Query 019759
Match_columns 336
No_of_seqs 125 out of 1275
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 06:41:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019759.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019759hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4E-47 1.4E-51 356.4 19.5 311 7-336 12-331 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 3.6E-39 1.2E-43 306.4 24.0 319 7-336 5-342 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.1E-39 7.1E-44 308.8 19.3 324 1-336 1-357 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 7.4E-39 2.5E-43 302.5 18.8 316 1-335 1-328 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.5E-37 5E-42 294.3 20.7 310 7-335 8-335 (463)
6 2iya_A OLEI, oleandomycin glyc 99.9 2.8E-23 9.7E-28 194.4 18.1 272 7-309 11-294 (424)
7 1iir_A Glycosyltransferase GTF 99.9 1.6E-21 5.6E-26 182.0 10.6 256 9-309 1-276 (415)
8 4amg_A Snogd; transferase, pol 99.8 2E-21 6.8E-26 180.1 10.6 248 6-310 20-279 (400)
9 1rrv_A Glycosyltransferase GTF 99.8 5E-20 1.7E-24 171.9 12.9 259 9-310 1-278 (416)
10 2iyf_A OLED, oleandomycin glyc 99.8 1.3E-18 4.6E-23 162.8 18.8 260 8-309 7-272 (430)
11 3rsc_A CALG2; TDP, enediyne, s 99.8 1.5E-17 5.1E-22 154.9 17.8 259 8-309 20-286 (415)
12 3ia7_A CALG4; glycosysltransfe 99.8 2.6E-17 9E-22 152.3 18.2 257 9-309 5-270 (402)
13 3h4t_A Glycosyltransferase GTF 99.7 1.1E-17 3.7E-22 155.6 9.5 253 9-310 1-260 (404)
14 2p6p_A Glycosyl transferase; X 99.7 3.3E-16 1.1E-20 144.3 14.6 237 9-308 1-253 (384)
15 2yjn_A ERYCIII, glycosyltransf 99.6 2.3E-15 7.7E-20 141.5 11.6 252 8-309 20-309 (441)
16 3oti_A CALG3; calicheamicin, T 99.6 1.9E-14 6.4E-19 133.3 14.0 240 6-310 18-274 (398)
17 4fzr_A SSFS6; structural genom 99.5 2E-14 6.7E-19 133.1 6.6 243 6-309 13-274 (398)
18 3otg_A CALG1; calicheamicin, T 99.4 5.1E-12 1.7E-16 117.1 17.9 240 6-310 18-282 (412)
19 3tsa_A SPNG, NDP-rhamnosyltran 99.4 1.4E-12 4.6E-17 120.3 13.4 236 8-309 1-260 (391)
20 3s2u_A UDP-N-acetylglucosamine 98.6 1.6E-07 5.3E-12 85.7 10.7 116 9-140 3-122 (365)
21 2o6l_A UDP-glucuronosyltransfe 97.8 1.7E-05 6E-10 63.6 4.3 55 255-309 6-61 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 97.7 0.00017 5.7E-09 65.0 10.7 117 9-141 7-127 (364)
23 3fro_A GLGA glycogen synthase; 96.8 0.017 5.7E-07 52.8 12.8 40 7-46 1-45 (439)
24 3c48_A Predicted glycosyltrans 96.2 0.015 5E-07 53.5 8.6 121 7-142 19-154 (438)
25 2jjm_A Glycosyl transferase, g 96.1 0.086 2.9E-06 47.5 13.1 114 8-142 15-134 (394)
26 2r60_A Glycosyl transferase, g 96.0 0.031 1.1E-06 52.4 9.8 122 8-142 7-152 (499)
27 2iuy_A Avigt4, glycosyltransfe 94.9 0.067 2.3E-06 47.2 7.6 92 8-140 3-110 (342)
28 2gek_A Phosphatidylinositol ma 94.8 0.16 5.4E-06 45.8 10.2 115 7-142 19-139 (406)
29 2iw1_A Lipopolysaccharide core 93.1 0.43 1.5E-05 42.3 9.4 84 10-120 2-88 (374)
30 3okp_A GDP-mannose-dependent a 93.0 0.2 6.8E-06 44.8 7.0 106 8-139 4-115 (394)
31 3s28_A Sucrose synthase 1; gly 91.3 0.67 2.3E-05 46.3 9.0 126 9-141 279-438 (816)
32 2wqk_A 5'-nucleotidase SURE; S 90.5 2.5 8.5E-05 35.7 10.6 113 10-142 3-128 (251)
33 3vue_A GBSS-I, granule-bound s 90.3 0.28 9.7E-06 46.5 5.1 45 1-45 1-52 (536)
34 1vgv_A UDP-N-acetylglucosamine 89.7 0.47 1.6E-05 42.3 5.9 111 10-140 2-117 (384)
35 1v4v_A UDP-N-acetylglucosamine 88.9 1.3 4.3E-05 39.4 8.1 111 9-139 6-121 (376)
36 1g5t_A COB(I)alamin adenosyltr 88.0 3.8 0.00013 33.1 9.5 40 7-46 27-66 (196)
37 2phj_A 5'-nucleotidase SURE; S 87.1 8.2 0.00028 32.4 11.3 114 9-142 2-128 (251)
38 3beo_A UDP-N-acetylglucosamine 87.1 2.5 8.6E-05 37.2 8.9 112 8-139 8-125 (375)
39 3dzc_A UDP-N-acetylglucosamine 87.0 0.7 2.4E-05 41.9 5.2 115 6-140 23-142 (396)
40 3hbm_A UDP-sugar hydrolase; PS 86.0 1.5 5.3E-05 37.7 6.5 86 16-140 12-100 (282)
41 2x0d_A WSAF; GT4 family, trans 84.7 0.64 2.2E-05 42.4 3.7 41 6-46 44-89 (413)
42 3ot5_A UDP-N-acetylglucosamine 84.0 1.7 5.8E-05 39.4 6.2 113 8-140 27-145 (403)
43 2x6q_A Trehalose-synthase TRET 80.3 2.5 8.4E-05 38.0 5.8 39 7-45 39-79 (416)
44 3to5_A CHEY homolog; alpha(5)b 79.7 3.1 0.00011 31.3 5.3 37 107-143 52-97 (134)
45 2lpm_A Two-component response 77.7 2.1 7.2E-05 31.7 3.7 36 106-141 47-87 (123)
46 1rzu_A Glycogen synthase 1; gl 76.8 2.2 7.6E-05 39.3 4.5 36 10-45 2-43 (485)
47 2qzs_A Glycogen synthase; glyc 75.8 2.5 8.6E-05 38.9 4.6 36 10-45 2-43 (485)
48 1l5x_A SurviVal protein E; str 73.4 11 0.00039 32.1 7.6 113 10-142 2-128 (280)
49 1psw_A ADP-heptose LPS heptosy 73.4 13 0.00045 32.3 8.5 102 10-139 2-108 (348)
50 4hwg_A UDP-N-acetylglucosamine 72.5 5.8 0.0002 35.6 6.0 111 9-140 10-124 (385)
51 2yxb_A Coenzyme B12-dependent 71.2 4.2 0.00014 31.7 4.1 39 6-44 16-54 (161)
52 3gl9_A Response regulator; bet 70.7 8.8 0.0003 27.4 5.7 37 106-142 40-85 (122)
53 2r8r_A Sensor protein; KDPD, P 64.6 15 0.00053 30.3 6.4 42 6-47 4-45 (228)
54 2i2x_B MTAC, methyltransferase 64.0 13 0.00045 31.3 6.1 40 6-45 121-160 (258)
55 1y80_A Predicted cobalamin bin 63.8 9.1 0.00031 31.0 4.9 39 7-45 87-125 (210)
56 3ty2_A 5'-nucleotidase SURE; s 63.6 25 0.00087 29.6 7.6 47 1-49 4-50 (261)
57 3t6k_A Response regulator rece 61.6 16 0.00053 26.6 5.6 37 106-142 42-87 (136)
58 3m6m_D Sensory/regulatory prot 61.4 11 0.00039 27.8 4.8 37 106-142 52-99 (143)
59 3f6p_A Transcriptional regulat 60.2 17 0.00058 25.7 5.5 37 106-142 40-82 (120)
60 3vot_A L-amino acid ligase, BL 59.5 75 0.0026 28.4 10.8 34 7-45 4-37 (425)
61 1ccw_A Protein (glutamate muta 59.5 15 0.0005 27.5 5.0 37 8-44 3-39 (137)
62 3tov_A Glycosyl transferase fa 59.2 64 0.0022 28.2 10.0 102 9-137 9-114 (349)
63 3zqu_A Probable aromatic acid 58.3 16 0.00056 29.7 5.4 37 9-46 5-41 (209)
64 3ezx_A MMCP 1, monomethylamine 58.0 12 0.00042 30.5 4.7 40 6-45 90-129 (215)
65 3lqk_A Dipicolinate synthase s 57.1 23 0.00079 28.6 6.1 38 9-47 8-46 (201)
66 1mvl_A PPC decarboxylase athal 56.2 18 0.00061 29.4 5.3 39 8-48 19-57 (209)
67 2jzc_A UDP-N-acetylglucosamine 55.8 13 0.00044 30.6 4.5 42 268-310 26-73 (224)
68 3mc3_A DSRE/DSRF-like family p 54.3 17 0.00057 27.1 4.5 28 18-45 28-55 (134)
69 3qjg_A Epidermin biosynthesis 52.0 21 0.00073 28.1 5.0 39 9-48 6-44 (175)
70 3c3m_A Response regulator rece 51.7 28 0.00095 25.2 5.5 37 106-142 41-86 (138)
71 1id1_A Putative potassium chan 51.3 13 0.00045 28.1 3.6 33 8-45 3-35 (153)
72 2lci_A Protein OR36; structura 51.1 13 0.00044 25.6 3.0 44 283-335 59-102 (134)
73 1dbw_A Transcriptional regulat 50.8 31 0.0011 24.3 5.6 37 106-142 41-84 (126)
74 3gt7_A Sensor protein; structu 50.4 28 0.00097 25.8 5.5 38 105-142 44-90 (154)
75 4g6h_A Rotenone-insensitive NA 48.2 10 0.00034 35.4 2.9 37 5-46 39-75 (502)
76 3b2n_A Uncharacterized protein 47.8 32 0.0011 24.6 5.2 37 106-142 43-86 (133)
77 3cg0_A Response regulator rece 47.1 34 0.0012 24.5 5.4 38 106-143 48-92 (140)
78 1zgz_A Torcad operon transcrip 47.0 36 0.0012 23.7 5.4 39 104-142 38-82 (122)
79 1tmy_A CHEY protein, TMY; chem 46.8 37 0.0013 23.6 5.4 36 107-142 42-84 (120)
80 3h1g_A Chemotaxis protein CHEY 46.2 41 0.0014 23.8 5.6 32 111-142 50-90 (129)
81 3nhm_A Response regulator; pro 46.1 42 0.0014 23.8 5.7 37 106-142 41-86 (133)
82 3a10_A Response regulator; pho 46.0 48 0.0016 22.7 5.9 36 107-142 40-82 (116)
83 2rjn_A Response regulator rece 45.4 37 0.0013 25.0 5.4 39 105-143 44-89 (154)
84 2a9o_A Response regulator; ess 44.9 44 0.0015 23.0 5.5 37 107-143 40-82 (120)
85 2gk4_A Conserved hypothetical 44.9 16 0.00056 30.2 3.4 21 26-46 33-53 (232)
86 3hv2_A Response regulator/HD d 44.9 35 0.0012 25.2 5.2 38 105-142 51-95 (153)
87 3eod_A Protein HNR; response r 44.7 38 0.0013 23.9 5.2 38 106-143 45-89 (130)
88 4e7p_A Response regulator; DNA 44.6 40 0.0014 24.7 5.5 39 104-142 58-103 (150)
89 3mcu_A Dipicolinate synthase, 44.6 28 0.00096 28.2 4.7 37 9-46 6-43 (207)
90 1xhf_A DYE resistance, aerobic 44.2 46 0.0016 23.1 5.6 37 106-142 41-83 (123)
91 1srr_A SPO0F, sporulation resp 44.1 37 0.0013 23.8 5.1 36 107-142 42-84 (124)
92 2xvy_A Chelatase, putative; me 44.0 24 0.00083 29.6 4.5 40 269-308 9-50 (269)
93 3rqi_A Response regulator prot 44.0 27 0.00093 27.0 4.6 38 106-143 45-89 (184)
94 2qxy_A Response regulator; reg 43.9 37 0.0013 24.5 5.1 37 105-142 41-84 (142)
95 3i42_A Response regulator rece 43.7 38 0.0013 23.8 5.1 38 104-141 39-85 (127)
96 1mb3_A Cell division response 43.2 37 0.0013 23.7 4.9 35 107-141 40-83 (124)
97 2qzj_A Two-component response 42.2 38 0.0013 24.4 4.9 37 106-142 42-84 (136)
98 3cu5_A Two component transcrip 41.8 42 0.0015 24.3 5.2 35 107-141 44-85 (141)
99 2pl1_A Transcriptional regulat 41.5 57 0.002 22.5 5.7 37 106-142 38-81 (121)
100 2hy7_A Glucuronosyltransferase 41.2 20 0.00068 32.2 3.7 36 8-45 14-52 (406)
101 1qzu_A Hypothetical protein MD 40.7 35 0.0012 27.6 4.7 41 8-49 19-60 (206)
102 1p6q_A CHEY2; chemotaxis, sign 40.7 44 0.0015 23.5 5.0 37 106-142 45-90 (129)
103 2qr3_A Two-component system re 40.6 44 0.0015 23.9 5.1 38 106-143 41-90 (140)
104 1sbz_A Probable aromatic acid 40.4 41 0.0014 27.0 5.0 36 10-46 2-38 (197)
105 3kht_A Response regulator; PSI 40.4 55 0.0019 23.6 5.7 38 105-142 44-90 (144)
106 3cfy_A Putative LUXO repressor 40.2 47 0.0016 23.9 5.2 36 107-142 43-85 (137)
107 3grc_A Sensor protein, kinase; 39.9 37 0.0013 24.4 4.6 38 106-143 44-90 (140)
108 3crn_A Response regulator rece 39.8 53 0.0018 23.3 5.4 37 106-142 41-84 (132)
109 2rdm_A Response regulator rece 39.7 58 0.002 22.9 5.6 38 105-142 42-88 (132)
110 4dad_A Putative pilus assembly 39.4 30 0.001 25.2 4.0 40 103-142 57-104 (146)
111 3eul_A Possible nitrate/nitrit 39.0 47 0.0016 24.3 5.1 39 104-142 53-98 (152)
112 3lte_A Response regulator; str 38.8 58 0.002 22.9 5.5 25 106-130 44-70 (132)
113 3n53_A Response regulator rece 38.1 37 0.0012 24.5 4.3 37 106-142 40-85 (140)
114 2r25_B Osmosensing histidine p 38.1 67 0.0023 22.9 5.7 32 111-142 51-90 (133)
115 1jbe_A Chemotaxis protein CHEY 37.4 65 0.0022 22.5 5.5 36 107-142 44-88 (128)
116 3cz5_A Two-component response 37.2 68 0.0023 23.4 5.8 37 106-142 45-88 (153)
117 3kkj_A Amine oxidase, flavin-c 36.6 20 0.00068 29.0 2.8 17 26-42 15-31 (336)
118 2b4a_A BH3024; flavodoxin-like 36.5 61 0.0021 23.1 5.3 37 104-140 51-95 (138)
119 3eag_A UDP-N-acetylmuramate:L- 36.5 36 0.0012 29.5 4.5 31 9-43 5-35 (326)
120 2jk1_A HUPR, hydrogenase trans 36.5 50 0.0017 23.7 4.8 37 106-142 38-81 (139)
121 4hb9_A Similarities with proba 36.4 26 0.00087 30.9 3.6 29 9-42 2-30 (412)
122 1g63_A Epidermin modifying enz 36.4 36 0.0012 26.9 4.0 38 10-48 4-41 (181)
123 4b4o_A Epimerase family protei 36.3 23 0.00077 30.0 3.1 26 17-44 7-32 (298)
124 1qkk_A DCTD, C4-dicarboxylate 36.2 52 0.0018 24.2 5.0 38 106-143 41-85 (155)
125 1yio_A Response regulatory pro 36.2 45 0.0015 26.1 4.8 36 107-142 43-85 (208)
126 1p3y_1 MRSD protein; flavoprot 36.2 40 0.0014 26.9 4.3 37 9-46 9-45 (194)
127 3f67_A Putative dienelactone h 36.1 58 0.002 25.7 5.6 34 10-43 33-66 (241)
128 2g1u_A Hypothetical protein TM 36.0 40 0.0014 25.3 4.3 34 7-45 18-51 (155)
129 3hdg_A Uncharacterized protein 35.6 38 0.0013 24.3 3.9 37 105-141 44-87 (137)
130 1kgs_A DRRD, DNA binding respo 35.5 62 0.0021 25.6 5.6 39 106-144 40-85 (225)
131 1kjn_A MTH0777; hypotethical p 35.3 48 0.0016 25.2 4.3 38 9-46 7-46 (157)
132 3auf_A Glycinamide ribonucleot 35.3 1.6E+02 0.0056 24.0 8.1 109 7-142 21-132 (229)
133 1p9o_A Phosphopantothenoylcyst 35.2 21 0.00073 31.0 2.7 21 26-46 69-89 (313)
134 3jte_A Response regulator rece 35.1 66 0.0023 23.0 5.3 33 110-142 47-86 (143)
135 1tvm_A PTS system, galactitol- 35.1 93 0.0032 22.1 5.9 38 6-43 19-57 (113)
136 3oy2_A Glycosyltransferase B73 34.9 35 0.0012 30.1 4.3 37 10-47 2-41 (413)
137 2ejb_A Probable aromatic acid 34.9 58 0.002 25.8 5.1 36 10-46 3-38 (189)
138 3c97_A Signal transduction his 34.7 74 0.0025 22.8 5.5 24 107-130 49-74 (140)
139 3r0j_A Possible two component 34.7 57 0.002 26.5 5.3 39 105-143 60-105 (250)
140 2j48_A Two-component sensor ki 34.6 67 0.0023 21.7 5.1 37 106-142 39-84 (119)
141 3hzh_A Chemotaxis response reg 34.5 61 0.0021 24.0 5.1 38 105-142 74-120 (157)
142 3q9s_A DNA-binding response re 34.0 59 0.002 26.6 5.3 37 106-142 75-117 (249)
143 1a04_A Nitrate/nitrite respons 33.9 57 0.0019 25.7 5.1 36 107-142 46-88 (215)
144 3mm4_A Histidine kinase homolo 33.2 48 0.0016 26.2 4.5 31 112-142 119-160 (206)
145 1ys7_A Transcriptional regulat 33.2 71 0.0024 25.4 5.6 36 107-142 46-88 (233)
146 3h5i_A Response regulator/sens 33.1 88 0.003 22.4 5.7 32 111-142 49-87 (140)
147 1zh2_A KDP operon transcriptio 32.9 61 0.0021 22.3 4.6 34 109-142 42-81 (121)
148 1f9y_A HPPK, protein (6-hydrox 32.8 36 0.0012 26.2 3.4 28 272-299 2-29 (158)
149 3p0j_A Tyrosyl-tRNA synthetase 32.8 50 0.0017 32.1 5.1 45 3-47 377-426 (690)
150 1mvo_A PHOP response regulator 32.8 79 0.0027 22.3 5.4 35 107-141 42-83 (136)
151 3kto_A Response regulator rece 32.6 31 0.001 24.9 3.0 36 108-143 46-90 (136)
152 2llz_A Uncharacterized protein 32.6 27 0.00091 24.4 2.3 23 276-298 56-78 (100)
153 1i3c_A Response regulator RCP1 32.5 86 0.003 22.7 5.7 32 111-142 60-100 (149)
154 2qx0_A 7,8-dihydro-6-hydroxyme 32.4 40 0.0014 26.0 3.6 28 272-299 3-30 (159)
155 2xwp_A Sirohydrochlorin cobalt 32.3 28 0.00096 29.2 3.0 37 270-306 3-42 (264)
156 2qv0_A Protein MRKE; structura 32.0 86 0.0029 22.4 5.5 27 106-132 49-77 (143)
157 3qvl_A Putative hydantoin race 31.9 2.1E+02 0.0073 23.4 10.0 30 111-140 68-98 (245)
158 3n0r_A Response regulator; sig 31.8 71 0.0024 27.0 5.5 36 107-142 200-242 (286)
159 3lua_A Response regulator rece 31.7 60 0.002 23.2 4.5 38 105-142 42-90 (140)
160 3f6c_A Positive transcription 31.6 49 0.0017 23.4 4.0 36 107-142 41-83 (134)
161 1k68_A Phytochrome response re 31.3 93 0.0032 21.9 5.6 33 111-143 54-95 (140)
162 3eq2_A Probable two-component 31.3 56 0.0019 28.9 5.0 36 107-142 44-86 (394)
163 2gkg_A Response regulator homo 31.2 74 0.0025 21.9 4.9 34 106-139 43-86 (127)
164 2oqr_A Sensory transduction pr 31.1 69 0.0024 25.4 5.2 37 107-143 43-85 (230)
165 1lss_A TRK system potassium up 31.1 35 0.0012 24.6 3.1 31 9-44 5-35 (140)
166 3bul_A Methionine synthase; tr 31.0 52 0.0018 31.2 4.8 39 7-45 97-135 (579)
167 3lyu_A Putative hydrogenase; t 31.0 42 0.0014 25.0 3.5 34 9-45 19-52 (142)
168 3ip0_A 2-amino-4-hydroxy-6-hyd 30.8 64 0.0022 24.8 4.5 28 272-299 2-29 (158)
169 1u7z_A Coenzyme A biosynthesis 30.4 38 0.0013 27.8 3.4 20 26-45 38-57 (226)
170 2l2q_A PTS system, cellobiose- 30.4 88 0.003 22.0 5.0 37 7-43 3-39 (109)
171 1zi8_A Carboxymethylenebutenol 30.1 82 0.0028 24.6 5.5 33 10-43 30-62 (236)
172 2w36_A Endonuclease V; hypoxan 29.7 42 0.0014 27.6 3.4 39 104-142 93-140 (225)
173 3cnb_A DNA-binding response re 29.5 71 0.0024 22.7 4.6 37 106-142 48-93 (143)
174 2qsj_A DNA-binding response re 29.5 58 0.002 23.8 4.2 39 104-142 41-87 (154)
175 2gwr_A DNA-binding response re 29.4 56 0.0019 26.3 4.4 36 107-142 44-85 (238)
176 3cg4_A Response regulator rece 28.9 74 0.0025 22.7 4.6 38 104-141 43-89 (142)
177 2vsy_A XCC0866; transferase, g 28.7 70 0.0024 29.7 5.4 40 6-45 203-246 (568)
178 3dkr_A Esterase D; alpha beta 28.7 90 0.0031 24.4 5.5 33 9-42 23-55 (251)
179 3klj_A NAD(FAD)-dependent dehy 28.6 34 0.0012 30.4 3.1 39 3-46 4-42 (385)
180 2qvg_A Two component response 28.6 1.1E+02 0.0037 21.8 5.5 32 111-142 58-98 (143)
181 3qbc_A 2-amino-4-hydroxy-6-hyd 28.5 39 0.0013 26.2 2.9 29 271-299 5-33 (161)
182 3pdi_B Nitrogenase MOFE cofact 28.3 58 0.002 29.9 4.6 33 104-139 367-399 (458)
183 1jx7_A Hypothetical protein YC 28.3 82 0.0028 22.0 4.7 27 19-45 15-43 (117)
184 2ayx_A Sensor kinase protein R 28.2 72 0.0025 26.2 4.9 37 106-142 167-210 (254)
185 1k66_A Phytochrome response re 28.2 1.1E+02 0.0039 21.7 5.6 32 111-142 61-101 (149)
186 2jba_A Phosphate regulon trans 28.1 50 0.0017 23.0 3.5 37 107-143 41-86 (127)
187 4f0j_A Probable hydrolytic enz 28.0 91 0.0031 25.5 5.6 37 7-44 45-81 (315)
188 1dz3_A Stage 0 sporulation pro 27.9 93 0.0032 21.8 5.0 36 107-142 43-86 (130)
189 3of5_A Dethiobiotin synthetase 27.9 72 0.0025 26.0 4.7 33 11-43 7-40 (228)
190 3qxc_A Dethiobiotin synthetase 27.7 89 0.003 25.8 5.3 41 102-142 119-170 (242)
191 3dm5_A SRP54, signal recogniti 27.7 1.1E+02 0.0038 27.8 6.3 40 9-48 101-140 (443)
192 2qs7_A Uncharacterized protein 27.4 83 0.0029 23.5 4.7 35 11-45 11-45 (144)
193 3pfb_A Cinnamoyl esterase; alp 27.2 1.4E+02 0.0048 23.7 6.6 35 9-44 47-83 (270)
194 3s40_A Diacylglycerol kinase; 27.2 1.1E+02 0.0039 25.9 6.1 46 1-46 3-49 (304)
195 3bre_A Probable two-component 27.1 79 0.0027 27.3 5.2 36 108-143 59-103 (358)
196 3c3w_A Two component transcrip 27.1 51 0.0018 26.3 3.7 36 107-142 42-84 (225)
197 2x5n_A SPRPN10, 26S proteasome 27.1 1.1E+02 0.0039 24.0 5.6 34 11-44 110-143 (192)
198 1cbk_A Protein (7,8-dihydro-6- 27.0 44 0.0015 25.8 2.9 28 272-299 3-30 (160)
199 3sbx_A Putative uncharacterize 26.9 70 0.0024 25.4 4.2 34 9-42 14-50 (189)
200 3sty_A Methylketone synthase 1 26.7 95 0.0032 24.7 5.4 36 8-44 12-47 (267)
201 2e6x_A TT1592, hypothetical pr 26.4 50 0.0017 21.0 2.5 18 293-310 4-21 (69)
202 1ydh_A AT5G11950; structural g 26.1 1.1E+02 0.0037 24.8 5.4 33 10-42 11-47 (216)
203 4ao6_A Esterase; hydrolase, th 26.1 63 0.0022 26.5 4.2 35 10-44 57-93 (259)
204 3heb_A Response regulator rece 26.0 1.2E+02 0.004 22.0 5.4 34 110-143 57-99 (152)
205 2wtm_A EST1E; hydrolase; 1.60A 25.9 1.1E+02 0.0037 24.4 5.6 34 9-43 28-63 (251)
206 4fbl_A LIPS lipolytic enzyme; 25.8 56 0.0019 27.1 3.8 31 11-42 54-84 (281)
207 3fgn_A Dethiobiotin synthetase 25.5 87 0.003 26.0 4.8 38 6-43 23-62 (251)
208 3lyh_A Cobalamin (vitamin B12) 25.4 49 0.0017 24.0 2.9 37 269-305 5-41 (126)
209 1s8n_A Putative antiterminator 25.1 1.1E+02 0.0036 23.8 5.2 38 106-143 52-95 (205)
210 3klo_A Transcriptional regulat 25.1 42 0.0014 26.8 2.8 36 107-142 49-92 (225)
211 2pk3_A GDP-6-deoxy-D-LYXO-4-he 25.0 53 0.0018 27.8 3.5 31 11-44 14-44 (321)
212 1vl0_A DTDP-4-dehydrorhamnose 24.7 44 0.0015 27.9 3.0 27 16-44 18-44 (292)
213 3t8y_A CHEB, chemotaxis respon 24.7 1.3E+02 0.0044 22.3 5.4 36 106-141 65-106 (164)
214 2hy5_A Putative sulfurtransfer 24.5 1.1E+02 0.0038 22.1 4.9 25 20-44 15-40 (130)
215 3ilh_A Two component response 24.3 1.2E+02 0.004 21.6 5.0 32 111-142 59-101 (146)
216 3d59_A Platelet-activating fac 24.2 81 0.0028 27.6 4.7 37 8-44 97-133 (383)
217 2raf_A Putative dinucleotide-b 24.2 72 0.0025 25.4 4.0 32 8-44 19-50 (209)
218 4ep4_A Crossover junction endo 24.2 1.6E+02 0.0054 22.7 5.7 48 98-145 49-111 (166)
219 4g65_A TRK system potassium up 24.2 28 0.00095 32.0 1.6 33 7-44 2-34 (461)
220 2fx5_A Lipase; alpha-beta hydr 23.9 77 0.0026 25.7 4.3 34 9-42 49-82 (258)
221 1byi_A Dethiobiotin synthase; 23.9 1E+02 0.0035 24.4 4.9 33 10-42 3-36 (224)
222 1jkx_A GART;, phosphoribosylgl 23.7 2.8E+02 0.0096 22.2 8.1 106 10-142 2-110 (212)
223 3e8x_A Putative NAD-dependent 23.7 52 0.0018 26.5 3.1 19 26-44 35-53 (236)
224 3qua_A Putative uncharacterize 23.7 1.2E+02 0.0041 24.2 5.1 34 9-42 23-59 (199)
225 1hjr_A Holliday junction resol 23.7 1.4E+02 0.0047 22.9 5.3 47 99-145 46-107 (158)
226 3rzi_A Probable 3-deoxy-D-arab 23.6 1.1E+02 0.0036 27.9 5.1 77 221-309 287-368 (462)
227 3tqr_A Phosphoribosylglycinami 23.4 1.7E+02 0.0058 23.6 6.1 109 7-142 4-114 (215)
228 3ew7_A LMO0794 protein; Q8Y8U8 23.4 54 0.0018 25.8 3.1 19 26-44 14-32 (221)
229 3kcn_A Adenylate cyclase homol 23.4 1.5E+02 0.005 21.4 5.5 37 107-143 42-86 (151)
230 1js1_X Transcarbamylase; alpha 23.3 93 0.0032 27.1 4.7 39 9-47 169-207 (324)
231 3goc_A Endonuclease V; alpha-b 23.3 1.3E+02 0.0045 24.8 5.3 32 112-143 107-145 (237)
232 1mxh_A Pteridine reductase 2; 23.3 86 0.0029 25.9 4.5 32 10-44 12-43 (276)
233 3llv_A Exopolyphosphatase-rela 22.7 54 0.0018 23.9 2.8 31 9-44 7-37 (141)
234 2etv_A Iron(III) ABC transport 22.5 66 0.0023 28.0 3.7 37 103-140 88-125 (346)
235 3qit_A CURM TE, polyketide syn 22.4 1.3E+02 0.0046 23.8 5.5 36 8-44 26-61 (286)
236 3hwr_A 2-dehydropantoate 2-red 22.4 65 0.0022 27.7 3.6 32 6-42 17-48 (318)
237 3pe6_A Monoglyceride lipase; a 22.4 1.3E+02 0.0045 24.1 5.5 35 9-44 43-77 (303)
238 2xci_A KDO-transferase, 3-deox 22.2 1.4E+02 0.0048 26.1 5.9 33 10-44 42-74 (374)
239 1o97_C Electron transferring f 22.2 1.1E+02 0.0038 25.6 4.9 41 102-142 102-148 (264)
240 2xxa_A Signal recognition part 22.0 1.7E+02 0.0059 26.4 6.5 40 9-48 101-141 (433)
241 1w25_A Stalked-cell differenti 22.0 1.1E+02 0.0037 27.5 5.2 37 107-143 40-85 (459)
242 4e5v_A Putative THUA-like prot 22.0 1.2E+02 0.0042 25.6 5.2 39 6-45 2-43 (281)
243 1q57_A DNA primase/helicase; d 21.9 1.2E+02 0.0041 27.9 5.6 44 97-140 339-401 (503)
244 3lrx_A Putative hydrogenase; a 21.9 61 0.0021 24.6 3.0 36 9-47 24-59 (158)
245 3ihm_A Styrene monooxygenase A 21.8 52 0.0018 29.6 3.0 31 9-44 23-53 (430)
246 3kjh_A CO dehydrogenase/acetyl 21.7 78 0.0027 25.5 3.9 37 10-46 2-38 (254)
247 3g0o_A 3-hydroxyisobutyrate de 21.7 59 0.002 27.6 3.2 33 7-44 6-38 (303)
248 3oz2_A Digeranylgeranylglycero 21.6 50 0.0017 28.7 2.8 28 10-42 6-33 (397)
249 3h2s_A Putative NADH-flavin re 21.6 62 0.0021 25.6 3.1 19 26-44 14-32 (224)
250 2j37_W Signal recognition part 21.5 1.4E+02 0.0047 27.8 5.8 40 8-47 101-140 (504)
251 2xws_A Sirohydrochlorin cobalt 21.4 48 0.0017 24.1 2.2 36 270-305 4-41 (133)
252 1weh_A Conserved hypothetical 21.3 1.2E+02 0.0039 23.6 4.5 33 10-42 3-39 (171)
253 2fuk_A XC6422 protein; A/B hyd 21.3 1.6E+02 0.0055 22.6 5.6 36 8-43 37-76 (220)
254 1xjc_A MOBB protein homolog; s 21.0 1.8E+02 0.006 22.4 5.5 36 10-45 6-41 (169)
255 3pdi_A Nitrogenase MOFE cofact 21.0 74 0.0025 29.4 3.8 33 103-138 392-424 (483)
256 3kyj_B CHEY6 protein, putative 20.9 57 0.002 23.6 2.6 36 106-141 53-95 (145)
257 3av3_A Phosphoribosylglycinami 20.9 3.1E+02 0.011 21.9 7.2 106 10-142 5-113 (212)
258 4gyw_A UDP-N-acetylglucosamine 20.9 1.3E+02 0.0043 29.4 5.7 43 268-310 520-562 (723)
259 4dll_A 2-hydroxy-3-oxopropiona 20.9 1.1E+02 0.0037 26.2 4.7 32 8-44 31-62 (320)
260 2hmt_A YUAA protein; RCK, KTN, 20.8 58 0.002 23.5 2.6 30 10-44 8-37 (144)
261 1imj_A CIB, CCG1-interacting f 20.8 1.5E+02 0.0053 22.4 5.4 36 8-44 32-69 (210)
262 1wek_A Hypothetical protein TT 20.6 1.1E+02 0.0036 24.9 4.3 35 9-43 38-76 (217)
263 3u7q_A Nitrogenase molybdenum- 20.6 83 0.0029 29.1 4.1 33 103-138 408-440 (492)
264 3fwz_A Inner membrane protein 20.6 64 0.0022 23.7 2.8 33 8-45 7-39 (140)
265 1efv_B Electron transfer flavo 20.5 1.3E+02 0.0044 25.1 4.9 40 103-142 107-152 (255)
266 1ny5_A Transcriptional regulat 20.5 1.2E+02 0.0042 26.8 5.1 38 106-143 38-82 (387)
267 1xfi_A Unknown protein; struct 20.4 1.2E+02 0.0042 26.8 5.0 35 9-43 213-248 (367)
268 4hn9_A Iron complex transport 20.4 75 0.0026 27.4 3.6 37 104-141 109-145 (335)
269 2a33_A Hypothetical protein; s 20.4 1.6E+02 0.0055 23.8 5.3 32 10-41 15-50 (215)
270 1jzt_A Hypothetical 27.5 kDa p 20.4 60 0.002 27.0 2.8 33 9-44 59-93 (246)
271 3fgn_A Dethiobiotin synthetase 20.3 1.5E+02 0.005 24.6 5.2 40 103-142 115-166 (251)
272 1uxo_A YDEN protein; hydrolase 20.3 1.4E+02 0.0047 22.5 4.9 35 9-43 5-40 (192)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4e-47 Score=356.41 Aligned_cols=311 Identities=20% Similarity=0.274 Sum_probs=225.1
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhCC--CeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEKG--HHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAE 84 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~rG--h~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (336)
++.||+++|+|++||++||++||+.|++|| +.|||++++....++.+......++|+++.+| ++++.+.+...+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip----dglp~~~~~~~~ 87 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH----DGLPKGYVSSGN 87 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC----CCCCTTCCCCSC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC----CCCCCCccccCC
Confidence 368999999999999999999999999999 99999998654433332211112579999998 777776554333
Q ss_pred CCCCchH-HHHHHHHHhhHHHHHhhhh--cCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhcCCCCccccCCC
Q 019759 85 LPIHKVP-YLKKAHDLLQLPLTNFLQD--SRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFTGPPSDVIAGRR 161 (336)
Q Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~~ll~~--~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (336)
....+. ++......+.+.+++++++ .++||||+|.|++|+.++|+++|||++.||+++++.++.+++.+.......
