BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019762
(336 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
PE=1 SV=1
Length = 431
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/289 (77%), Positives = 247/289 (85%), Gaps = 20/289 (6%)
Query: 60 NDNGRAE------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRS 113
ND G A W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S
Sbjct: 140 NDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 199
Query: 114 RDVLAKYSAV---ANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDL 170
+ V+AKYSA+ A G V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++
Sbjct: 200 QHVVAKYSALGAAAQGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEI 259
Query: 171 EQSLQSLTG--------ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 222
EQSLQSLTG ATMSDD+++QV+SD N FDG LD +GFGPL+PTESERSLM
Sbjct: 260 EQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGLD---VLGFGPLIPTESERSLM 316
Query: 223 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEED 282
ERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPTEED
Sbjct: 317 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEED 376
Query: 283 KARLVQETGLQLKQINNWFINQRKRNWHANPSSSTASKSKRKSNAGKSS 331
KARLVQETGLQLKQINNWFINQRKRNWH+NPSSST K+KRKSNAG +S
Sbjct: 377 KARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRKSNAGDNS 425
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
PE=2 SV=3
Length = 393
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/279 (77%), Positives = 246/279 (88%), Gaps = 14/279 (5%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
AE W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYS +
Sbjct: 115 AERWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLE 174
Query: 125 NGRVL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG-- 179
+ L DDKELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQS TG
Sbjct: 175 AAQGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVS 234
Query: 180 ------ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 233
ATMS+D+++QV+SD + FDGSLDG +GFGPLVPTESERSLMERVR ELKHEL
Sbjct: 235 PGEGTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHEL 291
Query: 234 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQ 293
KQGYKEKIVDIREEILRKRRAGKLPGDTTS+LK+WW SH+KWPYPTEEDKARLVQETGLQ
Sbjct: 292 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQ 351
Query: 294 LKQINNWFINQRKRNWHANPSSSTASKSKRKSNAGKSSN 332
LKQINNWFINQRKRNWH+NPSSST SK+KR+SNAG++S
Sbjct: 352 LKQINNWFINQRKRNWHSNPSSSTVSKNKRRSNAGENSG 390
>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica
GN=OSH45 PE=2 SV=2
Length = 374
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/266 (80%), Positives = 237/266 (89%), Gaps = 11/266 (4%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+CKAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+A DD
Sbjct: 107 RCKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDD 166
Query: 132 -KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGA--------TM 182
+ELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTGA TM
Sbjct: 167 GRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATM 226
Query: 183 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 242
SD ++DQ DS+ N +D SLDG D+MGFG +PTESERSLMERVR ELKHELKQGYKEK++
Sbjct: 227 SDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLI 284
Query: 243 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 302
DIREEILRKRRAGKLPGDTTS LKAWW SHAKWPYPTEEDKARLVQETGLQLKQINNWFI
Sbjct: 285 DIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 344
Query: 303 NQRKRNWHANPSSSTASKSKRKSNAG 328
NQRKRNWH+NPSSST+ K+KRKSNAG
Sbjct: 345 NQRKRNWHSNPSSSTSVKTKRKSNAG 370
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
Length = 427
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/325 (69%), Positives = 259/325 (79%), Gaps = 26/325 (8%)
Query: 26 WLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNG------------------RAED 67
WL+ + R H+N+ D +DD A + + S+D+ +
Sbjct: 102 WLSQSHRPILHRNHSDVNDDVTVAGDSMIAAALSHDSADLKPDSILNKNEGGGGDGGVMN 161
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
W+ + KAEI+ HPLYE LLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYSA+ NG
Sbjct: 162 WQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNGM 221
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG-------- 179
V DDKELDQFM +YVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTG
Sbjct: 222 VGDDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTS 281
Query: 180 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 239
ATMSDD++DQVDSD N FD ++G DSMGFGPL+PTESERSLMERVR ELKHELKQGYKE
Sbjct: 282 ATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKE 341
Query: 240 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINN 299
KIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPTEEDKARLVQETGLQLKQINN
Sbjct: 342 KIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINN 401
Query: 300 WFINQRKRNWHANPSSSTASKSKRK 324
WFINQRKRNWH+NPS+ST KSKRK
Sbjct: 402 WFINQRKRNWHSNPSTSTVLKSKRK 426
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
GN=LET12 PE=2 SV=1
Length = 426
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/255 (84%), Positives = 232/255 (90%), Gaps = 9/255 (3%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE KCKA+I+ HPLY+QLLSAHVSCLRIATPVDQLP+IDAQL++S++V+AKYS + G+
Sbjct: 158 WEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ 217
Query: 128 V-LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG------- 179
LDDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTG
Sbjct: 218 PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGT 277
Query: 180 -ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 238
ATMSDDD+DQ DSDTNF DG DGPDSMGFGPLVPTESERSLMERVR ELKHELKQGYK
