss_pred hhhchhc
Confidence 5555443
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.69 E-value=5e-15 Score=138.07 Aligned_cols=234 Identities=17% Similarity=0.112 Sum_probs=127.7
Q ss_pred hhHHHHHhhCccc--hHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 5 GCSLAYFFGNVIP--WRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 5 G~~l~~~l~~~~g--Wr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
|+.++..+....+ ||+.|++.+++.++..+....+||+|++..++++.++.++..++..+++.....+
T Consensus 152 ~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 221 (405)
T TIGR00891 152 AAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANI---------- 221 (405)
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhh----------
Confidence 3444444444445 9999999888777777777889999876433222222222222211111000000
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
.++.....++..+ +.+...........+.... ......+.|.+. ++.|.+.. .......++.+++.++.+++.
T Consensus 222 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~ 298 (405)
T TIGR00891 222 -VMTLAAAMVQSAG-KRWPTFVYLVVLVLFANLY-SHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLG 298 (405)
T ss_pred -hhhhhHHhhhhhh-hhhHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000001111111 1111111111111111111 223334445544 45677654 455667788899999999999
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
||+|||+.+.. +.....+...... . .. ...+...+.. .+..
T Consensus 299 dr~g~~~~~~~----------------------------~~~~~~~~~~~~~--~-~~-------~~~~~~~~~~-~~~~ 339 (405)
T TIGR00891 299 DWLGRRKAYVC----------------------------SLLAGQLLIIPVF--A-IG-------ANVAVLGLGL-FFQQ 339 (405)
T ss_pred HHhCchhhhHH----------------------------HHHHHHHHHHHHH--H-hC-------CchHHHHHHH-HHHH
Confidence 99999998776 4443322221111 1 10 1112222221 2223
Q ss_pred HhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 019756 239 FNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WS 290 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~ 290 (336)
+...+..+....+++|.+|++.|++++|+.+....+|+.++|.+.+.+.+ .+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 340 MLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33334455667889999999999999999999999999999999999998 44
No 22
>PRK15075 citrate-proton symporter; Provisional
Probab=99.68 E-value=6.8e-15 Score=139.29 Aligned_cols=139 Identities=15% Similarity=0.179 Sum_probs=85.4
Q ss_pred hhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccc
Q 019756 117 GASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGY 192 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (336)
..+....|.|.++++ .|.+.. .......++.+++.++.|+++||+|||+.+..
T Consensus 253 ~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~----------------------- 309 (434)
T PRK15075 253 SFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIA----------------------- 309 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH-----------------------
Confidence 455677788887766 687655 44556677788999999999999999997765
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHH
Q 019756 193 QYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILIC 272 (336)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 272 (336)
+.....+.... ... ...... ..............+.+ ...+..+.+..|.+|++.|+++.++.+..+
T Consensus 310 -----~~~~~~~~~~~-~~~-~~~~~~-----~~~~~~~~~~~~~~~~g-~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~ 376 (434)
T PRK15075 310 -----FTVLAILTAYP-ALS-WLVAAP-----SFARMLAVELWLSFLYG-SYNGAMVVALTEVMPAEVRTAGFSLAYSLA 376 (434)
T ss_pred -----HHHHHHHHHHH-HHH-HHHcCC-----chHHHHHHHHHHHHHHH-HHHhhHHHHHHHHCCCCccchheeHHHHHH
Confidence 43322221111 100 111110 11111111111111221 223344578899999999999999987766
Q ss_pred HH-HHHHHHHHHHHHHH-hhc
Q 019756 273 WS-CSWIVTYTFNFMMQ-WSS 291 (336)
Q Consensus 273 ~~-g~~~~~~~~~~l~~-~~~ 291 (336)
.. ++.++|.+.+.+.+ .++
T Consensus 377 ~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 377 TAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHHHhhhHHHHHHHHHHhcCC
Confidence 65 58889999999888 443
No 23
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.68 E-value=8.2e-15 Score=140.93 Aligned_cols=145 Identities=10% Similarity=-0.050 Sum_probs=97.4
Q ss_pred HHHHhHHHHHH-HhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 120 AMAYYTSSIFE-KAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 120 ~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
....+.|.+++ +.|.+.. .......++.+++.++.++++||+|||+.+..
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~-------------------------- 346 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVC-------------------------- 346 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH--------------------------
Confidence 34566777774 6777765 56667778889999999999999999988766
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSC 275 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 275 (336)
+..+..+..+..... . ...............+...+..+...+++.|.+|++.|++++|+.+....+|
T Consensus 347 --~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 414 (496)
T PRK03893 347 --SLLISQLLIIPVFAI---G-------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALG 414 (496)
T ss_pred --HHHHHHHHHHHHhhc---c-------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHH
Confidence 444433333222111 0 0111112222222223333444566788999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-hhcchhhhHHHHHH
Q 019756 276 SWIVTYTFNFMMQ-WSSAGTFFIFSGIG 302 (336)
Q Consensus 276 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~ 302 (336)
+.++|.+.+.+.+ .++...+...+...
T Consensus 415 ~~lgp~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 415 GALAPILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 9999999999988 66666665544433
No 24
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.67 E-value=2.1e-14 Score=136.63 Aligned_cols=242 Identities=10% Similarity=0.127 Sum_probs=128.6
Q ss_pred ccchHHHHHHhHHHHHH-HHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhHHH-H
Q 019756 15 VIPWRILALIGVIPCVL-QLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEARL-L 92 (336)
Q Consensus 15 ~~gWr~~f~i~~i~~~i-~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 92 (336)
..|||+.|++.+++.++ .++..+++||+|+....+ ++++.++ +. +++ .++.++++++.+..+ +
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~-------~~---~~~----~~~~~~~~~~~~~~~~~ 247 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLP-PIEEYKN-------DY---PDD----YNEKHEQELTAKQIFMQ 247 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCC-Chhhhhh-------cc---ccc----cccccCCCccHHHHHHH
Confidence 44999999997766555 455667789988642111 1111000 00 000 000000000011111 1
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhhhhc--CCcee
Q 019756 93 NLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLMDKA--GRKPL 166 (336)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~--grr~~ 166 (336)
..++++..+...+..++... ..+....|.|.++++ .|.+.. .......++.+++.+++|+++||+ +||..
T Consensus 248 ~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~ 323 (452)
T PRK11273 248 YVLPNKLLWYIAIANVFVYL----LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGA 323 (452)
T ss_pred HHHcChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcch
Confidence 23444444443333222222 234556677777765 576654 445566677888999999999999 44443
Q ss_pred eeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccc
Q 019756 167 LMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAG 246 (336)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (336)
..+ ..+.+..+..... ..... ...+...+....++.. ..+...
T Consensus 324 ~~~------------------------------~~~~l~~~~~~~~-~~~~~-----~~~~~~~~~~~~~g~~-~~~~~~ 366 (452)
T PRK11273 324 TGV------------------------------FFMTLVTIATIVY-WLNPA-----GNPTVDMACMIVIGFL-IYGPVM 366 (452)
T ss_pred HHH------------------------------HHHHHHHHHHHHH-HHhcc-----cChHHHHHHHHHHHHH-HHhHHH
Confidence 221 1111111111111 11100 0111111222222221 112222
Q ss_pred hhhhhhcccCCccchhhhhHHHHHHHHHHHHH-HHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhh
Q 019756 247 IPFVIMSEIFPINVKASAGSLVILICWSCSWI-VTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 247 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
....+..|.+|++.||++.|+.+...++|+.+ +|.+.+.+.+ .++...|.+.+++++++++....+
T Consensus 367 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 367 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 23456789999999999999999999998765 7999999988 778888888888777776665544
No 25
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.66 E-value=1.1e-14 Score=139.14 Aligned_cols=155 Identities=12% Similarity=0.020 Sum_probs=98.4
Q ss_pred hHHHHHhHHHHHH-HhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 118 ASAMAYYTSSIFE-KAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 118 ~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
......|.|.+++ +.|.+.. .......++.+++.+++|+++||+|||+....
T Consensus 274 ~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~------------------------ 329 (467)
T PRK09556 274 RIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVA------------------------ 329 (467)
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH------------------------
Confidence 4456777887664 4787765 45556677889999999999999999987654
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
......++...... ... ...+...+.... .+....+..........|.+|++.||++.|+.+..++
T Consensus 330 ----~~~~~~~~~~~~~~---~~~------~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~ 395 (467)
T PRK09556 330 ----CIALALIIFTLGVY---QHA------TSEYMYLASLFA-LGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAY 395 (467)
T ss_pred ----HHHHHHHHHHHHHH---Hhc------CcHHHHHHHHHH-HHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Confidence 32222222111111 110 111122122222 2222222222223567799999999999999999999
Q ss_pred H-HHHHHHHHHHHHHH-------------hhcchhhhHHHHHHHHHHHHHH
Q 019756 274 S-CSWIVTYTFNFMMQ-------------WSSAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 274 ~-g~~~~~~~~~~l~~-------------~~~~~~~~~~~~~~~~~~i~~~ 310 (336)
+ |+.++|.+.+.+.+ .+|...|.+.+++.+++.+...
T Consensus 396 l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 396 LFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 7 77999999999988 3466777777776766655443
No 26
>TIGR00895 2A0115 benzoate transport.
Probab=99.65 E-value=6e-15 Score=137.04 Aligned_cols=238 Identities=19% Similarity=0.193 Sum_probs=133.9
Q ss_pred hhhHHHHHhhCccchHHHHHHhH-HHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGV-IPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~-i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+.+..|||+.|++.+ +..+...+..+++||+|++...+ +.+++++..++......+.+++ +.. +.+.
T Consensus 156 ~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~ 231 (398)
T TIGR00895 156 VGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQS--ALP-EQKA 231 (398)
T ss_pred HHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccccc--ccc-cccc
Confidence 44555555556779999999975 44445556677889999876554 4444444433332211110000 000 0000
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMD 159 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~d 159 (336)
+++..+...+..++++..+.......... ...........+.|.+.++.|.+.. .......++.+++.++.++++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (398)
T TIGR00895 232 TQGTKRSVFKALFQGKTARITVLLWLLYF-MLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLAD 310 (398)
T ss_pred ccchhhHHHHHHhcchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 01111122333343333333332222222 2223355566777877888887765 5556677788999999999999
Q ss_pred hcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHH
Q 019756 160 KAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAF 239 (336)
Q Consensus 160 r~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
|+|||+.... .....+....+... . ...+...+.... .+.
T Consensus 311 ~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~-~g~ 350 (398)
T TIGR00895 311 RLGPRVTALL-----------------------------LLLGAVFAVLVGST---L-------FSPTLLLLLGAI-AGF 350 (398)
T ss_pred hcchHHHHHH-----------------------------HHHHHHHHHHHHHH---h-------hCHHHHHHHHHH-HHH
Confidence 9999943322 22222222222210 0 111122222222 222
Q ss_pred hhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 019756 240 NSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFM 286 (336)
Q Consensus 240 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 286 (336)
...+..+...+++.|.+|++.|+++.|+.+....+|..++|.+.+.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 351 FVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 22233456678999999999999999999999999999999998864
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.65 E-value=7.8e-15 Score=135.72 Aligned_cols=257 Identities=15% Similarity=0.149 Sum_probs=141.8
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHHH-HHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQLI-GLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~-~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+....+||+.|++.++..++..+ ..+..||+|+... ..++++..+..++...+ .+.++
T Consensus 133 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~~~~ 199 (399)
T TIGR00893 133 IGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK-WLTEEEKYIVVGGLLAE------------QQGKG 199 (399)
T ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccc-cCCHHHHhhcchhhccc------------ccccc
Confidence 3444445555667999999997776665544 4455677663100 00111100000000000 00011
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHH-HhCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFE-KAGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
+++.++...++.++++..+...+..+.. .........+.|.+.+ ..|.+.. .......+..+++.++.++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 275 (399)
T TIGR00893 200 PSTPKKYQIKELLKDRRVWGLALGQFLV----NIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLS 275 (399)
T ss_pred ccCCCccchHHHhcCHHHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1122233455666665544433332222 2234455556666554 4566544 556667788899999999999
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
||++||+..... ......++.............. ...+. .+.... ..
T Consensus 276 ~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~-~~ 322 (399)
T TIGR00893 276 DLLLRRGKSLVF---------------------------ARKTAIIAGLVLSLLMFATNYV----NIPYA-ALALVA-LG 322 (399)
T ss_pred HHHhhcccchhH---------------------------HHHHHHHHHHHHHHHHHHhccc----hhHHH-HHHHHH-HH
Confidence 999999732220 1111122211111111111100 11111 222222 22
Q ss_pred HhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hh-cchhhhHHHHHHHHHHHHHH
Q 019756 239 FNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WS-SAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~-~~~~~~~~~~~~~~~~i~~~ 310 (336)
+...+..+..+++.+|.+|++.|+++.|+.+...++|+.++|.+.+.+.+ .+ +...+.+.+++.+++.+..+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 323 FFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 33333567788999999999999999999999999999999999999988 55 67777777777666655443
No 28
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.65 E-value=1.2e-14 Score=134.00 Aligned_cols=146 Identities=14% Similarity=0.017 Sum_probs=100.5
Q ss_pred HhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhh
Q 019756 123 YYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISA 199 (336)
Q Consensus 123 ~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (336)
.+.+.+.++.+.+.. .......+..+++.+..++++||+|||+.+.. +.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~----------------------------~~ 277 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSI----------------------------VF 277 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH----------------------------HH
Confidence 334445566776654 45566777889999999999999999998877 66
Q ss_pred hhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHH
Q 019756 200 CGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIV 279 (336)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 279 (336)
....++...+... ++ ............ .+.......+....+++|.+|+++|+++.|+.+....+|+.++
T Consensus 278 ~~~~~~~~~~~~~---~~------~~~~~~~~~~~~-~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 347 (377)
T TIGR00890 278 GISAVGMAAMLFI---PM------LNDVLFLATVAL-VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFG 347 (377)
T ss_pred HHHHHHHHHHHHc---cc------chhHHHHHHHHH-HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHH
Confidence 6666655544321 10 111111111222 2222223334556789999999999999999999999999999
Q ss_pred HHHHHHHHH-hhcchhhhHHHHHHHHHH
Q 019756 280 TYTFNFMMQ-WSSAGTFFIFSGIGFFTV 306 (336)
Q Consensus 280 ~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 306 (336)
|.+.+.+.+ .++...+.+.+++.+++.
T Consensus 348 ~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 348 GLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 999999887 777777777776665543
No 29
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.64 E-value=7.7e-15 Score=138.20 Aligned_cols=147 Identities=13% Similarity=0.058 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
.......+..+++.+..++++||+|||+++.. +.+..+++..+.... .
T Consensus 255 ~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~----------------------------~~~~~~v~~~l~~~~----~ 302 (418)
T TIGR00889 255 IWMSLSQFSEIFFILTIPFFLKRFGIKKVMLL----------------------------SLVAWALRFGFFAYG----D 302 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH----------------------------HHHHHHHHHHHHHHc----C
Confidence 45556666788889999999999999999888 666666655444321 0
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHH-HHHHHHHHHHHHHHHHHHH-h------
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVI-LICWSCSWIVTYTFNFMMQ-W------ 289 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~-~------ 289 (336)
.. ......++....+.+.......+....+++|.+|++.|+++.|+.+ ....+|..++|.+.+.+.+ .
T Consensus 303 ~~----~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~ 378 (418)
T TIGR00889 303 PE----YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTF 378 (418)
T ss_pred cc----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCC
Confidence 00 1111112222222222222233455688999999999999999997 5677899999999999988 2
Q ss_pred hcchhhhHHHHHHHHHHHHHHhhccCCCCCC
Q 019756 290 SSAGTFFIFSGIGFFTVLFVAKIVPETKGRT 320 (336)
Q Consensus 290 ~~~~~~~~~~~~~~~~~i~~~~~~~et~~~~ 320 (336)
+|...|.+.+++.+++.++.+++.+|++++-
T Consensus 379 ~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 379 DWQTMWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 3567788888888888888888889887654
No 30
>PRK03545 putative arabinose transporter; Provisional
Probab=99.63 E-value=6.8e-14 Score=130.51 Aligned_cols=227 Identities=15% Similarity=0.058 Sum_probs=136.5
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHH-HHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQL-IGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~-~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+.+.+|||++|++.++.+++.. .....+||.|+ ++.
T Consensus 148 ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~-----~~~------------------------------ 192 (390)
T PRK03545 148 LGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS-----EHS------------------------------ 192 (390)
T ss_pred HHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC-----CCc------------------------------
Confidence 455566666677899999999777666554 34455677542 000
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHH-HHHhCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSI-FEKAGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
++.++.++.++++..+......+...... .....+.+.+ .+..|.+.. ......+++.+++.++.++++
T Consensus 193 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~ 265 (390)
T PRK03545 193 ---GSLKSLPLLFRRPALVSLYLLTVVVVTAH----FTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLG 265 (390)
T ss_pred ---chHHHHHHHHhCcHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00112345566665544433322222221 1222333433 444576655 455667778899999999999
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
||++||... . +......+....... . ...+...+ ...+.+
T Consensus 266 dr~~~~~~~-~----------------------------~~~~~~~~~~~l~~~---~-------~~~~~~~~-~~~l~g 305 (390)
T PRK03545 266 NRHPSGFLL-I----------------------------AIALLLVCLLLLLPA---A-------NSEWHLSV-LSIFWG 305 (390)
T ss_pred hccchhHHH-H----------------------------HHHHHHHHHHHHHHH---h-------chHHHHHH-HHHHHH
Confidence 999988643 3 323232332222111 0 11122222 222223
Q ss_pred HhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhc
Q 019756 239 FNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIV 313 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~ 313 (336)
....+..+.....+.|..| +.|++++|+.+...++|..++|.+.+.+.+ .++...+.+.+.+.+++.+..+...
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 3333333445567778777 588999999999999999999999999998 8888888888888888777666554
No 31
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.63 E-value=1.9e-14 Score=136.44 Aligned_cols=251 Identities=10% Similarity=0.096 Sum_probs=137.7
Q ss_pred CccchHHHHHHhHHHHHHH-HHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhHH-H
Q 019756 14 NVIPWRILALIGVIPCVLQ-LIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEAR-L 91 (336)
Q Consensus 14 ~~~gWr~~f~i~~i~~~i~-~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 91 (336)
...+||+.|++.++.+++. ++.++++||+|+....+ +.++. +.+..+..+ ++ .+.+.+.+.. .
T Consensus 180 ~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~------~~-~~~~~~~~~~~~ 244 (438)
T TIGR00712 180 WFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLP-PIEEY-------RNDYPDDYN------EK-AEQELTAKEIFM 244 (438)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCC-Cchhc-------ccccccccc------cc-cccccchHHHHH
Confidence 3468999999977776654 45566789988642100 00000 000000000 00 0000001111 1
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceee
Q 019756 92 LNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLL 167 (336)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l 167 (336)
+..++++..+...+...+.. ...+....|.|.++++ .|.+.. +......+..+++.+++++++||+++++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 320 (438)
T TIGR00712 245 QYVLPNKLLWYIAIANVFVY----LLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG 320 (438)
T ss_pred HHHccCchHHHHHHHHHHHH----HHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc
Confidence 23445554444433322222 2234555677777765 576654 556667778899999999999999755433
Q ss_pred eeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccch
Q 019756 168 MVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGI 247 (336)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (336)
.. +............... .... ...+........ .+....+....
T Consensus 321 ~~----------------------------~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~-~g~~~~~~~~~ 365 (438)
T TIGR00712 321 AT----------------------------GVFFMTLVTIAVIVYW-MNPA-----GNPLVDMICMIV-IGFLIYGPVML 365 (438)
T ss_pred HH----------------------------HHHHHHHHHHHHHHHH-hcCC-----CchHHHHHHHHH-HHHHHccHHHH
Confidence 33 3222222111111111 1110 111211111111 11111221122
Q ss_pred hhhhhcccCCccchhhhhHHHHHHHHHHH-HHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 248 PFVIMSEIFPINVKASAGSLVILICWSCS-WIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 248 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
......|.+|++.|+++.|+.+...++|+ .++|.+.+.+.+ .++...+.+.+++.+++.+...+..||.|+
T Consensus 366 ~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 366 IGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 23467899999999999999999988875 689999999988 678888888888888888877788887663
No 32
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.63 E-value=1.8e-14 Score=135.81 Aligned_cols=244 Identities=15% Similarity=0.092 Sum_probs=136.4
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHHHHHhcC-CCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQLIGLFFI-PESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~l-pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|++++..+.. .+||++|++.++.+++..+..+++ ||.|+-. ++.++. + ++
T Consensus 156 i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----------------------~--~~ 207 (420)
T PRK09528 156 LCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTA---KVANAL----------------------G--AN 207 (420)
T ss_pred HHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchh---hhccch----------------------h--cc
Confidence 45555555543 489999999887777666555554 3433200 000000 0 00
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMD 159 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~d 159 (336)
+++.+.+..++.++++..+...+..................|......+.+.+.. .......+...++.+.+++++|
T Consensus 208 ~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~d 287 (420)
T PRK09528 208 ASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIIN 287 (420)
T ss_pred cccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111122344556665544433322222111111111223333333333344332 4445556677899999999999
Q ss_pred hcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHH
Q 019756 160 KAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAF 239 (336)
Q Consensus 160 r~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
|+|||+.+.. +.++..++..+.++. .+.+..... ..+.+.
T Consensus 288 r~g~~~~~~~----------------------------~~~l~~~~~~l~~~~-----------~~~~~~~~~-~~l~g~ 327 (420)
T PRK09528 288 RIGAKNALLL----------------------------AGTIMAVRIIGSGFA-----------TGPLEVSIL-KLLHAF 327 (420)
T ss_pred HhCcchhhHH----------------------------HHHHHHHHHHHHHhc-----------ccHHHHHHH-HHHHHH
Confidence 9999998777 666555555554421 111222222 222222
Q ss_pred hhcCccchhhhhhcccCCccchhhhhHH-HHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccC
Q 019756 240 NSIGLAGIPFVIMSEIFPINVKASAGSL-VILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPE 315 (336)
Q Consensus 240 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~e 315 (336)
......+....++.|.+|++.|++..+. .+....+|..++|.+.+.+.+ .++...|...+++.++..++.....++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 328 EVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1111123345778899999999988766 567788999999999999998 788888888888877776665555544
No 33
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.63 E-value=4.2e-14 Score=128.96 Aligned_cols=228 Identities=17% Similarity=0.136 Sum_probs=151.0
Q ss_pred chhhHHHHHhhCccchHHHHHHhHHHHHHHH-HHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHH
Q 019756 3 TFGCSLAYFFGNVIPWRILALIGVIPCVLQL-IGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIE 81 (336)
Q Consensus 3 ~~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~-~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
.+|..++.++++.+|||..|++.+..+++.. ..+..+| |+- + .
T Consensus 151 v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~-----~-----------------------------~ 194 (394)
T COG2814 151 VLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSE-----I-----------------------------S 194 (394)
T ss_pred HHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--Ccc-----C-----------------------------C
Confidence 5788999999999999999999887777765 5567788 310 0 0
Q ss_pred HhhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 82 ISQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
++.+.+..+..+.++++..+..++...+.+..+ +..+.|..|.+.+..|++.+ +....++++.++|.+++|++.
T Consensus 195 ~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~---F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~ 271 (394)
T COG2814 195 GSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGH---FALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLA 271 (394)
T ss_pred CCCCcchhHHHHHhcCchHHHHHHHHHHHHcch---hhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 011122233456677777666665554444433 33445556666666787775 788889999999999999999
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
|| +.|+.+.. ...++++....+.+. . .+.+..+..... .
T Consensus 272 dr-~~~~~l~~----------------------------~~~l~a~~~l~l~~~---~-------~~~~~~~~~~~~--w 310 (394)
T COG2814 272 DR-GPRRALIA----------------------------ALLLLALALLALTFT---G-------ASPALALALLFL--W 310 (394)
T ss_pred cc-cchhHHHH----------------------------HHHHHHHHHHHHHHh---c-------chHHHHHHHHHH--H
Confidence 99 87777666 445555544444322 1 112222222222 2
Q ss_pred HhhcCccchhhhhhcccCC--ccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhh
Q 019756 239 FNSIGLAGIPFVIMSEIFP--INVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p--~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
+ ....+....+..++.+ ++.+..+.+++....++|..++..+.+.+.+ .++....++.+.+.+++.++....
T Consensus 311 g--~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 311 G--FAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred H--HHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2222333344444433 5789999999999999999999999999999 777777888888777777665444
No 34
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.62 E-value=2.2e-14 Score=132.64 Aligned_cols=225 Identities=16% Similarity=0.191 Sum_probs=129.6
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHHHH-HhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQLIG-LFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~-~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+.+.+|||+.|++.+++.++..+. ++++||+|+.. .++ +
T Consensus 140 ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----------~----------------- 187 (375)
T TIGR00899 140 IGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGA-----PGA----------L----------------- 187 (375)
T ss_pred HhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCc-----ccc----------c-----------------
Confidence 45555666666789999999988776665544 45689877421 000 0
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHH-HHHhCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSI-FEKAGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
++.+.++.++++..+......+.... .......+.|.+ .++.|.+.. ..........+++.++.+++.
T Consensus 188 ----~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 259 (375)
T TIGR00899 188 ----TRLEVRGLLASRDTRLLFVACTLMWG----CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLI 259 (375)
T ss_pred ----CcchhhhhhcCcchHHHHHHHHHHHH----HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 00011223334433333332222222 122223334444 355677665 223333445667788999999
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
||+|||+.+.. +.+...+........ ...+.........+.
T Consensus 260 ~r~g~~~~~~~----------------------------~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~g~ 300 (375)
T TIGR00899 260 KRFGKRRLMLL----------------------------AALAGVAFYTGLAAD-----------NSLWALLMLQLLNAI 300 (375)
T ss_pred HHhcchhHHHH----------------------------HHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHH
Confidence 99999997766 444333332222110 111222222222122
Q ss_pred HhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHH
Q 019756 239 FNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFV 309 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~ 309 (336)
+.+ ...+....+..|..|++ ++++.++.+...++|..++|.+.+.+.+ .++...+.+.+++.+++.+..
T Consensus 301 ~~g-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 301 FIG-ILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHH-HHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Confidence 222 22345567888988865 6699999999999999999999999888 677778888777776666543
No 35
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.61 E-value=3.6e-14 Score=133.40 Aligned_cols=234 Identities=15% Similarity=0.185 Sum_probs=125.4
Q ss_pred ccchHHHHHHhHHHHHHH-HHHHhcCCCChH---HHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhHH
Q 019756 15 VIPWRILALIGVIPCVLQ-LIGLFFIPESPR---WLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEAR 90 (336)
Q Consensus 15 ~~gWr~~f~i~~i~~~i~-~~~~~~lpEsp~---~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (336)
..|||+.|++.++++++. .+.++++||+|+ |+. .++.+...++.++++.+.++.. +..+++....+..
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 235 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLD----EEDKKALKEMIDNDQLTLEQPE----GAFAHAAMPQRSM 235 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCC----HHHHHHHHHHHHhccccccccc----cccccccccHHHH
Confidence 369999999987776654 445677899985 221 1111111111111110000000 0000000011122
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHh--CCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCce
Q 019756 91 LLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKA--GASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKP 165 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~ 165 (336)
++++++ +..+ ......+........+..|.|.++++. +.+.. .......++.++|.++.++++||++||+
T Consensus 236 ~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 236 LREIFT-PAIM----LYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK 310 (412)
T ss_pred HHHhcC-hHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH
Confidence 333332 2222 222223333334666778899988875 33332 4567777889999999999999999877
Q ss_pred eeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCcc
Q 019756 166 LLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLA 245 (336)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (336)
..... ......++. .+. .. .. . .......... .........
T Consensus 311 ~~~~~---------------------------~~~~~~~~~-~~~--~~-~~------~-~~~~~~~~~~-~~~g~~~~~ 351 (412)
T TIGR02332 311 HHTAL---------------------------PYLFAAAGW-LLA--SA-TD------H-NLIQLLGIIM-ASMGSFSAM 351 (412)
T ss_pred HHHHH---------------------------HHHHHHHHH-HHH--Hh-cC------C-HHHHHHHHHH-HHHHhhhhh
Confidence 43220 222222221 111 10 10 1 1111111111 111111223
Q ss_pred chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-h-hcchhhhHHHH
Q 019756 246 GIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-W-SSAGTFFIFSG 300 (336)
Q Consensus 246 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~-~~~~~~~~~~~ 300 (336)
+..+....|.+|++.|+++.|+.+..+++|++++|.+.+.+.+ . ++...+.+.++
T Consensus 352 ~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~ 408 (412)
T TIGR02332 352 AIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAA 408 (412)
T ss_pred hHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHH
Confidence 3445666788999999999999999999999999999999888 3 46666665554
No 36
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.60 E-value=1.6e-13 Score=128.24 Aligned_cols=158 Identities=13% Similarity=0.049 Sum_probs=104.3
Q ss_pred HHHhHHHHHHHhCCCch-hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhh
Q 019756 121 MAYYTSSIFEKAGASGS-IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISA 199 (336)
Q Consensus 121 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (336)
...+.+.+.++.+.+.. .......++.+++.+..+++.||+|||+.+.. +.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~----------------------------~~ 286 (399)
T PRK05122 235 IATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIV----------------------------SL 286 (399)
T ss_pred HHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH----------------------------HH
Confidence 34455555555565332 45556677788899999999999999988776 55
Q ss_pred hhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHH
Q 019756 200 CGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIV 279 (336)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 279 (336)
....++....... .+.+...+...+.+.+.+ ...+.......|.+|++.|+++.|+.+....+|..++
T Consensus 287 ~~~~~~~~~~~~~-----------~~~~~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 354 (399)
T PRK05122 287 LVEILGLLLLWLA-----------PSPWMALIGAALTGFGFS-LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGIT 354 (399)
T ss_pred HHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555554444321 111222222222222222 2234444667788999999999999999999999999
Q ss_pred HHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCCC
Q 019756 280 TYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKGR 319 (336)
Q Consensus 280 ~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~ 319 (336)
+.+.+.+.+ .++...+.+.+++.+++.+...++ ++++++
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 394 (399)
T PRK05122 355 GPLAGLVASWFGYPSIFLAAALAALLGLALTWLL-YRRAPR 394 (399)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh-cccccc
Confidence 999998888 677788888877777776655444 444443
No 37
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.60 E-value=1.1e-13 Score=128.30 Aligned_cols=215 Identities=16% Similarity=0.189 Sum_probs=121.7
Q ss_pred ccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhHHHHHH
Q 019756 15 VIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEARLLNL 94 (336)
Q Consensus 15 ~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (336)
.++||+.|++.++..++..+....+||+|++..+++ ++++.+.+.++.
T Consensus 166 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~ 213 (394)
T TIGR00883 166 EWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE--------------------------------KHKKKRGPIRET 213 (394)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh--------------------------------ccccccCCHHHH
Confidence 568999999988877777777777888875321100 000111233444
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeee
Q 019756 95 FQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVI 170 (336)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~ 170 (336)
++++.+ ........... ..........+.|.+. ++.|.+.. .......+...++.++.++++||+|||+.+..
T Consensus 214 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~- 290 (394)
T TIGR00883 214 LTKHRK-PFLLGLGLVIA-TTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLII- 290 (394)
T ss_pred HHhchH-HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH-
Confidence 444331 12222222222 2223445556667766 55676655 44556667788899999999999999987664
Q ss_pred cccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhh
Q 019756 171 TTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFV 250 (336)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (336)
+..+..+........ .... ...+....... ..+.......+...+
T Consensus 291 ---------------------------~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~-~~g~~~~~~~~~~~~ 335 (394)
T TIGR00883 291 ---------------------------FTVLAALLAVPLLMA-LLDS------GSFTLFFFLVL-GLALIGGMYTGPMGS 335 (394)
T ss_pred ---------------------------HHHHHHHHHHHHHHH-HhcC------CchHHHHHHHH-HHHHHHHHHhhhHHH
Confidence 333222222111111 1110 11122222222 222222233455678
Q ss_pred hhcccCCccchhhhhHHHHHH-HHHHHHHHHHHHHHHHH-hh-cchhhhHHH
Q 019756 251 IMSEIFPINVKASAGSLVILI-CWSCSWIVTYTFNFMMQ-WS-SAGTFFIFS 299 (336)
Q Consensus 251 ~~~e~~p~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~-~~-~~~~~~~~~ 299 (336)
++.|.+|++.|+++.++.+.. ..+|..++|.+.+.+.+ .+ +...++...
T Consensus 336 ~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 336 FLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLA 387 (394)
T ss_pred HHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHH
Confidence 999999999999999986544 56788899999999988 44 434333333
No 38
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.59 E-value=1.1e-13 Score=129.35 Aligned_cols=163 Identities=9% Similarity=0.004 Sum_probs=110.5
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
+.....+.|.++++.|.+.. ......+++.++|.+..+++.||+|||+....
T Consensus 221 ~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~------------------------- 275 (393)
T PRK09705 221 YASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLML------------------------- 275 (393)
T ss_pred HHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHH-------------------------
Confidence 44566677777777887765 56667778899999999999999999988776
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccC-CccchhhhhHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIF-PINVKASAGSLVILICW 273 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~ 273 (336)
+..+..++...+... +. .. .... ....+.+ ..+..+.......+.+ |++.|++..|+.+..+.
T Consensus 276 ---~~~l~~~~~~~~~~~---~~------~~-~~~~--~~l~g~g-~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 339 (393)
T PRK09705 276 ---ALVLQLVGFCGFIWL---PL------QL-PVLW--AMVCGLG-LGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGF 339 (393)
T ss_pred ---HHHHHHHHHHHHHHc---cc------hH-HHHH--HHHHHHh-ccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence 554444444333211 11 01 1111 1111112 2222344445556666 46789999999999999
Q ss_pred HHHHHHHHHHHHHHH-hh-cchhhhHHHHHHHHHHHHHHhhccCCCCCCH
Q 019756 274 SCSWIVTYTFNFMMQ-WS-SAGTFFIFSGIGFFTVLFVAKIVPETKGRTL 321 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~-~~~~~~~~~~~~~~~~i~~~~~~~et~~~~~ 321 (336)
+++.++|.+.+++.+ .+ +...+.+.++++++..+....+.|||+++..
T Consensus 340 ~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 340 IIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 999999999999999 43 5566667777777777767778899887753
No 39
>PRK12382 putative transporter; Provisional
Probab=99.57 E-value=6.4e-13 Score=123.96 Aligned_cols=152 Identities=13% Similarity=0.013 Sum_probs=105.0
Q ss_pred HHHhHHHHHHHhCCCch-hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhh
Q 019756 121 MAYYTSSIFEKAGASGS-IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISA 199 (336)
Q Consensus 121 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (336)
...+.+.++++.+.+.. ......+++.+++.+..+++.||+|||+.+.. +.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~----------------------------~~ 286 (392)
T PRK12382 235 IGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIV----------------------------SL 286 (392)
T ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHH----------------------------HH
Confidence 34455555666666543 44445566678889999999999999998877 66
Q ss_pred hhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHH
Q 019756 200 CGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIV 279 (336)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 279 (336)
...+++...+... ...+...+.....+.+.+ ...+...+...|.+|++.|+++.|+.+....+|..++
T Consensus 287 ~~~~~~~~~~~~~-----------~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig 354 (392)
T PRK12382 287 LVETVGLLLLWLA-----------PTAWVALAGAALTGAGCS-LIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVS 354 (392)
T ss_pred HHHHHHHHHHHHc-----------ccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666655544321 111222222222222222 2234455677889999999999999999999999999
Q ss_pred HHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhh
Q 019756 280 TYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 280 ~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
|.+.+.+.+ .++...+.+.+.+.+++.++.+..
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 355 GPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 999999988 788888888888777777665544
No 40
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.57 E-value=2.2e-13 Score=127.30 Aligned_cols=153 Identities=13% Similarity=0.116 Sum_probs=92.6
Q ss_pred HHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhh
Q 019756 121 MAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQ 196 (336)
Q Consensus 121 ~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (336)
...+.|.+. ++.+.+.. .......+..+++.++.|+++||+|||+.+..
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~--------------------------- 287 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRV--------------------------- 287 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH---------------------------
Confidence 344556554 45677654 33334445567788999999999999986655
Q ss_pred hhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHH
Q 019756 197 ISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCS 276 (336)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 276 (336)
+.....+.+.... . . ...+..++.........+. ..+....+..|.+|+ .|+++.++.+...++|.
T Consensus 288 -~~~~~~~~~~~~~---~-~-------~~~~~~l~~~~l~~~~~g~-~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~ 353 (393)
T PRK15011 288 -AAVAGVCFYAGML---M-A-------HSPAILLGLQLLNAIYIGI-LGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGW 353 (393)
T ss_pred -HHHHHHHHHHHHH---H-H-------hhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHH
Confidence 4333333222111 0 1 1111111111111111111 112335677899986 49999999999999999
Q ss_pred HHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccC
Q 019756 277 WIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPE 315 (336)
Q Consensus 277 ~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~e 315 (336)
.++|.+.+.+.+ .++...+.+.+++.+++.+. .++.||
T Consensus 354 ~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 392 (393)
T PRK15011 354 IIAGSLAGIVAEIWNYHAVFWFALVMIIATLFC-LLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHhhcC
Confidence 999999999988 67777777767666665554 344454
No 41
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.56 E-value=3.2e-13 Score=129.76 Aligned_cols=236 Identities=13% Similarity=0.106 Sum_probs=136.3
Q ss_pred HHHHHhhC-ccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhc
Q 019756 7 SLAYFFGN-VIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQK 85 (336)
Q Consensus 7 ~l~~~l~~-~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (336)
.++..+.+ .+|||..|++.++..++..+..+++||+|+. +.+ ++ +. ++
T Consensus 161 ~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~---~~~-~~-------------~~--------------~~ 209 (491)
T PRK11010 161 GLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDT---IPV-PK-------------TL--------------EQ 209 (491)
T ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCccc---ccc-cc-------------ch--------------hh
Confidence 33334555 5699999999887777776666678887631 000 00 00 00
Q ss_pred hhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHH-HHHHHHHHHHHHHHHHhhhhc
Q 019756 86 HSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGS-RGIAIIQIPAVITSVLLMDKA 161 (336)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~-~~~~~~~~~g~~~~~~l~dr~ 161 (336)
....++++.++++..+...+...+... ..........|++.++.|.+.. ... ....++.++|.+++|+++||+
T Consensus 210 ~~~~~l~~~~~~~~~~~~ll~~~l~~~---~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~ 286 (491)
T PRK11010 210 AVVAPLRDFFGRNNAWLILLLIVLYKL---GDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL 286 (491)
T ss_pred hHHHHHHHHHcCcCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011235566655544443333222221 1122223334444556788776 222 233467889999999999999
Q ss_pred CCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhh
Q 019756 162 GRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNS 241 (336)
Q Consensus 162 grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (336)
|||+.+.+ +....++......... ... ...+.......+.....+
T Consensus 287 g~~~~l~i----------------------------~~~l~~l~~l~~~~l~-~~~------~~~~~l~~~~~l~~~~~g 331 (491)
T PRK11010 287 SLFRALMI----------------------------FGILQGVSNAGYWLLS-ITD------KNLYSMGAAVFFENLCGG 331 (491)
T ss_pred hHHHHHHH----------------------------HHHHHHHHHHHHHHHH-hcc------ccHHHHHHHHHHHHHHHH
Confidence 99887665 4443333332222111 110 011111111222111112
Q ss_pred cCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhh
Q 019756 242 IGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 242 ~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
.+. +..+++..++.|++.+++..++.+....+|..+++.+.+.+.+ .++...|.+.+++++.+.+.....
T Consensus 332 ~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 332 MGT-AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 111 3346888899999999999999999999999988889999988 777777877777777776655444
No 42
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.54 E-value=6.8e-13 Score=124.19 Aligned_cols=134 Identities=7% Similarity=-0.058 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhcccc
Q 019756 141 RGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKN 220 (336)
Q Consensus 141 ~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (336)
...+++.+++.+..++++||+|||+.+.. +.....++.+.....
T Consensus 265 ~~~~l~~~~~~~~~g~l~dr~g~~~~~~~----------------------------~~~~~~~~~~~~~~~-------- 308 (408)
T PRK09874 265 SVPGVAALLSAPRLGKLGDRIGPEKILIT----------------------------ALIFSVLLLIPMSFV-------- 308 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhHHH----------------------------HHHHHHHHHHHHHHh--------
Confidence 34456677788889999999999998777 555444444332211
Q ss_pred ccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHH
Q 019756 221 MNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFS 299 (336)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~ 299 (336)
...+...+.... .+.......+...+.+.|..|++.|++..++.+....+|..++|.+.+.+.+ .++...|.+.+
T Consensus 309 ---~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~ 384 (408)
T PRK09874 309 ---QTPLQLGILRFL-LGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTA 384 (408)
T ss_pred ---ccHHHHHHHHHH-HHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHH
Confidence 111222222222 2222223344555677788899999999999999999999999999999888 78888899888
Q ss_pred HHHHHHHHHHHhhcc
Q 019756 300 GIGFFTVLFVAKIVP 314 (336)
Q Consensus 300 ~~~~~~~i~~~~~~~ 314 (336)
++.+++.+..+...+
T Consensus 385 ~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 385 GVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888887776655443
No 43
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.54 E-value=5.8e-13 Score=123.97 Aligned_cols=228 Identities=15% Similarity=0.067 Sum_probs=139.5
Q ss_pred chhhHHHHHhhCccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 3 TFGCSLAYFFGNVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 3 ~~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
.+|++++..+.+.+|||..|++......+..+.. .++|+++ +++.++ +
T Consensus 142 ~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~~~----~~~~~~---------------------------~ 189 (382)
T TIGR00902 142 IIGSALFGGLIGMFDEQNILAILTAGLAFMLIGF-LIKPTIP----PKDAIP---------------------------E 189 (382)
T ss_pred HHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HcCCCCC----CCcccc---------------------------c
Confidence 3566666666777899999988655433333333 3344321 000000 0
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMD 159 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~d 159 (336)
+++.+....++.+|++..+...+..++... .......+.|.+.++.|.+.. .......+..+++....+++.|
T Consensus 190 ~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~ 265 (382)
T TIGR00902 190 DESQGDSAFIALLKNPMNLRFLAAVCLIQG----AHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQ 265 (382)
T ss_pred cccccchhHHHHHcChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence 000112235667777666555544333322 233344455666677888876 3444566677888889999999
Q ss_pred hcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHH
Q 019756 160 KAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAF 239 (336)
Q Consensus 160 r~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
|+|+|+.+.+ +.+...+....++.. . +...++....+.+.
T Consensus 266 r~g~~~~l~~----------------------------~~~~~~~~~~~~~~~-----------~-~~~~~~~~q~l~g~ 305 (382)
T TIGR00902 266 NCSARDLLLI----------------------------SAIACVGRWAIIGAI-----------E-AFPLIFLLQILHCG 305 (382)
T ss_pred hCCHHHHHHH----------------------------HHHHHHHHHHHHHhH-----------h-hHHHHHHHHHHHHH
Confidence 9999998887 777777776665432 1 22222323333333
Q ss_pred hhcCccchhhhhhcccCCccchhhhhHHHHH-HHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHH
Q 019756 240 NSIGLAGIPFVIMSEIFPINVKASAGSLVIL-ICWSCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVL 307 (336)
Q Consensus 240 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 307 (336)
......+....++++. |++.|+++.++.+. ...+|..++|.+.|.+.|......|...+++.+++.+
T Consensus 306 ~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 306 TFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 3333344556788888 99999999999875 4678999999999999994334667777777665543
No 44
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.52 E-value=1.7e-12 Score=120.85 Aligned_cols=149 Identities=10% Similarity=-0.056 Sum_probs=88.5
Q ss_pred HHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhh
Q 019756 125 TSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACG 201 (336)
Q Consensus 125 ~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (336)
.|.+.+..|.+.. .......++.+++.++.+++.||+|+|+.+.. +...
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~----------------------------~~~~ 274 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAV----------------------------TDFI 274 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHH----------------------------HHHH
Confidence 3444445677765 55667778889999999999999999998877 6655
Q ss_pred hHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHH
Q 019756 202 MAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTY 281 (336)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 281 (336)
.+++...+... . ...+...+.......+......+.......+..|.+.++.+ ..+....+|+.++|.
T Consensus 275 ~~i~~~~~~~~---~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~ 342 (382)
T PRK10091 275 IVLALLMLFFF---G-------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAY 342 (382)
T ss_pred HHHHHHHHHHH---H-------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHH
Confidence 55555443311 0 11122222222222221111122222344455555555544 346678899999999
Q ss_pred HHHHHHH--hhcchhhhHHHHHHHHHHHHHHhhc
Q 019756 282 TFNFMMQ--WSSAGTFFIFSGIGFFTVLFVAKIV 313 (336)
Q Consensus 282 ~~~~l~~--~~~~~~~~~~~~~~~~~~i~~~~~~ 313 (336)
+.+.+.+ .++...+.+.++++.+.......+.
T Consensus 343 ~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 343 CGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 9999988 4566777776666555554444443
No 45
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.52 E-value=3.7e-13 Score=126.56 Aligned_cols=178 Identities=10% Similarity=0.031 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccccc
Q 019756 101 NSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLF 177 (336)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~ 177 (336)
++..+..++.++..+.......+..|.+.+++|.+.. +......++..++.+..|++.||+|||+++..
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~-------- 78 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG-------- 78 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH--------
Confidence 3444444555555555566777778888899988876 55666777788899999999999999999887
Q ss_pred ccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCC
Q 019756 178 KMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFP 257 (336)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 257 (336)
+.++..++....+.. .+ +..+.....+.+....+..+....+++|.+|
T Consensus 79 --------------------~~~~~~~~~~~~~~~-----------~~-~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~ 126 (412)
T TIGR02332 79 --------------------IMVLWGIASTATMFA-----------TG-PESLYLLRILVGIAEAGFLPGILLYLTFWFP 126 (412)
T ss_pred --------------------HHHHHHHHHHHHHHh-----------cC-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcC
Confidence 777777777766542 11 2222333344444444445666688999999
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-------hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 258 INVKASAGSLVILICWSCSWIVTYTFNFMMQ-------WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 258 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
+++|++++++.+....+|..+++.+.+.+.+ .+|++.|.+.++..++..++.++++||+++
T Consensus 127 ~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 127 AYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 9999999999999999999999999888763 489999999888887777767777888764
No 46
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.52 E-value=7.7e-13 Score=131.43 Aligned_cols=158 Identities=13% Similarity=0.033 Sum_probs=112.9
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
...+....|.+.++.+.+.. +......++.++|.+++|+++||+|||+.+++
T Consensus 183 ~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii------------------------- 237 (742)
T TIGR01299 183 VFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLI------------------------- 237 (742)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH-------------------------
Confidence 34566678888888888765 56677788899999999999999999999888
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
++++.+++.++.++. . +...++...++.+++..+..+...++++|.+|++.|+..+++...+..+
T Consensus 238 ---~lil~~i~~ll~afa-----------~-s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~i 302 (742)
T TIGR01299 238 ---CLSVNGFFAFFSSFV-----------Q-GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMI 302 (742)
T ss_pred ---HHHHHHHHHHHHHHH-----------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 776666666655532 1 1222233333444444445578889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-h-------------hcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 275 CSWIVTYTFNFMMQ-W-------------SSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 275 g~~~~~~~~~~l~~-~-------------~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
|.++++.+...+.. . +|+..+++.++.++ ..++..+++||+
T Consensus 303 G~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~l-l~ll~~~~lPES 357 (742)
T TIGR01299 303 GGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCV-FAIGALTFMPES 357 (742)
T ss_pred HHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHH-HHHHHHHHcCCC
Confidence 99999887765543 2 34555555444443 344456678987
No 47
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.51 E-value=6e-13 Score=127.09 Aligned_cols=253 Identities=13% Similarity=0.069 Sum_probs=136.8
Q ss_pred hhhHHHHHhhCc-cchHHHHHHhHHHHHHHHHHHh-cCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNV-IPWRILALIGVIPCVLQLIGLF-FIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIE 81 (336)
Q Consensus 4 ~G~~l~~~l~~~-~gWr~~f~i~~i~~~i~~~~~~-~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
+|++++..+... .|||+.|++.++++++..+.++ +.||+|+.. .+.++.+ .+..++..+
T Consensus 182 i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~----------------~~~i~~~~~ 242 (465)
T TIGR00894 182 IFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH---PCISKFE----------------KKYINSSLQ 242 (465)
T ss_pred HHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC---CCCCHHH----------------HHHHHhhcc
Confidence 345555555566 4999999998887777665554 467777521 1111100 000100000
Q ss_pred H--hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHH
Q 019756 82 I--SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSV 155 (336)
Q Consensus 82 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~ 155 (336)
+ ++++.+.++++.++++..+...+.. +....+.+.+..|+|.++++ .|.+.. .......++..++.+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g 318 (465)
T TIGR00894 243 GQKGSTRQSLPIKAIPKSLPVWAIWFAI----FGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAG 318 (465)
T ss_pred cccCCCCCCCCHHHHhcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHH
Confidence 0 0111223467777766555444332 33333456667788877655 577654 555667788899999999
Q ss_pred HhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHh-hhccccccchhHHHHHHHHH
Q 019756 156 LLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFY-LKEVKNMNDAAHILVLVGFM 234 (336)
Q Consensus 156 ~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (336)
+++||.++|+...... . ......++......... ..... ...+..++.+
T Consensus 319 ~l~d~~~~~~~~~~~~----~---------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~- 368 (465)
T TIGR00894 319 YLADFLKSSKTLSLTA----A---------------------RKIFNGIGGLGPGIFAYALPYLS----AAFYLTIIIL- 368 (465)
T ss_pred HHHHHHHHcCCCcHHH----H---------------------HHHHHHHHHHHHHHHHHHHHHcC----CchHHHHHHH-
Confidence 9999987665432100 0 00111111111111110 01000 1111222222
Q ss_pred HHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh----hcchhhhHHHHHHHHHHHHHH
Q 019756 235 GCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQW----SSAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~i~~~ 310 (336)
.+.+....+..+.......|..|. .+|.+.++.+..+.+|+.++|.+.+.+.+. .+...|.+.++..+++.++..
T Consensus 369 ~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 369 TLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 222222222233334555677765 899999999999999999999999987762 255677777777776665443
No 48
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.51 E-value=3e-13 Score=124.65 Aligned_cols=233 Identities=13% Similarity=0.123 Sum_probs=122.3
Q ss_pred HHHHhhCccchHHHHHHhHHHHHH-HHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhch
Q 019756 8 LAYFFGNVIPWRILALIGVIPCVL-QLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKH 86 (336)
Q Consensus 8 l~~~l~~~~gWr~~f~i~~i~~~i-~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (336)
++..+....+||+.|++.++..++ .++..++.||+|+....+. .++. ..++.+ +.+++.+++.+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~------~~~~~~~~~~~~ 204 (379)
T TIGR00881 139 VLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPP-AEEM-------PNEEPD------GDAEKKEEELTK 204 (379)
T ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCc-cccC-------cccccc------cccccccccccc
Confidence 334445667999999987765554 4455667788764211000 0000 000000 000000011111
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHH-HhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcC
Q 019756 87 SEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFE-KAGASGS---IGSRGIAIIQIPAVITSVLLMDKAG 162 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~g 162 (336)
.+...++.++++..+...+....... .......+.|.+.+ ..|.+.. .......++.+++.++.+++.||.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~ 280 (379)
T TIGR00881 205 KQIFLQYVLLNKVLWYISLGYVFVYV----VRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLF 280 (379)
T ss_pred hHHHHHHHHhcchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHc
Confidence 22234455555554444333222222 23445555666554 4577654 5566677788999999999999864
Q ss_pred CceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhc
Q 019756 163 RKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSI 242 (336)
Q Consensus 163 rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (336)
+|+.... ..................+. ...+.. .......+....