T Consensus 88 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 88 -PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 212222 2222233455666666554 368999999999999999999999999999999988877766543221100
Q ss_pred --CCCCCcccCCccccCCCccccccccc-ccccc-CCCCchhHHHHHHHHhcCceEEEEccchhchHhHHHHHHhhhCCC
Q 019759 162 --QKPEDFTVVPEWIDFQSNLAFKPYET-LINQD-GMDDSVSDYLRAAFVLQDCRVVILRSCAEFEPDALRLLGKMLQKP 237 (336)
Q Consensus 162 --~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~l~~~~~p~ 237 (336)
....+ .+..++|+. ..++.+++ .++.. .+.....++.++.....+++++++|||++||++++..+++.. |+
T Consensus 167 ~~~~~~~--~~~~~iPg~--p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~ 241 (454)
T 3hbf_A 167 SKEVHDV--KSIDVLPGF--PELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-KL 241 (454)
T ss_dssp HHHHTTS--SCBCCSTTS--CCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SC
T ss_pred CCccccc--cccccCCCC--CCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CC
Confidence 00001 112234432 24555565 44431 122233556666777788999999999999999998888754 68
Q ss_pred eeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCCCCCC
Q 019759 238 VLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTLSQELLHELAYGLEKSGLPFIWIIKNRPLVEGESG 317 (336)
Q Consensus 238 v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~~~~~~~~ia~al~~~~~~~lW~~r~~~~~~~~~~ 317 (336)
+++|||+++..... ....+++|.+|||++++++||||||||+..++.++++++++||++++++|||++++..
T Consensus 242 v~~vGPl~~~~~~~-~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~------- 313 (454)
T 3hbf_A 242 LLNVGPFNLTTPQR-KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP------- 313 (454)
T ss_dssp EEECCCHHHHSCCS-CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH-------
T ss_pred EEEECCcccccccc-cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc-------
Confidence 99999998643311 1123568999999998999999999999999999999999999999999999998753
Q ss_pred ccCCCChhHHHhhcCCCCC
Q 019759 318 LDHLLPPGFQDRVSGTGLV 336 (336)
Q Consensus 318 ~~~~~~~~~~~~~~~~g~v 336 (336)
.+.+|++|.+|++++|+|
T Consensus 314 -~~~lp~~~~~~~~~~~~v 331 (454)
T 3hbf_A 314 -KEKLPKGFLERTKTKGKI 331 (454)
T ss_dssp -HHHSCTTHHHHTTTTEEE
T ss_pred -hhcCCHhHHhhcCCceEE
Confidence 356899999998887764
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.6e-39 Score=306.45 Aligned_cols=319 Identities=23% Similarity=0.324 Sum_probs=207.1
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhC-CCeEEEEeCCCC--CCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEK-GHHVSYISTPKN--IDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTA 83 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~r-Gh~VT~~t~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (336)
++.||+++|+|++||++||++||++|++| ||+|||++++.. ...+.+.......+++|+.++... .+. ..
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~---~~~-~~--- 77 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVD---LTD-LS--- 77 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCC---CTT-SC---
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCC---CCC-CC---
Confidence 44799999999999999999999999998 999999998753 222221000012489999987321 111 11
Q ss_pred CCCCCchHHHHHHHHHhhHHHHHhhhh----cCC-cEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhcCCCCcccc
Q 019759 84 ELPIHKVPYLKKAHDLLQLPLTNFLQD----SRV-NWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFTGPPSDVIA 158 (336)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~ll~~----~~~-D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~ 158 (336)
.. ......+........+.+++++++ .++ ||||+|.++.|+..+|+++|+|+|.++++++..++.+++++....
T Consensus 78 ~~-~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 156 (480)
T 2vch_A 78 SS-TRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDE 156 (480)
T ss_dssp TT-CCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred Cc-hhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHh
Confidence 11 122233333444556677777765 378 999999999999999999999999999998876554433221110
Q ss_pred CCCCCCCCcccCCccccCCCccccccccc-cccccCCCCchhHHHHHHHHhcCceEEEEccchhchHhHHHHHHhhh--C
Q 019759 159 GRRQKPEDFTVVPEWIDFQSNLAFKPYET-LINQDGMDDSVSDYLRAAFVLQDCRVVILRSCAEFEPDALRLLGKML--Q 235 (336)
Q Consensus 159 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~l~~~~--~ 235 (336)
.......+... ...+|. ..+++..++ ..+.......+..+........+++++++||+.++|++++..+++.. .
T Consensus 157 ~~~~~~~~~~~-~~~~Pg--~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~ 233 (480)
T 2vch_A 157 TVSCEFRELTE-PLMLPG--CVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDK 233 (480)
T ss_dssp HCCSCGGGCSS-CBCCTT--CCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTC
T ss_pred cCCCcccccCC-cccCCC--CCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCC
Confidence 00000000000 011221 112222233 22211111123333444555667889999999999999888776421 2
Q ss_pred CCeeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCC--
Q 019759 236 KPVLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTLSQELLHELAYGLEKSGLPFIWIIKNRPLVE-- 313 (336)
Q Consensus 236 p~v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~~~~~~~~ia~al~~~~~~~lW~~r~~~~~~-- 313 (336)
+++++|||++.........+++.+|.+|||++++++||||||||+..++.++++++++||++++++|||+++.....+
T Consensus 234 ~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~ 313 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANS 313 (480)
T ss_dssp CCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTT
T ss_pred CcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccc
Confidence 689999999875321100134678999999988899999999999999999999999999999999999999764110
Q ss_pred ------CCCCccCCCChhHHHhhcCCCCC
Q 019759 314 ------GESGLDHLLPPGFQDRVSGTGLV 336 (336)
Q Consensus 314 ------~~~~~~~~~~~~~~~~~~~~g~v 336 (336)
+++.....+|++|.+|++++|++
T Consensus 314 ~~~~~~~~~~~~~~lp~~~~~~~~~~g~~ 342 (480)
T 2vch_A 314 SYFDSHSQTDPLTFLPPGFLERTKKRGFV 342 (480)
T ss_dssp TTTCC--CSCGGGGSCTTHHHHTTTTEEE
T ss_pred cccccccccchhhhcCHHHHHHhCCCeEE
Confidence 00111246899999999988863
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.1e-39 Score=308.76 Aligned_cols=324 Identities=23% Similarity=0.366 Sum_probs=205.7
Q ss_pred CCCCCCCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCC--C--CCCeEEEecCCCCCCCCC
Q 019759 1 MDLQNRQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTN--L--SSRLSYIQLPLPQLDGLP 76 (336)
Q Consensus 1 ~~~~~~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~--~--~~~i~~~~~~~~~~~~~~ 76 (336)
|....+++.||+++|+|++||++||+.||++|++|||+|||++++.....+.+.... . .++++++.++ ++++
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~----~~lp 76 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP----DGLT 76 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC----CCCC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC----CCCC
Confidence 333345567999999999999999999999999999999999987543333222000 0 1379999887 4555
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHhhHHHHHhhhh-------cCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhh
Q 019759 77 EGAESTAELPIHKVPYLKKAHDLLQLPLTNFLQD-------SRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCF 149 (336)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-------~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~ 149 (336)
...... .....+..++......+.+.+++++++ .++||||+|.++.|+..+|+++|+|+|.++++++.....
T Consensus 77 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 155 (482)
T 2pq6_A 77 PMEGDG-DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLN 155 (482)
T ss_dssp ----------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred Cccccc-CcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHH
Confidence 311000 111122233332223455667776653 479999999999999999999999999999998876655
Q ss_pred cCCCCcc--ccCCCCCCC-----Cc-ccCCccccCCCccccccccc-cccccC--CCCchhHHHHHHHHhcCceEEEEcc
Q 019759 150 TGPPSDV--IAGRRQKPE-----DF-TVVPEWIDFQSNLAFKPYET-LINQDG--MDDSVSDYLRAAFVLQDCRVVILRS 218 (336)
Q Consensus 150 ~~~~~~~--~~~~~~~~~-----~~-~~~~~~~p~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~nt 218 (336)
+++.+.. .++.+.... .+ ......+|.. ..++..++ .++... .......+....+...+++++++||
T Consensus 156 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt 233 (482)
T 2pq6_A 156 VMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGL--KNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNT 233 (482)
T ss_dssp HTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTC--CSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESS
T ss_pred HHHHHHHHhcCCCCCccccccccccccCccccCCCC--CCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcC
Confidence 4432211 111111100 00 0011112211 11222233 233211 1112233444556667899999999
Q ss_pred chhchHhHHHHHHhhhCCCeeeeeeccCC-CCC-------C--CCC-CCccccccccccCCCCeEEEEEeCccccCCHHH
Q 019759 219 CAEFEPDALRLLGKMLQKPVLPVGLLAPS-LQD-------S--AAG-EHWPVLKDWLDSKENNSVVYAAFGTEMTLSQEL 287 (336)
Q Consensus 219 ~~~le~~~~~~l~~~~~p~v~~VGpl~~~-~~~-------~--~~~-~~~~~l~~wLd~~~~~~VVyvSfGS~~~~~~~~ 287 (336)
+.+||+++++.+++.. +++++|||+++. ... . ... +.+.+|.+|||++++++||||||||+..++.++
T Consensus 234 ~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~ 312 (482)
T 2pq6_A 234 FNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQ 312 (482)
T ss_dssp CGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHH
T ss_pred hHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHH
Confidence 9999999888888755 789999999863 211 0 011 124568999999888999999999999999999
Q ss_pred HHHHHHHHHhCCCceEEEEeCCCCCCCCCCccCCCChhHHHhhcCCCCC
Q 019759 288 LHELAYGLEKSGLPFIWIIKNRPLVEGESGLDHLLPPGFQDRVSGTGLV 336 (336)
Q Consensus 288 ~~~ia~al~~~~~~~lW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~g~v 336 (336)
+.+++++|++++++|||+++++. ..+ ....+|++|.+|+.++|+|
T Consensus 313 ~~~~~~~l~~~~~~~l~~~~~~~-~~~---~~~~l~~~~~~~~~~~~~v 357 (482)
T 2pq6_A 313 LLEFAWGLANCKKSFLWIIRPDL-VIG---GSVIFSSEFTNEIADRGLI 357 (482)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGG-STT---TGGGSCHHHHHHHTTTEEE
T ss_pred HHHHHHHHHhcCCcEEEEEcCCc-ccc---ccccCcHhHHHhcCCCEEE
Confidence 99999999999999999998752 001 1234889999988776653
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=7.4e-39 Score=302.45 Aligned_cols=316 Identities=20% Similarity=0.272 Sum_probs=199.3
Q ss_pred CCCCCCCceEEEEEcCCCccchHHHHHHHHHHHhCCC--eEEEEeCCCCCCCCCCCC-CCCCCCeEEEecCCCCCCCCCC
Q 019759 1 MDLQNRQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGH--HVSYISTPKNIDRLPQIP-TNLSSRLSYIQLPLPQLDGLPE 77 (336)
Q Consensus 1 ~~~~~~~~~~il~~~~p~~gH~~p~l~la~~La~rGh--~VT~~t~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~ 77 (336)
|+.+ .++.||+++|+|++||++|+++||++|++||| .||+++++.....+.+.. .....+++++.++ ++++.
T Consensus 1 m~~~-~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~----~glp~ 75 (456)
T 2c1x_A 1 MSQT-TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS----DGVPE 75 (456)
T ss_dssp -------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECC----CCCCT
T ss_pred CCCC-CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC----CCCCC
Confidence 6664 45679999999999999999999999999975 468888753222211110 0001479999887 55665
Q ss_pred CCCCCCCCCCCchHHHHHHH-HHhhHHHHHhhhh--cCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhcCCCC
Q 019759 78 GAESTAELPIHKVPYLKKAH-DLLQLPLTNFLQD--SRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFTGPPS 154 (336)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~--~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~ 154 (336)
+.+.. .........+.... ..+.+.+++++++ .++||||+|.++.|+.++|+++|||+|.++++++..+..+.+.+
T Consensus 76 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (456)
T 2c1x_A 76 GYVFA-GRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYID 154 (456)
T ss_dssp TCCCC-CCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHH
T ss_pred ccccc-CChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhH
Confidence 43221 11212222222222 2233445544433 47999999999999999999999999999999877655433222
Q ss_pred ccc---cCCCCCCCCcccCCccccCCCccccccccc-cccc-cCCCCch-hHHHHHHHHhcCceEEEEccchhchHhHHH
Q 019759 155 DVI---AGRRQKPEDFTVVPEWIDFQSNLAFKPYET-LINQ-DGMDDSV-SDYLRAAFVLQDCRVVILRSCAEFEPDALR 228 (336)
Q Consensus 155 ~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~nt~~~le~~~~~ 228 (336)
... +.... ..........+|... .++.+++ ..+. ....... ..+.++.....+++++++||++++|++++.
T Consensus 155 ~~~~~~~~~~~-~~~~~~~~~~~pg~~--~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~ 231 (456)
T 2c1x_A 155 EIREKIGVSGI-QGREDELLNFIPGMS--KVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN 231 (456)
T ss_dssp HHHHHHCSSCC-TTCTTCBCTTSTTCT--TCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHHhccCCccc-ccccccccccCCCCC--cccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH
Confidence 110 11000 000001111233211 1233333 2111 1111111 333444455678999999999999999888
Q ss_pred HHHhhhCCCeeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEeC
Q 019759 229 LLGKMLQKPVLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTLSQELLHELAYGLEKSGLPFIWIIKN 308 (336)
Q Consensus 229 ~l~~~~~p~v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~~~~~~~~ia~al~~~~~~~lW~~r~ 308 (336)
.+++.+ +++++|||++...... ..+.+.+|.+|||++++++||||||||+...+.+++++++++|++++++|||++++
T Consensus 232 ~~~~~~-~~~~~vGpl~~~~~~~-~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 309 (456)
T 2c1x_A 232 DLKSKL-KTYLNIGPFNLITPPP-VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRD 309 (456)
T ss_dssp HHHHHS-SCEEECCCHHHHC----------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCG
T ss_pred HHHhcC-CCEEEecCcccCcccc-cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECC
Confidence 888755 6899999998643211 01224579999999888999999999999889999999999999999999999986
Q ss_pred CCCCCCCCCccCCCChhHHHhhcCCCC
Q 019759 309 RPLVEGESGLDHLLPPGFQDRVSGTGL 335 (336)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~g~ 335 (336)
+. ...+|++|.+|++++|+
T Consensus 310 ~~--------~~~l~~~~~~~~~~~~~ 328 (456)
T 2c1x_A 310 KA--------RVHLPEGFLEKTRGYGM 328 (456)
T ss_dssp GG--------GGGSCTTHHHHHTTTEE
T ss_pred cc--------hhhCCHHHHhhcCCceE
Confidence 53 34688889888776654
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.5e-37 Score=294.26 Aligned_cols=310 Identities=17% Similarity=0.233 Sum_probs=207.3
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhC--CCeEEEEeCCCCCCC-CCCCCC---CCCCCeEEEecCCCCCCCCCCCCC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEK--GHHVSYISTPKNIDR-LPQIPT---NLSSRLSYIQLPLPQLDGLPEGAE 80 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~r--Gh~VT~~t~~~~~~~-~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~ 80 (336)
++.||+++|+|++||++||++||++|++| ||+|||++++..... +.+... ....+++|+.+|.. .++. .+
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~---~~~~-~~ 83 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV---EPPP-QE 83 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC---CCCC-GG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC---CCCc-cc
Confidence 45799999999999999999999999999 999999998764321 111100 11247999998832 1221 11
Q ss_pred CCCCCCCCchHHHHHHHHHhhHHHHHhhhh---cCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhcCCCCccc
Q 019759 81 STAELPIHKVPYLKKAHDLLQLPLTNFLQD---SRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFTGPPSDVI 157 (336)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~---~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~ 157 (336)
.... .... +........+.+++++++ .++||||+|.++.|+..+|+++|||++.++++++..+..+++.+...
T Consensus 84 ~~~~--~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 84 LLKS--PEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp GGGS--HHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred ccCC--ccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 0001 0111 333444566678888876 58999999999999999999999999999998887665443332211
Q ss_pred cCCCCCCCCcccCCccccCCCccccccccc-cccccCCCCchhHHHHHHHHhcCceEEEEccchhchHhHHHHHHhhh--
Q 019759 158 AGRRQKPEDFTVVPEWIDFQSNLAFKPYET-LINQDGMDDSVSDYLRAAFVLQDCRVVILRSCAEFEPDALRLLGKML-- 234 (336)
Q Consensus 158 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~l~~~~-- 234 (336)
...+....+.......+|... .+++.+++ ..+... ...+..+........+++++++|||.++|++++..+++..
T Consensus 160 ~~~~~~~~~~~~~~~~~pg~~-~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p 237 (463)
T 2acv_A 160 IEEVFDDSDRDHQLLNIPGIS-NQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEK 237 (463)
T ss_dssp TTCCCCCSSGGGCEECCTTCS-SCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTT
T ss_pred ccCCCCCccccCceeECCCCC-CCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcccc
Confidence 000000000000001122210 12333333 122111 1233444444555678899999999999999888877654
Q ss_pred CCCeeeeeeccCCCC-CCCCC--CCccccccccccCCCCeEEEEEeCccc-cCCHHHHHHHHHHHHhCCCceEEEEeCCC
Q 019759 235 QKPVLPVGLLAPSLQ-DSAAG--EHWPVLKDWLDSKENNSVVYAAFGTEM-TLSQELLHELAYGLEKSGLPFIWIIKNRP 310 (336)
Q Consensus 235 ~p~v~~VGpl~~~~~-~~~~~--~~~~~l~~wLd~~~~~~VVyvSfGS~~-~~~~~~~~~ia~al~~~~~~~lW~~r~~~ 310 (336)
++++++|||++.... ..... .++.+|.+|||++++++||||||||+. .++.+++++++++|++++++|||+++++
T Consensus 238 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~- 316 (463)
T 2acv_A 238 IPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE- 316 (463)
T ss_dssp SCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC-
T ss_pred CCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC-
Confidence 578999999986532 10000 134689999999888999999999999 8999999999999999999999999763
Q ss_pred CCCCCCCccCCCChhHHHhh--cCCCC
Q 019759 311 LVEGESGLDHLLPPGFQDRV--SGTGL 335 (336)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~--~~~g~ 335 (336)
.+.+|++|.+++ +++|+
T Consensus 317 --------~~~l~~~~~~~~~~~~~~~ 335 (463)
T 2acv_A 317 --------KKVFPEGFLEWMELEGKGM 335 (463)
T ss_dssp --------GGGSCTTHHHHHHHHCSEE
T ss_pred --------cccCChhHHHhhccCCCEE
Confidence 134788888887 66654
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.91 E-value=2.8e-23 Score=194.41 Aligned_cols=272 Identities=15% Similarity=0.121 Sum_probs=163.5
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELP 86 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 86 (336)
+..||++++.+++||++|++.|+++|++|||+|||++++...+.+.+ .+++++.++ .+++.+........
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~------~g~~~~~~~----~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA------AGATPVVYD----SILPKESNPEESWP 80 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------HTCEEEECC----CCSCCTTCTTCCCC
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh------CCCEEEecC----ccccccccchhhcc
Confidence 34699999999999999999999999999999999998765433333 267888776 22332211100111
Q ss_pred CCchH---HHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhcCCCCc-cccCCCC
Q 019759 87 IHKVP---YLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFTGPPSD-VIAGRRQ 162 (336)
Q Consensus 87 ~~~~~---~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~-~~~~~~~ 162 (336)
..... .+........+.+.+++++.+|||||+|.+..|+..+|+++|+|+|.+++..+........... ..+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADR 160 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC--
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccccccccc
Confidence 11112 2222333445667778887899999999998889999999999999998765421110000000 0000000
Q ss_pred CCCCcccCCccccCCCcc-----ccc--cccc-cccccCCCCchhHHHHHHHHhcCceEEEEccchhchHhHHHHHHhhh
Q 019759 163 KPEDFTVVPEWIDFQSNL-----AFK--PYET-LINQDGMDDSVSDYLRAAFVLQDCRVVILRSCAEFEPDALRLLGKML 234 (336)
Q Consensus 163 ~~~~~~~~~~~~p~~~~~-----~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~l~~~~ 234 (336)
.....++......... ... ...+ .+.... +.. ..........+++++|+..+++++. +..
T Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~--~~~~~~~~~~~~~l~~~~~~l~~~~-----~~~ 228 (424)
T 2iya_A 161 --GEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEH---GVD--TPATEFLIAPNRCIVALPRTFQIKG-----DTV 228 (424)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHT---TCC--SCHHHHHHCCSSEEESSCTTTSTTG-----GGC
T ss_pred --ccccccccccccchhhhccchhHHHHHHHHHHHHHHc---CCC--CCHHHhccCCCcEEEEcchhhCCCc-----cCC
Confidence 0000000000000000 000 0000 000000 000 0001111246788999999998752 235
Q ss_pred CCCeeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEeCC
Q 019759 235 QKPVLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTLSQELLHELAYGLEKSGLPFIWIIKNR 309 (336)
Q Consensus 235 ~p~v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~~~~~~~~ia~al~~~~~~~lW~~r~~ 309 (336)
++++++|||+.... .+..+|++.++++++|||+|||......+++.+++++|++.+++|+|.+.+.
T Consensus 229 ~~~~~~vGp~~~~~---------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~ 294 (424)
T 2iya_A 229 GDNYTFVGPTYGDR---------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRF 294 (424)
T ss_dssp CTTEEECCCCCCCC---------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTT
T ss_pred CCCEEEeCCCCCCc---------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCc
Confidence 67899999976421 1234798876778999999999987778999999999999999999988654
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.85 E-value=1.6e-21 Score=181.99 Aligned_cols=256 Identities=10% Similarity=0.049 Sum_probs=149.6
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELPIH 88 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (336)
.||++++.++.||++|+++||++|++|||+|||++++...+.+.+ .+++++.++.. .....+.... .
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~------~g~~~~~i~~~----~~~~~~~~~~-~-- 67 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE------VGVPHVPVGPS----ARAPIQRAKP-L-- 67 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCCEEECCC-----------CCSC-C--
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH------cCCeeeeCCCC----HHHHhhcccc-c--
Confidence 389999999999999999999999999999999998754332332 37888888732 1111111011 1
Q ss_pred chHHHHHHHHH-hhHHHHHhhh-hcCCcEEEEcC-CCcc--hHHHHHHcCCceEEEeccchHHHhhcCCCCccccCCCCC
Q 019759 89 KVPYLKKAHDL-LQLPLTNFLQ-DSRVNWIIHDF-ISHW--LPPVAAQLGVNSVFFSIYSAATLCFTGPPSDVIAGRRQK 163 (336)
Q Consensus 89 ~~~~~~~~~~~-~~~~~~~ll~-~~~~D~vv~D~-~~~~--~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (336)
....+...+.. ....++++.+ ..+|||||+|. +..| +..+|+++|+|+|.++++++.....++ +..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~--p~~------- 138 (415)
T 1iir_A 68 TAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYY--PPP------- 138 (415)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSS--CCC-------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCccc--CCc-------
Confidence 11122222221 2233444443 45899999998 6777 789999999999999887644221111 100
Q ss_pred CCCcccCCccccCCCccccccccc-cccccC-CCCchhHHHH------------HHHHhcCceEEEEccchhchH-hHHH
Q 019759 164 PEDFTVVPEWIDFQSNLAFKPYET-LINQDG-MDDSVSDYLR------------AAFVLQDCRVVILRSCAEFEP-DALR 228 (336)
Q Consensus 164 ~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~------------~~~~~~~~~~~l~nt~~~le~-~~~~ 228 (336)
... ++.+... ...+-. .+.... .......... ..+..... .+++|++.++++ +.
T Consensus 139 ~~~-------~~~~~~~-~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~~-- 207 (415)
T 1iir_A 139 PLG-------EPSTQDT-IDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQP-- 207 (415)
T ss_dssp C-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCCC--
T ss_pred cCC-------ccccchH-HHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCCc--
Confidence 000 0000000 000000 000000 0000000000 01111223 689999999986 31
Q ss_pred HHHhhhCCCeeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEeC
Q 019759 229 LLGKMLQKPVLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTLSQELLHELAYGLEKSGLPFIWIIKN 308 (336)
Q Consensus 229 ~l~~~~~p~v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~~~~~~~~ia~al~~~~~~~lW~~r~ 308 (336)
. .. ++++|||++.... . +.+.++.+|||++ +++|||||||.. .+.+.+++++++|++++++|+|+.+.
T Consensus 208 ---~-~~-~~~~vG~~~~~~~-~---~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~ 275 (415)
T 1iir_A 208 ---T-DL-DAVQTGAWILPDE-R---PLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGW 275 (415)
T ss_dssp ---C-SS-CCEECCCCCCCCC-C---CCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTC
T ss_pred ---c-cC-CeEeeCCCccCcc-c---CCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 1 11 7999999987532 1 3367899999874 479999999998 67888899999999999999999875
Q ss_pred C
Q 019759 309 R 309 (336)
Q Consensus 309 ~ 309 (336)
.
T Consensus 276 ~ 276 (415)
T 1iir_A 276 A 276 (415)
T ss_dssp T
T ss_pred C
Confidence 5
No 8
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.85 E-value=2e-21 Score=180.13 Aligned_cols=248 Identities=16% Similarity=0.141 Sum_probs=136.4
Q ss_pred CCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCC-CCCC--CCCCCCCC
Q 019759 6 RQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLP-QLDG--LPEGAEST 82 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~--~~~~~~~~ 82 (336)
.++.||+|+++|++||++|+++||++|++|||+|||+|++...... . .++.+..+... .... .+......
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~------~g~~~~~~~~~~~~~~~~~~~~~~~~ 92 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-E------AGLCAVDVSPGVNYAKLFVPDDTDVT 92 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-T------TTCEEEESSTTCCSHHHHSCCC----
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-h------cCCeeEecCCchhHhhhccccccccc
Confidence 4568999999999999999999999999999999999986543322 1 25666665411 0000 01110000
Q ss_pred CCC--CCCch----HHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhcCCCCcc
Q 019759 83 AEL--PIHKV----PYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFTGPPSDV 156 (336)
Q Consensus 83 ~~~--~~~~~----~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~ 156 (336)
... ..... ..+..........+.+++++.+||+||+|.+..++..+|+.+|+|++.+........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~--------- 163 (400)
T 4amg_A 93 DPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSE--------- 163 (400)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCC---------
T ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccc---------
Confidence 000 00011 112222223344566677778999999999999999999999999987754321100
Q ss_pred ccCCCCCCCCcccCCccccCCCccccccccccccccCCCCchhHHHHHHHHhc-CceEEEEccchhchHhHHHHHHhhhC
Q 019759 157 IAGRRQKPEDFTVVPEWIDFQSNLAFKPYETLINQDGMDDSVSDYLRAAFVLQ-DCRVVILRSCAEFEPDALRLLGKMLQ 235 (336)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~nt~~~le~~~~~~l~~~~~ 235 (336)
..+. ....+.+ .....+...... .....+............ .....
T Consensus 164 ---------------~~~~-----~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 210 (400)
T 4amg_A 164 ---------------PGLG-----ALIRRAM----------SKDYERHGVTGEPTGSVRLTTTPPSVEALLP---EDRRS 210 (400)
T ss_dssp ---------------HHHH-----HHHHHHT----------HHHHHHTTCCCCCSCEEEEECCCHHHHHTSC---GGGCC
T ss_pred ---------------cchh-----hHHHHHH----------HHHHHHhCCCcccccchhhcccCchhhccCc---ccccC
Confidence 0000 0000000 000000000000 011111111111110000 00011
Q ss_pred CCeeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccCC--HHHHHHHHHHHHhCCCceEEEEeCCC
Q 019759 236 KPVLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTLS--QELLHELAYGLEKSGLPFIWIIKNRP 310 (336)
Q Consensus 236 p~v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~~--~~~~~~ia~al~~~~~~~lW~~r~~~ 310 (336)
+..+.+.++... ....+.+||+.++++++|||||||+...+ .+++.++++++++++++++|.....+
T Consensus 211 ~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~ 279 (400)
T 4amg_A 211 PGAWPMRYVPYN--------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGD 279 (400)
T ss_dssp TTCEECCCCCCC--------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTC
T ss_pred CcccCccccccc--------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcc
Confidence 233333333221 13456679999999999999999987544 47889999999999999999987764
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.82 E-value=5e-20 Score=171.93 Aligned_cols=259 Identities=12% Similarity=-0.004 Sum_probs=150.6
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELPIH 88 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (336)
.||++++.++.||++|++.||++|++|||+|||++++...+.+.+ .+++++.++....+.+.. . ... .
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~------~g~~~~~~~~~~~~~~~~-~--~~~---~ 68 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE------VGVPHVPVGLPQHMMLQE-G--MPP---P 68 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------HTCCEEECSCCGGGCCCT-T--SCC---C
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH------cCCeeeecCCCHHHHHhh-c--ccc---c
Confidence 379999999999999999999999999999999998654333332 277888876321001110 0 000 1
Q ss_pred chHHHHHHHHHh-hHHHHHhhh-hcCCcEEEEcCC-Ccc--hHHHHHHcCCceEEEeccchHHHhhcCCCCccccCCCCC
Q 019759 89 KVPYLKKAHDLL-QLPLTNFLQ-DSRVNWIIHDFI-SHW--LPPVAAQLGVNSVFFSIYSAATLCFTGPPSDVIAGRRQK 163 (336)
Q Consensus 89 ~~~~~~~~~~~~-~~~~~~ll~-~~~~D~vv~D~~-~~~--~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (336)
....+....... ...++.+.+ ..+||+||+|.+ ..+ +..+|+.+|+|+|.+++++......+++ +.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~p-~~-------- 139 (416)
T 1rrv_A 69 PPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLP-PA-------- 139 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSC-CC--------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcccC-CC--------
Confidence 111121111111 222232221 358999999974 455 6789999999999988765432111110 00
Q ss_pred CCCcccCCccccC-CCcc-c-ccccccc-ccccCCCCchhHHH---------HHHHHhcCceEEEEccchhchHhHHHHH
Q 019759 164 PEDFTVVPEWIDF-QSNL-A-FKPYETL-INQDGMDDSVSDYL---------RAAFVLQDCRVVILRSCAEFEPDALRLL 230 (336)
Q Consensus 164 ~~~~~~~~~~~p~-~~~~-~-~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~nt~~~le~~~~~~l 230 (336)
..++. ++.. . +...... +............. ...+...+. ++++|++.+++++.
T Consensus 140 --------~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~---- 206 (416)
T 1rrv_A 140 --------YDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQ---- 206 (416)
T ss_dssp --------BCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCC----
T ss_pred --------CCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCC----
Confidence 00010 0000 0 0000000 00000000000000 011112234 78999999998641
Q ss_pred HhhhCCCeeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCcccc-CCHHHHHHHHHHHHhCCCceEEEEeCC
Q 019759 231 GKMLQKPVLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMT-LSQELLHELAYGLEKSGLPFIWIIKNR 309 (336)
Q Consensus 231 ~~~~~p~v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~-~~~~~~~~ia~al~~~~~~~lW~~r~~ 309 (336)
. . .++++|||++.... . +.+.++.+|||++ +++|||+|||... .+.+.+++++++|++++++|+|+.+..
