Query 019770
Match_columns 336
No_of_seqs 168 out of 594
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 04:24:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019770.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019770hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2638 UDP-glucose pyrophosph 100.0 3E-107 7E-112 784.0 28.0 336 1-336 158-495 (498)
2 PLN02474 UTP--glucose-1-phosph 100.0 2E-104 5E-109 792.3 35.4 336 1-336 134-469 (469)
3 PF01704 UDPGP: UTP--glucose-1 100.0 1.5E-91 3.2E-96 696.7 23.6 304 1-304 111-420 (420)
4 PLN02830 UDP-sugar pyrophospho 100.0 2.6E-80 5.6E-85 637.4 28.9 325 1-331 192-575 (615)
5 cd00897 UGPase_euk Eukaryotic 100.0 1E-78 2.2E-83 580.7 23.5 242 1-242 58-300 (300)
6 cd04193 UDPGlcNAc_PPase UDPGlc 100.0 1.3E-65 2.9E-70 496.4 20.7 226 1-230 78-323 (323)
7 PLN02435 probable UDP-N-acetyl 100.0 2.5E-65 5.5E-70 514.1 18.8 265 1-268 183-470 (493)
8 COG4284 UDP-glucose pyrophosph 100.0 1.1E-63 2.3E-68 493.3 23.3 308 1-333 160-472 (472)
9 PTZ00339 UDP-N-acetylglucosami 100.0 2E-60 4.4E-65 479.3 20.0 248 1-252 171-441 (482)
10 cd06424 UGGPase UGGPase cataly 100.0 2.2E-59 4.8E-64 449.4 19.2 225 1-229 61-314 (315)
11 cd04180 UGPase_euk_like Eukary 100.0 3.4E-53 7.5E-58 400.2 20.9 197 1-228 59-266 (266)
12 KOG2388 UDP-N-acetylglucosamin 100.0 7.3E-51 1.6E-55 401.4 9.6 272 1-277 160-461 (477)
13 COG1207 GlmU N-acetylglucosami 97.2 0.015 3.2E-07 58.6 16.3 220 55-334 76-310 (460)
14 PF14134 DUF4301: Domain of un 96.5 0.016 3.4E-07 59.4 10.1 194 20-234 230-509 (513)
15 COG4284 UDP-glucose pyrophosph 95.9 0.0027 5.8E-08 64.5 1.0 73 160-232 323-409 (472)
16 PRK05293 glgC glucose-1-phosph 93.8 3.8 8.2E-05 40.3 16.6 140 80-244 117-262 (380)
17 PRK14359 glmU bifunctional N-a 93.6 8.4 0.00018 38.4 19.3 133 80-237 93-231 (430)
18 PRK00844 glgC glucose-1-phosph 91.7 8.1 0.00018 38.6 15.8 162 56-240 98-276 (407)
19 COG0448 GlgC ADP-glucose pyrop 91.7 14 0.0003 37.4 17.0 144 24-177 55-210 (393)
20 PRK14357 glmU bifunctional N-a 90.6 13 0.00028 37.3 16.1 89 80-176 89-179 (448)
21 PRK00725 glgC glucose-1-phosph 90.5 8.8 0.00019 38.7 14.8 162 55-239 109-286 (425)
22 PRK14360 glmU bifunctional N-a 88.2 13 0.00029 37.2 14.1 134 80-234 94-231 (450)
23 PRK02862 glgC glucose-1-phosph 85.5 44 0.00095 33.8 17.8 113 57-177 98-226 (429)
24 PRK14356 glmU bifunctional N-a 85.5 43 0.00093 33.7 18.6 143 72-236 90-240 (456)
25 KOG1460 GDP-mannose pyrophosph 84.2 28 0.00061 34.2 13.1 242 50-331 82-344 (407)
26 TIGR02091 glgC glucose-1-phosp 83.6 45 0.00098 32.4 15.0 144 80-241 111-259 (361)
27 TIGR01208 rmlA_long glucose-1- 82.7 49 0.0011 32.1 20.1 132 82-241 100-236 (353)
28 TIGR02092 glgD glucose-1-phosp 80.8 58 0.0013 31.8 17.0 136 80-242 114-255 (369)
29 PRK14352 glmU bifunctional N-a 78.2 84 0.0018 32.1 18.8 90 79-176 98-191 (482)
30 PRK14355 glmU bifunctional N-a 71.7 1.2E+02 0.0026 30.7 18.0 136 80-236 96-239 (459)
31 COG1208 GCD1 Nucleoside-diphos 62.6 1.6E+02 0.0036 29.0 19.1 133 81-240 100-235 (358)
32 PF00483 NTP_transferase: Nucl 62.3 1.2E+02 0.0026 27.3 11.4 134 81-239 104-245 (248)
33 COG1664 CcmA Integral membrane 61.8 12 0.00027 32.5 4.2 42 288-331 29-72 (146)
34 PRK14353 glmU bifunctional N-a 60.7 1.9E+02 0.004 29.0 16.6 140 79-236 98-239 (446)
35 PRK14358 glmU bifunctional N-a 59.7 2.1E+02 0.0046 29.3 15.7 81 82-169 101-184 (481)
36 KOG1322 GDP-mannose pyrophosph 57.2 1.2E+02 0.0026 30.2 10.5 86 82-176 114-199 (371)
37 PLN02241 glucose-1-phosphate a 55.7 98 0.0021 31.3 10.2 163 55-240 99-281 (436)
38 cd06425 M1P_guanylylT_B_like_N 48.1 1.4E+02 0.0031 26.8 9.2 84 82-174 103-186 (233)
39 KOG4042 Dynactin subunit p27/W 47.0 18 0.00038 32.1 2.7 47 280-327 12-58 (190)
40 PF02261 Asp_decarbox: Asparta 46.5 30 0.00064 29.1 3.9 63 80-163 41-112 (116)
41 PF07959 Fucokinase: L-fucokin 44.4 2.3E+02 0.005 28.7 10.7 201 31-245 7-226 (414)
42 cd06919 Asp_decarbox Aspartate 41.7 94 0.002 26.0 6.1 54 80-152 40-102 (111)
43 cd06426 NTP_transferase_like_2 38.1 2.8E+02 0.0061 24.4 12.3 124 80-234 95-218 (220)
44 cd06428 M1P_guanylylT_A_like_N 35.4 3.5E+02 0.0076 24.7 10.2 84 80-174 103-190 (257)
45 TIGR02623 G1P_cyt_trans glucos 31.0 4.3E+02 0.0092 24.4 11.6 122 80-238 118-243 (254)
46 PRK05449 aspartate alpha-decar 30.5 1.8E+02 0.0038 24.9 6.1 66 80-166 41-115 (126)
47 COG1791 Uncharacterized conser 30.2 94 0.002 28.0 4.6 64 260-324 70-135 (181)
48 cd04645 LbH_gamma_CA_like Gamm 29.5 84 0.0018 26.6 4.2 18 295-312 39-56 (153)
49 COG0663 PaaY Carbonic anhydras 28.7 85 0.0018 28.3 4.2 44 287-331 22-66 (176)