T Consensus 281 ~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~g~~~~ 325 (379)
T TIGR00881 281 NGRRGPL----------------------------AVFFMALIIVSLLVYWLNPA------ANPLMD-LICLFALGFLVY 325 (379)
T ss_pred CCcchHH----------------------------HHHHHHHHHHHHHHHhcCcc------hhHHHH-HHHHHHHHHHHh
Confidence 4333222 11111111111111111000 111111 222222222333
Q ss_pred CccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcch
Q 019756 243 GLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAG 293 (336)
Q Consensus 243 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~ 293 (336)
+..+....+.+|.+|++.|+++.|+.+....+|+.++|.+.+.+.+ .++..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 377 (379)
T TIGR00881 326 GPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAG 377 (379)
T ss_pred hhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccc
Confidence 4444556788999999999999999999999999999999999988 55544
No 49
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.49 E-value=1.2e-13 Score=130.86 Aligned_cols=148 Identities=20% Similarity=0.329 Sum_probs=90.6
Q ss_pred chhhHHHHHh------hCccchHHHHHHhHHHHHH-HHHHHhcCCCChH--HHHhcCCHHHHHHHHHHHhCCCcchHHHH
Q 019756 3 TFGCSLAYFF------GNVIPWRILALIGVIPCVL-QLIGLFFIPESPR--WLVKIGKEKEFETTLQNLRGKGADISQEA 73 (336)
Q Consensus 3 ~~G~~l~~~l------~~~~gWr~~f~i~~i~~~i-~~~~~~~lpEsp~--~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 73 (336)
.+|.++++.+ ....||||+|++.++..++ .+++.+++|+.|. |+.++++.+-+ .++.++++.
T Consensus 184 i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~---~~~~~~~~~------ 254 (495)
T KOG2533|consen 184 IFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELV---VERLRESPS------ 254 (495)
T ss_pred HHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHH---HHHHHhccC------
Confidence 3455555554 2345999999996665554 5567788999996 22211111111 111111110
Q ss_pred HHHHHHHHHhhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHH
Q 019756 74 AEIRDHIEISQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIP 149 (336)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~ 149 (336)
...+++.++..+++.++.+..+...+..++... ..+.+.+|+|.++++ .|.+.. .......+++++
T Consensus 255 ------~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~l----v~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v 324 (495)
T KOG2533|consen 255 ------GGIENKFKWKGFKEALKDPGVWPFSLCYFFLKL----VNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIV 324 (495)
T ss_pred ------CCcccccCHHHHHHHHhchhHHHHHHHHHHHhh----ccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHH
Confidence 000111345667788888777776655444333 366788889988888 335433 788889999999
Q ss_pred HHHHHHHhhhh----cCCceeeee
Q 019756 150 AVITSVLLMDK----AGRKPLLMV 169 (336)
Q Consensus 150 g~~~~~~l~dr----~grr~~l~~ 169 (336)
+.+++|+++|| ..+|.....
T Consensus 325 ~~i~ag~lsdr~~~~~~~~~~~~~ 348 (495)
T KOG2533|consen 325 GLILAGYLSDRLKTIFARRLLFIV 348 (495)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHH
Confidence 99999999999 555554443
No 50
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.49 E-value=2.1e-12 Score=120.76 Aligned_cols=235 Identities=14% Similarity=0.116 Sum_probs=131.2
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHHHHHhc-CCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQLIGLFF-IPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~-lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+. .++||.+|++.++.+++..+..+. .||+|+. ++.++ ..+ .+
T Consensus 148 ~g~~~~g~l~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~~----------------~~ 199 (396)
T TIGR00882 148 LCASIAGILF-SIDPQIVFWLGSGFALILMLLLMFAKPKAPSS-------ATVAN----ALG----------------AN 199 (396)
T ss_pred HHHHHHhhhh-ccCchHHHHHHHHHHHHHHHHHHHhCCCCchh-------hhhhc----ccc----------------cc
Confidence 4555555443 359999999987776665544443 4554421 00000 000 00
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHh----CCCch---hHHHHHHHHHHHHHHHHH
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKA----GASGS---IGSRGIAIIQIPAVITSV 155 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~---~~~~~~~~~~~~g~~~~~ 155 (336)
+++.+.++.++.++++..+...+..+.... .......+.+.+.++. +.+.. .......+...++.+..+
T Consensus 200 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~----~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g 275 (396)
T TIGR00882 200 ASAFSLKLALELFRQRKFWMFVLYVVGVAC----VYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAP 275 (396)
T ss_pred cCCCCHHHHHHHHcCCcHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122345667777655443332222111 1222222233333332 33322 344555667788889999
Q ss_pred HhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHH
Q 019756 156 LLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMG 235 (336)
Q Consensus 156 ~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (336)
++.||+|||+.+.+ +..+.++........ ...+...+. ..
T Consensus 276 ~l~~r~g~~~~l~~----------------------------~~~l~~l~~~~~~~~-----------~~~~~~~~~-~~ 315 (396)
T TIGR00882 276 LIINRIGAKNALLI----------------------------AGTIMSVRIIGSSFA-----------TTALEVVIL-KM 315 (396)
T ss_pred HHHHHhccchhHHH----------------------------HHHHHHHHHHHHHhc-----------CChHHHHHH-HH
Confidence 99999999998877 665555544433311 112222222 22
Q ss_pred HHHHhhcCccchhhhhhcccCCccchhhhhHH-HHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHH
Q 019756 236 CSAFNSIGLAGIPFVIMSEIFPINVKASAGSL-VILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~ 310 (336)
..+............+..|..|++.++++.+. .+....+|+.+++.+.+.+.+ .++...|.+.+++.++..++..
T Consensus 316 l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 316 LHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 22222111122334566777888888888776 577899999999999999999 6888888888887776665543
No 51
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.48 E-value=3e-12 Score=119.45 Aligned_cols=232 Identities=11% Similarity=-0.008 Sum_probs=128.6
Q ss_pred hhhHHHH----HhhCccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHH
Q 019756 4 FGCSLAY----FFGNVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDH 79 (336)
Q Consensus 4 ~G~~l~~----~l~~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 79 (336)
+|.+++. .+.+.+|||..|++.++..++..+..++++|+++ ++.++
T Consensus 144 lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~-----~~~~~------------------------- 193 (390)
T TIGR02718 144 IGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAV-----ASPEA------------------------- 193 (390)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCc-----Ccccc-------------------------
Confidence 3444544 3456779999999988776665555555544321 00000
Q ss_pred HHHhhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchhHHHH---HH-HHHHHHHHHHH
Q 019756 80 IEISQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSIGSRG---IA-IIQIPAVITSV 155 (336)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~-~~~~~g~~~~~ 155 (336)
++++..++++.+|++..+......++.... ......+.+.+.++.|.+.+..... .+ ...+++.+..+
T Consensus 194 ----~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g 265 (390)
T TIGR02718 194 ----PLARRASLFRFFRRPLAWSLLALALLSAMT----AVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGA 265 (390)
T ss_pred ----chhhHHHHHHHHcCcCHHHHHHHHHHHHHH----HHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 000112356677766655544433333221 2222234455566788887733332 22 35567788999
Q ss_pred HhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHH
Q 019756 156 LLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMG 235 (336)
Q Consensus 156 ~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (336)
++.||+|+|+.+.. +....++........ ...... ..... ......
T Consensus 266 ~l~~r~g~~~~l~~----------------------------~~~~~~~~~~~~~~~-~~~~~~----~~~~~-~~~~~~ 311 (390)
T TIGR02718 266 WLVRRAGLWRTFIL----------------------------GVGLAGSLALLWFAQ-AAFWLA----PGIAV-AWSCSA 311 (390)
T ss_pred HHHHHhhHHHHHHH----------------------------HHHHHHHHHHHHHHH-HHcccC----CcHHH-HHHHHH
Confidence 99999999998776 444432222211111 000000 01111 111111
Q ss_pred HHHHhhcCccchhhhhhcccCCc-cchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHH
Q 019756 236 CSAFNSIGLAGIPFVIMSEIFPI-NVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVL 307 (336)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i 307 (336)
+.........+...+.+.+..++ +.+++.+++.+....+|..++|.+.+.+.+ .++...|...+++.+++.+
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 312 FGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 11111111123334555566655 889999999999999999999999999998 6666777777666665544
No 52
>TIGR00895 2A0115 benzoate transport.
Probab=99.47 E-value=7.3e-13 Score=122.99 Aligned_cols=161 Identities=16% Similarity=0.131 Sum_probs=120.0
Q ss_pred hhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 117 GASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
......++.|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~------------------------ 87 (398)
T TIGR00895 32 DLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLW------------------------ 87 (398)
T ss_pred HHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHH------------------------
Confidence 345667778888888888765 45566667788999999999999999998887
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+..+..++..+.... . +...++....+.+.......+...+++.|.+|++.|+++.++......
T Consensus 88 ----~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 151 (398)
T TIGR00895 88 ----SILLFSVFTLLCALA-----------T-NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYP 151 (398)
T ss_pred ----HHHHHHHHHHHHHHc-----------c-chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHH
Confidence 666666665555432 1 122223333334444444566778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
+|..+++.+.+.+.+ .+|...+.+.+++..+..++...+.||+.
T Consensus 152 ~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 152 IGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred HHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 999999999998887 78888888877666666666666777764
No 53
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.47 E-value=9e-13 Score=122.21 Aligned_cols=163 Identities=17% Similarity=0.153 Sum_probs=121.3
Q ss_pred hhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 117 GASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
+........|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~------------------------ 75 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLL------------------------ 75 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHH------------------------
Confidence 344555567888888998776 56666777888999999999999999999888
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+.....++.+..... .+...+.....+.+.......+...+++.|.+|+++|+++.++.+....
T Consensus 76 ----~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (385)
T TIGR00710 76 ----GLFIFALSSLGLALS------------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLA 139 (385)
T ss_pred ----HHHHHHHHHHHHHHH------------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 776666666665432 1122222233333333333445667899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCCC
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKGR 319 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~ 319 (336)
+|..++|.+.+.+.+ .+|+..+++.+++.++..+...+..||++++
T Consensus 140 ~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 140 LAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999998887 7888888888887777777666667776543
No 54
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.47 E-value=3.6e-12 Score=120.73 Aligned_cols=168 Identities=10% Similarity=0.002 Sum_probs=121.0
Q ss_pred HHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccccccccccccc
Q 019756 109 LMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQ 185 (336)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~ 185 (336)
+..+..+........+.|.+.++.|.+.. +......++..++.++.|++.||+|||+.+.+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~---------------- 93 (434)
T PRK11663 30 LGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGI---------------- 93 (434)
T ss_pred HHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHH----------------
Confidence 33333333344567788889999998865 55666777888999999999999999999888
Q ss_pred ccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhh
Q 019756 186 RGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAG 265 (336)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 265 (336)
+.+..++++++.+.. .+.+...+ ...+.+.......+....+++|.+|+++|++++
T Consensus 94 ------------~~~~~~~~~~~~~~~-----------~~~~~l~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~ 149 (434)
T PRK11663 94 ------------GLIATGIINILFGFS-----------SSLWAFAL-LWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWW 149 (434)
T ss_pred ------------HHHHHHHHHHHHHHH-----------hHHHHHHH-HHHHHHHHHHccchHHHHHHHHhCCHHHHHHHH
Confidence 777777776665532 11122222 222222222223455678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 266 SLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 266 ~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
++.+....+|+.++|.+.+.+.+ .+|++.|.+.+++.++..+...+.+||+
T Consensus 150 ~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 150 AIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999998887 7888899888877666555555555654
No 55
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.47 E-value=1.6e-12 Score=119.26 Aligned_cols=214 Identities=11% Similarity=0.067 Sum_probs=127.7
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHHHHHhc--CCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQLIGLFF--IPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIE 81 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~--lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
+|+.++..+.+..|||+.|++.++..++..+..+. .||+++. +++ +.+++
T Consensus 143 ~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-------------~~~~~--------- 194 (365)
T TIGR00900 143 VGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS------EIQ-------------ALSNA--------- 194 (365)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc------ccc-------------ccchh---------
Confidence 45566666667789999999977766655544333 3443210 000 00000
Q ss_pred HhhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHh
Q 019756 82 ISQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLL 157 (336)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l 157 (336)
..++..+.+++.++++..+...+...+..... ......+.|.+.++ .+.+.. .......++.+++.+..+++
T Consensus 195 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (365)
T TIGR00900 195 -VLRDTREGIKFVLKNPLLRTLLLLALLFNLVF---APAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLL 270 (365)
T ss_pred -HHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHH---HHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011223455666665554444333222211 11222556666654 566654 45566677888999999999
Q ss_pred hhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHH
Q 019756 158 MDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCS 237 (336)
Q Consensus 158 ~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
.||.+||+.+.. +....++++...... + ...+...+.... .
T Consensus 271 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~-~ 311 (365)
T TIGR00900 271 GRYFKRMALMTG----------------------------AIFVIGLAILVVGLT---P-------PNFPLFLVLWFA-I 311 (365)
T ss_pred HHHhchhHHHHH----------------------------HHHHHHHHHHHHHhh---c-------hhHHHHHHHHHH-H
Confidence 999999988776 555555554444321 0 011222222222 2
Q ss_pred HHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 238 AFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 238 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
+.......+...+++.|..|++.|+++.|+.+...+++..++|.+.+.+.+
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333445667889999999999999999999999999999999998876
No 56
>PRK11043 putative transporter; Provisional
Probab=99.46 E-value=8.1e-12 Score=116.89 Aligned_cols=209 Identities=13% Similarity=0.103 Sum_probs=119.5
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHh
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEIS 83 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (336)
+|+.++..+.+.+|||+.|++.++..++..+..++++|+++. +++
T Consensus 145 ~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~------------------------------ 189 (401)
T PRK11043 145 LAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKA-----RKQ------------------------------ 189 (401)
T ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCc-----ccc------------------------------
Confidence 556666666677899999999877777666666666665420 000
Q ss_pred hchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhh
Q 019756 84 QKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDK 160 (336)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr 160 (336)
++++.++++.++++..+...+...... ........+.|.+.++.|.+.. .......++.++|.+..+++.||
T Consensus 190 -~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r 264 (401)
T PRK11043 190 -SQDALTFKQLLKSKTYLGNVLIFAACS----AAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK 264 (401)
T ss_pred -chHHHHHHHHHcChhHHHHHHHHHHHH----HHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001123445555554433322221111 1223344566777777787765 33344456778888899999999
Q ss_pred cCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHh
Q 019756 161 AGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFN 240 (336)
Q Consensus 161 ~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
+|+|+.... .....+++............ ...+...+....... .
T Consensus 265 ~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~ 309 (401)
T PRK11043 265 WGGEQLLPW----------------------------LLVLFAVSVIAIWLASLLSH------PSLVPLLIPFCVMAA-A 309 (401)
T ss_pred cCHHHHHHH----------------------------HHHHHHHHHHHHHHHHHhcc------CcHHHHHHHHHHHHH-H
Confidence 999886654 43444333332221111111 111222222222222 2
Q ss_pred hcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 241 SIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 241 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
.....+.......|..| +.|+++.|+.+.....++..++.+.+.+.+
T Consensus 310 ~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 310 NGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 22334445556667776 479999999999988888888888888766
No 57
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.46 E-value=5.2e-12 Score=117.53 Aligned_cols=228 Identities=15% Similarity=0.101 Sum_probs=131.3
Q ss_pred chhhHHHHHhhCccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 3 TFGCSLAYFFGNVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 3 ~~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
.+|++++..+.+.+|||.+|++.++..++..+...+.||.++ +++.++
T Consensus 142 ~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------------------- 189 (382)
T PRK11128 142 VIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLRPTIMP----QGESRQ---------------------------- 189 (382)
T ss_pred HHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCCCC----cccccc----------------------------
Confidence 467777777778889999999876654444444445565321 000000
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMD 159 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~d 159 (336)
+.++...++++.++++..+...+..++.... ......+.|.+.++.|.+.. .......+..+++....+++.|
T Consensus 190 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~ 265 (382)
T PRK11128 190 QESAGWPAWKALLKEPTVWRFLLCVSLLQGS----HAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFR 265 (382)
T ss_pred ccccccchHHHHHcChhHHHHHHHHHHHHHH----hHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001123466777777666554433333222 22233344555567777765 3334455667777888999999
Q ss_pred hcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHH
Q 019756 160 KAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAF 239 (336)
Q Consensus 160 r~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
|+|+|+.+.. +.+..+++...+... ...+..++...+.+..
T Consensus 266 r~~~~~~l~~----------------------------~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~g~~ 306 (382)
T PRK11128 266 RWSARDLLLL----------------------------SAICGVVRWGLMGST-----------TALPWLIVIQILHCGT 306 (382)
T ss_pred HCCHHHHHHH----------------------------HHHHHHHHHHHHHhh-----------hhHHHHHHHHHHHHHH
Confidence 9999998777 666555554444321 1223333333333332
Q ss_pred hhcCccchhhhhhcccCCccchhhhhHHHHHH-HHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHH
Q 019756 240 NSIGLAGIPFVIMSEIFPINVKASAGSLVILI-CWSCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVL 307 (336)
Q Consensus 240 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 307 (336)
... ..+....+..+. |++++++..++.+.. ...|..++|.+.|.+.+......++..+++.+++.+
T Consensus 307 ~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 307 FTV-CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAGVFWVMALVALPALF 373 (382)
T ss_pred HHH-HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 332 233445666676 555678888887644 456778999999999983223556666655554433
No 58
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.46 E-value=6.2e-12 Score=116.55 Aligned_cols=228 Identities=16% Similarity=0.125 Sum_probs=124.9
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHH-HHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQL-IGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~-~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+.+..+||+.|++.++..++.. ...+..||+++. ++. + +
T Consensus 144 ~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~------------~--~-------------- 191 (385)
T TIGR00710 144 VAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPY----EAR------------I--Q-------------- 191 (385)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC----ccc------------C--C--------------
Confidence 455666666667799999999776655544 445567776521 000 0 0
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHH-HhCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFE-KAGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
.++..+.+++.++++..+...+....... .......+.|.+.+ +.|.++. .......++.+++.++.+++.
T Consensus 192 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 266 (385)
T TIGR00710 192 -ISTYFETFLLLLKSKMFWGYALIYGASFG----GFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFI 266 (385)
T ss_pred -HHHHHHHHHHHHcCchhHHHHHHHHHHHH----HHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111234455555554443332222211 23344455565544 5677665 455566778899999999999
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
||+|||+.+.. +.....++..++....... ...+...+....+.+
T Consensus 267 ~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g 311 (385)
T TIGR00710 267 KKWGAKSLLRM----------------------------GLILFAVSAVLLEITAILG-------LGSWAMIIGPMMFVG 311 (385)
T ss_pred HhcCHHHHHHH----------------------------HHHHHHHHHHHHHHHHHhc-------cchHHHHHHHHHHHH
Confidence 99999988776 6555555554444321110 011222222222222
Q ss_pred HhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHH
Q 019756 239 FNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFT 305 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 305 (336)
.......+.......|..| +.|+++.++.+...+.++.+.+.+.+...+ .....+........+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~-~~~~~~~~~~~~~~~~ 376 (385)
T TIGR00710 312 IGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHG-NTAWPMSLSCLVLAVV 376 (385)
T ss_pred HHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccc-cChHHHHHHHHHHHHH
Confidence 2222234455677788887 578999999999887765555555553333 2333344433333333
No 59
>PRK10054 putative transporter; Provisional
Probab=99.46 E-value=2.4e-12 Score=120.39 Aligned_cols=160 Identities=14% Similarity=0.061 Sum_probs=112.2
Q ss_pred hHHHHHhHHH-HHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 118 ASAMAYYTSS-IFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 118 ~~~~~~~~~~-~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
......+.|. +.++.|.+.. +......+...++.+..|+++||+|||+.+..
T Consensus 23 ~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~------------------------ 78 (395)
T PRK10054 23 RGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLL------------------------ 78 (395)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHH------------------------
Confidence 4444444444 4466788876 45555567788889999999999999998877
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+.+...+++..+.+. .+.+..++.......... ...+....+..|.+|++.|+++.|+.+...+
T Consensus 79 ----~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 142 (395)
T PRK10054 79 ----AITAFASGFIAIPLV-----------NNVTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLN 142 (395)
T ss_pred ----HHHHHHHHHHHHHHH-----------hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHH
Confidence 666666655554432 112222222222222222 3345567888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 274 SCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
+|..++|.+.+.+.+.++...|.+.+++.++..+...+++||++
T Consensus 143 lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 143 IGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999888778888888888777776665555556553
No 60
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.46 E-value=1.1e-11 Score=116.08 Aligned_cols=181 Identities=13% Similarity=0.091 Sum_probs=110.0
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceee
Q 019756 91 LLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLL 167 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l 167 (336)
+++.++++..+...+..++ ..........+.|.+.++.|.+.. .......++..++.+..|+++||+|||+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 290 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRII----NTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTV 290 (402)
T ss_pred HHHHHcChhHHHHHHHHHH----HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 4456666655443333222 222345566788888888888765 334456678899999999999999998865
Q ss_pred eeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccch
Q 019756 168 MVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGI 247 (336)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (336)
... +.....+++..+... +.... ...+...+.....+.+.. +..+.
T Consensus 291 ~~~---------------------------~~l~~~~~~~~l~~~---~~~~~---~~~~~~~~~~~~~G~~~~-~~~~~ 336 (402)
T TIGR00897 291 RWF---------------------------GGVGCGIFTLALYYI---PQHFG---HSFAVALIIAIALGIFLA-GYVPL 336 (402)
T ss_pred HHH---------------------------HHHHHHHHHHHHHHH---HHccC---CcHHHHHHHHHHHHHHHH-HHHHH
Confidence 320 222222322222211 10000 111222222222222222 22232
Q ss_pred hhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHh
Q 019756 248 PFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAK 311 (336)
Q Consensus 248 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~ 311 (336)
...+.|..| ++|+++.|+.+....+|+.++|.+.+.+.+ .++...+++.+++.+++.++..+
T Consensus 337 -~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 337 -AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred -HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 355677655 589999999999999999999999999998 78888888888877776665443
No 61
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.46 E-value=4.4e-13 Score=127.70 Aligned_cols=148 Identities=12% Similarity=0.033 Sum_probs=92.2
Q ss_pred HHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhc--CCceeeeeecccccccccccccccccccccchh
Q 019756 120 AMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKA--GRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~--grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
....+.+.+.++.|.+.. ......+++.+++.+..+++.||. ++|+...+
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~------------------------- 313 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLF------------------------- 313 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHH-------------------------
Confidence 344556666677777655 455566777788888899999974 33332222
Q ss_pred hhhhh--hhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHH
Q 019756 195 LQISA--CGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILIC 272 (336)
Q Consensus 195 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 272 (336)
+. ...+++.++.... .+.+...+ ...+.+.......+...+++.|.+|++.++++.|+.+...
T Consensus 314 ---~~~~~~~~l~~ll~~~~-----------~~~~~~~i-~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 378 (455)
T TIGR00892 314 ---SFALLFNGLTHLLCALA-----------GDYTGLVI-YCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVE 378 (455)
T ss_pred ---HHHHHHHHHHHHHHHHh-----------chHHHHHH-HHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHH
Confidence 21 1111222211110 11122222 2222233333344556788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-h-hcchhhhHHHHHHHHHHH
Q 019756 273 WSCSWIVTYTFNFMMQ-W-SSAGTFFIFSGIGFFTVL 307 (336)
Q Consensus 273 ~~g~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~i 307 (336)
.+|+.++|.+.+.+.+ . ++...|.+.+++.+++.+
T Consensus 379 ~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 379 CCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999999999998887 4 466777777766665544
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.46 E-value=6e-12 Score=114.57 Aligned_cols=153 Identities=18% Similarity=0.237 Sum_probs=115.0
Q ss_pred hhHHHHHhHHHHHHHh-CCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCce-eeeeeccccccccccccccccccccc
Q 019756 117 GASAMAYYTSSIFEKA-GASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKP-LLMVITTSRTLFKMFDFVDQRGYENG 191 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~-g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (336)
.......+.|.+.++. +.+.. .......++..++.++.+++.||+|||+ .+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---------------------- 247 (352)
T cd06174 190 GYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLI---------------------- 247 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH----------------------
Confidence 3556666777776665 65554 5667777889999999999999999999 7777
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHH
Q 019756 192 YQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILI 271 (336)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 271 (336)
+.....++....... .. .........+.+.......+....+..|..|++.|++..|+.+..
T Consensus 248 ------~~~~~~i~~~~~~~~-----------~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (352)
T cd06174 248 ------GLLLAALGLLLLALA-----------PS-LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTF 309 (352)
T ss_pred ------HHHHHHHHHHHHHHh-----------cc-HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 666666666655532 11 222233333344444455677789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHH
Q 019756 272 CWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFV 309 (336)
Q Consensus 272 ~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~ 309 (336)
..+|..++|.+.+.+.+ .++...+.+.+++.+++.+..
T Consensus 310 ~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 310 GSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 99999999999999987 778888888888887776654
No 63
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.45 E-value=1.5e-12 Score=120.36 Aligned_cols=161 Identities=14% Similarity=0.076 Sum_probs=122.1
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
........|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~------------------------- 64 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAV------------------------- 64 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHH-------------------------
Confidence 44556667778888888765 66677778889999999999999999999988
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+.++..++....+.. . +...+.....+.+.......+....++.|.+|++.|+++.++......+
T Consensus 65 ---~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 129 (399)
T TIGR00893 65 ---FIVIWGVFTGLQAFA-----------G-AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGL 129 (399)
T ss_pred ---HHHHHHHHHHHHHHH-----------c-CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchH
Confidence 777777766666543 1 1222233333344444445567789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 275 CSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 275 g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
|..+++.+.+.+.+ .+|++.+.+.+++.++..+...+..||+++
T Consensus 130 g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 130 GGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 99999999998777 788888888888777776666666666543
No 64
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.45 E-value=2.6e-12 Score=116.41 Aligned_cols=179 Identities=10% Similarity=0.042 Sum_probs=140.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccc
Q 019756 98 RYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSR 174 (336)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~ 174 (336)
+++++.++..++.....+..-..+..-.|.+.++.+++.. ...+...+..-++-.+.|.++||.+.|..+..
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~----- 99 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF----- 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehH-----
Confidence 4445555555555555555566677778999999888876 67777888889999999999999999999988
Q ss_pred cccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcc
Q 019756 175 TLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSE 254 (336)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 254 (336)
++++.++..+++++. .+...+..+....+.+...-.|.....+..
T Consensus 100 -----------------------gLilsai~nil~Gfs------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~ 144 (448)
T COG2271 100 -----------------------GLILSAIVNILFGFS------------PSLFLFAVLWVLNGWFQGMGWPPCARTITH 144 (448)
T ss_pred -----------------------HHHHHHHHHHHHhhh------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 999999999999864 133344444444555544445566788999
Q ss_pred cCCccchhhhhHHHHHHHHHHHHHHHHHH--HHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 255 IFPINVKASAGSLVILICWSCSWIVTYTF--NFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 255 ~~p~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
++|+++||+..|+.|.+.++|+.+.|.+. +.... .+|...|++.++++++..++.++..+++
T Consensus 145 Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 145 WFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred HcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999988 76666 6899999999999999888877776544
No 65
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.45 E-value=2.2e-12 Score=123.64 Aligned_cols=158 Identities=16% Similarity=0.049 Sum_probs=86.4
Q ss_pred HHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhh
Q 019756 121 MAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQ 196 (336)
Q Consensus 121 ~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (336)
...+.|.++ ++.|.+.. .......++.+++.+++|+++||++||+....-. -...
T Consensus 271 ~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~---------------------~~~~ 329 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRL---------------------WALW 329 (476)
T ss_pred HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhH---------------------HHHH
Confidence 444555554 44587765 5566677888999999999999999774221100 0000
Q ss_pred hhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHH
Q 019756 197 ISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCS 276 (336)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 276 (336)
+...+.++.+.... .. .+.....+...++..+.. ...+..+.+..|+.| +.||++.|+.+..+.+|+
T Consensus 330 ~~~~l~~i~~~~~~------~~-----~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~ 396 (476)
T PLN00028 330 IVQTLGGVFCIWLG------RA-----NSLGAAIVVMILFSIFVQ-AACGATFGIVPFVSR-RSLGVISGLTGAGGNVGA 396 (476)
T ss_pred HHHHHHHHHHHHhc------cc-----chHHHHHHHHHHHHHHHH-HhhhhhcccCcccCh-hhchhhhhhhhccccHHH
Confidence 01111111111111 00 111111122222222211 122334566677655 689999999999888888
Q ss_pred HHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhh
Q 019756 277 WIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 277 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
.+++.+.+.-...++...|.+.+++.++++++.++.
T Consensus 397 ~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 397 VLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 888877652111457778888887777776654443
No 66
>PRK03545 putative arabinose transporter; Provisional
Probab=99.45 E-value=2.8e-12 Score=119.66 Aligned_cols=157 Identities=18% Similarity=0.070 Sum_probs=116.3
Q ss_pred HHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhh
Q 019756 121 MAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQI 197 (336)
Q Consensus 121 ~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (336)
.....|.+.+++|.+.. +......++..++.+..|.++||+|||+++..
T Consensus 28 ~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~---------------------------- 79 (390)
T PRK03545 28 PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIG---------------------------- 79 (390)
T ss_pred HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHH----------------------------
Confidence 33456888899998876 44455666677888899999999999999988
Q ss_pred hhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHH
Q 019756 198 SACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSW 277 (336)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 277 (336)
+.....+++...... .+.+..++. ....+.......+...++++|.+|+++|++++|+......+|..
T Consensus 80 ~~~~~~~~~~~~~~~-----------~~~~~l~~~-r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ 147 (390)
T PRK03545 80 LFVLFIASHVLSALA-----------WNFTVLLIS-RIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMV 147 (390)
T ss_pred HHHHHHHHHHHHHHh-----------ccHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHH
Confidence 777777776666542 122222232 23333333333456678899999999999999999999999999
Q ss_pred HHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 278 IVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 278 ~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
++|.+.+.+.+ .+|++.|++.++++++..+......||.+
T Consensus 148 ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 148 LGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999998877 78999999988888777666666666643
No 67
>PRK10504 putative transporter; Provisional
Probab=99.45 E-value=7.6e-12 Score=119.64 Aligned_cols=155 Identities=16% Similarity=0.127 Sum_probs=96.4
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeee
Q 019756 93 NLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLM 168 (336)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~ 168 (336)
++++++.....+...++... +.....++.|++++. .|.++. .......+..+++..+.+++.||+|||+++.
T Consensus 256 ~l~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~ 331 (471)
T PRK10504 256 KLFRTRTFSLGLAGSFAGRI----GSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLV 331 (471)
T ss_pred HHhcccchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH
Confidence 46666666555443333322 233445566666654 666654 4445555666777788999999999999887
Q ss_pred eecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchh
Q 019756 169 VITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIP 248 (336)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (336)
. +....++.+.++... ... ...+...+.....+.+.+. ..+..
T Consensus 332 ~----------------------------~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~g~~~~~-~~~~~ 374 (471)
T PRK10504 332 A----------------------------TTLGLALVSLLFMLV---ALL-----GWYYLLPFVLFLQGMVNST-RFSSM 374 (471)
T ss_pred H----------------------------HHHHHHHHHHHHHhc---ccc-----ccHHHHHHHHHHHHHHHHH-HHHHH
Confidence 7 666555555444321 100 1111111112222222222 22344
Q ss_pred hhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 249 FVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 249 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
..+..+..|++.|+++.|+.+...++|..+++.+.+.+.+
T Consensus 375 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 375 NTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778889999999999999999999999999999998877
No 68
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.44 E-value=2.4e-12 Score=120.63 Aligned_cols=160 Identities=14% Similarity=0.055 Sum_probs=116.3
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
........|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 31 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~------------------------- 85 (406)
T PRK11551 31 LQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIV------------------------- 85 (406)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH-------------------------
Confidence 45566677888899998876 56667778889999999999999999999888
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+.++..++.+..... .+.+..++ ...+.+.......+....++.|.+|++.|++++++.+....+
T Consensus 86 ---~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 150 (406)
T PRK11551 86 ---SVALFGLFSLATAQA-----------WDFPSLLV-ARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPF 150 (406)
T ss_pred ---HHHHHHHHHHHHHHh-----------ccHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 666666655544432 11122222 233333333334456678899999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 275 CSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 275 g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
|..+++.+...+.+ .+|+..+++.+++.++..+....++||++
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 151 GGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999998877666 67778888877766666665566677764
No 69
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.44 E-value=2.3e-12 Score=121.84 Aligned_cols=200 Identities=15% Similarity=0.123 Sum_probs=114.6
Q ss_pred ccchHHHHHHhHHHHHHHHH-HHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhHHHHH
Q 019756 15 VIPWRILALIGVIPCVLQLI-GLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEARLLN 93 (336)
Q Consensus 15 ~~gWr~~f~i~~i~~~i~~~-~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (336)
..+||+++.+.++.+++..+ ..+..||+++. ++++ ++++.+..+.+++
T Consensus 169 ~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~-----~~~~--------------------------~~~~~~~~~~~~~ 217 (437)
T TIGR00792 169 KFGWFMFALVLALIGVVSLIICFFGTKERYSE-----IPKN--------------------------IEKKLSLKQIFKA 217 (437)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHcCCEecCCC-----CCcc--------------------------cccCCCHHHHHHH
Confidence 46899999997777666554 45667775410 0000 0000111234556
Q ss_pred HhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch--hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeee
Q 019756 94 LFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS--IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVI 170 (336)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~ 170 (336)
+++++..+...+..++...... ....+.+++.+. .+.+.. .......+..+++.++.++++||+|||+.+..
T Consensus 218 l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~- 292 (437)
T TIGR00792 218 LFKNDQLLILCLAYLFYNLAFN----IKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAG- 292 (437)
T ss_pred HhCCHHHHHHHHHHHHHHHHHH----HHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH-
Confidence 6666665554443333322221 222222222221 121111 34455677888999999999999999998877
Q ss_pred cccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhh
Q 019756 171 TTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFV 250 (336)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (336)
+..+.+++....... + ...+...+ ...+.++......+..++
T Consensus 293 ---------------------------~~~~~~~~~~~~~~~---~-------~~~~~~~~-~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 293 ---------------------------GILLMVLGYLIFFFA---G-------SNLPLILV-LIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ---------------------------HHHHHHHHHHHHHHc---c-------hhHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 666555555444321 1 11122222 222222222223456678
Q ss_pred hhcccCC-------ccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 251 IMSEIFP-------INVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 251 ~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
+++|..| .+.+|++.|+.+....+|..+++.+.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888765 5567999999999999999999999999887
No 70
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.44 E-value=1.7e-11 Score=114.97 Aligned_cols=226 Identities=14% Similarity=0.107 Sum_probs=123.4
Q ss_pred hhCc-cchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhHH
Q 019756 12 FGNV-IPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEAR 90 (336)
Q Consensus 12 l~~~-~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (336)
+.+. +|||..|++.++..++..+..+++||+++. +++.++ . +++.++.
T Consensus 153 l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~---~~~~~~---------------------~-------~~~~~~~ 201 (402)
T PRK11902 153 LADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEVP---ARPPRS---------------------L-------GEAVVGP 201 (402)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCccc---ccccch---------------------h-------HHHHHHH
Confidence 4443 599999999777666665656678886531 000000 0 0011234
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchhHHHH---H-HHHHHHHHHHHHHhhhhcCCcee
Q 019756 91 LLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSIGSRG---I-AIIQIPAVITSVLLMDKAGRKPL 166 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~-~~~~~~g~~~~~~l~dr~grr~~ 166 (336)
++++++++..+..++...+...... .......+.+.++.|.+....... . .+..+++.++++++.||+|||+.
T Consensus 202 ~~~l~~~~~~~~~l~~~~l~~~~~~---~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~ 278 (402)
T PRK11902 202 LRDFFSRRGAWALLLLIVLYKLGDA---FAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRS 278 (402)
T ss_pred HHHHHhCcCHHHHHHHHHHHHhHHH---HHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 5667777766665544333322211 111223344556678877633222 2 23578899999999999999987
Q ss_pred eeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHH---HHHHHhhcC
Q 019756 167 LMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFM---GCSAFNSIG 243 (336)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 243 (336)
+.. +.....+.+.........++ ..+....... ++.+.....
T Consensus 279 l~~----------------------------~~~~~~l~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~ 323 (402)
T PRK11902 279 LML----------------------------FGVLQAVSNLGYWVLAVTPK-------HLWTMALAIGIENLCGGMGTAA 323 (402)
T ss_pred HHH----------------------------HHHHHHHHHHHHHHHHhcCC-------cHHHHHHHHHHHHHHHHHHHHH
Confidence 665 44444443332221111110 1122222211 122222222
Q ss_pred ccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHH
Q 019756 244 LAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 244 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~ 310 (336)
..+....++.+.+|.+. .++......++...++.+.+.+.+ .++...|...+.+++++.++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 324 FVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 23444566777766554 455555566777666668888888 8888888888877777665543
No 71
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.44 E-value=6.5e-12 Score=117.77 Aligned_cols=213 Identities=13% Similarity=0.072 Sum_probs=119.5
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHHH-HHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQLI-GLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~-~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+.+..+||+.|++.++..++..+ .++.+||+++.. ++ + .+
T Consensus 152 ~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~----------------~~---------- 200 (406)
T PRK15402 152 LGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRV---GE--K----------------LS---------- 200 (406)
T ss_pred HHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccc---cc--c----------------cc----------
Confidence 4555666666677999999997776665544 445678865310 00 0 00
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
.++...++++.++++..+...+....... .......+.|.++ ++.|.+.. .......++.+++.++.++++
T Consensus 201 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~ 275 (406)
T PRK15402 201 -LKELGRDYKLVLKNRRFVAGALALGLVSL----PLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLT 275 (406)
T ss_pred -HHHHHHHHHHHHcCcHHHHHHHHHHHHHH----HHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111234455666554443333222211 1222333445544 44677654 333445566788899999999
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
||++||+.+.. +.....++...+........ ...+...+.....+.
T Consensus 276 ~r~~~~~~~~~----------------------------~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~g~ 321 (406)
T PRK15402 276 SRRPLRSLIRM----------------------------GLWPMVAGLLLAALATVISS------HAYLWLTAGLSLYAF 321 (406)
T ss_pred HhcCHHHHHHH----------------------------HHHHHHHHHHHHHHHHHccc------ccHHHHHHHHHHHHH
Confidence 99999998777 66666555555543321111 111122222222222
Q ss_pred HhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 239 FNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
+.+.. .+........ .+++.|++..++.+....+|..+++.+.+.+.+
T Consensus 322 g~~~~-~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 322 GIGLA-NAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred HHHHH-hhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 22221 2222333333 344889999999999999999999999998877
No 72
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.43 E-value=1.8e-12 Score=121.00 Aligned_cols=171 Identities=18% Similarity=0.185 Sum_probs=122.5
Q ss_pred HHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccccccccccccc
Q 019756 109 LMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQ 185 (336)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~ 185 (336)
......-.+........|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~---------------- 73 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIP---------------- 73 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHH----------------
Confidence 33344444455666778889999988876 45556667778889999999999999998888
Q ss_pred ccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhh
Q 019756 186 RGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAG 265 (336)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 265 (336)
+.....++....... .+.+...+. ..+.+.......+....++.|.+|++.|+++.
T Consensus 74 ------------~~~~~~i~~~~~~~~-----------~~~~~~~~~-~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~ 129 (392)
T PRK10473 74 ------------GAALFIIASLLCSLA-----------ETSSLFLAG-RFLQGIGAGCCYVVAFAILRDTLDDRRRAKVL 129 (392)
T ss_pred ------------HHHHHHHHHHHHHHh-----------CcHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHH
Confidence 776666666655432 111222222 22233322233455678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCCC
Q 019756 266 SLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKGR 319 (336)
Q Consensus 266 ~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~ 319 (336)
++.+....++..++|.+.+.+.+ .+|...+++.+.+.++..++.....||++++
T Consensus 130 ~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 130 SLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999888766 7788888888888777777666677776543
No 73
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.43 E-value=5.7e-12 Score=117.82 Aligned_cols=157 Identities=13% Similarity=0.182 Sum_probs=116.9
Q ss_pred HHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhh
Q 019756 122 AYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQIS 198 (336)
Q Consensus 122 ~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (336)
....|.+.++.|.+.. .......+...++.+..|.++||+|||+.+.. +
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~----------------------------~ 91 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVIL----------------------------F 91 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHH----------------------------H
Confidence 3456778888898876 44556677788899999999999999999888 7
Q ss_pred hhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHH
Q 019756 199 ACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWI 278 (336)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 278 (336)
..+.+++....... .+.+.. +......+.......+....++.|.+|+++|+.+.++......+|..+
T Consensus 92 ~~~~~~~~~~~~~~-----------~~~~~l-~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~i 159 (394)
T PRK10213 92 AVLLTLSCLLVSFA-----------NSFSLL-LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVI 159 (394)
T ss_pred HHHHHHHHHHHHHH-----------ChHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHH
Confidence 77777766665432 112222 333333343333345677788999999999999999999999999999
Q ss_pred HHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 279 VTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 279 ~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
+|.+.+.+.+ .+|++.|++.+.++++..+......||+++
T Consensus 160 g~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~ 200 (394)
T PRK10213 160 AAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG 200 (394)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc
Confidence 9999999888 788889988877776665555555677543
No 74
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.43 E-value=3.5e-11 Score=112.50 Aligned_cols=221 Identities=13% Similarity=0.113 Sum_probs=122.9
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHHHH-HhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQLIG-LFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~-~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+.+.+|||+.|++.++.+++..+. ...+||+|+. .+
T Consensus 159 ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~------~~----------------------------- 203 (394)
T PRK10213 159 IAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGE------PS----------------------------- 203 (394)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcc------cc-----------------------------
Confidence 56677777777889999999977666654433 3457876520 00
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMD 159 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~d 159 (336)
+++...++.++++..+...+..++..... .....+..|.+.++.|.+.. ......+++.+++.++.+++.|
T Consensus 204 ---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~ 277 (394)
T PRK10213 204 ---HQKQNTFRLLQRPGVMAGMIAIFMSFAGQ---FAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILK 277 (394)
T ss_pred ---cchhHHHHHhcCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00111234555555444433322222211 12223334667777787765 4455666788899999999999
Q ss_pred hcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHH
Q 019756 160 KAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAF 239 (336)
Q Consensus 160 r~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
|.+|+ .+.. +..........+... . ...+.........+.+
T Consensus 278 r~~~~-~l~~----------------------------~~~~~~~~~~~l~~~---~-------~~~~~~~~~~~l~G~~ 318 (394)
T PRK10213 278 RSVKL-ALAG----------------------------APLVLAVSALVLTLW---G-------SDKIVATGVAIIWGLT 318 (394)
T ss_pred ccchh-HHHH----------------------------HHHHHHHHHHHHHHH---h-------hhHHHHHHHHHHHHHH
Confidence 95443 3333 222222221111111 0 1122222333333323
Q ss_pred hhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHH
Q 019756 240 NSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTV 306 (336)
Q Consensus 240 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 306 (336)
+. ...+...+++.+..|+ .++...++......+|..+++.+.+.+.+ .+....+...+.+..+..
T Consensus 319 ~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 319 FA-LVPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HH-hhhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 22 2234445577777774 46677777788889999999999999998 666555555555444433
No 75
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.42 E-value=1.3e-12 Score=125.19 Aligned_cols=165 Identities=16% Similarity=0.222 Sum_probs=127.6
Q ss_pred HhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccc
Q 019756 114 QFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYEN 190 (336)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (336)
............|.+.++.|.+.. +......++..++.++.|+++||+|||+.++.
T Consensus 14 ~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~--------------------- 72 (485)
T TIGR00711 14 AVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLI--------------------- 72 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHH---------------------
Confidence 333456677788999999988765 67777888899999999999999999999888
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHH
Q 019756 191 GYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVIL 270 (336)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 270 (336)
+..+..++..+.+.. .+...++....+.+.......+...+++.|.+|++.|+++.++...
T Consensus 73 -------~~~~~~~~~~~~~~~------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 133 (485)
T TIGR00711 73 -------STFAFTLGSLLCGVA------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGL 133 (485)
T ss_pred -------HHHHHHHHHHHHhCc------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 777777777666532 1122333344444444445566778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 271 ICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 271 ~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
...+|..++|.+.+.+.+ .+|++.|++.+.+.++..++..+..||+++
T Consensus 134 ~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 134 TVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred HHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 999999999999998888 789999988887777777666666776543
No 76
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.42 E-value=7.8e-12 Score=116.55 Aligned_cols=172 Identities=16% Similarity=0.137 Sum_probs=120.1
Q ss_pred HHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccccccccc
Q 019756 105 IGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFD 181 (336)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~ 181 (336)
....+..+.............|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~------------ 82 (405)
T TIGR00891 15 SAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVT------------ 82 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH------------
Confidence 333344444444466677778888888988765 56667778889999999999999999999888
Q ss_pred ccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccch
Q 019756 182 FVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVK 261 (336)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 261 (336)
+.+..+++.+..... . +...+.....+.+....+..+...+++.|.+|+++|
T Consensus 83 ----------------~~~~~~~~~~~~~~~-----------~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~ 134 (405)
T TIGR00891 83 ----------------SIVLFSAGTLACGFA-----------P-GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLR 134 (405)
T ss_pred ----------------HHHHHHHHHHHHHHh-----------c-cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhh
Confidence 766666666665532 1 122223333334444444456667889999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH-hh--cchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 262 ASAGSLVILICWSCSWIVTYTFNFMMQ-WS--SAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 262 ~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~--~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
+++.++.+....+|..+++.+.+.+.+ .+ |++.+.+.++..++. ++.....||++
T Consensus 135 ~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~ 192 (405)
T TIGR00891 135 NKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAE 192 (405)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 999999999999999999999888776 33 777776655444443 33445567764
No 77
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.41 E-value=5.5e-12 Score=118.67 Aligned_cols=160 Identities=14% Similarity=0.073 Sum_probs=116.9
Q ss_pred HHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 119 SAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 119 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
.....-+|.+.++++.+.. +......++..++.+..|+++||+|||+++..
T Consensus 33 ~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~-------------------------- 86 (413)
T PRK15403 33 DLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLIT-------------------------- 86 (413)
T ss_pred HhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHH--------------------------
Confidence 3444445667778888766 55566677888899999999999999999888
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSC 275 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 275 (336)
+..+.+++....... .+.+.. +....+.+.......+..+.++.|.+|++.|++++++.+....++
T Consensus 87 --~~~~~~~~~~~~~~a-----------~~~~~l-~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (413)
T PRK15403 87 --GALIFTLACAATLFT-----------TSMTQF-LIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVA 152 (413)
T ss_pred --HHHHHHHHHHHHHHc-----------CCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 776666666655532 111222 223333333222233455688899999999999999999999999
Q ss_pred HHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 276 SWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 276 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
..++|.+.+.+.+ .+|++.|++.+++.+++.+..++.+||+++
T Consensus 153 ~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 153 PIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 9999999988887 689999999888888777666666788754
No 78
>PRK03699 putative transporter; Provisional
Probab=99.41 E-value=9.6e-12 Score=116.26 Aligned_cols=152 Identities=9% Similarity=0.022 Sum_probs=98.0
Q ss_pred hHHHHHhHHHHHH-HhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 118 ASAMAYYTSSIFE-KAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 118 ~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
......|.|.+.+ +.|.+.. .......++..+|.++.++++||++||+.+..
T Consensus 221 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~------------------------ 276 (394)
T PRK03699 221 QLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTV------------------------ 276 (394)
T ss_pred HHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHH------------------------
Confidence 4455677887774 4687765 44555667789999999999999999988766
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
......+...+... .+ +.....+.... .++...+..+...++..|..|. .++...+.......
T Consensus 277 ----~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 339 (394)
T PRK03699 277 ----LAGLALVLMYLFVN----TD-------DPSHLLYAILG-LGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGT 339 (394)
T ss_pred ----HHHHHHHHHHHHHH----cC-------CchHHHHHHHH-HHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhh
Confidence 44433333322221 11 11111122222 2222223334445666776664 46778888888999
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHH
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~ 310 (336)
+|..++|.+.+.+.+ .++...+++.+++..++.+.+.
T Consensus 340 ~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (394)
T PRK03699 340 IGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCI 377 (394)
T ss_pred HHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHH
Confidence 999999999999988 7788888877777766655433
No 79
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.41 E-value=7.5e-12 Score=114.31 Aligned_cols=158 Identities=16% Similarity=0.102 Sum_probs=135.7
Q ss_pred hhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 117 GASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
.-+...-.+|.+.++++.+.. +..+.+..+..++.++...++||+.||++++.
T Consensus 28 tEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~------------------------ 83 (394)
T COG2814 28 TEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLG------------------------ 83 (394)
T ss_pred HHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHH------------------------
Confidence 355666778999999999887 77788888999999999999999999999998
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
...++.++..+.++. .++..++....+.+.....+.++..++..++.|+++|++++++......
T Consensus 84 ----~l~lFi~~n~l~alA------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~t 147 (394)
T COG2814 84 ----LLALFIVSNLLSALA------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLT 147 (394)
T ss_pred ----HHHHHHHHHHHHHHh------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHH
Confidence 888888888888764 3344445555555555556677888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhcc
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
+...++..+..++-| ++|+.+|+..+.+++++.+..+..+|
T Consensus 148 lA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 148 LATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999 99999999999999999999888889
No 80
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.40 E-value=4.7e-12 Score=121.96 Aligned_cols=175 Identities=14% Similarity=0.128 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccc
Q 019756 104 IIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMF 180 (336)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~ 180 (336)
+....+..+......+....-.|.+.+++|.+.+ +......++...+.+..|+++||+|||+.+..
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~----------- 76 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLML----------- 76 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH-----------
Confidence 3333444444444566777788999999988664 66677777888888999999999999999998
Q ss_pred cccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccC-Ccc
Q 019756 181 DFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIF-PIN 259 (336)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~ 259 (336)
+.....++++..+.. .+.+..+++ ..+.+....+..+.....+.+.+ |++
T Consensus 77 -----------------~~~~~~~~~~~~~~a-----------~~~~~li~~-r~l~G~g~~~~~~~~~~~l~~~~~~~~ 127 (495)
T PRK14995 77 -----------------GGTLFGLASLAAAFS-----------PTASWLIAT-RALLAIGAAMIVPATLAGIRATFTEEK 127 (495)
T ss_pred -----------------HHHHHHHHHHHHHHc-----------CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 888888887777643 122333333 33333333333444455565655 788
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 260 VKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 260 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
+|+++.|+......+|..++|.+.+.+.+ .+|++.|++...++++..++..+++||.++
T Consensus 128 ~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 128 QRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999988 789999998888877777777777777543
No 81
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.39 E-value=7.4e-12 Score=118.41 Aligned_cols=255 Identities=12% Similarity=0.087 Sum_probs=157.5
Q ss_pred hhHHHHHhhCc-cchHHHHHHhHHHHHHHHHHHh-cCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 5 GCSLAYFFGNV-IPWRILALIGVIPCVLQLIGLF-FIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 5 G~~l~~~l~~~-~gWr~~f~i~~i~~~i~~~~~~-~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+..+++.+... +||+.+|++.++.+++..++++ +.-|+|.- +.+ -.++|.+.+++...+
T Consensus 180 ~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~---h~~----------------is~~El~~I~~~k~~ 240 (466)
T KOG2532|consen 180 TMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK---HPN----------------ISEKELKYIEKGKSE 240 (466)
T ss_pred HHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc---CCC----------------CCHHHHHHHHhcccc
Confidence 34445555555 8999999999988888877765 45677741 111 122233333332222
Q ss_pred hhch--hhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHH
Q 019756 83 SQKH--SEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVL 156 (336)
Q Consensus 83 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~ 156 (336)
++.+ .+.+++++++++..+..++. .+....+...+..|.|.++++ ++++.. ...++..+...+..+++|.