T Consensus 207 -~-~-~~~~~vG~~~~~~~-~---~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~ 277 (416)
T 1rrv_A 207 -P-D-VDAVQTGAWLLSDE-R---PLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWT 277 (416)
T ss_dssp -S-S-CCCEECCCCCCCCC-C---CCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTT
T ss_pred -C-C-CCeeeECCCccCcc-C---CCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 1 1 27999999987532 1 2367889999874 5799999999864 567888999999999999999998765
Q ss_pred C
Q 019759 310 P 310 (336)
Q Consensus 310 ~ 310 (336)
+
T Consensus 278 ~ 278 (416)
T 1rrv_A 278 E 278 (416)
T ss_dssp T
T ss_pred c
Confidence 3
No 10
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.80 E-value=1.3e-18 Score=162.78 Aligned_cols=260 Identities=18% Similarity=0.165 Sum_probs=152.1
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCCC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELPI 87 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (336)
..||++++.++.||++|++.|+++|+++||+||++++......+.+ .+++++.++. .++.+.........
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~------~g~~~~~~~~----~~~~~~~~~~~~~~ 76 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA------TGPRPVLYHS----TLPGPDADPEAWGS 76 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT------TSCEEEECCC----CSCCTTSCGGGGCS
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh------CCCEEEEcCC----cCccccccccccch
Confidence 3589999999999999999999999999999999998654333322 3778887762 22211111000011
Q ss_pred CchHH---HHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhcCCCCccccCCCCCC
Q 019759 88 HKVPY---LKKAHDLLQLPLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFTGPPSDVIAGRRQKP 164 (336)
Q Consensus 88 ~~~~~---~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (336)
..... +...+......+.+++++.+||+||+|.+..++..+|+++|+|+|.+++...... .+.....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~----~~~~~~~------ 146 (430)
T 2iyf_A 77 TLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWK----GYEEEVA------ 146 (430)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCT----THHHHTH------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccc----ccccccc------
Confidence 11111 1222233455677788888999999999877788999999999999886543100 0000000
Q ss_pred CCcccCCccccCCCccccccccc-cccccCCCCchhHHHHHHHHhcCceEEEEccchhchHhHHHHHHhhhCCC-eeeee
Q 019759 165 EDFTVVPEWIDFQSNLAFKPYET-LINQDGMDDSVSDYLRAAFVLQDCRVVILRSCAEFEPDALRLLGKMLQKP-VLPVG 242 (336)
Q Consensus 165 ~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~l~~~~~p~-v~~VG 242 (336)
..........+. ...+. ..+ .+....... .. .......++.+++++..+++... +..+++ +++||
T Consensus 147 ~~~~~~~~~~~~--~~~~~-~~~~~~~~~~g~~--~~---~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~v~~vG 213 (430)
T 2iyf_A 147 EPMWREPRQTER--GRAYY-ARFEAWLKENGIT--EH---PDTFASHPPRSLVLIPKALQPHA-----DRVDEDVYTFVG 213 (430)
T ss_dssp HHHHHHHHHSHH--HHHHH-HHHHHHHHHTTCC--SC---HHHHHHCCSSEEECSCGGGSTTG-----GGSCTTTEEECC
T ss_pred cchhhhhccchH--HHHHH-HHHHHHHHHhCCC--CC---HHHHhcCCCcEEEeCcHHhCCCc-----ccCCCccEEEeC
Confidence 000000000000 00000 000 000000000 00 00111246788999998888642 234567 99999
Q ss_pred eccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccCCHHHHHHHHHHHHhC-CCceEEEEeCC
Q 019759 243 LLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTLSQELLHELAYGLEKS-GLPFIWIIKNR 309 (336)
Q Consensus 243 pl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~~~~~~~~ia~al~~~-~~~~lW~~r~~ 309 (336)
|.+.... +..+|++..+++++|||++||......+.+.++++++++. +.+|+|.+.+.
T Consensus 214 ~~~~~~~---------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~ 272 (430)
T 2iyf_A 214 ACQGDRA---------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRK 272 (430)
T ss_dssp CCC--------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC--
T ss_pred CcCCCCC---------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 8654211 1346777656789999999999866788899999999986 88999988654
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.76 E-value=1.5e-17 Score=154.86 Aligned_cols=259 Identities=13% Similarity=0.097 Sum_probs=152.5
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCC---CCCC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAE---STAE 84 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~ 84 (336)
..||+|++.++.||++|++.|+++|++|||+|++++++...+.+.+ .++++..++. .++.... ....
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~------~G~~~~~~~~----~~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA------AGATVVPYQS----EIIDADAAEVFGSD 89 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCEEEECCC----STTTCCHHHHHHSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh------cCCEEEeccc----cccccccchhhccc
Confidence 4689999999999999999999999999999999997655444333 3788888762 1111100 0000
Q ss_pred CCCCchHH-HHHHHHHhhHHHHHhhhhcCCcEEEEc-CCCcchHHHHHHcCCceEEEeccchHHHhhcCCCCccccCCCC
Q 019759 85 LPIHKVPY-LKKAHDLLQLPLTNFLQDSRVNWIIHD-FISHWLPPVAAQLGVNSVFFSIYSAATLCFTGPPSDVIAGRRQ 162 (336)
Q Consensus 85 ~~~~~~~~-~~~~~~~~~~~~~~ll~~~~~D~vv~D-~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (336)
........ +..........+.+++++.+||+||+| .+..++..+|+++|+|+|.+.+..... ..+....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~----~~~~~~~----- 160 (415)
T 3rsc_A 90 DLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASN----EHYSFSQ----- 160 (415)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCC----SSCCHHH-----
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEeccccc----Ccccccc-----
Confidence 01111111 222222344567777888899999999 777778889999999999887542210 0000000
Q ss_pred CCCCcccCCcccc-CCCccccccccc-cccccCCCCchhHHHHHHHHhcC-ceEEEEccchhchHhHHHHHHhhhCCCee
Q 019759 163 KPEDFTVVPEWID-FQSNLAFKPYET-LINQDGMDDSVSDYLRAAFVLQD-CRVVILRSCAEFEPDALRLLGKMLQKPVL 239 (336)
Q Consensus 163 ~~~~~~~~~~~~p-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~nt~~~le~~~~~~l~~~~~p~v~ 239 (336)
+.. ..... .+.........+ .+.... +.... ....... .+..++.+-..++.. +...+.++.
T Consensus 161 ---~~~--~~~~~~~p~~~~~~~~~~~~~~~~~---g~~~~--~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~ 225 (415)
T 3rsc_A 161 ---DMV--TLAGTIDPLDLPVFRDTLRDLLAEH---GLSRS--VVDCWNHVEQLNLVFVPKAFQIA-----GDTFDDRFV 225 (415)
T ss_dssp ---HHH--HHHTCCCGGGCHHHHHHHHHHHHHT---TCCCC--HHHHHTCCCSEEEESSCTTTSTT-----GGGCCTTEE
T ss_pred ---ccc--cccccCChhhHHHHHHHHHHHHHHc---CCCCC--hhhhhcCCCCeEEEEcCcccCCC-----cccCCCceE
Confidence 000 00000 000000000000 000000 00000 0011111 256666666666543 223456799
Q ss_pred eeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEeCC
Q 019759 240 PVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTLSQELLHELAYGLEKSGLPFIWIIKNR 309 (336)
Q Consensus 240 ~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~~~~~~~~ia~al~~~~~~~lW~~r~~ 309 (336)
+|||..... .+..+|+...+++.+|||++||......+.+.++++++++.+.+++|...+.
T Consensus 226 ~vGp~~~~~---------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~ 286 (415)
T 3rsc_A 226 FVGPCFDDR---------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQ 286 (415)
T ss_dssp ECCCCCCCC---------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTT
T ss_pred EeCCCCCCc---------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 999987532 2344577666678999999999987777889999999999999999988754
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.76 E-value=2.6e-17 Score=152.27 Aligned_cols=257 Identities=14% Similarity=0.090 Sum_probs=149.2
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELPIH 88 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (336)
.||++++.++.||++|++.|+++|++|||+|+|++++...+.+.. .+++++.++.. ++............
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~------~G~~~~~~~~~----~~~~~~~~~~~~~~ 74 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA------AGAEVVLYKSE----FDTFHVPEVVKQED 74 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH------TTCEEEECCCG----GGTSSSSSSSCCTT
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH------cCCEEEecccc----cccccccccccccc
Confidence 489999999999999999999999999999999998654433333 37888887631 11100000001111
Q ss_pred chHH----HHHHHHHhhHHHHHhhhhcCCcEEEEc-CCCcchHHHHHHcCCceEEEeccchHHHhhcCCCCccccCCCCC
Q 019759 89 KVPY----LKKAHDLLQLPLTNFLQDSRVNWIIHD-FISHWLPPVAAQLGVNSVFFSIYSAATLCFTGPPSDVIAGRRQK 163 (336)
Q Consensus 89 ~~~~----~~~~~~~~~~~~~~ll~~~~~D~vv~D-~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (336)
.... +..........+.+++++.+||+||+| .+..++..+|+++|+|+|.+++..... .......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~----~~~~~~~------ 144 (402)
T 3ia7_A 75 AETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAAN----EHYSLFK------ 144 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCB----TTBCHHH------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccC----ccccccc------
Confidence 1111 222222334567777788899999999 777778889999999999886532210 0000000
Q ss_pred CCCcccCCccccCCCc--cccccccc-cccccCCCCchhHHHHHHHHhcCc-eEEEEccchhchHhHHHHHHhhhCCCee
Q 019759 164 PEDFTVVPEWIDFQSN--LAFKPYET-LINQDGMDDSVSDYLRAAFVLQDC-RVVILRSCAEFEPDALRLLGKMLQKPVL 239 (336)
Q Consensus 164 ~~~~~~~~~~~p~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~nt~~~le~~~~~~l~~~~~p~v~ 239 (336)
.. ......... .......+ .+... .+..... ....... +..++.+-.+++.. +...+.++.
T Consensus 145 --~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~--~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~ 209 (402)
T 3ia7_A 145 --EL---WKSNGQRHPADVEAVHSVLVDLLGK---YGVDTPV--KEYWDEIEGLTIVFLPKSFQPF-----AETFDERFA 209 (402)
T ss_dssp --HH---HHHHTCCCGGGSHHHHHHHHHHHHT---TTCCSCH--HHHHTCCCSCEEESSCGGGSTT-----GGGCCTTEE
T ss_pred --cc---cccccccChhhHHHHHHHHHHHHHH---cCCCCCh--hhhhcCCCCeEEEEcChHhCCc-----cccCCCCeE
Confidence 00 000000000 00000000 00000 0000000 0111112 55555555555533 223456799
Q ss_pred eeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEeCC
Q 019759 240 PVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTLSQELLHELAYGLEKSGLPFIWIIKNR 309 (336)
Q Consensus 240 ~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~~~~~~~~ia~al~~~~~~~lW~~r~~ 309 (336)
+|||...... +...|+...+++.+|||++||......+.+.++++++++.+.+++|...+.
T Consensus 210 ~vGp~~~~~~---------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 270 (402)
T 3ia7_A 210 FVGPTLTGRD---------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGF 270 (402)
T ss_dssp ECCCCCCC-------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTT
T ss_pred EeCCCCCCcc---------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCc
Confidence 9999875321 234577655678899999999987777889999999999999999988764
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.72 E-value=1.1e-17 Score=155.57 Aligned_cols=253 Identities=11% Similarity=0.045 Sum_probs=146.7
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELPIH 88 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (336)
.||+|++.++.||++|++.|+++|.+|||+|+|+++....+.+.+ .++.+..++... +.. .+.. ......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~------~g~~~~~l~~~~-~~~-~~~~--~~~~~~ 70 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE------VGVPMVPVGRAV-RAG-AREP--GELPPG 70 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH------TTCCEEECSSCS-SGG-GSCT--TCCCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH------cCCceeecCCCH-HHH-hccc--cCCHHH
Confidence 378999999999999999999999999999999998655443333 377788776211 111 0000 000111
Q ss_pred chHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcch---HHHHHHcCCceEEEeccchHHHhhcCCCCccccCCCCCCC
Q 019759 89 KVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHWL---PPVAAQLGVNSVFFSIYSAATLCFTGPPSDVIAGRRQKPE 165 (336)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~~---~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (336)
+...+..........+.++.+ ++|+||+|.....+ ..+|+++|+|++.+...+......++.
T Consensus 71 ~~~~~~~~~~~~~~~l~~~~~--~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~------------- 135 (404)
T 3h4t_A 71 AAEVVTEVVAEWFDKVPAAIE--GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQ------------- 135 (404)
T ss_dssp CGGGHHHHHHHHHHHHHHHHT--TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCH-------------
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHH-------------
Confidence 223333333333334444443 69999999765554 678999999999887654321110000
Q ss_pred CcccCCccccCCCcccccc--cccc-ccccC-CCCchhHHHHHHHHhcCceEEEEccchhchHhHHHHHHhhhCCCeeee
Q 019759 166 DFTVVPEWIDFQSNLAFKP--YETL-INQDG-MDDSVSDYLRAAFVLQDCRVVILRSCAEFEPDALRLLGKMLQKPVLPV 241 (336)
Q Consensus 166 ~~~~~~~~~p~~~~~~~~~--~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~l~~~~~p~v~~V 241 (336)
...........+. ..++ +.... ........... ..+..+.++...+.+. +..++++..+
T Consensus 136 ------~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~-----~~~~~l~~~~~~l~p~------~~~~~~~~~~ 198 (404)
T 3h4t_A 136 ------AERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYG-----YTDQPWLAADPVLSPL------RPTDLGTVQT 198 (404)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHH-----HCSSCEECSCTTTSCC------CTTCCSCCBC
T ss_pred ------HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhcc-----ccCCeEEeeCcceeCC------CCCCCCeEEe
Confidence 0000000000000 0000 00000 00000000000 1223355666656532 1134688999
Q ss_pred eeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEeCCC
Q 019759 242 GLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTLSQELLHELAYGLEKSGLPFIWIIKNRP 310 (336)
Q Consensus 242 Gpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~~~~~~~~ia~al~~~~~~~lW~~r~~~ 310 (336)
|+++.+.. . ++++++.+||+. ++++|||+|||+.. +.+.++.++++|++.++++||+.+.++
T Consensus 199 G~~~~~~~-~---~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~ 260 (404)
T 3h4t_A 199 GAWILPDQ-R---PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAG 260 (404)
T ss_dssp CCCCCCCC-C---CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTT
T ss_pred CccccCCC-C---CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 98876432 1 446788899985 46799999999987 788899999999999999999987653
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.68 E-value=3.3e-16 Score=144.26 Aligned_cols=237 Identities=14% Similarity=0.111 Sum_probs=140.6
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCC-CC---CCCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGL-PE---GAESTAE 84 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~---~~~~~~~ 84 (336)
.||++++.++.||++|++.|+++|++|||+||+++++.....+.. .+++++.++.....+. .. +......
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG------VGLPAVATTDLPIRHFITTDREGRPEAIP 74 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCCEEESCSSCHHHHHHBCTTSCBCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh------CCCEEEEeCCcchHHHHhhhcccCccccC
Confidence 379999999999999999999999999999999997643222222 2677777662110000 00 0000000
Q ss_pred CCCCchHHH-----HHHHHHhhHHHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhcCCCCccccC
Q 019759 85 LPIHKVPYL-----KKAHDLLQLPLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFTGPPSDVIAG 159 (336)
Q Consensus 85 ~~~~~~~~~-----~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (336)
........+ ..........+.+++++.+||+||+|.+..++..+|+.+|+|+|.++..+.. .
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------~------ 141 (384)
T 2p6p_A 75 SDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------A------ 141 (384)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-------C------
T ss_pred cchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-------c------
Confidence 000111111 1112223345566677779999999998777888999999999987632100 0
Q ss_pred CCCCCCCcccCCccccCCCccccccccccccccCCCCchhHHHHHH-HHhcCceEEEEccchhchHhHHHHHHhhhC-CC
Q 019759 160 RRQKPEDFTVVPEWIDFQSNLAFKPYETLINQDGMDDSVSDYLRAA-FVLQDCRVVILRSCAEFEPDALRLLGKMLQ-KP 237 (336)
Q Consensus 160 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~nt~~~le~~~~~~l~~~~~-p~ 237 (336)
..+. . .+. ..+ . +...... .....++.+++++...++.+. . .+ .+
T Consensus 142 ------------~~~~--~--~~~-~~~---~-------~~~~~~g~~~~~~~~~~l~~~~~~~~~~~-----~-~~~~~ 188 (384)
T 2p6p_A 142 ------------DGIH--P--GAD-AEL---R-------PELSELGLERLPAPDLFIDICPPSLRPAN-----A-APARM 188 (384)
T ss_dssp ------------TTTH--H--HHH-HHT---H-------HHHHHTTCSSCCCCSEEEECSCGGGSCTT-----S-CCCEE
T ss_pred ------------chhh--H--HHH-HHH---H-------HHHHHcCCCCCCCCCeEEEECCHHHCCCC-----C-CCCCc
Confidence 0000 0 000 000 0 0000000 000125788899988887541 1 11 12
Q ss_pred eeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccC-----CHHHHHHHHHHHHhCCCceEEEEeC
Q 019759 238 VLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTL-----SQELLHELAYGLEKSGLPFIWIIKN 308 (336)
Q Consensus 238 v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~-----~~~~~~~ia~al~~~~~~~lW~~r~ 308 (336)
+.+++. . .+.++.+|++.++++++|||+|||.... +.+.+.+++++|++++++|+|+.+.
T Consensus 189 ~~~~~~---~--------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 253 (384)
T 2p6p_A 189 MRHVAT---S--------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPD 253 (384)
T ss_dssp CCCCCC---C--------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCH
T ss_pred eEecCC---C--------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 333321 0 1235778998766778999999998864 5678899999999999999999764
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.61 E-value=2.3e-15 Score=141.45 Aligned_cols=252 Identities=13% Similarity=0.087 Sum_probs=131.9
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCC-CCCCCCCC-CCC---
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQ-LDGLPEGA-EST--- 82 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~-~~~--- 82 (336)
..||++++.++.||++|++.|+++|.++||+|+|++++...+.+.. .+++++.++... .+++.... ...
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~------~G~~~~~i~~~~~~~~~~~~~~~~~~~~ 93 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA------AGLTAVPVGTDVDLVDFMTHAGHDIIDY 93 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT------TTCCEEECSCCCCHHHHHHHTTHHHHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh------CCCceeecCCccchHHHhhhhhcccccc
Confidence 4689999999999999999999999999999999998654333333 378888876210 00000000 000
Q ss_pred ---CCC----CCC-chHH-------HHHHHH-----H-hhHHHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEEec
Q 019759 83 ---AEL----PIH-KVPY-------LKKAHD-----L-LQLPLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFFSI 141 (336)
Q Consensus 83 ---~~~----~~~-~~~~-------~~~~~~-----~-~~~~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~ 141 (336)
.+. ... .... +...+. . ....+.+++++.+||+||+|.++.++..+|+.+|+|+|.+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~ 173 (441)
T 2yjn_A 94 VRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPHARLLW 173 (441)
T ss_dssp HTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCEEEECS
T ss_pred cccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCEEEEec
Confidence 000 000 0011 111101 0 223344555667999999999877788999999999998854
Q ss_pred cchHHHhhcCCCCccccCCCCCCCCcccCCccccCCCccccccccccccccCCCCchhHHHHHHHHhc---------Cce
Q 019759 142 YSAATLCFTGPPSDVIAGRRQKPEDFTVVPEWIDFQSNLAFKPYETLINQDGMDDSVSDYLRAAFVLQ---------DCR 212 (336)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 212 (336)
.+.........+.. .....|.. .+. + .....+........ ..+
T Consensus 174 ~~~~~~~~~~~~~~--------------~~~~~~~~---~~~--~---------~~~~~l~~~~~~~g~~~~~~~~~~~~ 225 (441)
T 2yjn_A 174 GPDITTRARQNFLG--------------LLPDQPEE---HRE--D---------PLAEWLTWTLEKYGGPAFDEEVVVGQ 225 (441)
T ss_dssp SCCHHHHHHHHHHH--------------HGGGSCTT---TCC--C---------HHHHHHHHHHHHTTCCCCCGGGTSCS
T ss_pred CCCcchhhhhhhhh--------------hccccccc---ccc--c---------hHHHHHHHHHHHcCCCCCCccccCCC
Confidence 32111000000000 00000000 000 0 00011111111110 133
Q ss_pred EEEEccchhchHhHHHHHHhhhCCCeeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccC---CHHHHH
Q 019759 213 VVILRSCAEFEPDALRLLGKMLQKPVLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTL---SQELLH 289 (336)
Q Consensus 213 ~~l~nt~~~le~~~~~~l~~~~~p~v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~---~~~~~~ 289 (336)
..+..+...++.+. ..+ . ..++++... .+.++.+|++..+++++|||++||.... ..+.+.
T Consensus 226 ~~l~~~~~~~~~~~------~~~-~-~~~~~~~~~--------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~ 289 (441)
T 2yjn_A 226 WTIDPAPAAIRLDT------GLK-T-VGMRYVDYN--------GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIE 289 (441)
T ss_dssp SEEECSCGGGSCCC------CCC-E-EECCCCCCC--------SSCCCCGGGSSCCSSCEEEEEC----------CCSTT
T ss_pred eEEEecCccccCCC------CCC-C-CceeeeCCC--------CCcccchHhhcCCCCCEEEEECCCCcccccChHHHHH
Confidence 34444444444210 000 0 122222110 1345778998766789999999998753 446678
Q ss_pred HHHHHHHhCCCceEEEEeCC
Q 019759 290 ELAYGLEKSGLPFIWIIKNR 309 (336)
Q Consensus 290 ~ia~al~~~~~~~lW~~r~~ 309 (336)
+++++|++++.+|||+...+
T Consensus 290 ~~~~al~~~~~~~v~~~g~~ 309 (441)
T 2yjn_A 290 ELLGAVGDVDAEIIATFDAQ 309 (441)
T ss_dssp TTHHHHHTSSSEEEECCCTT
T ss_pred HHHHHHHcCCCEEEEEECCc
Confidence 89999999999999998754
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.57 E-value=1.9e-14 Score=133.27 Aligned_cols=240 Identities=13% Similarity=0.049 Sum_probs=138.7
Q ss_pred CCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCC-----
Q 019759 6 RQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAE----- 80 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----- 80 (336)
++..||+|++.++.||++|++.|+++|.+|||+|+++++ ...+.+.. .+++++.++... .+.....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~------~G~~~~~~~~~~--~~~~~~~~~~~~ 88 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA------AGLEVVDVAPDY--SAVKVFEQVAKD 88 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT------TTCEEEESSTTC--CHHHHHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh------CCCeeEecCCcc--CHHHHhhhcccC
Confidence 344699999999999999999999999999999999998 44333333 378888776210 0000000
Q ss_pred ----------CCCCCCCCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhc
Q 019759 81 ----------STAELPIHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFT 150 (336)
Q Consensus 81 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~ 150 (336)
............+..........+.+++++.+||+||+|.....+..+|+.+|+|+|.+......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~----- 163 (398)
T 3oti_A 89 NPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR----- 163 (398)
T ss_dssp CHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC-----
T ss_pred CccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC-----
Confidence 00000111223333334445567788888889999999987777888999999999876532100
Q ss_pred CCCCccccCCCCCCCCcccCCccccCCCccccccccccccccCCCCchhHHHHHHHHhcCceEEEEccchhchHhHHHHH
Q 019759 151 GPPSDVIAGRRQKPEDFTVVPEWIDFQSNLAFKPYETLINQDGMDDSVSDYLRAAFVLQDCRVVILRSCAEFEPDALRLL 230 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~l 230 (336)
. ..... ... . .+ ......+.......+..+..+...+..+.
T Consensus 164 -~-------------------~~~~~----~~~-~---~l-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 204 (398)
T 3oti_A 164 -T-------------------RGMHR----SIA-S---FL-------TDLMDKHQVSLPEPVATIESFPPSLLLEA---- 204 (398)
T ss_dssp -C-------------------TTHHH----HHH-T---TC-------HHHHHHTTCCCCCCSEEECSSCGGGGTTS----
T ss_pred -c-------------------cchhh----HHH-H---HH-------HHHHHHcCCCCCCCCeEEEeCCHHHCCCC----
Confidence 0 00000 000 0 00 00000000001112333333333333210
Q ss_pred HhhhCCCeeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccC--CHHHHHHHHHHHHhCCCceEEEEeC
Q 019759 231 GKMLQKPVLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTL--SQELLHELAYGLEKSGLPFIWIIKN 308 (336)
Q Consensus 231 ~~~~~p~v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~--~~~~~~~ia~al~~~~~~~lW~~r~ 308 (336)
.+..+.+.- .+. ..+.++.+|++..+++++|||++||.... ..+.+.+++++|++.+.+++|+...
T Consensus 205 ----~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~ 272 (398)
T 3oti_A 205 ----EPEGWFMRW-VPY-------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGD 272 (398)
T ss_dssp ----CCCSBCCCC-CCC-------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTT
T ss_pred ----CCCCCCccc-cCC-------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECC
Confidence 011111110 010 11345667887666788999999999643 5677889999999999999999876
Q ss_pred CC
Q 019759 309 RP 310 (336)
Q Consensus 309 ~~ 310 (336)
++
T Consensus 273 ~~ 274 (398)
T 3oti_A 273 LD 274 (398)
T ss_dssp SC
T ss_pred cC
Confidence 53
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.49 E-value=2e-14 Score=133.07 Aligned_cols=243 Identities=16% Similarity=0.169 Sum_probs=126.8
Q ss_pred CCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCC-CCCCCCCCC--CCC
Q 019759 6 RQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLP-QLDGLPEGA--EST 82 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~--~~~ 82 (336)
+.+.||+|++.++.||++|++.|+++|.+|||+|++++++...+.+.. .++.++.++.. ....+.... ...
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~------~G~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG------AGLPFAPTCPSLDMPEVLSWDREGNR 86 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH------TTCCEEEEESSCCHHHHHSBCTTSCB
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh------CCCeeEecCCccchHhhhhhhccCcc
Confidence 446799999999999999999999999999999999997544333332 25666666410 000000000 000
Q ss_pred CCCCCCc---h----HHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhcCCCCc
Q 019759 83 AELPIHK---V----PYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFTGPPSD 155 (336)
Q Consensus 83 ~~~~~~~---~----~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~ 155 (336)
....... . ..+..........+.+++++.+||+||+|....++..+|+.+|+|+|.+.......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~--------- 157 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASP--------- 157 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC---------
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCc---------
Confidence 0001011 1 11112222234456777788899999999877778889999999998866431100
Q ss_pred cccCCCCCCCCcccCCccccCCCccccccccccccccCCCCchhHHHHHH-HHhcCceEEEEccchhchHhHHHHHHhhh
Q 019759 156 VIAGRRQKPEDFTVVPEWIDFQSNLAFKPYETLINQDGMDDSVSDYLRAA-FVLQDCRVVILRSCAEFEPDALRLLGKML 234 (336)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~nt~~~le~~~~~~l~~~~ 234 (336)
..... .+. +.+ . .....+. ......+..+..+...++...
T Consensus 158 ----------------~~~~~----~~~-~~l---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 198 (398)
T 4fzr_A 158 ----------------ELIKS----AGV-GEL---A-------PELAELGLTDFPDPLLSIDVCPPSMEAQP-------- 198 (398)
T ss_dssp ----------------HHHHH----HHH-HHT---H-------HHHHTTTCSSCCCCSEEEECSCGGGC-----------
T ss_pred ----------------hhhhH----HHH-HHH---H-------HHHHHcCCCCCCCCCeEEEeCChhhCCCC--------
Confidence 00000 000 000 0 0000000 000112333433333333221
Q ss_pred CCCeeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccccC--------CHHHHHHHHHHHHhCCCceEEEE
Q 019759 235 QKPVLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEMTL--------SQELLHELAYGLEKSGLPFIWII 306 (336)
Q Consensus 235 ~p~v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~~~--------~~~~~~~ia~al~~~~~~~lW~~ 306 (336)
.+..+.+..+ +.. ..+.++..|+...+++.+|||++||.... ..+.+.+++++|++.+.+++|+.
T Consensus 199 ~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~ 271 (398)
T 4fzr_A 199 KPGTTKMRYV-PYN------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAV 271 (398)
T ss_dssp -CCCEECCCC-CCC------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECC
T ss_pred CCCCCCeeee-CCC------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEe
Confidence 0112222111 100 01345667887666788999999998643 34668899999999999999998
Q ss_pred eCC
Q 019759 307 KNR 309 (336)
Q Consensus 307 r~~ 309 (336)
..+
T Consensus 272 ~~~ 274 (398)
T 4fzr_A 272 SDK 274 (398)
T ss_dssp CC-
T ss_pred CCc
Confidence 765
No 18
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.43 E-value=5.1e-12 Score=117.10 Aligned_cols=240 Identities=12% Similarity=0.092 Sum_probs=137.5
Q ss_pred CCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCC-------------CC
Q 019759 6 RQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLP-------------QL 72 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------~~ 72 (336)
+.+.||++++.++.||++|++.|+++|+++||+|+++++......+.. .+++++.++.. ..
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~ 91 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK------LGFEPVATGMPVFDGFLAALRIRFDT 91 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCEEEECCCCHHHHHHHHHHHHHSC
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh------cCCceeecCcccccchhhhhhhhhcc
Confidence 556799999999999999999999999999999999998643222222 37788877620 00
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHH-HHHhhHHHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhcC
Q 019759 73 DGLPEGAESTAELPIHKVPYLKKA-HDLLQLPLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFTG 151 (336)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~ 151 (336)
...+. ... ..........+... .......+.+++++.+||+||+|.....+..+|+.+|+|+|.+.......
T Consensus 92 ~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~----- 164 (412)
T 3otg_A 92 DSPEG-LTP-EQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP----- 164 (412)
T ss_dssp SCCTT-CCH-HHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC-----
T ss_pred cCCcc-CCh-hHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc-----
Confidence 00000 000 00000111122211 12233566777788899999999877667788999999998764321100
Q ss_pred CCCccccCCCCCCCCcccCCccccCCCccccccccccccccCCCCchhHHHHHHHH----------hcCceEEEEccchh
Q 019759 152 PPSDVIAGRRQKPEDFTVVPEWIDFQSNLAFKPYETLINQDGMDDSVSDYLRAAFV----------LQDCRVVILRSCAE 221 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~nt~~~ 221 (336)
.... ..+. ..+...... ...++.++..+-.+
T Consensus 165 --------------------~~~~----~~~~---------------~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~ 205 (412)
T 3otg_A 165 --------------------DDLT----RSIE---------------EEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPS 205 (412)
T ss_dssp --------------------SHHH----HHHH---------------HHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGG
T ss_pred --------------------hhhh----HHHH---------------HHHHHHHHHcCCCCCcccccCCCCeEEeeCCHH
Confidence 0000 0000 000000000 12345555555555
Q ss_pred chHhHHHHHHhhhCCCeeeeeeccCCCCCCCCCCCccccccc-cccCCCCeEEEEEeCccccCCHHHHHHHHHHHHhCCC
Q 019759 222 FEPDALRLLGKMLQKPVLPVGLLAPSLQDSAAGEHWPVLKDW-LDSKENNSVVYAAFGTEMTLSQELLHELAYGLEKSGL 300 (336)
Q Consensus 222 le~~~~~~l~~~~~p~v~~VGpl~~~~~~~~~~~~~~~l~~w-Ld~~~~~~VVyvSfGS~~~~~~~~~~~ia~al~~~~~ 300 (336)
++... ........ |+..... ....+...| ....+++.+||+++||...-..+.+.++++++++.+.
T Consensus 206 ~~~~~-----~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~ 272 (412)
T 3otg_A 206 LQEPE-----FRARPRRH---ELRPVPF-----AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDA 272 (412)
T ss_dssp GSCHH-----HHTCTTEE---ECCCCCC-----CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSS
T ss_pred hcCCc-----ccCCCCcc---eeeccCC-----CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCC
Confidence 54321 11111111 2211111 112345567 3323567899999999976677889999999999999
Q ss_pred ceEEEEeCCC
Q 019759 301 PFIWIIKNRP 310 (336)
Q Consensus 301 ~~lW~~r~~~ 310 (336)
+++|+.....
T Consensus 273 ~~~~~~g~~~ 282 (412)
T 3otg_A 273 DVLVASGPSL 282 (412)
T ss_dssp EEEEECCSSC
T ss_pred EEEEEECCCC
Confidence 9999987653
No 19
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.42 E-value=1.4e-12 Score=120.27 Aligned_cols=236 Identities=11% Similarity=0.061 Sum_probs=132.0
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEec-CCCC-CC-C----CCCCCC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQL-PLPQ-LD-G----LPEGAE 80 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~-~----~~~~~~ 80 (336)
+.||+|++.++.||++|++.|+++|.+|||+|+++++....+.+.. .+++++.+ ..+. .. . .+....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG------AGLTTAGIRGNDRTGDTGGTTQLRFPNP 74 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH------BTCEEEEC--------------CCSCCG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh------CCCceeeecCCccchhhhhhhccccccc
Confidence 3689999999999999999999999999999999997543322222 26677766 3110 00 0 000000
Q ss_pred CCCCCCC-CchHHHHHHHHHh-------hHHHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEEeccchHHHhhcCC
Q 019759 81 STAELPI-HKVPYLKKAHDLL-------QLPLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFFSIYSAATLCFTGP 152 (336)
Q Consensus 81 ~~~~~~~-~~~~~~~~~~~~~-------~~~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~ 152 (336)
....... .....+......+ ...+.+++++.+||+||+|.+...+..+|+.+|+|+|.+...... .
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~------~ 148 (391)
T 3tsa_A 75 AFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP------T 148 (391)
T ss_dssp GGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC------T
T ss_pred ccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc------c
Confidence 0000000 1111222222223 456677788889999999987666778899999999887532100 0
Q ss_pred CCccccCCCCCCCCcccCCccccCCCccccccccccccccCCCCchhHHHHHHHHh-----cCceEEEEccchhchHhHH
Q 019759 153 PSDVIAGRRQKPEDFTVVPEWIDFQSNLAFKPYETLINQDGMDDSVSDYLRAAFVL-----QDCRVVILRSCAEFEPDAL 227 (336)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~nt~~~le~~~~ 227 (336)
...+.. .+. .......... ...+.++..+..+++...