50 TIGR02287 PaaY phenylacetic ac 26.9 88 0.0019 28.2 4.0 20 291-310 23-42 (192)
51 PLN02472 uncharacterized prote 26.8 79 0.0017 29.8 3.8 35 290-325 73-107 (246)
52 TIGR00223 panD L-aspartate-alp 26.3 2.3E+02 0.005 24.2 6.1 66 80-166 41-115 (126)
53 PF05899 Cupin_3: Protein of u 25.3 78 0.0017 23.8 2.9 23 301-323 30-52 (74)
54 cd04197 eIF-2B_epsilon_N The N 24.9 2.8E+02 0.006 24.7 7.0 63 81-144 105-178 (217)
55 cd00208 LbetaH Left-handed par 24.9 1.1E+02 0.0024 21.8 3.6 19 292-310 16-34 (78)
56 PRK13627 carnitine operon prot 24.7 95 0.0021 28.1 3.8 26 289-314 23-48 (196)
57 COG1535 EntB Isochorismate hyd 24.4 64 0.0014 29.5 2.6 37 54-90 111-153 (218)
58 PF04519 Bactofilin: Polymer-f 24.1 1E+02 0.0022 24.4 3.5 16 291-306 11-26 (101)
59 PRK10824 glutaredoxin-4; Provi 22.9 58 0.0013 27.1 1.9 39 29-82 68-107 (115)
60 PF15235 GRIN_C: G protein-reg 22.8 38 0.00083 29.3 0.8 36 74-115 48-83 (137)
61 cd04652 LbH_eIF2B_gamma_C eIF- 22.5 1.2E+02 0.0026 22.6 3.5 39 291-334 36-74 (81)
62 COG0853 PanD Aspartate 1-decar 21.7 3.2E+02 0.007 23.3 6.0 64 80-164 40-112 (126)
63 cd04181 NTP_transferase NTP_tr 21.3 5.4E+02 0.012 22.2 9.4 82 79-171 95-177 (217)
64 PF09601 DUF2459: Protein of u 20.6 32 0.00069 30.8 -0.1 35 131-167 119-153 (173)
65 cd05824 LbH_M1P_guanylylT_C Ma 20.5 1.1E+02 0.0023 22.8 2.8 8 320-327 44-51 (80)
66 COG3185 4-hydroxyphenylpyruvat 20.1 58 0.0013 32.5 1.6 100 5-120 229-333 (363)
No 1
>KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-107 Score=784.02 Aligned_cols=336 Identities=65% Similarity=1.059 Sum_probs=330.9
Q ss_pred CCCcCchHHHHHHHHHcCCCCceeEEEecCCceeeecCCCcccCC-CCCCCCcccCCCCCccchhhhhhcChHHHHHHcC
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPC-KGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQG 79 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~v~~F~Q~~~P~l~~~~~~~~~~-~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~~G 79 (336)
||||+|+++|.++++||.++.++|++|.|+++|+++.|+++|++. .++++..+||||||||+|.+|+.||+||+|+++|
T Consensus 158 MNSfnTdedT~kil~ky~~~kv~i~TF~QS~~PRi~~etlLPv~~~~~d~~~d~WYPPGHGd~f~sl~nSG~Ld~llaqG 237 (498)
T KOG2638|consen 158 MNSFNTDEDTQKILKKYAGSKVDIKTFNQSKYPRIDKETLLPVPKLEADSDNEAWYPPGHGDLFDSLHNSGLLDKLLAQG 237 (498)
T ss_pred ecccccchHHHHHHHHhcCCceeEEEeccccCCccccccccCCCcccCCCCcccccCCCCccHHHHHhccchHHHHHhCC
Confidence 999999999999999999999999999999999999999999998 5666779999999999999999999999999999
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCccee
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIF 159 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~f 159 (336)
+||+|+||+|||||++|..||.|++.++++|+||||+||.+|.|||+|+.++|+++++||+|+|++++++|++.++|++|
T Consensus 238 kEylFVSNiDNLGAtvDL~ILn~~i~~~~ey~MEvTdKT~aDvKgGtLi~y~G~lrlLEiaQVP~ehv~eFkS~kkFkif 317 (498)
T KOG2638|consen 238 KEYLFVSNIDNLGATVDLNILNHVINNNIEYLMEVTDKTRADVKGGTLIQYEGKLRLLEIAQVPKEHVDEFKSIKKFKIF 317 (498)
T ss_pred ceEEEEeccccccceeeHHHHHHHhcCCCceEEEecccchhhcccceEEeecCEEEEEEeccCChhHhhhhccceeEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEHHHHHHHHHhcCcCcceeecccccC-CCCceehhhhhchHHhhcccceEEEEeccceeeccCCCchhHHhhh
Q 019770 160 NTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD-GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSD 238 (336)
Q Consensus 160 ntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~-~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~~~sd 238 (336)
||||+|++|.+++++++++.+.|++|+|+|+++ +.+++||||++|+||++|+++.++.|||+||+|||+|+|||+++||
T Consensus 318 NTNNlWinLkavKrlve~~~l~meIi~N~kti~~~~~viQleTa~GaaIk~F~na~gv~VpRsRFlPVKt~sDLlLv~S~ 397 (498)
T KOG2638|consen 318 NTNNLWINLKAVKKLVEENALNMEIIVNPKTIDRGIEVIQLETAAGAAIKFFDNAIGVNVPRSRFLPVKTCSDLLLVMSN 397 (498)
T ss_pred ccCCeEEehHHHHHHhhcCcccceeecChhhccCCceEEEEhhhhhHHHHhCCCceeeeccccccccccccccceeeecc
Confidence 999999999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred hhccccCeeEecCCcCCCCCCeEEeCCCcccHHHHhhhcCCCCCccccceEEEecceEEccCeEEEEEEEEEcCCCCeEE
Q 019770 239 LYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLE 318 (336)
Q Consensus 239 ~y~~~~g~~~~~~~r~~~~~P~I~L~~~f~~~~~~~~r~~~~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ 318 (336)
+|.+++|.+.++|.|.++..|.|+||++|+++++|..||++||+|++|+||||+|||+||+||+|+|+|+|.|++|.+++
T Consensus 398 Ly~ld~Gsl~l~~~r~~~t~P~vkLg~~F~kv~~f~~rfp~iP~ileLdhLtVsGdV~FGknV~LkGtViIia~~~~~i~ 477 (498)
T KOG2638|consen 398 LYDLDNGSLTLSPSRFGPTPPLVKLGSEFKKVEDFLGRFPGIPDILELDHLTVSGDVWFGKNVSLKGTVIIIANEGDRID 477 (498)
T ss_pred eeeccCCeEEechhhcCCCCCeeecchhhhHHHHHHhcCCCCCccceeceEEEeccEEeccceEEeeEEEEEecCCCeee