Sbjct: 278 GATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYK 337
Query: 239 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQIN 298
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPTEEDKARLVQETGLQLKQIN
Sbjct: 338 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQIN 397
Query: 299 NWFINQRKRNWHANP 313
NWFINQRKRNWH+NP
Sbjct: 398 NWFINQRKRNWHSNP 412
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
PE=1 SV=2
Length = 383
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/276 (70%), Positives = 228/276 (82%), Gaps = 12/276 (4%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
EDW + KA I+ HP+YEQLL+AHV+CLR+ATPVDQ+P+IDAQLS+ V AKYS +
Sbjct: 110 GEDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTL- 168
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGA---- 180
G V+D+KELD FM+HYV+LL SFKEQLQ HV VHAMEA+ ACW++EQSLQSLTG
Sbjct: 169 -GVVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSE 227
Query: 181 ----TMSDDDED-QVDSDTNFFDGSLDGPDS-MGFGPLVPTESERSLMERVRHELKHELK 234
TMSDD++D QV+S+ N FDGSLDG D MGFGPLVPTE ERSLMERV+ ELKHELK
Sbjct: 228 SNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELK 287
Query: 235 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQL 294
QG+KEKIVDIREEI+RKRRAGKLPGDTTS+LK WW +H+KWPYPTEEDKA+LVQETGLQL
Sbjct: 288 QGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQL 347
Query: 295 KQINNWFINQRKRNWHANPSSSTASKSKRKSNAGKS 330
KQINNWFINQRKRNW++N S+S+ ++ GKS
Sbjct: 348 KQINNWFINQRKRNWNSNSSTSSTLTKNKRKRTGKS 383
>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica
GN=HOS58 PE=2 SV=2
Length = 313
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/269 (71%), Positives = 218/269 (81%), Gaps = 10/269 (3%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-K 132
KA + HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA SA A +
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGGE 102
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGA--------TMSD 184
ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTGA TMSD
Sbjct: 103 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSD 162
Query: 185 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 244
D+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVRHELK+ELKQGYKEK+VDI
Sbjct: 163 DEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDI 221
Query: 245 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQ 304
REEILRKRRAGKLPGDT S+LKAWW +H+KWPYPTE+DKARLVQETGLQLKQINNWFINQ
Sbjct: 222 REEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQ 281
Query: 305 RKRNWHANPSSSTASKSKRKSNAGKSSNE 333
RKRNWH+NP+SS K+++ G E
Sbjct: 282 RKRNWHSNPASSGEKTKKKRNVTGDGGAE 310
>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica
GN=HOS59 PE=2 SV=2
Length = 323
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/254 (73%), Positives = 210/254 (82%), Gaps = 14/254 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-- 131
KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA +A A
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAP 107
Query: 132 ---KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGA-------- 180
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTGA
Sbjct: 108 SGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGA 167
Query: 181 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 240
TMSDD+++QVDS++N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELKHELKQGY+EK
Sbjct: 168 TMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREK 226
Query: 241 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNW 300
+VDIREEILRKRRAGKLPGDT S LKAWW +H+KWPYPTEEDKARLVQETGLQLKQINNW
Sbjct: 227 LVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNW 286
Query: 301 FINQRKRNWHANPS 314
FINQRKRNWH+NP+
Sbjct: 287 FINQRKRNWHSNPA 300
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
PE=2 SV=1
Length = 291
Score = 347 bits (889), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 169/263 (64%), Positives = 205/263 (77%), Gaps = 10/263 (3%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ K EI HP+YEQLL+AHV+CLR+ATP+DQLP I+AQLS+S +L Y++ A G D
Sbjct: 28 QLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDR 87
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGATMSD------- 184
ELD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTGAT+ +
Sbjct: 88 HELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMS 147
Query: 185 DDEDQVDSDTNFFDGSLD---GPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 241
+DED + D + + +D G D GFGPL+PTESERSLMERVR ELK ELKQG+K +I
Sbjct: 148 EDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRI 207
Query: 242 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWF 301
D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPTE+DKA+LV+ETGLQLKQINNWF
Sbjct: 208 EDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWF 267
Query: 302 INQRKRNWHANPSSSTASKSKRK 324
INQRKRNWH N S T+ KSKRK
Sbjct: 268 INQRKRNWHNNSHSLTSLKSKRK 290
>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
Length = 294
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/263 (65%), Positives = 207/263 (78%), Gaps = 13/263 (4%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK- 132
K EI HP+Y+QLL+AHV+CLR+ATP+DQLP I+AQLS S +L Y++ A G D+
Sbjct: 32 KGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVGFSHHDRQ 91
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGAT--------MSD 184
ELD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTGAT MS+
Sbjct: 92 ELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSE 151
Query: 185 DDED-QVD--SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 241
D++D Q+D SD + D S G D GFGPL+PTESERSLMERVR ELK ELKQG+K +I
Sbjct: 152 DEDDLQMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRI 210
Query: 242 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWF 301