T Consensus 149 ------------------~~~~~~----~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 190 (391)
T 3tsa_A 149 ------------------AGPFSD----RAH---------------ELLDPVCRHHGLTGLPTPELILDPCPPSLQASD- 190 (391)
T ss_dssp ------------------TTHHHH----HHH---------------HHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTT-
T ss_pred ------------------cccccc----hHH---------------HHHHHHHHHcCCCCCCCCceEEEecChhhcCCC-
Confidence 000000 000 1111111111 112444555555444220
Q ss_pred HHHHhhhCCCeeeeeeccCCCCCCCCCCCccccccccccCCCCeEEEEEeCccc---cCCHHHHHHHHHHHHhC-CCceE
Q 019759 228 RLLGKMLQKPVLPVGLLAPSLQDSAAGEHWPVLKDWLDSKENNSVVYAAFGTEM---TLSQELLHELAYGLEKS-GLPFI 303 (336)
Q Consensus 228 ~~l~~~~~p~v~~VGpl~~~~~~~~~~~~~~~l~~wLd~~~~~~VVyvSfGS~~---~~~~~~~~~ia~al~~~-~~~~l 303 (336)
......+.++ | . ..+..+..|+...+++.+|||++||.. ..+.+.+++++++ ++. +.+|+
T Consensus 191 ----~~~~~~~~~~-p-----~-----~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v 254 (391)
T 3tsa_A 191 ----APQGAPVQYV-P-----Y-----NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAV 254 (391)
T ss_dssp ----SCCCEECCCC-C-----C-----CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEE
T ss_pred ----CCccCCeeee-c-----C-----CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEE
Confidence 0000011222 1 1 112345678876667899999999985 3557788889999 888 77899
Q ss_pred EEEeCC
Q 019759 304 WIIKNR 309 (336)
Q Consensus 304 W~~r~~ 309 (336)
|+...+
T Consensus 255 ~~~~~~ 260 (391)
T 3tsa_A 255 IAVPPE 260 (391)
T ss_dssp EECCGG
T ss_pred EEECCc
Confidence 997654
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.63 E-value=1.6e-07 Score=85.72 Aligned_cols=116 Identities=16% Similarity=0.152 Sum_probs=71.0
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCC--CCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNID--RLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELP 86 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 86 (336)
.+|+|...+.-||++|.++||++|.+|||+|+|+++....+ .+++ .++.++.++. .+++.. . .....
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~------~g~~~~~i~~---~~~~~~-~-~~~~~ 71 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK------AGLPLHLIQV---SGLRGK-G-LKSLV 71 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG------GTCCEEECC------------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh------cCCcEEEEEC---CCcCCC-C-HHHHH
Confidence 47888776656999999999999999999999998754321 1222 2677777763 222110 0 00000
Q ss_pred CCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcc--hHHHHHHcCCceEEEe
Q 019759 87 IHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHW--LPPVAAQLGVNSVFFS 140 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~--~~~vA~~~~iP~v~~~ 140 (336)
...... ... .....+++++.+||+||.+..+.. +...|+.+++|++..-
T Consensus 72 ~~~~~~----~~~-~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe 122 (365)
T 3s2u_A 72 KAPLEL----LKS-LFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHE 122 (365)
T ss_dssp -CHHHH----HHH-HHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHH----HHH-HHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEe
Confidence 001111 111 123456778889999999975554 3456889999999763
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=97.77 E-value=1.7e-05 Score=63.59 Aligned_cols=55 Identities=18% Similarity=0.320 Sum_probs=48.2
Q ss_pred CCccccccccccCCCCeEEEEEeCccc-cCCHHHHHHHHHHHHhCCCceEEEEeCC
Q 019759 255 EHWPVLKDWLDSKENNSVVYAAFGTEM-TLSQELLHELAYGLEKSGLPFIWIIKNR 309 (336)
Q Consensus 255 ~~~~~l~~wLd~~~~~~VVyvSfGS~~-~~~~~~~~~ia~al~~~~~~~lW~~r~~ 309 (336)
+++.++.+|+++++++++|||+|||.. ..+.+.+.+++++|++.+++|+|+...+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~ 61 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN 61 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc
Confidence 457889999998767899999999986 5688899999999999999999998765
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.74 E-value=0.00017 Score=64.98 Aligned_cols=117 Identities=14% Similarity=0.109 Sum_probs=72.6
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCC--CCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNID--RLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELP 86 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 86 (336)
.+|+++..+..||..++..|+++|+++||+|++++...... .+.. .+++++.++.. .+... . .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~------~g~~~~~~~~~---~~~~~-----~-~ 71 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK------HGIEIDFIRIS---GLRGK-----G-I 71 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG------GTCEEEECCCC---CCTTC-----C-H
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc------cCCceEEecCC---ccCcC-----c-c
Confidence 68999987767999999999999999999999998754211 1111 26777766532 11110 0 0
Q ss_pred CCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCc--chHHHHHHcCCceEEEec
Q 019759 87 IHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISH--WLPPVAAQLGVNSVFFSI 141 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~--~~~~vA~~~~iP~v~~~~ 141 (336)
........... .....+.+++++.+||+|+++.... .+..+++..++|+|....
T Consensus 72 ~~~~~~~~~~~-~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 72 KALIAAPLRIF-NAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp HHHHTCHHHHH-HHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 00000000011 1223455667777999999986432 244677889999986543
No 23
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.76 E-value=0.017 Score=52.85 Aligned_cols=40 Identities=15% Similarity=0.256 Sum_probs=31.7
Q ss_pred CceEEEEEcCC-----CccchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019759 7 QKLHIAMFPWL-----AYGHIMPFFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 7 ~~~~il~~~~p-----~~gH~~p~l~la~~La~rGh~VT~~t~~~ 46 (336)
++.+|+++... ..|--.-+..|+++|+++||+|+++++..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~ 45 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSH 45 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 45788888732 34666679999999999999999999653
No 24
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.20 E-value=0.015 Score=53.47 Aligned_cols=121 Identities=13% Similarity=0.110 Sum_probs=66.5
Q ss_pred CceEEEEEcC---C--------CccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCC
Q 019759 7 QKLHIAMFPW---L--------AYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGL 75 (336)
Q Consensus 7 ~~~~il~~~~---p--------~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 75 (336)
+..+|+++.. | ..|+-..+..|+++|+++||+|++++....... ... .....+++++.++......+
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~~~-~~~~~~v~v~~~~~~~~~~~ 96 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQ-GEI-VRVAENLRVINIAAGPYEGL 96 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGG-CSE-EEEETTEEEEEECCSCSSSC
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCC-ccc-ccccCCeEEEEecCCCcccc
Confidence 3468999884 2 358889999999999999999999986532111 000 00114677776662111111
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHhhHHHHHh-hhhc-CCcEEEEcCCCcc--hHHHHHHcCCceEEEecc
Q 019759 76 PEGAESTAELPIHKVPYLKKAHDLLQLPLTNF-LQDS-RVNWIIHDFISHW--LPPVAAQLGVNSVFFSIY 142 (336)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-l~~~-~~D~vv~D~~~~~--~~~vA~~~~iP~v~~~~~ 142 (336)
. .......+... ...+.+. ++.. +||+|++...... +..+++.+++|+|.....
T Consensus 97 ~---------~~~~~~~~~~~----~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 154 (438)
T 3c48_A 97 S---------KEELPTQLAAF----TGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHT 154 (438)
T ss_dssp C---------GGGGGGGHHHH----HHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred c---------hhHHHHHHHHH----HHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecC
Confidence 0 00111111111 1122222 3333 4999998764322 234677889998876543
No 25
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=96.08 E-value=0.086 Score=47.54 Aligned_cols=114 Identities=16% Similarity=0.182 Sum_probs=64.7
Q ss_pred ceEEEEEcCCCc-cchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCC
Q 019759 8 KLHIAMFPWLAY-GHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELP 86 (336)
Q Consensus 8 ~~~il~~~~p~~-gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 86 (336)
|+++....+|.. |.-.-...|+++|+++||+|++++...... ... ...++.+..++.. .++. .. ...
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~----~~~~i~~~~~~~~---~~~~-~~---~~~ 82 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK----VYPNIYFHEVTVN---QYSV-FQ---YPP 82 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C----CCTTEEEECCCCC--------CC---SCC
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc----cCCceEEEecccc---cccc-cc---ccc
Confidence 456777777654 677889999999999999999998753221 111 1246777665521 1110 00 000
Q ss_pred CCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcc--hHHHHHHc---CCceEEEecc
Q 019759 87 IHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHW--LPPVAAQL---GVNSVFFSIY 142 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~--~~~vA~~~---~iP~v~~~~~ 142 (336)
+.. .....+.+++++.+||+|++....+. +..+++++ ++|+|.....
T Consensus 83 -----~~~----~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 134 (394)
T 2jjm_A 83 -----YDL----ALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHG 134 (394)
T ss_dssp -----HHH----HHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCH
T ss_pred -----ccH----HHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEec
Confidence 100 11234556667779999999764433 23445443 5898876543
No 26
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=95.96 E-value=0.031 Score=52.35 Aligned_cols=122 Identities=17% Similarity=0.193 Sum_probs=68.8
Q ss_pred ceEEEEEcCC---------------CccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCC---CCCC--CCCeEEEec
Q 019759 8 KLHIAMFPWL---------------AYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQI---PTNL--SSRLSYIQL 67 (336)
Q Consensus 8 ~~~il~~~~p---------------~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~---~~~~--~~~i~~~~~ 67 (336)
..+|+++... ..|.-..+..|+++|+++||+|++++........... .... ..+++++.+
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEe
Confidence 4788888742 3477788999999999999999999864322110000 0001 247787777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHhhHHHHHhhhh--cCCcEEEEcCCCcc--hHHHHHHcCCceEEEecc
Q 019759 68 PLPQLDGLPEGAESTAELPIHKVPYLKKAHDLLQLPLTNFLQD--SRVNWIIHDFISHW--LPPVAAQLGVNSVFFSIY 142 (336)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~--~~~D~vv~D~~~~~--~~~vA~~~~iP~v~~~~~ 142 (336)
+......+. ......++.. ....+.+++++ .+||+|.+...... +..+++..++|+|.....
T Consensus 87 ~~~~~~~~~---------~~~~~~~~~~----~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~ 152 (499)
T 2r60_A 87 PFGGDKFLP---------KEELWPYLHE----YVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152 (499)
T ss_dssp CCSCSSCCC---------GGGCGGGHHH----HHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSS
T ss_pred cCCCcCCcC---------HHHHHHHHHH----HHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccC
Confidence 632110000 0001111111 11234455655 47999998764322 234677889998875543
No 27
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=94.85 E-value=0.067 Score=47.21 Aligned_cols=92 Identities=16% Similarity=0.104 Sum_probs=59.1
Q ss_pred ceEEEEEcCC----------------CccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCC
Q 019759 8 KLHIAMFPWL----------------AYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQ 71 (336)
Q Consensus 8 ~~~il~~~~p----------------~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 71 (336)
+.+|+++... ..|.-.-...+++.|+++||+|++++....... ..++++...+
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~--------~~~~~~~~~~--- 71 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG--------RPGLTVVPAG--- 71 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC--------STTEEECSCC---
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC--------CCcceeccCC---
Confidence 3577777754 257778899999999999999999987533211 0233332110
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEEe
Q 019759 72 LDGLPEGAESTAELPIHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFFS 140 (336)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~ 140 (336)
.+ ..+.+++++.++|+|++........ +++..++| |...
T Consensus 72 -------------------~~---------~~l~~~l~~~~~Dvi~~~~~~~~~~-~~~~~~~p-v~~~ 110 (342)
T 2iuy_A 72 -------------------EP---------EEIERWLRTADVDVVHDHSGGVIGP-AGLPPGTA-FISS 110 (342)
T ss_dssp -------------------SH---------HHHHHHHHHCCCSEEEECSSSSSCS-TTCCTTCE-EEEE
T ss_pred -------------------cH---------HHHHHHHHhcCCCEEEECCchhhHH-HHhhcCCC-EEEe
Confidence 00 0455666777999999987544322 26778899 6544
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=94.83 E-value=0.16 Score=45.77 Aligned_cols=115 Identities=16% Similarity=0.107 Sum_probs=62.9
Q ss_pred CceEEEEEcC---CC-ccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCC
Q 019759 7 QKLHIAMFPW---LA-YGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAEST 82 (336)
Q Consensus 7 ~~~~il~~~~---p~-~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (336)
+..+|+++.. +. .|+-.-+..++++|+++||+|++++............. ..+ +++.++. .. ..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~--~~~-~~~~~~~---~~---~~--- 86 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV--SGG-KAVPIPY---NG---SV--- 86 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE--ECC-CCC-----------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc--cCC-cEEeccc---cC---Cc---
Confidence 3467888873 22 46778899999999999999999997544321111100 001 1111110 00 00
Q ss_pred CCCCCCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcc--hHHHHHHcCCceEEEecc
Q 019759 83 AELPIHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHW--LPPVAAQLGVNSVFFSIY 142 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~--~~~vA~~~~iP~v~~~~~ 142 (336)
...... . .....+.+++++.+||+|++...... +..+++..++|+|.....
T Consensus 87 ~~~~~~-----~----~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 139 (406)
T 2gek_A 87 ARLRFG-----P----ATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHT 139 (406)
T ss_dssp ----CC-----H----HHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECC
T ss_pred cccccc-----H----HHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcC
Confidence 000000 0 01234556677778999998875444 345667779999876543
No 29
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=93.09 E-value=0.43 Score=42.25 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=51.9
Q ss_pred EEEEEcC---CCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCC
Q 019759 10 HIAMFPW---LAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELP 86 (336)
Q Consensus 10 ~il~~~~---p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 86 (336)
+|+++.. +..|.-..+..++++|+++||+|++++...... . ..+++++.++.. .. .
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~-~-------~~~~~v~~~~~~---~~----------~ 60 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGD-C-------PKAFELIQVPVK---SH----------T 60 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSC-C-------CTTCEEEECCCC---CS----------S
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCC-C-------CCCcEEEEEccC---cc----------c
Confidence 4666642 445788889999999999999999998743221 1 136677666521 10 0
Q ss_pred CCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcC
Q 019759 87 IHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDF 120 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~ 120 (336)
.. .. .......+.+++++.+||+|++-.
T Consensus 61 -~~-~~----~~~~~~~l~~~i~~~~~Dvv~~~~ 88 (374)
T 2iw1_A 61 -NH-GR----NAEYYAWVQNHLKEHPADRVVGFN 88 (374)
T ss_dssp -HH-HH----HHHHHHHHHHHHHHSCCSEEEESS
T ss_pred -ch-hh----HHHHHHHHHHHHhccCCCEEEEec
Confidence 00 00 111223456677777999998754
No 30
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=92.96 E-value=0.2 Score=44.80 Aligned_cols=106 Identities=9% Similarity=0.093 Sum_probs=64.2
Q ss_pred ceEEEEEcC--C--CccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCC
Q 019759 8 KLHIAMFPW--L--AYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTA 83 (336)
Q Consensus 8 ~~~il~~~~--p--~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (336)
+.+|+++.. + ..|+-..+..+++.| +||+|++++........... ....++.++.++. ...
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~------- 68 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY--DKTLDYEVIRWPR----SVM------- 68 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH--HTTCSSEEEEESS----SSC-------
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh--ccccceEEEEccc----ccc-------
Confidence 467888764 3 358888899999999 79999999875432100000 0013566666651 100
Q ss_pred CCCCCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcc--hHHHHHHcCCceEEE
Q 019759 84 ELPIHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHW--LPPVAAQLGVNSVFF 139 (336)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~--~~~vA~~~~iP~v~~ 139 (336)
.. .. .....+.+++++.++|+|++....+. ...+++++++|.+++
T Consensus 69 -~~--~~--------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 69 -LP--TP--------TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp -CS--CH--------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred -cc--ch--------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 00 00 11234566777779999998764433 456788999985443
No 31
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=91.32 E-value=0.67 Score=46.27 Aligned_cols=126 Identities=13% Similarity=0.208 Sum_probs=64.1
Q ss_pred eEEEEEcCCCc-------------cchHHHH--------HHHHHHHhCCCeEE----EEeCCCCCCCCCCCCC---CC--
Q 019759 9 LHIAMFPWLAY-------------GHIMPFF--------QVAMFLAEKGHHVS----YISTPKNIDRLPQIPT---NL-- 58 (336)
Q Consensus 9 ~~il~~~~p~~-------------gH~~p~l--------~la~~La~rGh~VT----~~t~~~~~~~~~~~~~---~~-- 58 (336)
.+|++++..|. |...-.+ +|+++|+++||+|| ++|.......-....+ ..
T Consensus 279 ~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~ 358 (816)
T 3s28_A 279 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYD 358 (816)
T ss_dssp CEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTT
T ss_pred eEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceeecC
Confidence 56777776554 5455555 47788888999987 8875432211111100 01
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHhhHHHHHhhhh--cCCcEEEEcCCCcc--hHHHHHHcCC
Q 019759 59 SSRLSYIQLPLPQLDGLPEGAESTAELPIHKVPYLKKAHDLLQLPLTNFLQD--SRVNWIIHDFISHW--LPPVAAQLGV 134 (336)
Q Consensus 59 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~--~~~D~vv~D~~~~~--~~~vA~~~~i 134 (336)
..+++++.+|+...+++-...-... .+..++..+.. ..+..+++. .+||+|.+...... +..+++.+|+
T Consensus 359 ~~gv~I~RvP~~~~~g~l~~~l~k~----~L~~~L~~F~~---~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gv 431 (816)
T 3s28_A 359 SEYCDILRVPFRTEKGIVRKWISRF----EVWPYLETYTE---DAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGV 431 (816)
T ss_dssp CSSEEEEEECEEETTEEECSCCCTT----TCGGGHHHHHH---HHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTC
T ss_pred cCCeEEEEecCCCccccccccccHH----HHHHHHHHHHH---HHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCC
Confidence 1377777777422111000011111 11222222221 223333333 37999988643222 3467889999
Q ss_pred ceEEEec
Q 019759 135 NSVFFSI 141 (336)
Q Consensus 135 P~v~~~~ 141 (336)
|.|...-
T Consensus 432 P~V~T~H 438 (816)
T 3s28_A 432 TQCTIAH 438 (816)
T ss_dssp CEEEECS
T ss_pred CEEEEEe
Confidence 9987643
No 32
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=90.53 E-value=2.5 Score=35.69 Aligned_cols=113 Identities=14% Similarity=0.169 Sum_probs=61.0
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCc
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELPIHK 89 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (336)
|||+.--=|. |.--+..|++.|.+.| +|+++.+....+-.-... +....+++..... ... ......+
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si-T~~~pl~~~~~~~---~~~----~~v~GTP--- 69 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL-TFTEPLKMRKIDT---DFY----TVIDGTP--- 69 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC-CCSSCEEEEEEET---TEE----EETTCCH---
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc-CCCCCceeEEeec---cce----eecCCCh---
Confidence 4555543332 2233788999999998 599998865543222211 1123455544321 000 0001111
Q ss_pred hHHHHHHHHHhhHHHHHhhhhcCCcEEEE----------cCCCcchH---HHHHHcCCceEEEecc
Q 019759 90 VPYLKKAHDLLQLPLTNFLQDSRVNWIIH----------DFISHWLP---PVAAQLGVNSVFFSIY 142 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~~ll~~~~~D~vv~----------D~~~~~~~---~vA~~~~iP~v~~~~~ 142 (336)
..| ..-.+..++.+.+||+||+ |.+++..+ .-|..+|+|.|.++-.
T Consensus 70 -----aDC--V~lal~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 70 -----ADC--VHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp -----HHH--HHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -----HHH--HhhhhhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 011 1123444566668999999 55555543 4467899999998843
No 33
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=90.26 E-value=0.28 Score=46.53 Aligned_cols=45 Identities=18% Similarity=0.112 Sum_probs=31.4
Q ss_pred CCCCC-CCceEEEEEcC---CC---ccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 1 MDLQN-RQKLHIAMFPW---LA---YGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 1 ~~~~~-~~~~~il~~~~---p~---~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
|.+-+ ..++||++++. |. -|--...-+|.++|+++||+|++++|.
T Consensus 1 ~~~~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 1 MAHHHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -------CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 44444 55789999974 32 244567889999999999999999964
No 34
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=89.69 E-value=0.47 Score=42.29 Aligned_cols=111 Identities=8% Similarity=-0.060 Sum_probs=58.6
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCC-eEEEEeCCCCCCCCCCCCCCCCCCeEE-EecCCCCCCCCCCCCCCCCCCCC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGH-HVSYISTPKNIDRLPQIPTNLSSRLSY-IQLPLPQLDGLPEGAESTAELPI 87 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh-~VT~~t~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~ 87 (336)
+|++++ ...++...+..|+++|.++|+ ++.++.+............. .++.+ ..++. .+ . ..
T Consensus 2 kIl~v~-~~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~--~--------~~ 65 (384)
T 1vgv_A 2 KVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKL--FSIVPDYDLNI---MQ--P--------GQ 65 (384)
T ss_dssp EEEEEE-CSHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHH--HTCCCSEECCC---CS--T--------TS
T ss_pred eEEEEe-cccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHH--cCCCCCcceec---CC--C--------Cc
Confidence 577765 346778888999999999994 88766442221111000000 02221 12221 00 0 00
Q ss_pred CchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcC--CCcc-hHHHHHHcCCceEEEe
Q 019759 88 HKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDF--ISHW-LPPVAAQLGVNSVFFS 140 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~--~~~~-~~~vA~~~~iP~v~~~ 140 (336)
.....+ ......+.+++++.+||+|++-. ...+ +..+|+..++|+|...
T Consensus 66 ~~~~~~----~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 117 (384)
T 1vgv_A 66 GLTEIT----CRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVE 117 (384)
T ss_dssp CHHHHH----HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEES
T ss_pred cHHHHH----HHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEe
Confidence 111111 11234566777788999999843 2233 3356778899987653
No 35
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=88.95 E-value=1.3 Score=39.39 Aligned_cols=111 Identities=10% Similarity=0.009 Sum_probs=57.0
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhC-CCeEEEEeCCCCCCCCCCCCCCCCCCeEE-EecCCCCCCCCCCCCCCCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEK-GHHVSYISTPKNIDRLPQIPTNLSSRLSY-IQLPLPQLDGLPEGAESTAELP 86 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~r-Gh~VT~~t~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~ 86 (336)
.+|+++... .+.......++++|.++ ||+|.++++............. -++.+ ..++.. + . ..
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~-----~---~~- 70 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSL--FGIQEDRNLDVM---Q-----E---RQ- 70 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHT--TTCCCSEECCCC---S-----S---CC-
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHH--cCCCcccccccC---C-----C---Cc-
Confidence 578887732 33345567889999998 7998877653221100000000 12221 122210 0 0 00
Q ss_pred CCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEc--CCCcc-hHHHHHHcCCceEEE
Q 019759 87 IHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHD--FISHW-LPPVAAQLGVNSVFF 139 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D--~~~~~-~~~vA~~~~iP~v~~ 139 (336)
.....+. .....+.+++++.+||+|++- ....+ +..+|+.+++|++.+
T Consensus 71 -~~~~~~~----~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~ 121 (376)
T 1v4v_A 71 -ALPDLAA----RILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHV 121 (376)
T ss_dssp -CHHHHHH----HHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEE
T ss_pred -cHHHHHH----HHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEEEE
Confidence 0111111 122346667778899999983 23333 346788899998754
No 36
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=87.98 E-value=3.8 Score=33.07 Aligned_cols=40 Identities=20% Similarity=0.178 Sum_probs=35.5
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~ 46 (336)
++..|++++..|.|=..-.+.+|.+.+.+|++|-|+..-+
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~K 66 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 66 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeC
Confidence 4457899999999999999999999999999999997643
No 37
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=87.13 E-value=8.2 Score=32.43 Aligned_cols=114 Identities=12% Similarity=0.147 Sum_probs=62.1
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELPIH 88 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (336)
.||++.--=|. |.--+..|++.|.+.| +|+++.+....+-.-... +....+++..+. .+.. + .....+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-t~~~pl~~~~~~----~~~~--~-~v~GTP-- 69 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL-TFTEPLKMRKID----TDFY--T-VIDGTP-- 69 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC-CCSSCEEEEEEE----TTEE--E-ETTCCH--
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce-ecCCCeEEEEec----CCCe--E-EECCCH--
Confidence 35666554333 3445889999999988 999999876543322211 122345555443 1110 0 001111
Q ss_pred chHHHHHHHHHhhHHHHHhhhhcCCcEEEEc----------CCCcchH---HHHHHcCCceEEEecc
Q 019759 89 KVPYLKKAHDLLQLPLTNFLQDSRVNWIIHD----------FISHWLP---PVAAQLGVNSVFFSIY 142 (336)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D----------~~~~~~~---~vA~~~~iP~v~~~~~ 142 (336)
. .| ..-.+..++.+.+||+||+- .+++..+ .-|..+|+|.|.++-.
T Consensus 70 ---a---DC--V~lal~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 70 ---A---DC--VHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp ---H---HH--HHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ---H---HH--HHHHHHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 0 01 11233445543579999984 4444433 3467899999998753
No 38
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=87.07 E-value=2.5 Score=37.24 Aligned_cols=112 Identities=7% Similarity=-0.036 Sum_probs=59.0
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhC-C-CeEEEEeCCCCCCCCCCCCCCCCCCeEE-EecCCCCCCCCCCCCCCCCC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEK-G-HHVSYISTPKNIDRLPQIPTNLSSRLSY-IQLPLPQLDGLPEGAESTAE 84 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~r-G-h~VT~~t~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~ 84 (336)
+.+|+++. ...++......++++|+++ | |+|+++++............. .++.. ..++. .. + .
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~-~-------~ 73 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSI--FGITPDFDLNI---MK-D-------R 73 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHH--HTCCCSEECCC---CC-T-------T
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHH--cCCCCcccccc---CC-C-------c
Confidence 46888887 3467788888999999987 5 888777654322111000000 01111 11110 00 0 0
Q ss_pred CCCCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcc---hHHHHHHcCCceEEE
Q 019759 85 LPIHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHW---LPPVAAQLGVNSVFF 139 (336)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~---~~~vA~~~~iP~v~~ 139 (336)
. .....+. .....+.+++++.+||+|++...... +..+|+..++|+|.+
T Consensus 74 ~--~~~~~~~----~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~ 125 (375)
T 3beo_A 74 Q--TLIDITT----RGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHV 125 (375)
T ss_dssp C--CHHHHHH----HHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEE
T ss_pred c--cHHHHHH----HHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEE
Confidence 0 0111111 12234566777789999999543211 224678889998854
No 39
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=86.99 E-value=0.7 Score=41.88 Aligned_cols=115 Identities=9% Similarity=0.009 Sum_probs=61.2
Q ss_pred CCceEEEEEcCCCccchHHHHHHHHHHHhC-CCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCC-CCCCCCCCCCCCCC
Q 019759 6 RQKLHIAMFPWLAYGHIMPFFQVAMFLAEK-GHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPL-PQLDGLPEGAESTA 83 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p~l~la~~La~r-Gh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~ 83 (336)
.+..+|+++. ...+...=+..|.++|.++ |+++.++.+-.+.+.... .+ ..+.+ +.. .+.- ..
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~-------~~--~~~~i~~~~-~l~~--~~-- 87 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQ-------VL--ELFSITPDF-DLNI--ME-- 87 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHH-------HH--HHTTCCCSE-ECCC--CC--
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHH-------HH--HhcCCCCce-eeec--CC--
Confidence 3445777766 6667778888899999987 788875554333210000 01 11111 000 1100 00
Q ss_pred CCCCCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcC--CCcch-HHHHHHcCCceEEEe
Q 019759 84 ELPIHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDF--ISHWL-PPVAAQLGVNSVFFS 140 (336)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~--~~~~~-~~vA~~~~iP~v~~~ 140 (336)
....... ........+.+++++.+||+|++-. ...++ ...|++.+||++.+.
T Consensus 88 -~~~~~~~----~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 88 -PGQTLNG----VTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp -TTCCHHH----HHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred -CCCCHHH----HHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 0001111 1222345677788888999998732 33243 467889999987653
No 40
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=86.03 E-value=1.5 Score=37.67 Aligned_cols=86 Identities=20% Similarity=0.298 Sum_probs=52.1
Q ss_pred CCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 019759 16 WLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELPIHKVPYLKK 95 (336)
Q Consensus 16 ~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (336)
.-|.||+.=.+.||++|. +|+|++.......+... ++.+..++ . . +
T Consensus 12 ~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~~------g~~v~~l~----~---~------d----------- 57 (282)
T 3hbm_A 12 QIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDEI------PYPVYELS----S---E------S----------- 57 (282)
T ss_dssp TTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGGC------CSCEEECS----S---S------C-----------
T ss_pred CccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHHC------CCeEEEcC----c---c------C-----------
Confidence 356799999999999999 79999754322221111 33333332 0 0 0
Q ss_pred HHHHhhHHHHHhhhhcCCcEEEEcCCCcchH--HHHHH-cCCceEEEe
Q 019759 96 AHDLLQLPLTNFLQDSRVNWIIHDFISHWLP--PVAAQ-LGVNSVFFS 140 (336)
Q Consensus 96 ~~~~~~~~~~~ll~~~~~D~vv~D~~~~~~~--~vA~~-~~iP~v~~~ 140 (336)
.+.+.+++++.++|+||.|....... ...+. .+++++.+=
T Consensus 58 -----~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iD 100 (282)
T 3hbm_A 58 -----IYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFD 100 (282)
T ss_dssp -----HHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHHHCCEEEEEC
T ss_pred -----HHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHhcCcEEEEEe
Confidence 02244455666899999999766543 23333 478877664
No 41
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=84.75 E-value=0.64 Score=42.44 Aligned_cols=41 Identities=12% Similarity=0.025 Sum_probs=29.7
Q ss_pred CCceEEEEEcCC-Cc----cchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019759 6 RQKLHIAMFPWL-AY----GHIMPFFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 6 ~~~~~il~~~~p-~~----gH~~p~l~la~~La~rGh~VT~~t~~~ 46 (336)
.++.+|+++... .. |=.+.+..++++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 345687777632 11 323568899999999999999999753
No 42
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=84.00 E-value=1.7 Score=39.45 Aligned_cols=113 Identities=7% Similarity=0.011 Sum_probs=59.6
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCC-CCCCCCCCCCCCCCC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEK--GHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPL-PQLDGLPEGAESTAE 84 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~r--Gh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~ 84 (336)
+.+|+++. ...+...=+..|.++|.++ |+++.++.+-.+.+.... .+ ..+.+ +.. .+.-. .
T Consensus 27 ~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~-------~~--~~~~i~~~~-~l~v~--~--- 90 (403)
T 3ot5_A 27 KIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQ-------VL--EIFDIKPDI-DLDIM--K--- 90 (403)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHH-------HH--HHTTCCCSE-ECCCC--C---
T ss_pred cceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHH-------HH--HhcCCCCCc-ccccC--C---
Confidence 45777776 5666677778899999987 688776654333211100 11 11221 000 11100 0
Q ss_pred CCCCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcC--CCcc-hHHHHHHcCCceEEEe
Q 019759 85 LPIHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDF--ISHW-LPPVAAQLGVNSVFFS 140 (336)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~--~~~~-~~~vA~~~~iP~v~~~ 140 (336)
...... .........+.+++++.+||+|++-. ...+ +...|++.+||++.+.
T Consensus 91 ~~~~~~----~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 91 KGQTLA----EITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp -CCCHH----HHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCHH----HHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 000111 11222345677788888999998732 3333 3467889999987554
No 43
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=80.31 E-value=2.5 Score=38.04 Aligned_cols=39 Identities=8% Similarity=0.003 Sum_probs=31.3
Q ss_pred CceEEEEEcC-C-CccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 7 QKLHIAMFPW-L-AYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 7 ~~~~il~~~~-p-~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
++.+|+++.. + ..|+-..+..+++.|+++||+|++++..
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~ 79 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIE 79 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 4567777664 3 3488899999999999999999998764
No 44
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=79.73 E-value=3.1 Score=31.27 Aligned_cols=37 Identities=5% Similarity=0.151 Sum_probs=27.2
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEeccc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSIYS 143 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~~~ 143 (336)
++++.+||+||+|..+|. +..+++++ ++|+|.++...
T Consensus 52 ~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 52 MLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 445568999999999887 56676644 47888877643
No 45
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=77.69 E-value=2.1 Score=31.73 Aligned_cols=36 Identities=19% Similarity=0.150 Sum_probs=25.5
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHH---HcCCceEEEec
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAA---QLGVNSVFFSI 141 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~---~~~iP~v~~~~ 141 (336)
+++++.+||+||+|..++. +..+++ +.++|+|+++.
T Consensus 47 ~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 47 DIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp HHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred HHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 3456678999999998887 455554 45788776543
No 46
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=76.83 E-value=2.2 Score=39.29 Aligned_cols=36 Identities=8% Similarity=-0.030 Sum_probs=28.2
Q ss_pred EEEEEcC---C---CccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 10 HIAMFPW---L---AYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 10 ~il~~~~---p---~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
+|+++.. | ..|=-.-+..|+++|+++||+|+++++.
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~ 43 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPG 43 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 6777764 2 2355577889999999999999999864
No 47
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=75.80 E-value=2.5 Score=38.91 Aligned_cols=36 Identities=6% Similarity=-0.121 Sum_probs=27.7
Q ss_pred EEEEEcC---C---CccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 10 HIAMFPW---L---AYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 10 ~il~~~~---p---~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
+|+++.. | ..|=-.-+..|+++|+++||+|+++++.