T Consensus 241 ~~~~~~~~vP~~~i~ts~~vwai~~~----~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~ 316 (466)
T KOG2532|consen 241 AHVKKKPPVPYKAILTSPPVWAIWIS----AFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQ 316 (466)
T ss_pred cccCCCCCCCHHHHHcCHHHHHHHHH----HHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 2222 46689999988776666544 333444577888888888876 566543 7788888999999999999
Q ss_pred hhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHH
Q 019756 157 LMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGC 236 (336)
Q Consensus 157 l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (336)
++||.-+| .+-. +...|+++.. +..+.+++++.++.. . ....+..++.+.+.
T Consensus 317 lsD~l~~~-~ls~----t~~rkifn~i--------------~~~~~ai~l~~l~~~---~------~~~~~~a~~~l~~~ 368 (466)
T KOG2532|consen 317 LSDRLTFR-ILSE----TTVRKIFNTI--------------AFGGPAVFLLVLAFT---S------DEHRLLAVILLTIA 368 (466)
T ss_pred HHHHHhhc-cCch----HhHHHHHHhH--------------HHHHHHHHHHeeeec---C------CCcchHHHHHHHHH
Confidence 99999876 3322 2333433333 555555555554432 1 11112222222221
Q ss_pred HHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH----hhcchhhhHHHHHHHHHHHHHHhh
Q 019756 237 SAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ----WSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 237 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
.+..+.. .+-.+.-..|. .+++.+..+|+.+....+.++++|.+.+.+.. ..|...|++.+++.+++.++..++
T Consensus 369 ~~~~g~~-~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 369 IGLSGFN-ISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHcccc-hhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 1222211 11112222232 55788999999999999999999999998883 478889999999888887654444
No 82
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.39 E-value=9.3e-12 Score=117.35 Aligned_cols=143 Identities=20% Similarity=0.165 Sum_probs=107.7
Q ss_pred hhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 117 GASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
......+..|.+.++.|.+.. .......++..++.++.|+++||+|||+.+..
T Consensus 33 ~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~------------------------ 88 (426)
T PRK12307 33 DFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW------------------------ 88 (426)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH------------------------
Confidence 345566677888888888765 55666778889999999999999999999988
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+.+..+++....+.. . +...+.....+.+....+..+....++.|.+|++.|+++.++......
T Consensus 89 ----~~~~~~~~~~~~~~~-----------~-~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 152 (426)
T PRK12307 89 ----SIVAYSVGTGLSGLA-----------S-GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFG 152 (426)
T ss_pred ----HHHHHHHHHHHHHHH-----------h-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHh
Confidence 877777777766543 1 122223333334443334556667889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHH
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFS 299 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~ 299 (336)
+|.++++.+.+.+.+ .+|.+.+++..
T Consensus 153 lg~~~~~~l~~~l~~~~~w~~~f~i~~ 179 (426)
T PRK12307 153 IGNIIAAYFMPSFAEAYGWRAAFFVGL 179 (426)
T ss_pred HHHHHHHHHHHHHcccCCHHHHHHHHH
Confidence 999999988887777 67878777643
No 83
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.39 E-value=9.2e-12 Score=114.58 Aligned_cols=208 Identities=13% Similarity=0.037 Sum_probs=111.4
Q ss_pred hhHHHHHhhCccc--------hHHHHHHhHHHHHHHHHHHh-cCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHH
Q 019756 5 GCSLAYFFGNVIP--------WRILALIGVIPCVLQLIGLF-FIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAE 75 (336)
Q Consensus 5 G~~l~~~l~~~~g--------Wr~~f~i~~i~~~i~~~~~~-~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 75 (336)
|+.++..+....| ||.+|++.++..++..+..+ ..||+++. ++++ +++
T Consensus 135 ~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~-----~~~~---------------~~~--- 191 (356)
T TIGR00901 135 SGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED-----ASVP---------------KPL--- 191 (356)
T ss_pred HHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc-----cccc---------------hhH---
Confidence 3444444445667 99999998887777665544 45774320 0000 000
Q ss_pred HHHHHHHhhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchhH---HHHHH-HHHHHHH
Q 019756 76 IRDHIEISQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSIG---SRGIA-IIQIPAV 151 (336)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~-~~~~~g~ 151 (336)
+++.+..++++++++..+..........+... .......+.|.+.++.|.+.... ....+ +..+++.
T Consensus 192 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~ 262 (356)
T TIGR00901 192 --------TQAVLKPIREFFQRKNMIQALLLLLLIVLYKL-GDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGG 262 (356)
T ss_pred --------HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHH
Confidence 00112245566665542223222222222222 23344455666666678777632 22223 4567899
Q ss_pred HHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHH
Q 019756 152 ITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLV 231 (336)
Q Consensus 152 ~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (336)
++++++.||+|||+.+.. +.++.++............++.... ......+.
T Consensus 263 ~~~g~l~~r~g~~~~l~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 313 (356)
T TIGR00901 263 LIGGIIMQPLNILYALLL----------------------------FGIVQALTNAGFVWLASNGHHDGIT-FPHLLMLF 313 (356)
T ss_pred HHHHHHHhhhhHHHHHHH----------------------------HHHHHHHHHHHHHHHHhcCcccccc-cchHHHHH
Confidence 999999999999988777 5555555444333221110000000 01112222
Q ss_pred HHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 232 GFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
....+..+......+...++++|.+|+++||+..|+.+...+
T Consensus 314 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 314 LTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 223232333333456678999999999999999999877643
No 84
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.39 E-value=6.2e-11 Score=110.58 Aligned_cols=128 Identities=14% Similarity=0.155 Sum_probs=70.4
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHH-HHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQL-IGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~-~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+....|||+.|++.++..++.. +..+++||++.. +.++ +
T Consensus 142 ~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~-----------~---------------- 189 (392)
T PRK10473 142 LAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA-----RAPA-----------A---------------- 189 (392)
T ss_pred HHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc-----ccCC-----------c----------------
Confidence 455555555567799999999776655544 445667886421 0000 0
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHH-HHHhCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSI-FEKAGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
+...+..++.++++..+...+...+.... ......+.|.+ .++.|.+.. ......++..+++.+..+++.
T Consensus 190 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~ 263 (392)
T PRK10473 190 --SSKPRENSESLLNRFFLSRLVITTLSVTV----ILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFAL 263 (392)
T ss_pred --cchHHHHHHHHhCHHHHHHHHHHHHHHHH----HHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001122334444333322222111111 11223333443 345677765 344566777889999999999
Q ss_pred hhcCCceeeee
Q 019756 159 DKAGRKPLLMV 169 (336)
Q Consensus 159 dr~grr~~l~~ 169 (336)
||+|||+.+..
T Consensus 264 ~r~g~~~~~~~ 274 (392)
T PRK10473 264 GIFKPRTLMLT 274 (392)
T ss_pred HhcCHHHHHHH
Confidence 99999998877
No 85
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.39 E-value=1.5e-11 Score=115.42 Aligned_cols=161 Identities=12% Similarity=0.141 Sum_probs=116.7
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
...+....|.+.++++.+.. .......++..++.++.|.++||+|||+.+..
T Consensus 29 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~------------------------- 83 (406)
T PRK15402 29 NDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLA------------------------- 83 (406)
T ss_pred hhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH-------------------------
Confidence 44455556778888888766 45566777888899999999999999999887
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+.....+++...... .+.+. ++....+.+.......+....++.|.+|++.|+++.++......+
T Consensus 84 ---~~~~~~~~~~~~~~~-----------~~~~~-l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 148 (406)
T PRK15402 84 ---GVAFFILTCLAILLA-----------QSIEQ-FTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALL 148 (406)
T ss_pred ---HHHHHHHHHHHHHHH-----------ccHHH-HHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHH
Confidence 766666666655432 11122 222233333322233456678889999999999999999888888
Q ss_pred HHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 275 CSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 275 g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
+..++|.+.+.+.+ .+|++.+++.+++.+++.+..+...||+++
T Consensus 149 ~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 149 APLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 99999999988877 788888988888887777666666787653
No 86
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.38 E-value=1.2e-11 Score=118.56 Aligned_cols=156 Identities=12% Similarity=-0.033 Sum_probs=106.5
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
......+.|.+.+++|.+.. .......++..++.++.|+++||+|||+.+..
T Consensus 52 ~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~------------------------- 106 (476)
T PLN00028 52 TFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAF------------------------- 106 (476)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH-------------------------
Confidence 44566677888899998766 44555667788899999999999999998877
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+.+..+++.++.+.. .+.+...+... +.++...+. .....+++|.+|+++|+++.|+.+....+
T Consensus 107 ---~~~~~~~~~~~~~~~-----------~s~~~l~~~r~-l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~ 170 (476)
T PLN00028 107 ---LLMLTAPAVFCMSLV-----------SSATGFIAVRF-FIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNL 170 (476)
T ss_pred ---HHHHHHHHHHHHHHh-----------cCHHHHHHHHH-HHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHH
Confidence 666666665554432 11122222222 222222222 23346789999999999999999988888
Q ss_pred HHHHHHHHHHHHHH----------hhcchhhhHHHHHHHHHHHHHHhhcc
Q 019756 275 CSWIVTYTFNFMMQ----------WSSAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 275 g~~~~~~~~~~l~~----------~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
|+.+++.+.+.+.. .+|++.|.+.+++.++..++.+++.+
T Consensus 171 g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 171 GGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88877776654432 36888999988888777666555443
No 87
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.38 E-value=7.6e-12 Score=120.48 Aligned_cols=243 Identities=9% Similarity=-0.015 Sum_probs=133.6
Q ss_pred chhhHHHHHhhCccchHHHHHHhHHHHHHHH-HHHhcCCCChHHHHhcCCHHHHHHH------------HHHHhCCCcch
Q 019756 3 TFGCSLAYFFGNVIPWRILALIGVIPCVLQL-IGLFFIPESPRWLVKIGKEKEFETT------------LQNLRGKGADI 69 (336)
Q Consensus 3 ~~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~-~~~~~lpEsp~~l~~~~~~~~a~~~------------~~~~~~~~~~~ 69 (336)
.+|+.++..+.+..||||.|++....+++.. +..+++||+|+- ++++.|..... +++..+.....
T Consensus 145 ~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~--~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 222 (495)
T PRK14995 145 AFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGR--RDQPLNLGHALMLIVAILLLVYSAKTALKGFLSL 222 (495)
T ss_pred HHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CCCCCChHhHHHHHHHHHHHHHHHHhccccCCch
Confidence 4677777778888899999999776655554 445667887631 11111111110 01000000000
Q ss_pred HHHHHH-------HHH-HHHHhhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---
Q 019756 70 SQEAAE-------IRD-HIEISQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS--- 137 (336)
Q Consensus 70 ~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~--- 137 (336)
...... ... ...+.+..++.-..++++++......+..+.... ......++.|..++. .|.++.
T Consensus 223 ~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~lq~v~g~s~~~ag 298 (495)
T PRK14995 223 WVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMI----TLVGFELLMAQELQFVHGLSPLEAG 298 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 000000 000 0001111111112356666554443332222222 233444566655544 577765
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
.......+...++.++.|++.||+|||+.+.. +....+++...+... ..+
T Consensus 299 ~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~----------------------------g~~~~~~~~~~l~~~--~~~ 348 (495)
T PRK14995 299 MFMLPVMVASGFSGPIAGILVSRLGLRLVATG----------------------------GMALSALSFYGLAMT--DFS 348 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCchHHHHH----------------------------HHHHHHHHHHHHHHh--cCC
Confidence 55666778888999999999999999988776 665555555444321 111
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
...+.........+.+.+ ...+.....+.+..|++.++.+.++.+....+|+.+++.+.+.+.+
T Consensus 349 ------~~~~~~~~~~~l~G~g~g-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 349 ------TQQWQAWGLMALLGFSAA-SALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred ------CchHHHHHHHHHHHHhHH-HHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222222222222222 2233445677788999999999999999999999999999988876
No 88
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.37 E-value=1.9e-11 Score=116.36 Aligned_cols=161 Identities=12% Similarity=-0.019 Sum_probs=108.1
Q ss_pred HHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhh
Q 019756 120 AMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQ 196 (336)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (336)
.+.+..|++.++ |.+.. +......++..++.++.|+++||+|||+++..
T Consensus 47 ~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~--------------------------- 98 (452)
T PRK11273 47 NFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPA--------------------------- 98 (452)
T ss_pred HHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHH---------------------------
Confidence 356677877766 87765 56667777888999999999999999998888
Q ss_pred hhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHH
Q 019756 197 ISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCS 276 (336)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 276 (336)
+.++.+++++.++..... ..+...++....+.+.......+.....+.|.+|+++|++++|+.+....+|+
T Consensus 99 -~~~~~~i~~~~~~~~~~~--------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 169 (452)
T PRK11273 99 -GLILAAAVMLFMGFVPWA--------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGG 169 (452)
T ss_pred -HHHHHHHHHHHHHhhhcc--------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhh
Confidence 777777666655542110 11122222222233333333334445778899999999999999999888886
Q ss_pred H-HHHHHHHHHH-HhhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 277 W-IVTYTFNFMM-QWSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 277 ~-~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
. .+|.....+. ..+|+..|++.+++.++..++..+++||+.
T Consensus 170 ~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 170 GLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 4 4554432232 257788888888777776666667777653
No 89
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.37 E-value=2.4e-11 Score=116.33 Aligned_cols=151 Identities=12% Similarity=0.016 Sum_probs=106.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
+......++..++.++.|+++||+|||+++.. +..+..++.+..+.......
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~----------------------------~~~l~~i~~~~~~~~~~~~~ 110 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKI----------------------------AAVLFFISALGSAWPEFGFT 110 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH----------------------------HHHHHHHHHHHHHhhccccc
Confidence 66777788899999999999999999999988 77777666665553211110
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH---------H
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMM---------Q 288 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~---------~ 288 (336)
....+....+..++....+.+....+..+...++++|.+|+++|+.++++......+|..+++.+...+. .
T Consensus 111 ~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 190 (479)
T PRK10077 111 SIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNT 190 (479)
T ss_pred cccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccc
Confidence 0000112223344455555566666667778899999999999999999999998999888877665443 2
Q ss_pred hhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 289 WSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
.+|++.|++.++..++..+ ..+++||+.
T Consensus 191 ~gWr~~f~~~~~~~~~~~~-~~~~l~~s~ 218 (479)
T PRK10077 191 DGWRYMFASEAIPALLFLM-LLYFVPETP 218 (479)
T ss_pred CChHHHHHHHHHHHHHHHH-HHHcCCCCc
Confidence 5788888887776666554 456678874
No 90
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.37 E-value=3.9e-12 Score=117.24 Aligned_cols=160 Identities=11% Similarity=0.009 Sum_probs=119.6
Q ss_pred hhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 117 GASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
....+....|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~------------------------ 65 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPI------------------------ 65 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHH------------------------
Confidence 355666777888888888776 56667778889999999999999999999988
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+..+.+++.++.... . +...++....+.+.......+...+++.|.+|+++|+++.++.+....
T Consensus 66 ----~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 129 (379)
T TIGR00881 66 ----GLILCAIVNLFFGFS-----------T-SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHN 129 (379)
T ss_pred ----HHHHHHHHHHHHHHh-----------h-hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccch
Confidence 777777777666543 1 122233333444444444567778899999999999999999999999
Q ss_pred HHHHHHH-HHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 274 SCSWIVT-YTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 274 ~g~~~~~-~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
+|..++| .+...+.+ .+|+..+++.+.+.++..++...+.||+
T Consensus 130 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 130 VGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred hHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCC
Confidence 9999999 45555555 6788888888877777666666666654
No 91
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.8e-12 Score=118.61 Aligned_cols=181 Identities=14% Similarity=0.093 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccc
Q 019756 102 SLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFK 178 (336)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~ 178 (336)
..+....+....++.--+.+..-.+.+.+.++.+++ +......++..+.+.++|++.||++||+++.+
T Consensus 33 ~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v--------- 103 (493)
T KOG1330|consen 33 LTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV--------- 103 (493)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEee---------
Confidence 334444444454444455555556666666777765 77888889999999999999999999999999
Q ss_pred cccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCc
Q 019756 179 MFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPI 258 (336)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 258 (336)
|..+..++.+..++. ..+..++....+.+.+-..+.++...+++|.||.
T Consensus 104 -------------------G~~iW~~Av~~~~fs------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~ 152 (493)
T KOG1330|consen 104 -------------------GIFIWTLAVFASGFS------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPD 152 (493)
T ss_pred -------------------HHHHHHHHHHHHHHH------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcc
Confidence 888888888887754 1233334444555666667788999999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHHHHHHhhccCCCCCCHH
Q 019756 259 NVKASAGSLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTVLFVAKIVPETKGRTLE 322 (336)
Q Consensus 259 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~~~~ 322 (336)
.+|+++.++.+.....|..++-.+...+.+ ..|++.|...+++.++++++..++.+|.+++..+
T Consensus 153 ~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~ 218 (493)
T KOG1330|consen 153 DKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARD 218 (493)
T ss_pred hhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccccc
Confidence 999999999999999999998888887777 4499999999999999999999998887654333
No 92
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.36 E-value=1.4e-11 Score=114.64 Aligned_cols=161 Identities=14% Similarity=0.099 Sum_probs=119.4
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
........|.+.++.|.+.. +......++..++.+..|++.||+|||+.+..
T Consensus 19 ~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~------------------------- 73 (382)
T PRK10091 19 EFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLF------------------------- 73 (382)
T ss_pred HHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH-------------------------
Confidence 34555677888889988765 56677888899999999999999999999988
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+....+++.++.+.. .+.+...+. ..+.+.......+....++.|++|+++|+.++++......+
T Consensus 74 ---~~~~~~~~~~l~~~~-----------~~~~~l~~~-r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (382)
T PRK10091 74 ---LVALCVIGNAMFTLS-----------SSYLMLAIG-RLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTV 138 (382)
T ss_pred ---HHHHHHHHHHHHHHh-----------CcHHHHHHH-HHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHH
Confidence 777777776666532 112222232 23333322222345567788999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 275 CSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 275 g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
|..++|.+.+.+.+ .+|++.|.+.+.+.++..+......||.++
T Consensus 139 g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~ 183 (382)
T PRK10091 139 ANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD 183 (382)
T ss_pred HHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 99999999888877 788899998888777766666666787644
No 93
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.36 E-value=4.3e-12 Score=115.94 Aligned_cols=159 Identities=15% Similarity=0.127 Sum_probs=116.8
Q ss_pred hHHHHHhHH-HHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 118 ASAMAYYTS-SIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 118 ~~~~~~~~~-~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
........| .+.++.|.+.. +......+...++.+..|+++||+|||+.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~------------------------ 67 (352)
T PF07690_consen 12 FSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLII------------------------ 67 (352)
T ss_dssp HHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHH------------------------
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEee------------------------
Confidence 444555566 67777887766 66667778889999999999999999998887
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+.++.++++....+. ...+ .++....+.+.......+....++.|.+|+++|+++.++......
T Consensus 68 ----~~~~~~~~~~~~~~~-----------~~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 131 (352)
T PF07690_consen 68 ----GLLLFALGSLLLAFA-----------SNFW-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFS 131 (352)
T ss_dssp ----HHHHHHHHHHHHHHH-----------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHH
T ss_pred ----hhhhhhhHHHHhhhh-----------hhHH-HHhhhccccccccccccccccccccccchhhhhhhccccccchhh
Confidence 777777774444421 1122 333344444444444566778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
+|..++|.+.+.+.+ .+|+..+++.+++.++..++...+.+++
T Consensus 132 ~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 132 LGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEP 175 (352)
T ss_dssp HHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---
T ss_pred hhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhc
Confidence 999999999998886 7888999999998888877544554443
No 94
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.36 E-value=1.2e-10 Score=107.94 Aligned_cols=208 Identities=14% Similarity=0.188 Sum_probs=108.1
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHH-HHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQL-IGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~-~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+.+.++||+.|++.++..++.. +..+++||+++- +++ ++.+.
T Consensus 130 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~----------~~~~~------------- 180 (377)
T PRK11102 130 LAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPK------ERR----------QPFHL------------- 180 (377)
T ss_pred HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCcc------ccc----------CCCCh-------------
Confidence 445555555566799999999777666554 445677886420 000 00000
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHH-HHHhCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSI-FEKAGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
++...++++.++++......+...+ .+.+......+.|.+ .+..|.+.. .......+..+++.++.+++.
T Consensus 181 --~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~ 254 (377)
T PRK11102 181 --RTTIRNFASLFRHKRVLGYMLASGF----SFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFV 254 (377)
T ss_pred --HHHHHHHHHHHcChHHHHHHHHHHH----HHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011233445555443333222211 122233333344444 344677665 455666777889999999999
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
||+|||+.+.. +.....+............ ...+...+....+..
T Consensus 255 ~r~g~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 299 (377)
T PRK11102 255 RRVGALNMLRF----------------------------GLWIQFIMGIWLVVSALLD-------LGFWALVVGVAAFVG 299 (377)
T ss_pred HHhCHHHHHHH----------------------------HHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHH
Confidence 99999998776 5544333222222111000 111222222222222
Q ss_pred HhhcCccchhhhhhcccCCccchhhhhHHHHHHHH-HHHHHHHHHH
Q 019756 239 FNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW-SCSWIVTYTF 283 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~~~~~ 283 (336)
... ...+....+..|..| +.|+++.++.+.... +|..+++.+.
T Consensus 300 ~~~-~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 300 CVS-MISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHH-HhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 122333456778777 789999998877644 4555555553
No 95
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.35 E-value=2.9e-11 Score=114.62 Aligned_cols=171 Identities=11% Similarity=-0.031 Sum_probs=113.8
Q ss_pred HHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccccccccccccc
Q 019756 109 LMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQ 185 (336)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~ 185 (336)
+.....+..........|.+.+ .|.+.. +......++..++.+..|+++||+|||+.+..
T Consensus 34 ~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~---------------- 96 (438)
T TIGR00712 34 FGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPA---------------- 96 (438)
T ss_pred HHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHH----------------
Confidence 3333333333344555666554 577765 56667778888999999999999999998887
Q ss_pred ccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhh
Q 019756 186 RGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAG 265 (336)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 265 (336)
+.+..+++.+...... .. ..+...+.....+.+.......+.....+.|.+|+++|++++
T Consensus 97 ------------~~~~~~~~~~~~~~~~---~~-----~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~ 156 (438)
T TIGR00712 97 ------------GLILSAAVMLLMGFVP---WA-----TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIV 156 (438)
T ss_pred ------------HHHHHHHHHHHHhccc---cc-----cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHH
Confidence 6666666665544221 00 011222222222223322223344567888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 266 SLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 266 ~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
|+.+....+|+.+++.+.+...+ .+|+..|++.++++++..+..++++||+
T Consensus 157 ~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 157 SIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999988877765443 5788889988888877776666666765
No 96
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.35 E-value=1.6e-10 Score=107.49 Aligned_cols=144 Identities=15% Similarity=0.117 Sum_probs=98.2
Q ss_pred HHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhh
Q 019756 121 MAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQI 197 (336)
Q Consensus 121 ~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (336)
...+.|.+.++.|.+.. .......+..+++.+..+++.||+|||+.+..
T Consensus 219 ~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~---------------------------- 270 (381)
T PRK03633 219 LYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRV---------------------------- 270 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHH----------------------------
Confidence 33456777777787765 34456667788999999999999999988776
Q ss_pred hhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHH
Q 019756 198 SACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSW 277 (336)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 277 (336)
+.....+++..+. .. .. .. ..... .+....+..+...+++.|..|++.++...+..+....+|..
T Consensus 271 ~~~~~~~~~~~~~-----~~------~~-~~--~~~~l-~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~ 335 (381)
T PRK03633 271 QVFVVILGSIAML-----SQ------AA-MA--PALFI-LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSL 335 (381)
T ss_pred HHHHHHHHHHHHh-----hh------HH-HH--HHHHH-HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5555544443322 00 01 11 11111 11122234466678888999988888888888888899999
Q ss_pred HHHHHHHHHHH-hhcchhhhHHHHHHHHHHH
Q 019756 278 IVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVL 307 (336)
Q Consensus 278 ~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i 307 (336)
++|.+.+.+.| .++.+.|.+.+.+.++..+
T Consensus 336 igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~ 366 (381)
T PRK03633 336 LGPSFTAMLMQNYSDNLLFIMIASVSFIYLL 366 (381)
T ss_pred HHHHHHHHHHHHhCccHHHHHHHHHHHHHHH
Confidence 99999999988 7777778877777665544
No 97
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.35 E-value=2.9e-11 Score=112.89 Aligned_cols=160 Identities=9% Similarity=0.099 Sum_probs=112.9
Q ss_pred HHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 119 SAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 119 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
.......|.+.++.+.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 25 ~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~-------------------------- 78 (394)
T PRK11652 25 TIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILV-------------------------- 78 (394)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHH--------------------------
Confidence 3444456778888998876 55666777888999999999999999998887
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSC 275 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 275 (336)
+.....++.+..... .+.+.. .....+.+.......+....+..|.+|.+.|+.+.+..+....++
T Consensus 79 --~~~~~~~~~~~~~~~-----------~~~~~l-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (394)
T PRK11652 79 --GMSIFILGTLVALFA-----------HSLTVL-IAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVS 144 (394)
T ss_pred --HHHHHHHHHHHHHHH-----------ccHHHH-HHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 666666655554321 111222 222222222222223445567889999999999999999999999
Q ss_pred HHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 276 SWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 276 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
..++|.+.+.+.+ .+|+..+.+.+++.++..+...++.||+++
T Consensus 145 ~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 145 PLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 9999999998887 688888888877776666555666787654
No 98
>PRK10504 putative transporter; Provisional
Probab=99.34 E-value=2.8e-11 Score=115.74 Aligned_cols=160 Identities=13% Similarity=0.087 Sum_probs=117.4
Q ss_pred hhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 117 GASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
.......+.|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~------------------------ 80 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFT------------------------ 80 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH------------------------
Confidence 355667788999999998876 44556667778899999999999999998887
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+..+.+++....... .+.+.. +....+.+.......+...+++.|.+|++.|+++.++.+....
T Consensus 81 ----~~~~~~~~~~~~~~~-----------~~~~~l-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (471)
T PRK10504 81 ----AIVLFTLGSLFCALS-----------GTLNEL-LLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQ 144 (471)
T ss_pred ----HHHHHHHHHHHHHHh-----------CCHHHH-HHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 666666655544321 111222 2233333333333456677889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
+|..++|.+.+.+.+ .+|++.|.+...+..+..+......|+.
T Consensus 145 ~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 145 VGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 999999999999888 7888888887777776666666665654
No 99
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.34 E-value=2.2e-11 Score=116.71 Aligned_cols=156 Identities=13% Similarity=0.045 Sum_probs=97.2
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeee
Q 019756 93 NLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLM 168 (336)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~ 168 (336)
+.++++..+...+..+.... ......++.|.++++ .|.+.. .......++.+++.++++++.||+|||+.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~ 325 (485)
T TIGR00711 250 RLFKYRNFTIGCVYMSLLGL----GLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVT 325 (485)
T ss_pred HHHcCCChHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHH
Confidence 45666555544433333222 233445566666654 577664 5556677888999999999999999999877
Q ss_pred eecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchh
Q 019756 169 VITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIP 248 (336)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (336)
. +..+.++++..+.... .++ ...+.......+.+.+.+.. .+..
T Consensus 326 ~----------------------------g~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~l~g~g~~~~-~~~~ 369 (485)
T TIGR00711 326 I----------------------------GLILYAVGFYWRAFTF-TPD------TPFLAIALPQFIRGFGMGCF-FMPL 369 (485)
T ss_pred H----------------------------HHHHHHHHHHHHhccC-CCC------CCHHHHHHHHHHHHHHHHHH-HHHH
Confidence 7 6666666555544211 010 11111122222222222211 2233
Q ss_pred hhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 249 FVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 249 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
.....|..|++.|+++.|+.+....+|+.+++.+.+.+.+
T Consensus 370 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 370 TTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677899999999999999999999999999988876
No 100
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.34 E-value=1.5e-10 Score=108.28 Aligned_cols=237 Identities=9% Similarity=-0.019 Sum_probs=129.1
Q ss_pred chhhHHHHHhhCccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 3 TFGCSLAYFFGNVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 3 ~~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
.+|+.+++++.+. .|+..+.+.+...++..+..+.+||+|+.. ++++++ .....++
T Consensus 138 ~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~--~~~~~~--------------~~~~~~~------- 193 (393)
T PRK11195 138 LLGTVLGGALADP-HAEAALAVCALIYLLAALFNLFIPRLGARR--PGQSWN--------------PIALLRD------- 193 (393)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCcccc--cccCCC--------------HHHHHHH-------
Confidence 3566666666553 477777776655555556667789876321 000000 0000000
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
.....+.+++++..+.......+.... .....+..+... +..|.++. ......+++.+++.+..+++.
T Consensus 194 ----~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~ 265 (393)
T PRK11195 194 ----FFHACRVLWRDKLGRFSLAGTTLFWGA----GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLV 265 (393)
T ss_pred ----HHHHHHHHHhCchhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 011234556666555443332222221 112222233222 23466554 556677788899999999999
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
||.++|+.+.. +. ..++....+.. . .+.+...+.....+.
T Consensus 266 ~~~~~~~~~~~----------------------------g~-~~~~~~~~~~~----~-------~~~~~~~~~~~~~G~ 305 (393)
T PRK11195 266 TLETVLRVLPA----------------------------GI-LMGLVVLLMAL----Q-------HSLLPAYPLLILIGA 305 (393)
T ss_pred cCCcccchHHH----------------------------HH-HHHHHHHHHHH----H-------hHHHHHHHHHHHHHH
Confidence 99988876655 43 22222222111 0 112222222222222
Q ss_pred HhhcCccchhhhhhcccCCccc-hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhh
Q 019756 239 FNSIGLAGIPFVIMSEIFPINV-KASAGSLVILICWSCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
+.+. ..+...+.+.|..|++. +|++.++.+...+++..++..+.+.+...+....+.+.+...+++..+...+
T Consensus 306 ~~g~-~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 306 LGGF-FVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred hhhh-hhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2222 22334566778766655 7999999999999999999999987766777777766666555555554444
No 101
>PRK03699 putative transporter; Provisional
Probab=99.33 E-value=3.5e-11 Score=112.46 Aligned_cols=152 Identities=9% Similarity=-0.020 Sum_probs=109.6
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
........|.+.++.+.+.. .......++..++.++.|++.||+|||+.+..
T Consensus 23 ~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~------------------------- 77 (394)
T PRK03699 23 VIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIF------------------------- 77 (394)
T ss_pred HHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-------------------------
Confidence 45667778889999998876 55566777888999999999999999998887
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+.....++..+.... .+.+...+.....+.+.+ ...+....++.|.+|++.|+.+.+..+....+
T Consensus 78 ---~~~~~~i~~~l~~~~-----------~~~~~~~~~~~l~G~~~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 142 (394)
T PRK03699 78 ---GFALMILAVAGLMFS-----------HSLALFSIAMFVLGVVSG-ITMSIGTFLITHVYEGKQRGSRLLFTDSFFSM 142 (394)
T ss_pred ---HHHHHHHHHHHHHHc-----------chHHHHHHHHHHHHHhhH-hhccchhHHhhhhcccchHHHHHHHHHHHHHH
Confidence 666666666655532 112222222222222222 23345568889999999999999999888888
Q ss_pred HHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHHHHH
Q 019756 275 CSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTVLFV 309 (336)
Q Consensus 275 g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~i~~ 309 (336)
|+.++|.+.+.+.+ .+|++.|.+.+++.++..++.
T Consensus 143 g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 143 AGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 99999998887764 678888888777766655443
No 102
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.33 E-value=1.1e-10 Score=109.93 Aligned_cols=186 Identities=13% Similarity=0.091 Sum_probs=119.4
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceee
Q 019756 91 LLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLL 167 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l 167 (336)
++.+.+++..+...+..++..+ +........|.+.++.+.+.. +......+...++.+..|+++||+|||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l 85 (417)
T PRK10489 10 LSLLKTHPAFRAVFIARFISIF----GLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLI 85 (417)
T ss_pred HHHHHhCCChhhHHHHHHHHHH----HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEE
Confidence 3344455655555444333322 344556667777777766554 666677788889999999999999999999
Q ss_pred eeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccch
Q 019756 168 MVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGI 247 (336)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (336)
.. +....+++...+........ ...+...+ ...+.+.......+.
T Consensus 86 ~~----------------------------~~~~~~~~~~~~~~~~~~~~------~~~~~l~~-~~~~~g~~~~~~~~~ 130 (417)
T PRK10489 86 LL----------------------------ARGTCGLGFIGLALNAFLPE------PSLLAIYL-LGLWDGFFGSLGVTA 130 (417)
T ss_pred Ee----------------------------hHHHHHHHHHHHHHHHHcCC------CcHHHHHH-HHHHHHHHHHHHHHH
Confidence 88 66666665555442211110 11122222 222222222122344
Q ss_pred hhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 248 PFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 248 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
...++.|.+|+++|+++.++.+....+|..++|.+.+.+.+ .++.+.+.+.++..+++.+. ...+||+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 199 (417)
T PRK10489 131 LLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLP-LLRLPAL 199 (417)
T ss_pred HhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 46788999999999999999999999999999999998887 67777777766665555443 4445654
No 103
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.33 E-value=1.7e-10 Score=108.80 Aligned_cols=185 Identities=18% Similarity=0.120 Sum_probs=117.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCcee
Q 019756 90 RLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPL 166 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~ 166 (336)
...+.+|+++.|...+.. +..++++..+.+++|++.++. .+.. .......+...++.+++|+++||+|+|++
T Consensus 244 ~~~~vlk~~~~Wllslly----~~tFG~fvg~s~~lp~~~~~~-~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~v 318 (462)
T PRK15034 244 DQLPVLQRLHLWLLSLLY----LATFGSFIGFSAGFAMLAKTQ-FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRV 318 (462)
T ss_pred HHHHHhCCCchhHHHHHH----HHHHHHHHHHHHHHHHHHHHH-cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHH
Confidence 345667777666555433 444555666777777776552 2221 22334456678888999999999999998
Q ss_pred eeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccc
Q 019756 167 LMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAG 246 (336)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (336)
+.+ +.+.+.++....... .+... ....+.....+..+....+.|..+
T Consensus 319 l~~----------------------------~~i~~~i~~~~~~l~--lp~~~---~~~~~~~~~~~~~l~~~~G~gngs 365 (462)
T PRK15034 319 TLI----------------------------NFIFMAIFSALLFLT--LPGTG---SGNFIAFYAVFMGLFLTAGLGSGS 365 (462)
T ss_pred HHH----------------------------HHHHHHHHHHHHHHH--hcccc---ccHHHHHHHHHHHHHHHhcccchH
Confidence 887 666555554333222 11110 011222333333333334444333
Q ss_pred hhhhhhcccCCc---------------------cchhhhhHHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHH
Q 019756 247 IPFVIMSEIFPI---------------------NVKASAGSLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGF 303 (336)
Q Consensus 247 ~~~~~~~e~~p~---------------------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~ 303 (336)
+ +-++.+.+|+ +.-|.+.|+....+.+|+++.|.+.+...+ .++...++.+.+..+
T Consensus 366 v-fk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~ 444 (462)
T PRK15034 366 T-FQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYI 444 (462)
T ss_pred H-HHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 3 5677888874 146788899999999999999999988887 456667888888888
Q ss_pred HHHHHHHhhc
Q 019756 304 FTVLFVAKIV 313 (336)
Q Consensus 304 ~~~i~~~~~~ 313 (336)
++.++.+.+.
T Consensus 445 ~~~~~~w~~y 454 (462)
T PRK15034 445 VCVLLTWLVY 454 (462)
T ss_pred HHHHHHHHHh
Confidence 8888877765
No 104
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.33 E-value=2.3e-11 Score=112.61 Aligned_cols=160 Identities=13% Similarity=-0.021 Sum_probs=113.2
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
...+....|.+.+++|.+.. +......++..++.+..|+++||+|||+++..
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~------------------------- 61 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFG------------------------- 61 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHH-------------------------
Confidence 44566778888999998876 55556677788999999999999999986544
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+......+. ..... ..++..++...++.+... +.........+|.+|+++|++++++......+
T Consensus 62 ---~~~~~~~~~-~~~~~-----------~~~~~~l~~~R~l~G~g~-~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~l 125 (368)
T TIGR00903 62 ---SLATFAAAA-GRLLD-----------PFNYEWLLACQLLAALGQ-PFLLNAFAPAASQIREERRDLVISLLSFAMYL 125 (368)
T ss_pred ---HHHHHHHHH-HHHHH-----------hccHHHHHHHHHHHHhHh-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 322222221 11110 011223333333333222 22344456679999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 275 CSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 275 g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
|..+++.+.+.+.+ .+|+..|.+.++++++..++.++++||+++
T Consensus 126 G~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~ 170 (368)
T TIGR00903 126 GIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPF 170 (368)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 99999999998887 899999999888888887777778888643
No 105
>PRK10054 putative transporter; Provisional
Probab=99.33 E-value=3.9e-11 Score=112.23 Aligned_cols=126 Identities=15% Similarity=0.105 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccch
Q 019756 145 IIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDA 224 (336)
Q Consensus 145 ~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (336)
+.........+.+.||.++|+.+.. ++....++...+... . .
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~l~~----------------------------~~~~~~~~~~~~~~~---~-------~ 296 (395)
T PRK10054 255 AMVVSLQYSVGRRLNAANIRPLMTA----------------------------GTLCFVIGLVGFIFS---G-------N 296 (395)
T ss_pred hheeeehhHHHHHHccCCchhHHHH----------------------------HHHHHHHHHHHHHHc---c-------h
Confidence 3344555677889999999988776 655555554444321 0 1
Q ss_pred hHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHH
Q 019756 225 AHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGF 303 (336)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~ 303 (336)
..+...+.... .+.......+....++.|..|++.|+++.+..+ ..++|..++|.+.+.+.| .+....+.+.+++..
T Consensus 297 ~~~~~~~~~~~-~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~ 374 (395)
T PRK10054 297 SLLLWGMSAAV-FTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIV 374 (395)
T ss_pred HHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHH
Confidence 11112222222 222222223455678889999999999988654 677999999999999999 555556666555555
Q ss_pred HHHHHHH
Q 019756 304 FTVLFVA 310 (336)
Q Consensus 304 ~~~i~~~ 310 (336)
+..++..
T Consensus 375 ~~~~~~~ 381 (395)
T PRK10054 375 AAWLLML 381 (395)
T ss_pred HHHHHHH
Confidence 4444433
No 106
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.32 E-value=6.3e-11 Score=110.90 Aligned_cols=159 Identities=19% Similarity=0.132 Sum_probs=113.2
Q ss_pred hHHHHHhHHHHHHHhCCCch--------hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccccccccccccccccc
Q 019756 118 ASAMAYYTSSIFEKAGASGS--------IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYE 189 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~--------~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~ 189 (336)
......+.|.+.++.|.+.. .......+...++.++.|+++||+|||+.+..
T Consensus 30 ~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~-------------------- 89 (408)
T PRK09874 30 FSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLR-------------------- 89 (408)
T ss_pred HHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHH--------------------
Confidence 44556677888888887642 33445566778888999999999999998887
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHH
Q 019756 190 NGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVI 269 (336)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 269 (336)
+.+..++++.+.... .+.+...+.... .+... +..+....++.|.+|+++|+.+.++.+
T Consensus 90 --------~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (408)
T PRK09874 90 --------SALGMGIVMVLMGLA-----------QNIWQFLILRAL-LGLLG-GFVPNANALIATQVPRNKSGWALGTLS 148 (408)
T ss_pred --------HHHHHHHHHHHHHHH-----------hhHHHHHHHHHH-HHHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHH
Confidence 666666665554421 111222222222 22222 334555678889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 270 LICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 270 ~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
....+|..++|.+.+.+.+ .++...+++.+++.++..+...++.||++
T Consensus 149 ~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (408)
T PRK09874 149 TGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENF 197 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 9999999999999998887 78888888888877777766666666653
No 107
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.32 E-value=5.9e-11 Score=111.20 Aligned_cols=156 Identities=12% Similarity=0.071 Sum_probs=110.0
Q ss_pred HHHhHHHHHHHhCCCchh---HHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhh
Q 019756 121 MAYYTSSIFEKAGASGSI---GSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQI 197 (336)
Q Consensus 121 ~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (336)
+.+..+++.++.|.+... ......+......++.|+++||+|||+.+..
T Consensus 30 ~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~---------------------------- 81 (400)
T PRK11646 30 FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVT---------------------------- 81 (400)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHH----------------------------
Confidence 333344456778888763 3334445566667889999999999999988
Q ss_pred hhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHH
Q 019756 198 SACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSW 277 (336)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 277 (336)
+....++++..+... .+.+...+. ..+.+.......+...+++.|.+|+++|+++.|+.+....+|..
T Consensus 82 ~~~~~~~~~~~~~~~-----------~~~~~l~~~-~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ 149 (400)
T PRK11646 82 GMLMRAAGFATMAIA-----------HEPWLLWLS-CILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAV 149 (400)
T ss_pred HHHHHHHHHHHHHHh-----------ccHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 777777777665532 112222232 22233222233455568889999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 278 IVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 278 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
++|.+.+.+.+.++++.|++.+.+.++..++...+.||.
T Consensus 150 ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 150 IGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999998888888888888777776665555566664
No 108
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.32 E-value=7.3e-11 Score=124.73 Aligned_cols=174 Identities=16% Similarity=0.058 Sum_probs=103.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHH-HHHhCCCch----hHHHHHHHHHHHHHHHHHHhhhhcCCc
Q 019756 90 RLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSI-FEKAGASGS----IGSRGIAIIQIPAVITSVLLMDKAGRK 164 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~----~~~~~~~~~~~~g~~~~~~l~dr~grr 164 (336)
.++.+++++..+..++...+.... ......+.|.+ .+..|.+.. +......++.+++.++++++.||+++|
T Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~ 299 (1146)
T PRK08633 224 NLKLLRSDRVLWLAIIGLSYFWFI----SQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL 299 (1146)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHH----HHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc
Confidence 345566665555444333332221 22233334444 444666544 455666777888999999999999998
Q ss_pred eeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCc
Q 019756 165 PLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGL 244 (336)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (336)
+.+.+ +.++++++.+.+... ...+..++...+++ +.....
T Consensus 300 ~~~~~----------------------------~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~g-~~~~~~ 339 (1146)
T PRK08633 300 GLVPL----------------------------GALGLALSLFLLPTA-----------PSLASVLVLFFLFG-FSAGLF 339 (1146)
T ss_pred cchhH----------------------------HHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHH-HHHHHh
Confidence 87776 666565555554422 11122222222222 222223
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh--hcchhhhHHHHHHHHHHH
Q 019756 245 AGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQW--SSAGTFFIFSGIGFFTVL 307 (336)
Q Consensus 245 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~i 307 (336)
.+...+++.+..|++.||+++|+.+.+..+|..+++.+.+.+... ++...+.+.+.+.++..+
T Consensus 340 ~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 404 (1146)
T PRK08633 340 IVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTL 404 (1146)
T ss_pred hHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 345578889999999999999999999999998888777666542 333344444444443333
No 109
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.31 E-value=2.5e-11 Score=116.00 Aligned_cols=177 Identities=11% Similarity=-0.014 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccc
Q 019756 104 IIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMF 180 (336)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~ 180 (336)
+...++.+...+..-..+....|.+.+++|.+.. +......++..++.++.|+++||+|||+++..
T Consensus 31 ~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~----------- 99 (467)
T PRK09556 31 YLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPF----------- 99 (467)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHH-----------
Confidence 3333344444444445566667888999998776 55666777788999999999999999999887
Q ss_pred cccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccc
Q 019756 181 DFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINV 260 (336)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 260 (336)
+.+..++..+.++...... ..+...++......+.+.....+....+++|++|+++
T Consensus 100 -----------------~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 155 (467)
T PRK09556 100 -----------------LLILSAICMLGFGASLGSG-------SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK 155 (467)
T ss_pred -----------------HHHHHHHHHHHHHHHHhcc-------cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc
Confidence 6666666666555432111 1123333333334444433345666789999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHh----hcchhhhHHHHHHHHHHHHHHhhccC
Q 019756 261 KASAGSLVILICWSCSWIVTYTFNFMMQW----SSAGTFFIFSGIGFFTVLFVAKIVPE 315 (336)
Q Consensus 261 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~i~~~~~~~e 315 (336)
|++++|+......+|..+++.+...+.+. +|...|.+.+++.++..++.+++.++
T Consensus 156 rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~ 214 (467)
T PRK09556 156 RGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSD 214 (467)
T ss_pred eeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999998887665552 36666777777766665555555443
No 110
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.31 E-value=4.4e-11 Score=115.05 Aligned_cols=159 Identities=14% Similarity=0.138 Sum_probs=113.3
Q ss_pred hhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 117 GASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
.........|.+.+++|.+.. .......++..++.+..|+++||+|||+.+..
T Consensus 35 ~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~------------------------ 90 (496)
T PRK03893 35 DFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI------------------------ 90 (496)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH------------------------
Confidence 455666677888889998875 55566777888999999999999999998887
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+.+..+++++..... . +...+.....+.+....+..+....++.|.+|++.|+.+.++......
T Consensus 91 ----~~~~~~~~~~~~~~~-----------~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 154 (496)
T PRK03893 91 ----SIVLFSVGTLACGFA-----------P-GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFS 154 (496)
T ss_pred ----HHHHHHHHHHHHHHH-----------h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 777777766666542 1 122223333334444444456667889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
+|..++|.+.+.+.+ .+|++.+.+..... +..++.....||+
T Consensus 155 ~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~-~~~~~~~~~~p~~ 197 (496)
T PRK03893 155 IGAVVAAQVYSLVVPVWGWRALFFIGILPI-IFALWLRKNLPEA 197 (496)
T ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHH-HHHHHHHHhCCCc
Confidence 999999999998887 77777776543332 2223233445654
No 111
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.31 E-value=1.9e-10 Score=107.81 Aligned_cols=63 Identities=11% Similarity=0.029 Sum_probs=48.2
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-----cchhhhHHHHHHHHHHH
Q 019756 245 AGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQWS-----SAGTFFIFSGIGFFTVL 307 (336)
Q Consensus 245 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~i 307 (336)
.+...+++.|..|++.||++.|+.+....+|..++|.+.+.+.+.+ ...++...+.+++++.+
T Consensus 315 ~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 315 EPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLL 382 (400)
T ss_pred HccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 3455688899999999999999999999999999999999999832 23344444444444444
No 112
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.31 E-value=6.8e-11 Score=108.96 Aligned_cols=162 Identities=17% Similarity=0.116 Sum_probs=110.7
Q ss_pred hhhhHHHHHhHHH-HHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccc
Q 019756 115 FGGASAMAYYTSS-IFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYEN 190 (336)
Q Consensus 115 ~~~~~~~~~~~~~-~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (336)
+........+.|. +.++.|.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~--------------------- 72 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTL--------------------- 72 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHH---------------------
Confidence 3345667777784 7788898876 66667778889999999999999999999888
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHH
Q 019756 191 GYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVIL 270 (336)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 270 (336)
+.+...++...+.... ...+...+. ..+.+... +..+....+++|.+|+++|+++.++...
T Consensus 73 -------~~~~~~i~~~~~~~~~----------~~~~~~~~~-~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 133 (366)
T TIGR00886 73 -------SLLLLAIPCLWAGLAV----------QSYSVLLLL-RLFIGIAG-GSFASCMPWISFFFPKKIQGTALGLAAG 133 (366)
T ss_pred -------HHHHHHHHHHHHHHHh----------hhHHHHHHH-HHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHHHH
Confidence 7777777776665431 012222233 33333332 2334456889999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHH-----------hhcchhh-hHHHHHHHHHHHHHHhhccCC
Q 019756 271 ICWSCSWIVTYTFNFMMQ-----------WSSAGTF-FIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 271 ~~~~g~~~~~~~~~~l~~-----------~~~~~~~-~~~~~~~~~~~i~~~~~~~et 316 (336)
...+|..+++.+.+.+.+ .+|++.+ ...+.+..+..++...+.+|+
T Consensus 134 ~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 134 WGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence 888888888777766554 1577777 444554444444444444543
No 113
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.31 E-value=5e-11 Score=109.36 Aligned_cols=158 Identities=11% Similarity=-0.025 Sum_probs=110.6
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
........|.+..+.+.+.. +......++..++.+..|+++||+|||+.+..
T Consensus 15 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~------------------------- 69 (365)
T TIGR00900 15 TAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIG------------------------- 69 (365)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHH-------------------------
Confidence 33444555666667776655 56666777888999999999999999999888
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+..+..++...........+ .+.+...+. ..+.+.......+...+++.|++|+++|+++.++.+....+
T Consensus 70 ---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (365)
T TIGR00900 70 ---ADLIRAVLVAVLPFVALLGG------LNIWQVYVL-AGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSL 139 (365)
T ss_pred ---HHHHHHHHHHHHHHHHHcCC------CcHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHH
Confidence 66666666655554321111 112222222 33333333334566678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHH
Q 019756 275 CSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 275 g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~ 310 (336)
|..++|.+.+.+.+ .+|+..+++.++..+++.+...
T Consensus 140 g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 140 FYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999887 7888888777766665554433
No 114
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.30 E-value=2.8e-11 Score=112.16 Aligned_cols=158 Identities=14% Similarity=0.140 Sum_probs=117.4
Q ss_pred HHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhh
Q 019756 120 AMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQ 196 (336)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (336)
......|.+.++.|.+.. .......++..++.+..|+++||+|||+.+..
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~--------------------------- 61 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILG--------------------------- 61 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHH---------------------------
Confidence 444567778888888765 45566777788999999999999999999888
Q ss_pred hhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHH
Q 019756 197 ISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCS 276 (336)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 276 (336)
+..+.+++....... ...+.. .....+.+.......+....++.|.+|++.|+++.++.+....+|.
