BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019764
(336 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana
GN=NFYA1 PE=2 SV=1
Length = 272
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 141/293 (48%), Gaps = 64/293 (21%)
Query: 2 MPAKPD-ENRQLDRGAQSVSQSAIYSQRPWWSGTGTG----ASLAEAAAPKSSREQPNGS 56
M +KP EN + +V Q +Y++ PWW G A + + SS + PNGS
Sbjct: 1 MQSKPGRENEEEVNNHHAVQQPMMYAE-PWWKNNSFGVVPQARPSGIPSNSSSLDCPNGS 59
Query: 57 VVNGA-TYSQDG-INGQEHAHLKHIPSSTPLTMGER--LEQNSQM--------------- 97
N + S+DG +NG+ K ++T + +E N
Sbjct: 60 ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 119
Query: 98 ELVGHSIVLTSYPYTDPQHVGVITPYVPQAMIPPQLYGMHQARMPLPLEMEEEPVYVNAK 157
ELVGH I PY DP + G++ Y Q + GM + R LPL+M +EPVYVNAK
Sbjct: 120 ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAK 179
Query: 158 QYRGILRRRQSRAKAELEKKVIKARKVTFHSLKGATIFYNKTLQGLDTYALFSLQPYLHE 217
QY GILRRR++RAKAELE+KVI+ RK PYLHE
Sbjct: 180 QYEGILRRRKARAKAELERKVIRDRK-----------------------------PYLHE 210
Query: 218 SRHQHAMRRARGCGGRFLNTKKLNDNAANSAEKGMNSGA-DSSKGS-TNGTGS 268
SRH+HAMRRAR GGRF ++ E G ++G D +GS TN +GS
Sbjct: 211 SRHKHAMRRARASGGRFAKKSEV--------EAGEDAGGRDRERGSATNSSGS 255
>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana
GN=NFYA9 PE=2 SV=1
Length = 303
Score = 131 bits (329), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 98/171 (57%), Gaps = 37/171 (21%)
Query: 98 ELVGHSI-VLTSYPYTDPQHVGVITPY--VPQAMIPPQLYGMHQARMPLPLEMEEEPVYV 154
+LVGH++ +S PY DP + GV+ Y P +P GM +RMPLP EM +EPV+V
Sbjct: 113 QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVP--YGGMPHSRMPLPPEMAQEPVFV 170
Query: 155 NAKQYRGILRRRQSRAKAELEKKVIKARKVTFHSLKGATIFYNKTLQGLDTYALFSLQPY 214
NAKQY+ ILRRRQ+RAKAELEKK+IK+RK PY
Sbjct: 171 NAKQYQAILRRRQARAKAELEKKLIKSRK-----------------------------PY 201
Query: 215 LHESRHQHAMRRARGCGGRFLNTKKLNDNAAN-SAEKGMNSGADSSKGSTN 264
LHESRHQHAMRR RG GGRF KK N A+ AE+ N S S+N
Sbjct: 202 LHESRHQHAMRRPRGTGGRF--AKKTNTEASKRKAEEKSNGHVTQSPSSSN 250
>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana
GN=NFYA7 PE=2 SV=1
Length = 190
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 91/161 (56%), Gaps = 32/161 (19%)
Query: 109 YPYTDPQHVGVITPYV-PQAMIPPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILRRRQ 167
YPY DP + + P P + QL G+ Q +PLP + EEPV+VNAKQY GILRRRQ
Sbjct: 58 YPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQ 117
Query: 168 SRAKAELEKKVIKARKVTFHSLKGATIFYNKTLQGLDTYALFSLQPYLHESRHQHAMRRA 227
SRA+ E + KVIK+RK PYLHESRH HA+RR
Sbjct: 118 SRARLESQNKVIKSRK-----------------------------PYLHESRHLHAIRRP 148
Query: 228 RGCGGRFLNTKKLNDNAANSA--EKGMNSGADSSKGSTNGT 266
RGCGGRFLN KK +++ +S+ EK S S+ +++GT
Sbjct: 149 RGCGGRFLNAKKEDEHHEDSSHEEKSNLSAGKSAMAASSGT 189
>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana
GN=NFYA3 PE=2 SV=2
Length = 340
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 79/136 (58%), Gaps = 32/136 (23%)
Query: 108 SYPYTDPQHVGVITP-YVPQA-MIPPQLYGMHQARMPLPLEMEE-EPVYVNAKQYRGILR 164
S+ Y DP + G++ Y+PQA PQ+ M R+PLP E+ E +PV+VNAKQY I+R
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMR 193
Query: 165 RRQSRAKAELEKKVIKARKVTFHSLKGATIFYNKTLQGLDTYALFSLQPYLHESRHQHAM 224
RRQ RAK E + K+I+ARK PYLHESRH HA+
Sbjct: 194 RRQQRAKLEAQNKLIRARK-----------------------------PYLHESRHVHAL 224
Query: 225 RRARGCGGRFLNTKKL 240
+R RG GGRFLNTKKL