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~ 43 (485)
T 2qzs_A 2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPA 43 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred eEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 6777764 2 2244567889999999999999999864
No 48
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=73.42 E-value=11 Score=32.11 Aligned_cols=113 Identities=17% Similarity=0.149 Sum_probs=58.2
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCc
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELPIHK 89 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (336)
+|++.--=|. |.--+..|++.|.+.| +|+++.|....+-.-... +....+++..++. .+.. .+ .....+
T Consensus 2 ~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si-Tl~~pl~~~~~~~---~~~~-~~-~v~GTP--- 70 (280)
T 1l5x_A 2 KILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI-TLHKPLRMYEVDL---CGFR-AI-ATSGTP--- 70 (280)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC-CCSSCBCEEEEEC---SSSE-EE-EESSCH---
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-cCCCCeEEEEecc---CCCc-eE-EECCcH---
Confidence 4444443332 2334889999999988 899999876543322211 1123444444431 0000 00 001111
Q ss_pred hHHHHHHHHHhhHHHHHhhhhcCCcEEEEc-----------CCCcchH---HHHHHcCCceEEEecc
Q 019759 90 VPYLKKAHDLLQLPLTNFLQDSRVNWIIHD-----------FISHWLP---PVAAQLGVNSVFFSIY 142 (336)
Q Consensus 90 ~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D-----------~~~~~~~---~vA~~~~iP~v~~~~~ 142 (336)
. .| ..-.+..+ ..+||+||+- .+++..+ .-|..+|+|.|.++-.
T Consensus 71 --a---DC--V~lal~~l--~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 71 --S---DT--VYLATFGL--GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp --H---HH--HHHHHHHH--TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred --H---HH--HHHHHhcC--CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 0 01 11123333 3579999984 4444433 3466899999999763
No 49
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=73.41 E-value=13 Score=32.28 Aligned_cols=102 Identities=14% Similarity=0.124 Sum_probs=61.5
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCCCCCCe-EEEecCCCCCCCCCCCCCCCCCCC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEK--GHHVSYISTPKNIDRLPQIPTNLSSRL-SYIQLPLPQLDGLPEGAESTAELP 86 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~r--Gh~VT~~t~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~ 86 (336)
+|+++...+.|.+.-...+.+.|.++ +.+|++++.+...+.+.. .+.+ +++.++. .. . .
T Consensus 2 kILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~-----~p~i~~v~~~~~---~~---~-------~ 63 (348)
T 1psw_A 2 KILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR-----MPEVNEAIPMPL---GH---G-------A 63 (348)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT-----CTTEEEEEEC-------------------
T ss_pred eEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc-----CCccCEEEEecC---Cc---c-------c
Confidence 68888888889999999999999987 899999998644332221 1344 3333321 00 0 0
Q ss_pred CCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcc-hHHHHHHcCCce-EEE
Q 019759 87 IHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHW-LPPVAAQLGVNS-VFF 139 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~-~~~vA~~~~iP~-v~~ 139 (336)
.. +. . ...+.+.+++.+||++| |....+ ...++...++|. +.+
T Consensus 64 ~~----~~----~-~~~l~~~l~~~~~D~vi-d~~~~~~sa~~~~~~~~~~~ig~ 108 (348)
T 1psw_A 64 LE----IG----E-RRKLGHSLREKRYDRAY-VLPNSFKSALVPLFAGIPHRTGW 108 (348)
T ss_dssp -C----HH----H-HHHHHHHTTTTTCSEEE-ECSCCSGGGHHHHHTTCSEEEEE
T ss_pred cc----hH----H-HHHHHHHHHhcCCCEEE-ECCCChHHHHHHHHhCCCEEecc
Confidence 00 00 0 11233445666899988 553333 456777788987 444
No 50
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=72.46 E-value=5.8 Score=35.64 Aligned_cols=111 Identities=13% Similarity=0.117 Sum_probs=60.8
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCCCCCCCCCCeEEEecCCCCCC-CCCCCCCCCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNID-RLPQIPTNLSSRLSYIQLPLPQLD-GLPEGAESTAELP 86 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~ 86 (336)
++++++ ++.+--+.=|-.|.++|.++ ++..++.|-.+.. .+. .+.+..+.++..+ .+..+ ..
T Consensus 10 ~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~--------~~~~~~~~i~~~~~~l~~~----~~-- 73 (385)
T 4hwg_A 10 LKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELN--------QVFFDDMGIRKPDYFLEVA----AD-- 73 (385)
T ss_dssp CEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHT--------HHHHC-CCCCCCSEECCCC----CC--
T ss_pred hheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHH--------HHHHhhCCCCCCceecCCC----CC--
Confidence 345444 36677777788888888877 8877776544422 111 1111112211111 11111 01
Q ss_pred CCchHHHHHHHHHhhHHHHHhhhhcCCcEEEE--cCCCcchHHHHHHcCCceEEEe
Q 019759 87 IHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIH--DFISHWLPPVAAQLGVNSVFFS 140 (336)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~--D~~~~~~~~vA~~~~iP~v~~~ 140 (336)
.+ ..........+.+++++.+||+||+ |....++...|.+.+||++.+.
T Consensus 74 -~~----~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 74 -NT----AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp -CS----HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred -CH----HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 11 1222223456777888889998887 3344556678889999976554
No 51
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=71.17 E-value=4.2 Score=31.66 Aligned_cols=39 Identities=23% Similarity=0.192 Sum_probs=34.8
Q ss_pred CCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 6 RQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
+++.+|++.+.++-.|-.-..-++..|..+|++|.++-.
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~ 54 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGL 54 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCS
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC
Confidence 456789999999999999999999999999999998754
No 52
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=70.68 E-value=8.8 Score=27.43 Aligned_cols=37 Identities=11% Similarity=0.079 Sum_probs=25.7
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~~ 142 (336)
+.+++.+||+||.|..++. +..+.+++ ++|+|+++..
T Consensus 40 ~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 40 EKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 3445668999999997766 45555543 4788887654
No 53
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=64.63 E-value=15 Score=30.27 Aligned_cols=42 Identities=17% Similarity=0.117 Sum_probs=36.7
Q ss_pred CCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019759 6 RQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKN 47 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~ 47 (336)
+.+.+|++..-||-|=..-++.+|.+|+++|++|.++..+.+
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q 45 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVETH 45 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCT
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 346788888899999999999999999999999998877654
No 54
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=63.96 E-value=13 Score=31.27 Aligned_cols=40 Identities=15% Similarity=0.014 Sum_probs=35.7
Q ss_pred CCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 6 RQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
.++.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 3456899999999999999999999999999999988653
No 55
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=63.77 E-value=9.1 Score=31.00 Aligned_cols=39 Identities=21% Similarity=0.035 Sum_probs=34.9
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
++.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 356899999999999999999999999999999988653
No 56
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=63.59 E-value=25 Score=29.58 Aligned_cols=47 Identities=17% Similarity=0.058 Sum_probs=30.9
Q ss_pred CCCCCCCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCCC
Q 019759 1 MDLQNRQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNID 49 (336)
Q Consensus 1 ~~~~~~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~~ 49 (336)
|+.-.+++.+|++.--=|. |.--+..|++.|.+ +|+|+++.+....+
T Consensus 4 ~~~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 4 MKKTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp -------CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred hhhccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 4444456689988886554 44558889999977 89999999876543
No 57
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=61.60 E-value=16 Score=26.63 Aligned_cols=37 Identities=5% Similarity=0.014 Sum_probs=24.8
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~~ 142 (336)
+.+.+.+||+||+|..++. +..+++++ ++|+|+++..
T Consensus 42 ~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~ 87 (136)
T 3t6k_A 42 QQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQ 87 (136)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECT
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecC
Confidence 3445568999999997765 44554432 4788877654
No 58
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=61.39 E-value=11 Score=27.75 Aligned_cols=37 Identities=16% Similarity=0.031 Sum_probs=25.0
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHHc---------CCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQL---------GVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~~---------~iP~v~~~~~ 142 (336)
+.+++.+||+||.|..++. +..+.+++ .+|+|+++..
T Consensus 52 ~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 52 DAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 3445568999999997766 45555443 2677777654
No 59
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=60.23 E-value=17 Score=25.67 Aligned_cols=37 Identities=8% Similarity=0.151 Sum_probs=25.0
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHH----HcCCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAA----QLGVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~----~~~iP~v~~~~~ 142 (336)
+.+++.+||+||.|..++. +..+.+ ..++|+|+++..
T Consensus 40 ~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 40 EMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp HHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred HHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECC
Confidence 3455668999999998776 344443 345788777654
No 60
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=59.52 E-value=75 Score=28.43 Aligned_cols=34 Identities=9% Similarity=0.011 Sum_probs=21.7
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
++.+|+++.. ++.+ . -+.++..+.|++|+++...
T Consensus 4 ~~k~l~Il~~-~~~~-~---~i~~aa~~lG~~vv~v~~~ 37 (425)
T 3vot_A 4 RNKNLAIICQ-NKHL-P---FIFEEAERLGLKVTFFYNS 37 (425)
T ss_dssp CCCEEEEECC-CTTC-C---HHHHHHHHTTCEEEEEEET
T ss_pred CCcEEEEECC-ChhH-H---HHHHHHHHCCCEEEEEECC
Confidence 3447777753 3332 2 2456777889999998654
No 61
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=59.46 E-value=15 Score=27.54 Aligned_cols=37 Identities=16% Similarity=0.019 Sum_probs=33.1
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
+.+|++.+.++-.|-....-++..|..+|++|.++..
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~ 39 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGV 39 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCC
Confidence 3578999989999999999999999999999998854
No 62
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=59.18 E-value=64 Score=28.15 Aligned_cols=102 Identities=11% Similarity=0.104 Sum_probs=63.8
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCCCCCCeE-EEecCCCCCCCCCCCCCCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEK--GHHVSYISTPKNIDRLPQIPTNLSSRLS-YIQLPLPQLDGLPEGAESTAEL 85 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~r--Gh~VT~~t~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~ 85 (336)
.+|+++-..+.|.+.-...+.+.|.++ +.+||+++.+.....+... +.++ ++.++ .. +
T Consensus 9 ~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~-----p~vd~vi~~~----~~---~------- 69 (349)
T 3tov_A 9 KRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN-----PNIDELIVVD----KK---G------- 69 (349)
T ss_dssp CEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC-----TTCSEEEEEC----CS---S-------
T ss_pred CEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-----CCccEEEEeC----cc---c-------
Confidence 479999999999999999999999987 8999999986554433321 3443 44433 10 0
Q ss_pred CCCchHHHHHHHHHhhHHHHHhhhhcCC-cEEEEcCCCcchHHHHHHcCCceE
Q 019759 86 PIHKVPYLKKAHDLLQLPLTNFLQDSRV-NWIIHDFISHWLPPVAAQLGVNSV 137 (336)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~-D~vv~D~~~~~~~~vA~~~~iP~v 137 (336)
....+. ... .+.+-+++.+| |++|.=.-..-...++...++|..
T Consensus 70 ---~~~~~~----~~~-~l~~~Lr~~~y~D~vidl~~~~rs~~l~~~~~a~~r 114 (349)
T 3tov_A 70 ---RHNSIS----GLN-EVAREINAKGKTDIVINLHPNERTSYLAWKIHAPIT 114 (349)
T ss_dssp ---HHHHHH----HHH-HHHHHHHHHCCCCEEEECCCSHHHHHHHHHHCCSEE
T ss_pred ---ccccHH----HHH-HHHHHHhhCCCCeEEEECCCChHHHHHHHHhCCCeE
Confidence 000011 111 12233455689 998864443335567778888863
No 63
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=58.32 E-value=16 Score=29.66 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=31.0
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~ 46 (336)
.+|++.-.++.|-+. ...|.+.|.++|++|.++.++.
T Consensus 5 k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~ 41 (209)
T 3zqu_A 5 ERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKA 41 (209)
T ss_dssp SEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECcc
Confidence 478888878877666 8899999999999999998753
No 64
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=57.95 E-value=12 Score=30.48 Aligned_cols=40 Identities=13% Similarity=0.029 Sum_probs=35.0
Q ss_pred CCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 6 RQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
.++.+|++.+.++-.|-+...-++..|..+|++|+++-..
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 4467899999999999999999999999999999998654
No 65
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=57.11 E-value=23 Score=28.55 Aligned_cols=38 Identities=16% Similarity=-0.011 Sum_probs=30.5
Q ss_pred eEEEEEcCCCccchH-HHHHHHHHHHhCCCeEEEEeCCCC
Q 019759 9 LHIAMFPWLAYGHIM-PFFQVAMFLAEKGHHVSYISTPKN 47 (336)
Q Consensus 9 ~~il~~~~p~~gH~~-p~l~la~~La~rGh~VT~~t~~~~ 47 (336)
.+|++.-.++ +... =...+.++|.++|++|.++.++.-
T Consensus 8 k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 8 KHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp CEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 4777777776 5555 789999999999999999987543
No 66
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=56.21 E-value=18 Score=29.44 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=31.6
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNI 48 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~ 48 (336)
+.+|++...++.+-+. ...+.++|.++| +|.++.++.-.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSL 57 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHH
Confidence 4578888888877665 899999999999 99999876443
No 67
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=55.83 E-value=13 Score=30.62 Aligned_cols=42 Identities=14% Similarity=0.288 Sum_probs=29.5
Q ss_pred CCCeEEEEEeCccccCCHHHHH-----HHHHHHHhCC-CceEEEEeCCC
Q 019759 268 ENNSVVYAAFGTEMTLSQELLH-----ELAYGLEKSG-LPFIWIIKNRP 310 (336)
Q Consensus 268 ~~~~VVyvSfGS~~~~~~~~~~-----~ia~al~~~~-~~~lW~~r~~~ 310 (336)
+++.+|||+.||...+.. .+. +++++|.+.+ .+++|...+..
T Consensus 26 ~~~~~VlVtgGS~~~~n~-li~~vl~~~~l~~L~~~~~~~vv~q~G~~~ 73 (224)
T 2jzc_A 26 IEEKALFVTCGATVPFPK-LVSCVLSDEFCQELIQYGFVRLIIQFGRNY 73 (224)
T ss_dssp CCSCCEEEECCSCCSCHH-HHHHHTSHHHHHHHHTTTCCCEEECCCSSS
T ss_pred CCCCEEEEEcCCchHHHH-HHHHHHHHHHHHHHhcCCCeEEEEEECCCc
Confidence 456799999999843332 222 3348888887 78999987654
No 68
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=54.33 E-value=17 Score=27.11 Aligned_cols=28 Identities=11% Similarity=-0.096 Sum_probs=22.5
Q ss_pred CccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 18 AYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 18 ~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
+......-+.+|...+..||+|+++-+.
T Consensus 28 ~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 28 DLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp GTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 4567777888899899999999987653
No 69
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=51.96 E-value=21 Score=28.06 Aligned_cols=39 Identities=13% Similarity=0.045 Sum_probs=30.1
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNI 48 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~ 48 (336)
.||++.-.++.+=+ =...+.+.|.++|++|.++.++.-.
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~ 44 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGR 44 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGG
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHH
Confidence 37777776665444 5889999999999999999876443
No 70
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=51.68 E-value=28 Score=25.18 Aligned_cols=37 Identities=5% Similarity=0.074 Sum_probs=24.2
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~~ 142 (336)
+.+...+||+||+|...+. +..+.+.+ .+|+|+++..
T Consensus 41 ~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 41 EALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 3445567999999997764 44554432 4678777653
No 71
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=51.35 E-value=13 Score=28.06 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=25.3
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
+.|++++- .|++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 34788774 35444 78899999999999999763
No 72
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=51.09 E-value=13 Score=25.65 Aligned_cols=44 Identities=18% Similarity=0.403 Sum_probs=33.3
Q ss_pred CCHHHHHHHHHHHHhCCCceEEEEeCCCCCCCCCCccCCCChhHHHhhcCCCC
Q 019759 283 LSQELLHELAYGLEKSGLPFIWIIKNRPLVEGESGLDHLLPPGFQDRVSGTGL 335 (336)
Q Consensus 283 ~~~~~~~~ia~al~~~~~~~lW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 335 (336)
-+...+.++.+-+.++|+++..-+.+.+ ++-+ ++|++++..+|+
T Consensus 59 ndkqllkemlelisklgykvflllqdqd--------enel-eefkrkiesqgy 102 (134)
T 2lci_A 59 NDKQLLKEMLELISKLGYKVFLLLQDQD--------ENEL-EEFKRKIESQGY 102 (134)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEEECSC--------HHHH-HHHHHHHHTTTC
T ss_pred CcHHHHHHHHHHHHHhCceeEEEeecCc--------hhHH-HHHHHHHHhCCe
Confidence 4677788899999999999888887653 2223 688888888775
No 73
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=50.82 E-value=31 Score=24.32 Aligned_cols=37 Identities=16% Similarity=0.122 Sum_probs=24.2
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
+.+.+.+||+||.|...+. +..+.+++ ++|+|+++..
T Consensus 41 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (126)
T 1dbw_A 41 AFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGH 84 (126)
T ss_dssp HHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred HHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECC
Confidence 3445567999999987664 44444432 4788777654
No 74
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=50.39 E-value=28 Score=25.80 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=24.8
Q ss_pred HHhhhhcCCcEEEEcCCCcc--hHHHHHH-------cCCceEEEecc
Q 019759 105 TNFLQDSRVNWIIHDFISHW--LPPVAAQ-------LGVNSVFFSIY 142 (336)
Q Consensus 105 ~~ll~~~~~D~vv~D~~~~~--~~~vA~~-------~~iP~v~~~~~ 142 (336)
.+.+++.+||+||+|...+. +..+++. -++|+|+++..
T Consensus 44 l~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 44 VRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp HHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 33455668999999987664 4444432 35788877653
No 75
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=48.22 E-value=10 Score=35.43 Aligned_cols=37 Identities=16% Similarity=0.061 Sum_probs=28.2
Q ss_pred CCCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019759 5 NRQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 5 ~~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~ 46 (336)
.++|.||+|+-...-| +.+|+.|+++|++||++....
T Consensus 39 ~~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 4556799998755444 467899999999999998643
No 76
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=47.77 E-value=32 Score=24.65 Aligned_cols=37 Identities=14% Similarity=0.226 Sum_probs=23.9
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
+.+++.+||+||.|...+. +..+.+++ ++|+|+++..
T Consensus 43 ~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (133)
T 3b2n_A 43 KLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTF 86 (133)
T ss_dssp HHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecC
Confidence 3444557999999997664 44444432 4677777654
No 77
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=47.08 E-value=34 Score=24.54 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=24.6
Q ss_pred HhhhhcCCcEEEEcCCCc---chHHHHHH----cCCceEEEeccc
Q 019759 106 NFLQDSRVNWIIHDFISH---WLPPVAAQ----LGVNSVFFSIYS 143 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~---~~~~vA~~----~~iP~v~~~~~~ 143 (336)
+.+.+.+||+||+|...+ .+..+.+. .++|+|+++...
T Consensus 48 ~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 48 RCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp HHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 344455799999998664 24444433 368888876543
No 78
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=46.98 E-value=36 Score=23.69 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=24.7
Q ss_pred HHHhhhhcCCcEEEEcCCCcc--hHHHHHHc----CCceEEEecc
Q 019759 104 LTNFLQDSRVNWIIHDFISHW--LPPVAAQL----GVNSVFFSIY 142 (336)
Q Consensus 104 ~~~ll~~~~~D~vv~D~~~~~--~~~vA~~~----~iP~v~~~~~ 142 (336)
..+.+...+||+||.|...+. +..+++.+ .+|+|+++..
T Consensus 38 ~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 38 LREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp HHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECC
Confidence 334455567999999987654 44555433 4677776554
No 79
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=46.84 E-value=37 Score=23.55 Aligned_cols=36 Identities=6% Similarity=-0.012 Sum_probs=23.5
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+++.+||+||.|...+. +..+.+++ ++|+++++..
T Consensus 42 ~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (120)
T 1tmy_A 42 KYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAM 84 (120)
T ss_dssp HHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECT
T ss_pred HHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCC
Confidence 344457999999997764 44444432 4787777654
No 80
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=46.19 E-value=41 Score=23.84 Aligned_cols=32 Identities=6% Similarity=0.054 Sum_probs=21.9
Q ss_pred cCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEecc
Q 019759 111 SRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSIY 142 (336)
Q Consensus 111 ~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~~ 142 (336)
.++|+||.|..++. +..+++++ ++|+|+++..
T Consensus 50 ~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (129)
T 3h1g_A 50 ADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAE 90 (129)
T ss_dssp TTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCC
Confidence 36999999997765 45555432 4678777654
No 81
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=46.09 E-value=42 Score=23.77 Aligned_cols=37 Identities=14% Similarity=0.037 Sum_probs=23.7
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHH---Hc----CCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAA---QL----GVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~---~~----~iP~v~~~~~ 142 (336)
+.+.+.+||+||.|...+. +..+.+ +. ++|+|+++..
T Consensus 41 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 41 QQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp HHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 3445568999999987654 344432 22 5788877653
No 82
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=45.98 E-value=48 Score=22.75 Aligned_cols=36 Identities=14% Similarity=0.167 Sum_probs=23.2
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+...+||+||.|...+. +..+.+++ ++|+++++..
T Consensus 40 ~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 40 KFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 444557999999987654 44444332 4677777654
No 83
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=45.37 E-value=37 Score=25.02 Aligned_cols=39 Identities=21% Similarity=0.201 Sum_probs=24.8
Q ss_pred HHhhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEeccc
Q 019759 105 TNFLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIYS 143 (336)
Q Consensus 105 ~~ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~~ 143 (336)
.+.+.+.+||+||+|...+. +..+.+.+ ++|+|+++...
T Consensus 44 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 44 LEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 33445567999999987654 44444332 57888776543
No 84
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=44.92 E-value=44 Score=23.05 Aligned_cols=37 Identities=19% Similarity=0.104 Sum_probs=24.0
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHH----cCCceEEEeccc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQ----LGVNSVFFSIYS 143 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~----~~iP~v~~~~~~ 143 (336)
.+++.+||+||.|...+. +..++++ -.+|+++++...
T Consensus 40 ~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 40 QFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp HHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred HHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 344457999999987654 4444433 357888776543
No 85
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=44.86 E-value=16 Score=30.19 Aligned_cols=21 Identities=24% Similarity=0.244 Sum_probs=18.2
Q ss_pred HHHHHHHHhCCCeEEEEeCCC
Q 019759 26 FQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 26 l~la~~La~rGh~VT~~t~~~ 46 (336)
..+|++|+++|++||+++.+.
T Consensus 33 ~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 33 KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999998753
No 86
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=44.86 E-value=35 Score=25.19 Aligned_cols=38 Identities=13% Similarity=0.129 Sum_probs=24.6
Q ss_pred HHhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEecc
Q 019759 105 TNFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIY 142 (336)
Q Consensus 105 ~~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~ 142 (336)
.+.+++.+||+||+|...+. +..+.++ -++|+|+++..
T Consensus 51 ~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 95 (153)
T 3hv2_A 51 LQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGD 95 (153)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECC
Confidence 34455668999999997665 4444433 24777777654
No 87
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=44.68 E-value=38 Score=23.93 Aligned_cols=38 Identities=11% Similarity=-0.007 Sum_probs=22.4
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEeccc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIYS 143 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~~ 143 (336)
+.+++.+||+||+|...+. +..+.++ -++|+|+++...
T Consensus 45 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 45 ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 3445668999999987654 3344332 247887776543
No 88
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=44.61 E-value=40 Score=24.72 Aligned_cols=39 Identities=18% Similarity=0.123 Sum_probs=25.1
Q ss_pred HHHhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEecc
Q 019759 104 LTNFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIY 142 (336)
Q Consensus 104 ~~~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~ 142 (336)
..+.+++.+||+||+|...+. +..+++. -++|+|+++..
T Consensus 58 al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 103 (150)
T 4e7p_A 58 AIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTF 103 (150)
T ss_dssp HHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCC
Confidence 344555668999999987654 4444442 24677777654
No 89
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=44.57 E-value=28 Score=28.20 Aligned_cols=37 Identities=11% Similarity=-0.095 Sum_probs=28.3
Q ss_pred eEEEEEcCCCccchHH-HHHHHHHHHhCCCeEEEEeCCC
Q 019759 9 LHIAMFPWLAYGHIMP-FFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p-~l~la~~La~rGh~VT~~t~~~ 46 (336)
.+|++.-.++ +...- ...+.+.|.++|++|.++.++.
T Consensus 6 k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~ 43 (207)
T 3mcu_A 6 KRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYT 43 (207)
T ss_dssp CEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC-
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehH
Confidence 3677766665 44554 7899999999999999998753
No 90
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=44.21 E-value=46 Score=23.15 Aligned_cols=37 Identities=19% Similarity=0.150 Sum_probs=23.8
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH----cCCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ----LGVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~----~~iP~v~~~~~ 142 (336)
+.+.+.+||+||.|...+. +..++++ -++|+++++..
T Consensus 41 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 41 QILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp HHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESC
T ss_pred HHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECC
Confidence 3445568999999987654 4444443 35777776654
No 91
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=44.11 E-value=37 Score=23.75 Aligned_cols=36 Identities=8% Similarity=0.229 Sum_probs=23.2
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+++.+||+||.|...+. +..+++++ ++|+|+++..
T Consensus 42 ~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (124)
T 1srr_A 42 IVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAY 84 (124)
T ss_dssp HHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESS
T ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEcc
Confidence 334457999999987654 44444432 4777777654
No 92
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=44.02 E-value=24 Score=29.63 Aligned_cols=40 Identities=18% Similarity=0.449 Sum_probs=32.3
Q ss_pred CCeEEEEEeCccccCCHHHHHHHHHHHHhC--CCceEEEEeC
Q 019759 269 NNSVVYAAFGTEMTLSQELLHELAYGLEKS--GLPFIWIIKN 308 (336)
Q Consensus 269 ~~~VVyvSfGS~~~~~~~~~~~ia~al~~~--~~~~lW~~r~ 308 (336)
+.++++|+|||...-..+.+..+++.+++. +.+|-|.+..
T Consensus 9 ~~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 9 KTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp CEEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred CceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 468999999998876667888898888764 4688898764
No 93
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=44.01 E-value=27 Score=26.97 Aligned_cols=38 Identities=8% Similarity=0.051 Sum_probs=25.0
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEeccc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIYS 143 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~~ 143 (336)
+.+++.+||+||+|..++. +..++++ -++|+|+++...
T Consensus 45 ~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 45 KLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3455668999999997765 4444432 247887776543
No 94
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=43.88 E-value=37 Score=24.48 Aligned_cols=37 Identities=14% Similarity=0.265 Sum_probs=23.4
Q ss_pred HHhhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 105 TNFLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 105 ~~ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+.+++.+||+||+|. .+. +..+.+.+ ++|+|+++..
T Consensus 41 ~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~ 84 (142)
T 2qxy_A 41 FTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAY 84 (142)
T ss_dssp HHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECC
Confidence 3445556899999999 665 23333322 4788877654
No 95
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=43.71 E-value=38 Score=23.84 Aligned_cols=38 Identities=11% Similarity=-0.141 Sum_probs=23.7
Q ss_pred HHHhhhhcCCcEEEEcCCCcc--hHHHHHH-------cCCceEEEec
Q 019759 104 LTNFLQDSRVNWIIHDFISHW--LPPVAAQ-------LGVNSVFFSI 141 (336)
Q Consensus 104 ~~~ll~~~~~D~vv~D~~~~~--~~~vA~~-------~~iP~v~~~~ 141 (336)
..+.+++.+||+||+|...+. +..++++ .++|+|+++.
T Consensus 39 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 85 (127)
T 3i42_A 39 ALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSG 85 (127)
T ss_dssp HHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEEC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEEC
Confidence 334455668999999987654 4444432 2367776654
No 96
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=43.17 E-value=37 Score=23.70 Aligned_cols=35 Identities=14% Similarity=0.083 Sum_probs=22.1
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEec
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSI 141 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~ 141 (336)
.+++.+||+||.|...+. +..+++++ .+|+++++.
T Consensus 40 ~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 83 (124)
T 1mb3_A 40 IARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTA 83 (124)
T ss_dssp HHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC-
T ss_pred HHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEEC
Confidence 344557999999997664 44444432 467777654
No 97
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=42.24 E-value=38 Score=24.40 Aligned_cols=37 Identities=8% Similarity=0.078 Sum_probs=24.2
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHHc----CCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQL----GVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~~----~iP~v~~~~~ 142 (336)
+.+...+||+||.|...+. +..+++++ .+|+|+++..
T Consensus 42 ~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~ 84 (136)
T 2qzj_A 42 GKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYI 84 (136)
T ss_dssp HHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcC
Confidence 3444557999999987654 44554433 5788777654
No 98
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=41.77 E-value=42 Score=24.31 Aligned_cols=35 Identities=11% Similarity=0.075 Sum_probs=22.4
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEec
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSI 141 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~ 141 (336)
.+++.+||+||.|...+. +..+++++ ++|+|+++.
T Consensus 44 ~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 44 IALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp HHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred HHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 444557999999987654 44554432 467776654
No 99
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=41.49 E-value=57 Score=22.47 Aligned_cols=37 Identities=8% Similarity=0.019 Sum_probs=23.8
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~ 142 (336)
+.+.+.+||++|.|...+. +..+.++ ..+|+|+++..
T Consensus 38 ~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (121)
T 2pl1_A 38 YYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTAR 81 (121)
T ss_dssp HHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESC
T ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecC
Confidence 3445567999999987654 4444432 24778777654
No 100
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=41.16 E-value=20 Score=32.15 Aligned_cols=36 Identities=11% Similarity=0.100 Sum_probs=24.4
Q ss_pred ceEEEEEc---CCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 8 KLHIAMFP---WLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 8 ~~~il~~~---~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
+.+|++++ +| .+.-.....+++.|+++| +|++++..
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 46788887 34 222223456788999999 99999643
No 101
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=40.70 E-value=35 Score=27.57 Aligned_cols=41 Identities=15% Similarity=0.134 Sum_probs=29.7
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHh-CCCeEEEEeCCCCCC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAE-KGHHVSYISTPKNID 49 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~-rGh~VT~~t~~~~~~ 49 (336)
+.+|++...++.+ ..-...+.++|.+ +|++|.++.++.-.+
T Consensus 19 ~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~ 60 (206)
T 1qzu_A 19 KFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKH 60 (206)
T ss_dssp SEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGG
T ss_pred CCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHH
Confidence 4578887777755 4456899999999 899999998865433
No 102
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=40.70 E-value=44 Score=23.50 Aligned_cols=37 Identities=8% Similarity=0.077 Sum_probs=23.0
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~~ 142 (336)
+.++..+||+||.|...+. +..+.+++ ++|+|+++..
T Consensus 45 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 45 KIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 3445557999999987664 45555543 3456665443
No 103
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=40.61 E-value=44 Score=23.89 Aligned_cols=38 Identities=13% Similarity=0.110 Sum_probs=24.2
Q ss_pred HhhhhcCCcEEEEcCCCc-------chHHHHHH-----cCCceEEEeccc
Q 019759 106 NFLQDSRVNWIIHDFISH-------WLPPVAAQ-----LGVNSVFFSIYS 143 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~-------~~~~vA~~-----~~iP~v~~~~~~ 143 (336)
+.+++.+||+||.|...+ .+..+.++ -++|+|+++...
T Consensus 41 ~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 41 TVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp HHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred HHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 344556799999998765 24444332 257888876543
No 104
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=40.42 E-value=41 Score=26.97 Aligned_cols=36 Identities=11% Similarity=-0.085 Sum_probs=29.1
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhC-CCeEEEEeCCC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEK-GHHVSYISTPK 46 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~r-Gh~VT~~t~~~ 46 (336)
+|++.-.++.|-+. ...+.+.|.++ |++|.++.++.
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~ 38 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKW 38 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECch
Confidence 67777777766655 89999999999 99999998753
No 105
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=40.40 E-value=55 Score=23.59 Aligned_cols=38 Identities=16% Similarity=-0.011 Sum_probs=24.4
Q ss_pred HHhhhhcCCcEEEEcCCCcc--hHHHHHH-------cCCceEEEecc
Q 019759 105 TNFLQDSRVNWIIHDFISHW--LPPVAAQ-------LGVNSVFFSIY 142 (336)
Q Consensus 105 ~~ll~~~~~D~vv~D~~~~~--~~~vA~~-------~~iP~v~~~~~ 142 (336)
.+.+++.+||+||+|...+. +..+.+. -++|+|+++..
T Consensus 44 ~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 44 LYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp HHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred HHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
Confidence 33445568999999997665 3444432 24677777654
No 106
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=40.17 E-value=47 Score=23.88 Aligned_cols=36 Identities=17% Similarity=0.110 Sum_probs=22.8
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+...+||+||.|...+. +..+++.+ .+|+|+++..
T Consensus 43 ~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~ 85 (137)
T 3cfy_A 43 FIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAH 85 (137)
T ss_dssp HHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEec
Confidence 344457999999987664 44444432 4677776554
No 107
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=39.94 E-value=37 Score=24.38 Aligned_cols=38 Identities=8% Similarity=-0.123 Sum_probs=24.5
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH-------cCCceEEEeccc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ-------LGVNSVFFSIYS 143 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~-------~~iP~v~~~~~~ 143 (336)
+.+++.+||+||+|...+. +..+.++ .++|+|+++...
T Consensus 44 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 44 EQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp HHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 3445568999999987665 4444432 246777776543
No 108
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=39.79 E-value=53 Score=23.31 Aligned_cols=37 Identities=8% Similarity=0.091 Sum_probs=23.4
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~ 142 (336)
+.+....||+||.|...+. +..+.++ -++|+|+++..
T Consensus 41 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (132)
T 3crn_A 41 AKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGY 84 (132)
T ss_dssp HHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESC
T ss_pred HHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEecc
Confidence 3444557999999987654 4444432 24677777654
No 109
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=39.72 E-value=58 Score=22.90 Aligned_cols=38 Identities=16% Similarity=0.078 Sum_probs=23.9
Q ss_pred HHhhhhc-CCcEEEEcCCCcc---hHHHHHHc-----CCceEEEecc
Q 019759 105 TNFLQDS-RVNWIIHDFISHW---LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 105 ~~ll~~~-~~D~vv~D~~~~~---~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+.+.+. +||+||.|...+. +..+.+++ ++|+|+++..