D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPTE+DKA+LV+ETGLQLKQINNWF
Sbjct: 211 EDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWF 270
Query: 302 INQRKRNWHANPSSSTASKSKRK 324
INQRKRNWH N S T+ KSKRK
Sbjct: 271 INQRKRNWHNNSHSLTSLKSKRK 293
>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica
GN=HOS66 PE=2 SV=1
Length = 314
Score = 335 bits (859), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/261 (64%), Positives = 201/261 (77%), Gaps = 11/261 (4%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DD 131
K EI HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+A + D
Sbjct: 54 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 113
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGAT--------MS 183
+ELD F+ Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTGAT MS
Sbjct: 114 QELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 173
Query: 184 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 243
+D+++ D DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I D
Sbjct: 174 EDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIED 233
Query: 244 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFIN 303
+REEILRKRRAGKLPGDTT++LK WW H+KWPYPTE+DKA+LV+ETGLQLKQINNWFIN
Sbjct: 234 VREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFIN 293
Query: 304 QRKRNWHANPSSSTASKSKRK 324
QRKRNWH N +ST KSKRK
Sbjct: 294 QRKRNWHNNSQTSTL-KSKRK 313
>sp|P56660|KNOX2_MAIZE Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2
PE=2 SV=1
Length = 88
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 83/88 (94%)
Query: 225 VRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKA 284
VR ELKHELKQGY++K+VDIREEILRKRRAGKLPGDT S LKAWW +H+KWPYPTEEDKA
Sbjct: 1 VRQELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKA 60
Query: 285 RLVQETGLQLKQINNWFINQRKRNWHAN 312
RLVQETGLQLKQINNWFINQRKRNWH N
Sbjct: 61 RLVQETGLQLKQINNWFINQRKRNWHNN 88
>sp|P56665|KNOX7_MAIZE Homeobox protein knotted-1-like 7 (Fragment) OS=Zea mays GN=KNOX7
PE=2 SV=1
Length = 85
Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 75/85 (88%), Positives = 83/85 (97%)
Query: 228 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 287
ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPTE+DKARLV
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60
Query: 288 QETGLQLKQINNWFINQRKRNWHAN 312
QETGLQLKQINNWFINQRKRNWH+N
Sbjct: 61 QETGLQLKQINNWFINQRKRNWHSN 85
>sp|P56664|KNOX6_MAIZE Homeobox protein knotted-1-like 6 (Fragment) OS=Zea mays GN=KNOX6
PE=2 SV=1
Length = 85
Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 75/85 (88%), Positives = 83/85 (97%)
Query: 228 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 287
ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPTE+DKARLV
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60
Query: 288 QETGLQLKQINNWFINQRKRNWHAN 312
QETGLQLKQINNWFINQRKRNWH+N
Sbjct: 61 QETGLQLKQINNWFINQRKRNWHSN 85
>sp|P56659|KNOX1_MAIZE Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1
PE=2 SV=1
Length = 88
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 80/88 (90%)
Query: 225 VRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKA 284
VR ELK ELKQG+K +I D+REEILRKRRAGKLPGDTTS+LK WW H+KWPYPTE+DKA
Sbjct: 1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKA 60
Query: 285 RLVQETGLQLKQINNWFINQRKRNWHAN 312
+LV+ETGLQLKQINNWFINQRKRNWH N
Sbjct: 61 KLVEETGLQLKQINNWFINQRKRNWHNN 88
>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica
GN=OSH43 PE=2 SV=1
Length = 341
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 123/278 (44%), Gaps = 75/278 (26%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KAEI+ HP Y LL+A++ C ++ P D VL K +AV + LD+
Sbjct: 83 VKAEIMSHPQYSALLAAYLGCKKVGAPPD--------------VLTKLTAVPAAQQLDEA 128
Query: 133 -----------------ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
+LDQFM Y +L ++E+L++ + +EA +E L
Sbjct: 129 DGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRVETQLD 184
Query: 176 SLT-----GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELK 230
SL G S++++D D +LK
Sbjct: 185 SLAESNCEGTGSSEEEQDPSDK-----------------------------------QLK 209
Query: 231 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQET 290
H+L + Y + D+R+ ++ + GKLP + L WW H KWPYP+E +K L Q T
Sbjct: 210 HQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPSEMEKMTLAQTT 269
Query: 291 GLQLKQINNWFINQRKRNWHANPSSSTASKSKRKSNAG 328
GL KQINNWFINQRKR+W P + TA + + G
Sbjct: 270 GLDQKQINNWFINQRKRHWKPTPVAGTAFPTMEAAGGG 307
>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica
GN=OSH6 PE=2 SV=1
Length = 301
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 127/251 (50%), Gaps = 40/251 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLDDK 132
KA+I GHP Y LLSA++ C ++ P P++ + L R+ A G++ D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEVASLLKEIGRERRAGGGGGGAGQIGVDP 99
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL---------TGATMS 183
ELD+FM Y +L +KE+L + EA ++ L +L T AT S
Sbjct: 100 ELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGATSPPATTATHS 155
Query: 184 DD-----DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 238
D+ DEDQ +T+ D + E L + HELK L + Y
Sbjct: 156 DEMVGSSDEDQCSGETDMLD--------------IGQEQSSRLAD---HELKEMLLKKYS 198
Query: 239 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQIN 298
+ +R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL TGL KQIN
Sbjct: 199 GCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQIN 258
Query: 299 NWFINQRKRNW 309
NWFINQRKR+W
Sbjct: 259 NWFINQRKRHW 269
>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica
GN=OSH71 PE=2 SV=1
Length = 311
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 116/241 (48%), Gaps = 23/241 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--D 131