Confidence 99999999999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeecceeeCCCCC
Q 019770 319 IPDGAVLENKEINGPGDL 336 (336)
Q Consensus 319 ip~g~~l~n~~~~~~~~~ 336 (336)
||||++|||++|+||++|
T Consensus 478 IP~gsVLEn~~v~gn~~i 495 (498)
T KOG2638|consen 478 IPDGSVLENKIVSGNLRI 495 (498)
T ss_pred cCCCCeeecceEeccccc
Confidence 999999999999999987
No 2
>PLN02474 UTP--glucose-1-phosphate uridylyltransferase
Probab=100.00 E-value=2.5e-104 Score=792.25 Aligned_cols=336 Identities=91% Similarity=1.355 Sum_probs=327.5
Q ss_pred CCCcCchHHHHHHHHHcCCCCceeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHHcCc
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGK 80 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~~G~ 80 (336)
|||+.||++|++||++|++|+.+|++|+|+++||++.+|++|++++....+.+||||||||+|.||++||+||+|+++|+
T Consensus 134 MtS~~T~~~T~~~l~k~~~~~~~i~~F~Q~~~P~l~~~~~~p~~~~~~~~~~~~~P~GhGd~y~aL~~sG~Ld~l~~~G~ 213 (469)
T PLN02474 134 MNSFNTHDDTQKIVEKYTNSNIEIHTFNQSQYPRVVADDFVPWPSKGKTDKDGWYPPGHGDVFPSLMNSGKLDALLSQGK 213 (469)
T ss_pred ECCCchhHHHHHHHHHcCCCccceEEEecCceeeEecCCCCcccccCCCCcceeeeCCCchHHHHHHhCChHHHHHhcCC
Confidence 99999999999999999999999999999999999999999998764445788999999999999999999999999999
Q ss_pred eEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcceee
Q 019770 81 EYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFN 160 (336)
Q Consensus 81 ~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~fn 160 (336)
||+|++|+|||||++||.|||||++++++|+||||+||.+|+|||++|+++|+++++||+|+|++++++|++..+|++||
T Consensus 214 eyifv~nvDNLga~vDp~~lg~~~~~~~e~~~ev~~Kt~~d~kgG~l~~~dgk~~lvEysqvp~e~~~~f~~~~kf~~fN 293 (469)
T PLN02474 214 EYVFIANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFN 293 (469)
T ss_pred EEEEEEecCccccccCHHHHHHHHhcCCceEEEEeecCCCCCCccEEEEECCEEEEEEEecCCHHHHHhhcccccceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhcccceEEEEeccceeeccCCCchhHHhhhhh
Q 019770 161 TNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 240 (336)
Q Consensus 161 tnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~~~sd~y 240 (336)
||||||+|+||+++++.+.+++++|+|+|++++.+++||||||||+|++|+++.+++|||+||+|||||+|++++|||+|
T Consensus 294 tnn~w~~L~~l~~~~~~~~l~~~~I~n~k~~~g~kv~q~Et~ig~ai~~f~~~~~v~VpR~rF~PVK~~~dll~~rsdly 373 (469)
T PLN02474 294 TNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGINVPRSRFLPVKATSDLLLVQSDLY 373 (469)
T ss_pred eeeEEEEHHHHHHHhhcCCCCceeecCCCCCCCeeEEEeHHHHHHHHHhCCCceEEEEchhhccCCCCCCCHHHHHHHHH
Confidence 99999999999999987779999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCeeEecCCcCCCCCCeEEeCCCcccHHHHhhhcCCCCCccccceEEEecceEEccCeEEEEEEEEEcCCCCeEEcC
Q 019770 241 TLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIP 320 (336)
Q Consensus 241 ~~~~g~~~~~~~r~~~~~P~I~L~~~f~~~~~~~~r~~~~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip 320 (336)
.+++||+.+++.|..+..|.|+|+|.|+++++|++||+++|||++|+||||+|||+||+||+|+|+|+|+|++|++++||
T Consensus 374 ~l~~~~l~~~~~~~~~~~p~IeL~~~f~~v~~f~~rf~~iPsl~~~d~LtV~Gdv~fG~~v~l~G~v~i~~~~~~~~~ip 453 (469)
T PLN02474 374 TLVDGFVIRNKARTNPSNPSIELGPEFKKVANFLSRFKSIPSIVELDSLKVSGDVWFGSGIVLKGKVTITAKSGVKLEIP 453 (469)
T ss_pred HhccCeEEecCcccCCCCCcEEECcccccHHhHHHhcCCCCCcccCCeEEEeeeeEECCCcEEEEEEEEEcCCCCeeecC
Confidence 99999999999987778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeecceeeCCCCC
Q 019770 321 DGAVLENKEINGPGDL 336 (336)
Q Consensus 321 ~g~~l~n~~~~~~~~~ 336 (336)
||++|+|++|+||+++
T Consensus 454 ~g~~l~~~~~~~~~~~ 469 (469)
T PLN02474 454 DGAVLENKDINGPEDL 469 (469)
T ss_pred CCcEecceeecccCCC
Confidence 9999999999999985
No 3
>PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2.7.7.9 from EC). Also known as UDP-glucose pyrophosphorylase (UDPGP) and Glucose-1-phosphate uridylyltransferase. UTP--glucose-1-phosphate uridylyltransferase catalyses the interconversion of MgUTP + glucose-1-phosphate and UDP-glucose + MgPPi []. UDP-glucose is an important intermediate in mammalian carbohydrate interconversion involved in various metabolic roles depending on tissue type []. In Dictyostelium discoideum (Slime mold), mutants in this enzyme abort the development cycle []. Also within this family is UDP-N-acetylglucosamine pyrophosphorylase (Q16222 from SWISSPROT) [] and two hypothetical proteins from Borrelia burgdorferi, the Lyme disease spirochaete (O51893 from SWISSPROT and O51036 from SWISSPROT).; GO: 0016779 nucleotidyltransferase activity, 0008152 metabolic process; PDB: 2OEG_A 2OEF_A 2YQS_A 2YQJ_A 2YQH_B 2YQC_A 3OH4_A 3OGZ_A 3OH3_A 3OH1_A ....