T Consensus 42 ~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 42 IEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp HHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESS
T ss_pred HHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 3344555 7999999986653 44444332 4788877654
No 110
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=39.43 E-value=30 Score=25.19 Aligned_cols=40 Identities=8% Similarity=0.061 Sum_probs=25.3
Q ss_pred HHHHhhhh-cCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 103 PLTNFLQD-SRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 103 ~~~~ll~~-~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+..+.+. .+||+||+|..++. +..+.+++ ++|+|+++..
T Consensus 57 ~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 104 (146)
T 4dad_A 57 QIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTD 104 (146)
T ss_dssp HHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCC
Confidence 34444444 68999999998766 33444322 4787777654
No 111
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=39.00 E-value=47 Score=24.34 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=24.2
Q ss_pred HHHhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEecc
Q 019759 104 LTNFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIY 142 (336)
Q Consensus 104 ~~~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~ 142 (336)
..+.+++.+||+||+|...+. +..+.+. -++|+|+++..
T Consensus 53 a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 98 (152)
T 3eul_A 53 ALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAH 98 (152)
T ss_dssp HHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEcc
Confidence 334455568999999987654 3444432 24677776654
No 112
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=38.84 E-value=58 Score=22.93 Aligned_cols=25 Identities=12% Similarity=-0.193 Sum_probs=17.1
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHH
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAA 130 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~ 130 (336)
+.+++.+||+||+|...+. +..+.+
T Consensus 44 ~~l~~~~~dlii~d~~l~~~~g~~~~~ 70 (132)
T 3lte_A 44 IKLSTFEPAIMTLDLSMPKLDGLDVIR 70 (132)
T ss_dssp HHHHHTCCSEEEEESCBTTBCHHHHHH
T ss_pred HHHHhcCCCEEEEecCCCCCCHHHHHH
Confidence 3445568999999997665 445544
No 113
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=38.12 E-value=37 Score=24.48 Aligned_cols=37 Identities=11% Similarity=0.069 Sum_probs=21.5
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHH----H---cCCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAA----Q---LGVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~----~---~~iP~v~~~~~ 142 (336)
+.+++.+||+||+|...+. +..+.+ . -++|+|+++..
T Consensus 40 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 40 EQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred HHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 3445558999999987654 222322 2 35788777654
No 114
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=38.11 E-value=67 Score=22.87 Aligned_cols=32 Identities=13% Similarity=-0.009 Sum_probs=21.3
Q ss_pred cCCcEEEEcCCCcc--hHHHHHHc------CCceEEEecc
Q 019759 111 SRVNWIIHDFISHW--LPPVAAQL------GVNSVFFSIY 142 (336)
Q Consensus 111 ~~~D~vv~D~~~~~--~~~vA~~~------~iP~v~~~~~ 142 (336)
.+||+||.|..++. +..+++.+ .+|+|+++..
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~ 90 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAF 90 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECC
Confidence 47999999997765 44444322 4677777654
No 115
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=37.45 E-value=65 Score=22.50 Aligned_cols=36 Identities=11% Similarity=0.089 Sum_probs=23.2
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~~ 142 (336)
.+...+||+||.|...+. +..+.+++ .+|+++++..
T Consensus 44 ~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 44 KLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 444557999999997664 44554432 3577776553
No 116
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=37.25 E-value=68 Score=23.42 Aligned_cols=37 Identities=5% Similarity=0.095 Sum_probs=23.5
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~ 142 (336)
+.+++.+||+||+|...+. +..+.+. -++|+|+++..
T Consensus 45 ~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 88 (153)
T 3cz5_A 45 RLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMH 88 (153)
T ss_dssp HHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECC
Confidence 3445567999999986653 3444332 24788877654
No 117
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=36.61 E-value=20 Score=28.97 Aligned_cols=17 Identities=29% Similarity=0.464 Sum_probs=15.7
Q ss_pred HHHHHHHHhCCCeEEEE
Q 019759 26 FQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 26 l~la~~La~rGh~VT~~ 42 (336)
+.+|..|+++|++|+++
T Consensus 15 L~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLF 31 (336)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 67899999999999998
No 118
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=36.52 E-value=61 Score=23.13 Aligned_cols=37 Identities=5% Similarity=-0.039 Sum_probs=24.6
Q ss_pred HHHhhhh-cCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEe
Q 019759 104 LTNFLQD-SRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFS 140 (336)
Q Consensus 104 ~~~ll~~-~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~ 140 (336)
..+.+++ .+||+||.|...+. +..+.+++ ++|+|+++
T Consensus 51 al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 51 FFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp HHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 3445566 68999999987664 45555544 36777765
No 119
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=36.50 E-value=36 Score=29.52 Aligned_cols=31 Identities=23% Similarity=0.062 Sum_probs=25.9
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEe
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t 43 (336)
.||.|+-..+.| |-.+|+.|+++||+|+..=
T Consensus 5 ~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 5 KHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCD 35 (326)
T ss_dssp CEEEEESCCSHH----HHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEEEECHHH----HHHHHHHHHhCCCEEEEEc
Confidence 478888887777 5579999999999999873
No 120
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=36.46 E-value=50 Score=23.71 Aligned_cols=37 Identities=16% Similarity=0.109 Sum_probs=23.2
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
+.+...+||+||+|..++. +..+.+.+ ++|+|+++..
T Consensus 38 ~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (139)
T 2jk1_A 38 AILEEEWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGY 81 (139)
T ss_dssp HHHHHSCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESC
T ss_pred HHHhcCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCC
Confidence 3444557999999997664 44444332 3677766543
No 121
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=36.42 E-value=26 Score=30.95 Aligned_cols=29 Identities=21% Similarity=0.173 Sum_probs=22.6
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEE
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~ 42 (336)
+||+|+-..--| +.+|..|+++|++||++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 577777544334 67889999999999998
No 122
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=36.37 E-value=36 Score=26.87 Aligned_cols=38 Identities=8% Similarity=0.116 Sum_probs=29.0
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNI 48 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~ 48 (336)
||++.-.++.+ ..=...+.++|.++|++|.++.++.-.
T Consensus 4 ~IllgvTGs~a-a~k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 4 KLLICATASIN-VININHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CEEEEECSCGG-GGGHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred EEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEEchhHH
Confidence 56666666644 446789999999999999999876433
No 123
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=36.30 E-value=23 Score=30.00 Aligned_cols=26 Identities=27% Similarity=0.406 Sum_probs=19.6
Q ss_pred CCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 17 LAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 17 p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
++.|.+= ..|+++|.++||+|+.++-
T Consensus 7 GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 7 GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 4445443 4688999999999999874
No 124
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=36.25 E-value=52 Score=24.16 Aligned_cols=38 Identities=8% Similarity=-0.087 Sum_probs=24.3
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEeccc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIYS 143 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~~ 143 (336)
+.+.+.+||+||+|...+. +..+.+. -++|+|+++...
T Consensus 41 ~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 41 AGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp HTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3444557999999986654 4444432 257888876543
No 125
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=36.23 E-value=45 Score=26.10 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=23.7
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+...+||+||.|..++. +..+++.+ ++|+|+++..
T Consensus 43 ~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 85 (208)
T 1yio_A 43 HRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAH 85 (208)
T ss_dssp HCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESC
T ss_pred hhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 344557999999997764 44544432 4788877653
No 126
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=36.20 E-value=40 Score=26.95 Aligned_cols=37 Identities=3% Similarity=-0.040 Sum_probs=29.0
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~ 46 (336)
.+|++...++.+=+ =...+.+.|.++|++|.++.++.
T Consensus 9 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~ 45 (194)
T 1p3y_1 9 KKLLIGICGSISSV-GISSYLLYFKSFFKEIRVVMTKT 45 (194)
T ss_dssp CEEEEEECSCGGGG-GTHHHHHHHTTTSSEEEEEECHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchh
Confidence 47777776665544 47899999999999999998753
No 127
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=36.10 E-value=58 Score=25.65 Aligned_cols=34 Identities=15% Similarity=0.037 Sum_probs=25.8
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEe
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t 43 (336)
.++++-....|+-..+..+++.|+++|+.|..+-
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d 66 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPE 66 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEec
Confidence 4444444566777889999999999999877664
No 128
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=36.00 E-value=40 Score=25.28 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=24.7
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
...+|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 18 ~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 3457888854 4333 55788999999999998753
No 129
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=35.55 E-value=38 Score=24.26 Aligned_cols=37 Identities=11% Similarity=-0.009 Sum_probs=22.5
Q ss_pred HHhhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEec
Q 019759 105 TNFLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSI 141 (336)
Q Consensus 105 ~~ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~ 141 (336)
.+.+++.+||+||+|...+. +..+.+++ ++|+|+++.
T Consensus 44 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 87 (137)
T 3hdg_A 44 ERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISA 87 (137)
T ss_dssp HHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCC
T ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEec
Confidence 33445568999999987665 44444322 356666554
No 130
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=35.52 E-value=62 Score=25.59 Aligned_cols=39 Identities=8% Similarity=0.056 Sum_probs=25.4
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEeccch
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIYSA 144 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~~~ 144 (336)
+.+...+||+||.|...+. +..+++. -++|+|+++....
T Consensus 40 ~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~ 85 (225)
T 1kgs_A 40 YMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSD 85 (225)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCH
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 3445568999999997664 4444432 2578888776543
No 131
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=35.31 E-value=48 Score=25.25 Aligned_cols=38 Identities=18% Similarity=0.086 Sum_probs=25.8
Q ss_pred eEEEEE-cCCCc-cchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019759 9 LHIAMF-PWLAY-GHIMPFFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 9 ~~il~~-~~p~~-gH~~p~l~la~~La~rGh~VT~~t~~~ 46 (336)
.+++++ --|.. ...--.+=++..|.++||+||+..++.
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npA 46 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPA 46 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHH
Confidence 444333 33444 334447888999999999999998753
No 132
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=35.26 E-value=1.6e+02 Score=23.97 Aligned_cols=109 Identities=9% Similarity=0.018 Sum_probs=60.4
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEK--GHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAE 84 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~r--Gh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (336)
+..+|+|+.+.. |+ .+..+.+.|.+. +++|..+.+.......... ....+|.+..++. ..+. +
T Consensus 21 ~~~rI~~l~SG~-g~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~--A~~~gIp~~~~~~---~~~~-------~ 85 (229)
T 3auf_A 21 HMIRIGVLISGS-GT--NLQAILDGCREGRIPGRVAVVISDRADAYGLER--ARRAGVDALHMDP---AAYP-------S 85 (229)
T ss_dssp TCEEEEEEESSC-CH--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHH--HHHTTCEEEECCG---GGSS-------S
T ss_pred CCcEEEEEEeCC-cH--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHH--HHHcCCCEEEECc---cccc-------c
Confidence 346888887555 33 366777778776 6788766554322211110 0013666665431 1110 0
Q ss_pred CCCCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcc-hHHHHHHcCCceEEEecc
Q 019759 85 LPIHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHW-LPPVAAQLGVNSVFFSIY 142 (336)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~-~~~vA~~~~iP~v~~~~~ 142 (336)
. ....+.+.+.+++.++|++|+=.|..- ...+-..+...++-+-++
T Consensus 86 ---------r---~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 86 ---------R---TAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ---------H---HHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ---------h---hhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 112244566777789999999876544 345666666677777665
No 133
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=35.20 E-value=21 Score=30.99 Aligned_cols=21 Identities=14% Similarity=0.134 Sum_probs=18.3
Q ss_pred HHHHHHHHhCCCeEEEEeCCC
Q 019759 26 FQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 26 l~la~~La~rGh~VT~~t~~~ 46 (336)
.++|+++++||++||+++.+.
T Consensus 69 ~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 69 ATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHCCCEEEEEecCC
Confidence 478999999999999998754
No 134
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=35.14 E-value=66 Score=23.05 Aligned_cols=33 Identities=6% Similarity=0.036 Sum_probs=21.6
Q ss_pred hcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 110 DSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 110 ~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
..+||+||+|...+. +..+.+++ ++|+|+++..
T Consensus 47 ~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (143)
T 3jte_A 47 CNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGH 86 (143)
T ss_dssp TTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECT
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECC
Confidence 457999999987654 44444322 4777777654
No 135
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=35.07 E-value=93 Score=22.12 Aligned_cols=38 Identities=13% Similarity=-0.079 Sum_probs=29.9
Q ss_pred CCceEEEEEcCCCccchHH-HHHHHHHHHhCCCeEEEEe
Q 019759 6 RQKLHIAMFPWLAYGHIMP-FFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p-~l~la~~La~rGh~VT~~t 43 (336)
.+..+|++++..|.|.-.- ...+-+.+.++|.++.+-+
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 4456899999999999874 6777788888999865544
No 136
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=34.90 E-value=35 Score=30.15 Aligned_cols=37 Identities=8% Similarity=-0.030 Sum_probs=27.4
Q ss_pred EEEEEc--CCC-ccchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019759 10 HIAMFP--WLA-YGHIMPFFQVAMFLAEKGHHVSYISTPKN 47 (336)
Q Consensus 10 ~il~~~--~p~-~gH~~p~l~la~~La~rGh~VT~~t~~~~ 47 (336)
+|+++. +|. .|.-.-...|+++|+++ |+|++++....
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~ 41 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAF 41 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCC
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCC
Confidence 566664 233 36667789999999999 99999986433
No 137
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=34.88 E-value=58 Score=25.83 Aligned_cols=36 Identities=22% Similarity=0.126 Sum_probs=29.8
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~ 46 (336)
||++.-.++.|-+ =...+.++|.++|++|.++.++.
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChh
Confidence 6888888887755 57889999999999999998753
No 138
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=34.73 E-value=74 Score=22.75 Aligned_cols=24 Identities=17% Similarity=0.045 Sum_probs=16.4
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHH
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAA 130 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~ 130 (336)
.+.+.+||+||.|...+. +..+++
T Consensus 49 ~l~~~~~dlvllD~~lp~~~g~~~~~ 74 (140)
T 3c97_A 49 AYQNRQFDVIIMDIQMPVMDGLEAVS 74 (140)
T ss_dssp HHHHSCCSEEEECTTCCSSCHHHHHH
T ss_pred HHhcCCCCEEEEeCCCCCCcHHHHHH
Confidence 344557999999997664 444444
No 139
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=34.69 E-value=57 Score=26.55 Aligned_cols=39 Identities=13% Similarity=0.111 Sum_probs=25.5
Q ss_pred HHhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEeccc
Q 019759 105 TNFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIYS 143 (336)
Q Consensus 105 ~~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~~ 143 (336)
.+.+...+||+||.|..++. +..++++ -++|+|+++...
T Consensus 60 l~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 60 LDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp HHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 33445568999999997765 4455443 247888776543
No 140
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=34.65 E-value=67 Score=21.69 Aligned_cols=37 Identities=11% Similarity=-0.149 Sum_probs=22.9
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH-------cCCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ-------LGVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~-------~~iP~v~~~~~ 142 (336)
+.+++.+||+||.|...+. +..+.+. -++|+|+++..
T Consensus 39 ~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 39 DQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp HHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred HHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 3444557999999986553 3333332 35788877653
No 141
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=34.46 E-value=61 Score=23.96 Aligned_cols=38 Identities=3% Similarity=0.003 Sum_probs=24.0
Q ss_pred HHhhhhc--CCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 105 TNFLQDS--RVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 105 ~~ll~~~--~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+.+++. +||+||+|...+. +..+.+++ ++|+|+++..
T Consensus 74 l~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 74 VIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp HHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEecc
Confidence 3444455 7899999987654 44444332 4787777654
No 142
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=34.00 E-value=59 Score=26.57 Aligned_cols=37 Identities=8% Similarity=-0.032 Sum_probs=24.4
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH----cCCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ----LGVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~----~~iP~v~~~~~ 142 (336)
+.+...+||+||.|..++. +..++++ -++|+|+++..
T Consensus 75 ~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~ 117 (249)
T 3q9s_A 75 IKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTAR 117 (249)
T ss_dssp HHHHHSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHHhcCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECC
Confidence 3445568999999998776 3444443 24777777654
No 143
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=33.92 E-value=57 Score=25.66 Aligned_cols=36 Identities=17% Similarity=0.085 Sum_probs=23.4
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+.+.+||+||.|..++. +..+++++ .+|+++++..
T Consensus 46 ~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~ 88 (215)
T 1a04_A 46 LAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVS 88 (215)
T ss_dssp HHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECC
T ss_pred HHHhcCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECC
Confidence 344557999999997765 44554432 4677776654
No 144
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=33.24 E-value=48 Score=26.20 Aligned_cols=31 Identities=10% Similarity=-0.076 Sum_probs=21.9
Q ss_pred CCcEEEEcCCCcc--hHHHHHH---------cCCceEEEecc
Q 019759 112 RVNWIIHDFISHW--LPPVAAQ---------LGVNSVFFSIY 142 (336)
Q Consensus 112 ~~D~vv~D~~~~~--~~~vA~~---------~~iP~v~~~~~ 142 (336)
+||+||+|..++. +..++++ .++|+|+++..
T Consensus 119 ~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~ 160 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGH 160 (206)
T ss_dssp SCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESS
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECC
Confidence 7999999997765 4444432 35788888764
No 145
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=33.16 E-value=71 Score=25.38 Aligned_cols=36 Identities=17% Similarity=0.026 Sum_probs=23.6
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~ 142 (336)
.+...+||+||.|...+. +..+++. -++|+|+++..
T Consensus 46 ~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (233)
T 1ys7_A 46 SATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR 88 (233)
T ss_dssp HHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECC
T ss_pred HHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcC
Confidence 444568999999997764 4444432 25788777653
No 146
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=33.12 E-value=88 Score=22.35 Aligned_cols=32 Identities=16% Similarity=-0.038 Sum_probs=21.3
Q ss_pred cCCcEEEEcCCCcc---hHHHHH----HcCCceEEEecc
Q 019759 111 SRVNWIIHDFISHW---LPPVAA----QLGVNSVFFSIY 142 (336)
Q Consensus 111 ~~~D~vv~D~~~~~---~~~vA~----~~~iP~v~~~~~ 142 (336)
.+||+||+|...+. +..+++ .-++|+|+++..
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~ 87 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAH 87 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESS
T ss_pred CCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECC
Confidence 57999999987642 444443 245787777653
No 147
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=32.87 E-value=61 Score=22.26 Aligned_cols=34 Identities=18% Similarity=0.049 Sum_probs=22.1
Q ss_pred hhcCCcEEEEcCCCcc--hHHHHHHc----CCceEEEecc
Q 019759 109 QDSRVNWIIHDFISHW--LPPVAAQL----GVNSVFFSIY 142 (336)
Q Consensus 109 ~~~~~D~vv~D~~~~~--~~~vA~~~----~iP~v~~~~~ 142 (336)
...+||+||.|...+. +..+++++ .+|+++++..
T Consensus 42 ~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 81 (121)
T 1zh2_A 42 ATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSAR 81 (121)
T ss_dssp HHHCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred hcCCCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECC
Confidence 3447999999987654 44554433 4677777654
No 148
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=32.82 E-value=36 Score=26.24 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=22.6
Q ss_pred EEEEEeCccccCCHHHHHHHHHHHHhCC
Q 019759 272 VVYAAFGTEMTLSQELLHELAYGLEKSG 299 (336)
Q Consensus 272 VVyvSfGS~~~~~~~~~~~ia~al~~~~ 299 (336)
.+|+|+||+..-+.+.++.-.+.|++.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999998767777877778888764
No 149
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A*
Probab=32.78 E-value=50 Score=32.15 Aligned_cols=45 Identities=11% Similarity=0.039 Sum_probs=33.8
Q ss_pred CCCCCceEEEEEcCCCc---cchHHHHH-HHHHHHh-CCCeEEEEeCCCC
Q 019759 3 LQNRQKLHIAMFPWLAY---GHIMPFFQ-VAMFLAE-KGHHVSYISTPKN 47 (336)
Q Consensus 3 ~~~~~~~~il~~~~p~~---gH~~p~l~-la~~La~-rGh~VT~~t~~~~ 47 (336)
.++.+.+|++..|..+. ||..|++. +.+.+-. -||+|+++.++..
T Consensus 377 ~~~~~~l~~~~~ps~g~lHLGh~v~~~k~l~~~~~~~~g~~v~ilIaD~~ 426 (690)
T 3p0j_A 377 AAPAKPHACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEGTVTLVLPDWS 426 (690)
T ss_dssp CCCSSCEEEEECCCCSSCBHHHHHHHHHHHHHHHHHCSSCEEEEEECTTH
T ss_pred CCCCCcceEEecCCCCCcccchHHHHHHHHHHHHHHcCCCeEEEEEecch
Confidence 35566788999997666 89999888 5554443 3999999998754
No 150
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=32.77 E-value=79 Score=22.33 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=22.1
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEec
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSI 141 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~ 141 (336)
.+...+||+||.|...+. +..+.++ ..+|+|+++.
T Consensus 42 ~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 83 (136)
T 1mvo_A 42 KAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTA 83 (136)
T ss_dssp HHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred HHhhcCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEEC
Confidence 344557999999987654 4444432 2467777654
No 151
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=32.62 E-value=31 Score=24.85 Aligned_cols=36 Identities=6% Similarity=-0.121 Sum_probs=23.2
Q ss_pred hhhcCCcEEEEcCCCcc----hHHHHHH-----cCCceEEEeccc
Q 019759 108 LQDSRVNWIIHDFISHW----LPPVAAQ-----LGVNSVFFSIYS 143 (336)
Q Consensus 108 l~~~~~D~vv~D~~~~~----~~~vA~~-----~~iP~v~~~~~~ 143 (336)
+++.+||+||+|...+. +..+.++ -++|+|+++...
T Consensus 46 l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 90 (136)
T 3kto_A 46 QISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSS 90 (136)
T ss_dssp CCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred HhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCC
Confidence 34457999999997665 3344432 257888776543
No 152
>2llz_A Uncharacterized protein YJDK; RNAse, biofilm, unknown function; NMR {Escherichia coli}
Probab=32.59 E-value=27 Score=24.41 Aligned_cols=23 Identities=13% Similarity=0.108 Sum_probs=20.1
Q ss_pred EeCccccCCHHHHHHHHHHHHhC
Q 019759 276 AFGTEMTLSQELLHELAYGLEKS 298 (336)
Q Consensus 276 SfGS~~~~~~~~~~~ia~al~~~ 298 (336)
|||=++.++++++++++.+|.+.
T Consensus 56 sFgliS~l~~~ev~~La~~L~e~ 78 (100)
T 2llz_A 56 SFAITTSLAASEIEDLIRLKCLD 78 (100)
T ss_dssp EEEECCCSCHHHHHHHHHHGGGT
T ss_pred ceeeeccCCHHHHHHHHHHHHHh
Confidence 67777899999999999999865
No 153
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=32.53 E-value=86 Score=22.75 Aligned_cols=32 Identities=22% Similarity=0.174 Sum_probs=21.5
Q ss_pred cCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEecc
Q 019759 111 SRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSIY 142 (336)
Q Consensus 111 ~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~~ 142 (336)
.+||+||.|..++. +..+++++ ++|+|+++..
T Consensus 60 ~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~ 100 (149)
T 1i3c_A 60 PRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTS 100 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECC
Confidence 46999999997764 44444322 4688877654
No 154
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=32.42 E-value=40 Score=26.00 Aligned_cols=28 Identities=18% Similarity=0.304 Sum_probs=23.7
Q ss_pred EEEEEeCccccCCHHHHHHHHHHHHhCC
Q 019759 272 VVYAAFGTEMTLSQELLHELAYGLEKSG 299 (336)
Q Consensus 272 VVyvSfGS~~~~~~~~~~~ia~al~~~~ 299 (336)
.+|+++||+..-+.+.++.-.+.|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 4899999999778888888888888764
No 155
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=32.29 E-value=28 Score=29.22 Aligned_cols=37 Identities=16% Similarity=0.176 Sum_probs=28.4
Q ss_pred CeEEEEEeCccccCCHH-HHHHHHHHHHhC--CCceEEEE
Q 019759 270 NSVVYAAFGTEMTLSQE-LLHELAYGLEKS--GLPFIWII 306 (336)
Q Consensus 270 ~~VVyvSfGS~~~~~~~-~~~~ia~al~~~--~~~~lW~~ 306 (336)
.++++|+|||...-..+ .++.+++.+++. +.+|-|.+
T Consensus 3 ~aillv~hGSr~~~~~~~~~~~~~~~v~~~~p~~~V~~af 42 (264)
T 2xwp_A 3 KALLVVSFGTSYHDTCEKNIVACERDLAASCPDRDLFRAF 42 (264)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCeEEeeh
Confidence 47999999997755556 777888888754 56788887
No 156
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=31.99 E-value=86 Score=22.40 Aligned_cols=27 Identities=26% Similarity=0.240 Sum_probs=18.3
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHHc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQL 132 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~~ 132 (336)
+.+++.+||+||+|...+. +..+++.+
T Consensus 49 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~l 77 (143)
T 2qv0_A 49 KFLQHNKVDAIFLDINIPSLDGVLLAQNI 77 (143)
T ss_dssp HHHHHCCCSEEEECSSCSSSCHHHHHHHH
T ss_pred HHHHhCCCCEEEEecCCCCCCHHHHHHHH
Confidence 3445567999999987654 45565544
No 157
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=31.91 E-value=2.1e+02 Score=23.45 Aligned_cols=30 Identities=3% Similarity=-0.278 Sum_probs=22.7
Q ss_pred cCCcEEEEcCCCcchHH-HHHHcCCceEEEe
Q 019759 111 SRVNWIIHDFISHWLPP-VAAQLGVNSVFFS 140 (336)
Q Consensus 111 ~~~D~vv~D~~~~~~~~-vA~~~~iP~v~~~ 140 (336)
.++|+||+-++...+.+ +-+.+++|++.+.
T Consensus 68 ~g~d~iviaCnt~~~l~~lr~~~~iPvigi~ 98 (245)
T 3qvl_A 68 QGVDGHVIASFGDPGLLAARELAQGPVIGIA 98 (245)
T ss_dssp HTCSEEEEC-CCCTTHHHHHHHCSSCEEEHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHcCCCEECcc
Confidence 47999999998777664 5567899998764
No 158
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=31.79 E-value=71 Score=26.97 Aligned_cols=36 Identities=8% Similarity=0.136 Sum_probs=24.4
Q ss_pred hhhhcCCcEEEEcCCCc-c--hHHHH----HHcCCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISH-W--LPPVA----AQLGVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~-~--~~~vA----~~~~iP~v~~~~~ 142 (336)
.+.+.+||+||+|..++ . +..++ ...++|+|+++..
T Consensus 200 ~~~~~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 200 AVTRRTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp HHHHCCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred HHHhCCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 34455899999999888 3 33322 2237999988765
No 159
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=31.75 E-value=60 Score=23.24 Aligned_cols=38 Identities=13% Similarity=0.068 Sum_probs=25.1
Q ss_pred HHhhhh-cCCcEEEEcCCCc-c--hHHHHH-------HcCCceEEEecc
Q 019759 105 TNFLQD-SRVNWIIHDFISH-W--LPPVAA-------QLGVNSVFFSIY 142 (336)
Q Consensus 105 ~~ll~~-~~~D~vv~D~~~~-~--~~~vA~-------~~~iP~v~~~~~ 142 (336)
.+.+++ .+||+||+|...+ . +..+.+ ..++|+|+++..
T Consensus 42 ~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 90 (140)
T 3lua_A 42 YSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKS 90 (140)
T ss_dssp HTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESC
T ss_pred HHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCC
Confidence 344556 6899999999877 4 333332 245788887654
No 160
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=31.62 E-value=49 Score=23.44 Aligned_cols=36 Identities=14% Similarity=-0.057 Sum_probs=22.3
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+++.+||+||+|...+. +..+.+++ ++|+|+++..
T Consensus 41 ~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 83 (134)
T 3f6c_A 41 RVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAK 83 (134)
T ss_dssp HHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC
T ss_pred HHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCC
Confidence 334457999999987655 44444332 3676666543
No 161
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=31.27 E-value=93 Score=21.85 Aligned_cols=33 Identities=21% Similarity=0.068 Sum_probs=21.9
Q ss_pred cCCcEEEEcCCCcc--hHHHHHH-------cCCceEEEeccc
Q 019759 111 SRVNWIIHDFISHW--LPPVAAQ-------LGVNSVFFSIYS 143 (336)
Q Consensus 111 ~~~D~vv~D~~~~~--~~~vA~~-------~~iP~v~~~~~~ 143 (336)
.+||+||.|...+. +..+.++ -++|+|+++...
T Consensus 54 ~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~ 95 (140)
T 1k68_A 54 SRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSI 95 (140)
T ss_dssp CCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCC
T ss_pred CCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCC
Confidence 57999999987654 4444432 357888776543
No 162
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=31.27 E-value=56 Score=28.88 Aligned_cols=36 Identities=8% Similarity=0.060 Sum_probs=23.6
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+++.+||+||+|..++. +..+++++ ++|+|+++..
T Consensus 44 ~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~pii~lt~~ 86 (394)
T 3eq2_A 44 IFESEQPDLVICDLRMPQIDGLELIRRIRQTASETPIIVLSGA 86 (394)
T ss_dssp HHHHSCCSEEEECCCSSSSCTHHHHHHHHHTTCCCCEEEC---
T ss_pred HHhhCCCCEEEEcCCCCCCCHHHHHHHHHhhCCCCcEEEEEcC
Confidence 445568999999998776 45555443 4788887654
No 163
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=31.18 E-value=74 Score=21.95 Aligned_cols=34 Identities=9% Similarity=0.016 Sum_probs=21.9
Q ss_pred HhhhhcCCcEEEEcCCCc-c--hHHHHHH-------cCCceEEE
Q 019759 106 NFLQDSRVNWIIHDFISH-W--LPPVAAQ-------LGVNSVFF 139 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~-~--~~~vA~~-------~~iP~v~~ 139 (336)
+.+++.+||+||.|...+ . +..+.++ .++|+|++
T Consensus 43 ~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~ 86 (127)
T 2gkg_A 43 EQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII 86 (127)
T ss_dssp HHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE
T ss_pred HHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE
Confidence 344455799999998766 3 4443332 35788877
No 164
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=31.15 E-value=69 Score=25.42 Aligned_cols=37 Identities=11% Similarity=0.097 Sum_probs=24.6
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHH----cCCceEEEeccc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQ----LGVNSVFFSIYS 143 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~----~~iP~v~~~~~~ 143 (336)
.++..+||+||.|...+. +..+++. -++|+|+++...
T Consensus 43 ~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~ 85 (230)
T 2oqr_A 43 EFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARD 85 (230)
T ss_dssp HHHHHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCH
T ss_pred HHhccCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCC
Confidence 344557999999987664 4444432 368888887654
No 165
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=31.08 E-value=35 Score=24.65 Aligned_cols=31 Identities=29% Similarity=0.479 Sum_probs=23.2
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
.+|+++- .|.+- ..+++.|+++||+|+++..
T Consensus 5 m~i~IiG---~G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAG---IGRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC---CCHHH--HHHHHHHHhCCCeEEEEEC
Confidence 5787773 35543 4678999999999999864
No 166
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=31.04 E-value=52 Score=31.21 Aligned_cols=39 Identities=8% Similarity=-0.080 Sum_probs=35.3
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
++.+|++.+.++-.|-+...-++..|..+|++|+.+...
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCC
Confidence 356899999999999999999999999999999998654
No 167
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=30.98 E-value=42 Score=25.01 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=26.5
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
.+++++. .|. =+.|++.+++.|+++|.+|+++ ..
T Consensus 19 ~~~llIa-GG~-GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 19 GKILAIG-AYT-GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp SEEEEEE-ETT-HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CeEEEEE-CcC-cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 3566665 333 3899999999999999999998 54
No 168
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=30.83 E-value=64 Score=24.82 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=21.6
Q ss_pred EEEEEeCccccCCHHHHHHHHHHHHhCC
Q 019759 272 VVYAAFGTEMTLSQELLHELAYGLEKSG 299 (336)
Q Consensus 272 VVyvSfGS~~~~~~~~~~~ia~al~~~~ 299 (336)
+.|+|+||+..-+.+.++.-.+.|++.+
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6799999998666677777777787653
No 169
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=30.44 E-value=38 Score=27.83 Aligned_cols=20 Identities=35% Similarity=0.622 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 019759 26 FQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 26 l~la~~La~rGh~VT~~t~~ 45 (336)
.++|++|+++|++|+++..+
T Consensus 38 ~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 38 FAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57899999999999998754
No 170
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=30.43 E-value=88 Score=22.04 Aligned_cols=37 Identities=8% Similarity=0.069 Sum_probs=29.0
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEe
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t 43 (336)
+..+|++++..|.|+-.-...+-+.+.++|.++.+-+
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 3467999999999888777778788888998766543
No 171
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=30.11 E-value=82 Score=24.61 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=24.6
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEe
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t 43 (336)
-|++++ +..|...-+..+++.|+++|+.|..+.
T Consensus 30 ~vv~~h-G~~~~~~~~~~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 30 VIVIAQ-DIFGVNAFMRETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp EEEEEC-CTTBSCHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEc-CCCCCCHHHHHHHHHHHhCCcEEEecc
Confidence 344444 555666788999999999999877664
No 172
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=29.68 E-value=42 Score=27.57 Aligned_cols=39 Identities=3% Similarity=-0.072 Sum_probs=25.1
Q ss_pred HHHhhhhc--CCcEEEEcCCCcc---hH----HHHHHcCCceEEEecc
Q 019759 104 LTNFLQDS--RVNWIIHDFISHW---LP----PVAAQLGVNSVFFSIY 142 (336)
Q Consensus 104 ~~~ll~~~--~~D~vv~D~~~~~---~~----~vA~~~~iP~v~~~~~ 142 (336)
+.+++++. +||+|++|..... .. .+...+++|.|.+.-+
T Consensus 93 ~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 93 FLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp HHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 33444443 6999999985443 33 3455568999987654
No 173
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=29.52 E-value=71 Score=22.75 Aligned_cols=37 Identities=5% Similarity=0.062 Sum_probs=23.2
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH-------cCCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ-------LGVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~-------~~iP~v~~~~~ 142 (336)
+.+++.+||+||+|...+. +..++++ -++|+|+++..