KA+I GHP Y LLSA++ C ++ P P++ L A D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGAT---MSDDDED 188
ELD+FM Y +L +KE+L + EA + L SL G + DE
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPPTDNSDEM 167
Query: 189 QVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEI 248
S+ G D D FG E L + HELK L + Y + +R E
Sbjct: 168 VGSSEDEPCSGDADAAD---FG----QEHSSRLAD---HELKEMLLKKYSGCLSRLRSEF 217
Query: 249 LRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRN 308
L+KR+ GKLP D S L WW +H +WPYPTEEDK RL TGL KQINNWFINQRKR+
Sbjct: 218 LKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRH 277
Query: 309 W 309
W
Sbjct: 278 W 278
>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica
GN=OSH71 PE=2 SV=2
Length = 311
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 116/241 (48%), Gaps = 23/241 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--D 131
KA+I GHP Y LLSA++ C ++ P P++ L A D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGAT---MSDDDED 188
ELD+FM Y +L +KE+L + EA + L SL G + DE
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPPTDNSDEM 167
Query: 189 QVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEI 248
S+ G D D FG E L + HELK L + Y + +R E
Sbjct: 168 VGSSEDEPCSGDADAAD---FG----QEHSSRLAD---HELKEMLLKKYSGCLSRLRSEF 217
Query: 249 LRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRN 308
L+KR+ GKLP D S L WW +H +WPYPTEEDK RL TGL KQINNWFINQRKR+
Sbjct: 218 LKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRH 277
Query: 309 W 309
W
Sbjct: 278 W 278
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
Length = 359
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 138/264 (52%), Gaps = 35/264 (13%)
Query: 54 KNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR- 112
K S+ + A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+
Sbjct: 87 KAKEPSSSSPYAGDVEAIKAK--IISHPHYYSLLTAYLECNKVGAP----PEVSARLTEI 140
Query: 113 SRDVLAKY-SAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLE 171
+++V A+ +A+ + ELDQFM Y +L F+E+L + ++ AME +
Sbjct: 141 AQEVEARQRTALGGLAAATEPELDQFMEAYHEMLVKFREELTRPLQ-EAMEFMRRVESQL 199
Query: 172 QSLQSLTGATM------SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERV 225
SL S++G ++ +EDQ S G + P+ G V
Sbjct: 200 NSL-SISGRSLRNILSSGSSEEDQEGSG-----GETELPEVDAHG--------------V 239
Query: 226 RHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKAR 285
ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+E K
Sbjct: 240 DQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPSETQKVA 299
Query: 286 LVQETGLQLKQINNWFINQRKRNW 309
L + TGL LKQINNWFINQRKR+W
Sbjct: 300 LAESTGLDLKQINNWFINQRKRHW 323
>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1
Length = 364
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 140/273 (51%), Gaps = 42/273 (15%)
Query: 47 EEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI 106
E K K S+S+ A D E +K K I+ HP Y LL+A++ C ++ P P++
Sbjct: 87 EACAKAAKEPSSSS---YAADVEAIKAK--IISHPHYSSLLAAYLDCQKVGAP----PEV 137
Query: 107 DAQLSR-SRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV 164
A+L+ ++D+ L + +A+ + ELDQFM Y +L ++E+L + ++ EA+
Sbjct: 138 SARLTAVAQDLELRQRTALGGLGTATEPELDQFMEAYHEMLVKYREELTRPLQ----EAM 193
Query: 165 MACWDLEQSLQSLTGATMS--------DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTE 216
+E L SL+ + S +EDQ S G + P+ G
Sbjct: 194 EFLRRVETQLNSLSISGRSLRNILSTGSSEEDQEGSG-----GETELPEIDAHG------ 242
Query: 217 SERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWP 276
V ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWP
Sbjct: 243 --------VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWP 294
Query: 277 YPTEEDKARLVQETGLQLKQINNWFINQRKRNW 309
YP+E K L + TGL LKQINNWFINQRKR+W
Sbjct: 295 YPSESQKVALAESTGLDLKQINNWFINQRKRHW 327
>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica
GN=OSH10 PE=2 SV=1
Length = 337
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 125/256 (48%), Gaps = 39/256 (15%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
ET KA+I+ HPLY LL A + C ++ P P++ +LS + + + A R
Sbjct: 58 ETDAIKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSA---LAGELDSRAEDRY 110
Query: 129 L----DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT------ 178
L D ELD+FM Y+ +L S++++L + ++ EA ++E + S T
Sbjct: 111 LQGQSSDPELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFTLDDNGS 166
Query: 179 -GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 237
G S+D+++ D S G + +E ELK L Y
Sbjct: 167 EGGNSSEDEQEAGGGDMA----------SAGLPEITSPCAED-------KELKSHLLNKY 209
Query: 238 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQI 297
+ + E+ +K++ GKLP D L WW H +WPYP+E +KA L + TGL KQI
Sbjct: 210 SGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQI 269
Query: 298 NNWFINQRKRNWHANP 313
NNWFINQRKR+W P
Sbjct: 270 NNWFINQRKRHWKPTP 285
>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1
PE=1 SV=1
Length = 398
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 127/248 (51%), Gaps = 34/248 (13%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C +I P D + +I A Q +R + S A+ R D
Sbjct: 135 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSR---D 191
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLTGAT-- 181
ELDQFM Y +L ++E+L + ++ AME + M C L + G +
Sbjct: 192 PELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIRRIESQLSMLCQSPIHILNNPDGKSDN 250
Query: 182 MSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 241
M DE+Q N G + P+ + P +R ELK+ L + Y +
Sbjct: 251 MGSSDEEQ----ENNSGGETELPE------IDPRAEDR--------ELKNHLLKKYSGYL 292
Query: 242 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWF 301
+++E+ +K++ GKLP + L WW H KWPYP+E +K L + TGL KQINNWF
Sbjct: 293 SSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWF 352
Query: 302 INQRKRNW 309
INQRKR+W
Sbjct: 353 INQRKRHW 360
>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp.