Sbjct: 225 KRPRGSGGRFLNTKKL 240
>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana
GN=NFYA4 PE=2 SV=1
Length = 198
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 86/160 (53%), Gaps = 35/160 (21%)
Query: 109 YPYTDPQHVGVIT--PYVPQAM--IPPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILR 164
YPY DP + V Y+P + QL GM Q +PL + EEPV+VNAKQY GILR
Sbjct: 53 YPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILR 112
Query: 165 RRQSRAKAELEKKVIKARKVTFHSLKGATIFYNKTLQGLDTYALFSLQPYLHESRHQHAM 224
RRQSRAK E + IKA+K PY+HESRH HA+
Sbjct: 113 RRQSRAKLEARNRAIKAKK-----------------------------PYMHESRHLHAI 143
Query: 225 RRARGCGGRFLNTKKLNDNAANSAEKGMNSGADSSKGSTN 264
RR RGCGGRFLN KK +N + E+ S ++S+ S++
Sbjct: 144 RRPRGCGGRFLNAKK--ENGDHKEEEEATSDENTSEASSS 181
>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana
GN=NFYA8 PE=2 SV=2
Length = 328
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 80/139 (57%), Gaps = 39/139 (28%)
Query: 108 SYPYTDPQHVGVITP--YVPQAMI-PPQLYGMHQARMPLPLEM-EEEPVYVNAKQYRGIL 163
S+ Y DP H G + P Y+PQA I PQ+ R+PLP ++ E EPV+VNAKQ+ I+
Sbjct: 132 SFHYADP-HFGGLMPAAYLPQATIWNPQM-----TRVPLPFDLIENEPVFVNAKQFHAIM 185
Query: 164 RRRQSRAKAELEKKVIKARKVTFHSLKGATIFYNKTLQGLDTYALFSLQPYLHESRHQHA 223
RRRQ RAK E + K+IKARK PYLHESRH HA
Sbjct: 186 RRRQQRAKLEAQNKLIKARK-----------------------------PYLHESRHVHA 216
Query: 224 MRRARGCGGRFLNTKKLND 242
++R RG GGRFLNTKKL +
Sbjct: 217 LKRPRGSGGRFLNTKKLQE 235
>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana
GN=NFYA5 PE=2 SV=1
Length = 308
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 78/137 (56%), Gaps = 30/137 (21%)
Query: 124 VPQAMIPPQLYGMHQARMPLPLEMEE-EPVYVNAKQYRGILRRRQSRAKAELEKKVIKAR 182
P A+ ++ G+ +R+PLP ++E EP++VNAKQY ILRRR+ RAK E + K+IK R
Sbjct: 151 TPTALPHLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCR 210
Query: 183 KVTFHSLKGATIFYNKTLQGLDTYALFSLQPYLHESRHQHAMRRARGCGGRFLNTKKLND 242
K PYLHESRH HA++RARG GGRFLNTKKL +
Sbjct: 211 K-----------------------------PYLHESRHLHALKRARGSGGRFLNTKKLQE 241
Query: 243 NAANSAEKGMNSGADSS 259
++ + M +G + S
Sbjct: 242 SSNSLCSSQMANGQNFS 258
>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana
GN=NFYA6 PE=2 SV=1
Length = 308
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 73/129 (56%), Gaps = 32/129 (24%)
Query: 114 PQHVGVIT-PYVPQAMIP-PQLYGMHQARMPLPLEM-EEEPVYVNAKQYRGILRRRQSRA 170
P G ++ PY Q + PQ+ G+ +RMPLP + E EP++VNAKQY+ ILRRR+ RA
Sbjct: 132 PHFNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRA 191
Query: 171 KAELEKKVIKARKVTFHSLKGATIFYNKTLQGLDTYALFSLQPYLHESRHQHAMRRARGC 230
K E + K+IK RK PYLHESRH HA++R RG
Sbjct: 192 KLEAQNKLIKVRK-----------------------------PYLHESRHLHALKRVRGS 222
Query: 231 GGRFLNTKK 239
GGRFLNTKK
Sbjct: 223 GGRFLNTKK 231
>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana
GN=NFYA2 PE=2 SV=1
Length = 295
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 40/176 (22%)
Query: 105 VLTSYPYTDPQHVGVITPYVPQAMIPPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILR 164
+ T YPY + Q+ GV++ Y Q+ + +PL +E E+ +YVN+KQY GI+R
Sbjct: 101 IYTKYPYGEQQYYGVVSAYGSQSRV----------MLPLNMETEDSTIYVNSKQYHGIIR 150
Query: 165 RRQSRAKAE--LEKKVIKARKVTFHSLKGATIFYNKTLQGLDTYALFSLQPYLHESRHQH 222
RRQSRAKA L++K + +R +PY+H SRH H
Sbjct: 151 RRQSRAKAAAVLDQKKLSSR---------------------------CRKPYMHHSRHLH 183