T Consensus 62 -~~~~~~i~~~~~~~~-----------~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 128 (377)
T PRK11102 62 -GTLVFALAAVACALA-----------QTIDQL-IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAP 128 (377)
T ss_pred -HHHHHHHHHHHHHHH-----------ccHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 777777776666532 111222 2222333333333345567889999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 277 WIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 277 ~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
.++|.+.+.+.+ .+|++.+++.+.+.++..+...++.||++
T Consensus 129 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 129 LLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999999998888 78888888888887777666666677753
No 115
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.29 E-value=1.2e-10 Score=110.12 Aligned_cols=170 Identities=14% Similarity=0.059 Sum_probs=110.8
Q ss_pred hhhHHHHHhHHHHHHHhC---CCch------hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccc
Q 019756 116 GGASAMAYYTSSIFEKAG---ASGS------IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQR 186 (336)
Q Consensus 116 ~~~~~~~~~~~~~~~~~g---~~~~------~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~ 186 (336)
.....+.+..|.+.++.+ .+.. .......++..+|.++.|+++||+|||+.+..
T Consensus 36 ~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~----------------- 98 (432)
T PRK10406 36 FDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI----------------- 98 (432)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH-----------------
Confidence 345556677777777764 2222 12233344556999999999999999999988
Q ss_pred cccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhH
Q 019756 187 GYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGS 266 (336)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 266 (336)
+....+++.+.+++....... .......++....+.+....+..+...++++|.+|+++|+.+.+
T Consensus 99 -----------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~ 163 (432)
T PRK10406 99 -----------SVCMMCFGSLVIACLPGYETI----GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYAS 163 (432)
T ss_pred -----------HHHHHHHHHHHHhhcCCchhH----HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHH
Confidence 888888877777643111000 01112234444555555555567778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---------HhhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 267 LVILICWSCSWIVTYTFNFMM---------QWSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 267 ~~~~~~~~g~~~~~~~~~~l~---------~~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
+.......|..+++.+...+. .++|+..|.+.++..++... .....||++.
T Consensus 164 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~ 223 (432)
T PRK10406 164 FQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQ 223 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCch
Confidence 888777777777776654432 36888889877766655433 3344566543
No 116
>PRK11043 putative transporter; Provisional
Probab=99.29 E-value=1.3e-10 Score=108.75 Aligned_cols=156 Identities=14% Similarity=0.077 Sum_probs=108.0
Q ss_pred HHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 119 SAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 119 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
.......|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 23 ~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~-------------------------- 76 (401)
T PRK11043 23 DMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLA-------------------------- 76 (401)
T ss_pred HHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHH--------------------------
Confidence 3344445566788888776 55666777788999999999999999999887
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSC 275 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 275 (336)
+.....+++...... .+.+...+.. .+.+.......+....++.|.+|++.++...+..+....++
T Consensus 77 --~~~~~~~~~~~~~~~-----------~~~~~l~~~~-~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (401)
T PRK11043 77 --GLSLFALGSLGMLWV-----------ESAAQLLVLR-FVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALS 142 (401)
T ss_pred --HHHHHHHHHHHHHHh-----------cCHHHHHHHH-HHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 666666666555432 1112222222 22222221222344577899999999999999998888999
Q ss_pred HHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhcc
Q 019756 276 SWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 276 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
..++|.+.+.+.+ .+|+..+.+.+.+.++..+......+
T Consensus 143 ~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 143 PALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKP 182 (401)
T ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999998888 78888888888777776655444433
No 117
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.28 E-value=2.5e-11 Score=111.75 Aligned_cols=157 Identities=13% Similarity=0.101 Sum_probs=111.2
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
.+....+.|.+.+++|.+.. +......++..++.+..|+++||+|||+.+..
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~------------------------- 73 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAML------------------------- 73 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHH-------------------------
Confidence 44566778889999998876 66677788889999999999999999999988
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+..+.+++....+.. .+.+...+... +.+.......+.....+.|.+| ++|+.+.++......+
T Consensus 74 ---~~~~~~~~~~~~~~~-----------~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 137 (377)
T TIGR00890 74 ---GGILYGLGFTFYAIA-----------DSLAALYLTYG-LASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGL 137 (377)
T ss_pred ---hHHHHHHHHHHHHHH-----------HHHHHHHHHHH-HHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcch
Confidence 877777777666543 11222222222 2222222222334566778887 5699999999999888
Q ss_pred HHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccC
Q 019756 275 CSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPE 315 (336)
Q Consensus 275 g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~e 315 (336)
|..+++.+.+.+.+ .+|++.+.+.+++.++..+..+.+.+|
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 138 GSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred hHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence 88776655555555 778888988888887777666665544
No 118
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.28 E-value=2.2e-10 Score=110.62 Aligned_cols=144 Identities=15% Similarity=0.017 Sum_probs=101.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
+......++.+++.+++++++||+|||+.+.. +.++..++.++.+... +
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~----------------------------~~~~~~v~~~~~~~~~---~ 108 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGM----------------------------ELIIMIIATVASGLSP---G 108 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH----------------------------HHHHHHHHHHHHHHcc---C
Confidence 56677778899999999999999999999888 7777777766555321 1
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH---------
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ--------- 288 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--------- 288 (336)
.. ...+...++....+.+....+..+...++++|.+|++.|++++++.+....+|..+++.+...+..
T Consensus 109 ~~---~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~ 185 (502)
T TIGR00887 109 SS---PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAA 185 (502)
T ss_pred cc---cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 00 011123334444444454445567778999999999999999999999999999888887654431
Q ss_pred ---------------hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 289 ---------------WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 289 ---------------~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
++|+..+.+.++.+++. .+..+++||+
T Consensus 186 ~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpES 227 (502)
T TIGR00887 186 ADEASCTGSCVPAVDYMWRILIGFGAVPALLA-LYFRLTIPET 227 (502)
T ss_pred cccccccccccchhcccHHHHHHHHHHHHHHH-HHHHHhCCCC
Confidence 35777776555544443 3345677997
No 119
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.28 E-value=3.3e-10 Score=108.98 Aligned_cols=234 Identities=14% Similarity=0.115 Sum_probs=141.6
Q ss_pred chhhHHHHHhhCccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 3 TFGCSLAYFFGNVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 3 ~~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
.+|+.+++++...+|=.+.|++.++.-++.+......+..++ .+...+| +
T Consensus 153 ~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~---~~~~~~e--~------------------------- 202 (524)
T PF05977_consen 153 IIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP---PSSLPRE--R------------------------- 202 (524)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc---ccccchh--h-------------------------
Confidence 468888988888888899999977654444443333332110 0000000 0
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHH-HhCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFE-KAGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
-.++-+..++-..+++..+..++...+..+ . .......+|.+.+ .+|.+.. +.....+++.++|.++.+++.
T Consensus 203 ~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l---~-~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~ 278 (524)
T PF05977_consen 203 FFSALREGLRYVRSSPPLRSVLLRSFLFNL---F-ASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLR 278 (524)
T ss_pred hhhhHHHHHHHHhcchHHHHHHHHHHHHHH---h-hhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 000111122223334444433332222211 1 2223334566554 3565554 677788889999999999999
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
+|+++++++.. +.+..+++++.+++. .+.+...+.+. +.+
T Consensus 279 ~~~~~~~lv~~----------------------------~~~~~a~~~~~lal~-----------~~~~~~~~~l~-l~G 318 (524)
T PF05977_consen 279 RRLSSRRLVLL----------------------------ASLLFALALLLLALS-----------PSFWLALIALF-LAG 318 (524)
T ss_pred cccCcchhhHH----------------------------HHHHHHHHHHHHhcc-----------hHHHHHHHHHH-HHH
Confidence 99998888777 666666666665532 22233333333 333
Q ss_pred HhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHH
Q 019756 239 FNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~ 310 (336)
...........+...+..|++.||+++|+..+....+..++..+.|.+.+ .+....+.+.++..+++.++..
T Consensus 319 ~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 319 AAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 33333344556888899999999999999999999999999999999998 6777777766665555555443
No 120
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.27 E-value=7.9e-11 Score=112.26 Aligned_cols=174 Identities=12% Similarity=0.096 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccccc
Q 019756 101 NSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLF 177 (336)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~ 177 (336)
|..+...++.....+.....+..+.|.+.++.|.+.+ +......+...++.++.|+++||+|||+.++.
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~-------- 89 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIA-------- 89 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHh--------
Confidence 3333333333333333334566778888899998766 44444445567788899999999999998888
Q ss_pred ccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCC
Q 019756 178 KMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFP 257 (336)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 257 (336)
+.+...++++..+.. ...+...+....+.+.......+....++.|.+|
T Consensus 90 --------------------~~~~~~~~~~~~~~~-----------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~ 138 (455)
T TIGR00892 90 --------------------GGLLASLGMILASFS-----------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY 138 (455)
T ss_pred --------------------hHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH
Confidence 776666666665432 1111121222122222211122344567788886
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhcc
Q 019756 258 INVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 258 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
+.|+++.|+.+....+|..++|.+.+.+.+ .+|+++|++.+++.+++.+..++..+
T Consensus 139 -~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 139 -RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred -hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 689999999999999999999999988877 88999999988887766554444433
No 121
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.27 E-value=3.9e-11 Score=114.57 Aligned_cols=147 Identities=13% Similarity=0.015 Sum_probs=109.3
Q ss_pred hCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHH
Q 019756 132 AGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFL 208 (336)
Q Consensus 132 ~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (336)
.+.+.. .......++..++.+..|+++||+|||+.+.. +.++..++.++
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~----------------------------~~~~~~~~~~~ 122 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGI----------------------------GMFLSSVISIV 122 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHH----------------------------HHHHHHHHHHH
Confidence 444443 56667778889999999999999999998887 66666555555
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 209 IGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
..... ......++...++.+.......+....+++|.+|++.|+++.++.+....+|..+++.+.+.+.+
T Consensus 123 ~~~~~----------~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~ 192 (465)
T TIGR00894 123 IPWAA----------GGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCE 192 (465)
T ss_pred HHHHH----------HcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43221 11122334444555555556667778999999999999999999999999999999999998887
Q ss_pred -h-hcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 289 -W-SSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 289 -~-~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
. +|+..|.+.+++.++..++.+.+.+|.
T Consensus 193 ~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 193 SWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred ccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 3 899999998888777766555555543
No 122
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.27 E-value=2.2e-10 Score=107.11 Aligned_cols=156 Identities=11% Similarity=-0.046 Sum_probs=104.7
Q ss_pred hHHHHHhHHH-HHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 118 ASAMAYYTSS-IFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 118 ~~~~~~~~~~-~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
.......+|. +.++.|.+.. +......+...++.+..|+++||+|||+++..
T Consensus 31 ~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~------------------------ 86 (399)
T PRK05122 31 IGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVF------------------------ 86 (399)
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHH------------------------
Confidence 4444455555 4567787766 56666777888999999999999999999988
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+.++.+++...........+.. ......++....+.+.......+....++.|.+|+++|+++.++......
T Consensus 87 ----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 158 (399)
T PRK05122 87 ----GLCGCALSGLLYLLAGLLAAWP----VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATY 158 (399)
T ss_pred ----HHHHHHHHHHHHHHhhhhhccc----hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhh
Confidence 7766666555544332111100 11222333333334444334455566788999999999999999988888
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHH
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFT 305 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~ 305 (336)
.|..+++.+.+.+.+ .+|...+.+.+.+.++.
T Consensus 159 ~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 159 GALAIGAPLGVLLYHWGGLAGLGLLIMLLALLG 191 (399)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 999999999988877 67766666555544433
No 123
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.27 E-value=1.4e-11 Score=112.42 Aligned_cols=210 Identities=20% Similarity=0.212 Sum_probs=119.2
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHHHH-HhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQLIG-LFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~-~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+.+..|||+.|++.++..++..++ .++++++|+....+.+.++ + .
T Consensus 136 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~-----------------~---------~ 189 (352)
T PF07690_consen 136 LGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKES-----------------E---------S 189 (352)
T ss_dssp HHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTT-----------------T----------
T ss_pred cccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccccccccc-----------------c---------c
Confidence 45666666667779999999988887777654 3555554421000000000 0 0
Q ss_pred hhchhhH-HHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHH-HHHhCCC-ch---hHHHHHHHHHHHHHHHHHH
Q 019756 83 SQKHSEA-RLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSI-FEKAGAS-GS---IGSRGIAIIQIPAVITSVL 156 (336)
Q Consensus 83 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~-~~---~~~~~~~~~~~~g~~~~~~ 156 (336)
+++++.. .+++.++++..+..+...... .........+.|.+ .+..|.+ .. .......+..+++.++.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (352)
T PF07690_consen 190 KKPKPLKPGFKSLFKNPVLWILLIAFFLF----FFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGR 265 (352)
T ss_dssp -HHHCCCH-CTHHHHHHCCHHHHHHHHHH----HHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccchhhhhhhhhhHH----HHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001111 244555555444222222222 11244466677765 6667777 33 3456667777888999999
Q ss_pred hhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHH
Q 019756 157 LMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGC 236 (336)
Q Consensus 157 l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (336)
++||+++|+.... ......+....+...... .............
T Consensus 266 l~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 309 (352)
T PF07690_consen 266 LSDRFGRRRRLLI----------------------------AILLLILGALGLLLLPFS--------SSPVWLIIALFLI 309 (352)
T ss_dssp HHHHTTCHHHHHH----------------------------HHHHHHHHHHHHCCSHHH--------CHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHH----------------------------HHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHH
Confidence 9999999877665 444444444333322111 0112222222222
Q ss_pred HHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHH
Q 019756 237 SAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVT 280 (336)
Q Consensus 237 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 280 (336)
+. ......+....++.|..|++.|+++.|+.+....+|+.++|
T Consensus 310 g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 310 GF-GFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HH-HHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 22 33333567789999999999999999999999999999887
No 124
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.26 E-value=2.1e-10 Score=121.30 Aligned_cols=242 Identities=10% Similarity=-0.000 Sum_probs=137.7
Q ss_pred chhhHHHHHhhCccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 3 TFGCSLAYFFGNVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 3 ~~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
.+|+++++++....+||+.|++.++..++.++..+++|+++.- +.+.+. +. . .
T Consensus 158 ~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----------~~-~---~---------- 210 (1140)
T PRK06814 158 LLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA---APDLKI----------DR-N---I---------- 210 (1140)
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC---CCCCee----------cc-c---h----------
Confidence 4677777777778899999966666666666677778776420 000000 00 0 0
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
.++....++.+.+++..+...+......+. ...+..+.|.+.++ .|.+.. ......+++.++|.+..++++
T Consensus 211 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~ 285 (1140)
T PRK06814 211 -IRSTITLLKYAKADKRIWLAILGISWFWLV----GAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLS 285 (1140)
T ss_pred -HHHHHHHHHHHhcCchHHHHHHHHHHHHHH----HHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000112355555666555554443333222 22333455655544 566654 566777788899999999999
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhh--hccc-------cccchhHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYL--KEVK-------NMNDAAHILV 229 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~ 229 (336)
|+.++++.+.. +.++.+++.+.+.+.... .... .......+..
T Consensus 286 ~~~~~~~~~~~----------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (1140)
T PRK06814 286 EGRITLLYVPI----------------------------GALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRI 337 (1140)
T ss_pred CCceeeeeehH----------------------------HHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHH
Confidence 98887776655 444444433333321000 0000 0000112223
Q ss_pred HHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHHHH
Q 019756 230 LVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFT 305 (336)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~ 305 (336)
.+...+++.+ .....+...+++.+..|++.||+++|+.+....+|..+++.+.+.+.+ .+....+++.+.+.++.
T Consensus 338 ~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 414 (1140)
T PRK06814 338 LIDLFGLAAA-GGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIV 414 (1140)
T ss_pred HHHHHHHHHH-HHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 3333333332 223334467899999999999999999999999999999999988875 33344444444433333
No 125
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.25 E-value=2.2e-10 Score=107.04 Aligned_cols=152 Identities=9% Similarity=0.060 Sum_probs=107.4
Q ss_pred HHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhh
Q 019756 122 AYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQIS 198 (336)
Q Consensus 122 ~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (336)
....+...++.+.+.. +......+...+..++.|+++||+|||+++.. +
T Consensus 23 ~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~----------------------------~ 74 (393)
T PRK11195 23 LFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFI----------------------------A 74 (393)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHH----------------------------H
Confidence 3334445677776654 55667777888999999999999999999998 7
Q ss_pred hhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHH
Q 019756 199 ACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWI 278 (336)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 278 (336)
..+.+++++.+... .+ . +....+.+.......|...+++.|++|+++|+++.|+......++..+
T Consensus 75 ~~~~~~~~~~~~~~-----------~~-~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~ 139 (393)
T PRK11195 75 NGIKLLGCLLMLFG-----------IH-P---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILL 139 (393)
T ss_pred HHHHHHHHHHHHHH-----------HH-H---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 77766665554322 01 1 222233444455566788899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 279 VTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 279 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
+|.+.+.+.+..+...+.+.+.+.+++ .+....+||++
T Consensus 140 Gp~lgG~l~~~~~~~~~~i~~~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 140 GTVLGGALADPHAEAALAVCALIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 999999998865555555554443333 33345567653
No 126
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.24 E-value=3.1e-10 Score=108.04 Aligned_cols=151 Identities=15% Similarity=0.043 Sum_probs=102.4
Q ss_pred hHHHHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhc-CCceeeeeecccccccccccccccccccccc
Q 019756 118 ASAMAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLLMDKA-GRKPLLMVITTSRTLFKMFDFVDQRGYENGY 192 (336)
Q Consensus 118 ~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~-grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (336)
++.+..++|.++ ++.|.+.. ...........++.+++|+++||+ |||+.+.+
T Consensus 25 ~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ili----------------------- 81 (493)
T PRK15462 25 FYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVML----------------------- 81 (493)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHH-----------------------
Confidence 444555566554 44677765 444555566778899999999999 99999888
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCcc--chhhhhHHHHH
Q 019756 193 QYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPIN--VKASAGSLVIL 270 (336)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~ 270 (336)
+.+..+++.++++.. + .......+.......+ .....+...++++|++|++ .|+++.++.+.
T Consensus 82 -----G~il~~lg~lll~~~----~------~~~~~~~l~l~li~iG-~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~ 145 (493)
T PRK15462 82 -----GALLMAIGHVVLGAS----E------IHPSFLYLSLAIIVCG-YGLFKSNVSCLLGELYEPTDPRRDGGFSLMYA 145 (493)
T ss_pred -----HHHHHHHHHHHHHHh----h------cchhHHHHHHHHHHHh-cccccccHHHHHHHHCCCCCccccceehHHHH
Confidence 777777776655421 0 0001111221111111 2223355568899999986 79999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHH
Q 019756 271 ICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVL 307 (336)
Q Consensus 271 ~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i 307 (336)
..++|+.++|.+.+.+.+ .+|+..|.+.++..+++.+
T Consensus 146 ~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li 183 (493)
T PRK15462 146 AGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLV 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHH
Confidence 999999999999999987 7888888876654444443
No 127
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.24 E-value=2.3e-10 Score=103.94 Aligned_cols=234 Identities=18% Similarity=0.255 Sum_probs=151.3
Q ss_pred HHHHHhhCccc---hHHHHHHhHHHHHH-HHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 7 SLAYFFGNVIP---WRILALIGVIPCVL-QLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 7 ~l~~~l~~~~g---Wr~~f~i~~i~~~i-~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
++++.+....+ ||..-.+-.++.++ .+..++.+.|.|... .
T Consensus 157 ~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r-----------------------------------~ 201 (417)
T COG2223 157 LVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHR-----------------------------------A 201 (417)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhh-----------------------------------c
Confidence 33444445557 99998887776665 455566777776420 0
Q ss_pred hhchhh-HHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHh
Q 019756 83 SQKHSE-ARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLL 157 (336)
Q Consensus 83 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l 157 (336)
+.++.. ..++..+++++.|.+.+ .++..+++...+..++|.++++ +|.+.. .........+.+....+|++
T Consensus 202 ~~~~~~~~~~~~v~~~~~~W~lsl----lY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~L 277 (417)
T COG2223 202 SVKPQLPAQLKAVFSNKDTWLLSL----LYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWL 277 (417)
T ss_pred cccccchhHHHHHhcCcchHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchh
Confidence 000111 34566666766666554 3444555667777777776554 677765 34444555566777899999
Q ss_pred hhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHH
Q 019756 158 MDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCS 237 (336)
Q Consensus 158 ~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
+||+|.+++..+ ....++++..+.......... ..........+....
T Consensus 278 sDR~Gg~rv~~~----------------------------~f~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~l~l~ 325 (417)
T COG2223 278 SDRIGGRRVTLA----------------------------VFVGMALAAALLSLFLTGFGH----GGSFVVFVAVFLALF 325 (417)
T ss_pred hhhccchhHHHH----------------------------HHHHHHHHHHHHHcccccccc----CcchHHHHHHHHHHH
Confidence 999999988877 666666666655533211111 122233333344444
Q ss_pred HHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHHHHHHhhc
Q 019756 238 AFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTVLFVAKIV 313 (336)
Q Consensus 238 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~i~~~~~~ 313 (336)
.+.+.|...+ +.++...+|. .-|...|+...++.+|++..|...+...+ ..+...|+.+..+.+++.+..+...
T Consensus 326 ~~~G~GnGsv-fk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 326 VFAGLGNGSV-FKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHhccCcchh-eeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555554444 6778888876 56888999999999999999999999988 4467788888888888887666554
No 128
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.23 E-value=4.2e-10 Score=108.31 Aligned_cols=167 Identities=16% Similarity=0.121 Sum_probs=110.1
Q ss_pred hHHHHHhHHHHHHHhCCCc--h--hH-----HHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccc
Q 019756 118 ASAMAYYTSSIFEKAGASG--S--IG-----SRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGY 188 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~--~--~~-----~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~ 188 (336)
...+.+..|.+.+++..+. . .. .....++..+|.++.|+++||+|||+++..
T Consensus 32 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~------------------- 92 (490)
T PRK10642 32 FGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAI------------------- 92 (490)
T ss_pred HHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHH-------------------
Confidence 4455566676666654222 1 11 233446678899999999999999999998
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHH
Q 019756 189 ENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLV 268 (336)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 268 (336)
+.++++++.+++++...+.... ......++...++.+....+..+...++++|.+|+++|+...++.
T Consensus 93 ---------~~~l~~i~~~~~a~~~~~~~~g----~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~ 159 (490)
T PRK10642 93 ---------TIVIMSISTFCIGLIPSYATIG----IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWL 159 (490)
T ss_pred ---------HHHHHHHHHHHHHhcccHHHHH----HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHH
Confidence 8888888888877542111000 000112344445555555566677789999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHH---------HhhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 269 ILICWSCSWIVTYTFNFMM---------QWSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 269 ~~~~~~g~~~~~~~~~~l~---------~~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
.....+|..+++.+...+. +++|++.|++.+.+.+++. +....+||+.
T Consensus 160 ~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~-~~~~~~~esp 216 (490)
T PRK10642 160 DFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGL-YLRHALEETP 216 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHH-HHHHcCCCCh
Confidence 8877777777776554332 2688889888665555433 3345667763
No 129
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.23 E-value=4.3e-10 Score=101.69 Aligned_cols=140 Identities=6% Similarity=-0.042 Sum_probs=88.0
Q ss_pred hhHHHHHhHHHHHHH---hCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccc
Q 019756 117 GASAMAYYTSSIFEK---AGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYEN 190 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (336)
.-.....|.+.++++ .|.+.. ........+.++|.++.++++||+|+|+.+.+
T Consensus 155 ~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~--------------------- 213 (310)
T TIGR01272 155 AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAF--------------------- 213 (310)
T ss_pred HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH---------------------
Confidence 344555666666654 366654 55666777889999999999999999887766
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHH
Q 019756 191 GYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVIL 270 (336)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 270 (336)
+..+..++..+.... + .......... .+++.....|...+...+.+|++ .+++.++. .
T Consensus 214 -------~~~l~~~~~~l~~~~---~---------~~~~~~~~~l-~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~ 271 (310)
T TIGR01272 214 -------NAFLAVLLSIGAALT---H---------GYVAMWFVLA-LGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-C 271 (310)
T ss_pred -------HHHHHHHHHHHHHHc---C---------CHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-H
Confidence 555444444322211 0 0111122222 22333334566667777877764 45666664 6
Q ss_pred HHHHHHHHHHHHHHHHHH-hhcchhhhHHH
Q 019756 271 ICWSCSWIVTYTFNFMMQ-WSSAGTFFIFS 299 (336)
Q Consensus 271 ~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~ 299 (336)
.+.+|+.+.|.+.|.+.| .+....+++..
T Consensus 272 ~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 272 LAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 788999999999999988 66666665433
No 130
>PRK15075 citrate-proton symporter; Provisional
Probab=99.23 E-value=2e-10 Score=108.86 Aligned_cols=164 Identities=18% Similarity=0.087 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch-hHHHH---H-----HHHHHHHHHHHHHhhhhcCCceeeeeecccc
Q 019756 104 IIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS-IGSRG---I-----AIIQIPAVITSVLLMDKAGRKPLLMVITTSR 174 (336)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~---~-----~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~ 174 (336)
.....+..+..+.....+....|.+.++++.+.. ..... . .+...++.++.|+++||+|||+.++.
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~----- 91 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV----- 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH-----
Confidence 3334444555555577788899999999887654 11111 1 12224678899999999999999988
Q ss_pred cccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcc
Q 019756 175 TLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSE 254 (336)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 254 (336)
+..+..++..++++....... ..... ..++...++.+....+..+....+++|
T Consensus 92 -----------------------~~~~~~~~~~l~~~~~~~~~~---~~~~~-~~l~~~R~l~G~~~g~~~~~~~~~~~e 144 (434)
T PRK15075 92 -----------------------TLSIMASGTLLIAFVPGYATI---GLAAP-LLVLLGRLLQGFSAGVELGGVSVYLAE 144 (434)
T ss_pred -----------------------HHHHHHHHHHHHHhCCcHHHH---HHHHH-HHHHHHHHHhhccccccHHHHHHHHHh
Confidence 888777777777643111000 00001 112333333343333334555689999
Q ss_pred cCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH---------HhhcchhhhHHH
Q 019756 255 IFPINVKASAGSLVILICWSCSWIVTYTFNFMM---------QWSSAGTFFIFS 299 (336)
Q Consensus 255 ~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~---------~~~~~~~~~~~~ 299 (336)
.+|+++|++++++.....++|..+++.+.+.+. +.+|+.+|++..
T Consensus 145 ~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 145 IATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred hCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 999999999999999888888877777766542 267777877643
No 131
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.23 E-value=6.1e-11 Score=112.62 Aligned_cols=159 Identities=14% Similarity=-0.003 Sum_probs=107.5
Q ss_pred HHHHhHHHHHHHhCCC--------ch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccc
Q 019756 120 AMAYYTSSIFEKAGAS--------GS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGY 188 (336)
Q Consensus 120 ~~~~~~~~~~~~~g~~--------~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~ 188 (336)
......+.+..+.+.+ .. +......++..++.++.|+++||+|||+.++.
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~------------------- 106 (481)
T TIGR00879 46 VIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI------------------- 106 (481)
T ss_pred hhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH-------------------
Confidence 3444455555555554 22 66777788889999999999999999999888
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHH
Q 019756 189 ENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLV 268 (336)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 268 (336)
+.++..++..+...... ..+...++....+.+.......+....++.|.+|+++|+.++++.
T Consensus 107 ---------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 168 (481)
T TIGR00879 107 ---------IALLFVIGAILMGLAAF---------ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLY 168 (481)
T ss_pred ---------HHHHHHHHHHHHHHhcc---------ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHH
Confidence 77777666666543210 111112233333333333344566678999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---HHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 269 ILICWSCSWIVTYTF---NFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 269 ~~~~~~g~~~~~~~~---~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
+....+|..+++.+. ....+ .+|++.|.+.+...++.. +..+++||+
T Consensus 169 ~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~ 219 (481)
T TIGR00879 169 QLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPES 219 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCC
Confidence 999999999999988 43333 677788887555444443 345556775
No 132
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.22 E-value=2.3e-09 Score=100.94 Aligned_cols=230 Identities=11% Similarity=0.032 Sum_probs=116.7
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHHHHH-HhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQLIG-LFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~~~~-~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|++++..+.+.+|||+.|++.++..++..+. ++.+||+++. +++. . +
T Consensus 155 ~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~---~~~~------------~--~-------------- 203 (413)
T PRK15403 155 IGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKR---GAVP------------F--S-------------- 203 (413)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccc---cCCC------------C--C--------------
Confidence 46666666666779999999988776666544 5668987530 0000 0 0
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHh-CCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKA-GASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
.+...+.+++.++++..+...+...+... .......+.|.+.++. |.+.. +.......+.+++..+.+.+.
T Consensus 204 -~~~~~~~~~~ll~~~~~~~~~l~~~~~~~----~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~ 278 (413)
T PRK15403 204 -AKSVLRDFRNVFRNRLFLTGAATLSLSYI----PMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFV 278 (413)
T ss_pred -hHHHHHHHHHHHcCHHHHHHHHHHHHHHH----HHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00011234566666655554443222222 2334455667666654 77765 333344556666666666655
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
++..+++.... ......++..++........ ...+...+....+..
T Consensus 279 ~~~~~~~~~~~----------------------------~~~~~~ig~~l~~~~~~~~~------~~~~~~~~~~~l~~~ 324 (413)
T PRK15403 279 KDPTEPRFIWR----------------------------AVPIQLVGLALLIVGNLLWP------HVWLWSVLGTSLYAF 324 (413)
T ss_pred ccCCchhHHHH----------------------------HHHHHHHHHHHHHHHHHHcc------ccHHHHHHHHHHHHH
Confidence 44333333222 22222222222221111100 111111222222222
Q ss_pred HhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHH
Q 019756 239 FNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFT 305 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 305 (336)
+.+.. .+......-+ -....+|++.|+.+.....+...++...+++.+.+....+...+++..+.
T Consensus 325 G~~~~-~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 325 GIGLI-FPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHH-hHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 22221 1222211111 12224799999999999999999999999887766666666665554443
No 133
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.22 E-value=1.2e-09 Score=102.00 Aligned_cols=208 Identities=13% Similarity=0.004 Sum_probs=109.2
Q ss_pred hhhHHHHHhhCccchHHHHHHhHHHHHHH-HHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 019756 4 FGCSLAYFFGNVIPWRILALIGVIPCVLQ-LIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEI 82 (336)
Q Consensus 4 ~G~~l~~~l~~~~gWr~~f~i~~i~~~i~-~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
+|+.++..+.+..|||+.|++.++..++. .+..+++||+|+. +.++
T Consensus 147 ~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---------------------------- 193 (394)
T PRK11652 147 LAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPA-----DARR---------------------------- 193 (394)
T ss_pred HHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCcc-----ccch----------------------------
Confidence 45566666667789999999976655544 4445678887531 0000
Q ss_pred hhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhh
Q 019756 83 SQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLM 158 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~ 158 (336)
++.+..+++.++++..+...+..+... .+...+..+.+.+.++ .|.+.. .......++.+++..+.+++.
T Consensus 194 --~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 267 (394)
T PRK11652 194 --TRVLASYRTLLSNRRFNCYLLMLIGTL----AGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPN 267 (394)
T ss_pred --hHHHHHHHHHHcChHHHHHHHHHHHHH----HHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001223444555555444333222221 1222333334445554 676654 333444556667777777777
Q ss_pred hhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHH
Q 019756 159 DKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSA 238 (336)
Q Consensus 159 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
||.+|+... +.....++............ ...+...........
T Consensus 268 ~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 311 (394)
T PRK11652 268 KRFSTLMWQ------------------------------SVICCLLAGLLMWIPGWFGV------MNVWTLLVPAALFFF 311 (394)
T ss_pred HHHHHHHHH------------------------------HHHHHHHHHHHHHHHHHhcc------ccHHHHHHHHHHHHH
Confidence 777733222 11112222111111100000 111222222222222
Q ss_pred HhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 239 FNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
+.+ ...+....+..|.+| +.++++.++.+....+|+.+++.+.+.+..
T Consensus 312 g~~-~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 312 GAG-MLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHH-HHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 222 234556677788887 578999999999999999999998887655
No 134
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.21 E-value=6.6e-10 Score=101.06 Aligned_cols=153 Identities=15% Similarity=0.150 Sum_probs=114.7
Q ss_pred hhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 117 GASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
.........|.+.++.+.+.. .......+...++.++.|+++||+|||+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~------------------------ 69 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLL------------------------ 69 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHH------------------------
Confidence 345566667777888887765 56667778889999999999999999998888
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+.....++....... .+.........+.+.......+....++.|.+|+++|+++.++.+....
T Consensus 70 ----~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (352)
T cd06174 70 ----GLLLFALGSLLLAFA------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFG 133 (352)
T ss_pred ----HHHHHHHHHHHHHHh------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHH
Confidence 777777777766543 1122233333344444444566778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHH
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFV 309 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~ 309 (336)
+|..++|.+.+.+.+ .+++..+.+.+.+.++..+..
T Consensus 134 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 134 LGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL 170 (352)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888 567777777776666555443
No 135
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.21 E-value=1.3e-09 Score=102.89 Aligned_cols=181 Identities=10% Similarity=0.001 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhHHHHHH-HhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccc
Q 019756 100 ANSLIIGVGLMLLQQFGGASAMAYYTSSIFE-KAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRT 175 (336)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~ 175 (336)
.++.+....+.+...+...+......+.+.+ +++++.+ +......+...++.+..|++.||+|.|+++.+
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~------ 105 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVF------ 105 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH------
Confidence 3444444455555555556666666666655 6888876 45555666677777888999999999998887
Q ss_pred ccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhccc
Q 019756 176 LFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEI 255 (336)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 255 (336)
+.....+..+..++..... ..++..++....+.+..+ +..+.....++++
T Consensus 106 ----------------------~~ll~~i~~~~~~~a~~~~-------~~s~~~lli~r~l~Gigg-~~f~~~~~~vs~w 155 (462)
T PRK15034 106 ----------------------STAILIIPCVWLGIAVQNP-------NTPFGIFIVIALLCGFAG-ANFASSMGNISFF 155 (462)
T ss_pred ----------------------HHHHHHHHHHHHHHHHccc-------CCCHHHHHHHHHHHHHHH-HhHHHHHHHHHHH
Confidence 6666666666555321000 112223333333333332 2445567889999
Q ss_pred CCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH------h-------------hcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 256 FPINVKASAGSLVILICWSCSWIVTYTFNFMMQ------W-------------SSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 256 ~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------~-------------~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
+|+++||++.|+....+++|..+++.+.+.+.. . +++...++.+.+.++.+++.+++.++.
T Consensus 156 fp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 156 FPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred CCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 999999999999987888888777666655331 1 234445566666666666666665553
No 136
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.20 E-value=5.5e-10 Score=107.19 Aligned_cols=140 Identities=16% Similarity=0.156 Sum_probs=98.7
Q ss_pred HHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhh-cCCceeeeeecccccccccccccccccccccchhhhh
Q 019756 122 AYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDK-AGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQI 197 (336)
Q Consensus 122 ~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (336)
.+...++.+++|.+.. +.............+++|+++|| +|||+++..
T Consensus 35 ~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~---------------------------- 86 (489)
T PRK10207 35 GILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL---------------------------- 86 (489)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHH----------------------------
Confidence 3334444566787765 33334444555666789999999 999999999
Q ss_pred hhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCcc--chhhhhHHHHHHHHHH
Q 019756 198 SACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPIN--VKASAGSLVILICWSC 275 (336)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g 275 (336)
+.++.+++.+.++... .....+.......+.......+...+++.|.+|++ .|+.+.++.+...++|
T Consensus 87 g~~~~~~g~~~~~~~~-----------~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig 155 (489)
T PRK10207 87 GAIVLAIGYFMTGMSL-----------LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIG 155 (489)
T ss_pred HHHHHHHHHHHHHHhc-----------cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHH
Confidence 8888888887776431 00111212233334444445566779999999887 4578999999999999
Q ss_pred HHHHHHHHHHHHH-hhcchhhhHHHH
Q 019756 276 SWIVTYTFNFMMQ-WSSAGTFFIFSG 300 (336)
Q Consensus 276 ~~~~~~~~~~l~~-~~~~~~~~~~~~ 300 (336)
..++|.+.+.+.+ .+|++.|++.++
T Consensus 156 ~~~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 156 SLISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred HHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 9999999999988 788888877544
No 137
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.20 E-value=5.5e-10 Score=102.80 Aligned_cols=130 Identities=10% Similarity=0.014 Sum_probs=82.7
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcC-Cceeeeeecccccccccccccccccccccch
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAG-RKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~g-rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
......+.|.+.++.|.+.. .......++.+++.+..+++.||++ ||+.+..
T Consensus 213 ~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~------------------------ 268 (355)
T TIGR00896 213 YYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAV------------------------ 268 (355)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHH------------------------
Confidence 34455677888888787765 5666777889999999999999995 5555544
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccC-CccchhhhhHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIF-PINVKASAGSLVILIC 272 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~ 272 (336)
+....+++....... + .. ... ..... .+.......+...+.+.+.. +++.+++..++.+..+
T Consensus 269 ----~~~~~~~~~~~~~~~---~-------~~-~~~-~~~~l-~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 331 (355)
T TIGR00896 269 ----LAVLQLVGLCGLLFA---P-------MH-GLW-AWALV-LGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIG 331 (355)
T ss_pred ----HHHHHHHHHHHHHHh---h-------hh-HHH-HHHHH-HHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 444454544433321 0 01 111 11111 22222222344445555444 5567789999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 019756 273 WSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 273 ~~g~~~~~~~~~~l~~ 288 (336)
++++.++|.+.+.+.|
T Consensus 332 ~~~~~~gp~~~G~l~~ 347 (355)
T TIGR00896 332 YLLAALGPLFVGVLHD 347 (355)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999988
No 138
>PRK12382 putative transporter; Provisional
Probab=99.20 E-value=3.8e-10 Score=105.30 Aligned_cols=150 Identities=9% Similarity=-0.096 Sum_probs=96.1
Q ss_pred hHHHHHhHHH-HHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 118 ASAMAYYTSS-IFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 118 ~~~~~~~~~~-~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
........|. +.+++|.+.. +......+...++.+..|+++||+|||+.++.
T Consensus 31 ~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~------------------------ 86 (392)
T PRK12382 31 VGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQ------------------------ 86 (392)
T ss_pred HHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHH------------------------
Confidence 3344444554 4567888776 55666677788889999999999999998887
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+.+...++.+........+.. ...+...++....+.+.......+...+++.|.+|+++|++++++......
T Consensus 87 ----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~ 158 (392)
T PRK12382 87 ----GMLACGLAGLAYLLAAILPVS----APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMY 158 (392)
T ss_pred ----HHHHHHHHHHHHHhhhccccc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHH
Confidence 655554443322211111100 011222233333333333323334456778899999999999999998889
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHH
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFS 299 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~ 299 (336)
.|..++|.+.+.+.+ .+|...+.+..
T Consensus 159 ~g~~~g~~~~~~l~~~~g~~~~~~~~~ 185 (392)
T PRK12382 159 GALAAGAPLGLLLHSHFGFAALALTTM 185 (392)
T ss_pred HHHHHHHHHHHHHHhccChHHHHHHHH
Confidence 999999999988877 66655444433
No 139
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.20 E-value=3.1e-09 Score=101.26 Aligned_cols=161 Identities=17% Similarity=0.117 Sum_probs=106.3
Q ss_pred HHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCc--eeeeeecccccccccccccccccccccchhhhhhhh
Q 019756 126 SSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRK--PLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISAC 200 (336)
Q Consensus 126 ~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (336)
.+-.+++|++.. .......+.+++|+++++++.||+|.| +.+++ +.+
T Consensus 306 i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~----------------------------~l~ 357 (477)
T PF11700_consen 306 IYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLI----------------------------SLI 357 (477)
T ss_pred HHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH----------------------------HHH
Confidence 333446788876 666778888999999999999999999 66555 333
Q ss_pred hhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHH
Q 019756 201 GMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVT 280 (336)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 280 (336)
...+.++. +.....+... ...+.+.. ..+....+.+..+..+..-++.+|+.|+++.+...|+....++..++++|
T Consensus 358 ~~~~i~~~-g~~G~~~~~~--g~~~~~~f-~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGP 433 (477)
T PF11700_consen 358 LWIIIPLY-GLFGFWPSFF--GLKSPWEF-WVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGP 433 (477)
T ss_pred HHHHHHHH-HHHHhhhccc--CcccHHHH-HHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 33221111 1111111110 00112222 22222344444455678889999999999999999999999999999999
Q ss_pred HHHHHHHH--hhcchhhhHHHHHHHHHHHHHHhhccCCCCC
Q 019756 281 YTFNFMMQ--WSSAGTFFIFSGIGFFTVLFVAKIVPETKGR 319 (336)
Q Consensus 281 ~~~~~l~~--~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~ 319 (336)
.+.+.+.+ .+.+..+....++.+++.++. ..+++.|++
T Consensus 434 ll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~g~ 473 (477)
T PF11700_consen 434 LLFGLITDATGSQRYGFLFLLVLFLIGLILL-FFVDVEKGR 473 (477)
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-hhccchhhh
Confidence 99999998 346667777777666666644 555655554
No 140
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.19 E-value=2.7e-10 Score=106.78 Aligned_cols=159 Identities=11% Similarity=-0.027 Sum_probs=98.7
Q ss_pred HHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhh
Q 019756 120 AMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQ 196 (336)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (336)
....+.+.+.++.|.+.. +......++..++.++.|++.||+|||+.+..
T Consensus 31 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~--------------------------- 83 (402)
T TIGR00897 31 LEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMI--------------------------- 83 (402)
T ss_pred hHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH---------------------------
Confidence 344455666788888765 56667778889999999999999999999887
Q ss_pred hhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHH
Q 019756 197 ISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCS 276 (336)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 276 (336)
+.....++........ .. ..++..+.....+.+.......+....++.|.+|+++|++++|+.+....+|.
T Consensus 84 -~~~~~~~~~~~~~~~~-~~-------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 154 (402)
T TIGR00897 84 -GLLLWCVGHAAFIVFG-LG-------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGI 154 (402)
T ss_pred -HHHHHHHHHHHHHHHh-cc-------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 6666666554332110 00 01122222222222222222233345677889999999999999999999886
Q ss_pred -HHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhcc
Q 019756 277 -WIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 277 -~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
.++|.+.+.+.+ .++...++.......+..++..++.+
T Consensus 155 ~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 194 (402)
T TIGR00897 155 GVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNK 194 (402)
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 578888877766 55444444433333333333333333
No 141
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.18 E-value=1.8e-10 Score=90.47 Aligned_cols=135 Identities=19% Similarity=0.214 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccc
Q 019756 142 GIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNM 221 (336)
Q Consensus 142 ~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (336)
...++.+++.+..+++.||+|||+.+.. +.....++.+.....
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~----------------------------~~~~~~~~~~~~~~~--------- 48 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLV----------------------------GLFIFVLSTAMFALS--------- 48 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHH----------------------------HHHHHHHHHHHHHHh---------
Confidence 3456788899999999999999998877 666555555544321
Q ss_pred cchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHH
Q 019756 222 NDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSG 300 (336)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~ 300 (336)
...+...+. ..+.+.......+....++.|.+|++.|+++.++.+....+|..++|.+.+.+.+ .++...+.+.+.
T Consensus 49 --~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (141)
T TIGR00880 49 --SNITVLIIA-RFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAI 125 (141)
T ss_pred --ccHHHHHHH-HHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHH
Confidence 111222222 2222222223345667889999999999999999999999999999999998887 667778888888
Q ss_pred HHHHHHHHHHhhccCC
Q 019756 301 IGFFTVLFVAKIVPET 316 (336)
Q Consensus 301 ~~~~~~i~~~~~~~et 316 (336)
+.++..+...+..||+
T Consensus 126 ~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 126 LALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHHHHhhcCCCC
Confidence 7777777666666664
No 142
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.18 E-value=1.8e-09 Score=100.75 Aligned_cols=188 Identities=14% Similarity=0.124 Sum_probs=114.8
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhC-CCch---hHHHHHHHHHHHHHHHHHHhhhhcCCcee
Q 019756 91 LLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAG-ASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPL 166 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~ 166 (336)
..+++|++.....++..++.... ......|.+...++.| .+.. .......+..++.....+++..|+|.|++
T Consensus 200 ~~~llk~~~~~~Fll~~~l~~~~----~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~l 275 (400)
T PF03825_consen 200 ALKLLKNPRFLVFLLAAFLIGIS----HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWL 275 (400)
T ss_pred HHHHhcCccHHHHHHHHHHHHHH----HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 34677777666555544333322 3344455555677777 4433 33445567788999999999999999998
Q ss_pred eeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccc
Q 019756 167 LMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAG 246 (336)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (336)
+.+ +.+..++=..+++.. .+ +....+.....-...++..-.....
T Consensus 276 l~~----------------------------a~~~~~vR~~l~a~~---~~----~~~~~~~~~~l~q~lhG~tf~~~~~ 320 (400)
T PF03825_consen 276 LLL----------------------------ALVAYAVRWLLYAYF---SD----PWPFIVALQLLGQLLHGLTFGLFHA 320 (400)
T ss_pred HHH----------------------------HHHHHHHHHHHHHHh---cC----CcHHHHHHHHHHHhhhhHHHHHHHH
Confidence 888 666666655555422 00 0011111111101112221112233
Q ss_pred hhhhhhcccCCccchhhhhHHHHHH-HHHHHHHHHHHHHHHHH-hhcc------hhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 247 IPFVIMSEIFPINVKASAGSLVILI-CWSCSWIVTYTFNFMMQ-WSSA------GTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 247 ~~~~~~~e~~p~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~-~~~~------~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
....++.+..|++.|+++.++.+.. ..+|+.++..+.|.+.| .+.. ..+.+.+++.++..++.+++.+|++
T Consensus 321 a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 321 ASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 4568999999999999999998876 57899999999999998 4433 3344555555555555555556554
No 143
>PRK09952 shikimate transporter; Provisional
Probab=99.17 E-value=1.2e-09 Score=103.67 Aligned_cols=141 Identities=21% Similarity=0.150 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccc
Q 019756 144 AIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMND 223 (336)
Q Consensus 144 ~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (336)
.++..+|.++.|+++||+|||+.+.. +..+.+++.+++++........
T Consensus 74 ~~~~~~g~~~~G~l~Dr~Grr~~l~~----------------------------~~~~~~~~~~~~~~~~~~~~~~---- 121 (438)
T PRK09952 74 FLFRPLGGVVFGHFGDRLGRKRMLML----------------------------TVWMMGIATALIGLLPSFSTIG---- 121 (438)
T ss_pred HHHHhhHHHHHHHHHHhhccHHHHHH----------------------------HHHHHHHHHHHHhcCCcHHHHH----
Confidence 34567888999999999999999988 8888888877776531111000
Q ss_pred hhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH---------Hhhcchh
Q 019756 224 AAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMM---------QWSSAGT 294 (336)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~---------~~~~~~~ 294 (336)
......++....+.+....+..+....+++|.+|+++|+...+.......+|..+++.+...+. .++|+..
T Consensus 122 ~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~ 201 (438)
T PRK09952 122 WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIP 201 (438)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHH
Confidence 0011123444445555555556666789999999999999999998888888888876655443 2678888
Q ss_pred hhHHHHHHHHHHHHHHhhccCCC
Q 019756 295 FFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 295 ~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
|.+.++..++. .......||++
T Consensus 202 f~~~~~~~l~~-~~l~~~~~es~ 223 (438)
T PRK09952 202 FLFSIVLVLIA-LWVRNGMEESA 223 (438)
T ss_pred HHHHHHHHHHH-HHHHHhCCCCh
Confidence 88776655443 22333456654
No 144
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.17 E-value=8.9e-10 Score=108.87 Aligned_cols=183 Identities=13% Similarity=0.081 Sum_probs=129.2
Q ss_pred HHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccccccccc
Q 019756 105 IGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFD 181 (336)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~ 181 (336)
+...+..+.+.........-.+.+.++++.+.. +......++..++.++.+++.||.|||+.+.+
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~------------ 103 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGI------------ 103 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEe------------
Confidence 333334444443345556667778888887765 66777888899999999999999999999999
Q ss_pred ccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccc-------------------------------------cc-
Q 019756 182 FVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNM-------------------------------------ND- 223 (336)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~- 223 (336)
+.+++++++++.++.-+..+.... ..
T Consensus 104 ----------------g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~ 167 (633)
T TIGR00805 104 ----------------GCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHK 167 (633)
T ss_pred ----------------cHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccC
Confidence 999999999888765322110000 00
Q ss_pred -hhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-h------------
Q 019756 224 -AAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-W------------ 289 (336)
Q Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~------------ 289 (336)
...+..++...++.+.+.....+...+++.|.+|++.|+...|+.+....+|..+++.+.+.+.+ +
T Consensus 168 ~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~ 247 (633)
T TIGR00805 168 ESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVI 247 (633)
T ss_pred CCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCC
Confidence 01234445555666666666677888999999999999999999999999999999999988775 1
Q ss_pred ----------hcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 290 ----------SSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 290 ----------~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
.|+..|++.+++.++.++.. ++.|++
T Consensus 248 l~~~dprWiGaWwl~Fli~g~l~~l~~v~l-~~~p~~ 283 (633)
T TIGR00805 248 LTPTDPRWIGAWWIGFLICGGVALLTSIPF-FFFPKA 283 (633)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHH-HhCccc
Confidence 14455777777766665543 444543
No 145
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.16 E-value=9.7e-10 Score=101.55 Aligned_cols=160 Identities=14% Similarity=0.012 Sum_probs=102.2
Q ss_pred HHHHhHHH-HHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 120 AMAYYTSS-IFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 120 ~~~~~~~~-~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
......|. +.++.|.+.. +......+...+.....|.++||+|||+.++..
T Consensus 15 ~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~------------------------- 69 (375)
T TIGR00899 15 LQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILF------------------------- 69 (375)
T ss_pred HHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH-------------------------
Confidence 33344443 4567788766 444455566778888999999999998865540
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhh--hHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASA--GSLVILICW 273 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~--~~~~~~~~~ 273 (336)
+.....++....... .+.+..++. ..+.+.......+....+..|..|++.|+.+ .+.......
T Consensus 70 --~~~~~~~~~~~~~~~-----------~~~~~l~~~-~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (375)
T TIGR00899 70 --CCLLAALACLLFAWN-----------RNYFLLLVL-GVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQIS 135 (375)
T ss_pred --HHHHHHHHHHHHHhc-----------chHHHHHHH-HHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHh
Confidence 223333333333321 111222222 2222233333455666777888887777654 577777788
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
+|..++|.+.+.+.+ .+|+..|++.+.+.++..++.++++||.++
T Consensus 136 ~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 136 LAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred HHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 999999999998887 788899999888877777766666777543
No 146
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.15 E-value=2.2e-10 Score=110.48 Aligned_cols=152 Identities=13% Similarity=0.118 Sum_probs=105.5
Q ss_pred HHHHhHHHHHHHhCCCch--hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhh
Q 019756 120 AMAYYTSSIFEKAGASGS--IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQI 197 (336)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (336)
....-++.+..+.|-++. +......+...++..+.|.++|.+|||..++.
T Consensus 62 ~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~---------------------------- 113 (599)
T PF06609_consen 62 LPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFII---------------------------- 113 (599)
T ss_pred ccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHH----------------------------
Confidence 334445677888887665 77777888889999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHH
Q 019756 198 SACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSW 277 (336)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 277 (336)
+.++..+++++.+-. .+...+++-..+.+.. .|........++|+.|.+.|..+.++.....-....