japonica GN=Os03g0673500 PE=3 SV=1
Length = 337
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 119/251 (47%), Gaps = 35/251 (13%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--- 130
KA+I+ HPLY LL A V C ++ P P++ +LS S V+ + R L
Sbjct: 72 KAKIMSHPLYPSLLRAFVDCKKVGAP----PEVVGRLS-SLAVVTDVPQYSGDRCLPAQQ 126
Query: 131 ---DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGATMSDDDE 187
D ELDQFM Y +L + ++L + ++ + E+ + + E
Sbjct: 127 PAADPELDQFMETYCYMLTRYGQELARPIQ-----------EAEEFFRGI---------E 166
Query: 188 DQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREE 247
+Q+DS D S D D + G +P +S V + L Y + + E
Sbjct: 167 EQIDSLALDEDVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKYSGYLNSLWTE 224
Query: 248 ILRKRR--AGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQR 305
I K++ G LP D L WW H +WPYP+E +KA L + TGL KQ+ NWFINQR
Sbjct: 225 ISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQR 284
Query: 306 KRNWHANPSSS 316
KR+W P+++
Sbjct: 285 KRHWKPKPAAA 295
>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1
Length = 355
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 138/269 (51%), Gaps = 32/269 (11%)
Query: 51 KNNKNNSASNDNGRAEDWETVKC-KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQ 109
+N+ ++S G A E ++ KA+I+ HP LL A++ C ++ P P++ A+
Sbjct: 71 RNHHHDSTETSGGGAGAGEVIEALKAKIIAHPQCSNLLDAYMDCQKVGAP----PEVAAR 126
Query: 110 LSRSRDVLA--KYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMAC 167
LS R + ++ + V D ELDQFM Y +L ++E+L + ++ EA+
Sbjct: 127 LSAVRQEFEARQRRSLTDRDVSKDPELDQFMEAYYDMLVKYREELTRPLQ----EAMEFM 182
Query: 168 WDLEQSLQSLTGATM----SDDDEDQVDS---DTNFFDGSLDGPDSMGFGPLVPTESERS 220
+E L L A + S+D + V S D + G + P+ + P +R
Sbjct: 183 QKIEAQLNMLGNAPVRIFNSEDKCEGVGSSEEDQDNSGGETELPE------IDPRAEDR- 235
Query: 221 LMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTE 280
ELK+ L + Y + +++E+ +K++ GKLP D L WW H KWPYP+E
Sbjct: 236 -------ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHYKWPYPSE 288
Query: 281 EDKARLVQETGLQLKQINNWFINQRKRNW 309
+K L + TGL KQINNWFINQRKR+W
Sbjct: 289 SEKVALAESTGLDQKQINNWFINQRKRHW 317
>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1
Length = 398
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 128/256 (50%), Gaps = 20/256 (7%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND+ E KA+I+ HP Y L+ A++ C R+ P D +P++ ++R +
Sbjct: 120 NDDHSLSSNEVEAIKAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLS--VARQEFEARQ 177
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
S+ + D ELDQFM Y +L ++E+L + ++ EA+ +E L L
Sbjct: 178 RSSGTSRETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGN 233
Query: 180 AT------MSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 233
+ ED+ + S D ++ G VP R+ ELK+ L
Sbjct: 234 NNNAPPLRIFSPSEDKCEG----IGSSEDEQENSGGETEVPEIDPRA----EDRELKNHL 285
Query: 234 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQ 293
+ Y + +++E+ +K++ GKLP + L +WW H KWPYP+E +K L + TGL
Sbjct: 286 LRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVALAESTGLD 345
Query: 294 LKQINNWFINQRKRNW 309
KQINNWFINQRKR+W
Sbjct: 346 QKQINNWFINQRKRHW 361
>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica
GN=OSH1 PE=2 SV=2
Length = 361
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 131/245 (53%), Gaps = 33/245 (13%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDV-LAKYSAVANGRVLD 130
KA+I+ HP Y LL+A++ C ++ P P++ A+L+ ++D+ L + +A+
Sbjct: 104 IKAKIISHPHYSSLLAAYLDCQKVGAP----PEVAARLTAVAQDLELRQRTALGVLGAAT 159
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGATM------SD 184
+ ELDQFM Y +L ++E+L + ++ AME + + + + S++G ++
Sbjct: 160 EPELDQFMEAYHEMLVKYREELTRPLQ-EAMEFLRRV-ETQLNTLSISGRSLRNILSSGS 217
Query: 185 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 244
+EDQ S G + P+ G V ELKH L + Y + +
Sbjct: 218 SEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYLSSL 258
Query: 245 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQ 304
++E+ +K++ GKLP D L WW H KWPYP+E K L + TGL LKQINNWFINQ
Sbjct: 259 KQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQ 318
Query: 305 RKRNW 309
RKR+W
Sbjct: 319 RKRHW 323
>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1
Length = 397
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 127/256 (49%), Gaps = 20/256 (7%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND+ E KA+I+ HP Y LL A++ C R+ P D + ++ ++R +
Sbjct: 119 NDDHSLSSNEVEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLS--VARQEFEARQ 176
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
S+ + D ELDQFM Y +L ++E+L + ++ EA+ +E L L
Sbjct: 177 RSSGTSRETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGN 232
Query: 180 AT------MSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 233
+ ED+ + S + ++ G VP R+ ELK+ L
Sbjct: 233 NNNAPPLRIFSPSEDKCEG----IGSSEEEQENSGGETEVPEIDPRA----EDRELKNHL 284
Query: 234 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQ 293
+ Y + +++E+ +K++ GKLP D L +WW H KWPYP+E +K L + TGL
Sbjct: 285 LRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLD 344
Query: 294 LKQINNWFINQRKRNW 309
KQINNWFINQRKR+W
Sbjct: 345 QKQINNWFINQRKRHW 360
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 128/236 (54%), Gaps = 18/236 (7%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL+A+V+C ++ P + + +++ + + + +A + + +D