Probab=100.00 E-value=1.5e-91 Score=696.68 Aligned_cols=304 Identities=52% Similarity=0.861 Sum_probs=273.2
Q ss_pred CCCcCchHHHHHHHHHcCCCCceeEEEecCCceeeecCCCcccCCCC-CC-CCcccCCCCCccchhhhhhcChHHHHHHc
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKG-KT-DKDGWYPPGHGDVFPSLMNSGKLDALISQ 78 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~v~~F~Q~~~P~l~~~~~~~~~~~~-~~-~~~~~~P~GhGdi~~aL~~sGlld~l~~~ 78 (336)
|||+.||++|++||++|..+..+|++|+|+++||++.+|+++++++. ++ ...+||||||||+|.||++||+||+|+++
T Consensus 111 MtS~~T~~~T~~~l~kyfg~~~~v~~F~Q~~~P~i~~d~~~~l~~~~~~~~~~~~w~P~GhGdi~~aL~~sG~Ld~l~~~ 190 (420)
T PF01704_consen 111 MTSFNTHEDTRKFLEKYFGLDVDVFFFKQSKLPAIDADGKLPLESKPKDSIAEDEWYPPGHGDIYRALYNSGLLDKLLAR 190 (420)
T ss_dssp EEETTTHHHHHHHHHHGCGSSCCEEEEEE-EEEEEETTTTCBEEETTEESEEEGGEEE-TGGGHHHHHHHTTHHHHHHHT
T ss_pred ecCcccHHHHHHHHHHhcCCCcceEEEeecCcceEeCCCccccccccccccchhhccCCCCcceehhhhccChHHHHHHc
Confidence 99999999999999994333346999999999999999999999874 22 24579999999999999999999999999
Q ss_pred CceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcce
Q 019770 79 GKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKI 158 (336)
Q Consensus 79 G~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~ 158 (336)
|+||+||+|+||||+++||.||||+++++++|+||||+||.+|+|||++|+++|+++++||+|+|++++++|++.+++.+
T Consensus 191 G~eyifv~nvDNL~a~~Dp~~lG~~~~~~~~~~~evv~Kt~~dek~Gvl~~~~G~~~vvEysqip~~~~~~~~~~~~~~~ 270 (420)
T PF01704_consen 191 GIEYIFVSNVDNLGAVVDPVFLGYMIEKNADFGMEVVPKTSPDEKGGVLCRYDGKLQVVEYSQIPKEHMAEFKDIKGFLL 270 (420)
T ss_dssp T--EEEEEETTBTT-TT-HHHHHHHHHTT-SEEEEEEE-CSTTTSSEEEEEETTEEEEEEGGGS-HHGHHHHTSTTTSBE
T ss_pred CCeEEEEEecCCcccccCHHHHHHHHhccchhheeeeecCCCCCceeEEEEeCCccEEEEeccCCHHHHHhhhccccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeEEEEHHHHHHHHHhcCcCcceeecccccC----CCCceehhhhhchHHhhcccceEEEEeccceeeccCCCchhH
Q 019770 159 FNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD----GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLL 234 (336)
Q Consensus 159 fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~----~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~ 234 (336)
||||||||+|++|+++++...+.||+|+|+|+++ +++++|||||||+++..|+++.+++|||+||+||||++|||+
T Consensus 271 FntnNi~~~l~~l~~~~~~~~~~Lp~h~a~Kki~~~d~~~~~~q~Et~i~~~i~~f~~~~~v~V~R~rF~PvKn~~dLl~ 350 (420)
T PF01704_consen 271 FNTNNIWFSLDFLKRLLERDELQLPIHVAKKKIPYVDNGIKVIQFETAIGFAIFQFDNSFAVEVPRDRFAPVKNTSDLLL 350 (420)
T ss_dssp EEEEEEEEEHHHHHHHHHTTTCCS-EEEEEEESSEECTEEEEEEEECGGGGGGGGCTSEEEEEE-GGG--B-SSHHHHHH
T ss_pred EEeceeeEEHHHHHHHHHhccccCccEEcchhcccccCCccEEeehhhhhchHhhccCcEEEEEcHHHcCCccccCccee
Confidence 9999999999999999998778999999999994 789999999999999999999999999999999999999999
Q ss_pred HhhhhhccccCeeEecCCcCCCCCCeEEeCCCcccHHHHhhhcCCCCCccccceEEEecceEEccCeEEE
Q 019770 235 VQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLK 304 (336)
Q Consensus 235 ~~sd~y~~~~g~~~~~~~r~~~~~P~I~L~~~f~~~~~~~~r~~~~p~i~~~~~L~V~Gdv~fg~~v~l~ 304 (336)
+|||+|.+++|.+.+++.|..+..|+|+||++|+++++|++||+++|+|++|+||+|+|||+||+||+||
T Consensus 351 ~~Sd~y~~~~~~~~~~~~~~~~~~p~i~lg~~f~~v~~~~~r~~~ip~l~~~~~l~v~gdv~fg~~v~lk 420 (420)
T PF01704_consen 351 VRSDLYDLDDGTLVRNPLRAFHTRPLIKLGDHFKKVDDFEKRFPSIPSLLELDSLTVSGDVTFGKNVVLK 420 (420)
T ss_dssp HHSTTEEEETTEEEEHCCHCSSCHHEEEECGGGSSHHHHHHHBSSS-BETTEEEEEEESSEEE-TT-EEE
T ss_pred eccceeccccceeeecccccCCCCCeeccCcccCchHHhhhhcCCCCCcccCCcceEecceEECCCcEeC
Confidence 9999999999999999999877789999999999999999999999999999999999999999999997
No 4
>PLN02830 UDP-sugar pyrophosphorylase
Probab=100.00 E-value=2.6e-80 Score=637.35 Aligned_cols=325 Identities=22% Similarity=0.245 Sum_probs=294.3