T Consensus 114 g~~l~vvG~Iv~atA------------~~~~~~iag~~l~Gvg-aG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~ 180 (599)
T PF06609_consen 114 GSLLGVVGSIVCATA------------QNMNTFIAGMVLYGVG-AGVQELAALAISELVPNKWRGLGLAIASIPFIITTW 180 (599)
T ss_pred HHHHHHhHHHHhhcC------------CcHHHHHHHHHHHHHh-hHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhc
Confidence 888888888888732 1122222222222222 333344566789999999998887766655444444
Q ss_pred HHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhh
Q 019756 278 IVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 278 ~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
.++.+...+.. .+|+|.|++.++...++.+...++
T Consensus 181 ~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 181 ISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred ccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 56666655544 789999988888777766654444
No 147
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.15 E-value=1.2e-09 Score=105.17 Aligned_cols=150 Identities=16% Similarity=0.093 Sum_probs=96.1
Q ss_pred hHHHHHhHHHH-HHHhCCCchh---HHHHHHHHHHHHHHHHHHhhhh-cCCceeeeeecccccccccccccccccccccc
Q 019756 118 ASAMAYYTSSI-FEKAGASGSI---GSRGIAIIQIPAVITSVLLMDK-AGRKPLLMVITTSRTLFKMFDFVDQRGYENGY 192 (336)
Q Consensus 118 ~~~~~~~~~~~-~~~~g~~~~~---~~~~~~~~~~~g~~~~~~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (336)
++....+++.+ .+++|.+... .............+++|+++|| +|||+.+..
T Consensus 37 ~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~----------------------- 93 (500)
T PRK09584 37 YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIML----------------------- 93 (500)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH-----------------------
Confidence 33444445544 4678887652 2222222333444689999999 599999888
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccc--hhhhhHHHHH
Q 019756 193 QYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINV--KASAGSLVIL 270 (336)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~~~~~~ 270 (336)
+.++.+++..+++... .......+... +.+.......+...+++.|.+|++. |..+.++.+.
T Consensus 94 -----g~~~~~ig~~l~~~~~----------~~~~~l~~~~~-l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~ 157 (500)
T PRK09584 94 -----GAIVLAIGYALVAWSG----------HDAGIVYMGMA-TIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYM 157 (500)
T ss_pred -----HHHHHHHHHHHHHHhc----------ccHHHHHHHHH-HHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHH
Confidence 7777777766665320 01111222222 2233333344566688999998653 4567888999
Q ss_pred HHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHH
Q 019756 271 ICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTV 306 (336)
Q Consensus 271 ~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 306 (336)
..++|..++|.+.+.+.+ .+|++.|.+.++...++.
T Consensus 158 ~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 158 SINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 999999999999999988 788888887765444433
No 148
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.15 E-value=8.2e-10 Score=103.25 Aligned_cols=146 Identities=10% Similarity=-0.011 Sum_probs=107.9
Q ss_pred HHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 119 SAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 119 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
.......|.+.+++|.+.. +......++..++.+..|+++||+|||+++..
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~-------------------------- 79 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAI-------------------------- 79 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHH--------------------------
Confidence 4566778899999998876 56666677888999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSC 275 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 275 (336)
+..+.+++....+.. .+.+..++ ...+.+.......+....++.|.+| ++|+.++++.......|
T Consensus 80 --~~~l~~~~~~~~~~a-----------~~~~~ll~-~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g 144 (393)
T PRK09705 80 --SLLLIAVGALMRELY-----------PQSALLLS-SALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGG 144 (393)
T ss_pred --HHHHHHHHHHHHHHC-----------cchHHHHH-HHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHH
Confidence 888888888887753 11222223 3333333333334555678889887 77999999999999999
Q ss_pred HHHHHHHHHHHHH--hhcchhhhHHHHHHHHH
Q 019756 276 SWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFT 305 (336)
Q Consensus 276 ~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~ 305 (336)
..+++.+.+.+.+ .+|+..+.+.+...++.
T Consensus 145 ~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 145 GGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 9999999888777 36777666655554443
No 149
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.14 E-value=1.1e-09 Score=104.85 Aligned_cols=150 Identities=13% Similarity=0.093 Sum_probs=107.3
Q ss_pred hHHHHHhHHHHHHH---hCCCch---hHHHHHHHHHHHHHHHHHHhhhh-cCCceeeeeecccccccccccccccccccc
Q 019756 118 ASAMAYYTSSIFEK---AGASGS---IGSRGIAIIQIPAVITSVLLMDK-AGRKPLLMVITTSRTLFKMFDFVDQRGYEN 190 (336)
Q Consensus 118 ~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (336)
++....++|.++.+ .|.+.. .......+...++.+.+|+++|| +|||+++.+
T Consensus 26 ~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~--------------------- 84 (475)
T TIGR00924 26 YYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL--------------------- 84 (475)
T ss_pred HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH---------------------
Confidence 44555556665554 577665 55666677889999999999999 899999988
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccc---hhhhhHH
Q 019756 191 GYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINV---KASAGSL 267 (336)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~---r~~~~~~ 267 (336)
+.++.+++.++++.. ...+...+... +.+.......+...++++|.+|++. |+++.++
T Consensus 85 -------~~~~~~~g~~~~~~~-----------~~~~~~~~~~~-l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~ 145 (475)
T TIGR00924 85 -------GGIVLMLGHFMLAMS-----------IYPDLIFYGLG-TIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTL 145 (475)
T ss_pred -------HHHHHHHHHHHHHhc-----------ccHhHHHHHHH-HHHhccccccCCHHHHHHHhcCCCCcccccceehh
Confidence 887777777766532 11122222222 2333333345666788999998754 8999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHH
Q 019756 268 VILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVL 307 (336)
Q Consensus 268 ~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i 307 (336)
.+...++|.+++|.+.+.+.+ .+|+..|.+.++..+++.+
T Consensus 146 ~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l 186 (475)
T TIGR00924 146 FYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLL 186 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 999999999999999999988 6888888887765555443
No 150
>PRK09669 putative symporter YagG; Provisional
Probab=99.14 E-value=1e-09 Score=104.22 Aligned_cols=161 Identities=12% Similarity=0.040 Sum_probs=89.0
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHhhhhcCCceeee
Q 019756 89 ARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSIGSRGIAIIQIPAVITSVLLMDKAGRKPLLM 168 (336)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~ 168 (336)
+.+++.++++.++......++.............+|..+..+.... .........+..+++.++.++++||+|||+.+.
T Consensus 220 ~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~-~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~ 298 (444)
T PRK09669 220 KDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDL-ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFK 298 (444)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 4566777777766665544333222221122223333322211000 012333444666788889999999999999877
Q ss_pred eecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchh
Q 019756 169 VITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIP 248 (336)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (336)
. +....++....+. ..+. ...+...+... +.+.......+..
T Consensus 299 ~----------------------------~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~-i~g~~~~~~~~~~ 340 (444)
T PRK09669 299 W----------------------------TIVAFVILSALIF---FIPP------SNVWLIFALNI-LFNFIQNLTTPLQ 340 (444)
T ss_pred H----------------------------HHHHHHHHHHHHH---HhCc------chHHHHHHHHH-HHHHHHHHHHHHH
Confidence 6 5443332222111 1111 11122222222 2333333445677
Q ss_pred hhhhcccCC-------ccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 249 FVIMSEIFP-------INVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 249 ~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
+++++|..+ .+..|...|..+....+|..+++.+.+.+.+
T Consensus 341 ~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 341 WSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred HHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889998875 2334566788889999999999999998887
No 151
>PRK10133 L-fucose transporter; Provisional
Probab=99.13 E-value=2.2e-09 Score=101.75 Aligned_cols=169 Identities=12% Similarity=-0.005 Sum_probs=98.8
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHH-HH-HhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCce
Q 019756 91 LLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSI-FE-KAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKP 165 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~ 165 (336)
.+++++++..+...+..++.... ......|.+.+ .+ ..|.++. .......++.++|.+.++++.||+|||+
T Consensus 251 ~~~ll~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~ 326 (438)
T PRK10133 251 LSRLARIRHWRWAVLAQFCYVGA----QTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK 326 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHH----HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 45666666655444333222222 22222334433 33 4577765 5567778888999999999999999999
Q ss_pred eeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCcc
Q 019756 166 LLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLA 245 (336)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (336)
++.. +..+..+.+.+... .+. . ..+..+.. .+++.....
T Consensus 327 ~l~~----------------------------~~~~~~~~~~~~~~---~~~------~---~~~~~~~l-~glg~~~i~ 365 (438)
T PRK10133 327 VLAA----------------------------YALIAMALCLISAF---AGG------H---VGLIALTL-CSAFMSIQY 365 (438)
T ss_pred HHHH----------------------------HHHHHHHHHHHHHH---cCC------h---HHHHHHHH-HHHHHHHHH
Confidence 8776 54444433332221 110 1 11122222 233333445
Q ss_pred chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hh-cchhhhHHHHHHHHHH
Q 019756 246 GIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WS-SAGTFFIFSGIGFFTV 306 (336)
Q Consensus 246 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~-~~~~~~~~~~~~~~~~ 306 (336)
|..++...|.+|++ .+++.++.. ...+|+.++|.+.+.+.+ .+ ....+++...+.+...
T Consensus 366 P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 366 PTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 67778888887764 577788776 455788888888888877 44 4566665544444333
No 152
>TIGR00898 2A0119 cation transport protein.
Probab=99.13 E-value=3e-10 Score=109.64 Aligned_cols=151 Identities=19% Similarity=0.167 Sum_probs=112.4
Q ss_pred HhHHHHHHHhCCC---ch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhh
Q 019756 123 YYTSSIFEKAGAS---GS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQ 196 (336)
Q Consensus 123 ~~~~~~~~~~g~~---~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (336)
.+.+.+.++.+.+ .. +......++.+++.++.|+++||+|||+++.+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~--------------------------- 162 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLL--------------------------- 162 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHH---------------------------
Confidence 3456677777776 22 66777888899999999999999999999888
Q ss_pred hhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHH
Q 019756 197 ISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCS 276 (336)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 276 (336)
+.++.+++.+..++. .+...++....+.+....+..+...+++.|.+|++.|+.+.++......+|.
T Consensus 163 -~~~~~~i~~~~~~~~------------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~ 229 (505)
T TIGR00898 163 -STLVTAVSGVLTAFS------------PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGL 229 (505)
T ss_pred -HHHHHHHHHHHHHHc------------ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHH
Confidence 777777766665532 1223334444455555555577788999999999999999999988888898
Q ss_pred HHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 277 WIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 277 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
++++.+...+.+ |++.+++.++..++..+.. +++||+
T Consensus 230 ~~~~~~~~~~~~--wr~~~~~~~i~~~~~~~~~-~~~~es 266 (505)
T TIGR00898 230 VLLPLVAYFIPD--WRWLQLAVSLPTFLFFLLS-WFVPES 266 (505)
T ss_pred HHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 888888766554 7777887777766665544 667886
No 153
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.11 E-value=1.7e-09 Score=100.65 Aligned_cols=133 Identities=6% Similarity=-0.025 Sum_probs=97.3
Q ss_pred hhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 117 GASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
.......+.|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..
T Consensus 21 ~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~------------------------ 76 (381)
T PRK03633 21 AIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYL------------------------ 76 (381)
T ss_pred hhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH------------------------
Confidence 355667788888899988765 66677778889999999999999999999888
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+....++++...+.. .+.+..++ ...+.+.......+.....+.|..|++.|+++++.......
T Consensus 77 ----~~~~~~~~~~~~~~~-----------~~~~~l~~-~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (381)
T PRK03633 77 ----ASLIFAAGCAGLGLM-----------VGFWSWLA-WRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYY 140 (381)
T ss_pred ----HHHHHHHHHHHHHHh-----------ccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 777777766665532 11222223 23333333323334444566788888999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 019756 274 SCSWIVTYTFNFMMQW 289 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~~ 289 (336)
+|..++|.+.+.+.+.
T Consensus 141 ~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 141 LGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHhccccc
Confidence 9999999999887663
No 154
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.11 E-value=2.5e-09 Score=100.51 Aligned_cols=155 Identities=10% Similarity=-0.037 Sum_probs=109.3
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
........|.+.++.+.+.. +......++..++++..+++.||+|||+.+..
T Consensus 19 ~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~------------------------- 73 (410)
T TIGR00885 19 NDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILL------------------------- 73 (410)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH-------------------------
Confidence 34555777888888898875 66777788899999999999999999999998
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+..+.++++.+...... ..++..++....+.+.......+....++.+..|++.|++..++.+....+
T Consensus 74 ---g~~l~~~g~~l~~~~~~---------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 141 (410)
T TIGR00885 74 ---GLFLYALGAFLFWPAAE---------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPF 141 (410)
T ss_pred ---HHHHHHHHHHHHHHHHh---------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHH
Confidence 88888777766542210 111222222222222222222344457788889999999999999999999
Q ss_pred HHHHHHHHHHHHHH---------------------------hhcchhhhHHHHHHHHHHHHH
Q 019756 275 CSWIVTYTFNFMMQ---------------------------WSSAGTFFIFSGIGFFTVLFV 309 (336)
Q Consensus 275 g~~~~~~~~~~l~~---------------------------~~~~~~~~~~~~~~~~~~i~~ 309 (336)
|..++|.+.+.+.. .+|+.+|.+.+++.++..++.
T Consensus 142 G~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 142 GSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999877642 247777877777666654443
No 155
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.10 E-value=3.9e-10 Score=103.91 Aligned_cols=119 Identities=21% Similarity=0.240 Sum_probs=70.2
Q ss_pred HHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 120 AMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 120 ~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
....+.|.++++ .|.+.. .......+..+++.+++++++||+|||+....
T Consensus 243 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~-------------------------- 296 (366)
T TIGR00886 243 GVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLM-------------------------- 296 (366)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHH--------------------------
Confidence 444555555544 576654 44555667788899999999999999887666
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSC 275 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 275 (336)
+......+...+.... ... ...+...........+.+.+ .+..+.+++|..| +.+|+++|+.+..+++|
T Consensus 297 --~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 297 --SFLGVAMGAFLVVLGL--VSP-----LSLAVFIVLFVALFFFSGAG-NGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred --HHHHHHHHHHHHHhcC--CCc-----chHHHHHHHHHHHHHHhccc-cchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 4444444333332211 100 01122222222222333332 2345677888887 68999999999887765
No 156
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.10 E-value=7.6e-09 Score=97.83 Aligned_cols=201 Identities=14% Similarity=0.122 Sum_probs=129.1
Q ss_pred chHHHHHHhHHHHHHHHHH-HhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhHHHHHHh
Q 019756 17 PWRILALIGVIPCVLQLIG-LFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEARLLNLF 95 (336)
Q Consensus 17 gWr~~f~i~~i~~~i~~~~-~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (336)
+|++..++.++..++..++ .+..+|.++ +.+ .++++.+-.+.+++.+
T Consensus 175 ~~~~~~~v~~iv~~v~~~i~~~~~ke~~~------~~~--------------------------~~~~~~~~~~~~~~~~ 222 (428)
T PF13347_consen 175 GYRWMALVLAIVGLVFFLITFFFVKERSV------EVT--------------------------EQEKKISLRDSLRSLF 222 (428)
T ss_pred HHHHHHHHHHHHHHHHhhhhhheeeeccc------ccc--------------------------ccccccccccchhhhc
Confidence 6999998877766665544 455677111 000 0111122334567777
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccc
Q 019756 96 QRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSIGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRT 175 (336)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~ 175 (336)
+++..+......++..+..........+|..+..++.+.. +.......+..+++.++.++++||+|+|+.+..
T Consensus 223 ~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~-~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~------ 295 (428)
T PF13347_consen 223 RNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLI-SIFMLIFFVASIVGSPLWGRLSKRFGKKKVYII------ 295 (428)
T ss_pred ccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhh-HHHHHHHHHHHHHHHHHHHHHHHHccceeehhh------
Confidence 7877777666655555544443444555555544433221 245556778889999999999999999999988
Q ss_pred ccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhccc
Q 019756 176 LFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEI 255 (336)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 255 (336)
+..+.+++.....+... .+...........+....+....++++.+|+
T Consensus 296 ----------------------~~~~~~~~~~~~~~~~~----------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~ 343 (428)
T PF13347_consen 296 ----------------------GLLLAALGFLLLFFLGP----------GSPWLVLILFILAGIGYGAFFVIPWAMLADV 343 (428)
T ss_pred ----------------------hHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHhHhhhcccccccccccccc
Confidence 77777777666554311 1223333333344444445567788999998
Q ss_pred CCc-------cchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 256 FPI-------NVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 256 ~p~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
.+. +..|...|+.+....++..+++.+.+.+.+
T Consensus 344 id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 344 IDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred hhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 863 345788899999999999999999888776
No 157
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.10 E-value=3.1e-10 Score=104.78 Aligned_cols=186 Identities=15% Similarity=0.063 Sum_probs=118.2
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHh----CCCch---hHHHHHHHHHHHHHHHHHHhhhhcC
Q 019756 90 RLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKA----GASGS---IGSRGIAIIQIPAVITSVLLMDKAG 162 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~g 162 (336)
...+++|.++.+...+....... .+..+....+.++... +.+.. .......+..++...+..++.+|+|
T Consensus 212 ~~~~l~k~~~fw~~~l~v~g~~~----~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig 287 (412)
T PF01306_consen 212 DVLSLFKMRNFWFFVLFVIGVAA----IYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIG 287 (412)
T ss_dssp HHHHHTTSHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHhcchhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 35566777766665543322222 1233322233333332 22222 4455556678888899999999999
Q ss_pred CceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhc
Q 019756 163 RKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSI 242 (336)
Q Consensus 163 rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (336)
.|+.+++ +..++.+=....++. +.++. +...-..++.-..
T Consensus 288 ~k~~Lll----------------------------ag~i~~iRi~~~~~~-----------~~~~~-i~~~klLH~~e~~ 327 (412)
T PF01306_consen 288 AKNLLLL----------------------------AGVIMAIRIIGSGFA-----------TNPWV-ISLIKLLHALEFP 327 (412)
T ss_dssp HHHHHHH----------------------------HHHHHHHHHHHHHT-------------SHHH-HHHHHHHHHHHHH
T ss_pred hHhHHHH----------------------------HHHHHHHHHHHHhhh-----------cchHH-HHHHHHHHHHHHH
Confidence 9999988 777777766666643 22333 2333333332221
Q ss_pred CccchhhhhhcccCCccchhhhhHHH-HHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCCC
Q 019756 243 GLAGIPFVIMSEIFPINVKASAGSLV-ILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKGR 319 (336)
Q Consensus 243 ~~~~~~~~~~~e~~p~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~ 319 (336)
.......-|+++.+|++..++...+. +...++|..+.+.+.|.+.| .|...+|++++.+.++..++..+.+++.++.
T Consensus 328 l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 328 LLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 22233468999999999999999886 56688999999999999999 7788899999998888888777777655443
No 158
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.09 E-value=4.5e-09 Score=98.81 Aligned_cols=151 Identities=18% Similarity=0.065 Sum_probs=88.1
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhC--CCch---hHHHHHHHHHHHHHHHHHHhhhhcCCce
Q 019756 91 LLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAG--ASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKP 165 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~ 165 (336)
.++.++++..+...+..++..... .....|.+.+.++.+ .+.. ...........+|.++++++.||+++|+
T Consensus 225 ~~~~~~~~~~~~~~l~~f~yvg~e----~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~ 300 (410)
T TIGR00885 225 LSRLARIRHYREGVIAQFFYVGVQ----IMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK 300 (410)
T ss_pred HHHHHhChhHHHHHHHHHHHHHHH----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 345566665555444444433322 233345555555432 2222 2233334567899999999999999999
Q ss_pred eeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCcc
Q 019756 166 LLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLA 245 (336)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (336)
.+.+ +....++.+.+.... + .......+..++.+.+. ..
T Consensus 301 ~l~i----------------------------~~~~~~~~~ll~~~~---~---------~~~~~~~l~~~glf~s~-~f 339 (410)
T TIGR00885 301 VLMA----------------------------YAIIGMALCLGSIFA---G---------GHVGLYCLTLCSAFMSL-MF 339 (410)
T ss_pred HHHH----------------------------HHHHHHHHHHHHHHc---C---------ChHHHHHHHHHHHHHHH-HH
Confidence 8776 555555544444321 0 11122333333333333 33
Q ss_pred chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 246 GIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 246 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
|..++...+..+++.+..+.++.... +|+.+.|.+.+.+.|
T Consensus 340 p~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 340 PTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIID 380 (410)
T ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHH
Confidence 77788889988877655455554443 999999999999998
No 159
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.09 E-value=1.5e-09 Score=98.71 Aligned_cols=167 Identities=10% Similarity=-0.050 Sum_probs=122.5
Q ss_pred HHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccccccccccccc
Q 019756 109 LMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQ 185 (336)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~ 185 (336)
..+...++..+......+.+.+++++++. +......+...+..+.-|++.||+|.|+....
T Consensus 21 ~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~---------------- 84 (417)
T COG2223 21 LAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTIL---------------- 84 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHH----------------
Confidence 33444444456666677777788898887 66677777788889999999999999999888
Q ss_pred ccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhh
Q 019756 186 RGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAG 265 (336)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 265 (336)
+.++..+-++..++....++ .+..++.-..++ ...+.......++++.||++++|.++
T Consensus 85 ------------s~~l~~IP~~~~~~a~~~~~--------~~~ll~~gll~G--~~GasFav~m~~~s~~fP~~~qG~Al 142 (417)
T COG2223 85 ------------SMLLLLIPCLGLAFAVTYPS--------TWQLLVIGLLLG--LAGASFAVGMPNASFFFPKEKQGLAL 142 (417)
T ss_pred ------------HHHHHHHHHHHHHHHccCCc--------hHHHHHHHHHHh--cccceehcccccccccCChhhhhHHH
Confidence 77777777777776543221 122222222222 22233455578899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hh---cchhhhHHHHHHHHHHHHHHhhcc
Q 019756 266 SLVILICWSCSWIVTYTFNFMMQ-WS---SAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 266 ~~~~~~~~~g~~~~~~~~~~l~~-~~---~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
|+.. .+++|..+...+.+.+.. .+ |+.+..++....++..+..++...
T Consensus 143 GI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 143 GIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred HHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999 999999999999998887 55 778888888888887777777653
No 160
>PTZ00207 hypothetical protein; Provisional
Probab=99.07 E-value=7.1e-09 Score=100.57 Aligned_cols=163 Identities=12% Similarity=0.131 Sum_probs=105.8
Q ss_pred hHHHHHhHHHHHHHhCCCchhHHHHHHHHHH--HHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 118 ASAMAYYTSSIFEKAGASGSIGSRGIAIIQI--PAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
.+.+..+.+.+.+++|.+.........++.. .+.+..|++.||+|||+++.+
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vlli-------------------------- 96 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVL-------------------------- 96 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH--------------------------
Confidence 4566788888999999987633333333222 344578999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSC 275 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 275 (336)
+.+...++.++.++.....- ..+...+.....+.+.......+.....+.++|| +.||.+.|+......+|
T Consensus 97 --g~ll~~iG~ll~ala~~~~i------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLG 167 (591)
T PTZ00207 97 --SMTVFCLGTLLFALTFQEVI------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLG 167 (591)
T ss_pred --HHHHHHHHHHHHHHHhcccc------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHH
Confidence 88888888887775321100 0112222222222333332233444567788997 67999999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhccC
Q 019756 276 SWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIVPE 315 (336)
Q Consensus 276 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~e 315 (336)
+.+.+.+...+...++...+++.+++.++..++.+.++++
T Consensus 168 saI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 168 SAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 9865555444444456677777888777777766666543
No 161
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.06 E-value=1.6e-08 Score=95.94 Aligned_cols=152 Identities=14% Similarity=0.017 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCC-ceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhh
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGR-KPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLK 216 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (336)
+.....++...+.+++-.++.+|+|+ |....+ +.++.++++....+.....
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~----------------------------s~~~~~~~l~~~~~i~~~~ 360 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGI----------------------------VNIILAICLAATVLVTYVA 360 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH----------------------------HHHHHHHHHHHHHHHHhhh
Confidence 34445555556666777889999985 555566 6666666666665433221
Q ss_pred ccc-c-------ccchh--HHHHHHHHHHHHHHhhcCccchhhhhhcccCCcc--chhhhhHHHHHHHHHHHHHHHHHHH
Q 019756 217 EVK-N-------MNDAA--HILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPIN--VKASAGSLVILICWSCSWIVTYTFN 284 (336)
Q Consensus 217 ~~~-~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~~~~~~ 284 (336)
++. . ..+.. .+..++. +...+........++++++++..|++ ..|..+|+.|.+-.+...+.....+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g 439 (477)
T TIGR01301 361 KNSRYYDGDGESLPPPTGIKASALIV-FAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSG 439 (477)
T ss_pred hccccccccccccCcchhhHHHHHHH-HHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 110 0 00000 1222222 23333333345678899999999954 4588999999999999999998888
Q ss_pred HHHH---hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 285 FMMQ---WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 285 ~l~~---~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
.+.+ .+....+.+.++..+++++...+.+|+++.
T Consensus 440 ~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 440 PWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 8655 334556777778888888888888898764
No 162
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.06 E-value=3.5e-09 Score=97.43 Aligned_cols=160 Identities=11% Similarity=-0.049 Sum_probs=105.0
Q ss_pred HHHHhHHHHHHHhCCCchhHHHHH--HHHHHHHHHHHHHhhhhc-----CCceeee-eeccccccccccccccccccccc
Q 019756 120 AMAYYTSSIFEKAGASGSIGSRGI--AIIQIPAVITSVLLMDKA-----GRKPLLM-VITTSRTLFKMFDFVDQRGYENG 191 (336)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~g~~~~~~l~dr~-----grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~ 191 (336)
....-.|.+.++.|.+........ .+... ..++.|.++||+ |||+.++ .
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~---------------------- 62 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVGLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVL---------------------- 62 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCCCCccHHHHHH----------------------
Confidence 445567788899999887333333 22233 378999999998 8888643 4
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHH
Q 019756 192 YQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILI 271 (336)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 271 (336)
+.+..+++...+++. .+ ......+...............+...+++.|.+|+++|+.+.++....
T Consensus 63 ------~~~~~~~~~~~l~~~---~~------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~ 127 (356)
T TIGR00901 63 ------TQVLLLSLLLILSFL---VP------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVG 127 (356)
T ss_pred ------HHHHHHHHHHHHHcC---Cc------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHH
Confidence 444444444444321 11 111112222222233333334456678899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-hh--------cchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 272 CWSCSWIVTYTFNFMMQ-WS--------SAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 272 ~~~g~~~~~~~~~~l~~-~~--------~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
..+|.++++.+.+.+.+ .+ |+..|++.+++.++..+...+..||++
T Consensus 128 ~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 128 YRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred HHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999987776 55 888888888877776655555567754
No 163
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.06 E-value=6.1e-09 Score=100.25 Aligned_cols=162 Identities=10% Similarity=0.058 Sum_probs=109.0
Q ss_pred hHHHHHhHHHHHHHhCCCchhHHHHHHHHH-HHHHHHHHHhhhhc-----CCcee-eeeecccccccccccccccccccc
Q 019756 118 ASAMAYYTSSIFEKAGASGSIGSRGIAIIQ-IPAVITSVLLMDKA-----GRKPL-LMVITTSRTLFKMFDFVDQRGYEN 190 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~g~~~~~~l~dr~-----grr~~-l~~~~~~~~~~~~~~~~~~~~~~~ 190 (336)
........|...++.|.+.........++. ..+.++++.++||+ |||+. +..
T Consensus 28 ~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~--------------------- 86 (491)
T PRK11010 28 LALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLA--------------------- 86 (491)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchHHHHH---------------------
Confidence 445555677778888888764443332322 26889999999999 99986 444
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHH
Q 019756 191 GYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVIL 270 (336)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 270 (336)
+.+..+++...+++.. + ..+...+.....+...+.....+...++..|++|+++|+++.++...
T Consensus 87 -------~~i~~~~~~~~~a~~~--~-------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~ 150 (491)
T PRK11010 87 -------TQLLLLVAIAAMGFLE--P-------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVL 150 (491)
T ss_pred -------HHHHHHHHHHHHHHcC--C-------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHH
Confidence 5455555555544320 1 11122222222233333334555667999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 271 ICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 271 ~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
...+|..+++.+...+.+ .+|+..|++.+++.++..+..+ +.||++
T Consensus 151 g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~-~~~e~~ 198 (491)
T PRK11010 151 GYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL-LAPEPT 198 (491)
T ss_pred HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH-hcCCCc
Confidence 999999999999988887 4899999998887776655443 467764
No 164
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.06 E-value=2.1e-09 Score=102.70 Aligned_cols=128 Identities=10% Similarity=0.022 Sum_probs=81.5
Q ss_pred HhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHH
Q 019756 131 KAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCF 207 (336)
Q Consensus 131 ~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (336)
..|.++. ......+++.+++....+++.+|++.|+++.+ +.+..+++..
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~----------------------------~~~l~~~~~~ 333 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGV----------------------------TTLLYTLSSL 333 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHH----------------------------HHHHHHHHHh
Confidence 4677665 55566778888899999999999999988777 5555544443
Q ss_pred HHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 019756 208 LIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMM 287 (336)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 287 (336)
.........+... .....+............++....+. ..++++..|++.+|+..++.+...++|..+++.+++.+.
T Consensus 334 ~~~~l~~~~~~~~-gi~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~ 411 (468)
T TIGR00788 334 FDLILVKRWNLAF-GISDEVFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLM 411 (468)
T ss_pred Cceeeeecccccc-CCCCeeeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3221100000000 00001111111222233333333344 689999999999999999999999999999999998888
Q ss_pred H
Q 019756 288 Q 288 (336)
Q Consensus 288 ~ 288 (336)
+
T Consensus 412 ~ 412 (468)
T TIGR00788 412 E 412 (468)
T ss_pred H
Confidence 7
No 165
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.06 E-value=5.9e-10 Score=99.78 Aligned_cols=110 Identities=20% Similarity=0.142 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
......++.+++.+..+|.++||+|||+++.. ++...++...+.+..
T Consensus 72 flGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~----------------------------c~~~va~s~ll~~~S----- 118 (451)
T KOG2615|consen 72 FLGSSFSILQFISSPLWGCLSDRYGRKPVLLA----------------------------CLIGVALSYLLWALS----- 118 (451)
T ss_pred hHhhHHHHHHHHhhhhhhhhhhhhCchHHHHH----------------------------HHHHHHHHHHHHHHH-----
Confidence 56677888999999999999999999999988 777766665555532
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
.+...++...++.+.+ -|..++..++++|+++++.|+.+++..+....+|-+++|.+++++.+
T Consensus 119 -------~~F~afv~aR~l~Gi~-kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 119 -------RNFAAFVLARFLGGIF-KGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred -------HHHHHHHHHHHhhhhc-cCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 2232333324444443 35566778999999999999999999999999999999999999887
No 166
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.05 E-value=1.9e-08 Score=91.65 Aligned_cols=187 Identities=13% Similarity=0.112 Sum_probs=120.6
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHH-HhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCC
Q 019756 88 EARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFE-KAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGR 163 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~gr 163 (336)
+.++++..+.+....+++..+.. -.+.+.+......+-. ++|++.. +.....++.+++|++..|++.||+|.
T Consensus 242 ~~t~k~i~~~~~i~~FLiA~~~~----~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~ 317 (438)
T COG2270 242 KSTFKEIRGRKNLVLFLIARFFY----IDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGS 317 (438)
T ss_pred HHHHHHHhcccchHHHHHHHHHH----HhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34556666555554444433222 2234444444444433 7888776 66677888999999999999999999
Q ss_pred ceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcC
Q 019756 164 KPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIG 243 (336)
Q Consensus 164 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (336)
|+++++ +.+...+.++..... +. +..- .......+.+..+
T Consensus 318 k~vl~~----------------------------~lvi~~~~~~~~~~~----~~----~~~f----~i~gll~g~s~G~ 357 (438)
T COG2270 318 KPVLMI----------------------------GLVILSIAALYLIFL----EG----ELDF----WILGLLVGTSLGG 357 (438)
T ss_pred ceeehH----------------------------HHHHHHHHHHHHHHc----cc----cHHH----HHHHHHHHHhcch
Confidence 998888 655555544443321 11 0111 1222223333345
Q ss_pred ccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHHHHHHhhccCCCCC
Q 019756 244 LAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTVLFVAKIVPETKGR 319 (336)
Q Consensus 244 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~ 319 (336)
.....-++..++.|+++-++..|+++..++...+++|...+.+.+ .+.+..+....++..++.+ .+..+|+.+++
T Consensus 358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~-~L~~v~~~~~~ 434 (438)
T COG2270 358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL-LLLRVKVPGRR 434 (438)
T ss_pred HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh-hEEeecCCCCc
Confidence 566778999999999999999999999999999999999999888 3444445555555444444 34445555444
No 167
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.04 E-value=1.8e-09 Score=104.67 Aligned_cols=137 Identities=19% Similarity=0.174 Sum_probs=114.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
.......++..+|.++.|.++||+|||++++. +++..+++.+..+++
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~----------------------------~~~~~~i~~~~~a~a----- 168 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLV----------------------------SLLLFIIFGILTAFA----- 168 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHH----------------------------HHHHHHHHHHHHHHh-----
Confidence 67777888999999999999999999999999 888888888666643
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhH
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQWSSAGTFFI 297 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 297 (336)
.++...+...++.+++..+...+.+.+.+|+++++.|+.+..+ ....+.++.+.+...+++.. +|++.+++
T Consensus 169 -------~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-~Wr~~~~~ 239 (521)
T KOG0255|consen 169 -------PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-DWRWLFWI 239 (521)
T ss_pred -------CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-hHHHHHHH
Confidence 4456667777788888888888899999999999999999999 88889999999888888777 78888888
Q ss_pred HHHHHHHHHHHHHhhccCCC
Q 019756 298 FSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 298 ~~~~~~~~~i~~~~~~~et~ 317 (336)
......+..++ +++.||++
T Consensus 240 ~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 240 ISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred HHHHHHHHHHH-HHccCcCh
Confidence 88877776665 55556864
No 168
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.03 E-value=4.6e-09 Score=111.14 Aligned_cols=187 Identities=12% Similarity=-0.044 Sum_probs=110.5
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHH-HhCCCch----hHHHHHHHHHHHHHHHHHHhhhhcCCceee
Q 019756 93 NLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFE-KAGASGS----IGSRGIAIIQIPAVITSVLLMDKAGRKPLL 167 (336)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~----~~~~~~~~~~~~g~~~~~~l~dr~grr~~l 167 (336)
++++++.+++++...++..+........+..+..+... +.+.+.. +......+..++..+++|+++||+|||+++
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 45666666666555444444332222233333322222 2222211 344455666788889999999999999975
Q ss_pred eeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccch
Q 019756 168 MVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGI 247 (336)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (336)
.. ......+......... . ..++..++...++.+.......+.
T Consensus 86 ~~----------------------------~~~~~~~~~~~~~~~~-~--------~~s~~~l~~~~~l~gi~~a~~~p~ 128 (1140)
T PRK06814 86 KI----------------------------LKFAEIGIAALAIYGF-H--------LNSVPLLFAALFLMGIHSALFGPI 128 (1140)
T ss_pred HH----------------------------HHHHHHHHHHHHHHHH-H--------HhhHHHHHHHHHHHHHHHHhhchH
Confidence 33 1111111111111111 1 112333444455555555556788
Q ss_pred hhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 248 PFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 248 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
..+++.|++|++.|+.++|+.++...+|.+++|.+.+.+.+ .+|...| +..++..+.+++...++|+++
T Consensus 129 ~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 129 KYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred HHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCCC
Confidence 89999999999999999999999999999999999999988 6665555 433333333344445556553
No 169
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.03 E-value=4.7e-09 Score=111.11 Aligned_cols=115 Identities=15% Similarity=0.075 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
+...+..+..+++.+++|+++||+|||++++. +.++.++..++..+....
T Consensus 51 ~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~----------------------------~~~~~~~~~~~~~~~~~~-- 100 (1146)
T PRK08633 51 IVNALFLLPFLLLSSPAGFLADKFSKNRVIRI----------------------------VKLFEVGLTLLIVLAYYL-- 100 (1146)
T ss_pred HHHHHHHHHHHHHhhhHhhhcccccHHHHHHH----------------------------HHHHHHHHHHHHHHHHHH--
Confidence 44556667778889999999999999998887 655544444443332111
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQW 289 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 289 (336)
.+...++...++.+.......+...++++|++|++.|+.++|+......+|.++++.+.+.+.+.
T Consensus 101 -------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 101 -------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred -------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11223333334444444455677789999999999999999999999999999999999988764
No 170
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.03 E-value=1.3e-08 Score=95.16 Aligned_cols=157 Identities=10% Similarity=0.037 Sum_probs=112.1
Q ss_pred hHHHHHhHHHHHHHhCCCch----hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 118 ASAMAYYTSSIFEKAGASGS----IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
-....+-.|++.++.|++.. ........+..+..+..|+++||+|.|+++..
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l------------------------ 97 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVL------------------------ 97 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH------------------------
Confidence 45567778888889998776 45566667788999999999999999999988
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+.+...+..++.++. .+...+....++.+.+..+.. ....++..++|+++|+++.|+.+....
T Consensus 98 ----~~l~Wsl~t~L~~fa------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~ 160 (511)
T TIGR00806 98 ----QALSFVCVWLLLLLG------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVL 160 (511)
T ss_pred ----HHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 777777777776643 123333444444444443334 667999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhh--hHHHHHHHHHHHHHHhhccC
Q 019756 274 SCSWIVTYTFNFMMQWSSAGTF--FIFSGIGFFTVLFVAKIVPE 315 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~i~~~~~~~e 315 (336)
+|.++++.+.+.+...+|.... ...+....+.+.+..+++|.
T Consensus 161 vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 161 LGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKR 204 (511)
T ss_pred HHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999985555555433 22333333334444556663
No 171
>PRK09848 glucuronide transporter; Provisional
Probab=99.01 E-value=5.8e-09 Score=99.20 Aligned_cols=157 Identities=13% Similarity=0.040 Sum_probs=92.5
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCce
Q 019756 90 RLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKP 165 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~ 165 (336)
.++++++++......+..++..... .......|++.++ .|.+.. .......+..+++..+.+++.||+|+|+
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~ 295 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLIST----FAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN 295 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHH----HHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 4666777777665554444333322 2223334433332 343333 1222224556778889999999999999
Q ss_pred eeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCcc
Q 019756 166 LLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLA 245 (336)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (336)
.+.+ +.++..++...+... +. ...+...+...+ .+.......
T Consensus 296 ~~~~----------------------------g~~~~~i~~~~~~~~---~~------~~~~~~~~~~~l-~g~G~~~~~ 337 (448)
T PRK09848 296 TFLI----------------------------GALLGTCGYLLFFWV---SV------WSLPVALVALAI-ASIGQGVTM 337 (448)
T ss_pred HHHH----------------------------HHHHHHHHHHHHHHc---Cc------hhHHHHHHHHHH-HHHHHHHHH
Confidence 9888 766666665544321 10 112222222222 222222334
Q ss_pred chhhhhhcccCCcc-------chhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 246 GIPFVIMSEIFPIN-------VKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 246 ~~~~~~~~e~~p~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
+...++.+|..|.+ .+|...|+.+....+|..+++.+.+.+.+
T Consensus 338 ~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 338 TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677888877643 45888999999999999999999888776
No 172
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.01 E-value=8.4e-09 Score=96.41 Aligned_cols=162 Identities=14% Similarity=0.134 Sum_probs=106.9
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHhhhhcCCceeee
Q 019756 89 ARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSIGSRGIAIIQIPAVITSVLLMDKAGRKPLLM 168 (336)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~ 168 (336)
..+...++|+.++..++..++.......-.....||..+.+++................+++.++...+++|+|+|+++.
T Consensus 227 ~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~ 306 (467)
T COG2211 227 DSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFL 306 (467)
T ss_pred HHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH
Confidence 34556777777776666444444433333445556655554443333335566666777777999999999999999999
Q ss_pred eecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchh
Q 019756 169 VITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIP 248 (336)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (336)
. +.++.+++...+.+.. ..+...++...+..........+++
T Consensus 307 ~----------------------------~~~~~~i~~~~~~f~~----------~~~~~l~~~~~~i~~~g~~~~~~l~ 348 (467)
T COG2211 307 I----------------------------GLLLLAVGYLLLYFTP----------AGSVVLIVVALIIAGVGTGIANPLP 348 (467)
T ss_pred H----------------------------HHHHHHHHHHHHHhhc----------CcchHHHHHHHHHHHHHhhcccccc
Confidence 8 7777777666665431 1223333444344455555567889
Q ss_pred hhhhcccCC-----c--cchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 249 FVIMSEIFP-----I--NVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 249 ~~~~~e~~p-----~--~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
|++++|... + +.-|...|....+..+|.+++..+.++..+
T Consensus 349 wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 349 WAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred HHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999753 2 334666788888899999999988888776
No 173
>PRK10133 L-fucose transporter; Provisional
Probab=99.01 E-value=8.7e-09 Score=97.74 Aligned_cols=133 Identities=10% Similarity=-0.100 Sum_probs=94.2
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
......+.|.+.++++.+.. +......++..++.+..|.++||+|||+++..
T Consensus 42 ~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~------------------------- 96 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIIT------------------------- 96 (438)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH-------------------------
Confidence 56677788989888998876 66677888899999999999999999999998
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+..+.+++++++..... ..++..++....+.+.......+....++.|..|.+.|...+++.+....+
T Consensus 97 ---g~~~~~~~~~l~~~~~~---------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~ 164 (438)
T PRK10133 97 ---GLFLYALGAALFWPAAE---------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSF 164 (438)
T ss_pred ---HHHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHH
Confidence 88888877766532110 112222222223333322233444567777887777777789999999999
Q ss_pred HHHHHHHHHHHHH
Q 019756 275 CSWIVTYTFNFMM 287 (336)
Q Consensus 275 g~~~~~~~~~~l~ 287 (336)
|..+++.+...+.
T Consensus 165 G~~~g~~~g~~l~ 177 (438)
T PRK10133 165 GAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998876543
No 174
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.00 E-value=9.8e-09 Score=96.78 Aligned_cols=161 Identities=12% Similarity=0.065 Sum_probs=91.8
Q ss_pred HHHHhHHHH-HHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 120 AMAYYTSSI-FEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 120 ~~~~~~~~~-~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
....+.|.. .++.|.+.. .......+...++.++.|+++||+|||+.+..
T Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~-------------------------- 81 (420)
T PRK09528 28 SWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLW-------------------------- 81 (420)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH--------------------------
Confidence 334444444 444888876 66777788889999999999999999998766
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCC--ccchhhhhHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFP--INVKASAGSLVILICW 273 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~r~~~~~~~~~~~~ 273 (336)
+..+..+.............. .... ...........+.+.... .....++.+ .+.++...|.......
T Consensus 82 --~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~ 151 (420)
T PRK09528 82 --IISGLLVLFGPFFIYVFAPLL-----QYNI--LLGAIVGGIYLGFGFLAG-AGAIEAYIERVSRRSGFEYGRARMWGS 151 (420)
T ss_pred --HHHHHHHHHHHHHHHHHHHHH-----HHHH--HHHHHHHHHHhhhhhccc-hhhhhhHHHHHHhhccccchhhHHhhh
Confidence 433333322211110000000 0000 011111111111111111 111222222 2346777888889999
Q ss_pred HHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 274 SCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
+|..++|.+.+.+.+.++...|+..+++.++..++.+...+|.
T Consensus 152 ~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 152 LGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred HHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccc
Confidence 9999999999988887788888887777766665554444443
No 175
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.97 E-value=2.5e-08 Score=89.15 Aligned_cols=221 Identities=13% Similarity=0.108 Sum_probs=139.9
Q ss_pred HhhCcc-chHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhchhhH
Q 019756 11 FFGNVI-PWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRDHIEISQKHSEA 89 (336)
Q Consensus 11 ~l~~~~-gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (336)
-+..+. |||....+=+.++++.++.|+.-. .|. + ..+.+.+..
T Consensus 156 pla~~~~gW~~aL~~WAl~allAl~~WlPq~--~r~-----~-----------------------------~~~~~~~~~ 199 (395)
T COG2807 156 PLAQHSGGWRGALGFWALLALLALLIWLPQA--LRE-----Q-----------------------------AASIATKLV 199 (395)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHhhhc--ccc-----c-----------------------------ccccccccc
Confidence 333444 799999998888888887765432 210 0 001111122
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhc-CCce
Q 019756 90 RLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKA-GRKP 165 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~-grr~ 165 (336)
+-.++|+++..|...+...+. ...++....|+|.+..+.|.|.. .......+.+.+.++....+.+|. .+|+
T Consensus 200 ~~~~vw~~~~aW~vtLfmGlq----S~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~ 275 (395)
T COG2807 200 SVRKVWRSPLAWQVTLFMGLQ----SLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRP 275 (395)
T ss_pred cccccccCchhHHHHHHHHhh----HHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccch
Confidence 234567777777665543333 33467788899999999999876 667778888999999999999965 4666
Q ss_pred eeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCcc
Q 019756 166 LLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLA 245 (336)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (336)
..+. ....+.++.+.+.+. +. ...+.. + .+.+....+..
T Consensus 276 ~~~~----------------------------~~~~~l~G~~G~~~~---P~------~~~~lw-~---~llG~G~G~~F 314 (395)
T COG2807 276 LVVL----------------------------ALLLMLVGLVGLLLA---PG------QLPILW-A---LLLGLGQGGAF 314 (395)
T ss_pred HHHH----------------------------HHHHHHHHHHHHHHh---hh------hHHHHH-H---HHHhCccchHH
Confidence 6555 444444444444321 11 112222 1 22233333444
Q ss_pred chhhhhhcccC-CccchhhhhHHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHHHHHHhh
Q 019756 246 GIPFVIMSEIF-PINVKASAGSLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 246 ~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
+...+.+.+-. .+++.+.-.|+.+..+++-+..+|.++|.+.| .+|.......+...++..+..+..
T Consensus 315 ~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 315 PLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred HHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 55566666655 44566777889999999999999999999999 566666666666666665555444
No 176
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.96 E-value=1.3e-08 Score=97.46 Aligned_cols=115 Identities=9% Similarity=0.060 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhcc
Q 019756 139 GSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEV 218 (336)
Q Consensus 139 ~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (336)
......+..+++.++.++++||+|||+.+.+ +..+..++............
T Consensus 271 ~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~- 321 (473)
T PRK10429 271 YLSYAGAANLVTLILFPRLVKSLSRRILWAG----------------------------ASIFPVLSCGVLLLMGLAAP- 321 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH----------------------------HHHHHHHHHHHHHHHhccCc-
Confidence 3444557788888999999999999998877 65544444433322111111
Q ss_pred ccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCC-----c--cchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 219 KNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFP-----I--NVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-----~--~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
...+..++... +.+.......+..+++++|..+ + +..|...|.......+|..+++.+.+.+.+
T Consensus 322 -----~~~~~~~i~~~-l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 322 -----HNALLIVIAGI-LLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred -----hhHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222222 2222222334566788999855 3 334557788899999999999999998876
No 177
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.96 E-value=1.7e-08 Score=94.35 Aligned_cols=165 Identities=13% Similarity=0.020 Sum_probs=97.9
Q ss_pred hHHHHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 118 ASAMAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 118 ~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
......+.|.+. ++.|.+.. +......+...++.+..|+++||+|||+.++.
T Consensus 18 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~------------------------ 73 (396)
T TIGR00882 18 MSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLW------------------------ 73 (396)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH------------------------
Confidence 444444555544 45788775 66777888899999999999999999998876
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+....+++..........+.. ....+........+.+.......+....+..|..+ .++...|.....+.
T Consensus 74 ----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~ 143 (396)
T TIGR00882 74 ----IISGLLVLFAPFFIYVFGPLL----QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGC 143 (396)
T ss_pred ----HHHHHHHHHHHHHHHHhhhHH----HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcc
Confidence 444443322221111000000 00111111111222222222223444455555422 33456677888889
Q ss_pred HHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 274 SCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
+|..++|.+.+.+.+.+++..|++.+.+.++..++.+...||+
T Consensus 144 ~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 144 VGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred cHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999988778888889888887777766554444543
No 178
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.94 E-value=1.6e-08 Score=93.62 Aligned_cols=138 Identities=18% Similarity=0.158 Sum_probs=90.0
Q ss_pred HHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhH
Q 019756 147 QIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAH 226 (336)
Q Consensus 147 ~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (336)
..++.++.|+++||+|||+.+.. +.++..++..+.......... . ...
T Consensus 48 ~~i~~~~~G~l~dr~g~r~~l~~----------------------------~~~~~~~~~~~~~~~~~~~~~---~-~~~ 95 (394)
T TIGR00883 48 RPLGAIVFGHFGDRIGRKKTLVI----------------------------TLLMMGIGTLLIGLLPSYATI---G-IWA 95 (394)
T ss_pred hhhHHHHhhhhhhhhhhHHHHHH----------------------------HHHHHHHHHHHHhhCCChhhh---H-HHH
Confidence 35688999999999999999988 777777777766643211100 0 001
Q ss_pred HHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH---------hhcchhhhH
Q 019756 227 ILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ---------WSSAGTFFI 297 (336)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---------~~~~~~~~~ 297 (336)
...++....+.+.......+....++.|.+|+++|+...++......+|..+++.+...+.. .+|+..+.+
T Consensus 96 ~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 175 (394)
T TIGR00883 96 PILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLV 175 (394)
T ss_pred HHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHH
Confidence 11223333334444444456667899999999999999999999999999998887665432 466777776
Q ss_pred HHHHHHHHHHHHHhhccCCC
Q 019756 298 FSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 298 ~~~~~~~~~i~~~~~~~et~ 317 (336)
.+.+.+++.. .....||++
T Consensus 176 ~~~~~~~~~~-~~~~~~~~~ 194 (394)
T TIGR00883 176 SAVLVLIGLY-LRRNLEETP 194 (394)
T ss_pred HHHHHHHHHH-HHHhcCCCh
Confidence 6655544433 233445543
No 179
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.94 E-value=1.4e-08 Score=97.82 Aligned_cols=178 Identities=15% Similarity=0.110 Sum_probs=118.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeec
Q 019756 95 FQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVIT 171 (336)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~ 171 (336)
++++..+.+++...+..+...........+. .+..-|+. +......+..++.++.+|.+.||+.||++++.
T Consensus 7 lr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv----~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~-- 80 (524)
T PF05977_consen 7 LRNRNFRRLWIAQLISNLGDWMQTVALAWLV----TQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILIL-- 80 (524)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH--
Confidence 5667777776666555554443333434332 23333333 45555566677888999999999999999998
Q ss_pred ccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhh
Q 019756 172 TSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVI 251 (336)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (336)
+.+..++....+.+...... .+.+. ++.+.+..+.......|...++
T Consensus 81 --------------------------~~~~~~~~~~~L~~l~~~~~------~~~~~-Ll~~~fl~g~~~a~~~PA~~A~ 127 (524)
T PF05977_consen 81 --------------------------SQLLRALVALLLAVLAFFGL------LSPWL-LLILTFLLGIGSAFFNPAWQAI 127 (524)
T ss_pred --------------------------HHHHHHHHHHHHHHHHHhCc------CCHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 66666655555554332221 12222 2333333444444446777899
Q ss_pred hcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHh
Q 019756 252 MSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAK 311 (336)
Q Consensus 252 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~ 311 (336)
+.|+.|++.-..+.++.....++...++|.++|.+.. .+....|.+-++..++.+.....