Sbjct: 125 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGEDPA 184
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGATMSDDDEDQVDSD 193
LDQFM Y +L ++++L + ++ EA++ +E ++LT S D D
Sbjct: 185 LDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLT--ISSSDFASNEGGD 238
Query: 194 TNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRR 253
N GS + + + ++ ++E +LK +L + Y + +++E ++KR+
Sbjct: 239 RN---GSSE--EDVDLHNMIDPQAED-------RDLKGQLLRKYSGYLGSLKQEFMKKRK 286
Query: 254 AGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 309
GKLP + L WW H KWPYP+E K L + TGL KQINNWFINQRKR+W
Sbjct: 287 KGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHW 342
>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6
PE=1 SV=1
Length = 327
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 113/236 (47%), Gaps = 16/236 (6%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y +LL A++ C ++ P ++ + ++ R DV K V + D E
Sbjct: 86 KAKIACHPSYPRLLQAYIDCQKVGAP-PEIACLLEEIQRESDVY-KQEVVPSSCFGADPE 143
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGATMSDDDEDQVDSD 193
LD+FM Y +L +K L + EA +E L++L S +
Sbjct: 144 LDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSE---- 195
Query: 194 TNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRR 253
DG + + + G E R E +LK L + + +I ++ E +K++
Sbjct: 196 ----DGVISSDEELSGGDHEVAEDGRQRCED--RDLKDRLLRKFGSRISTLKLEFSKKKK 249
Query: 254 AGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 309
GKLP + L WW H KWPYPTE DK L TGL KQINNWFINQRKR+W
Sbjct: 250 KGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHW 305
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum
GN=LET6 PE=2 SV=1
Length = 355
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 125/245 (51%), Gaps = 40/245 (16%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
+ HP Y +LL+A+++C +I P + + +++ + S + S+ G + +D LDQF
Sbjct: 101 MAHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQF 160
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGATMSDDD----------- 186
M Y +L ++++L + + EA++ +E ++LT A S +
Sbjct: 161 MEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALTLAPNSSHESALGEAMDRNG 216
Query: 187 --EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 244
+++VD + +F D P +R ELK +L + Y + +
Sbjct: 217 SSDEEVDVNNSFID---------------PQAEDR--------ELKGQLLRKYSGYLGSL 253
Query: 245 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQ 304
++E ++KR+ GKLP + L WWL H KWPYP+E K L + TGL KQINNWFINQ
Sbjct: 254 KQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAESTGLDQKQINNWFINQ 313
Query: 305 RKRNW 309
RKR+W
Sbjct: 314 RKRHW 318
>sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2
PE=1 SV=3
Length = 310
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 120/247 (48%), Gaps = 38/247 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRS-----RDV--LAKYSAVANG 126
K++I HPLY +LL ++ C ++ P+ ++ I ++ R RDV L+ + A
Sbjct: 70 KSKIASHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQRENHVYKRDVAPLSCFGA---- 124
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGATMSD-- 184
D ELD+FM Y +L +K L + EA +E LQ+L S
Sbjct: 125 ----DPELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCTGPASATA 176
Query: 185 -DDEDQVDSDTNFF-DGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 242
D+ V SD D + DS +RS +LK +L + + I
Sbjct: 177 LSDDGAVSSDEELREDDDIAADDS----------QQRS----NDRDLKDQLLRKFGSHIS 222
Query: 243 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 302
++ E +K++ GKLP + L WW H KWPYPTE DK L +ETGL KQINNWFI
Sbjct: 223 SLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFI 282
Query: 303 NQRKRNW 309
NQRKR+W
Sbjct: 283 NQRKRHW 289
>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1
Length = 351
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 122/239 (51%), Gaps = 27/239 (11%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR-VLDDKELDQ 136
V HP Y LL+A++ C ++ P D L ++ A + AK A A GR D ELDQ
Sbjct: 95 VAHPQYSALLAAYLDCQKVGAPPDVLERLTA-------MAAKLDASAAGRHEPRDPELDQ 147
Query: 137 FMTHYVLLLYSFKEQLQQHV--RVHAMEAVMACWDLEQSLQSLTGA--TMSDDDEDQVDS 192
FM Y +L ++E+L + + + ++ V A D + A +++D + V S
Sbjct: 148 FMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLSLADGKSEGVGS 207
Query: 193 DTNFFD--GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILR 250
+ D G + P P + +E ELK++L + Y + +R+E +
Sbjct: 208 SEDDMDPNGRENDP------PEIDPRAEDK-------ELKYQLLKKYSGYLSSLRQEFSK 254
Query: 251 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 309
K++ GKLP + L WW H KWPYP+E +K L + TGL KQINNWFINQRKR+W
Sbjct: 255 KKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 313
>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM
PE=1 SV=2
Length = 382
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 128/253 (50%), Gaps = 48/253 (18%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN--GRVLDD 131
KA+I+ HP Y +LL+A+V+C ++ P P++ A+L + A +A G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 177
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT----------GAT 181
LDQFM Y +L ++++L + + EA++ +E +SL+ G T
Sbjct: 178 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 233
Query: 182 MSD-----DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 236
D E++VD + F D P +R ELK +L +
Sbjct: 234 AIDRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRK 270