T Consensus 48 ~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 93 (143)
T 3cnb_A 48 DLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGA 93 (143)
T ss_dssp HHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESS
T ss_pred HHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCC
Confidence 3445567999999986654 4444432 24677777654
No 174
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=29.45 E-value=58 Score=23.82 Aligned_cols=39 Identities=18% Similarity=0.048 Sum_probs=20.1
Q ss_pred HHHhhhh-cCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 104 LTNFLQD-SRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 104 ~~~ll~~-~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
..+.+++ .+||+||+|...+. +..+.+.+ ++|+|+++..
T Consensus 41 a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 87 (154)
T 2qsj_A 41 ALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGE 87 (154)
T ss_dssp HHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEEC---
T ss_pred HHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEeCC
Confidence 3344555 68999999986654 33333322 4677776543
No 175
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=29.44 E-value=56 Score=26.30 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=23.5
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHH----cCCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQ----LGVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~----~~iP~v~~~~~ 142 (336)
.+.+.+||+||.|...+. +..+++. .++|+|+++..
T Consensus 44 ~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~ 85 (238)
T 2gwr_A 44 AVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAK 85 (238)
T ss_dssp HHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEET
T ss_pred HHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCC
Confidence 334457999999997664 4444443 36788877653
No 176
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=28.90 E-value=74 Score=22.70 Aligned_cols=38 Identities=11% Similarity=0.127 Sum_probs=22.6
Q ss_pred HHHhhhhcCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEec
Q 019759 104 LTNFLQDSRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSI 141 (336)
Q Consensus 104 ~~~ll~~~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~ 141 (336)
..+.+++.+||+||+|...+. +..+.+.+ ++|+|+++.
T Consensus 43 a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 89 (142)
T 3cg4_A 43 CIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTA 89 (142)
T ss_dssp HHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEEC
Confidence 334455567999999986654 44444322 356666554
No 177
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=28.75 E-value=70 Score=29.67 Aligned_cols=40 Identities=8% Similarity=-0.026 Sum_probs=29.9
Q ss_pred CCceEEEEEcCCCccc--hHHHHHHHHH--HHhCCCeEEEEeCC
Q 019759 6 RQKLHIAMFPWLAYGH--IMPFFQVAMF--LAEKGHHVSYISTP 45 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH--~~p~l~la~~--La~rGh~VT~~t~~ 45 (336)
.++.+|+++......| -.-+..+++. |.++||+|++++..
T Consensus 203 ~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 203 KGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 4567899888655444 4557889999 67789999999863
No 178
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=28.73 E-value=90 Score=24.38 Aligned_cols=33 Identities=15% Similarity=0.011 Sum_probs=24.4
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEE
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~ 42 (336)
..|++++ +..|+..-+..+++.|+++|++|..+
T Consensus 23 ~~vv~~H-G~~~~~~~~~~~~~~l~~~G~~v~~~ 55 (251)
T 3dkr_A 23 TGVVLLH-AYTGSPNDMNFMARALQRSGYGVYVP 55 (251)
T ss_dssp EEEEEEC-CTTCCGGGGHHHHHHHHHTTCEEEEC
T ss_pred ceEEEeC-CCCCCHHHHHHHHHHHHHCCCEEEec
Confidence 3455544 55567777899999999999987654
No 179
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=28.60 E-value=34 Score=30.42 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=26.3
Q ss_pred CCCCCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019759 3 LQNRQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 3 ~~~~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~ 46 (336)
+|+.++.+|+++-...-| +..|+.|+.+|++||++..+.
T Consensus 4 ~~~~~~~~~vIvGgG~AG-----l~aA~~L~~~~~~itlie~~~ 42 (385)
T 3klj_A 4 HHHHKSTKILILGAGPAG-----FSAAKAALGKCDDITMINSEK 42 (385)
T ss_dssp ----CBCSEEEECCSHHH-----HHHHHHHTTTCSCEEEECSSS
T ss_pred ccccCCCCEEEEcCcHHH-----HHHHHHHhCCCCEEEEEECCC
Confidence 456778889998754434 556777778899999997653
No 180
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=28.58 E-value=1.1e+02 Score=21.78 Aligned_cols=32 Identities=9% Similarity=-0.008 Sum_probs=21.4
Q ss_pred cCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEecc
Q 019759 111 SRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSIY 142 (336)
Q Consensus 111 ~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~~ 142 (336)
.+||+||+|...+. +..+.+.+ ++|+|+++..
T Consensus 58 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 98 (143)
T 2qvg_A 58 IHPKLILLDINIPKMNGIEFLKELRDDSSFTDIEVFVLTAA 98 (143)
T ss_dssp CCCSEEEEETTCTTSCHHHHHHHHTTSGGGTTCEEEEEESC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCccccCCcEEEEeCC
Confidence 57999999987654 44555432 4677777654
No 181
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=28.53 E-value=39 Score=26.16 Aligned_cols=29 Identities=14% Similarity=0.186 Sum_probs=22.7
Q ss_pred eEEEEEeCccccCCHHHHHHHHHHHHhCC
Q 019759 271 SVVYAAFGTEMTLSQELLHELAYGLEKSG 299 (336)
Q Consensus 271 ~VVyvSfGS~~~~~~~~~~~ia~al~~~~ 299 (336)
..+|+|+||+..-+.+.++.-.+.|++.+
T Consensus 5 ~~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 5 IQAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 36899999998766777777777787753
No 182
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=28.35 E-value=58 Score=29.86 Aligned_cols=33 Identities=18% Similarity=0.144 Sum_probs=22.7
Q ss_pred HHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEE
Q 019759 104 LTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFF 139 (336)
Q Consensus 104 ~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~ 139 (336)
+++++++.++|++|.... ...+|+++|+|.+.+
T Consensus 367 le~~i~~~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 367 LEHAARAGQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHhcCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 455556667888887654 456788888887654
No 183
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=28.28 E-value=82 Score=22.05 Aligned_cols=27 Identities=11% Similarity=0.205 Sum_probs=21.6
Q ss_pred ccchHHHHHHHHHHHhC-CC-eEEEEeCC
Q 019759 19 YGHIMPFFQVAMFLAEK-GH-HVSYISTP 45 (336)
Q Consensus 19 ~gH~~p~l~la~~La~r-Gh-~VT~~t~~ 45 (336)
.......+.+|..+++. || +|+++-..
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 45566779999999998 99 99988653
No 184
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=28.25 E-value=72 Score=26.18 Aligned_cols=37 Identities=11% Similarity=0.098 Sum_probs=24.5
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH-----cCCceEEEecc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIY 142 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~ 142 (336)
+.+++.+||+||+|..++. +..++++ -++|+|+++..
T Consensus 167 ~~l~~~~~dlvl~D~~mp~~~G~~l~~~ir~~~~~~piI~lt~~ 210 (254)
T 2ayx_A 167 NVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTAN 210 (254)
T ss_dssp HHHHHSCCSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEEESS
T ss_pred HHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhcCCCCcEEEEECC
Confidence 3445557999999987664 4444432 25788887654
No 185
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=28.17 E-value=1.1e+02 Score=21.72 Aligned_cols=32 Identities=16% Similarity=0.033 Sum_probs=21.7
Q ss_pred cCCcEEEEcCCCcc--hHHHHHH-------cCCceEEEecc
Q 019759 111 SRVNWIIHDFISHW--LPPVAAQ-------LGVNSVFFSIY 142 (336)
Q Consensus 111 ~~~D~vv~D~~~~~--~~~vA~~-------~~iP~v~~~~~ 142 (336)
.+||+||.|...+. +..+.+. -++|+|+++..
T Consensus 61 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~ 101 (149)
T 1k66_A 61 PRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTS 101 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESC
T ss_pred CCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCC
Confidence 57999999987654 4455443 24677777654
No 186
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=28.14 E-value=50 Score=23.05 Aligned_cols=37 Identities=8% Similarity=0.048 Sum_probs=23.5
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHH-------cCCceEEEeccc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQ-------LGVNSVFFSIYS 143 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~-------~~iP~v~~~~~~ 143 (336)
.++..+||+||.|...+. +..+.++ -++|+|+++...
T Consensus 41 ~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 86 (127)
T 2jba_A 41 QLNEPWPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVVMLTARG 86 (127)
T ss_dssp TCSSSCCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEEEEEETT
T ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHhCcccCCCCEEEEeCCC
Confidence 334457999999986654 4444433 246787776543
No 187
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=28.00 E-value=91 Score=25.46 Aligned_cols=37 Identities=14% Similarity=0.011 Sum_probs=26.7
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
++..|++++. ..++..-+..+++.|+++|++|..+-.
T Consensus 45 ~~p~vv~~hG-~~~~~~~~~~~~~~l~~~g~~v~~~d~ 81 (315)
T 4f0j_A 45 NGRTILLMHG-KNFCAGTWERTIDVLADAGYRVIAVDQ 81 (315)
T ss_dssp CSCEEEEECC-TTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCCeEEEEcC-CCCcchHHHHHHHHHHHCCCeEEEeec
Confidence 3345666654 446666788999999999999887654
No 188
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=27.94 E-value=93 Score=21.78 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=21.4
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc------CCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL------GVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~------~iP~v~~~~~ 142 (336)
.+++.+||+||.|...+. +..+.+++ .+|+|+++..
T Consensus 43 ~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~~ii~ls~~ 86 (130)
T 1dz3_A 43 MLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAF 86 (130)
T ss_dssp HHHHHCCSEEEEESCCSSSCHHHHHHHHHHHCSSCCEEEEEEET
T ss_pred HHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCcEEEEecC
Confidence 344557999999987664 44443322 3456665543
No 189
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=27.87 E-value=72 Score=25.96 Aligned_cols=33 Identities=3% Similarity=-0.089 Sum_probs=26.8
Q ss_pred EEEEc-CCCccchHHHHHHHHHHHhCCCeEEEEe
Q 019759 11 IAMFP-WLAYGHIMPFFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 11 il~~~-~p~~gH~~p~l~la~~La~rGh~VT~~t 43 (336)
|++.. ..+-|=..-...|++.|+++|.+|.++=
T Consensus 7 i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 7 FFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp EEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 44443 3667999999999999999999999873
No 190
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=27.71 E-value=89 Score=25.78 Aligned_cols=41 Identities=17% Similarity=0.057 Sum_probs=0.0
Q ss_pred HHHHHhhhhc--CCcEEEEcCCCcch---------HHHHHHcCCceEEEecc
Q 019759 102 LPLTNFLQDS--RVNWIIHDFISHWL---------PPVAAQLGVNSVFFSIY 142 (336)
Q Consensus 102 ~~~~~ll~~~--~~D~vv~D~~~~~~---------~~vA~~~~iP~v~~~~~ 142 (336)
+.+.+.+++. ++|+||+|.-..+. .++|+.++.|++.+...
T Consensus 119 ~~I~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~~ 170 (242)
T 3qxc_A 119 DNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHD 170 (242)
T ss_dssp HHHHHHHHHGGGTCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEECC
T ss_pred HHHHHHHHHHHhcCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEcC
No 191
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=27.69 E-value=1.1e+02 Score=27.84 Aligned_cols=40 Identities=13% Similarity=0.174 Sum_probs=34.5
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKNI 48 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~~ 48 (336)
..|+++-.+|.|=..-...||..|+++|++|.+++.+...
T Consensus 101 ~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 101 TILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred eEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 4577777899999999999999999999999999876543
No 192
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=27.38 E-value=83 Score=23.50 Aligned_cols=35 Identities=17% Similarity=0.001 Sum_probs=27.1
Q ss_pred EEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 11 IAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 11 il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
++++.....-.+.+-+.+|...+..|++|+++-+.
T Consensus 11 ~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 11 SIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 33444445677888999999999999999999764
No 193
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=27.24 E-value=1.4e+02 Score=23.73 Aligned_cols=35 Identities=9% Similarity=-0.078 Sum_probs=24.6
Q ss_pred eEEEEEcCCCccc--hHHHHHHHHHHHhCCCeEEEEeC
Q 019759 9 LHIAMFPWLAYGH--IMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 9 ~~il~~~~p~~gH--~~p~l~la~~La~rGh~VT~~t~ 44 (336)
..|++++ +..|+ ...+..+++.|+++|+.|..+-.
T Consensus 47 p~vv~~H-G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 83 (270)
T 3pfb_A 47 DMAIIFH-GFTANRNTSLLREIANSLRDENIASVRFDF 83 (270)
T ss_dssp EEEEEEC-CTTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEEc-CCCCCccccHHHHHHHHHHhCCcEEEEEcc
Confidence 3455555 34444 66688999999999998877643
No 194
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=27.23 E-value=1.1e+02 Score=25.92 Aligned_cols=46 Identities=15% Similarity=0.148 Sum_probs=29.7
Q ss_pred CCCCCCCceEEEEEcCCCccch-HHHHHHHHHHHhCCCeEEEEeCCC
Q 019759 1 MDLQNRQKLHIAMFPWLAYGHI-MPFFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 1 ~~~~~~~~~~il~~~~p~~gH~-~p~l~la~~La~rGh~VT~~t~~~ 46 (336)
|.....++..+++-|..+.|.. .-...+...|.++|+++++..+..
T Consensus 3 m~~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~ 49 (304)
T 3s40_A 3 MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE 49 (304)
T ss_dssp --CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS
T ss_pred CccCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC
Confidence 5444445555666666666653 345677888899999999986643
No 195
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=27.10 E-value=79 Score=27.26 Aligned_cols=36 Identities=11% Similarity=0.098 Sum_probs=24.5
Q ss_pred hhhcCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEeccc
Q 019759 108 LQDSRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSIYS 143 (336)
Q Consensus 108 l~~~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~~~ 143 (336)
+.+.+||+||+|..++. +..+.+.+ .+|+|+++...
T Consensus 59 ~~~~~~dlvl~D~~mp~~~G~~~~~~l~~~~~~~~~~ii~~s~~~ 103 (358)
T 3bre_A 59 ANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLSTKE 103 (358)
T ss_dssp HHHHCCSEEEEESBCSSSBHHHHHHHHTTSTTTTTSCEEEEESSC
T ss_pred HHhCCCCEEEEeCCCCCCCHHHHHHHHhcCcccCCCcEEEEeCCC
Confidence 34457999999998775 45555543 36788776543
No 196
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=27.07 E-value=51 Score=26.35 Aligned_cols=36 Identities=11% Similarity=0.093 Sum_probs=22.7
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~ 142 (336)
.+...+||+||.|..++. +..+++++ ++|+|+++..
T Consensus 42 ~l~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~ 84 (225)
T 3c3w_A 42 RVPAARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSY 84 (225)
T ss_dssp HHHHHCCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGGS
T ss_pred HHhhcCCCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEECC
Confidence 344557999999997664 44444432 4677766543
No 197
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=27.05 E-value=1.1e+02 Score=24.00 Aligned_cols=34 Identities=9% Similarity=0.050 Sum_probs=26.4
Q ss_pred EEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 11 IAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 11 il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
|+++..+...+-.....+++.+++.|++|.++..
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 4555555556677788999999999999988854
No 198
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=26.99 E-value=44 Score=25.83 Aligned_cols=28 Identities=21% Similarity=0.385 Sum_probs=22.3
Q ss_pred EEEEEeCccccCCHHHHHHHHHHHHhCC
Q 019759 272 VVYAAFGTEMTLSQELLHELAYGLEKSG 299 (336)
Q Consensus 272 VVyvSfGS~~~~~~~~~~~ia~al~~~~ 299 (336)
.+|+|+||+..-+.+.++.-.+.|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 4899999999767777777777888753
No 199
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=26.85 E-value=70 Score=25.41 Aligned_cols=34 Identities=15% Similarity=0.055 Sum_probs=23.4
Q ss_pred eEEEEEcCCC---ccchHHHHHHHHHHHhCCCeEEEE
Q 019759 9 LHIAMFPWLA---YGHIMPFFQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 9 ~~il~~~~p~---~gH~~p~l~la~~La~rGh~VT~~ 42 (336)
.+|.++.... ..+..-..+|++.|+++|+.|.+=
T Consensus 14 ~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~G 50 (189)
T 3sbx_A 14 WTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWG 50 (189)
T ss_dssp CEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred eEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEEC
Confidence 5788887544 123445678888999999976654
No 200
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=26.74 E-value=95 Score=24.69 Aligned_cols=36 Identities=14% Similarity=0.356 Sum_probs=25.9
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
+..|++++.. .|+..-+..++..|+++|++|..+-.
T Consensus 12 ~~~vvllHG~-~~~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 12 KKHFVLVHAA-FHGAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp CCEEEEECCT-TCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCeEEEECCC-CCCcchHHHHHHHHHhcCCeEEEecc
Confidence 3456666644 45666677999999999999877643
No 201
>2e6x_A TT1592, hypothetical protein TTHA1281; unknown function protein, NPPSFA, national project on protei structural and functional analyses; 2.00A {Thermus thermophilus}
Probab=26.36 E-value=50 Score=20.96 Aligned_cols=18 Identities=22% Similarity=0.409 Sum_probs=15.3
Q ss_pred HHHHhCCCceEEEEeCCC
Q 019759 293 YGLEKSGLPFIWIIKNRP 310 (336)
Q Consensus 293 ~al~~~~~~~lW~~r~~~ 310 (336)
+.|+++|+..+|.+.+++
T Consensus 4 d~L~~LG~~LvWRiGk~e 21 (69)
T 2e6x_A 4 DLLDKLGQHLVWRMGRAE 21 (69)
T ss_dssp HHHHHTTCCEEEEEEECS
T ss_pred HHHHHHhceeEEeecccc
Confidence 357888999999999885
No 202
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=26.14 E-value=1.1e+02 Score=24.83 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=23.4
Q ss_pred EEEEEcCCCcc----chHHHHHHHHHHHhCCCeEEEE
Q 019759 10 HIAMFPWLAYG----HIMPFFQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 10 ~il~~~~p~~g----H~~p~l~la~~La~rGh~VT~~ 42 (336)
.|.++.....+ +..-..+|++.|+++|+.|.+=
T Consensus 11 ~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~G 47 (216)
T 1ydh_A 11 KICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYG 47 (216)
T ss_dssp EEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred eEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEEC
Confidence 58888544432 4557788999999999876543
No 203
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=26.11 E-value=63 Score=26.47 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=22.0
Q ss_pred EEEEEcCCCccch--HHHHHHHHHHHhCCCeEEEEeC
Q 019759 10 HIAMFPWLAYGHI--MPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 10 ~il~~~~p~~gH~--~p~l~la~~La~rGh~VT~~t~ 44 (336)
-++++..++.+|- .-+..+++.|+++|+.|..+-.
T Consensus 57 p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~ 93 (259)
T 4ao6_A 57 RLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDG 93 (259)
T ss_dssp EEEEEEC--------CHHHHHHHHHHHTTEEEEEECC
T ss_pred CEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeecc
Confidence 4666666666663 3478999999999997776643
No 204
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=25.96 E-value=1.2e+02 Score=22.00 Aligned_cols=34 Identities=9% Similarity=-0.033 Sum_probs=22.4
Q ss_pred hcCCcEEEEcCCCcc--hHHHHHH-------cCCceEEEeccc
Q 019759 110 DSRVNWIIHDFISHW--LPPVAAQ-------LGVNSVFFSIYS 143 (336)
Q Consensus 110 ~~~~D~vv~D~~~~~--~~~vA~~-------~~iP~v~~~~~~ 143 (336)
+.+||+||+|...+. +..++++ .++|+|+++...
T Consensus 57 ~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 99 (152)
T 3heb_A 57 AGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTD 99 (152)
T ss_dssp TTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCC
T ss_pred cCCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 457999999987665 4444432 346888776543
No 205
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=25.88 E-value=1.1e+02 Score=24.43 Aligned_cols=34 Identities=18% Similarity=-0.002 Sum_probs=24.3
Q ss_pred eEEEEEcCCCccc--hHHHHHHHHHHHhCCCeEEEEe
Q 019759 9 LHIAMFPWLAYGH--IMPFFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 9 ~~il~~~~p~~gH--~~p~l~la~~La~rGh~VT~~t 43 (336)
..|+++. +..|+ ..-+..+++.|+++|++|..+-
T Consensus 28 p~vvl~H-G~~~~~~~~~~~~~~~~l~~~g~~vi~~D 63 (251)
T 2wtm_A 28 PLCIIIH-GFTGHSEERHIVAVQETLNEIGVATLRAD 63 (251)
T ss_dssp EEEEEEC-CTTCCTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEc-CCCcccccccHHHHHHHHHHCCCEEEEec
Confidence 3455554 45566 6677889999999999887653
No 206
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=25.84 E-value=56 Score=27.07 Aligned_cols=31 Identities=16% Similarity=-0.046 Sum_probs=23.8
Q ss_pred EEEEcCCCccchHHHHHHHHHHHhCCCeEEEE
Q 019759 11 IAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 11 il~~~~p~~gH~~p~l~la~~La~rGh~VT~~ 42 (336)
|+++. +..|+..-+..+++.|+++|++|..+
T Consensus 54 VlllH-G~~~s~~~~~~la~~La~~Gy~Via~ 84 (281)
T 4fbl_A 54 VLVSH-GFTGSPQSMRFLAEGFARAGYTVATP 84 (281)
T ss_dssp EEEEC-CTTCCGGGGHHHHHHHHHTTCEEEEC
T ss_pred EEEEC-CCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 55554 55577777899999999999987654
No 207
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=25.52 E-value=87 Score=26.00 Aligned_cols=38 Identities=13% Similarity=0.123 Sum_probs=28.7
Q ss_pred CCceEEEEEc--CCCccchHHHHHHHHHHHhCCCeEEEEe
Q 019759 6 RQKLHIAMFP--WLAYGHIMPFFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 6 ~~~~~il~~~--~p~~gH~~p~l~la~~La~rGh~VT~~t 43 (336)
.++.+.++++ ..+-|=......|++.|+++|++|.++=
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 3444544443 3556889999999999999999999974
No 208
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=25.43 E-value=49 Score=23.99 Aligned_cols=37 Identities=16% Similarity=0.003 Sum_probs=25.6
Q ss_pred CCeEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEE
Q 019759 269 NNSVVYAAFGTEMTLSQELLHELAYGLEKSGLPFIWI 305 (336)
Q Consensus 269 ~~~VVyvSfGS~~~~~~~~~~~ia~al~~~~~~~lW~ 305 (336)
+.++|+|+.||...-..+.+.++++.+++...+|-+.
T Consensus 5 ~~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a 41 (126)
T 3lyh_A 5 PHQIILLAHGSSDARWCETFEKLAEPTVESIENAAIA 41 (126)
T ss_dssp CEEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 4679999999975333456778888887654455444
No 209
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=25.13 E-value=1.1e+02 Score=23.78 Aligned_cols=38 Identities=13% Similarity=0.071 Sum_probs=24.3
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHH----cCCceEEEeccc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQ----LGVNSVFFSIYS 143 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~----~~iP~v~~~~~~ 143 (336)
+.+...+||+||+|..++. +..+++. ...|+|+++...
T Consensus 52 ~~~~~~~~dlvi~D~~~p~~~g~~~~~~l~~~~~~pii~lt~~~ 95 (205)
T 1s8n_A 52 ELAELHKPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFS 95 (205)
T ss_dssp HHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCSCEEEEEEGG
T ss_pred HHHhhcCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEecCC
Confidence 3444557999999997764 4444433 346777776543
No 210
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=25.11 E-value=42 Score=26.82 Aligned_cols=36 Identities=6% Similarity=-0.025 Sum_probs=23.3
Q ss_pred hhhhcCCcEEEEcCCCcch--HHHHH---H---cCCceEEEecc
Q 019759 107 FLQDSRVNWIIHDFISHWL--PPVAA---Q---LGVNSVFFSIY 142 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~~--~~vA~---~---~~iP~v~~~~~ 142 (336)
++...+||+||.|..++.. ..+++ + -++|+|+++..
T Consensus 49 ~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~ 92 (225)
T 3klo_A 49 KPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKEVIINCP 92 (225)
T ss_dssp CSGGGGCCEEEEEGGGCCHHHHHHHHHHHHHHCTTCEEEEEEEC
T ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHhhCCCCcEEEEECC
Confidence 3445579999999987763 33432 2 24777777653
No 211
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=24.98 E-value=53 Score=27.82 Aligned_cols=31 Identities=23% Similarity=0.058 Sum_probs=21.2
Q ss_pred EEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 11 IAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 11 il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
.++++ ++.|.+ =..|+++|+++||+|+.+.-
T Consensus 14 ~vlVT-GatG~i--G~~l~~~L~~~G~~V~~~~r 44 (321)
T 2pk3_A 14 RALIT-GVAGFV--GKYLANHLTEQNVEVFGTSR 44 (321)
T ss_dssp EEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred eEEEE-CCCChH--HHHHHHHHHHCCCEEEEEec
Confidence 33344 444544 25788999999999998864
No 212
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=24.74 E-value=44 Score=27.87 Aligned_cols=27 Identities=19% Similarity=-0.009 Sum_probs=19.8
Q ss_pred CCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 16 WLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 16 ~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
.++.|-+ =..|+++|+++||+|+.+.-
T Consensus 18 tGatG~i--G~~l~~~L~~~g~~V~~~~r 44 (292)
T 1vl0_A 18 TGANGQL--GREIQKQLKGKNVEVIPTDV 44 (292)
T ss_dssp ESTTSHH--HHHHHHHHTTSSEEEEEECT
T ss_pred ECCCChH--HHHHHHHHHhCCCeEEeccC
Confidence 3555544 35688999999999998753
No 213
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=24.69 E-value=1.3e+02 Score=22.32 Aligned_cols=36 Identities=8% Similarity=-0.101 Sum_probs=23.0
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHH----HcCCceEEEec
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAA----QLGVNSVFFSI 141 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~----~~~iP~v~~~~ 141 (336)
+.+++.+||+||+|...+. +..+++ ...+|+|+++.
T Consensus 65 ~~l~~~~~dlvilD~~l~~~~g~~l~~~lr~~~~~~ii~~s~ 106 (164)
T 3t8y_A 65 EKAIELKPDVITMDIEMPNLNGIEALKLIMKKAPTRVIMVSS 106 (164)
T ss_dssp HHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHSCCEEEEEES
T ss_pred HHhccCCCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEec
Confidence 3445558999999987655 344433 34467777655
No 214
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=24.52 E-value=1.1e+02 Score=22.14 Aligned_cols=25 Identities=24% Similarity=0.183 Sum_probs=20.5
Q ss_pred cchHHHHHHHHHHHhCCCeE-EEEeC
Q 019759 20 GHIMPFFQVAMFLAEKGHHV-SYIST 44 (336)
Q Consensus 20 gH~~p~l~la~~La~rGh~V-T~~t~ 44 (336)
.....-+.++..+++.||+| +++-.
T Consensus 15 ~~~~~al~~a~a~~~~g~~v~~vff~ 40 (130)
T 2hy5_A 15 QASDSAYQFAKAALEKGHEIFRVFFY 40 (130)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCeeCEEEEe
Confidence 45667789999999999999 88754
No 215
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=24.30 E-value=1.2e+02 Score=21.60 Aligned_cols=32 Identities=13% Similarity=-0.208 Sum_probs=20.7
Q ss_pred cCCcEEEEcCCCcc--hHHHHH---H------cCCceEEEecc
Q 019759 111 SRVNWIIHDFISHW--LPPVAA---Q------LGVNSVFFSIY 142 (336)
Q Consensus 111 ~~~D~vv~D~~~~~--~~~vA~---~------~~iP~v~~~~~ 142 (336)
.+||+||+|...+. +..+.+ + ..+|+|+++..
T Consensus 59 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~ 101 (146)
T 3ilh_A 59 RWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSS 101 (146)
T ss_dssp CCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCC
Confidence 57999999997665 344433 2 34677766554
No 216
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=24.24 E-value=81 Score=27.58 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=26.9
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
+..++++.....|.-.-+..+++.|+++|+.|..+-.
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~ 133 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEH 133 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEecc
Confidence 4455555555556666778999999999998776643
No 217
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=24.24 E-value=72 Score=25.42 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=23.3
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
..+|.++-....| ..+++.|+++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 4567777644444 5678999999999998854
No 218
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=24.18 E-value=1.6e+02 Score=22.74 Aligned_cols=48 Identities=10% Similarity=-0.004 Sum_probs=34.2
Q ss_pred HHhhHHHHHhhhhcCCcEEEEcCCCc-c----h----------HHHHHHcCCceEEEeccchH
Q 019759 98 DLLQLPLTNFLQDSRVNWIIHDFISH-W----L----------PPVAAQLGVNSVFFSIYSAA 145 (336)
Q Consensus 98 ~~~~~~~~~ll~~~~~D~vv~D~~~~-~----~----------~~vA~~~~iP~v~~~~~~~~ 145 (336)
..+.+.+.+++++.+||.+.+|..+. - + ..++.+.|+|+.-+.+.-..
T Consensus 49 ~~I~~~l~~~i~~~~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~~vK 111 (166)
T 4ep4_A 49 GRIHARVLEVLHRFRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPMQVK 111 (166)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHHHH
Confidence 34667888899988999999996332 1 1 24467889999888776544
No 219
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=24.16 E-value=28 Score=32.04 Aligned_cols=33 Identities=12% Similarity=0.155 Sum_probs=26.2
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
++.||+++-.+-.| ..||+.|.+.||+||++=.
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~ 34 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDK 34 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEES
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEEC
Confidence 56788888765545 4689999999999999954
No 220
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=23.87 E-value=77 Score=25.66 Aligned_cols=34 Identities=9% Similarity=-0.024 Sum_probs=25.2
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEE
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~ 42 (336)
..++++..++.++..-+..+++.|+++|+.|..+
T Consensus 49 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~ 82 (258)
T 2fx5_A 49 HPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAA 82 (258)
T ss_dssp EEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEE
T ss_pred ceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEe
Confidence 3445555555567788899999999999987765
No 221
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=23.85 E-value=1e+02 Score=24.38 Aligned_cols=33 Identities=6% Similarity=-0.089 Sum_probs=27.6
Q ss_pred EEEEEcC-CCccchHHHHHHHHHHHhCCCeEEEE
Q 019759 10 HIAMFPW-LAYGHIMPFFQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 10 ~il~~~~-p~~gH~~p~l~la~~La~rGh~VT~~ 42 (336)
.|++... ++-|=..-...||..|+++|++|.++
T Consensus 3 ~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3555553 77899999999999999999999986
No 222
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=23.74 E-value=2.8e+02 Score=22.16 Aligned_cols=106 Identities=7% Similarity=-0.054 Sum_probs=59.3
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCCC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEK--GHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELPI 87 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~r--Gh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (336)
+|+++.+.. |+ .+..|...+.+. +|+|..+.+........+.. ...+|.+..++. ..+. +
T Consensus 2 ri~vl~Sg~-gs--nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A--~~~gIp~~~~~~---~~~~-------~--- 63 (212)
T 1jkx_A 2 NIVVLISGN-GS--NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERA--RQAGIATHTLIA---SAFD-------S--- 63 (212)
T ss_dssp EEEEEESSC-CH--HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHH--HHTTCEEEECCG---GGCS-------S---
T ss_pred EEEEEEECC-cH--HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHH--HHcCCcEEEeCc---cccc-------c---
Confidence 566666544 43 377777777766 58887776543322111100 013666665431 1110 0
Q ss_pred CchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcc-hHHHHHHcCCceEEEecc
Q 019759 88 HKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHW-LPPVAAQLGVNSVFFSIY 142 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~-~~~vA~~~~iP~v~~~~~ 142 (336)
+ ....+.+.+.+++.++|++|+=.|..- ...+-..+...++-+.++
T Consensus 64 ------r---~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 64 ------R---EAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ------H---HHHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------h---hhccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0 112345666777889999999876544 345666666677777665
No 223
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=23.72 E-value=52 Score=26.47 Aligned_cols=19 Identities=21% Similarity=0.132 Sum_probs=16.6
Q ss_pred HHHHHHHHhCCCeEEEEeC
Q 019759 26 FQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 26 l~la~~La~rGh~VT~~t~ 44 (336)
..++++|+++||+|+.++-
T Consensus 35 ~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 35 RYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHhCCCeEEEEEC
Confidence 5788999999999999874
No 224
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=23.70 E-value=1.2e+02 Score=24.22 Aligned_cols=34 Identities=9% Similarity=-0.019 Sum_probs=23.5
Q ss_pred eEEEEEcCCC---ccchHHHHHHHHHHHhCCCeEEEE
Q 019759 9 LHIAMFPWLA---YGHIMPFFQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 9 ~~il~~~~p~---~gH~~p~l~la~~La~rGh~VT~~ 42 (336)
.+|.++.... .-+..-..+|+++|+++|+.|.+-
T Consensus 23 ~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~G 59 (199)
T 3qua_A 23 WAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSG 59 (199)
T ss_dssp CEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 5788886443 123456688999999999977543
No 225
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=23.69 E-value=1.4e+02 Score=22.87 Aligned_cols=47 Identities=6% Similarity=0.050 Sum_probs=33.0
Q ss_pred HhhHHHHHhhhhcCCcEEEEcC-CCcc-------------h-HHHHHHcCCceEEEeccchH
Q 019759 99 LLQLPLTNFLQDSRVNWIIHDF-ISHW-------------L-PPVAAQLGVNSVFFSIYSAA 145 (336)
Q Consensus 99 ~~~~~~~~ll~~~~~D~vv~D~-~~~~-------------~-~~vA~~~~iP~v~~~~~~~~ 145 (336)
.+...+.+++++.+||.+.+|- |+.- . ..++.+.++|+.-+.+.-..