Query: 223 AMRRARGCGGRFLNTKKLN-DNAANSAEKGMNSGADSSKGSTNGTGSVDSSIVQQE 277
A+RR RG GGRFLNTK N +N+ +A+KG S S+ + S +S +V E
Sbjct: 184 ALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQNSEVVHPE 239
>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana
GN=NFYA10 PE=2 SV=2
Length = 269
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 83/160 (51%), Gaps = 50/160 (31%)
Query: 104 IVLTSYPYTDPQHVGVITPYVPQAMIPPQLYGMHQARMPLPLEMEEE---PVYVNAKQYR 160
++ T +P+ + Q+ GV++ Y Q R+ +PL+ME E +YVN+KQY
Sbjct: 95 MMYTKHPHVE-QYYGVVSAYGSQ---------RSSGRVMIPLKMETEEDGTIYVNSKQYH 144
Query: 161 GILRRRQSRAKAELEKKVIKARKVTFHSLKGATIFYNKTLQGLDTYALFSLQPYLHESRH 220
GI+RRRQSRAKAE K+ + RK PY+H SRH
Sbjct: 145 GIIRRRQSRAKAE---KLSRCRK-----------------------------PYMHHSRH 172
Query: 221 QHAMRRARGCGGRFLNTKKLNDNAANSAEKGMNSGADSSK 260
HAMRR RG GGRFLNTK A++A++ S + SS+
Sbjct: 173 LHAMRRPRGSGGRFLNTK-----TADAAKQSKPSNSQSSE 207
>sp|P23708|NFYA_MOUSE Nuclear transcription factor Y subunit alpha OS=Mus musculus
GN=Nfya PE=1 SV=2
Length = 346
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 57/102 (55%), Gaps = 31/102 (30%)
Query: 140 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKVTFHSLKGATIFYN 197
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+
Sbjct: 250 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERR-------------- 295
Query: 198 KTLQGLDTYALFSLQPYLHESRHQHAMRRARGCGGRFLNTKK 239
YLHESRH+HAM R RG GGRF + K+
Sbjct: 296 ---------------KYLHESRHRHAMARKRGEGGRFFSPKE 322
>sp|P23511|NFYA_HUMAN Nuclear transcription factor Y subunit alpha OS=Homo sapiens
GN=NFYA PE=1 SV=2
Length = 347
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 57/102 (55%), Gaps = 31/102 (30%)
Query: 140 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKVTFHSLKGATIFYN 197
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+
Sbjct: 251 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERR-------------- 296
Query: 198 KTLQGLDTYALFSLQPYLHESRHQHAMRRARGCGGRFLNTKK 239
YLHESRH+HAM R RG GGRF + K+
Sbjct: 297 ---------------KYLHESRHRHAMARKRGEGGRFFSPKE 323
>sp|P18576|NFYA_RAT Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus
GN=Nfya PE=1 SV=1
Length = 341
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 57/102 (55%), Gaps = 31/102 (30%)
Query: 140 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKVTFHSLKGATIFYN 197
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERR-------------- 290
Query: 198 KTLQGLDTYALFSLQPYLHESRHQHAMRRARGCGGRFLNTKK 239
YLHESRH+HAM R RG GGRF + K+
Sbjct: 291 ---------------KYLHESRHRHAMARKRGEGGRFFSPKE 317
>sp|Q5E9S2|NFYA_BOVIN Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA
PE=2 SV=1
Length = 341
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 57/102 (55%), Gaps = 31/102 (30%)
Query: 140 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKVTFHSLKGATIFYN 197
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERR-------------- 290
Query: 198 KTLQGLDTYALFSLQPYLHESRHQHAMRRARGCGGRFLNTKK 239
YLHESRH+HAM R RG GGRF + K+
Sbjct: 291 ---------------KYLHESRHRHAMARKRGEGGRFFSPKE 317
>sp|Q54S29|NFYA_DICDI Nuclear transcription factor Y subunit alpha OS=Dictyostelium
discoideum GN=nfyA PE=3 SV=1
Length = 517
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 55/106 (51%), Gaps = 36/106 (33%)
Query: 130 PPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKVTFHSL 189