Q ss_pred CCCcCchHHHHHHHHHcCCCCce---eEEEecCCceeeecC-CCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVE---IHTFNQSQYPRLCAD-DFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALI 76 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~---v~~F~Q~~~P~l~~~-~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~ 76 (336)
|||++||++|++||++|+|||++ |++|+|+++||++.+ +++++++ .|+++++|+||||||+|+||++||+|++|+
T Consensus 192 MTS~~T~~~T~~~~~~n~~FGl~~~~v~~F~Q~~~P~~~~~~g~~~l~~-~d~~~i~~~P~GhGdi~~aL~~sGlLd~l~ 270 (615)
T PLN02830 192 MTSDDTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMDNDARLALDP-NDPYKIQTKPHGHGDVHALLYSSGLLDKWL 270 (615)
T ss_pred ECCcchhHHHHHHHHHCCccCCCccceEEEEcCcceeEecCCCcccccC-CCCCccccCCCCccHHHHHHHHCCCHHHHH
Confidence 99999999999999999999994 999999999999876 6666644 334799999999999999999999999999
Q ss_pred HcCceEEEEEeCcc-ccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe---eCCe--EEEEEeecCCh------
Q 019770 77 SQGKEYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS---YEGK--VQLLEIAQVPD------ 144 (336)
Q Consensus 77 ~~G~~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~---~~g~--~~~vEysqlp~------ 144 (336)
++|+||+||+|||| |++.+||.|||||+.++++|+||||+|++ .|++|++|+ .||+ +++|||+|+++
T Consensus 271 ~~G~~yi~v~~vDN~L~~~Adp~flG~~~~~~~d~~~kvv~K~~-~E~vGvi~~~~~~dG~~l~~vVEYse~~~ll~~a~ 349 (615)
T PLN02830 271 SAGKKWVVFFQDTNGLVFKAIPAALGVSATKGFDMNSLAVPRKA-KEAIGAIAKLTHKDGREMVINVEYNQLDPLLRATG 349 (615)
T ss_pred HcCCEEEEEEeccchhhhcccHHHhHHHHhcCCceEEEEEECCC-CcccceEEEEecCCCCeeeEEEeecccCHHHHhcc
Confidence 99999999999999 99999999999999999999999999955 688999998 5777 68999999864
Q ss_pred ---hhhhhhcccCCccee--eeeeEEEEHHHHHHHHHhcCcCcceeecccccC-CCCceehhhhhchHHhhcccceEE--
Q 019770 145 ---EHVNEFKSIEKFKIF--NTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD-GIKVLQLETAAGAAIRFFDHAIGC-- 216 (336)
Q Consensus 145 ---~~~~~~~~~~~~~~f--ntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~-~~~~~qlE~~~~d~~~~~~~~~~i-- 216 (336)
+++.+| +.|++| ||||||++|++|+++++...+.||+|+|+|++| +++++|+||.|+.+++.|.++.++
T Consensus 350 ~p~g~l~~~---~~~s~FPgNtN~L~v~L~a~~~~l~~~~~~lp~ivNpK~~d~~~~v~q~~trle~~mq~f~~~~~~~~ 426 (615)
T PLN02830 350 HPDGDVNDE---TGYSPFPGNINQLILKLGPYVKELAKTGGVIEEFVNPKYKDATKTAFKSPTRLECMMQDYPKTLPPSA 426 (615)
T ss_pred CCCcccccc---cccccCCCCceeeEeeHHHHHHHHHhCCCccceeccCcccCCCCceeecchHHHHHHHHHhhhcCccc
Confidence 444444 459999 999999999999999988778999999999999 678888888888888888766655
Q ss_pred ----EE--eccceeeccCC-C--------------------------chhHHhhhhhccccCeeEecCCcCCCCCCeEEe
Q 019770 217 ----NV--HRSRFLPVKAT-S--------------------------DLLLVQSDLYTLADGFVTRNEARKNPANPTIEL 263 (336)
Q Consensus 217 ----~V--~R~rF~PVKn~-~--------------------------dll~~~sd~y~~~~g~~~~~~~r~~~~~P~I~L 263 (336)
.| +|+||+||||+ + |+++++||+|.++.+.....+.+..+.+|.|+|
T Consensus 427 ~vg~~v~~~~~~f~PVKn~~s~a~~k~~~~~~~~~~~s~e~d~y~~~~llL~~s~~~~~~~~~~~~~~~~~~~~~P~I~L 506 (615)
T PLN02830 427 KVGFTVFDNWLAYSPVKNSPADGAAKVPEGNPTHSATSGEMAIYGANCLILRKAGADVEEPVEDVVFNGIEVEVGPRIVL 506 (615)
T ss_pred ccCceecCchheeccccCChHHhhhhcccCCCccCcchhhHHHHHHHHHHHHhcCCccccCccccccCCcccCCCCeEEE
Confidence 88 88899999998 8 889999999999998776666666668999999
Q ss_pred CCCcc-cHHHHhhhc-CCCCCccccceEEEecceEEccCeEEEEEEEEEcCCCCeEEcCCCCeeecceee
Q 019770 264 GPEFK-KVGNFLSRF-KSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEIN 331 (336)
Q Consensus 264 ~~~f~-~~~~~~~r~-~~~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l~n~~~~ 331 (336)
+|.|+ ++++|++|| +++|+|+++|+|+|+|+++||++|.|+|+|+|.|++|++++| +|++|+|++..