T Consensus 128 ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~ 188 (524)
T PF05977_consen 128 IPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLR 188 (524)
T ss_pred HHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888 77777777766655554443333
No 180
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.93 E-value=3.8e-09 Score=101.30 Aligned_cols=175 Identities=16% Similarity=0.146 Sum_probs=116.0
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeee
Q 019756 92 LNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLM 168 (336)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~ 168 (336)
.++++++...... ........++.....++|.+.++.|.+.. ......++..+++.+..|++.|+...++..+
T Consensus 292 ~~ll~~~~fl~~~----~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~ 367 (509)
T KOG2504|consen 292 LSLLKDPKFLLLA----LSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVL 367 (509)
T ss_pred HHHHcCchHHHHH----HHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHH
Confidence 3556664433333 33333334567777888888888888776 6777888899999999999999988444333
Q ss_pred eecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchh
Q 019756 169 VITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIP 248 (336)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (336)
. -++.+..+++...+... ..+..++....+.++.........
T Consensus 368 ~--------------------------~~~ll~~gl~~~~~p~~------------~~~~~l~~~~~~fG~~~g~~~~l~ 409 (509)
T KOG2504|consen 368 F--------------------------LLTLLIAGLARLFLPFA------------TTYVGLIVFSILFGFCVGSFSSLT 409 (509)
T ss_pred H--------------------------HHHHHHHHHHHHHHHHh------------ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 00333333333333221 122333333333333333344455
Q ss_pred hhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHHHH
Q 019756 249 FVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTVLF 308 (336)
Q Consensus 249 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~i~ 308 (336)
...+.|+.+.+.-..+.|+...+..++.+++|.+.+.+.| .++...|+..+.+.+++...
T Consensus 410 ~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~ 471 (509)
T KOG2504|consen 410 PVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVL 471 (509)
T ss_pred HHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHH
Confidence 5788999999999999999999999999999999998888 44777777777777776654
No 181
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.93 E-value=3.2e-08 Score=92.72 Aligned_cols=167 Identities=13% Similarity=0.069 Sum_probs=110.7
Q ss_pred HHhhhhHHHHHhHHHHHHHhCCCchhHHHHHHH-HHHHHHHHHHHhhhhc-----CCce-eeeeeccccccccccccccc
Q 019756 113 QQFGGASAMAYYTSSIFEKAGASGSIGSRGIAI-IQIPAVITSVLLMDKA-----GRKP-LLMVITTSRTLFKMFDFVDQ 185 (336)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~~~l~dr~-----grr~-~l~~~~~~~~~~~~~~~~~~ 185 (336)
.+.........-+|.++++.|.+.+.......+ .-.+..+++|.++||+ |||+ .+..
T Consensus 10 ~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~---------------- 73 (402)
T PRK11902 10 ASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLL---------------- 73 (402)
T ss_pred HHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHH----------------
Confidence 333345566677888889999998732222111 1257789999999999 8876 4555
Q ss_pred ccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhh
Q 019756 186 RGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAG 265 (336)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 265 (336)
+..+.+++...+... +. ..+...+.....+.........+...+++.|.+|+++|+++.
T Consensus 74 ------------~~~~~~l~~~~l~~~---~~------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~ 132 (402)
T PRK11902 74 ------------TQVGLAASIAAMAFC---PP------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGA 132 (402)
T ss_pred ------------HHHHHHHHHHHHHhc---Cc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHH
Confidence 555555555544422 11 111222222222233444445566789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 266 SLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 266 ~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
++......+|..+++.+...+.+ .+|+..|++.+++.++..+. .++.||++
T Consensus 133 ~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~ 185 (402)
T PRK11902 133 AVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCc
Confidence 99999889999999998888877 38888998888877665543 44567664
No 182
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.91 E-value=4.4e-08 Score=93.06 Aligned_cols=183 Identities=15% Similarity=0.093 Sum_probs=112.1
Q ss_pred HHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhh----hcCCceeeeeecccccccc
Q 019756 106 GVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMD----KAGRKPLLMVITTSRTLFK 178 (336)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~d----r~grr~~l~~~~~~~~~~~ 178 (336)
........+++ +.....+.+.++++.|.+.. .......+...+..++.|+++| |+|||+.++..
T Consensus 9 ~~~~~~Giq~~-~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~-------- 79 (477)
T TIGR01301 9 VASVAAGVQFG-WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAA-------- 79 (477)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHH--------
Confidence 33344444444 44555556667788898876 5555666777888889999999 59999987761
Q ss_pred cccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc-----cccccchh-HHHHHHHHHHHHHHhhcCccchhhhhh
Q 019756 179 MFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE-----VKNMNDAA-HILVLVGFMGCSAFNSIGLAGIPFVIM 252 (336)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (336)
+.....++..++........ ....+... .+..++++.+.....+. ..+...+++
T Consensus 80 -------------------g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~-~~~p~rALi 139 (477)
T TIGR01301 80 -------------------GAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNM-LQGPCRAFL 139 (477)
T ss_pred -------------------HHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHhc
Confidence 24444444444433211100 00000011 12222333232223222 234456899
Q ss_pred cccCCccch--hhhhHHHHHHHHHHHHHHHHHHHHHH--H--------------hhcchhhhHHHHHHHHHHHHHHhhcc
Q 019756 253 SEIFPINVK--ASAGSLVILICWSCSWIVTYTFNFMM--Q--------------WSSAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 253 ~e~~p~~~r--~~~~~~~~~~~~~g~~~~~~~~~~l~--~--------------~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
+|++|+++| +.+.++......+|+.+++.+.+... + .+....|.+.+++.+++.++..+..+
T Consensus 140 aDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~ 219 (477)
T TIGR01301 140 ADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVK 219 (477)
T ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 999998866 57889899999999999999887642 1 13455677877878888887888888
Q ss_pred CCC
Q 019756 315 ETK 317 (336)
Q Consensus 315 et~ 317 (336)
|..
T Consensus 220 E~~ 222 (477)
T TIGR01301 220 ENP 222 (477)
T ss_pred ccC
Confidence 864
No 183
>PRK11462 putative transporter; Provisional
Probab=98.90 E-value=6.1e-08 Score=92.54 Aligned_cols=160 Identities=12% Similarity=0.027 Sum_probs=85.2
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHhhhhcCCceeeee
Q 019756 90 RLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSIGSRGIAIIQIPAVITSVLLMDKAGRKPLLMV 169 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~ 169 (336)
.++..++++.++......++.............+|..+..+..+ ..........+..+++.+++++++||+|+|+....
T Consensus 220 ~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~ 298 (460)
T PRK11462 220 DLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWW 298 (460)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 45566677766655444333333333223344455544432211 01134455667788899999999999999987654
Q ss_pred ecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhh
Q 019756 170 ITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPF 249 (336)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (336)
+.....+...++. ..+. .......+..... +.......+..+
T Consensus 299 ----------------------------~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~l~-g~~~~~~~~l~~ 340 (460)
T PRK11462 299 ----------------------------TNALLAVISLAMF---FVPM------QASITMFVFIFVI-GVLHQLVTPIQW 340 (460)
T ss_pred ----------------------------HHHHHHHHHHHHH---Hhch------hHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 3332222222211 1111 1111112222222 222223345556
Q ss_pred hhhcccCC-----ccchhhh--hHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 250 VIMSEIFP-----INVKASA--GSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 250 ~~~~e~~p-----~~~r~~~--~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
++++|..+ +.+|..+ .+......++|..+++.+.+.+.+
T Consensus 341 ~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 341 VMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777655 2345444 466668899999999999888776
No 184
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.90 E-value=6.3e-08 Score=90.50 Aligned_cols=158 Identities=13% Similarity=-0.008 Sum_probs=93.8
Q ss_pred HHHhHHH-HHHHhCCCchhHHHH---HHH-HHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 121 MAYYTSS-IFEKAGASGSIGSRG---IAI-IQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 121 ~~~~~~~-~~~~~g~~~~~~~~~---~~~-~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
...+.+. +.++.|.+....... ..+ ....+.+.+++ .||+|||+.++..
T Consensus 34 ~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~------------------------- 87 (393)
T PRK15011 34 QTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVF------------------------- 87 (393)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHH-------------------------
Confidence 3343444 556778877632222 223 34455555666 9999999875430
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchh--hhhHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKA--SAGSLVILICW 273 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~--~~~~~~~~~~~ 273 (336)
+.+..++.+...+.. ...+..++......+. .....+....+..|..|++.|. ...++.+....
T Consensus 88 --~~~~~~~~~~~~~~~-----------~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (393)
T PRK15011 88 --CCLLGVLACTLFAWN-----------RNYFVLLFVGVFLSSF-GSTANPQMFALAREHADKTGREAVMFSSFLRAQVS 153 (393)
T ss_pred --HHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Confidence 333333333333321 1112222222222222 2234455566777766665553 33477788889
Q ss_pred HHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 274 SCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
+|..++|.+.+.+.+ .+|+..|++.+...++..+..+++.||.++
T Consensus 154 lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 199 (393)
T PRK15011 154 LAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRK 199 (393)
T ss_pred HHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence 999999999999987 799999998888887777776777787643
No 185
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.90 E-value=1.1e-07 Score=91.43 Aligned_cols=144 Identities=8% Similarity=0.006 Sum_probs=88.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCcee-------eeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHH
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPL-------LMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIG 210 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~-------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (336)
.......+..++.+.+.+++.||.+||+. +.+ |.++.+++...++
T Consensus 313 ~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~----------------------------G~~l~~~~~~~~~ 364 (489)
T PRK10207 313 SFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTL----------------------------GMFLCSLGFLTAA 364 (489)
T ss_pred HHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHH----------------------------HHHHHHHHHHHHH
Confidence 34444445566777778899999999874 444 5555555544433
Q ss_pred HHHh-hhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-
Q 019756 211 LSFY-LKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ- 288 (336)
Q Consensus 211 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~- 288 (336)
.... ..... ...+.+ .++....+.+.......+....++.+..|++.++.++|+.+....+|+.++..+.+....
T Consensus 365 ~~~~~~~~~~--~~~s~~-~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~ 441 (489)
T PRK10207 365 AAGMWFADAQ--GLTSPW-FIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVP 441 (489)
T ss_pred HHHHhhcCCC--CccCHH-HHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2111 11111 112223 233444444555555567778888999999999999999999999999998888754421
Q ss_pred ----------hhcchhhhHHHHHHHHHHHHHHhh
Q 019756 289 ----------WSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 289 ----------~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
..+.+.|...+..++++.++.+..
T Consensus 442 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~ 475 (489)
T PRK10207 442 DNITDPLETLPVYTNVFGKIGLVTLGVAVVMALM 475 (489)
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 123455666666666555554443
No 186
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.90 E-value=4.6e-08 Score=92.28 Aligned_cols=141 Identities=17% Similarity=0.133 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
.......+++++|++..++++||+|||..+.+ +.+...++..++......+
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~----------------------------~~~l~~~~~~~~~~s~~~~- 114 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLL----------------------------SNLLAVLAALLMGLSKSAP- 114 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH----------------------------HHHHHHHHHHHHHHHHHhh-
Confidence 45667778999999999999999999988877 7676666666666554332
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHH-HHHH--hhcchh
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFN-FMMQ--WSSAGT 294 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~-~l~~--~~~~~~ 294 (336)
.....+++..+.+...+. .......|+.|..|++.||....+......+|..++..+.. .+.. ..|...
T Consensus 115 -------~~e~li~GR~i~Gl~~gl-~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l 186 (485)
T KOG0569|consen 115 -------SFEMLILGRLIVGLACGL-STGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYL 186 (485)
T ss_pred -------hHHHHHHHHHHHHHHhHH-HHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHH
Confidence 222333444433333333 34455789999999999999999999999999998866553 3333 334444
Q ss_pred hhHHHHHHHHHHHHHHhhccCC
Q 019756 295 FFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 295 ~~~~~~~~~~~~i~~~~~~~et 316 (336)
+....+.+++..+ ...+.||+
T Consensus 187 ~~~~~i~~~~~l~-~l~~~PES 207 (485)
T KOG0569|consen 187 LAFPLIPALLQLA-LLPFLPES 207 (485)
T ss_pred HHHHHHHHHHHHH-HHhcCCCC
Confidence 4444444444433 55667887
No 187
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.87 E-value=1e-07 Score=86.53 Aligned_cols=170 Identities=14% Similarity=0.103 Sum_probs=109.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-hCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCce
Q 019756 90 RLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEK-AGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKP 165 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~ 165 (336)
...+++++++.+.-.+..+++... -.....+++.+..+ .|.+.. ...+....+.++|.+++.++..|+...|
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~----Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k 303 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGA----EVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEK 303 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhH----HHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 567888888888877766665554 44556666666666 565544 5566677788999999999999999888
Q ss_pred eeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCcc
Q 019756 166 LLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLA 245 (336)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (336)
.+.+ .++...+.++..++. .....+..... .+.+.....
T Consensus 304 ~Laf----------------------------~a~~~ill~~~~~l~------------~g~v~~~~l~~-ig~F~simf 342 (422)
T COG0738 304 YLAF----------------------------YALIAILLLLAVALI------------GGVVALYALFL-IGLFNSIMF 342 (422)
T ss_pred HHHH----------------------------HHHHHHHHHHHHHHh------------cChHHHHHHHH-HHHHhHHHH
Confidence 8777 444444444443322 11222233333 334444456
Q ss_pred chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHH
Q 019756 246 GIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTV 306 (336)
Q Consensus 246 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 306 (336)
|..++...+..| + -....|.....+-+|+++.|.+.|++.| .+....+.....+|.+-+
T Consensus 343 PTIfslal~~l~-~-~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 343 PTIFSLALKNLG-E-HTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHhccC-c-cccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 777888888888 3 3444455556677899999999999999 555555554444444443
No 188
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.85 E-value=3.4e-08 Score=90.84 Aligned_cols=145 Identities=10% Similarity=-0.021 Sum_probs=97.1
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
........|.+.+++|.+.. +......++..++.+..|+++||+|||+.+..
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~------------------------- 70 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAA------------------------- 70 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHH-------------------------
Confidence 34456678889999998876 56677778889999999999999999998877
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+.+...++.... .. .+.+..++.....+.+.+ ...+....++.|.+| ++|+++.++.+....+
T Consensus 71 ---~~~~~~~~~~~~-~~-----------~~~~~l~~~~~~~g~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 133 (355)
T TIGR00896 71 ---GLLLIAAGILIR-SA-----------PGTALLFAGTALIGVGIA-IINVLLPSLIKRDFP-QRVGLMTGLYSMALMG 133 (355)
T ss_pred ---HHHHHHHHHHHH-Hh-----------ccHHHHHHHHHHHHHHHH-HHhccchHHHHHhCc-chhhHHHHHHHHHHHH
Confidence 655554444332 10 111222222222222222 223344567788887 5799999999999999
Q ss_pred HHHHHHHHHHHHHHh---hcchhhhHHHHHHHH
Q 019756 275 CSWIVTYTFNFMMQW---SSAGTFFIFSGIGFF 304 (336)
Q Consensus 275 g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~ 304 (336)
|..+++.+.+.+.+. +|+..+...+++.++
T Consensus 134 g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 134 GAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 999999998887762 266666655554433
No 189
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.84 E-value=2.4e-08 Score=96.67 Aligned_cols=139 Identities=18% Similarity=0.167 Sum_probs=104.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhh
Q 019756 137 SIGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLK 216 (336)
Q Consensus 137 ~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (336)
++......++..+|.++.|+++|++|||+.+++ +.+...++.++.+.+.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~----------------------------~~~~~~iG~ii~~~a~--- 140 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLL----------------------------AVVLFLIGAIIIALAP--- 140 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH----------------------------HHHHHHHHHHHHHHhh---
Confidence 377888889999999999999999999999999 8888888888888652
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-h--hcch
Q 019756 217 EVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-W--SSAG 293 (336)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~--~~~~ 293 (336)
+.....++..+ .+....+...+...|.+|+.|++.||...++......+|..++ ++.+...+ . +|+.
T Consensus 141 --------~~~~l~~GR~l-~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~ 210 (513)
T KOG0254|consen 141 --------SWYQLIVGRIL-TGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRI 210 (513)
T ss_pred --------hHHHHHHHHHH-hccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHH
Confidence 22333344443 4444444456667999999999999999999999988887777 44444444 2 6776
Q ss_pred hhhHHHHHHHHHHHHHHhhccCCC
Q 019756 294 TFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 294 ~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
.+.+..+.+++..+. .++.||+.
T Consensus 211 ~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 211 PLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred HHHHHHHHHHHHHHH-HHhCCCCh
Confidence 677766666666665 77788873
No 190
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.83 E-value=4.1e-09 Score=95.02 Aligned_cols=142 Identities=11% Similarity=0.068 Sum_probs=119.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
+......+.+++...+.|.++||+|+|..+++ |.+.+..+.++.++.
T Consensus 110 ~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~----------------------------Gl~vmf~sTilFafg----- 156 (464)
T KOG3764|consen 110 LLFASKALVQLLVNPFFGNLIDRIGYKIPMVA----------------------------GLFVMFLSTILFAFG----- 156 (464)
T ss_pred HHHHHHHHHHHHhcccchhhHHHhccccHHHH----------------------------HHHHHHHHHHHHHHc-----
Confidence 56666778889999999999999999999999 888888888888753
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccc-hhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhh
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINV-KASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTF 295 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~ 295 (336)
..+.+++......+..+........++++|.||.+. |++++|+.-.+..+|-.++|..++.+++ .|...+|
T Consensus 157 -------~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPF 229 (464)
T KOG3764|consen 157 -------NSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPF 229 (464)
T ss_pred -------chhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcH
Confidence 233455666666777766667777899999999875 7999999999999999999999999999 8999999
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCC
Q 019756 296 FIFSGIGFFTVLFVAKIVPETKGR 319 (336)
Q Consensus 296 ~~~~~~~~~~~i~~~~~~~et~~~ 319 (336)
.+.++++++...+.++.++.++.+
T Consensus 230 lVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 230 LVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred HHHHHHHHHHHHHHHheeCccccC
Confidence 999999999988877776555444
No 191
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.77 E-value=1.6e-06 Score=83.11 Aligned_cols=114 Identities=11% Similarity=0.084 Sum_probs=75.9
Q ss_pred hhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHH
Q 019756 198 SACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSW 277 (336)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 277 (336)
|.++.+++...+++.....+.. . ..+...++....+.+.......|....+++|..|++.||+.+|+......+|..
T Consensus 355 G~~l~~~~~~~~~~~~~~~~~~--~-~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~ 431 (475)
T TIGR00924 355 GMLFCGASFLTFAASIWFADAG--G-LTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSL 431 (475)
T ss_pred HHHHHHHHHHHHHHHHhhcCCC--C-ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 5666666665555432221111 1 123333444444555556666788899999999999999999999999999999
Q ss_pred HHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhcc
Q 019756 278 IVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 278 ~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
+++.+.....+ .++.+.+...+...++..++.++..|
T Consensus 432 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 432 LGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99888876655 45666677777666666665555433
No 192
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.72 E-value=1.2e-06 Score=84.84 Aligned_cols=111 Identities=18% Similarity=0.086 Sum_probs=67.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeee-eecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhh
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLM-VITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLK 216 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (336)
+.....+.+...|.++.+.+..|++|-|..+ + +...+.+++..++.. .+
T Consensus 353 ~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~----------------------------~~~~~ta~~Gama~~--~~ 402 (599)
T PF06609_consen 353 WISSPVGFGSCAGAVILGLLFSKIRHIKWQLIF----------------------------GSVLMTAFCGAMAAV--RP 402 (599)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHccchhHHHHH----------------------------HHHHHHHHHHHHHHc--cC
Confidence 5566777788888888999999888765543 4 555555444444321 11
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 019756 217 EVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFM 286 (336)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 286 (336)
+ +.... +++..+.+.+..+......+...-..|++.-|++.|+...+..+|+.++..++..+
T Consensus 403 ~----n~~~~----i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 403 D----NKNAA----IAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred C----CcchH----HHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 1 11111 12222222222222233345555567999999999999999999998888876543
No 193
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.72 E-value=4.3e-07 Score=84.56 Aligned_cols=148 Identities=10% Similarity=0.014 Sum_probs=93.4
Q ss_pred HhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccc
Q 019756 114 QFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYEN 190 (336)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (336)
.+........++|.+.++.|.+.. .......+...++.++.+.++||+|||.....
T Consensus 16 ~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~--------------------- 74 (382)
T TIGR00902 16 YFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALR--------------------- 74 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH---------------------
Confidence 333455667778888899998876 44445566777888899999999998643211
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHH
Q 019756 191 GYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVIL 270 (336)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 270 (336)
...++..+......... ...+..++...... .+.....+...++..|. .++|+++.|....
T Consensus 75 ----------~~~~~~~l~~~~~~~~~------~~~~~l~~~~~l~~-~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~ 135 (382)
T TIGR00902 75 ----------LLALASAIFAAAFSAGA------HNAWLLFIAIGLFA-LFFSAGMPIGDALANTW--QKQFGLDYGKVRL 135 (382)
T ss_pred ----------HHHHHHHHHHHHHHHhh------hhHHHHHHHHHHHH-HHHccchhHHHHHHHHH--HHHcCCCccHHHH
Confidence 11111111111111100 11233333333333 33333456666666553 5678999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-hhcchhhhHHHHH
Q 019756 271 ICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGI 301 (336)
Q Consensus 271 ~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~ 301 (336)
.+.+|..++|.+.+.+.+ .+|+..+.+.+..
T Consensus 136 ~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 136 IGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 999999999999999988 7888888776554
No 194
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.70 E-value=1.5e-07 Score=81.64 Aligned_cols=163 Identities=16% Similarity=0.073 Sum_probs=103.5
Q ss_pred hhhhHHHHHhHHHHHHHhCCCchh---HHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccccccccccccccccccc
Q 019756 115 FGGASAMAYYTSSIFEKAGASGSI---GSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENG 191 (336)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (336)
.+..+.+..|.|.+.+++|.+.+. ......++..+ .+.+|.+.|++|.+.++.+
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~i---------------------- 71 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLI---------------------- 71 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHH----------------------
Confidence 344678899999999999998873 33444555554 4788999999999999888
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCc-cchhhhhhcccCCccchhhhhHHHHH
Q 019756 192 YQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGL-AGIPFVIMSEIFPINVKASAGSLVIL 270 (336)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~~~~~~ 270 (336)
|.+...++...+.......-. ..+... +.+..+.+..+.++ .........+.||. .||++.|+.-.
T Consensus 72 ------G~~~~~~GY~~~~l~~~~~i~-----~~~~~~-~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~ 138 (250)
T PF06813_consen 72 ------GAVLGFVGYGLLWLAVSGRIP-----SLPVWL-MCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKG 138 (250)
T ss_pred ------HHHHHHHHHHHHHHHHhCccC-----ccchHH-HHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhH
Confidence 888888887776544321111 112222 22222223223222 23334555688985 79999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhc
Q 019756 271 ICWSCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIV 313 (336)
Q Consensus 271 ~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~ 313 (336)
...+++.+-..+...+.+.+....+...+....+..+....++
T Consensus 139 ~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 139 FFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred HHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhe
Confidence 9999988888887776665444444444444444434344443
No 195
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=8.8e-08 Score=90.90 Aligned_cols=140 Identities=14% Similarity=0.075 Sum_probs=113.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
........+.+++.+.++++.||+|-|+++.. +.++.+++.+++......
T Consensus 77 ~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~----------------------------~~~~sa~~t~l~P~aa~~-- 126 (466)
T KOG2532|consen 77 LIFSSFFWGYILGQIPGGYLADKFGARRVFFI----------------------------SGLISALLTLLTPLAASI-- 126 (466)
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHcCchHHHHH----------------------------HHHHHHHHHHHHHHHHHh--
Confidence 66777888999999999999999999999988 777777777777654321
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH--hhcchhh
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ--WSSAGTF 295 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~ 295 (336)
..+ .++...++.+.......|....+.+.+.|+++|++..++.....++|.+++-.+.+.+.+ .||...|
T Consensus 127 -------~~~-~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sif 198 (466)
T KOG2532|consen 127 -------GFY-LLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIF 198 (466)
T ss_pred -------cch-hhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHH
Confidence 112 345555556655555567778999999999999999999999999999999999998888 6999999
Q ss_pred hHHHHHHHHHHHHHHhhccC
Q 019756 296 FIFSGIGFFTVLFVAKIVPE 315 (336)
Q Consensus 296 ~~~~~~~~~~~i~~~~~~~e 315 (336)
++.++++++..++...+..|
T Consensus 199 Y~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 199 YVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 99999998888766555543
No 196
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.69 E-value=6.5e-07 Score=86.41 Aligned_cols=111 Identities=10% Similarity=0.090 Sum_probs=67.0
Q ss_pred hhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHH
Q 019756 198 SACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSW 277 (336)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 277 (336)
|.++.+++...+.......+.. ...+.+ ..+....+.+.......|....++.+..|++.||+.+|+......+|+.
T Consensus 356 G~~l~~l~f~~l~~~~~~~~~~--~~vs~~-~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~ 432 (500)
T PRK09584 356 GMVLCSGAFLVLPLGAKFANDA--GIVSVN-WLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAAL 432 (500)
T ss_pred HHHHHHHHHHHHHHHHHhcCCC--CccCHH-HHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666655432221111 112223 4444555556666667788889999999999999999988877767777
Q ss_pred HHHHHHHHHH----------H-hhcchhhhHHHHHHHHHHHHHHh
Q 019756 278 IVTYTFNFMM----------Q-WSSAGTFFIFSGIGFFTVLFVAK 311 (336)
Q Consensus 278 ~~~~~~~~l~----------~-~~~~~~~~~~~~~~~~~~i~~~~ 311 (336)
++..+.+... . .++...|...++.+++.+++.+.
T Consensus 433 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 433 IAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6666654221 0 12445666666665555444443
No 197
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.68 E-value=1.9e-07 Score=89.06 Aligned_cols=141 Identities=11% Similarity=-0.092 Sum_probs=110.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
.......++.+++.+.++.+.||++-.+.+ ..+.++..++++..+.
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l--------------------------------~~~~~~w~~~~~~~~~-- 130 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLSKGL--------------------------------SVSGILWGLFGFLTAA-- 130 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChHHHH--------------------------------HHHHHHHHHHHHHHHH--
Confidence 677888899999999999999999933333 3334444333322221
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH-------Hhh
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMM-------QWS 290 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-------~~~ 290 (336)
.++...++++.++.+.+..+..|....+++.+|.+++|+..+|+.+..+.+|+++++.+...+. ..+
T Consensus 131 ------~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~g 204 (495)
T KOG2533|consen 131 ------VHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAG 204 (495)
T ss_pred ------HhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCC
Confidence 2234556777778888888888888899999999999999999999999999999999988743 278
Q ss_pred cchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 291 SAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
|++.|++.+++.++..+++++++|+...
T Consensus 205 W~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 205 WRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred ceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999988888887544
No 198
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.67 E-value=6.8e-07 Score=83.17 Aligned_cols=158 Identities=9% Similarity=0.000 Sum_probs=96.4
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
......++|.+.++.|.+.. .......+...++.++.+.++||+|||+...-
T Consensus 20 ~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~------------------------- 74 (382)
T PRK11128 20 YGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALR------------------------- 74 (382)
T ss_pred HHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHH-------------------------
Confidence 45566677778888888876 55556667778888999999999999532111
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
.. . +............. .+.+..++ .....+.......+...++..+. .+.|+.+.+.....+.+
T Consensus 75 ---~~--~-~~~~~~~~~~~~~~------~~~~~l~i-~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~l 139 (382)
T PRK11128 75 ---LL--A-LLTLLFAVAFWFGA------HSFWLLFV-AIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSI 139 (382)
T ss_pred ---HH--H-HHHHHHHHHHHHhc------ccHHHHHH-HHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHH
Confidence 00 0 01111111111110 11222222 23323333334455555666665 35688889999999999
Q ss_pred HHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 275 CSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 275 g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
|..++|.+.+.+.+ .+|+..|++.++..++..+ ..+..||+
T Consensus 140 g~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~ 181 (382)
T PRK11128 140 AFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLLRPTI 181 (382)
T ss_pred HHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHccCCC
Confidence 99999999999988 6888888877765444433 33344554
No 199
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.61 E-value=4.5e-07 Score=85.74 Aligned_cols=161 Identities=11% Similarity=0.027 Sum_probs=97.2
Q ss_pred HhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhh----cCCcee-eeeecccccccccccccccccccccchh
Q 019756 123 YYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDK----AGRKPL-LMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 123 ~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr----~grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
+..+++.++.|.++. .......+...+..++.|+++|| +|||+. ++.
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~------------------------- 75 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLI------------------------- 75 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHH-------------------------
Confidence 344445556788877 44555557788888999999997 677554 444
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccC-CccchhhhhHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIF-PINVKASAGSLVILICW 273 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~ 273 (336)
+....+++.+++.. .++... ....+...+....+..+.+. ......++..|+. ++++|++..++......
T Consensus 76 ---~~~~~~i~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~ 146 (437)
T TIGR00792 76 ---GAIPFSIVLVLLFT---TPDFSA--TGKLVYAYITYILLGLFYSF-VNIPYWSLVPAITLDPRERESLSTFRRFGAT 146 (437)
T ss_pred ---hHHHHHHHHHHHHh---CCCCCc--chHHHHHHHHHHHHHHHHHh-hcccHhhCcccccCCHHHHHHHHHHHHHHHH
Confidence 55555554444432 111110 01111222222223333332 2233357788887 56889999999998888
Q ss_pred HHHHHHHHHHHHHHH--------hhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 274 SCSWIVTYTFNFMMQ--------WSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
+|+.+++.+.+.+.. .+|...+.+.+++.++..++..+..||++
T Consensus 147 ~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 147 LGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 888887776655543 35666777777777777766666777754
No 200
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.60 E-value=1.6e-06 Score=80.78 Aligned_cols=171 Identities=11% Similarity=0.006 Sum_probs=101.9
Q ss_pred HHHHHHhhhhHHHHHhHHHHHHHhCCCchhHHH-----HHHHHHHHHHHHH-HHhhhhcCCceeeeeecccccccccccc
Q 019756 109 LMLLQQFGGASAMAYYTSSIFEKAGASGSIGSR-----GIAIIQIPAVITS-VLLMDKAGRKPLLMVITTSRTLFKMFDF 182 (336)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~g~~~~-~~l~dr~grr~~l~~~~~~~~~~~~~~~ 182 (336)
...+.+.........+.|.++++.|.+...... ...+..++...+. ++..||.|||+..++
T Consensus 8 ~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~------------- 74 (390)
T TIGR02718 8 LLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVL------------- 74 (390)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHH-------------
Confidence 334445445667778899999999988873222 3345555555555 447888999988655
Q ss_pred cccccccccchhhhhhhhhh-HHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccch
Q 019756 183 VDQRGYENGYQYLQISACGM-AFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVK 261 (336)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 261 (336)
.+... ..+...+.. .... .......+.......+......+....+..|..+++.+
T Consensus 75 ---------------~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~ 131 (390)
T TIGR02718 75 ---------------PMQCLVSACLASLAL--VGPD------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTL 131 (390)
T ss_pred ---------------HHHHHHHHHHHHHHc--CCcc------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 32111 111222211 1110 11111112222223333333334445567777777777
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccC
Q 019756 262 ASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPE 315 (336)
Q Consensus 262 ~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~e 315 (336)
+...+.......+|..+++...+.+.+ .+|+.+|++.+++.++..+..++..|+
T Consensus 132 ~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 132 AKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 777777777778888888888888777 789999999988887766665554444
No 201
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.57 E-value=5.9e-07 Score=77.82 Aligned_cols=130 Identities=12% Similarity=-0.025 Sum_probs=84.8
Q ss_pred hHHHHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccch
Q 019756 118 ASAMAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 118 ~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
...+....|.++ +.+|.++. ...+.......+.+.+.|.++||+||+-..+.|
T Consensus 280 ~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~----------------------- 336 (459)
T KOG4686|consen 280 WFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVAS----------------------- 336 (459)
T ss_pred HHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHH-----------------------
Confidence 344444455554 45788765 344445556677788999999999999877762
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
+++...++...+.+.. .+++..+..+ +..++.- ....|..++-+.|.+.-|++.|..+.+.+
T Consensus 337 ----a~~~tl~~H~~l~Ft~----------lsPy~~m~~l---GLsysll-AcslWP~va~~vpE~qLGTaygf~qsIqN 398 (459)
T KOG4686|consen 337 ----ACILTLLGHSGLFFTF----------LSPYTSMTFL---GLSYSLL-ACSLWPCVASLVPEEQLGTAYGFIQSIQN 398 (459)
T ss_pred ----HHHHHHHHhhhHHhhh----------ccHHHHHHHH---hhhHHHH-HHHHhhhhhhhCCHHHhcchHHHHHHHHh
Confidence 3444444444444322 2233322222 2222211 11236677778888999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 019756 274 SCSWIVTYTFNFMMQ 288 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~ 288 (336)
+|-.+.|++.+.+.+
T Consensus 399 Lgla~i~Iiag~i~d 413 (459)
T KOG4686|consen 399 LGLAFIPIIAGFIAD 413 (459)
T ss_pred hhhhHHhhhhheeec
Confidence 999999999999988
No 202
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.56 E-value=8.3e-10 Score=104.90 Aligned_cols=141 Identities=21% Similarity=0.183 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
+......++..+|++++|+++||+|||+.+++ +..+..++.++.++....
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~----------------------------~~~~~~i~~~~~~~~~~~-- 99 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRKPALII----------------------------SALLMIIGSILIAFAPSY-- 99 (451)
T ss_pred HHHHHHHhhhcccccccccccccccccccccc----------------------------cccccccccccccccccc--
Confidence 45677778899999999999999999999999 888888888877754211
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH----hhcch
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ----WSSAG 293 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----~~~~~ 293 (336)
.+...+.....+.++...+..+....++.|..|++.|+...++......+|..++..+.....+ ..|+.
T Consensus 100 -------~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~ 172 (451)
T PF00083_consen 100 -------NNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRI 172 (451)
T ss_pred -------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1233334444445555555567778999999999999999999999888888877776544433 34666
Q ss_pred hhhHHHHHHHHHHHHHHhhccCC
Q 019756 294 TFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 294 ~~~~~~~~~~~~~i~~~~~~~et 316 (336)
.+.+.++..++..+ ...++||+
T Consensus 173 ~~~~~~~~~l~~~~-~~~~~pES 194 (451)
T PF00083_consen 173 LLIFGAIPSLLVLL-LRFFLPES 194 (451)
T ss_pred cccccccccccccc-cccccccc
Confidence 66666666655444 44667887
No 203
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.55 E-value=5.6e-08 Score=89.49 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=32.9
Q ss_pred hhhhcccCCccchhhhhHHHHHHH-HHHHHHHHHHHHHHHH
Q 019756 249 FVIMSEIFPINVKASAGSLVILIC-WSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 249 ~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~~~~~~~~~l~~ 288 (336)
.-+..|+.|++.|.++.++..... .+|.+-+|++.|.+.+
T Consensus 371 ~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd 411 (493)
T KOG1330|consen 371 NPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSD 411 (493)
T ss_pred cceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHH
Confidence 456788899999999999988875 4577778878888887
No 204
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.51 E-value=3.7e-07 Score=84.04 Aligned_cols=112 Identities=18% Similarity=-0.018 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
.......++.+.|.++.|++.||+|||+++.. .++++.++.++++.......
T Consensus 88 ~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~----------------------------~liImIi~t~~~~~s~~~~~ 139 (538)
T KOG0252|consen 88 LVNAAALVGTIFGQLFFGWLGDKFGRKKVYGK----------------------------ELIIMIICSALSGLSVGTTS 139 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhhhH----------------------------HHHHHHHHHHHhccCCCCCC
Confidence 67777888999999999999999999999987 77778888776654332221
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHH
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYT 282 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~ 282 (336)
. ......+.....+.+..-.|-+|+..+.++|..-.+.||.-.+...+....|...+..+
T Consensus 140 ~-----~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~iv 199 (538)
T KOG0252|consen 140 P-----LGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIV 199 (538)
T ss_pred C-----cchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHH
Confidence 1 12233444555555555566689999999999999999998888766655554444433
No 205
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.50 E-value=6.9e-07 Score=85.87 Aligned_cols=175 Identities=16% Similarity=0.212 Sum_probs=125.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccc
Q 019756 99 YANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRT 175 (336)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~ 175 (336)
+-|...++.++.....++....+..+.+.+.++++.+.+ +...+..........+.+.+.||+|.|++.+.
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~------ 116 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIA------ 116 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHH------
Confidence 445555666666666666666666777888888877665 55555556667778888999999999999999
Q ss_pred ccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhh-hhhcc
Q 019756 176 LFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPF-VIMSE 254 (336)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e 254 (336)
|.++..+++++..+. .+.|..++.. .+..+.+.+....+. +.+.
T Consensus 117 ----------------------G~~v~~~g~~lssF~-----------~~i~~l~lt~-gvi~G~G~~~~~~paiviv~- 161 (509)
T KOG2504|consen 117 ----------------------GGLVAALGLLLSSFA-----------TSLWQLYLTF-GVIGGLGLGLIYLPAVVILG- 161 (509)
T ss_pred ----------------------HHHHHHHHHHHHHHH-----------hhHHHHHHHH-HHHhhccchhhhcchhhhhh-
Confidence 888888888888765 2222222322 223333333322322 4444
Q ss_pred cCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhcc
Q 019756 255 IFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 255 ~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
.+..++|+.+.|+......+|..+-|.+...+.+ .+|++.+++.+.+.+-.++......|
T Consensus 162 ~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 162 TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4556789999999999999999999988888888 89999999999988777776666655
No 206
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.42 E-value=1e-06 Score=82.22 Aligned_cols=162 Identities=12% Similarity=0.075 Sum_probs=108.6
Q ss_pred HHhhhhHHHHHhHHHHHHH-hCCCchhHHHHHH---HHHHHHHHHHHHhhhhc-CCceeeeeeccccccccccccccccc
Q 019756 113 QQFGGASAMAYYTSSIFEK-AGASGSIGSRGIA---IIQIPAVITSVLLMDKA-GRKPLLMVITTSRTLFKMFDFVDQRG 187 (336)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~---~~~~~g~~~~~~l~dr~-grr~~l~~~~~~~~~~~~~~~~~~~~ 187 (336)
.+++....+.+|+.+-..+ +|++.+......+ ..--...+++||++||+ |+|+.++.
T Consensus 36 syYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~l------------------ 97 (498)
T COG3104 36 SYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVL------------------ 97 (498)
T ss_pred hhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH------------------
Confidence 3344444555554443221 3466653333333 33345678999999995 99999998
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCcc--chhhhh
Q 019756 188 YENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPIN--VKASAG 265 (336)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~ 265 (336)
|.++++++.++++... ........+++.. ........-+....++.|++|++ .|-.+.
T Consensus 98 ----------Gail~~iGh~~L~~~~---------~~~~~gl~i~L~~-I~iG~Gl~K~NiS~llg~ly~~~DprrD~gF 157 (498)
T COG3104 98 ----------GAILMAIGHLVLAISS---------VSGPGGLYIGLAL-IIVGTGLFKPNISSLLGELYPKDDPRRDGGF 157 (498)
T ss_pred ----------HHHHHHHHHHHHhccc---------cccccHHHHHHHH-HHhccccccccHHHHHHHhcCCCCcccCCCc
Confidence 9999999999888531 0112222333333 33444455667779999999764 478888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhh
Q 019756 266 SLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 266 ~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
++.++..++|++++|.+.+++.+ .+|...|...++-..++.+..++.
T Consensus 158 t~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 158 TLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred cEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999998 788778877777666666654443
No 207
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.40 E-value=6.3e-06 Score=75.02 Aligned_cols=132 Identities=10% Similarity=-0.153 Sum_probs=97.0
Q ss_pred HHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhh
Q 019756 120 AMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQ 196 (336)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (336)
......|.+.+.++.+.. ........+.+.+++..+++.+|+|+|+.++.
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~l--------------------------- 83 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVL--------------------------- 83 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHH---------------------------
Confidence 344556667776776654 66777778889999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHH
Q 019756 197 ISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCS 276 (336)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 276 (336)
|+.++++++.+...+-. ...+...++..+..+.+-....+....+++.+.|++..+.-+.+...+..+|+
T Consensus 84 -gL~l~avg~~lF~pAa~---------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa 153 (422)
T COG0738 84 -GLLLYAVGAALFWPAAS---------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGA 153 (422)
T ss_pred -HHHHHHHHHHHHhhhhh---------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHH
Confidence 99999999988863311 12233333333333333223345567889999999888889999999999999
Q ss_pred HHHHHHHHHHHH
Q 019756 277 WIVTYTFNFMMQ 288 (336)
Q Consensus 277 ~~~~~~~~~l~~ 288 (336)
+++|.+.+.+..
T Consensus 154 ~~gp~~g~~lil 165 (422)
T COG0738 154 ILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHHHH
Confidence 999999887665
No 208
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.36 E-value=4.5e-06 Score=79.91 Aligned_cols=73 Identities=14% Similarity=0.062 Sum_probs=52.1
Q ss_pred CccchhhhhhcccCCccchhhh---hHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 243 GLAGIPFVIMSEIFPINVKASA---GSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 243 ~~~~~~~~~~~e~~p~~~r~~~---~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
......-.+..|..+ +.++.+ .+.......+|..+++.+.+.+.+ .++...|++.+++.++. .+...+.+|.+
T Consensus 136 ~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~ 212 (468)
T TIGR00788 136 LYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERR 212 (468)
T ss_pred HHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHH-HHHHHhccccc
Confidence 334556788999988 544443 334444455899999999999888 68888888888887777 33456668864
No 209
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.34 E-value=6.8e-06 Score=77.74 Aligned_cols=161 Identities=14% Similarity=0.114 Sum_probs=97.8
Q ss_pred HhHHHHHHHhCCCchhHHHHHHHHHHHHH---HHHHHhhh----hcCCceeeeeecccccccccccccccccccccchhh
Q 019756 123 YYTSSIFEKAGASGSIGSRGIAIIQIPAV---ITSVLLMD----KAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 123 ~~~~~~~~~~g~~~~~~~~~~~~~~~~g~---~~~~~l~d----r~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
+..+++.+..|.++.....+..+..+... ++.|.++| |+|||+..+..
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~------------------------- 77 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILI------------------------- 77 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeeh-------------------------
Confidence 33444455568888755555555554444 58888999 79988776651
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHH-HHHHHHHHHHHhhcCccchhhhhhcccCCc-cchhhhhHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHIL-VLVGFMGCSAFNSIGLAGIPFVIMSEIFPI-NVKASAGSLVILICW 273 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~ 273 (336)
+.+..+++.+++... .+.. .+...... ..+....+..++... .....++.+|+.++ ++|....+.-.....
T Consensus 78 --g~i~~~~~~~llf~~--~p~~--~~~~~~~~~~~~~~~l~~~~~t~~-~i~~~al~~~lt~~~~~R~~l~~~~~~~~~ 150 (428)
T PF13347_consen 78 --GAILLALSFFLLFSP--PPAG--LSFTAKLVWLFVFYILFDIAYTFV-QIPYNALIPELTPDPDERTRLSSWRMIFSM 150 (428)
T ss_pred --hhHHHHHHHHHhhcc--ccch--hhhhhHHHHHHHHHHHHHHhhhhc-cCchhhcCccccccHhhhhhHHHHHHHHHH
Confidence 555555554444311 0100 01111112 233333334444433 33446899999974 689999999999999
Q ss_pred HHHHHHHHHHHHHHH--h------hcchhhhHHHHHHHHHHHHHHhhccC
Q 019756 274 SCSWIVTYTFNFMMQ--W------SSAGTFFIFSGIGFFTVLFVAKIVPE 315 (336)
Q Consensus 274 ~g~~~~~~~~~~l~~--~------~~~~~~~~~~~~~~~~~i~~~~~~~e 315 (336)
+|..+...+.+.+.+ . ++.....+.+++.+++.++..+..+|
T Consensus 151 ~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 151 IGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 988777777666554 1 45566677777777777777777788
No 210
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.31 E-value=9e-06 Score=77.10 Aligned_cols=137 Identities=16% Similarity=0.198 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhcccccc
Q 019756 143 IAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMN 222 (336)
Q Consensus 143 ~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (336)
.++..++.+...|.++||+|||..+.. ..+...+..+.+.+..
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~----------------------------~~~~~~l~~~~~~~~~--------- 113 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLL----------------------------PLFGTILPALCLLFQG--------- 113 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHH----------------------------HHHHHHHhHHHHHHHH---------
Confidence 356778888899999999999998877 4444444444333211
Q ss_pred chhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHH
Q 019756 223 DAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGI 301 (336)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~ 301 (336)
|...+ .....+++. .......++++|....+.|....|+.+...+.+..++|...+...+ .+...++.+.++.
T Consensus 114 ----~~~~~-~~~l~g~~~-~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~ 187 (463)
T KOG2816|consen 114 ----YWFFL-LLGLSGGFS-AIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAAS 187 (463)
T ss_pred ----HHHhh-hcccccchh-hhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 12112 111111111 1234457899999999999999999999999999999999999888 8888899999999
Q ss_pred HHHHHHHHHhhccCCCCCCHH
Q 019756 302 GFFTVLFVAKIVPETKGRTLE 322 (336)
Q Consensus 302 ~~~~~i~~~~~~~et~~~~~~ 322 (336)
.++..+...+++||+..++.+
T Consensus 188 ~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 188 GILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred HHHHHHHHhhccccccCcccc
Confidence 999999999999998655443
No 211
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.31 E-value=6.5e-06 Score=81.64 Aligned_cols=40 Identities=13% Similarity=0.182 Sum_probs=34.4
Q ss_pred hhhhcccCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHH
Q 019756 249 FVIMSEIFPINVKASAGSLVILICWS-CSWIVTYTFNFMMQ 288 (336)
Q Consensus 249 ~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~ 288 (336)
...+-...|++.|+.+.|+.....++ |.+-+|+++|.+.|
T Consensus 540 ~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD 580 (633)
T TIGR00805 540 YMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLID 580 (633)
T ss_pred heEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhh
Confidence 45667788999999999999988666 67889999999988
No 212
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.23 E-value=3.2e-05 Score=72.99 Aligned_cols=50 Identities=18% Similarity=0.044 Sum_probs=37.5
Q ss_pred HHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCC-ceeeee
Q 019756 120 AMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGR-KPLLMV 169 (336)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~gr-r~~l~~ 169 (336)
.+.+..+.+.++.|.+.. +......++.+++.+..|.++||+|| |+++.+
T Consensus 21 ~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~ 74 (418)
T TIGR00889 21 WLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAV 74 (418)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 345555556666788776 66777888899999999999999965 655555
No 213
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.17 E-value=5.1e-06 Score=78.23 Aligned_cols=144 Identities=10% Similarity=-0.027 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCC-ceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhh
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGR-KPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLK 216 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (336)
+......++..++++..|+...|.++ |+.++. |++.+++++++.....+.+
T Consensus 75 ~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~----------------------------s~ii~~~g~llY~~l~~~~ 126 (488)
T KOG2325|consen 75 LVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIV----------------------------SFLIAIIGNLLYLALAYVP 126 (488)
T ss_pred HHHHHHHHHHHhcchhhcccccccCCcccCHHH----------------------------HHHHHHHHHHHHHHHHhcc
Confidence 77777889999999999999999985 666667 9999999999986554444
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH---h----
Q 019756 217 EVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ---W---- 289 (336)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~---- 289 (336)
+. ..+..+++..+ .+.+.+.....-.|+++..-.+.|.++++......-+|..+||.+...+.. .
T Consensus 127 ~~------~~y~mL~~R~l--~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i 198 (488)
T KOG2325|consen 127 NG------VKYLMLVARIL--TGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMI 198 (488)
T ss_pred cc------hHHHHHHHHHH--cCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEE
Confidence 31 22344444333 333334456667999998877888898888888777777777777655443 1
Q ss_pred -------hcchhhhHHHHHHHHHHHHHHhhccCCC
Q 019756 290 -------SSAGTFFIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 290 -------~~~~~~~~~~~~~~~~~i~~~~~~~et~ 317 (336)
.+..+-++.+++.++..+...++.+|..
T Consensus 199 ~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 199 LPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred cCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 1334567788888888887777777653
No 214
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.10 E-value=2.7e-06 Score=77.16 Aligned_cols=237 Identities=10% Similarity=-0.040 Sum_probs=130.3
Q ss_pred chhhHHHHHhh----CccchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHH
Q 019756 3 TFGCSLAYFFG----NVIPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAAEIRD 78 (336)
Q Consensus 3 ~~G~~l~~~l~----~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 78 (336)
++|.++++.++ +..|.+.+|++.++.+++-..+.+++-|..+-
T Consensus 206 slG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~--------------------------------- 252 (464)
T KOG3764|consen 206 SLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM--------------------------------- 252 (464)
T ss_pred hccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc---------------------------------
Confidence 34444444444 45599999999888888877776665442110
Q ss_pred HHHHhhchhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCC---CchhHHHHHHHHHHHHHHHHH
Q 019756 79 HIEISQKHSEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGA---SGSIGSRGIAIIQIPAVITSV 155 (336)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~g~~~~~ 155 (336)
+++.+.+..+++++++.++....... ....+.+....-..+..-..+++.. ...+......+...+++.+.|
T Consensus 253 --~~~~~~~~~~~~~Ll~dP~I~~~aga---i~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg 327 (464)
T KOG3764|consen 253 --DPDSTEQGTPMWSLLMDPYILLIAGA---ITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFG 327 (464)
T ss_pred --CccccccCccHHHHHhCchHhhhhcc---hhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHH
Confidence 00012233446677766655433222 2222221111112222223444442 222667777888999999999
Q ss_pred HhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHH
Q 019756 156 LLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMG 235 (336)
Q Consensus 156 ~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (336)
.+.||++.-+.+..+. +.+...+++..+-+. . .....+....+..+
T Consensus 328 ~la~k~~~~~wl~~~~--------------------------gl~~~G~~~~~iP~~---~-----~~~~L~vp~~~l~~ 373 (464)
T KOG3764|consen 328 KLADKYPHLRWLLSLG--------------------------GLATVGVSSGPIPFA---T-----SIAQLWVPNFGLGF 373 (464)
T ss_pred HHHHhcCchhHHHHHH--------------------------HHHHHHHHhchhHhh---h-----hHHHHhhhhHHHHH
Confidence 9999999332222200 222222222222111 1 00112222233333
Q ss_pred HHHHhhcCccchhhhhhcccCCcc---chhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHh
Q 019756 236 CSAFNSIGLAGIPFVIMSEIFPIN---VKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAK 311 (336)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~ 311 (336)
.+........|. ..++.|.-..+ .-|...++......+|.+++|.+.+.+.+ .++.|...+.+...++-.-++.+
T Consensus 374 ~i~~~dasl~P~-l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 374 GIGLADASLIPT-LGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred HHHHHHHHHhhh-hHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 233333333333 34555544444 67888999999999999999999999998 88888888888887776665444
Q ss_pred h
Q 019756 312 I 312 (336)
Q Consensus 312 ~ 312 (336)
+
T Consensus 453 l 453 (464)
T KOG3764|consen 453 L 453 (464)
T ss_pred H
Confidence 3
No 215
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.10 E-value=0.00047 Score=66.12 Aligned_cols=86 Identities=10% Similarity=0.097 Sum_probs=56.8
Q ss_pred hhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHH-HHHH
Q 019756 198 SACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILIC-WSCS 276 (336)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~ 276 (336)
|++.++++..++.+.....+.. . ..+...++....+....-....|+..+.++++.|++.||..+|+..... .+|+
T Consensus 351 g~~~~g~~f~~l~~~~~~~~~~--~-~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~ 427 (493)
T PRK15462 351 GLGLMSAGFCILTLSARWSAMY--G-HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIAN 427 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcCCC--C-CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 5555566655554433322211 1 1233445556666777788888999999999999999999999996643 5676
Q ss_pred HHHHHHHHHH
Q 019756 277 WIVTYTFNFM 286 (336)
Q Consensus 277 ~~~~~~~~~l 286 (336)
.++..+.+..