P LY ARM E+ EEP+YVNAKQY IL+RR +RAK E E K+ K RK
Sbjct: 216 PHMLY----ARMA---EIVEEPLYVNAKQYNRILKRRAARAKLESENKLPKTRKA----- 263
Query: 190 KGATIFYNKTLQGLDTYALFSLQPYLHESRHQHAMRRARGCGGRFL 235
Y HESRHQHA+RR RGCGGRFL
Sbjct: 264 ------------------------YQHESRHQHAIRRQRGCGGRFL 285
>sp|P06774|HAP2_YEAST Transcriptional activator HAP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP2 PE=1 SV=1
Length = 265
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 63/129 (48%), Gaps = 35/129 (27%)
Query: 149 EEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKVTFHSLKGATIFYNKTLQGLDTYAL 208
E+P YVNAKQY IL+RR +RAK E + ++ + RK
Sbjct: 158 EQPFYVNAKQYYRILKRRYARAKLEEKLRISRERK------------------------- 192
Query: 209 FSLQPYLHESRHQHAMRRARGCGGRFLNTKKLNDNAANSAEKGMNSGADSSKGSTNGTGS 268
PYLHESRH+HAMRR RG GGRFL ++ A K SGA ++
Sbjct: 193 ----PYLHESRHKHAMRRPRGEGGRFLTAAEIK------AMKSKKSGASDDPDDSHEDKK 242
Query: 269 VDSSIVQQE 277
+ + I+Q++
Sbjct: 243 ITTKIIQEQ 251
>sp|P53768|HAP2_KLULA Transcriptional activator HAP2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HAP2 PE=3 SV=1
Length = 300
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 50/99 (50%), Gaps = 29/99 (29%)
Query: 137 HQARMPLPLEMEEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKVTFHSLKGATIFY 196
H + P E E+P YVNAKQY IL+RR +RAK E K+ + R+
Sbjct: 172 HDMNIISPSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERR------------- 218
Query: 197 NKTLQGLDTYALFSLQPYLHESRHQHAMRRARGCGGRFL 235
PYLHESRH+HAMRR RG GGRFL
Sbjct: 219 ----------------PYLHESRHKHAMRRPRGQGGRFL 241
>sp|P24488|HAP2_SCHPO Transcriptional activator hap2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hap2 PE=3 SV=1
Length = 334
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 31/94 (32%)
Query: 150 EPV---YVNAKQYRGILRRRQSRAKAELEKKVIKARKVTFHSLKGATIFYNKTLQGLDTY 206
EPV YVNAKQY IL+RR++RAK LE++ L+G+ T
Sbjct: 5 EPVEGLYVNAKQYHRILKRREARAK--LEER----------------------LRGVQT- 39
Query: 207 ALFSLQPYLHESRHQHAMRRARGCGGRFLNTKKL 240
+ +PYLHESRH+HAMRR RG GGRFL K+
Sbjct: 40 ---TKKPYLHESRHKHAMRRPRGPGGRFLTADKV 70
>sp|Q18F10|AROC_HALWD Chorismate synthase OS=Haloquadratum walsbyi (strain DSM 16790)
GN=aroC PE=3 SV=1
Length = 383
Score = 32.0 bits (71), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 12/137 (8%)
Query: 212 QPYLHESRHQHAM--------RRARGCGGRFLNTKKLNDNAANS-AEKGMNSGADSSKGS 262
+PY+ R H R G GGR + +N AA + A+K + +K
Sbjct: 96 EPYVTAPRPSHGDFTYSAKFGTRNWGGGGRSSARETVNWVAAGAIAQKILTEYGIKAKAH 155
Query: 263 TNGTGSVDSSIVQQERAMEENAHMEHTSSNSNSNNR--SLLSMYNTSSGSVEGNFLGQQR 320
N G + + V E +E E ++ + R + Y T S+ G+ + R
Sbjct: 156 VNQIGDIKAPPVTFEEMLEHTEENEVRCAHPETAERMRERIDEYQTEGDSIGGSIYFEAR 215
Query: 321 GSMQGNGAPR-GALPVK 336
G G GAPR +LP +
Sbjct: 216 GVPAGLGAPRFDSLPAR 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,294,870
Number of Sequences: 539616
Number of extensions: 5303659
Number of successful extensions: 23060
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 19376
Number of HSP's gapped (non-prelim): 3193
length of query: 336
length of database: 191,569,459
effective HSP length: 118
effective length of query: 218
effective length of database: 127,894,771
effective search space: 27881060078
effective search space used: 27881060078
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)