T Consensus 46 ~i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~~vK 107 (158)
T 1hjr_A 46 LIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVK 107 (158)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHHHH
Confidence 4566788888888999999886 3322 1 24567888998888775443
No 226
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=23.64 E-value=1.1e+02 Score=27.87 Aligned_cols=77 Identities=12% Similarity=0.226 Sum_probs=44.3
Q ss_pred hchHhHHHHHHhhhCCCeeeeeeccCCCCCCCCCCCccccccc---cccC--CCCeEEEEEeCccccCCHHHHHHHHHHH
Q 019759 221 EFEPDALRLLGKMLQKPVLPVGLLAPSLQDSAAGEHWPVLKDW---LDSK--ENNSVVYAAFGTEMTLSQELLHELAYGL 295 (336)
Q Consensus 221 ~le~~~~~~l~~~~~p~v~~VGpl~~~~~~~~~~~~~~~l~~w---Ld~~--~~~~VVyvSfGS~~~~~~~~~~~ia~al 295 (336)
.+++.-++.++....|-=+=|||-.. +.++... ||.. +.+=.+..=||.-.. .+.+=.++++.
T Consensus 287 qlDgAHVef~rgI~NPIGvKvGP~~~----------p~elv~L~~~LnP~~epGRlTLI~RmGa~kv--~~~LP~li~aV 354 (462)
T 3rzi_A 287 QIDGAHIAFAQVIANPVGVKLGPNMT----------PELAVEYVERLDPHNKPGRLTLVSRMGNHKV--RDLLPPIVEKV 354 (462)
T ss_dssp CTTSHHHHHHHHCCSCEEEEECTTCC----------HHHHHHHHHHHCTTCCTTSEEEEECCCTTTH--HHHHHHHHHHH
T ss_pred CCCccHHHHHhcCCCCeeEeECCCCC----------HHHHHHHHHHhCCCCCCCeEEEEEccCCchh--hhhHHHHHHHH
Confidence 45555555555543444455666442 3344433 3322 234334444665332 35566799999
Q ss_pred HhCCCceEEEEeCC
Q 019759 296 EKSGLPFIWIIKNR 309 (336)
Q Consensus 296 ~~~~~~~lW~~r~~ 309 (336)
++.|++|+|+..+=
T Consensus 355 ~~~G~~VvW~cDPM 368 (462)
T 3rzi_A 355 QATGHQVIWQCDPM 368 (462)
T ss_dssp HHTSCCCEEEECCS
T ss_pred HHCCCCeEEEeCCC
Confidence 99999999998763
No 227
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=23.41 E-value=1.7e+02 Score=23.64 Aligned_cols=109 Identities=6% Similarity=-0.002 Sum_probs=59.0
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHh-CCCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAE-KGHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAEL 85 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~-rGh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 85 (336)
++.+|+++.+.. ||. +.+|..+..+ .+++|..+.+........+. ....+|.+..++. ..++ +
T Consensus 4 ~~~riavl~SG~-Gsn--l~all~~~~~~~~~eI~~Vis~~~~a~~~~~--A~~~gIp~~~~~~---~~~~-------~- 67 (215)
T 3tqr_A 4 EPLPIVVLISGN-GTN--LQAIIGAIQKGLAIEIRAVISNRADAYGLKR--AQQADIPTHIIPH---EEFP-------S- 67 (215)
T ss_dssp CCEEEEEEESSC-CHH--HHHHHHHHHTTCSEEEEEEEESCTTCHHHHH--HHHTTCCEEECCG---GGSS-------S-
T ss_pred CCcEEEEEEeCC-cHH--HHHHHHHHHcCCCCEEEEEEeCCcchHHHHH--HHHcCCCEEEeCc---cccC-------c-
Confidence 456888887655 443 3444455444 36888877664322111000 0012566655541 1111 0
Q ss_pred CCCchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcc-hHHHHHHcCCceEEEecc
Q 019759 86 PIHKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHW-LPPVAAQLGVNSVFFSIY 142 (336)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~-~~~vA~~~~iP~v~~~~~ 142 (336)
+. ...+.+.+.+++.++|++|+=.|..- ...+-......++-+.++
T Consensus 68 --------r~---~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 --------RT---DFESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp --------HH---HHHHHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --------hh---HhHHHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 00 11345667778889999999876544 345666666677777765
No 228
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=23.41 E-value=54 Score=25.83 Aligned_cols=19 Identities=21% Similarity=0.268 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCCeEEEEeC
Q 019759 26 FQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 26 l~la~~La~rGh~VT~~t~ 44 (336)
..++++|+++||+|+.++-
T Consensus 14 ~~l~~~L~~~g~~V~~~~R 32 (221)
T 3ew7_A 14 SRILEEAKNRGHEVTAIVR 32 (221)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHhCCCEEEEEEc
Confidence 5789999999999999874
No 229
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=23.37 E-value=1.5e+02 Score=21.44 Aligned_cols=37 Identities=11% Similarity=-0.002 Sum_probs=22.2
Q ss_pred hhhhcC-CcEEEEcCCCcc--hHHHHHH-----cCCceEEEeccc
Q 019759 107 FLQDSR-VNWIIHDFISHW--LPPVAAQ-----LGVNSVFFSIYS 143 (336)
Q Consensus 107 ll~~~~-~D~vv~D~~~~~--~~~vA~~-----~~iP~v~~~~~~ 143 (336)
.+++.+ +|+||+|...+. +..+.+. -++|+|+++...
T Consensus 42 ~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 86 (151)
T 3kcn_A 42 CIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQ 86 (151)
T ss_dssp HHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGG
T ss_pred HHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCC
Confidence 344444 699999987655 4444432 246777766543
No 230
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=23.35 E-value=93 Score=27.05 Aligned_cols=39 Identities=5% Similarity=-0.138 Sum_probs=28.9
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKN 47 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~ 47 (336)
.+|++.|.|.-|.-+....++..|++-|.+|++++|+..
T Consensus 169 l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~ 207 (324)
T 1js1_X 169 VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGY 207 (324)
T ss_dssp EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTC
T ss_pred EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCccc
Confidence 567776666667777788888888888888888877543
No 231
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=23.28 E-value=1.3e+02 Score=24.78 Aligned_cols=32 Identities=9% Similarity=-0.008 Sum_probs=22.7
Q ss_pred CCcEEEEcCCCcc-------hHHHHHHcCCceEEEeccc
Q 019759 112 RVNWIIHDFISHW-------LPPVAAQLGVNSVFFSIYS 143 (336)
Q Consensus 112 ~~D~vv~D~~~~~-------~~~vA~~~~iP~v~~~~~~ 143 (336)
+||++++|..... |.-+.-.+++|.|.+.-+.
T Consensus 107 ~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs~ 145 (237)
T 3goc_A 107 PPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKNP 145 (237)
T ss_dssp CCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEESSC
T ss_pred CCCEEEEeCceeecCCCcchhheeeeecCCCEEeeeccc
Confidence 6999999985432 2345567779999986543
No 232
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=23.27 E-value=86 Score=25.91 Aligned_cols=32 Identities=19% Similarity=0.014 Sum_probs=22.8
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
+.++++-.+.| -=.+++++|+++|++|+++.-
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 45666644432 246789999999999998753
No 233
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=22.74 E-value=54 Score=23.93 Aligned_cols=31 Identities=10% Similarity=0.006 Sum_probs=23.5
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
.|++++-. |. -=..+++.|+++||+|+++..
T Consensus 7 ~~v~I~G~---G~--iG~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGS---EA--AGVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CSEEEECC---SH--HHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECC---CH--HHHHHHHHHHHCCCeEEEEEC
Confidence 36777754 44 246789999999999999864
No 234
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=22.45 E-value=66 Score=27.97 Aligned_cols=37 Identities=11% Similarity=0.284 Sum_probs=24.4
Q ss_pred HHHHhhhhcCCcEEEEcCCCcch-HHHHHHcCCceEEEe
Q 019759 103 PLTNFLQDSRVNWIIHDFISHWL-PPVAAQLGVNSVFFS 140 (336)
Q Consensus 103 ~~~~ll~~~~~D~vv~D~~~~~~-~~vA~~~~iP~v~~~ 140 (336)
.+++++. .+||+||........ ..+.+.+|+|++.+.
T Consensus 88 n~E~Ila-l~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 88 DLESLIT-LQPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CHHHHHH-HCCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CHHHHhc-CCCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 3454443 489999987643222 245678899998874
No 235
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=22.39 E-value=1.3e+02 Score=23.77 Aligned_cols=36 Identities=17% Similarity=0.082 Sum_probs=25.7
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
+..|++++. ..|+..-+..+++.|+++|++|..+-.
T Consensus 26 ~~~vv~~hG-~~~~~~~~~~~~~~l~~~G~~v~~~d~ 61 (286)
T 3qit_A 26 HPVVLCIHG-ILEQGLAWQEVALPLAAQGYRVVAPDL 61 (286)
T ss_dssp SCEEEEECC-TTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEECC-CCcccchHHHHHHHhhhcCeEEEEECC
Confidence 345666664 445555678999999999998877643
No 236
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=22.38 E-value=65 Score=27.69 Aligned_cols=32 Identities=31% Similarity=0.311 Sum_probs=23.9
Q ss_pred CCceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEE
Q 019759 6 RQKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~ 42 (336)
..+.+|+++-.+..| ..+|..|++.||+|+++
T Consensus 17 ~~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp ---CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 345678888766655 46788999999999999
No 237
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=22.37 E-value=1.3e+02 Score=24.13 Aligned_cols=35 Identities=17% Similarity=-0.098 Sum_probs=24.9
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
..|++++ +..++..-+..+++.|+++|++|..+-.
T Consensus 43 ~~vv~~h-G~~~~~~~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 43 ALIFVSH-GAGEHSGRYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp EEEEEEC-CTTCCGGGGHHHHHHHHHTTEEEEEECC
T ss_pred eEEEEEC-CCCchhhHHHHHHHHHHhCCCcEEEeCC
Confidence 3455555 4446666788999999999998876643
No 238
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=22.24 E-value=1.4e+02 Score=26.09 Aligned_cols=33 Identities=9% Similarity=0.115 Sum_probs=25.0
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
+|.+.. .+.|-..-...|+++|.++| +|.+.++
T Consensus 42 ~iwih~-~s~G~~~~~~~L~~~L~~~~-~v~v~~~ 74 (374)
T 2xci_A 42 ALWVHT-ASIGEFNTFLPILKELKREH-RILLTYF 74 (374)
T ss_dssp CEEEEC-SSHHHHHHHHHHHHHHHHHS-CEEEEES
T ss_pred CEEEEc-CCHHHHHHHHHHHHHHHhcC-CEEEEEc
Confidence 344444 55677889999999999999 8876654
No 239
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=22.16 E-value=1.1e+02 Score=25.57 Aligned_cols=41 Identities=15% Similarity=-0.004 Sum_probs=30.1
Q ss_pred HHHHHhhhhcCCcEEEEcCCCc------chHHHHHHcCCceEEEecc
Q 019759 102 LPLTNFLQDSRVNWIIHDFISH------WLPPVAAQLGVNSVFFSIY 142 (336)
Q Consensus 102 ~~~~~ll~~~~~D~vv~D~~~~------~~~~vA~~~~iP~v~~~~~ 142 (336)
..+.+++++.+||+|++-.-.. -+..+|.++++|.+...+.
T Consensus 102 ~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 102 RILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 3444555555899999987553 2458999999999987653
No 240
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=22.02 E-value=1.7e+02 Score=26.44 Aligned_cols=40 Identities=20% Similarity=0.135 Sum_probs=34.1
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhC-CCeEEEEeCCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEK-GHHVSYISTPKNI 48 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~r-Gh~VT~~t~~~~~ 48 (336)
..|+++..+|.|=..-...||..|+++ |++|.++..+...
T Consensus 101 ~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 347777778889999999999999999 9999999886543
No 241
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=22.02 E-value=1.1e+02 Score=27.53 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=25.1
Q ss_pred hhhhcCCcEEEEcCCCcc--hHHHHHHc-------CCceEEEeccc
Q 019759 107 FLQDSRVNWIIHDFISHW--LPPVAAQL-------GVNSVFFSIYS 143 (336)
Q Consensus 107 ll~~~~~D~vv~D~~~~~--~~~vA~~~-------~iP~v~~~~~~ 143 (336)
.++..+||+||.|..++. +..+.+++ .+|+|+++...
T Consensus 40 ~~~~~~~dlvllD~~mp~~~G~~~~~~l~~~~~~~~~pii~lt~~~ 85 (459)
T 1w25_A 40 MAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALD 85 (459)
T ss_dssp HHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECSS
T ss_pred HHhcCCCCEEEEcCCCCCCCHHHHHHHHhcCcccCCCCEEEEECCC
Confidence 444557999999998775 45544432 47888887643
No 242
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=21.96 E-value=1.2e+02 Score=25.56 Aligned_cols=39 Identities=15% Similarity=0.334 Sum_probs=28.5
Q ss_pred CCceEEEEEcCCCccchHHH--HHHHHHHHhCC-CeEEEEeCC
Q 019759 6 RQKLHIAMFPWLAYGHIMPF--FQVAMFLAEKG-HHVSYISTP 45 (336)
Q Consensus 6 ~~~~~il~~~~p~~gH~~p~--l~la~~La~rG-h~VT~~t~~ 45 (336)
.++.+||++. ...+|-.+- ..|++.|.+.| ++|++....
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 3568899994 444886553 57777888888 999998753
No 243
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=21.90 E-value=1.2e+02 Score=27.89 Aligned_cols=44 Identities=30% Similarity=0.203 Sum_probs=0.0
Q ss_pred HHHhhHHHHHhhhhcCCcEEEEcCCCc-------------------chHHHHHHcCCceEEEe
Q 019759 97 HDLLQLPLTNFLQDSRVNWIIHDFISH-------------------WLPPVAAQLGVNSVFFS 140 (336)
Q Consensus 97 ~~~~~~~~~~ll~~~~~D~vv~D~~~~-------------------~~~~vA~~~~iP~v~~~ 140 (336)
...+...++++.++.++++||+|.+.. ....+|+++++|+++++
T Consensus 339 ~~~i~~~i~~~~~~~~~~lvVID~l~~l~~~~~~~~~~~~~~~~~~~Lk~lak~~~i~vi~~~ 401 (503)
T 1q57_A 339 TDRLLAKLAYMRSGLGCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVIC 401 (503)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEECTTCCCSCCSCCCHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEEccchhcCCCCCCCCHHHHHHHHHHHHHHHHHHHCCeEEEEE
No 244
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=21.87 E-value=61 Score=24.60 Aligned_cols=36 Identities=19% Similarity=0.191 Sum_probs=27.8
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKN 47 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~ 47 (336)
.+++++. .|.| +.|++.+++.|+++|.+|+++ ....
T Consensus 24 ~~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CeEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 3566665 4445 899999999999999999999 6443
No 245
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=21.82 E-value=52 Score=29.61 Aligned_cols=31 Identities=16% Similarity=0.271 Sum_probs=23.2
Q ss_pred eEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 9 LHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 9 ~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
.+|+|+-..--| +.+|..|+++|++||++--
T Consensus 23 ~~ViIVGaGpaG-----l~~A~~La~~G~~V~viE~ 53 (430)
T 3ihm_A 23 KRIGIVGAGTAG-----LHLGLFLRQHDVDVTVYTD 53 (430)
T ss_dssp CEEEEECCHHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEECCcHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 467777543333 6788999999999999964
No 246
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=21.74 E-value=78 Score=25.47 Aligned_cols=37 Identities=8% Similarity=-0.022 Sum_probs=31.1
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPK 46 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~ 46 (336)
+|+|..-+|-|=..-...||..|+++|++|.++-.+.
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4677666777889999999999999999999996544
No 247
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=21.73 E-value=59 Score=27.63 Aligned_cols=33 Identities=12% Similarity=0.073 Sum_probs=24.8
Q ss_pred CceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 7 QKLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 7 ~~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
++.+|.|+-....| ..+++.|+++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 44678888655545 4689999999999999854
No 248
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=21.65 E-value=50 Score=28.70 Aligned_cols=28 Identities=18% Similarity=0.089 Sum_probs=20.3
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEE
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~ 42 (336)
.|+|+-..--| +.+|..|+++||+|+++
T Consensus 6 DViIVGaGpaG-----l~~A~~La~~G~~V~v~ 33 (397)
T 3oz2_A 6 DVLVVGGGPGG-----STAARYAAKYGLKTLMI 33 (397)
T ss_dssp EEEEECCSHHH-----HHHHHHHHHTTCCEEEE
T ss_pred CEEEECcCHHH-----HHHHHHHHHCCCcEEEE
Confidence 45555432223 56889999999999998
No 249
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=21.58 E-value=62 Score=25.62 Aligned_cols=19 Identities=16% Similarity=0.193 Sum_probs=16.8
Q ss_pred HHHHHHHHhCCCeEEEEeC
Q 019759 26 FQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 26 l~la~~La~rGh~VT~~t~ 44 (336)
..++++|+++||+|+.++-
T Consensus 14 ~~l~~~L~~~g~~V~~~~R 32 (224)
T 3h2s_A 14 SAIVAEARRRGHEVLAVVR 32 (224)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEEe
Confidence 6789999999999999874
No 250
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=21.45 E-value=1.4e+02 Score=27.76 Aligned_cols=40 Identities=15% Similarity=0.170 Sum_probs=34.4
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTPKN 47 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~~~ 47 (336)
...|+++-.++.|=..-...|+..|+++|++|.+++.+..
T Consensus 101 ~~vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~ 140 (504)
T 2j37_W 101 QNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTF 140 (504)
T ss_dssp -EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEecccc
Confidence 3458888889999999999999999999999999987543
No 251
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=21.35 E-value=48 Score=24.13 Aligned_cols=36 Identities=14% Similarity=0.168 Sum_probs=25.3
Q ss_pred CeEEEEEeCccccCCHHHHHHHHHHHHhC-C-CceEEE
Q 019759 270 NSVVYAAFGTEMTLSQELLHELAYGLEKS-G-LPFIWI 305 (336)
Q Consensus 270 ~~VVyvSfGS~~~~~~~~~~~ia~al~~~-~-~~~lW~ 305 (336)
.++|+|++||...-..+.+.++++.+++. + .+|-+.
T Consensus 4 ~alllv~HGS~~~~~~~~~~~la~~l~~~~~~~~V~~a 41 (133)
T 2xws_A 4 RGLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIA 41 (133)
T ss_dssp EEEEEEECSCCCHHHHHHHHHHHHHHHHHTSSSEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCcEEee
Confidence 47999999997533445677888888764 3 455555
No 252
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=21.34 E-value=1.2e+02 Score=23.55 Aligned_cols=33 Identities=18% Similarity=0.155 Sum_probs=23.0
Q ss_pred EEEEEcCCCc----cchHHHHHHHHHHHhCCCeEEEE
Q 019759 10 HIAMFPWLAY----GHIMPFFQVAMFLAEKGHHVSYI 42 (336)
Q Consensus 10 ~il~~~~p~~----gH~~p~l~la~~La~rGh~VT~~ 42 (336)
.|.++..... -+..-..+|+++|+++|+.|..=
T Consensus 3 ~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~G 39 (171)
T 1weh_A 3 LLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACG 39 (171)
T ss_dssp EEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred EEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeC
Confidence 4666665443 35677889999999998766543
No 253
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=21.26 E-value=1.6e+02 Score=22.55 Aligned_cols=36 Identities=17% Similarity=-0.075 Sum_probs=24.1
Q ss_pred ceEEEEEcC----CCccchHHHHHHHHHHHhCCCeEEEEe
Q 019759 8 KLHIAMFPW----LAYGHIMPFFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 8 ~~~il~~~~----p~~gH~~p~l~la~~La~rGh~VT~~t 43 (336)
+.-|+++.- .+...-..+..+++.|+++|+.|..+.
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d 76 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFN 76 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEEC
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEe
Confidence 444666653 133344457899999999999877654
No 254
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=21.01 E-value=1.8e+02 Score=22.45 Aligned_cols=36 Identities=8% Similarity=0.034 Sum_probs=30.8
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
.+.++-..+.|=..-+..|++.|.++|++|.++...
T Consensus 6 ~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~ 41 (169)
T 1xjc_A 6 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHH 41 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeC
Confidence 467777788899999999999999999999988754
No 255
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=20.99 E-value=74 Score=29.39 Aligned_cols=33 Identities=12% Similarity=-0.097 Sum_probs=23.9
Q ss_pred HHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEE
Q 019759 103 PLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVF 138 (336)
Q Consensus 103 ~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~ 138 (336)
.+++++++.+||++|... ....+|+++|||++-
T Consensus 392 el~~~i~~~~pDL~ig~~---~~~~~a~k~gIP~~~ 424 (483)
T 3pdi_A 392 VLLKTVDEYQADILIAGG---RNMYTALKGRVPFLD 424 (483)
T ss_dssp HHHHHHHHTTCSEEECCG---GGHHHHHHTTCCBCC
T ss_pred HHHHHHHhcCCCEEEECC---chhHHHHHcCCCEEE
Confidence 345556666899999854 356789999999763
No 256
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=20.94 E-value=57 Score=23.59 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=21.1
Q ss_pred Hhhhhc-CCcEEEEcCCCcc--hHHHHH----HcCCceEEEec
Q 019759 106 NFLQDS-RVNWIIHDFISHW--LPPVAA----QLGVNSVFFSI 141 (336)
Q Consensus 106 ~ll~~~-~~D~vv~D~~~~~--~~~vA~----~~~iP~v~~~~ 141 (336)
+.+.+. +||+||+|..++. +..+++ ....|++++..
T Consensus 53 ~~l~~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~iiil~~ 95 (145)
T 3kyj_B 53 DKLAAQPNVDLILLDIEMPVMDGMEFLRHAKLKTRAKICMLSS 95 (145)
T ss_dssp HHHHHCTTCCEEEECTTSCCCTTCHHHHHHHHHCCCEEC-CBS
T ss_pred HHHhcCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEE
Confidence 344455 7999999987665 334443 33456655544
No 257
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=20.93 E-value=3.1e+02 Score=21.85 Aligned_cols=106 Identities=11% Similarity=0.125 Sum_probs=57.1
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCCCCCCeEEEecCCCCCCCCCCCCCCCCCCCC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEK--GHHVSYISTPKNIDRLPQIPTNLSSRLSYIQLPLPQLDGLPEGAESTAELPI 87 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~r--Gh~VT~~t~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (336)
+|+++-+.. |+ .+..+.++|.+. +|+|..+.+......+.... ...+|.+..++. ..+. +
T Consensus 5 ki~vl~sG~-g~--~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A--~~~gIp~~~~~~---~~~~-------~--- 66 (212)
T 3av3_A 5 RLAVFASGS-GT--NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERA--ARENVPAFVFSP---KDYP-------S--- 66 (212)
T ss_dssp EEEEECCSS-CH--HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHH--HHTTCCEEECCG---GGSS-------S---
T ss_pred EEEEEEECC-cH--HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHH--HHcCCCEEEeCc---cccc-------c---
Confidence 566665444 44 366677778776 68887776543222111100 012555554430 1110 0
Q ss_pred CchHHHHHHHHHhhHHHHHhhhhcCCcEEEEcCCCcc-hHHHHHHcCCceEEEecc
Q 019759 88 HKVPYLKKAHDLLQLPLTNFLQDSRVNWIIHDFISHW-LPPVAAQLGVNSVFFSIY 142 (336)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~ll~~~~~D~vv~D~~~~~-~~~vA~~~~iP~v~~~~~ 142 (336)
. ....+.+.+.+++.++|++|+=.|..- ...+-..+...++-+.++
T Consensus 67 ------~---~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 67 ------K---AAFESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ------H---HHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ------h---hhhHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 0 112244556677789999998776544 345666666677777665
No 258
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=20.93 E-value=1.3e+02 Score=29.40 Aligned_cols=43 Identities=16% Similarity=0.374 Sum_probs=38.9
Q ss_pred CCCeEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEeCCC
Q 019759 268 ENNSVVYAAFGTEMTLSQELLHELAYGLEKSGLPFIWIIKNRP 310 (336)
Q Consensus 268 ~~~~VVyvSfGS~~~~~~~~~~~ia~al~~~~~~~lW~~r~~~ 310 (336)
++..|+|-||-+...++++.++.-++-|++.+-.+||-++.+.
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~ 562 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA 562 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH
Confidence 4677999999999999999999999999999999999998763
No 259
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=20.88 E-value=1.1e+02 Score=26.23 Aligned_cols=32 Identities=19% Similarity=0.171 Sum_probs=25.5
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
..+|.|+-....| ..+++.|+++||+|+++..
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 3478888766666 5688999999999999854
No 260
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=20.84 E-value=58 Score=23.52 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=21.7
Q ss_pred EEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 10 HIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 10 ~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
+|+++-. |.+- ..+++.|.++|++|+++..
T Consensus 8 ~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 8 QFAVIGL---GRFG--GSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp SEEEECC---SHHH--HHHHHHHHHTTCCCEEEES
T ss_pred cEEEECC---CHHH--HHHHHHHHHCCCEEEEEeC
Confidence 5777754 3332 4678999999999998864
No 261
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=20.80 E-value=1.5e+02 Score=22.40 Aligned_cols=36 Identities=11% Similarity=0.028 Sum_probs=25.2
Q ss_pred ceEEEEEcCCCccchHHHHH--HHHHHHhCCCeEEEEeC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQ--VAMFLAEKGHHVSYIST 44 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~--la~~La~rGh~VT~~t~ 44 (336)
+..|++++ +..|+...+.. +++.|+++|+.|..+-.
T Consensus 32 ~~~vv~~h-G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 69 (210)
T 1imj_A 32 RFSVLLLH-GIRFSSETWQNLGTLHRLAQAGYRAVAIDL 69 (210)
T ss_dssp SCEEEECC-CTTCCHHHHHHHTHHHHHHHTTCEEEEECC
T ss_pred CceEEEEC-CCCCccceeecchhHHHHHHCCCeEEEecC
Confidence 33455554 55567777777 69999999998877643
No 262
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=20.64 E-value=1.1e+02 Score=24.89 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=25.5
Q ss_pred eEEEEEcCCCcc----chHHHHHHHHHHHhCCCeEEEEe
Q 019759 9 LHIAMFPWLAYG----HIMPFFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 9 ~~il~~~~p~~g----H~~p~l~la~~La~rGh~VT~~t 43 (336)
..|.++.....| +..-...|+++|+++|+.|..=-
T Consensus 38 ~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGG 76 (217)
T 1wek_A 38 PLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGG 76 (217)
T ss_dssp CEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECS
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 357777765544 56778899999999998776543
No 263
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=20.61 E-value=83 Score=29.12 Aligned_cols=33 Identities=9% Similarity=0.079 Sum_probs=23.8
Q ss_pred HHHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEE
Q 019759 103 PLTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVF 138 (336)
Q Consensus 103 ~~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~ 138 (336)
.+++++++.+||++|... ....+|+++|||++-
T Consensus 408 el~~~i~~~~pDL~ig~~---~~~~ia~k~gIP~~~ 440 (492)
T 3u7q_A 408 EFEEFVKRIKPDLIGSGI---KEKFIFQKMGIPFRE 440 (492)
T ss_dssp HHHHHHHHHCCSEEEECH---HHHHHHHHTTCCEEE
T ss_pred HHHHHHHhcCCcEEEeCc---chhHHHHHcCCCEEe
Confidence 345555566889998864 346789999999874
No 264
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=20.58 E-value=64 Score=23.67 Aligned_cols=33 Identities=15% Similarity=0.035 Sum_probs=25.1
Q ss_pred ceEEEEEcCCCccchHHHHHHHHHHHhCCCeEEEEeCC
Q 019759 8 KLHIAMFPWLAYGHIMPFFQVAMFLAEKGHHVSYISTP 45 (336)
Q Consensus 8 ~~~il~~~~p~~gH~~p~l~la~~La~rGh~VT~~t~~ 45 (336)
+.||+++-+...| ..+++.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 3578888654333 57899999999999999754
No 265
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=20.55 E-value=1.3e+02 Score=25.10 Aligned_cols=40 Identities=13% Similarity=0.018 Sum_probs=29.3
Q ss_pred HHHHhhhhcCCcEEEEcCCCc------chHHHHHHcCCceEEEecc
Q 019759 103 PLTNFLQDSRVNWIIHDFISH------WLPPVAAQLGVNSVFFSIY 142 (336)
Q Consensus 103 ~~~~ll~~~~~D~vv~D~~~~------~~~~vA~~~~iP~v~~~~~ 142 (336)
.+.+++++.+||+|++-.-.. -+..+|.++|+|.+...+.
T Consensus 107 ~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 107 VLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 344455555799999987553 2468999999999887653
No 266
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=20.52 E-value=1.2e+02 Score=26.80 Aligned_cols=38 Identities=8% Similarity=0.087 Sum_probs=25.2
Q ss_pred HhhhhcCCcEEEEcCCCcc--hHHHHHHc-----CCceEEEeccc
Q 019759 106 NFLQDSRVNWIIHDFISHW--LPPVAAQL-----GVNSVFFSIYS 143 (336)
Q Consensus 106 ~ll~~~~~D~vv~D~~~~~--~~~vA~~~-----~iP~v~~~~~~ 143 (336)
+.+++.+||+||+|..++. +..+.+++ .+|+|+++...
T Consensus 38 ~~l~~~~~DlvllD~~mp~~dG~ell~~lr~~~~~~pvIvlT~~~ 82 (387)
T 1ny5_A 38 KLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHG 82 (387)
T ss_dssp HHHHHSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEEETT
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCC
Confidence 4455568999999997765 44444332 47888876543
No 267
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=20.42 E-value=1.2e+02 Score=26.78 Aligned_cols=35 Identities=17% Similarity=0.124 Sum_probs=28.8
Q ss_pred eEEEEEcCCCc-cchHHHHHHHHHHHhCCCeEEEEe
Q 019759 9 LHIAMFPWLAY-GHIMPFFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 9 ~~il~~~~p~~-gH~~p~l~la~~La~rGh~VT~~t 43 (336)
.+|+++.--+- ..+.=++.|++.|.++|++|++..
T Consensus 213 k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~v 248 (367)
T 1xfi_A 213 KKAVIFVDNSGADIILGILPFARELLRRGAQVVLAA 248 (367)
T ss_dssp CEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEE
Confidence 57888886553 677777999999999999999875
No 268
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=20.42 E-value=75 Score=27.42 Aligned_cols=37 Identities=8% Similarity=0.079 Sum_probs=24.4
Q ss_pred HHHhhhhcCCcEEEEcCCCcchHHHHHHcCCceEEEec
Q 019759 104 LTNFLQDSRVNWIIHDFISHWLPPVAAQLGVNSVFFSI 141 (336)
Q Consensus 104 ~~~ll~~~~~D~vv~D~~~~~~~~vA~~~~iP~v~~~~ 141 (336)
+++++ ..+||+||..........--++.|+|++.+..
T Consensus 109 ~E~i~-al~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 109 TEACV-AATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHH-HTCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHHHH-hcCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 44443 35899999976433334445678899998854
No 269
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=20.37 E-value=1.6e+02 Score=23.78 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=22.5
Q ss_pred EEEEEcCCCcc----chHHHHHHHHHHHhCCCeEEE
Q 019759 10 HIAMFPWLAYG----HIMPFFQVAMFLAEKGHHVSY 41 (336)
Q Consensus 10 ~il~~~~p~~g----H~~p~l~la~~La~rGh~VT~ 41 (336)
.|.++.....+ +..-...|+++|+++|+.|+.
T Consensus 15 ~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVs 50 (215)
T 2a33_A 15 RICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVY 50 (215)
T ss_dssp EEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEE
Confidence 58888544432 234567889999999987764
No 270
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=20.35 E-value=60 Score=26.96 Aligned_cols=33 Identities=15% Similarity=0.020 Sum_probs=25.2
Q ss_pred eEEEEEcCCCc--cchHHHHHHHHHHHhCCCeEEEEeC
Q 019759 9 LHIAMFPWLAY--GHIMPFFQVAMFLAEKGHHVSYIST 44 (336)
Q Consensus 9 ~~il~~~~p~~--gH~~p~l~la~~La~rGh~VT~~t~ 44 (336)
.+|+++.-++- |. =+.+||.|+++|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEc
Confidence 47888876553 22 36889999999999999854
No 271
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=20.34 E-value=1.5e+02 Score=24.58 Aligned_cols=40 Identities=10% Similarity=0.089 Sum_probs=27.7
Q ss_pred HHHHhhhh--cCCcEEEEcCCCc----------chHHHHHHcCCceEEEecc
Q 019759 103 PLTNFLQD--SRVNWIIHDFISH----------WLPPVAAQLGVNSVFFSIY 142 (336)
Q Consensus 103 ~~~~ll~~--~~~D~vv~D~~~~----------~~~~vA~~~~iP~v~~~~~ 142 (336)
.+.+.+++ .++|+||+|.-.. ...++|+.++.|+|.+...
T Consensus 115 ~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~ 166 (251)
T 3fgn_A 115 QIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTA 166 (251)
T ss_dssp HHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcC
Confidence 34444443 3689999997321 2358999999999987654
No 272
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=20.31 E-value=1.4e+02 Score=22.49 Aligned_cols=35 Identities=9% Similarity=-0.008 Sum_probs=22.0
Q ss_pred eEEEEEcCCCccch-HHHHHHHHHHHhCCCeEEEEe
Q 019759 9 LHIAMFPWLAYGHI-MPFFQVAMFLAEKGHHVSYIS 43 (336)
Q Consensus 9 ~~il~~~~p~~gH~-~p~l~la~~La~rGh~VT~~t 43 (336)
..|++++..+.+.. .....+++.|+++|++|..+.
T Consensus 5 p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d 40 (192)
T 1uxo_A 5 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILN 40 (192)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEec
Confidence 45777775544433 233345567989999887654
Done!