Query: 237 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQ 296
Y + +++E ++KR+ GKLP + L WW H KWPYP+E+ K L + TGL KQ
Sbjct: 271 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQ 330
Query: 297 INNWFINQRKRNW 309
INNWFINQRKR+W
Sbjct: 331 INNWFINQRKRHW 343
>sp|Q10EC6|KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica
GN=Os03g0772100 PE=2 SV=2
Length = 347
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 114/269 (42%), Gaps = 55/269 (20%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA------QLSRSRDVLAKYSAVANGR 127
KAEI+ HP Y LL+A++ C ++ P D L K+ A QL + +
Sbjct: 82 KAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRDD 141
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGATMSDDDE 187
+ D +LDQFM HA E GA +D
Sbjct: 142 DVPDHQLDQFM--------------------HADEVQ-------------GGAGAADPGS 168
Query: 188 DQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSL-------MERVRHELKHELKQGYKEK 240
V + D + +G S +E E+ ++ +LKH+L Y
Sbjct: 169 RGVLQLDSIADSNCEGTGS--------SEEEQDTSCPEAEEIDPSDKQLKHQLLMKYGGS 220
Query: 241 IVDIREEILRKRRAGKLPGDTTSLLKAWW-LSHAKWPYPTEEDKARLVQETGLQLKQINN 299
+ D+R+ ++ + GKLP + L WW L + KWPYP+E +K L Q TGL KQI+N
Sbjct: 221 LGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISN 280
Query: 300 WFINQRKRNWHANPSSSTASKSKRKSNAG 328
WFINQRKR+W P + + + G
Sbjct: 281 WFINQRKRHWKPTPVAGMTFPTVEAAGGG 309
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
PE=2 SV=1
Length = 383
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 122/252 (48%), Gaps = 39/252 (15%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN--GR 127
++ KA+I+ HP Y +LL A+V+C ++ P P++ A+L + A +A G
Sbjct: 120 SLLVKAKIMAHPHYHRLLLAYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPTGS 175
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQ----------QHVRVHAMEAVMACWDLEQSLQSL 177
+ +D LDQFM Y +L ++++L QHV ++ ++
Sbjct: 176 LGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAA 235
Query: 178 TGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 237
+ E++VD + F D P +R ELK +L + Y
Sbjct: 236 IERNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRKY 272
Query: 238 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQI 297
+ +++E ++KR+ GKLP + L WW H KWPYP+E+ K L + TGL KQI
Sbjct: 273 SGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQI 332
Query: 298 NNWFINQRKRNW 309
NNWFINQRKR+W
Sbjct: 333 NNWFINQRKRHW 344
>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica
GN=OSH15 PE=2 SV=1
Length = 355
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 118/246 (47%), Gaps = 20/246 (8%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL+A++ C ++ P + L ++ A AK A GR
Sbjct: 87 EAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH 139
Query: 129 -LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGATMSDDDE 187
D ELDQFM Y +L ++E+L + + EA+ +E L ++ G
Sbjct: 140 DARDPELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIAGGAHGGGAG 195
Query: 188 DQ----VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 243
D + S D D G P R+ ELK +L + Y +
Sbjct: 196 SARLLLADGKSECVGSSEDDMDPSGRENEPPEIDPRA----EDKELKFQLLKKYSGYLSS 251
Query: 244 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFIN 303
+R+E +K++ GKLP + L WW H KWPYP+E +K L + TGL KQINNWFIN
Sbjct: 252 LRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFIN 311
Query: 304 QRKRNW 309
QRKR+W
Sbjct: 312 QRKRHW 317
>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica
GN=OSH15 PE=2 SV=2
Length = 355
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 118/246 (47%), Gaps = 20/246 (8%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL+A++ C ++ P + L ++ A AK A GR
Sbjct: 87 EAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH 139
Query: 129 -LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGATMSDDDE 187
D ELDQFM Y +L ++E+L + + EA+ +E L ++ G
Sbjct: 140 DARDPELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIAGGAHGGGAG 195
Query: 188 DQ----VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 243
D + S D D G P R+ ELK +L + Y +
Sbjct: 196 SARLLLADGKSECVGSSEDDMDPSGRENEPPEIDPRA----EDKELKFQLLKKYSGYLSS 251
Query: 244 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFIN 303
+R+E +K++ GKLP + L WW H KWPYP+E +K L + TGL KQINNWFIN
Sbjct: 252 LRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFIN 311
Query: 304 QRKRNW 309
QRKR+W
Sbjct: 312 QRKRHW 317
>sp|P56667|KNX10_MAIZE Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10
PE=3 SV=1
Length = 88
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 228 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 287
+LK+ L Y + + E+ RK++ GKLP D L WW H +WPYP+E +KA L
Sbjct: 4 DLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALA 63
Query: 288 QETGLQLKQINNWFINQRKRNW 309
+ TGL+ KQINNWFINQRKR+W
Sbjct: 64 ESTGLEAKQINNWFINQRKRHW 85
>sp|P56668|KNX11_MAIZE Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11
PE=3 SV=1
Length = 88
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 56/82 (68%)
Query: 228 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 287
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL
Sbjct: 4 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLA 63
Query: 288 QETGLQLKQINNWFINQRKRNW 309
TGL KQINNWFINQRKR+W
Sbjct: 64 AATGLDPKQINNWFINQRKRHW 85
>sp|P56663|KNOX5_MAIZE Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5