T Consensus 507 ~p~f~~~~~~~~~k~~~~~~si~~~s~L~v~G~~~~~~~v~LdG~viI~a~~~~~~~i-~g~~v~N~g~~ 575 (615)
T PLN02830 507 KPAFALTFSELKKKVAPGSVKISQRSTLVLEGADIVIENLSLDGALVVRAVPGAEVTV-GGLRVKNKGWT 575 (615)
T ss_pred CchhhhHHHHHHHHhcCCCCcccCCCeEEEEeeeEEecCeEEEEEEEEEcCCCCeEEe-cCeEEecCCcE
Confidence 99999 799999999 999999999999999999999999999999999999999999 89999998764
No 5
>cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose. UGPase (UDP-Glucose Pyrophosphorylase) catalyzes the reversible production of UDP-Glucose and pyrophosphate (PPi) from Glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids, glycoproteins, and proteoglycans. UGPase is found in both prokaryotes and eukaryotes. Interestingly, while the prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity. This family consists of mainly eukaryotic UTP-glucose-1-phosphate uridylyltransferases.
Probab=100.00 E-value=1e-78 Score=580.72 Aligned_cols=242 Identities=69% Similarity=1.114 Sum_probs=233.3
Q ss_pred CCCcCchHHHHHHHHHcCCCCceeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHHcCc
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGK 80 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~~G~ 80 (336)
|||+.||++|++||++|++...+|++|+|+++||++.+|+++++...++++++|+|+||||+|.||++||+|++|+++|+
T Consensus 58 MtS~~T~~~T~~~l~~~~~~~~~v~~F~Q~~~P~~~~~~~~~l~~~~~~~~~~~~P~GhG~i~~aL~~sG~L~~l~~~G~ 137 (300)
T cd00897 58 MNSFNTDEDTKKILKKYAGVNVDIHTFNQSRYPRISKETLLPVPSWADSPDEEWYPPGHGDIFESLYNSGLLDTLLAQGK 137 (300)
T ss_pred ECCCcchHHHHHHHHHcCCCccCeEEEecCCcccCccccCccccccCCCcceeeccCCCchHHHHHHHCCcHHHHHhcCC
Confidence 99999999999999999987778999999999999999999998433458899999999999999999999999999999
Q ss_pred eEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcceee
Q 019770 81 EYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFN 160 (336)
Q Consensus 81 ~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~fn 160 (336)
||+|++|+|||||++||.|||||++++++|+||||+|+.+|||||++|+++|+++++||+|+|++++++|++..+|++||
T Consensus 138 ~yi~v~nvDNL~a~~Dp~~lg~~~~~~~~~~~evv~Kt~~dek~G~l~~~~g~~~vvEyse~p~e~~~~~~~~~~~~~~n 217 (300)
T cd00897 138 EYLFVSNIDNLGATVDLRILNHMVDNKAEYIMEVTDKTRADVKGGTLIQYEGKLRLLEIAQVPKEHVDEFKSIKKFKIFN 217 (300)
T ss_pred EEEEEEecccccccCCHHHHHHHHhcCCceEEEEeecCCCCCcccEEEEECCEEEEEEeccCCHHHHHhhcCcccceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEHHHHHHHHHhcCcCcceeecccccC-CCCceehhhhhchHHhhcccceEEEEeccceeeccCCCchhHHhhhh
Q 019770 161 TNNLWVNLKAIKRLVEADALKMEIIPNPKEVD-GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDL 239 (336)
Q Consensus 161 tnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~-~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~~~sd~ 239 (336)
||||||+|++|+++++...+.||+|+|.|+++ +++++|||+||||+|++|+++.+++|||+||+||||++|||++|||+
T Consensus 218 t~n~~~~l~~L~~~~~~~~~~lp~h~~~K~v~p~~~~~qlE~~i~da~~~~~~~~~~eV~R~rF~PvKn~~dll~~~sd~ 297 (300)
T cd00897 218 TNNLWVNLKAVKRVVEENALDLEIIVNPKTVDGGLNVIQLETAVGAAIKNFDNALGVNVPRSRFLPVKTTSDLLLVRSDL 297 (300)
T ss_pred EeEEEEEHHHHHHHHHhccCCCCeeecccccCCCCCEEEeHhHhhhHHHhCCCcEEEEEChhhcCCCCChHHHHhhhhcc
Confidence 99999999999999987668899999999997 68999999999999999999999999999999999999999999999
Q ss_pred hcc
Q 019770 240 YTL 242 (336)
Q Consensus 240 y~~ 242 (336)
|.+
T Consensus 298 y~~ 300 (300)
T cd00897 298 YSL 300 (300)
T ss_pred ccC
Confidence 974
No 6
>cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1 to PPi and UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc), the activated form of GlcNAc, is a key precursor of N- and O-linked glycosylations. It is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker which anchors a variety of cell surface proteins to the plasma membrane. In bacteria, UDPGlcNAc represents an essential precursor for both peptidoglycan and lipopolysaccharide biosynthesis. Human UAP has two isoforms, resulting from alternative splicing of a single gene and differing by the presence or absence of 17 amino acids. UDPGlcNAc pyrophosphorylase shares significant sequence and structure conservation with UDPglucose pyrophosphorylase.