T Consensus 428 ~~~g~~~~~~ 437 (493)
T PRK15462 428 YLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHh
Confidence 6666665544
No 216
>PRK09669 putative symporter YagG; Provisional
Probab=98.09 E-value=3.9e-05 Score=72.90 Aligned_cols=155 Identities=12% Similarity=0.047 Sum_probs=87.2
Q ss_pred HHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhh----cCCceeee-eecccccccccccccccccccccchhhhhhh
Q 019756 128 IFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDK----AGRKPLLM-VITTSRTLFKMFDFVDQRGYENGYQYLQISA 199 (336)
Q Consensus 128 ~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr----~grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (336)
+.+..|.+.. ....+..+...+..++.|+++|| +|||+..+ . +.
T Consensus 36 ~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~----------------------------~~ 87 (444)
T PRK09669 36 YTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLW----------------------------FA 87 (444)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHH----------------------------HH
Confidence 4455788876 44444555567777889999998 77755544 4 44
Q ss_pred hhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccC-CccchhhhhHHHHHHHHHHHHH
Q 019756 200 CGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIF-PINVKASAGSLVILICWSCSWI 278 (336)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~ 278 (336)
+..+++..++. ..++... ....+...+....+..+++. ......++.+|+. ++++|.+..+.-.....+|+.+
T Consensus 88 ~~~~i~~~l~f---~~p~~~~--~~~~~~~~~~~~l~~~~~t~-~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i 161 (444)
T PRK09669 88 IPFGVVCLLTF---YTPDFGA--TGKIIYACVTYILLSLVYTA-INVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLI 161 (444)
T ss_pred HHHHHHHHHHH---hCCCCCc--chHHHHHHHHHHHHHHHHHh-hcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433221 2221111 11122222223333334443 2333457888988 5578998888888888888888
Q ss_pred HHHHHHHHHH--------hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 279 VTYTFNFMMQ--------WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 279 ~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
++.+..++.. .+|...+.+.++++.+..++.++..+|.
T Consensus 162 ~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 162 VSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence 8776554443 1233355555665555555555555554
No 217
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.09 E-value=6.4e-06 Score=76.45 Aligned_cols=54 Identities=11% Similarity=0.057 Sum_probs=38.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhhcc
Q 019756 261 KASAGSLVILICWSCSWIVTYTFNFMMQWSSAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 261 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
.+.-.|=.-+++.+|-++++.+.|.+.+.+....+++....+++..++..+..|
T Consensus 136 ~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~ 189 (412)
T PF01306_consen 136 NGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKP 189 (412)
T ss_dssp HSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--
T ss_pred hcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 344567788889999999999999999877777788766666555555444443
No 218
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.07 E-value=4.5e-05 Score=70.48 Aligned_cols=196 Identities=14% Similarity=0.131 Sum_probs=110.9
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCC---chhHHHHHHHHHHHHHHHHHHhhhhcCCc
Q 019756 88 EARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGAS---GSIGSRGIAIIQIPAVITSVLLMDKAGRK 164 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~g~~~~~~l~dr~grr 164 (336)
..+.++.+++++.....++.... .+..+.....+...+...|.+ .........+.++++++++|.+.||.+.-
T Consensus 256 ~~si~~~~~n~~F~il~~~ygi~----~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f 331 (480)
T KOG2563|consen 256 PKSIKSCFKNRQFIILAICYGIG----LGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF 331 (480)
T ss_pred HHHHHHHHcCccHHHHHHHHhhh----HHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 44566777776655444333222 223334444433333344444 33677778888999999999999998764
Q ss_pred eeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCc
Q 019756 165 PLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGL 244 (336)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (336)
+..+. +......++. ++........ .. ...+.......+++..+.
T Consensus 332 k~~~~---------------------------v~~~~~~v~~-~~l~~~t~~~------~~-~viv~~t~~~~g~~~~~~ 376 (480)
T KOG2563|consen 332 KLTTL---------------------------VLYLFALVGT-LMLLTCTLFL------GD-SVIVFTTCGLLGFFGTGY 376 (480)
T ss_pred HHHHH---------------------------HHHHHHHHHH-HHHHHhhccC------Cc-eEehhhhHHHHHHhhcCC
Confidence 44322 0111111221 1111111110 11 122233334455666677
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hh----cchhhhHHHHHHHHHHHHHHhhccCCCCC
Q 019756 245 AGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WS----SAGTFFIFSGIGFFTVLFVAKIVPETKGR 319 (336)
Q Consensus 245 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~----~~~~~~~~~~~~~~~~i~~~~~~~et~~~ 319 (336)
.|+-.-+-.|..-+..-++..|+.+..+++-+.+-..+.+...+ .+ +...-+.....+.+.+++..++.|+-+++
T Consensus 377 ~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~ 456 (480)
T KOG2563|consen 377 LPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL 456 (480)
T ss_pred CCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence 78888888887756667888999999999988888888887776 33 33334455555555666666665554444
Q ss_pred CHH
Q 019756 320 TLE 322 (336)
Q Consensus 320 ~~~ 322 (336)
+.|
T Consensus 457 ~~e 459 (480)
T KOG2563|consen 457 RAE 459 (480)
T ss_pred hhh
Confidence 333
No 219
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.02 E-value=0.00051 Score=64.57 Aligned_cols=132 Identities=14% Similarity=0.005 Sum_probs=81.3
Q ss_pred HHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhh
Q 019756 122 AYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQIS 198 (336)
Q Consensus 122 ~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (336)
...+..+.+..|.++. ..-....+.++.|.++..++.+|+|..+.-.+ +
T Consensus 278 ~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~----------------------------~ 329 (432)
T PF06963_consen 278 GGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLW----------------------------S 329 (432)
T ss_pred cHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHH----------------------------H
Confidence 3344445566688887 34445556678889999999999998777666 6
Q ss_pred hhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHH
Q 019756 199 ACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWI 278 (336)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 278 (336)
......+..+....+..+..+. + ..+...++......=.+--++--...-++.|..|+++||+..|.-+..+++...+
T Consensus 330 l~~q~~~L~~~v~~~~~~~~~~-~-~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 330 LWWQWVCLALCVVSFWAPGSPF-S-SISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCCc-h-hhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 5555555555554444443321 1 1111222222222222222333345678899999999999999999998887766
Q ss_pred HHHHH
Q 019756 279 VTYTF 283 (336)
Q Consensus 279 ~~~~~ 283 (336)
...+.
T Consensus 408 ~~~~~ 412 (432)
T PF06963_consen 408 SFVLT 412 (432)
T ss_pred HHHHH
Confidence 55543
No 220
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.01 E-value=0.00016 Score=69.30 Aligned_cols=162 Identities=8% Similarity=-0.018 Sum_probs=84.6
Q ss_pred HHHhHHHHH-HHhCCCch---hHHHHHHHHHHHHHHHHHHhhh----hcCCceee-eeeccccccccccccccccccccc
Q 019756 121 MAYYTSSIF-EKAGASGS---IGSRGIAIIQIPAVITSVLLMD----KAGRKPLL-MVITTSRTLFKMFDFVDQRGYENG 191 (336)
Q Consensus 121 ~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~d----r~grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~ 191 (336)
...|++.++ +..|.+.. ....+.-+...+..++.|+++| |+|||+.. ..
T Consensus 25 ~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~---------------------- 82 (473)
T PRK10429 25 VYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILI---------------------- 82 (473)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhh----------------------
Confidence 334444443 44588876 3444455556677778899999 56985544 44
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccC-CccchhhhhHHHHH
Q 019756 192 YQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIF-PINVKASAGSLVIL 270 (336)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~ 270 (336)
+.+..+++..++. ..++.. .....+...+....+..+++.. .....++..|+. ++++|.+..+.-..
T Consensus 83 ------g~i~~~i~~~llf---~~p~~~--~~~~~~~~~~~~~l~~~~~t~~-~ip~~al~~~lt~~~~eR~~l~~~~~~ 150 (473)
T PRK10429 83 ------GTLANSVVLFLLF---SAHLFE--GTAQYVFVCVTYILWGMTYTIM-DIPFWSLVPTLTLDKREREQLVPYPRF 150 (473)
T ss_pred ------hhHHHHHHHHHHH---cCCCCC--ccHHHHHHHHHHHHHHHHHHHH-cchHHhhhHHhCCCHHHHHHHHHHHHH
Confidence 4444444433331 111111 0011112222222333333332 233357889988 57899998888777
Q ss_pred HHHHHHHHHHHHHHHHHH-h-------hcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 271 ICWSCSWIVTYTFNFMMQ-W-------SSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 271 ~~~~g~~~~~~~~~~l~~-~-------~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
...+|+.+.+.+...+.+ . ++.....+.+++..++.....+..+|.
T Consensus 151 ~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 151 FASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 777776666655443322 1 222333444444444444455545664
No 221
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.00 E-value=0.00036 Score=63.13 Aligned_cols=152 Identities=16% Similarity=0.072 Sum_probs=82.7
Q ss_pred HHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhH
Q 019756 127 SIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMA 203 (336)
Q Consensus 127 ~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (336)
.+.++.|++.. ...........+...+.|.+.||+|||+..+. .+++.+
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~----------------------------~cily~ 110 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLL----------------------------FCILYS 110 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH----------------------------HHHHHH
Confidence 45577888866 33333444456666777889999999998777 666666
Q ss_pred HHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchh-hhhhccc----CCccchhhhhHHHHHH-HHHHHH
Q 019756 204 FGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIP-FVIMSEI----FPINVKASAGSLVILI-CWSCSW 277 (336)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~----~p~~~r~~~~~~~~~~-~~~g~~ 277 (336)
++|+..-. ......+++. ++++.......... .-++.|. +|.+..+...+..... ..+-++
T Consensus 111 ~scl~k~~------------~~~~~L~~GR-vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI 177 (354)
T PF05631_consen 111 LSCLTKHS------------SNYPVLLLGR-VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAI 177 (354)
T ss_pred HHHHHHhc------------cccHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHH
Confidence 66654321 1122222332 22332222111111 1234443 3444444434433322 223344
Q ss_pred HHHHHHHHHHH---hhcchhhhHHHHHHHHHHHHHHhhccCCCCC
Q 019756 278 IVTYTFNFMMQ---WSSAGTFFIFSGIGFFTVLFVAKIVPETKGR 319 (336)
Q Consensus 278 ~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~ 319 (336)
.+..+...+.+ .+...+|.....+..++.++.....+|+.++
T Consensus 178 ~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 178 GAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 45555555555 2346778888887777777776667787654
No 222
>PRK11462 putative transporter; Provisional
Probab=97.96 E-value=0.0004 Score=66.43 Aligned_cols=155 Identities=12% Similarity=0.068 Sum_probs=86.7
Q ss_pred HHHhCCCchhHHH---HHHHHHHHHHHHHHHhhhh----cCCceeeeeecccccccccccccccccccccchhhhhhhhh
Q 019756 129 FEKAGASGSIGSR---GIAIIQIPAVITSVLLMDK----AGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACG 201 (336)
Q Consensus 129 ~~~~g~~~~~~~~---~~~~~~~~g~~~~~~l~dr----~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (336)
.+..|+++..... +.-+...+.-++.|.++|| +|||+..+. ++.+.
T Consensus 37 t~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il---------------------------~g~i~ 89 (460)
T PRK11462 37 TDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVL---------------------------FGALP 89 (460)
T ss_pred HHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHh---------------------------HHHHH
Confidence 3446888774444 4444556777788999996 687766554 04444
Q ss_pred hHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCC-ccchhhhhHHHHHHHHHHHHHHH
Q 019756 202 MAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFP-INVKASAGSLVILICWSCSWIVT 280 (336)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~ 280 (336)
++++++++- ..++.+. . .......+....+..++..... ...++.+|+.+ .++|++..+.-...+.+|+.+++
T Consensus 90 ~~i~~~llf---~~p~~s~-~-~~~~y~~~~~~~~~~~~t~~~i-py~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~ 163 (460)
T PRK11462 90 FGIVCVLAY---STPDLSM-N-GKMIYAAITYTLLTLLYTVVNI-PYCALGGVITNDPTQRISLQSWRFVLATAGGMLST 163 (460)
T ss_pred HHHHHHHHH---hCCCCCc-c-hHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444433321 1222111 1 1112222232333334433322 33578888886 67899999999999999988887
Q ss_pred HHHHHHHH-h-------hcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 281 YTFNFMMQ-W-------SSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 281 ~~~~~l~~-~-------~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
.+...+.+ . ++.....+++++.+++..++....+|.
T Consensus 164 ~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 164 VLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceec
Confidence 77655544 2 233344455555555554444445554
No 223
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.95 E-value=0.00015 Score=71.48 Aligned_cols=54 Identities=13% Similarity=0.038 Sum_probs=39.8
Q ss_pred HHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHH
Q 019756 234 MGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS-CSWIVTYTFNFMMQ 288 (336)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~ 288 (336)
.+.......+..|. +.++-...|++.|..++|+..++.++ |.+-+|+++|++.|
T Consensus 594 ~~~sf~~~~~~~p~-~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 594 AIGSFIGALGAVPG-MLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred HHHHHHHHhccCcc-eEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHh
Confidence 33333344433333 56777889999999999999888655 67779999999987
No 224
>PTZ00207 hypothetical protein; Provisional
Probab=97.95 E-value=0.00086 Score=65.58 Aligned_cols=187 Identities=9% Similarity=0.082 Sum_probs=96.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHh-CC--Cc--h-hHHHHHHHHHHHHHHHHHHhhhhcCC
Q 019756 90 RLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKA-GA--SG--S-IGSRGIAIIQIPAVITSVLLMDKAGR 163 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~--~~--~-~~~~~~~~~~~~g~~~~~~l~dr~gr 163 (336)
++.+.+++...|.+++..++.. +.......-+..+.+.+ |. +. + ......++.+++|.+..|+++....|
T Consensus 345 t~~q~l~~~d~Wll~~~~~cg~----g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~ 420 (591)
T PTZ00207 345 TFIEGLKTARLWCLLWSIFCCV----GAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQK 420 (591)
T ss_pred hHHHHHhchhHHHHHHHHHHhh----CchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHh
Confidence 4555555555555544333222 22333344455566666 55 22 2 26788899999999999998733333
Q ss_pred ce----eeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHH
Q 019756 164 KP----LLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAF 239 (336)
Q Consensus 164 r~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
|+ +-.. +. +.+..+ +.++.+++... .+ . ....+...+.+.+
T Consensus 421 ~~~~~r~prt------~~-----------------l~~~~~-~~~~~lll~~~--~p-------~--~~L~~~~~lvg~~ 465 (591)
T PTZ00207 421 RRAEDRVPIT------IA-----------------LFIPSV-CIITMLTLFLT--LP-------K--AALPLPYFIAAFA 465 (591)
T ss_pred hccccccchh------HH-----------------HHHHHH-HHHHHHHHHHH--CC-------c--cHhHHHHHHHHHH
Confidence 32 2211 00 000111 22222222211 11 0 1122333333333
Q ss_pred hhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHH-HHHHHHHHH-hh-------------cchhhhHHHHHHHH
Q 019756 240 NSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIV-TYTFNFMMQ-WS-------------SAGTFFIFSGIGFF 304 (336)
Q Consensus 240 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~-~~~~~~l~~-~~-------------~~~~~~~~~~~~~~ 304 (336)
++. ..++....++|+|. +.-|+-.-+......+|..+- -.++|.+.| .. +..+|++.++++.+
T Consensus 466 ~G~-~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~ 543 (591)
T PTZ00207 466 NGF-MAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFL 543 (591)
T ss_pred hhH-hHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHH
Confidence 332 23455688999999 776666666666666665554 445566665 11 23568888888888
Q ss_pred HHHHHHhhccCCC
Q 019756 305 TVLFVAKIVPETK 317 (336)
Q Consensus 305 ~~i~~~~~~~et~ 317 (336)
+.+....+.-+|+
T Consensus 544 g~~~s~~l~~R~r 556 (591)
T PTZ00207 544 AFITSTYVHLQYR 556 (591)
T ss_pred HHHHHhheeeehH
Confidence 8877665544454
No 225
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.91 E-value=0.00012 Score=66.08 Aligned_cols=137 Identities=12% Similarity=-0.011 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
+.......+..+++..+|.+.|++|||+.+.. ......+.-++-+.
T Consensus 117 llt~~v~~gmllga~~w~l~~d~~grr~~f~~----------------------------T~l~t~v~~~is~~------ 162 (528)
T KOG0253|consen 117 LLTLSVFLGMLVGAMVWGLSADTIGRRKGFNL----------------------------TFLVTGVFGVISGA------ 162 (528)
T ss_pred HHHHHHHhhhhhhhhhhheehhhhhcchhhhh----------------------------hHHHHHHHHHhhcC------
Confidence 55556667889999999999999999998776 33333333222221
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhh
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFF 296 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~ 296 (336)
..++..+. .+-+..+++.|-.|...++-.|..|...|..-+-.. ....+|.+....+.-..+. .+|++-..
T Consensus 163 ------spnf~~L~-~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~ 234 (528)
T KOG0253|consen 163 ------SPNFASLC-VFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLF 234 (528)
T ss_pred ------CCCeehhh-HHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 11122222 222333444444677778888999999998877666 6777788877777665555 67766666
Q ss_pred HHHHHHHHHHHHHHhhccCCC
Q 019756 297 IFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 297 ~~~~~~~~~~i~~~~~~~et~ 317 (336)
..+....+.+. ..+++||+.
T Consensus 235 ~~~~pl~~~a~-f~~w~~ESp 254 (528)
T KOG0253|consen 235 TSSTPLMFAAR-FLVWVYESP 254 (528)
T ss_pred HHHhHHHHHHH-HHhhcccCc
Confidence 65544444444 456678863
No 226
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.90 E-value=1.6e-05 Score=75.39 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=36.8
Q ss_pred hhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 249 FVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 249 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
..+++|+.|+...|+..++.....++|..++..+...+.+
T Consensus 340 lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~ 379 (433)
T PF03092_consen 340 LVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLME 379 (433)
T ss_pred HHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4779999999999999999999999999999999888876
No 227
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.68 E-value=0.012 Score=55.57 Aligned_cols=172 Identities=11% Similarity=0.070 Sum_probs=101.5
Q ss_pred hHHHHHhHHHHHHHh--C--CCchhHHHHHHHHHHHHHHHHHHhhhhcCCc--eeeeeeccccccccccccccccccccc
Q 019756 118 ASAMAYYTSSIFEKA--G--ASGSIGSRGIAIIQIPAVITSVLLMDKAGRK--PLLMVITTSRTLFKMFDFVDQRGYENG 191 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~--g--~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr--~~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (336)
.+.+..|.....+.. | +++++..+...+.-++.+.+..++..|.+|| ..-+- .|+
T Consensus 304 ~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~-------~KF------------ 364 (498)
T COG3104 304 GSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTP-------IKF------------ 364 (498)
T ss_pred cchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcc-------hHH------------
Confidence 445555555543332 2 3444777777777777777777777775444 22111 011
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHH
Q 019756 192 YQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILI 271 (336)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 271 (336)
.++...++.+.+++.........+ .+ ..+..+++....+..+.-....|+...++..+.|+...+..+|.+...
T Consensus 365 ----alGl~l~g~~fl~l~~~~~~~~~~-~~-~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt 438 (498)
T COG3104 365 ----ALGLILAGLGFLILLLAGIWFGGP-SG-LVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLT 438 (498)
T ss_pred ----HHHHHHHHHHHHHHHHHHHhhcCC-CC-CcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 003334444444444332222211 11 233444555556677778888899999999999999999999999888
Q ss_pred HHHHHHHHHHHHHH-------HHHhhcchhhhHHHHHHHHHHHHHHhhcc
Q 019756 272 CWSCSWIVTYTFNF-------MMQWSSAGTFFIFSGIGFFTVLFVAKIVP 314 (336)
Q Consensus 272 ~~~g~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (336)
...|+.++..+.+. .........|+..+...++..+......|
T Consensus 439 ~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~ 488 (498)
T COG3104 439 VAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSP 488 (498)
T ss_pred HHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhH
Confidence 88888887777762 22234445566666666665555444433
No 228
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.65 E-value=0.0013 Score=65.32 Aligned_cols=153 Identities=12% Similarity=0.085 Sum_probs=94.7
Q ss_pred HHHHHHhCCCchhHHH---HHHHHHHHHHHHHHHhhhh-cCCceeeeeecccccccccccccccccccccchhhhhhhhh
Q 019756 126 SSIFEKAGASGSIGSR---GIAIIQIPAVITSVLLMDK-AGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACG 201 (336)
Q Consensus 126 ~~~~~~~g~~~~~~~~---~~~~~~~~g~~~~~~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (336)
.++.+.+|.+...... ......-+..+++|++.|+ +||++.+.. +.++
T Consensus 12 lYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~----------------------------~~ii 63 (654)
T TIGR00926 12 LYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILY----------------------------LSIV 63 (654)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH----------------------------HHHH
Confidence 3344556766653222 2333345566778889996 699998888 7777
Q ss_pred hHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCcc---chhhhhHHHHHHHHHHHHH
Q 019756 202 MAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPIN---VKASAGSLVILICWSCSWI 278 (336)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~~~g~~~ 278 (336)
..++..++++... +... ........+++ +.+..++..+.-+...+...|.++++ .|.+...+.+...++|+++
T Consensus 64 ~~lG~~llai~a~-~~~~--~~~~~~~~l~g-LaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSli 139 (654)
T TIGR00926 64 YVVGHALLSFGAI-PSSG--HPLHDLLDLLG-LALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLI 139 (654)
T ss_pred HHHHHHHHHhccC-cccc--cchHHHHHHHH-HHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHH
Confidence 7777776664211 1100 00111222222 33344444455566678888888653 4677888899999999999
Q ss_pred HHHHHHHHHH-h-------hcchhhhHHHHHHHHHHHHHH
Q 019756 279 VTYTFNFMMQ-W-------SSAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 279 ~~~~~~~l~~-~-------~~~~~~~~~~~~~~~~~i~~~ 310 (336)
++.+.+.+.+ . +|...|.+.+++.+++.++..
T Consensus 140 s~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 140 STIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 9999988874 2 366677777776666665543
No 229
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.61 E-value=0.00076 Score=62.04 Aligned_cols=119 Identities=10% Similarity=0.004 Sum_probs=74.9
Q ss_pred HHHHHHHHHhhhhcC-----CceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhcc---c
Q 019756 148 IPAVITSVLLMDKAG-----RKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEV---K 219 (336)
Q Consensus 148 ~~g~~~~~~l~dr~g-----rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 219 (336)
-+.....|+.||+.+ ||..+++. |...+..+..+.......-.. .
T Consensus 28 ap~R~~~G~~SD~~~s~~G~rRtPyI~~---------------------------G~~~~~~g~~~ap~a~~~l~~~~~~ 80 (403)
T PF03209_consen 28 APLRVWFGHRSDTHPSILGWRRTPYIWG---------------------------GTLLQAGGLAIAPFALLLLAESGQQ 80 (403)
T ss_pred HHHHHHhccccccCcccCcCCchhhhHH---------------------------HHHHHHHHHHHHHHHHHHHcccccc
Confidence 456788999999998 88877662 555665555555543333222 1
Q ss_pred cccchhHHHHHHHHHHHHHHhhcC-ccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcch
Q 019756 220 NMNDAAHILVLVGFMGCSAFNSIG-LAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAG 293 (336)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~ 293 (336)
.......+.......+...+.+.. ..+...++++|..|++.|+++.++.....-+|.+++..+.+.+.+ ++...
T Consensus 81 ~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~r 156 (403)
T PF03209_consen 81 SSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPER 156 (403)
T ss_pred cccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 111111222222222222222222 234456899999999999999999999999999999999998877 44333
No 230
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.61 E-value=0.0035 Score=57.13 Aligned_cols=43 Identities=5% Similarity=-0.042 Sum_probs=38.0
Q ss_pred chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 246 GIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 246 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
+....+.....|.+.||+..|+....+.++-+++|.+.|.+..
T Consensus 371 t~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 371 TCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 3445777888899999999999999999999999999988776
No 231
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.60 E-value=0.00048 Score=65.16 Aligned_cols=142 Identities=15% Similarity=0.088 Sum_probs=95.6
Q ss_pred HHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHH
Q 019756 129 FEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFG 205 (336)
Q Consensus 129 ~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (336)
+++.+-.+. ......-.+.++..+..+++.+|+|+-+++.. ++.+..+=
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~l----------------------------gLa~~~~R 449 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYL----------------------------GLACNVGR 449 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeee----------------------------hhhHHHHH
Confidence 455553333 45555666788889999999999999999888 55555444
Q ss_pred HHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHH-HHHHHHHHHHHHH
Q 019756 206 CFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILI-CWSCSWIVTYTFN 284 (336)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~g~~~~~~~~~ 284 (336)
.+.+... .++|.++. +-++.+......+....+|++...|++.|+++.++.... -.+|-.+++++++
T Consensus 450 f~~~S~L-----------~n~W~vLP-ieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG 517 (618)
T KOG3762|consen 450 FLYYSYL-----------QNPWMVLP-IEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGG 517 (618)
T ss_pred HHHHHHh-----------cCchheee-HHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhh
Confidence 4444322 22333332 222333322233344569999999999999999998776 5667788888888
Q ss_pred HHHH-hhcchhhhHHHHHHHHHHHHHH
Q 019756 285 FMMQ-WSSAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 285 ~l~~-~~~~~~~~~~~~~~~~~~i~~~ 310 (336)
.+.+ .+...+|.++++.+++..++..
T Consensus 518 ~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 518 FVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred hhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 8877 7777788888887777665433
No 232
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.58 E-value=0.0007 Score=62.78 Aligned_cols=118 Identities=15% Similarity=0.073 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
+.+.+..+..++..+.+-|+.||+|-|....+ +..+..+++.+=..... +.
T Consensus 83 wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll----------------------------gt~ln~iGa~Ir~iss~-p~ 133 (480)
T KOG2563|consen 83 WLSMIYMVVSVPFGFAAMWILDKFGLRTALLL----------------------------GTVLNGIGAWIRLISSL-PF 133 (480)
T ss_pred HHHHHHHHHHHHHhhHHHHhhcccchHHHHHH----------------------------HHHHHHHHHHHhhhccC-cc
Confidence 88888899999999999999999999998888 77777777666543321 10
Q ss_pred cccccchhHH-HHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 218 VKNMNDAAHI-LVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 218 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
.+ ...+ .....-.............++.-...-+||+++|+++..+..+...+|.+++..+.+.+.+
T Consensus 134 v~----~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 134 VP----PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred cc----ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 10 1111 0111111122222222233444455567999999999999999999999888888776665
No 233
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.49 E-value=0.0022 Score=60.07 Aligned_cols=53 Identities=23% Similarity=0.177 Sum_probs=40.2
Q ss_pred hhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCC-ceeeee
Q 019756 117 GASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGR-KPLLMV 169 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~gr-r~~l~~ 169 (336)
.......|.+..+++.|++.. .......+..+++..+.|.++||.++ |+++.+
T Consensus 17 ~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~ 73 (400)
T PF03825_consen 17 AYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILAL 73 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHH
Confidence 355666777888999998876 55666777889999999999999864 444444
No 234
>PRK09848 glucuronide transporter; Provisional
Probab=97.48 E-value=0.0037 Score=59.42 Aligned_cols=42 Identities=14% Similarity=0.071 Sum_probs=29.8
Q ss_pred HHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhc----CCceee
Q 019756 126 SSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKA----GRKPLL 167 (336)
Q Consensus 126 ~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~----grr~~l 167 (336)
+++.+..|.+.. .......+...+..+..|+++||. |||+..
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~ 81 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPF 81 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHH
Confidence 334444688776 555566677888899999999996 666644
No 235
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.46 E-value=2.7e-05 Score=75.57 Aligned_cols=40 Identities=15% Similarity=0.028 Sum_probs=0.0
Q ss_pred hhhhcccCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHH
Q 019756 249 FVIMSEIFPINVKASAGSLVILICWS-CSWIVTYTFNFMMQ 288 (336)
Q Consensus 249 ~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~ 288 (336)
...+-...|++.|+.|.|+...+.++ |.+-+|+++|.+.|
T Consensus 473 ~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD 513 (539)
T PF03137_consen 473 TLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIID 513 (539)
T ss_dssp -----------------------------------------
T ss_pred heeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHh
Confidence 35566788999999999999988665 66789999998887
No 236
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.45 E-value=0.00088 Score=63.51 Aligned_cols=154 Identities=15% Similarity=0.159 Sum_probs=94.0
Q ss_pred HHHHHHhCCCchhHHHHHHHHHHHH--HHHHHHhhhhc---C-Cce-eeeeecccccccccccccccccccccchhhhhh
Q 019756 126 SSIFEKAGASGSIGSRGIAIIQIPA--VITSVLLMDKA---G-RKP-LLMVITTSRTLFKMFDFVDQRGYENGYQYLQIS 198 (336)
Q Consensus 126 ~~~~~~~g~~~~~~~~~~~~~~~~g--~~~~~~l~dr~---g-rr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (336)
+.+.+++|.++........+..++- ..+.|.++|-+ | ||+ -+++ +
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i----------------------------~ 65 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMII----------------------------G 65 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHH----------------------------H
Confidence 4466778999886666666666544 46889999975 2 444 4444 5
Q ss_pred hhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccC---CccchhhhhHHHHHHHHHH
Q 019756 199 ACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIF---PINVKASAGSLVILICWSC 275 (336)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~---p~~~r~~~~~~~~~~~~~g 275 (336)
.++..++...++.. +.... .. ... .....+..........+.-++.+|.. |.+ |+.-.+....+..+|
T Consensus 66 ~~~~~~~~~~~~~~---~~~~~---s~-~~~-~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G 136 (433)
T PF03092_consen 66 WLLGAVSALVLALL---PASES---SA-AIA-VVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVG 136 (433)
T ss_pred HHHHHHHHHHHHhc---ccccc---hh-hhH-HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHH
Confidence 54444444444322 11110 11 111 11111122222222334456777765 444 778888888899999
Q ss_pred HHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 276 SWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 276 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
++++..+.|.+.+ .+....|.+.+.+..+..+...+..+|.
T Consensus 137 ~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~ 178 (433)
T PF03092_consen 137 SLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEER 178 (433)
T ss_pred HHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999888 7777788888887777776666666663
No 237
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.44 E-value=0.0033 Score=60.28 Aligned_cols=143 Identities=11% Similarity=0.028 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhcc
Q 019756 139 GSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEV 218 (336)
Q Consensus 139 ~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (336)
...+..+...+..++-|-++|+-|+||.++.. ......+++..+.+. +.
T Consensus 75 ~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~---------------------------~~~~~~~~~~~l~~v----~~ 123 (477)
T PF11700_consen 75 ANSISGLLQALLAPFLGAIADYGGRRKRFLLI---------------------------FTLLGVLATALLWFV----SP 123 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchHHHHH---------------------------HHHHHHHHHHHHHHh----Cc
Confidence 34455666677777888899999988876550 222222233332221 11
Q ss_pred ccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccch--------------------------hhhhHHHHHHH
Q 019756 219 KNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVK--------------------------ASAGSLVILIC 272 (336)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--------------------------~~~~~~~~~~~ 272 (336)
...+...+...+...++.. ......+++.|+.+++.+ ++..+.....+
T Consensus 124 -----~~~~~~~~l~iia~v~~~~-~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~G 197 (477)
T PF11700_consen 124 -----GQWWLALVLFIIANVGYEA-SNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALG 197 (477)
T ss_pred -----chHHHHHHHHHHHHHHHHH-HHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHH
Confidence 1112222222222222222 223446889999988877 99999999999
Q ss_pred HHHHHHHHHHHHHHHH--hh-------cchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 273 WSCSWIVTYTFNFMMQ--WS-------SAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 273 ~~g~~~~~~~~~~l~~--~~-------~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
++|+.+.-.+.-.+.. .. .+..+.+.++..++..+-..+++||.++
T Consensus 198 y~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 198 YIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999887777654433 11 2445666666656555656667777654
No 238
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.41 E-value=0.0032 Score=59.47 Aligned_cols=162 Identities=19% Similarity=0.170 Sum_probs=90.5
Q ss_pred HHhHHHHHH-HhCCCchhHHHHHHH---HHHHHHHHHHHhhhh----cCCceeeeeecccccccccccccccccccccch
Q 019756 122 AYYTSSIFE-KAGASGSIGSRGIAI---IQIPAVITSVLLMDK----AGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQ 193 (336)
Q Consensus 122 ~~~~~~~~~-~~g~~~~~~~~~~~~---~~~~g~~~~~~l~dr----~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (336)
..|+.++.. ..|.++.....+..+ ...+.-.+.|.++|| +|||+..+.
T Consensus 32 ~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL------------------------ 87 (467)
T COG2211 32 VLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLL------------------------ 87 (467)
T ss_pred HHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHH------------------------
Confidence 334444333 358887754444444 455666788999996 676665443
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccC-CccchhhhhHHHHHHH
Q 019756 194 YLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIF-PINVKASAGSLVILIC 272 (336)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~ 272 (336)
++.+..++.+.+. +..++.+. ........+.......+++....|- .++.+|+. .+++|.+..+.-...+
T Consensus 88 ---~g~ip~~i~~~l~---F~~p~~~~--~~k~~ya~vtY~l~~l~YT~vniPy-~al~~~iT~d~~ER~~l~s~R~~~~ 158 (467)
T COG2211 88 ---WGAIPFAIVAVLL---FITPDFSM--TGKLIYALVTYMLLGLGYTLVNIPY-GALGPEITQDPQERASLTSWRMVFA 158 (467)
T ss_pred ---HHhHHHHHHHHHH---HcCCCccc--CcchHHHHHHHHHHHHHHHheeCch-hhcchhhcCCHHHHHHHHHHHHHHH
Confidence 0333333333322 22222111 1222333344444455555433333 47777777 4578999999999999
Q ss_pred HHHHHHHHHHHHHHHH-h-------hcchhhhHHHHHHHHHHHHHHhhccCC
Q 019756 273 WSCSWIVTYTFNFMMQ-W-------SSAGTFFIFSGIGFFTVLFVAKIVPET 316 (336)
Q Consensus 273 ~~g~~~~~~~~~~l~~-~-------~~~~~~~~~~~~~~~~~i~~~~~~~et 316 (336)
.+|+.+...+.+++.. . ++.....+++++..+..+.+++-.+|.
T Consensus 159 ~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 159 SLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999998888887776 1 333344445555555555555544543
No 239
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.40 E-value=0.016 Score=53.59 Aligned_cols=156 Identities=13% Similarity=-0.023 Sum_probs=98.0
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHH------HHhCCCch---hHHHHHHHHHHHHHHHHHHh
Q 019756 87 SEARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIF------EKAGASGS---IGSRGIAIIQIPAVITSVLL 157 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~---~~~~~~~~~~~~g~~~~~~l 157 (336)
-...+++++.+++.+++....++..+ .++.++.. +.+|.+.. ..+...+.+..+|....+++
T Consensus 197 f~~a~~~~~~~~~a~~f~~fl~l~t~---------a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~ 267 (403)
T PF03209_consen 197 FREAWRQVWASPQARRFFVFLFLGTL---------AFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFL 267 (403)
T ss_pred HHHHHHHHHhCCChhHHHHHHHHHHH---------HHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777777777654443332 33333322 23455544 66677778888999888886
Q ss_pred hh-hcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHH
Q 019756 158 MD-KAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGC 236 (336)
Q Consensus 158 ~d-r~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (336)
.. |.++++.... ++...+++..++...-...+ .+........+
T Consensus 268 l~~~~~~~~~a~~----------------------------G~~~~~~~f~lii~a~~~~~--------~~~~~~~~~l~ 311 (403)
T PF03209_consen 268 LSRRLGKKRTAAL----------------------------GCLLGALAFALIILAGPLGS--------PWLFRPGVFLL 311 (403)
T ss_pred hcCCCCchHHHHH----------------------------HHHHHHHHHHHHHHHHhccc--------chHHHHHHHHH
Confidence 66 5666666555 77777777666654432221 22223333333
Q ss_pred HHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 237 SAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 237 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
+...+.. .....+.+.|+.+++..|..+|.+.....+...++..+.+.+.|
T Consensus 312 G~g~G~f-~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 312 GLGNGLF-TVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred HHhhhHH-HHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222221 22234677888888899999999999988888888888888777
No 240
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.35 E-value=0.0022 Score=60.66 Aligned_cols=144 Identities=10% Similarity=0.038 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCc-h---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccc
Q 019756 101 NSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASG-S---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTL 176 (336)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~ 176 (336)
.+.++...+.+....+++.-...|.+.+.++..-+. . ..-.+..+.+.++++..|++-.++.|-..+
T Consensus 261 n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l--------- 331 (511)
T TIGR00806 261 NPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKL--------- 331 (511)
T ss_pred CcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHH---------
Confidence 334444445566666677888888888887764422 1 444555566677778888875555332122
Q ss_pred cccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccC
Q 019756 177 FKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIF 256 (336)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 256 (336)
..+++..+.+.....-... .+.|...+...++...+.... ++...-++...
T Consensus 332 ------------------------~l~v~s~~~~gll~~m~~t----~~Iw~~Y~~yvlf~~~y~fli-tia~~~iA~~L 382 (511)
T TIGR00806 332 ------------------------LIAVVSAIQAGLVFWMSQS----HDIWVLYVTYVLFRGIYQFLV-PIATFQIASSL 382 (511)
T ss_pred ------------------------HHHHHHHHHHHHhhhhhcc----cchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh
Confidence 2222222222222211111 234555555555555555432 23233344444
Q ss_pred CccchhhhhHHHHHHHHHHHHHHHHH
Q 019756 257 PINVKASAGSLVILICWSCSWIVTYT 282 (336)
Q Consensus 257 p~~~r~~~~~~~~~~~~~g~~~~~~~ 282 (336)
..+.-|...|++++.+-+-..+...+
T Consensus 383 ~~~~~aLvFGiNtfvAl~LQtilT~i 408 (511)
T TIGR00806 383 SKELCALVFGINTFVATALKTIITAV 408 (511)
T ss_pred cccceEEEEecHHHHHHHHHHheEEE
Confidence 55556888888888766655544433
No 241
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.28 E-value=0.00068 Score=64.45 Aligned_cols=117 Identities=10% Similarity=-0.001 Sum_probs=80.2
Q ss_pred HhCCCch---hHHHHHHHHHHHHHHHHH-HhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHH
Q 019756 131 KAGASGS---IGSRGIAIIQIPAVITSV-LLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGC 206 (336)
Q Consensus 131 ~~g~~~~---~~~~~~~~~~~~g~~~~~-~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (336)
.++++.. ......+....++.++.. .+...+|-|++... |.....+..
T Consensus 271 ~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~l----------------------------Gl~~~~~~~ 322 (463)
T KOG2816|consen 271 KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISL----------------------------GLLSEFLQL 322 (463)
T ss_pred ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhH----------------------------HHHHHHHHH
Confidence 3566665 344555555666666665 68888888886666 777777777
Q ss_pred HHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 019756 207 FLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFM 286 (336)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 286 (336)
...++. +..|....... .........+...+.++-+.+++.+|.+.++...+..+.+.++|.+.+.+
T Consensus 323 ~~~af~-----------~~~w~~~~~~v--~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 323 LLFAFA-----------TETWMMFAAGV--VVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred HHHHHh-----------ccchhhhHHHH--HHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 777654 22333222222 22223334456678888888999999999999999999999999999887
Q ss_pred HH
Q 019756 287 MQ 288 (336)
Q Consensus 287 ~~ 288 (336)
..
T Consensus 390 ~~ 391 (463)
T KOG2816|consen 390 FA 391 (463)
T ss_pred HH
Confidence 65
No 242
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.28 E-value=0.0048 Score=55.88 Aligned_cols=149 Identities=13% Similarity=0.031 Sum_probs=103.2
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
.+.....++.+.++.|.+.+ +......+.....+++..++..|+|.++.+..
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~------------------------- 82 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFL------------------------- 82 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHH-------------------------
Confidence 45667778888999998876 55566666677778888999999999988777
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
+.+..+++..+=... .....+.+....+.+.+.+ +.+.+..+-|-||.+ -+..+|++......
T Consensus 83 ---~Llli~~G~~iR~~~------------~~~~L~~gt~l~G~gIav~-nVLLPslIK~~Fpk~-~~~mtglYs~sl~~ 145 (395)
T COG2807 83 ---ALLLIAAGILIRSLG------------GLPLLFLGTLLAGAGIAVI-NVLLPSLIKRDFPKR-VGLMTGLYSTSLGA 145 (395)
T ss_pred ---HHHHHHHHHHHHhcc------------cHHHHHHHHHHHHhhHHHH-HHhhhHHHHhhcccc-hhhHHhHHHHHHHH
Confidence 655555555543321 1112222222222222221 234467788888864 58889999999999
Q ss_pred HHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHHHH
Q 019756 275 CSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTVLF 308 (336)
Q Consensus 275 g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~i~ 308 (336)
|+.+++.+..++.+ .+|++.....+..++++.++
T Consensus 146 ~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~ 181 (395)
T COG2807 146 GAALAAALAVPLAQHSGGWRGALGFWALLALLALLI 181 (395)
T ss_pred HHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 99999999998888 36888888888877776553
No 243
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.24 E-value=0.003 Score=58.71 Aligned_cols=148 Identities=15% Similarity=0.140 Sum_probs=71.7
Q ss_pred cchHHHHHHhHHHHHHHHHHHhcCCCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHH-HHHHHHHHhhchhhHHHHHH
Q 019756 16 IPWRILALIGVIPCVLQLIGLFFIPESPRWLVKIGKEKEFETTLQNLRGKGADISQEAA-EIRDHIEISQKHSEARLLNL 94 (336)
Q Consensus 16 ~gWr~~f~i~~i~~~i~~~~~~~lpEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 94 (336)
.+.+.+.+++.....++++..+++|..++-+.-+++.++..+ .++...++.+..++.. +.++.....+...+..++.+
T Consensus 158 ~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 236 (412)
T PF01770_consen 158 VSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQD-ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLL 236 (412)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccc-cccccccccccccccccccccCcccccchHHHHHHHH
Confidence 467888888777777777777888876653322222111110 0000000000000000 00000111111112222222
Q ss_pred h---hhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch------hHHHHHHHHHHHHHHHHHHhhhhcCCc
Q 019756 95 F---QRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS------IGSRGIAIIQIPAVITSVLLMDKAGRK 164 (336)
Q Consensus 95 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~------~~~~~~~~~~~~g~~~~~~l~dr~grr 164 (336)
+ ++-+..+.++...+.+....+++.-...|.+.+.++...+.. ..-....+.+.++++..|++..++.+-
T Consensus 237 ~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~ 315 (412)
T PF01770_consen 237 WKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW 315 (412)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH
Confidence 2 223334444455566677777788888898888888722211 445555566667777777775555543
No 244
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.04 E-value=0.037 Score=52.38 Aligned_cols=117 Identities=19% Similarity=0.207 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhh---cCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHh
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDK---AGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFY 214 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr---~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (336)
......+++.+.+.+..+.+.+| +||+++..+ +..+..+.+++.-..
T Consensus 283 i~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~----------------------------~~~~~~~~~~li~l~-- 332 (461)
T KOG3098|consen 283 IYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLI----------------------------GIIIHLIGFLLIHLS-- 332 (461)
T ss_pred HHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhH----------------------------HHHHHHHHHHHHhcc--
Confidence 45556667777777777777765 678888777 665555555555432
Q ss_pred hhccccccc--------hhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 019756 215 LKEVKNMND--------AAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNF 285 (336)
Q Consensus 215 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 285 (336)
.+...+..+ ..............++.-.......+.++.+++ ++.|..+.++.-.-..++..++....+.
T Consensus 333 ~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 333 FPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred ccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 222111111 112222333333344444445566678888888 4568888888777777766665555543
No 245
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.99 E-value=0.044 Score=52.29 Aligned_cols=112 Identities=10% Similarity=-0.017 Sum_probs=71.9
Q ss_pred HHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhccccccc----
Q 019756 148 IPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKNMND---- 223 (336)
Q Consensus 148 ~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 223 (336)
++...+.+++++|++|++++-. ..........+.++..+......+++
T Consensus 58 ~~~~~ly~~l~~~~~~~~lf~~----------------------------~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~ 109 (472)
T TIGR00769 58 VIFMLIYTKLSNILSKEALFYT----------------------------VISPFLGFFALFAFVIYPLSDLLHPTALAD 109 (472)
T ss_pred HHHHHHHHHHHhcCCHHHhHHH----------------------------HHHHHHHHHHHHHHHHhcchhhcCCcHHHH
Confidence 3336778899999999998776 45555555555554433222111000
Q ss_pred ------h----------hHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 019756 224 ------A----------AHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMM 287 (336)
Q Consensus 224 ------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 287 (336)
. ..|...+..............-+.|.+++|++..++..+-.++....+++|.++++.+...+.
T Consensus 110 ~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 110 KLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 122222222222233333223377999999999999999999999999999999998887766
No 246
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.89 E-value=0.0031 Score=44.26 Aligned_cols=59 Identities=20% Similarity=0.223 Sum_probs=46.5
Q ss_pred HHHHhhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeee
Q 019756 111 LLQQFGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMV 169 (336)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~ 169 (336)
.+..+++...+..|.|...++.|.+.. ....+..+..+++..++|.++||.+|++....
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHH
Confidence 444555667778888888999999987 55556667788999999999999999887654
No 247
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.80 E-value=0.027 Score=45.26 Aligned_cols=106 Identities=8% Similarity=-0.068 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
....+......+++++.+.+.+++|.|+.+++ |.+...+.... ...
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~l----------------------------g~~~y~~y~~~----~~~-- 86 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMIL----------------------------GSLGYAIYIAS----FFY-- 86 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHH----------------------------HHHHHHHHHHH----HHh--
Confidence 45555566677888889999999999998877 44433322211 111
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHH
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFN 284 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~ 284 (336)
...+..+..-.+.+.+.+. .......++.+...++.|++-.++.-.+...+.+++..+.-
T Consensus 87 ------~~~~~l~~~s~l~G~~~a~-lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 87 ------PNSYTLYPASALLGFGAAL-LWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred ------hhHHHHHHHHHHHhhhhHH-hhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1223333333333333333 33344577888888888898888887777777666665543
No 248
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.60 E-value=0.00038 Score=67.69 Aligned_cols=170 Identities=12% Similarity=0.046 Sum_probs=1.5
Q ss_pred hhhhHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeccccccccccccccccccccc
Q 019756 115 FGGASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENG 191 (336)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (336)
.........-.+++-+.++++.. +.....-++.++..++..++.+|..|-+.+-.
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~---------------------- 73 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGI---------------------- 73 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeee----------------------
Confidence 33344455556667777887765 56666777788888888888888666666666
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcccc-----------------------------------ccchh---HHHHHHHH
Q 019756 192 YQYLQISACGMAFGCFLIGLSFYLKEVKN-----------------------------------MNDAA---HILVLVGF 233 (336)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~---~~~~~~~~ 233 (336)
|.+++++++++.++-.+..+... ..... .+..++..
T Consensus 74 ------g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g 147 (539)
T PF03137_consen 74 ------GALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILG 147 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------cHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHH
Confidence 66666666666553211111000 00001 12333333
Q ss_pred HHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-----------------------hh
Q 019756 234 MGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-----------------------WS 290 (336)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-----------------------~~ 290 (336)
.++.+.++....++..+|+-|..+++.-+...|+......+|.+++-.+++...+ ..
T Consensus 148 q~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGA 227 (539)
T PF03137_consen 148 QLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGA 227 (539)
T ss_dssp ----SSS-------------------------------------------------------------------------
T ss_pred HHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHH
Confidence 3444455555567778999999999999999999999988888877777655432 02
Q ss_pred cchhhhHHHHHHHHHHHHHHhh
Q 019756 291 SAGTFFIFSGIGFFTVLFVAKI 312 (336)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~~~~ 312 (336)
|+..|++.+.+.++.++....|
T Consensus 228 WWLGfli~g~~~~l~aipl~~F 249 (539)
T PF03137_consen 228 WWLGFLICGILLFLSAIPLFFF 249 (539)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 5556667777766666654444
No 249
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.52 E-value=0.076 Score=46.24 Aligned_cols=144 Identities=15% Similarity=0.131 Sum_probs=81.4
Q ss_pred HHHHhHHHHHHHhCCCc-----hhHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchh
Q 019756 120 AMAYYTSSIFEKAGASG-----SIGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQY 194 (336)
Q Consensus 120 ~~~~~~~~~~~~~g~~~-----~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (336)
......+.+..+.+.+. ........+....+.+..|.+.||.|||+.+..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~------------------------- 74 (338)
T COG0477 20 LLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLII------------------------- 74 (338)
T ss_pred hHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHH-------------------------
Confidence 33344455555544332 255566666777777999999999999966655
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCc-cchhhhhHHHHH-HH
Q 019756 195 LQISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPI-NVKASAGSLVIL-IC 272 (336)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~-~~ 272 (336)
+......+........ . ......+......+.......+....++.|.+|. +.|+...+.... ..
T Consensus 75 ---~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (338)
T COG0477 75 ---GLLLFLLGTLLLALAP---N-------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAG 141 (338)
T ss_pred ---HHHHHHHHHHHHHhCc---c-------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Confidence 4433233322222211 0 0111222222222233324456678899999998 678888888877 56
Q ss_pred HHHHHHHHHHHHHHHHh---hcchhhhHHHHH
Q 019756 273 WSCSWIVTYTFNFMMQW---SSAGTFFIFSGI 301 (336)
Q Consensus 273 ~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~ 301 (336)
..|..+++.+.+.+... .|...+......
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 142 ALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 77777777666655543 454444443333
No 250
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.49 E-value=0.076 Score=52.88 Aligned_cols=170 Identities=10% Similarity=0.051 Sum_probs=113.4
Q ss_pred HHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 119 SAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 119 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
..+..-.+.+=+.++++.+ +.....-++..+..+...+...|..|-+.+-+
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~-------------------------- 167 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGI-------------------------- 167 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeee--------------------------
Confidence 4444445555556666654 45555667778888888888888888777777
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccc-------------c---------------------------ccchhHHHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVK-------------N---------------------------MNDAAHILVLVGFMG 235 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~---------------------------~~~~~~~~~~~~~~~ 235 (336)
|++++++++++.++--+..+.. . ......+..++...+
T Consensus 168 --G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~ 245 (735)
T KOG3626|consen 168 --GLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQL 245 (735)
T ss_pred --chhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHH
Confidence 8888888888877532111100 0 000113444455555
Q ss_pred HHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH----h----------------hcchhh
Q 019756 236 CSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ----W----------------SSAGTF 295 (336)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----~----------------~~~~~~ 295 (336)
+.+.+.....++..+|+-|...++.-....|+.+....+|-+++-.+++.+.+ . -|+..|
T Consensus 246 l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGF 325 (735)
T KOG3626|consen 246 LLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGF 325 (735)
T ss_pred HhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHH
Confidence 56666666677778999999888888888999999999999998888887764 1 245567
Q ss_pred hHHHHHHHHHHHHHHhhccCCC
Q 019756 296 FIFSGIGFFTVLFVAKIVPETK 317 (336)
Q Consensus 296 ~~~~~~~~~~~i~~~~~~~et~ 317 (336)
++.+.+.++..+..+++ |.+.