PE=2 SV=1
Length = 85
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 56/82 (68%)
Query: 228 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 287
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLA 60
Query: 288 QETGLQLKQINNWFINQRKRNW 309
TGL KQINNWFINQRKR+W
Sbjct: 61 AMTGLDPKQINNWFINQRKRHW 82
>sp|P56669|HLG3_MAIZE Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3
SV=1
Length = 85
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%)
Query: 228 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 287
ELK L + Y + +R E L+KR+ GKLP D ++L WW +H +WPYPTEEDK RL
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEEDKVRLA 60
Query: 288 QETGLQLKQINNWFINQRKRNW 309
TGL KQINNWFINQRKR+W
Sbjct: 61 AMTGLDPKQINNWFINQRKRHW 82
>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica
GN=OSH3 PE=2 SV=1
Length = 365
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 115/247 (46%), Gaps = 23/247 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL-DDK 132
KA IV HP Y +LL+A + C ++ P + +I A +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPEDP 133
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQS------LTGATMSDDD 186
ELDQFM Y LL KE+L + ++ EA +E L S LT
Sbjct: 134 ELDQFMEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSINSGPPLTALISESKA 189
Query: 187 EDQVDSDTNFFDGS----LDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 242
D DGS ++ + G + P +++L K L + Y +
Sbjct: 190 GLDSSDDDEHEDGSGMEMMEAAEDEDLGIIDPRSDDKAL--------KRHLLRKYSGYLG 241
Query: 243 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 302
+R+E+ +KR+ GKLP + L WW H +WP P+E +K L + TGL+ KQINN FI
Sbjct: 242 GLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQINNCFI 301
Query: 303 NQRKRNW 309
NQRKR+W
Sbjct: 302 NQRKRHW 308
>sp|Q54VB4|HBX9_DICDI Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1
Length = 639
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 236 GYKEKIVDI--REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQ 293
G E ++ + I+++++ GKLPG+ TS+LK W H PYPTEE+K L T L
Sbjct: 543 GNNENVIGVPFTGSIVKRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLS 602
Query: 294 LKQINNWFINQRKR 307
QINNWF N R+R
Sbjct: 603 FNQINNWFTNARRR 616
>sp|P56666|KNOX8_MAIZE Homeobox protein knotted-1-like 8 (Fragment) OS=Zea mays GN=KNOX8
PE=2 SV=1
Length = 85
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 228 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 287
ELKH+L + Y + +R+E ++++ GKLP + L WW H KWPYP+E +K L
Sbjct: 1 ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALA 60
Query: 288 QETGLQLKQINNWFINQRKRNW 309
+ TGL KQINNWFINQRKR+W
Sbjct: 61 ETTGLDPKQINNWFINQRKRHW 82
>sp|P56661|KNOX3_MAIZE Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3
PE=2 SV=1
Length = 88
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 228 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 287
ELK +L + Y + ++R+E+ +KR+ KLP + L +WW H +WPYP+E +K L
Sbjct: 4 ELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALA 63
Query: 288 QETGLQLKQINNWFINQRKRNW 309
+ TGL+ KQINNWFINQRKR+W
Sbjct: 64 ESTGLEQKQINNWFINQRKRHW 85
>sp|P56662|KNOX4_MAIZE Homeobox protein knotted-1-like 4 (Fragment) OS=Zea mays GN=KNOX4
PE=2 SV=1
Length = 85
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 228 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 287
ELK++L + Y + +R+E +K++ GKLP + L WW H KWPYP+E +K L
Sbjct: 1 ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALA 60
Query: 288 QETGLQLKQINNWFINQRKRNW 309
+ TGL KQINNWFINQRKR+W
Sbjct: 61 EATGLDQKQINNWFINQRKRHW 82
>sp|A8K0S8|ME3L2_HUMAN Putative homeobox protein Meis3-like 2 OS=Homo sapiens GN=MEIS3P2
PE=2 SV=1
Length = 358
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 243 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 302
D+ +E R ++ G P T++++AW H PYP+EE K +LVQ+TGL + Q+NNWFI
Sbjct: 238 DLDQEPRRNKKRGIFPKVATNIMRAWLFQHLWHPYPSEEQKKQLVQDTGLTILQVNNWFI 297
Query: 303 NQRKR 307
N R+R
Sbjct: 298 NARRR 302
>sp|Q99687|MEIS3_HUMAN Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3
Length = 375
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 243 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 302
D+ +E R ++ G P T++++AW H PYP+EE K +L Q+TGL + Q+NNWFI
Sbjct: 255 DLDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFI 314
Query: 303 NQRKR 307
N R+R
Sbjct: 315 NARRR 319
>sp|A6NDR6|ME3L1_HUMAN Putative homeobox protein Meis3-like 1 OS=Homo sapiens GN=MEIS3P1
PE=5 SV=2
Length = 274
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 243 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 302
D+ +E R ++ G P T++++AW H PYP+EE K +L Q+TGL + Q+NNWFI
Sbjct: 154 DLDQEPRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFI 213
Query: 303 NQRKR 307
N R+R
Sbjct: 214 NARRR 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,971,167
Number of Sequences: 539616
Number of extensions: 6253833
Number of successful extensions: 60982
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 45058
Number of HSP's gapped (non-prelim): 13241
length of query: 336
length of database: 191,569,459
effective HSP length: 118
effective length of query: 218
effective length of database: 127,894,771
effective search space: 27881060078
effective search space used: 27881060078
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)