Probab=100.00 E-value=1.3e-65 Score=496.43 Aligned_cols=226 Identities=22% Similarity=0.332 Sum_probs=213.8
Q ss_pred CCCcCchHHHHHHHHHcCCCCc---eeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNV---EIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALIS 77 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl---~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~ 77 (336)
|||+.||++|++||++++|||+ +|++|.|+++||++.+|+++++.+ ++++|+|+||||+|.||++||+|++|++
T Consensus 78 mtS~~t~~~t~~~~~~~~~fGl~~~~i~~f~Q~~~P~~~~~g~~~l~~~---~~~~~~P~GhG~i~~aL~~sG~l~~l~~ 154 (323)
T cd04193 78 MTSEATHEETRKFFKENNYFGLDPEQVHFFQQGMLPCVDFDGKILLEEK---GKIAMAPNGNGGLYKALQTAGILEDMKK 154 (323)
T ss_pred EcChhHhHHHHHHHHhCCcCCCCCceEEEEecCceeeEcCCCccccCCC---CccccCCCCchHHHHHHHHCChHHHHHh
Confidence 9999999999999999999999 599999999999999999999865 7899999999999999999999999999
Q ss_pred cCceEEEEEeCcc-ccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCc
Q 019770 78 QGKEYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKF 156 (336)
Q Consensus 78 ~G~~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~ 156 (336)
+|+||++|+|+|| |++++||.+|||+++++++|++|||+|+.++||||++|+.+|+++++||+|+|+++++++++.+.+
T Consensus 155 ~G~~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~~~ekvG~l~~~~g~~~vvEysel~~~~~~~~~~~g~l 234 (323)
T cd04193 155 RGIKYIHVYSVDNILVKVADPVFIGFCISKGADVGAKVVRKRYPTEKVGVVVLVDGKPQVVEYSEISDELAEKRDADGEL 234 (323)
T ss_pred CCCEEEEEEecCcccccccCHHHhHHHHHcCCceEEEEEECCCCCCceeEEEEECCeEEEEEeecCCHHHHhccCcCCcE
Confidence 9999999999999 999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred ceeeeeeEE---EEHHHHHHHHHhcCcCcceeecccccC------------CCCceehhhhhchHHhhcccceEEEEecc
Q 019770 157 KIFNTNNLW---VNLKAIKRLVEADALKMEIIPNPKEVD------------GIKVLQLETAAGAAIRFFDHAIGCNVHRS 221 (336)
Q Consensus 157 ~~fntnni~---~~l~~l~~~~~~~~~~lp~~vn~K~v~------------~~~~~qlE~~~~d~~~~~~~~~~i~V~R~ 221 (336)
.||+|||| |+|+||+++++.....||+|+|+|+++ ++|++|||+||||+|++++++.+++|+|+
T Consensus 235 -~f~~~ni~~~~fsl~fl~~~~~~~~~~l~~h~a~Kki~~~d~~~~~~~p~~~n~~klE~fifd~~~~~~~~~~~eV~R~ 313 (323)
T cd04193 235 -QYNAGNIANHFFSLDFLEKAAEMEEPSLPYHIAKKKIPYVDLEGGLVKPDEPNGIKLELFIFDVFPFAKNFVCLEVDRE 313 (323)
T ss_pred -ecccchHhhheeCHHHHHHHHhhccccCCceEeccccCcccCcCcEeccCCCcEEEeHHHHHHHHHhCCceEEEEEChh
Confidence 57777665 788999999987656799999999984 56899999999999999999999999999
Q ss_pred -ceeeccCCC
Q 019770 222 -RFLPVKATS 230 (336)
Q Consensus 222 -rF~PVKn~~ 230 (336)
||+||||++
T Consensus 314 ~~F~PvKn~~ 323 (323)
T cd04193 314 EEFSPLKNAD 323 (323)
T ss_pred hccccCcCCC
Confidence 699999984
No 7
>PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase
Probab=100.00 E-value=2.5e-65 Score=514.07 Aligned_cols=265 Identities=19% Similarity=0.201 Sum_probs=235.2
Q ss_pred CCCcCchHHHHHHHHHcCCCCc---eeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNV---EIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALIS 77 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl---~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~ 77 (336)
|||+.||++|++||++|+|||+ +|+||+|+++||++.+|+++++++ ++++|+||||||+|.||++||+|++|++
T Consensus 183 MTS~~T~~~T~~ff~~~~~FGl~~~~V~fF~Q~~~P~~~~dg~i~l~~~---~~i~~~P~GnGgiy~aL~~sG~Ld~l~~ 259 (493)
T PLN02435 183 MTSPFTDEATRKFFESHKYFGLEADQVTFFQQGTLPCVSKDGKFIMETP---FKVAKAPDGNGGVYAALKSSRLLEDMAS 259 (493)
T ss_pred eCCcchhHHHHHHHHhCCCCCCCccceEEEecCCcceECCCCCcccCCC---cccccCCCCCcHHHHHHHHCCcHHHHHh
Confidence 9999999999999999999999 499999999999999999999876 7899999999999999999999999999
Q ss_pred cCceEEEEEeCcc-ccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe--eCCeEEEEEeecCChhhhhhhccc-
Q 019770 78 QGKEYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS--YEGKVQLLEIAQVPDEHVNEFKSI- 153 (336)
Q Consensus 78 ~G~~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~--~~g~~~~vEysqlp~~~~~~~~~~- 153 (336)
+|+||+||+|+|| |++++||.||||++.++++|++|||+|+.++||||++|+ .+|++++|||+|++++..++.++.
T Consensus 260 ~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~d~~~kVv~K~~~~EkvG~i~~~~~~g~~~vvEYsEl~~~~~~~~~~~~ 339 (493)
T PLN02435 260 RGIKYVDCYGVDNALVRVADPTFLGYFIDKGVASAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDQAMASAINQQT 339 (493)
T ss_pred cCCEEEEEEecccccccccCHHHHHHHHhcCCceEEEeeecCCCCCceeEEEEecCCCCEEEEEeccCCHHHHhccCccc
Confidence 9999999999999 999999999999999999999999999999999999998 689999999999999887655432
Q ss_pred CC--cceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccC----CCCceehhhhhchHHhhcccceEEEEeccc-eeec
Q 019770 154 EK--FKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD----GIKVLQLETAAGAAIRFFDHAIGCNVHRSR-FLPV 226 (336)
Q Consensus 154 ~~--~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~----~~~~~qlE~~~~d~~~~~~~~~~i~V~R~r-F~PV 226 (336)
++ |.++|++|+||+++||+++.+...-.||||+|.|+++ .+|+||||+||||+|++++++.+++|+|++ |+||
T Consensus 340 g~L~~~~gnI~~h~fs~~fL~~~~~~~~~~l~~H~A~Kkip~~~~~~ngiK~E~FiFDvf~~a~~~~~~eV~R~~EFaPl 419 (493)
T PLN02435 340 GRLRYCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIFDAFPYAPSTALFEVLREEEFAPV 419 (493)