T Consensus 326 Li~g~~~~~~a~p~f~f-Pk~l 346 (735)
T KOG3626|consen 326 LICGALLLFSAVPLFFF-PKEL 346 (735)
T ss_pred HHHHHHHHHHHHHHHhC-cccC
Confidence 77777777777755554 5443
No 251
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.19 E-value=0.018 Score=52.08 Aligned_cols=76 Identities=13% Similarity=0.016 Sum_probs=55.3
Q ss_pred CccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-----------------hhcchhhhHHHHHHHHH
Q 019756 243 GLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-----------------WSSAGTFFIFSGIGFFT 305 (336)
Q Consensus 243 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-----------------~~~~~~~~~~~~~~~~~ 305 (336)
...+....+++++.|++.+++.+++...+..+|..++|.+.+.+.. ..|..++++.+.+..+.
T Consensus 26 ~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~ 105 (310)
T TIGR01272 26 ILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVL 105 (310)
T ss_pred HHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3456678999999999999999999999999999999999997763 24566777565554444
Q ss_pred HHHH-HhhccCCCC
Q 019756 306 VLFV-AKIVPETKG 318 (336)
Q Consensus 306 ~i~~-~~~~~et~~ 318 (336)
.++. ..-.||.++
T Consensus 106 ~i~~~~~~~p~~~~ 119 (310)
T TIGR01272 106 AIIFAFLPLPELQE 119 (310)
T ss_pred HHHHHHccCCCCCc
Confidence 4332 233466543
No 252
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.88 E-value=0.034 Score=52.69 Aligned_cols=39 Identities=8% Similarity=0.097 Sum_probs=30.6
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH
Q 019756 245 AGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTF 283 (336)
Q Consensus 245 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~ 283 (336)
.+....+..+..++++|-.+..+...+-.+|-..|+.+.
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667788888889998888888888888877777664
No 253
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.67 E-value=0.0089 Score=55.74 Aligned_cols=155 Identities=16% Similarity=0.122 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchhHHHH---HHHHHHHHHHHHHHhhhh----cCCceeeeeeccc
Q 019756 101 NSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSIGSRG---IAIIQIPAVITSVLLMDK----AGRKPLLMVITTS 173 (336)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~g~~~~~~l~dr----~grr~~l~~~~~~ 173 (336)
+.++....+....+++ +..-..|.|.+..+.|+...+.... .-+..++...+.|..+|| +|||+.++.+
T Consensus 32 ~~li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~--- 107 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFG-WALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILA--- 107 (498)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHH---
Confidence 3334444444455554 4445556666678888877644433 334456666778889995 7888887762
Q ss_pred ccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhh----cccc--ccchhHHHHHHHHHHHHHHhhcCccch
Q 019756 174 RTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLK----EVKN--MNDAAHILVLVGFMGCSAFNSIGLAGI 247 (336)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (336)
+.+..+++.+++...-... +... ....+....++++.+.-...... ...
T Consensus 108 ------------------------~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~-qgp 162 (498)
T KOG0637|consen 108 ------------------------GSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTL-QGP 162 (498)
T ss_pred ------------------------hhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhh-hhh
Confidence 5566667777666432221 1111 11123334444444444444433 344
Q ss_pred hhhhhcccCCccchhh-hhHHHHHHHHHHHHHHHHHHH
Q 019756 248 PFVIMSEIFPINVKAS-AGSLVILICWSCSWIVTYTFN 284 (336)
Q Consensus 248 ~~~~~~e~~p~~~r~~-~~~~~~~~~~~g~~~~~~~~~ 284 (336)
.-++..|+...+.+.+ +.+....+..+|+.++-.+.+
T Consensus 163 ~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 163 CRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 4799999986655555 999988888888887766654
No 254
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.53 E-value=0.15 Score=44.24 Aligned_cols=25 Identities=12% Similarity=0.227 Sum_probs=16.9
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHH
Q 019756 87 SEARLLNLFQRRYANSLIIGVGLML 111 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (336)
++.+..+.+|++..+...+......
T Consensus 83 ~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 83 KKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ccchHHHHHccchHHHHHHHHHHHh
Confidence 4467888898888777665544443
No 255
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.51 E-value=0.3 Score=45.65 Aligned_cols=127 Identities=9% Similarity=0.071 Sum_probs=74.6
Q ss_pred HHHhHHHHHHH-hCCCch-hH---HHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhh
Q 019756 121 MAYYTSSIFEK-AGASGS-IG---SRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYL 195 (336)
Q Consensus 121 ~~~~~~~~~~~-~g~~~~-~~---~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (336)
-++..|++.+. .|++.. .. .-...=..+...+....+.|..|.|++++.
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil-------------------------- 76 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIIL-------------------------- 76 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHH--------------------------
Confidence 34455555554 566654 11 111112345566677789999999999888
Q ss_pred hhhhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHH
Q 019756 196 QISACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSC 275 (336)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 275 (336)
+.+...+...++.+. .....+-..-++.+... ..-...++|+--..|+++--++.|......-+|
T Consensus 77 --~~~~~i~t~~lll~~------------~sv~~mq~~q~~yg~~~-a~evay~sYiys~v~~~~yq~vts~~raa~l~g 141 (412)
T PF01770_consen 77 --QALSYIITWLLLLFG------------TSVLAMQLMQFFYGLAT-AAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVG 141 (412)
T ss_pred --HHHHHHHHHHHHHHH------------CcHHHHHHHHHHHHHHH-HHHHHHHHHheeecCHHHHHHHHHHHHHHHHHH
Confidence 555544444443321 11111111221122111 112334577777778888888899999998899
Q ss_pred HHHHHHHHHHHHH
Q 019756 276 SWIVTYTFNFMMQ 288 (336)
Q Consensus 276 ~~~~~~~~~~l~~ 288 (336)
..++..++..+..
T Consensus 142 ~~~s~~lgQllvs 154 (412)
T PF01770_consen 142 RFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHHHHH
Confidence 8999988887776
No 256
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.31 E-value=0.53 Score=43.95 Aligned_cols=51 Identities=10% Similarity=-0.183 Sum_probs=36.8
Q ss_pred HHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 019756 237 SAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMM 287 (336)
Q Consensus 237 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 287 (336)
.+..+.......+..+.|-.|++.|-.++|.....-.+|..++..+.-++.
T Consensus 345 eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 345 EGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 333333333444566677789999999999999999999888888775544
No 257
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.22 E-value=0.11 Score=49.43 Aligned_cols=60 Identities=5% Similarity=-0.053 Sum_probs=45.6
Q ss_pred hhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHH
Q 019756 248 PFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVL 307 (336)
Q Consensus 248 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i 307 (336)
..++-+|+..++.++++.++.......+..++|........ .+..+...+..+..++...
T Consensus 409 ~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~ 469 (488)
T KOG2325|consen 409 LDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAA 469 (488)
T ss_pred HHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHH
Confidence 46788899999999999999999999999999988877777 5555555554444444433
No 258
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.63 E-value=1.5 Score=41.59 Aligned_cols=50 Identities=14% Similarity=0.127 Sum_probs=33.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHh
Q 019756 262 ASAGSLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAK 311 (336)
Q Consensus 262 ~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~ 311 (336)
....+...-+=.+..+++|.+.+.+.+ .+......+.++..+++..+=++
T Consensus 148 a~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 148 ARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334445689999999999988 66666667777777777665333
No 259
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=94.61 E-value=0.91 Score=42.37 Aligned_cols=126 Identities=11% Similarity=0.047 Sum_probs=70.8
Q ss_pred HHHHhHHHHHHHhCCCch-------hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccc
Q 019756 120 AMAYYTSSIFEKAGASGS-------IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGY 192 (336)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~-------~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (336)
.+..|......+.|.++. ....+.++...+-++.-|-++|+.|+||....
T Consensus 37 ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~----------------------- 93 (438)
T COG2270 37 IFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFG----------------------- 93 (438)
T ss_pred hhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHH-----------------------
Confidence 344444444555444432 33344445555566677789999998876654
Q ss_pred hhhhhhhhhh-HHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHH
Q 019756 193 QYLQISACGM-AFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILI 271 (336)
Q Consensus 193 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 271 (336)
.+... .++.+.+.+. ++ ..++...+.+.........+......+++.++.+++.-++..++....
T Consensus 94 -----~f~~i~i~~~~~L~~i---~~------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~ 159 (438)
T COG2270 94 -----FFTAIGIISTFLLWFI---PP------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWAL 159 (438)
T ss_pred -----HHHHHHHHHHHHHHHh---CC------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCccccccccc
Confidence 22222 2222222221 11 123444444444343333333445568899999888888888888888
Q ss_pred HHHHHHHHHHH
Q 019756 272 CWSCSWIVTYT 282 (336)
Q Consensus 272 ~~~g~~~~~~~ 282 (336)
+++|+.+.-..
T Consensus 160 gylgs~i~li~ 170 (438)
T COG2270 160 GYLGSVILLIF 170 (438)
T ss_pred ccccchHHHHH
Confidence 88887765554
No 260
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.54 E-value=3.6 Score=39.67 Aligned_cols=43 Identities=9% Similarity=-0.112 Sum_probs=37.9
Q ss_pred chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 246 GIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 246 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
-..|.+.+|.++.++..+-.++....+++|.+++..+.....+
T Consensus 163 lLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 163 LLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999998888776665
No 261
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=94.40 E-value=1.4 Score=40.22 Aligned_cols=65 Identities=12% Similarity=0.063 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch-----hHHHHHHHHHHHHHHHHHHhhhhcCCce
Q 019756 101 NSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS-----IGSRGIAIIQIPAVITSVLLMDKAGRKP 165 (336)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~~~g~~~~~~l~dr~grr~ 165 (336)
++.++...+.+....++++-..+|...+-++..-++. ..-.+..+.+.++.+..|.+.-.+.|..
T Consensus 233 np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g 302 (433)
T KOG3810|consen 233 NPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWG 302 (433)
T ss_pred CchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhh
Confidence 3344444455666666777888888888888753222 3445556667778888888877666653
No 262
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.28 E-value=0.012 Score=53.12 Aligned_cols=40 Identities=13% Similarity=0.093 Sum_probs=2.7
Q ss_pred ccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH
Q 019756 244 LAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTF 283 (336)
Q Consensus 244 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~ 283 (336)
..+....+..+..++++|..+..+....-.+|-.+|..+.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --HHHH----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566678888888888888887777777777766666554
No 263
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.18 E-value=0.21 Score=46.21 Aligned_cols=111 Identities=12% Similarity=-0.016 Sum_probs=71.9
Q ss_pred hhhhhHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCcc---chhhhhHHHHHHHHH
Q 019756 198 SACGMAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPIN---VKASAGSLVILICWS 274 (336)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~~~ 274 (336)
+.+...++.+++.+........ +........+++.. ...+..+.-+....+..|.++++ .|.++....+...++
T Consensus 7 g~~~~~~G~~ll~l~~~~~~~~--~~~~~~~~~~gL~l-ia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~ 83 (372)
T PF00854_consen 7 GSIVYLLGHVLLTLSAIPPSLP--SGIQLGLFYIGLAL-IAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI 83 (372)
T ss_dssp HHHHHHHHHHH--HHHTSSSC--------CHHHHHHHH-HHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHhcchhh--hhHHHHHHHHHHHH-HHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh
Confidence 6666777777755443322220 11122233344443 44445566677789999999765 467778888999999
Q ss_pred HHHHHHHHHHHHHH-hhcchhhhHHHHHHHHHHHHHHh
Q 019756 275 CSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVAK 311 (336)
Q Consensus 275 g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~ 311 (336)
|+.+++...+++.+ .+|...|.+.++..+++.+..+.
T Consensus 84 G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 84 GSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 99999999999887 88888888888877777665443
No 264
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.27 E-value=0.3 Score=45.36 Aligned_cols=40 Identities=13% Similarity=0.119 Sum_probs=26.6
Q ss_pred ccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH
Q 019756 244 LAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTF 283 (336)
Q Consensus 244 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~ 283 (336)
...+...+..+..|++++-.+..+....-..|...|..+.
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3556678888888888777766666666555555555443
No 265
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.11 E-value=1.5 Score=40.58 Aligned_cols=42 Identities=5% Similarity=-0.103 Sum_probs=36.2
Q ss_pred hhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 247 IPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 247 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
...+..+.+.|+..-|+-|.+.|...++|+-....+...+.|
T Consensus 389 ~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 389 SGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 346778899999999999999999999998888888777766
No 266
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=93.08 E-value=3.3 Score=40.80 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhh-cCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhcc
Q 019756 140 SRGIAIIQIPAVITSVLLMDK-AGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEV 218 (336)
Q Consensus 140 ~~~~~~~~~~g~~~~~~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (336)
....+-......+.+++++|. .||-+.+.+ +.++..++.+++......+..
T Consensus 79 v~~f~G~~~~~~l~g~~laD~f~gry~tI~~----------------------------~s~i~~~G~~~lt~~a~~~~l 130 (571)
T KOG1237|consen 79 VNAFGGTQFLLPLLGAFLADSFLGRYFTINI----------------------------GSLISLLGLFGLTLSAMIPAL 130 (571)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhHHHHHHHH----------------------------HHHHHHHHHHHHHHHHHhhhc
Confidence 333344456677889999996 488888887 777777776666655544422
Q ss_pred cc-----------ccchhH--HHHHHHHHHHHHHhhcCccchhhhhhcccCCc----cchh--hhhHHHHHHHHHHHHHH
Q 019756 219 KN-----------MNDAAH--ILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPI----NVKA--SAGSLVILICWSCSWIV 279 (336)
Q Consensus 219 ~~-----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~----~~r~--~~~~~~~~~~~~g~~~~ 279 (336)
.+ -+.... ...+...+.....+..|.-+....+-+|.++. +.+. .-....+...+.|.+++
T Consensus 131 ~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a 210 (571)
T KOG1237|consen 131 LPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLA 210 (571)
T ss_pred CCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHH
Confidence 11 011111 12222222223334455566777888888872 2223 55667777788888888
Q ss_pred HHHHHHHHH-hhcchhhhHHHHHHHHHHHHHH
Q 019756 280 TYTFNFMMQ-WSSAGTFFIFSGIGFFTVLFVA 310 (336)
Q Consensus 280 ~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~ 310 (336)
..+..+..+ .+|...|.+..+...++.++..
T Consensus 211 ~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 211 QTVLVYIQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred HHHHHhhhhcccceeeccHHHHHHHHHHHHHH
Confidence 888877755 7888888888777776666543
No 267
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=92.91 E-value=2.5 Score=39.15 Aligned_cols=66 Identities=17% Similarity=0.179 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCchhHHHHHHHHH--HHHHHHHHHhhh-----hcCCceeeee
Q 019756 101 NSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGSIGSRGIAIIQ--IPAVITSVLLMD-----KAGRKPLLMV 169 (336)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~g~~~~~~l~d-----r~grr~~l~~ 169 (336)
+...+..++...+.. .. .+..-.|.+++..|.|-+- ....+... .---+++..++| |+|||+.-++
T Consensus 31 ~~illLl~LYllQGi-P~-GL~~~iP~lL~ak~vSyt~-~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGI-PL-GLIGAIPLLLQAKGVSYTS-QAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred hhHHHHHHHHHHcCC-ch-hHhhhhHHHhcCCCcchhh-hhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceee
Confidence 344444445544432 23 3333778888866666541 11122222 223467778888 9999997766
No 268
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.61 E-value=1 Score=42.95 Aligned_cols=61 Identities=10% Similarity=-0.051 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 228 LVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
..++....++.+.+........+.-+.+..+.+-|+.|-+.|...++|+-....+.-++.|
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 3333333444444433333345677788889999999999999999998877766655554
No 269
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=92.59 E-value=0.37 Score=34.28 Aligned_cols=52 Identities=13% Similarity=-0.019 Sum_probs=43.1
Q ss_pred hHHHHHhHHHHHHHhCCCch---hHHHHHHHHHHHHHHHHHHhhhhcCCceeeee
Q 019756 118 ASAMAYYTSSIFEKAGASGS---IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMV 169 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~ 169 (336)
-+.+...+|.+.++.+++.+ +..+...++..+|++...++.++.+++..+..
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~ 62 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRA 62 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 45666778989999988876 77888889999999999999998777777777
No 270
>PRK03612 spermidine synthase; Provisional
Probab=91.37 E-value=4.5 Score=39.40 Aligned_cols=46 Identities=9% Similarity=0.112 Sum_probs=29.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHH
Q 019756 261 KASAGSLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTV 306 (336)
Q Consensus 261 r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~ 306 (336)
-+...|-.+....+|+++++.+.+.+.- .+...+..+.+.+.++++
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 3566778888888888888888876654 444444444444444443
No 271
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=90.51 E-value=17 Score=34.89 Aligned_cols=44 Identities=11% Similarity=-0.033 Sum_probs=38.0
Q ss_pred cchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 245 AGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 245 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
.-..|...+|++..++..+-.++.+..++++..++..+...+..
T Consensus 166 S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 166 SLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33568899999999999999999999999999998888777665
No 272
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=86.47 E-value=4.8 Score=37.66 Aligned_cols=129 Identities=12% Similarity=0.117 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhcccc
Q 019756 141 RGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKEVKN 220 (336)
Q Consensus 141 ~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (336)
..-.+-.++..+++.++.+|+.-+.-... ....+.+++++.++.
T Consensus 66 ladi~P~l~~Kl~aP~fi~~v~y~~Ri~~----------------------------~~~l~~~g~l~va~~-------- 109 (402)
T PF02487_consen 66 LADILPSLLVKLIAPFFIHRVPYWIRILI----------------------------CVALSAAGMLLVAFS-------- 109 (402)
T ss_pred HHHHHHHHHHHHHhHhhhhhccchHHHHH----------------------------HHHHHHHHHhheeec--------
Confidence 33344566777788899998753322233 344555555555432
Q ss_pred ccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHH
Q 019756 221 MNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIF 298 (336)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~ 298 (336)
...+.-+++..+.+... |.+-+.+.-.+..+|+. ..+-+......++++++...-.+.+ .+.+.++.+.
T Consensus 110 ---~~v~~~l~Gv~las~ss--g~GE~tfL~lt~~y~~~----~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~ 180 (402)
T PF02487_consen 110 ---PSVWVRLLGVVLASLSS--GLGEVTFLSLTHFYGKS----SLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIM 180 (402)
T ss_pred ---cchhHHHHHHHHHhhhh--hhhHHHHHHHHHhcCcc----ccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 11233334444333333 33344444445566643 2333333344455555555443333 3444566666
Q ss_pred HHHHHHHHHHHHhhcc
Q 019756 299 SGIGFFTVLFVAKIVP 314 (336)
Q Consensus 299 ~~~~~~~~i~~~~~~~ 314 (336)
..+.++..+..++.+|
T Consensus 181 ~~lp~~~~~~~f~~L~ 196 (402)
T PF02487_consen 181 LVLPAIFLLSYFFLLP 196 (402)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 6655544444444444
No 273
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.24 E-value=9.2 Score=36.53 Aligned_cols=105 Identities=10% Similarity=-0.121 Sum_probs=68.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhhc
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLKE 217 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
....+......+.+++++.+.|+.|.|+.+.+ +........... ..+
T Consensus 54 ~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~----------------------------ga~~y~~f~~gf----l~~- 100 (461)
T KOG3098|consen 54 YGQAIIYAFFTVSCLFAPSIVNFLGPKWALVI----------------------------GATCYAAFPLGF----LFP- 100 (461)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHH----------------------------HhHHHHHHHHHH----Hhc-
Confidence 45677777888999999999999999998877 443333322222 221
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHH
Q 019756 218 VKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTF 283 (336)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~ 283 (336)
+.+.....-...+.+.+.-+ .--..|++|..+.+.+.+..|+.-.+...+.+++....
T Consensus 101 -------N~y~~yfssallG~Gaallw-~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 101 -------NSYYLYFSSALLGFGAALLW-TGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred -------chHHHHHHHHHhhhhHHhee-cccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhh
Confidence 12333333333344433322 23358899999999999999998888888777775553
No 274
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=84.08 E-value=0.58 Score=44.97 Aligned_cols=54 Identities=11% Similarity=0.177 Sum_probs=41.4
Q ss_pred hhhHHHHHhHHHHHHHhCCCchh---HHHHHHHHHHHHHHHHHHhhhhcCCceeeee
Q 019756 116 GGASAMAYYTSSIFEKAGASGSI---GSRGIAIIQIPAVITSVLLMDKAGRKPLLMV 169 (336)
Q Consensus 116 ~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~ 169 (336)
.....+...++.+.+++|.++.. ....--+..+++..++|+++||+.+|+.+++
T Consensus 25 ~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lll 81 (618)
T KOG3762|consen 25 ARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLL 81 (618)
T ss_pred ecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhH
Confidence 34556677788889999999883 3334446788999999999999987766655
No 275
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=79.99 E-value=5.6 Score=37.70 Aligned_cols=32 Identities=16% Similarity=-0.035 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeee
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMV 169 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~ 169 (336)
+...+.++...+.++..-++.+|+|-|+.+..
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~ 367 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWG 367 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEee
Confidence 45556666677777888889999996666665
No 276
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=79.70 E-value=5.7 Score=35.10 Aligned_cols=23 Identities=26% Similarity=0.157 Sum_probs=17.4
Q ss_pred HHHHHHHHHHhhhhcCCceeeee
Q 019756 147 QIPAVITSVLLMDKAGRKPLLMV 169 (336)
Q Consensus 147 ~~~g~~~~~~l~dr~grr~~l~~ 169 (336)
.++...+.|-+.||-|||+..+.
T Consensus 85 smLFGtivgSLaDkqGRKracvt 107 (454)
T KOG4332|consen 85 SMLFGTIVGSLADKQGRKRACVT 107 (454)
T ss_pred HHHHHHHHHHHHhhhccccceee
Confidence 34455566779999999998776
No 277
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=79.36 E-value=0.42 Score=42.35 Aligned_cols=114 Identities=11% Similarity=-0.025 Sum_probs=71.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhh-cCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHhhh
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDK-AGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLSFYLK 216 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (336)
+..+..+.-+++-++++|++.|| +|-|..-++ -+....++-.+.+.-..
T Consensus 83 LlYsvYSwPNvVlcffgGflidr~fgir~gtii----------------------------~~~fv~~GqliFa~Ggi-- 132 (459)
T KOG4686|consen 83 LLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTII----------------------------LCIFVFLGQLIFAAGGI-- 132 (459)
T ss_pred eeeeeccCCCEEEeeecceeehhhhhhhHHHHH----------------------------HHHHHHHHHHHHHhchH--
Confidence 56666777788889999999997 465543333 22222223222221100
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 217 EVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
..+.|.+..+...++.+.- .....-..|.+-+|..+.-+.++|+.....++|..+--.+.+++.+
T Consensus 133 ------~~aFw~M~~GRF~FGIGgE-SlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~ 197 (459)
T KOG4686|consen 133 ------SHAFWTMLAGRFLFGIGGE-SLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYD 197 (459)
T ss_pred ------HHHHHHHHhhheeeccCch-hhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHH
Confidence 1234555555555444332 2233445778888999999999999999999998877667676665
No 278
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=79.05 E-value=29 Score=30.20 Aligned_cols=23 Identities=22% Similarity=0.210 Sum_probs=15.6
Q ss_pred HHHHHHHHHHhhhhcCCceeeee
Q 019756 147 QIPAVITSVLLMDKAGRKPLLMV 169 (336)
Q Consensus 147 ~~~g~~~~~~l~dr~grr~~l~~ 169 (336)
..+..+-+-+++.|+.-|++.+.
T Consensus 253 T~lAVigGk~lAskIS~rtVt~~ 275 (294)
T KOG2881|consen 253 TGLAVIGGKYLASKISVRTVTLI 275 (294)
T ss_pred HHHHHhhhHHHhhhheeEEEEEe
Confidence 33444444558889998888777
No 279
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=77.58 E-value=54 Score=30.78 Aligned_cols=16 Identities=0% Similarity=-0.124 Sum_probs=7.6
Q ss_pred hhHHHHHhHHHHHHHh
Q 019756 117 GASAMAYYTSSIFEKA 132 (336)
Q Consensus 117 ~~~~~~~~~~~~~~~~ 132 (336)
..+.+..-.+++.++.
T Consensus 33 pWN~fiTa~~y~~~~~ 48 (406)
T KOG1479|consen 33 PWNMFITASDYYYYRF 48 (406)
T ss_pred chHhhhccHHHHHhhc
Confidence 3444454455554443
No 280
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=75.97 E-value=78 Score=30.52 Aligned_cols=78 Identities=14% Similarity=0.021 Sum_probs=37.9
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhCCCch-------hHHHHHHHHHHHHHHHHHHhhhh
Q 019756 88 EARLLNLFQRRYANSLIIGVGLMLLQQFGGASAMAYYTSSIFEKAGASGS-------IGSRGIAIIQIPAVITSVLLMDK 160 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~~~~~~g~~~~~~l~dr 160 (336)
..+.+.++++++.+...+...+.... ....-..+-. ..++...++. ......++..++..++.+.+.+|
T Consensus 254 ~es~k~i~~S~yL~~ia~~vi~y~~~---~nlve~~~k~-~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~ 329 (472)
T TIGR00769 254 MESLKFLVSSPYILDLALLVIAYGIS---INLVEVTWKS-KLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRK 329 (472)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHH---HHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677777666554433332221 1111112222 2233222332 23334455555556666888888
Q ss_pred cCCceeeee
Q 019756 161 AGRKPLLMV 169 (336)
Q Consensus 161 ~grr~~l~~ 169 (336)
+|=+....+
T Consensus 330 ~Gw~~~a~i 338 (472)
T TIGR00769 330 YGWLTAALI 338 (472)
T ss_pred hhHHHHHHH
Confidence 887765544
No 281
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=75.42 E-value=25 Score=33.96 Aligned_cols=33 Identities=6% Similarity=-0.069 Sum_probs=20.5
Q ss_pred ccCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 019756 254 EIFPINVKASAGSLVILICWSCSWIVTYTFNFM 286 (336)
Q Consensus 254 e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 286 (336)
.+..++.++-|..........|-+++-.++-.+
T Consensus 145 T~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 145 TMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred hhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 344556677766666666667777666665443
No 282
>COG1422 Predicted membrane protein [Function unknown]
Probab=72.82 E-value=55 Score=27.31 Aligned_cols=25 Identities=20% Similarity=0.246 Sum_probs=12.9
Q ss_pred chHHHHHH-hHHHHHHHHHHHhcCCC
Q 019756 17 PWRILALI-GVIPCVLQLIGLFFIPE 41 (336)
Q Consensus 17 gWr~~f~i-~~i~~~i~~~~~~~lpE 41 (336)
+-.+.-++ +++.++...++..++-+
T Consensus 45 ~p~lvilV~avi~gl~~~i~~~~liD 70 (201)
T COG1422 45 PPHLVILVAAVITGLYITILQKLLID 70 (201)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44554444 44456655565555444
No 283
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=71.71 E-value=1e+02 Score=29.92 Aligned_cols=30 Identities=17% Similarity=0.245 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCceeeee
Q 019756 140 SRGIAIIQIPAVITSVLLMDKAGRKPLLMV 169 (336)
Q Consensus 140 ~~~~~~~~~~g~~~~~~l~dr~grr~~l~~ 169 (336)
....++..++..++++.+.+|+|=+....+
T Consensus 325 ~~~tGivtii~~~l~~~iir~~GW~~~Ali 354 (491)
T PF03219_consen 325 SSWTGIVTIIMMFLSSNIIRRFGWRTAALI 354 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 344455566666777888888887765544
No 284
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=67.08 E-value=10 Score=30.25 Aligned_cols=73 Identities=21% Similarity=0.150 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHHHHHHHH
Q 019756 202 MAFGCFLIGLSFYLKEVKNMNDAAHILVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILICWSCSWI 278 (336)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 278 (336)
.++++..+.++++...... .+..+|..++.-..+.+ .|...+.|..++-...++..|+..|+-.+-.+++-+.
T Consensus 73 ~~lG~~~f~~~y~l~~~~~-~dvP~~~~~~~S~~~Fg---~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 73 TALGVAVFVVFYYLKSRQI-VDVPPWAVLLVSLVFFG---LGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHHHHHHHHhccc-cccCchHHHHHHHHHHH---HHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3344444444444333322 22334444444333333 3333466777888888888899999988877776543
No 285
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=60.30 E-value=15 Score=27.93 Aligned_cols=12 Identities=25% Similarity=0.348 Sum_probs=7.9
Q ss_pred HHHHhcCCCChH
Q 019756 33 LIGLFFIPESPR 44 (336)
Q Consensus 33 ~~~~~~lpEsp~ 44 (336)
+++++.+|+.|.
T Consensus 57 i~l~~~lp~~P~ 68 (118)
T PRK10697 57 IILSFALDPMPD 68 (118)
T ss_pred HHHHHhccCCcc
Confidence 345667888774
No 286
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=58.24 E-value=10 Score=29.02 Aligned_cols=27 Identities=15% Similarity=0.260 Sum_probs=15.5
Q ss_pred hHHHHHHhHHHH-----HH-HHHHHhcCCCChH
Q 019756 18 WRILALIGVIPC-----VL-QLIGLFFIPESPR 44 (336)
Q Consensus 18 Wr~~f~i~~i~~-----~i-~~~~~~~lpEsp~ 44 (336)
.|.+|++..+++ ++ =+++++.+|+.|.
T Consensus 31 VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~ 63 (121)
T TIGR02978 31 VRILVVSALLFGGGFFVLVAYIALWLLLDKKPI 63 (121)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcc
Confidence 677777654432 22 2345667888774
No 287
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=56.44 E-value=1.1e+02 Score=24.90 Aligned_cols=27 Identities=11% Similarity=0.249 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCceee
Q 019756 141 RGIAIIQIPAVITSVLLMDKAGRKPLL 167 (336)
Q Consensus 141 ~~~~~~~~~g~~~~~~l~dr~grr~~l 167 (336)
....+...+.-.+.|++.-|++.++..
T Consensus 120 ~~s~~~~~~~L~ilG~~~a~~s~~~~~ 146 (169)
T TIGR00267 120 IVTVLLTLIALLVLGVYLGRISRENIL 146 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHH
Confidence 334444555556677777777666554
No 288
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=56.21 E-value=1.4e+02 Score=28.46 Aligned_cols=18 Identities=6% Similarity=-0.081 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHhhhhcCC
Q 019756 146 IQIPAVITSVLLMDKAGR 163 (336)
Q Consensus 146 ~~~~g~~~~~~l~dr~gr 163 (336)
..++..+....+..|+..
T Consensus 57 ~~l~~~~~~~~~~~~i~~ 74 (437)
T TIGR00939 57 PSLLFNSLNLFLIFRIPV 74 (437)
T ss_pred HHHHHHHHHHHHhhccCc
Confidence 334444444445555444
No 289
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=55.66 E-value=1.8e+02 Score=27.12 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH--hhcchhhhHHHHHHHHHH
Q 019756 265 GSLVILICWSCSWIVTYTFNFMMQ--WSSAGTFFIFSGIGFFTV 306 (336)
Q Consensus 265 ~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~ 306 (336)
.+.....-++|+..+....+++.- .|.-.+-...+.+.++++
T Consensus 141 ~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aA 184 (508)
T COG4262 141 GSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAA 184 (508)
T ss_pred hhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHH
Confidence 334444466777666666655443 233333334444444444
No 290
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=55.19 E-value=82 Score=23.16 Aligned_cols=32 Identities=19% Similarity=0.174 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCceeeee
Q 019756 138 IGSRGIAIIQIPAVITSVLLMDKAGRKPLLMV 169 (336)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~ 169 (336)
.......++..++....+.+.|..|.+..+..
T Consensus 91 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 122 (141)
T TIGR00880 91 LMSAGIALGPLLGPPLGGVLAQFLGWRAPFLF 122 (141)
T ss_pred HHHHhHHHHHHHhHHhHHHHhcccchHHHHHH
Confidence 45556667788888888888888776654443
No 291
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.00 E-value=82 Score=23.45 Aligned_cols=51 Identities=14% Similarity=0.194 Sum_probs=34.0
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHH---hhcchhhhHHHHHHHHHHHH
Q 019756 258 INVKASAGSLVILICWSCSWIVTYTFNFMMQ---WSSAGTFFIFSGIGFFTVLF 308 (336)
Q Consensus 258 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~i~ 308 (336)
++.++.+.++-...-.+++.+.....|++.+ ....|.++++..+.+++.++
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 4567778888777778888877777788888 33344455555555555443
No 292
>COG1288 Predicted membrane protein [Function unknown]
Probab=51.30 E-value=93 Score=29.48 Aligned_cols=20 Identities=10% Similarity=0.086 Sum_probs=13.4
Q ss_pred cchHHHHHHhHHHHHHHHHH
Q 019756 16 IPWRILALIGVIPCVLQLIG 35 (336)
Q Consensus 16 ~gWr~~f~i~~i~~~i~~~~ 35 (336)
.+||.+.++......+..+.
T Consensus 216 ~~~Riv~~v~~~~~~i~y~~ 235 (481)
T COG1288 216 MGLRIVVWVVFTLISIIYVY 235 (481)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 48999999866554444443
No 293
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=50.68 E-value=2e+02 Score=26.33 Aligned_cols=41 Identities=12% Similarity=-0.031 Sum_probs=28.4
Q ss_pred HHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHHHHHH
Q 019756 232 GFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLVILIC 272 (336)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 272 (336)
....+.........++......|.+|++..+..+|+.....
T Consensus 329 ~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~~~~ 369 (372)
T PF00854_consen 329 PMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWFALS 369 (372)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHHHHh
Confidence 44444555555566677778889999999888888877654
No 294
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=44.62 E-value=3.4e+02 Score=27.49 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=14.9
Q ss_pred chHHHHHHhHHHHHHHHHHH
Q 019756 17 PWRILALIGVIPCVLQLIGL 36 (336)
Q Consensus 17 gWr~~f~i~~i~~~i~~~~~ 36 (336)
+|...|.+.++..++.++..
T Consensus 159 ~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 159 CYPLAFGVPAILMILALIVF 178 (654)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 69999999887766665543
No 295
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=43.98 E-value=2e+02 Score=27.31 Aligned_cols=47 Identities=21% Similarity=0.309 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHH
Q 019756 143 IAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLS 212 (336)
Q Consensus 143 ~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (336)
.++.-+.-.+++-++.+...++++..+ |++.+|+.....-..+++++
T Consensus 300 YgiLFI~LTF~~fflfE~~~~~~iHpi-----------------------QY~LVGlAl~lFYlLLLSlS 346 (430)
T PF06123_consen 300 YGILFIGLTFLAFFLFELLSKLRIHPI-----------------------QYLLVGLALVLFYLLLLSLS 346 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccHH-----------------------HHHHHHHHHHHHHHHHHHHH
Confidence 334445556666778898899888876 77777776666666666554
No 296
>PRK11715 inner membrane protein; Provisional
Probab=43.07 E-value=2.2e+02 Score=27.11 Aligned_cols=47 Identities=26% Similarity=0.341 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhhhhcCCceeeeeecccccccccccccccccccccchhhhhhhhhhHHHHHHHHHH
Q 019756 143 IAIIQIPAVITSVLLMDKAGRKPLLMVITTSRTLFKMFDFVDQRGYENGYQYLQISACGMAFGCFLIGLS 212 (336)
Q Consensus 143 ~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (336)
.++.-+.-.+.+-++.+...++++..+ |++.+|+.....-+.+++++
T Consensus 306 YgiLFI~LTF~~fFlfE~~~~~~iHpi-----------------------QYlLVGlAl~lFYLLLLSlS 352 (436)
T PRK11715 306 YAILFIALTFAAFFLFELLKKLRIHPV-----------------------QYLLVGLALVLFYLLLLSLS 352 (436)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecHH-----------------------HHHHHHHHHHHHHHHHHHHH
Confidence 334445556666778899999988876 77777777766666666654
No 297
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=43.02 E-value=1.1e+02 Score=28.52 Aligned_cols=41 Identities=0% Similarity=-0.049 Sum_probs=32.9
Q ss_pred hhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 248 PFVIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 248 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
.++++-+..+++.+.++.|..-...-.|-..+......+..
T Consensus 115 YysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 115 YYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVS 155 (433)
T ss_pred hhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhh
Confidence 46777788899999999999888877787777777776666
No 298
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=41.54 E-value=2.2e+02 Score=24.20 Aligned_cols=47 Identities=11% Similarity=0.080 Sum_probs=25.5
Q ss_pred hHHHHHhHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHhhhhcCCceeee
Q 019756 118 ASAMAYYTSSIFEKAGASGSIGSRGIAIIQIPAVITSVLLMDKAGRKPLLM 168 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~ 168 (336)
...+...+|+++.. .........+...+.-.+.|.+.-|+++++...
T Consensus 149 lg~liPllpy~~~~----~~~~~~~s~~~~~~aL~~~G~~~a~~~~~~~~~ 195 (218)
T cd02432 149 VGALLPLLAILLAP----AAWKVPVTIIATLLALALTGYVSARLGGASVLR 195 (218)
T ss_pred HHHHHHHHHHHHhc----chHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Confidence 33455555665422 122233334446666677778888877766543
No 299
>PRK10263 DNA translocase FtsK; Provisional
Probab=40.95 E-value=2e+02 Score=31.57 Aligned_cols=19 Identities=16% Similarity=0.086 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHhhhhcC
Q 019756 144 AIIQIPAVITSVLLMDKAG 162 (336)
Q Consensus 144 ~~~~~~g~~~~~~l~dr~g 162 (336)
+.++.+|..++..+..-+|
T Consensus 62 Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 3445555555555544444
No 300
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=39.92 E-value=1.6e+02 Score=22.12 Aligned_cols=40 Identities=18% Similarity=0.027 Sum_probs=26.6
Q ss_pred HHhCCCchhHHHHHHHHHHHHHHHHHHhhhhcCCceeeee
Q 019756 130 EKAGASGSIGSRGIAIIQIPAVITSVLLMDKAGRKPLLMV 169 (336)
Q Consensus 130 ~~~g~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~ 169 (336)
...+.++........+..+++.+.+|+.+-|..++|-...
T Consensus 30 ~~~~~~e~~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~ 69 (116)
T PF12670_consen 30 YFTSLSESILPWLVVIIYILSVFIGGFYAGRKAGSKGWLH 69 (116)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 3345666666667777788888888887776554444443
No 301
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=37.35 E-value=2.8e+02 Score=25.35 Aligned_cols=9 Identities=22% Similarity=0.390 Sum_probs=4.1
Q ss_pred hhhHHHHHh
Q 019756 4 FGCSLAYFF 12 (336)
Q Consensus 4 ~G~~l~~~l 12 (336)
+|..++..+
T Consensus 17 lgQ~lsl~~ 25 (334)
T PF06027_consen 17 LGQVLSLCI 25 (334)
T ss_pred HHHHHHHHH
Confidence 444444443
No 302
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=35.79 E-value=2.7e+02 Score=23.47 Aligned_cols=48 Identities=8% Similarity=-0.017 Sum_probs=25.2
Q ss_pred hHHHHHhHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHhhhhcCCceeee
Q 019756 118 ASAMAYYTSSIFEKAGASGSIGSRGIAIIQIPAVITSVLLMDKAGRKPLLM 168 (336)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~ 168 (336)
...+...+|+++.. +. ........+..++.-.+.|....|+..++...
T Consensus 144 lg~liPllp~~~~~-~~--~~a~~~s~~~~~~~L~~~G~~~a~~~~~~~~~ 191 (213)
T PF01988_consen 144 LGGLIPLLPYFFLP-SV--SEAFIASIAVTILALFILGYFKARISGQSWWR 191 (213)
T ss_pred HHHHHHHHHHHHhh-hH--HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 33455556665543 11 13333444445556666677777776665443
No 303
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=35.68 E-value=1e+02 Score=20.01 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=25.0
Q ss_pred HHHHhhCccchHHHHHHhHHHHHHHHHHHhcCCCCh
Q 019756 8 LAYFFGNVIPWRILALIGVIPCVLQLIGLFFIPESP 43 (336)
Q Consensus 8 l~~~l~~~~gWr~~f~i~~i~~~i~~~~~~~lpEsp 43 (336)
.+..-+..++.+....++.+.+++...+.-.+|+++
T Consensus 21 ~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 21 GSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 333344566788888888888888877776776654
No 304
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=35.53 E-value=1.1e+02 Score=22.74 Aligned_cols=29 Identities=14% Similarity=0.295 Sum_probs=20.3
Q ss_pred ccchHHHHHHhHHHHH-HHHHHHhcCCCCh
Q 019756 15 VIPWRILALIGVIPCV-LQLIGLFFIPESP 43 (336)
Q Consensus 15 ~~gWr~~f~i~~i~~~-i~~~~~~~lpEsp 43 (336)
..+|+.+|+++...++ ++.+.+.+.||+.
T Consensus 56 ~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 56 WEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3489999999665554 4456667778865
No 305
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=35.20 E-value=56 Score=25.55 Aligned_cols=24 Identities=25% Similarity=0.311 Sum_probs=18.6
Q ss_pred hhcccCCccchhhhhHHHHHHHHH
Q 019756 251 IMSEIFPINVKASAGSLVILICWS 274 (336)
Q Consensus 251 ~~~e~~p~~~r~~~~~~~~~~~~~ 274 (336)
-+.|++|+..|....+..+...+.
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHH
Confidence 368999999999888777765444
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.67 E-value=53 Score=24.45 Aligned_cols=23 Identities=26% Similarity=0.250 Sum_probs=14.8
Q ss_pred HHHHHHHHHHhhhhc-CCceeeee
Q 019756 147 QIPAVITSVLLMDKA-GRKPLLMV 169 (336)
Q Consensus 147 ~~~g~~~~~~l~dr~-grr~~l~~ 169 (336)
+++.....||+.||+ |.++..++
T Consensus 55 GilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHH
Confidence 444455667888886 67766554
No 307
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=32.73 E-value=4.8e+02 Score=25.50 Aligned_cols=24 Identities=25% Similarity=0.098 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCce
Q 019756 142 GIAIIQIPAVITSVLLMDKAGRKP 165 (336)
Q Consensus 142 ~~~~~~~~g~~~~~~l~dr~grr~ 165 (336)
...+.+.++..+++.+-..+|.|+
T Consensus 305 ~y~~~~~iaGy~S~~~yk~~~g~~ 328 (521)
T PF02990_consen 305 LYALTSFIAGYVSARLYKSFGGKK 328 (521)
T ss_pred HHHHHhhHHHHHHHHHHHHcCCCc
Confidence 333444555555555555566544
No 308
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=32.37 E-value=15 Score=32.27 Aligned_cols=58 Identities=5% Similarity=0.148 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHH---HHHHhhcchhhhHHHHHHHHHHHHHHhhccCCCC
Q 019756 261 KASAGSLVILICWSCSWIVTYTFN---FMMQWSSAGTFFIFSGIGFFTVLFVAKIVPETKG 318 (336)
Q Consensus 261 r~~~~~~~~~~~~~g~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~et~~ 318 (336)
|--+.+++...+.+-+++..++.- .+....|+....=.--+.++.+++.|+++-+++.
T Consensus 130 r~~GAs~WtiLaFcLAF~LaivlLIIAv~L~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 130 RELGASFWTILAFCLAFLLAIVLLIIAVLLHQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp -------------------------------------------------------------
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 444555555555444443333322 2222333322211111223334456666655543
No 309
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=31.20 E-value=79 Score=24.87 Aligned_cols=23 Identities=9% Similarity=-0.022 Sum_probs=17.8
Q ss_pred hhcccCCccchhhhhHHHHHHHH
Q 019756 251 IMSEIFPINVKASAGSLVILICW 273 (336)
Q Consensus 251 ~~~e~~p~~~r~~~~~~~~~~~~ 273 (336)
-+.|++|+..|....+..+....
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHH
Confidence 36799999999988777666544
No 310
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function. Proteins usually have between 6 and 9 predicted transmembrane segments.
Probab=30.23 E-value=3.8e+02 Score=23.52 Aligned_cols=17 Identities=12% Similarity=0.194 Sum_probs=9.1
Q ss_pred HHHHHHhhhhhHHHHHH
Q 019756 89 ARLLNLFQRRYANSLII 105 (336)
Q Consensus 89 ~~~~~~~~~~~~~~~~~ 105 (336)
..+++.+++.+.+.+..
T Consensus 43 ~~~~~~~~~~~~~fL~~ 59 (257)
T PF04018_consen 43 GRFKEAWKKINLKFLLP 59 (257)
T ss_pred HHHHHHHHhhcHHHHHH
Confidence 34566666555554443
No 311
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=29.66 E-value=4.1e+02 Score=23.92 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhhcCccchhhhhhcccCCccchhhhhHHH
Q 019756 228 LVLVGFMGCSAFNSIGLAGIPFVIMSEIFPINVKASAGSLV 268 (336)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 268 (336)
..+++++.+-...+.-+ |-..-+=+...|.+.|++.+-..
T Consensus 346 ~s~i~F~~~E~cvGlfw-PSimkmRsqyIPEearstimNfF 385 (454)
T KOG4332|consen 346 ESLIGFCLFEACVGLFW-PSIMKMRSQYIPEEARSTIMNFF 385 (454)
T ss_pred HHHHHHHHHHHHHhhcc-hHHHHHHHhhCCHHHHhhhhhhe
Confidence 33566666555555543 33346667788999998866544
No 312
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=25.97 E-value=6.2e+02 Score=24.64 Aligned_cols=22 Identities=9% Similarity=0.074 Sum_probs=12.3
Q ss_pred HHHHHHHHHHhhhhcCCceeee
Q 019756 147 QIPAVITSVLLMDKAGRKPLLM 168 (336)
Q Consensus 147 ~~~g~~~~~~l~dr~grr~~l~ 168 (336)
.++....++-+..|.|=....+
T Consensus 335 ~v~~~~~~s~~ir~~GW~~~Al 356 (509)
T COG3202 335 LVVFLFPGSNLIRRVGWFTGAL 356 (509)
T ss_pred HHHHHhhhHHHHHHhhHHHHHH
Confidence 3444556666777766554333
No 313
>COG3462 Predicted membrane protein [Function unknown]
Probab=24.24 E-value=3.1e+02 Score=20.48 Aligned_cols=14 Identities=29% Similarity=0.330 Sum_probs=8.1
Q ss_pred HHHHHHHHHHhCCC
Q 019756 53 KEFETTLQNLRGKG 66 (336)
Q Consensus 53 ~~a~~~~~~~~~~~ 66 (336)
++|++.+++-..++
T Consensus 88 sRA~eIlkER~AkG 101 (117)
T COG3462 88 SRAEEILKERYAKG 101 (117)
T ss_pred cHHHHHHHHHHhcC
Confidence 56666666555444
No 314
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=23.38 E-value=3.4e+02 Score=25.68 Aligned_cols=39 Identities=10% Similarity=0.026 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hhcchhhhHHHHHHHH
Q 019756 266 SLVILICWSCSWIVTYTFNFMMQ-WSSAGTFFIFSGIGFF 304 (336)
Q Consensus 266 ~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~ 304 (336)
+..-..-..-..++|.+.|.+.. .+....-.++++..++
T Consensus 178 atir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 178 ATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 44444455678889998888877 3334434444444444
No 315
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=22.30 E-value=3e+02 Score=19.64 Aligned_cols=48 Identities=8% Similarity=0.013 Sum_probs=24.2
Q ss_pred HHHHHHhhhhHHHHHhHHHHHHHhCC-CchhHHHHHHHHHHHHHHHHHH
Q 019756 109 LMLLQQFGGASAMAYYTSSIFEKAGA-SGSIGSRGIAIIQIPAVITSVL 156 (336)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~g~~~~~~ 156 (336)
...+..+.+...+..+.|.++...=. +........+++.++.+....+
T Consensus 23 ~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~~~~~~l~~ 71 (91)
T PF04341_consen 23 AIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQIVFAWVLTW 71 (91)
T ss_pred HHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHHHHHHHHHH
Confidence 33344444566777888888765322 2112334444455544444333
No 316
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=21.66 E-value=1.4e+02 Score=22.14 Aligned_cols=31 Identities=13% Similarity=-0.104 Sum_probs=21.6
Q ss_pred hhcchhhhHHHHHHHHHHHHHHhhccCCCCC
Q 019756 289 WSSAGTFFIFSGIGFFTVLFVAKIVPETKGR 319 (336)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~i~~~~~~~et~~~ 319 (336)
.+|..++++...++++.+.+.+.+.|++.-+
T Consensus 57 e~we~~~f~~~~~~~v~~~~~~~y~PD~~i~ 87 (105)
T PF10183_consen 57 EGWELPFFFGFSGSLVFGGVFLAYKPDTSIQ 87 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence 5677777776666666666667777888754
No 317
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=20.89 E-value=2.4e+02 Score=26.03 Aligned_cols=27 Identities=19% Similarity=0.196 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHhhhhcCCceeeee
Q 019756 143 IAIIQIPAVITSVLLMDKAGRKPLLMV 169 (336)
Q Consensus 143 ~~~~~~~g~~~~~~l~dr~grr~~l~~ 169 (336)
.....+..+++.+.+++++|.|+.+..
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~l 93 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVL 93 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 344455666667789999999987655
No 318
>PRK09609 hypothetical protein; Provisional
Probab=20.54 E-value=6.4e+02 Score=22.81 Aligned_cols=38 Identities=13% Similarity=0.287 Sum_probs=16.5
Q ss_pred chHHHHHHhH-HHHHHH-HHHHhcCCCChHHHHhcCCHHH
Q 019756 17 PWRILALIGV-IPCVLQ-LIGLFFIPESPRWLVKIGKEKE 54 (336)
Q Consensus 17 gWr~~f~i~~-i~~~i~-~~~~~~lpEsp~~l~~~~~~~~ 54 (336)
.|...|.+.+ +.+++. ++.+++..--.+|..++.|.++
T Consensus 77 ~ffPgFTLsa~l~GlI~Glf~~~~fk~~~~~f~~~~~~~~ 116 (312)
T PRK09609 77 VYHPYYTLAAMVYGFIPGIVGWFFFKFGKKFFGKESRIKR 116 (312)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3555565533 333332 2333333344555544444333
No 319
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=20.54 E-value=3.4e+02 Score=26.92 Aligned_cols=39 Identities=13% Similarity=0.137 Sum_probs=32.3
Q ss_pred hhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019756 250 VIMSEIFPINVKASAGSLVILICWSCSWIVTYTFNFMMQ 288 (336)
Q Consensus 250 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 288 (336)
-+.-+-+|++.|+.++++......+|..+...+......
T Consensus 481 EFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~ 519 (571)
T KOG1237|consen 481 EFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQF 519 (571)
T ss_pred HHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456799999999999999999999999998866555
Done!