T ss_pred cccccchhhHHHhhccHHHHHHHHHhhhhcCCceeeccccCccCCCcceEEeeeeeecchhhcCceEEEEEchhhccCcc
Confidence 44 4456999999999999999765333699999999997 578999999999999999999999999995 9999
Q ss_pred cCCCc-----hhHHhhhhhccccCeeEecCCcCCCC----CCeEEeCCCcc
Q 019770 227 KATSD-----LLLVQSDLYTLADGFVTRNEARKNPA----NPTIELGPEFK 268 (336)
Q Consensus 227 Kn~~d-----ll~~~sd~y~~~~g~~~~~~~r~~~~----~P~I~L~~~f~ 268 (336)
||++. ..++|.+++.++..|+..++....+. ...|+++|.++
T Consensus 420 KN~~g~~~Dsp~tar~~l~~~~~~wl~~aG~~~~~~~~~~~~~vEisP~~s 470 (493)
T PLN02435 420 KNANGSNFDTPESARLLVLRLHTRWVVAAGGFLTHSVPLYATGVEVSPLCS 470 (493)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHcCCEecCCccccCCcEEeCCcee
Confidence 99853 36899999988888877666432111 23577777654
No 8
>COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-63 Score=493.25 Aligned_cols=308 Identities=41% Similarity=0.655 Sum_probs=284.9
Q ss_pred CCCcCchHHHHHHHHHcCCCCce---eEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVE---IHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALIS 77 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~---v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~ 77 (336)
||| .|+++|..||+.++|||++ |.||+|+.+||+..++..|+.+..+++ ++|+|+||||+|.||+.||++++|.+
T Consensus 160 MtS-~nt~~t~s~f~~~~Y~~~~k~~I~fF~Q~~~P~~~~~sg~~~~~~~~~~-~~~~P~GnG~lf~aL~~SG~le~l~~ 237 (472)
T COG4284 160 MTS-LNTEETDSYFKSNDYFGLDKEDIFFFVQSLFPRLLSDSGLPFLESDDSN-LAWYPPGNGDLFKALKSSGILEKLIA 237 (472)
T ss_pred Eec-CCcHHHHHHHhhhhhcCCCHHHeEEEecCCcceeecccCccccccCCcc-cccCCCCCccHHHHHHhcchHHHHHh
Confidence 999 9999999999999999993 999999999987777777776665333 99999999999999999999999999
Q ss_pred cCceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcc
Q 019770 78 QGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFK 157 (336)
Q Consensus 78 ~G~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~ 157 (336)
+|+||+||+||||||+++||.|||+++.++++++||+|.|+.+++|||+|+.++|+++++||||+|++++++|++.+.++
T Consensus 238 ~G~e~lfV~nIDNL~~~vD~~~lg~~~~~~~e~~~e~t~Kt~a~ekvG~Lv~~~g~~rllEysev~~~~~~~~~s~~~~~ 317 (472)
T COG4284 238 QGIEYLFVSNIDNLGATVDLKFLGFMAETNYEYLMETTDKTKADEKVGILVTYDGKLRLLEYSEVPNEHREEFTSDGKLK 317 (472)
T ss_pred cCceEEEEecccccccccCHHHHHHHHhcCcceeEEEeecccccccceEEEEeCCceEEEEEecCChhHhhhhcccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCC-CceehhhhhchHHhhcccceEEEEeccceeeccCCCchhHHh
Q 019770 158 IFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGI-KVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQ 236 (336)
Q Consensus 158 ~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~-~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~~~ 236 (336)
+|||||||+.+-.++.+.+..-+.||+|.|.|+++.. +.+|++|+++.++..|++ . |.| .|++.+.
T Consensus 318 ~~n~Nni~l~~~~~~~l~~~~~l~Lpi~~a~Kki~~~~~~~~~~t~i~~~i~kfe~-~--------FI~----fDlF~~~ 384 (472)
T COG4284 318 YFNTNNIWLHLFSVKFLKEAAYLNLPIHKAIKKIPQLDNIIQLTTAIGKNISKFEN-E--------FIP----FDLFLYK 384 (472)
T ss_pred eeccccceeehhHHHHHHhhhccCCcchhhhcccCccccceeeccccccchhhccc-c--------ccc----eeeeEEE
Confidence 9999999999999999988777899999999999855 699999999999999986 3 788 8888888
Q ss_pred hhhhccccCeeEecCCcCCCCCCeEEeC-CCcccHHHHhhhcCCCCCccccceEEEecceEEccCeEEEEEEEEEcCCCC
Q 019770 237 SDLYTLADGFVTRNEARKNPANPTIELG-PEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGE 315 (336)
Q Consensus 237 sd~y~~~~g~~~~~~~r~~~~~P~I~L~-~~f~~~~~~~~r~~~~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~ 315 (336)
|| ++|.+...| |.....|++.++ .+|.+++.+..+++.+|.++++.+++|+|+|.||++++|+ .+.+..
T Consensus 385 s~----~~~~~~~vp-R~~~f~Plkn~~~~~~~~~~~~~~~~~~~~~~~e~~~~~is~nv~~~~~~~lk-----~~~e~~ 454 (472)
T COG4284 385 SD----ENGGLLLVP-RFGEFSPLKNLEGSHFDNVETFTCGIPRIPLILELEGLTISGNVLFGRNVTLK-----YASENT 454 (472)
T ss_pred ec----CCCceEecc-ccCCCCchhhccCCCCCcHHhhhcccccccchhhhccceecCceEeeecceee-----ecCCCc
Confidence 88 778777778 644467999995 4499999999999999999999999999999999999999 789999
Q ss_pred eEEcCCCCeeecceeeCC
Q 019770 316 KLEIPDGAVLENKEINGP 333 (336)
Q Consensus 316 ~~~ip~g~~l~n~~~~~~ 333 (336)
.++||+|+++||++|.|+
T Consensus 455 ~l~~~~~s~~e~~ii~~~ 472 (472)
T COG4284 455 SLCIPNKSFLENVIITGN 472 (472)
T ss_pred eEeccCCeeeeeeeEecC
Confidence 999999999999999985
No 9
>PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional
Probab=100.00 E-value=2e-60 Score=479.26 Aligned_cols=248 Identities=19% Similarity=0.237 Sum_probs=221.3
Q ss_pred CCCcCchHHHHHHHHHcCCCCce---eEEEecCCceeeecC-CCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVE---IHTFNQSQYPRLCAD-DFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALI 76 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~---v~~F~Q~~~P~l~~~-~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~ 76 (336)
|||+.||+.|++||++|+|||++ |++|+|+++||++.+ |++.++++ ++++|+|+||||+|.||++||+|++|+
T Consensus 171 MTS~~t~~~t~~~f~~~~~FGl~~~~V~~F~Q~~~P~i~~~~g~ill~~~---~~i~~~P~GnGgiy~aL~~sG~Ld~l~ 247 (482)
T PTZ00339 171 LTSSFNHDQTRQFLEENNFFGLDKEQVIFFKQSSLPCYDENTGRFIMSSQ---GSLCTAPGGNGDVFKALAKCSELMDIV 247 (482)
T ss_pred EeCcchHHHHHHHHHhccccCCCcccEEEEecCCcceEecCCCCcccCCC---CceeeCCCCCcHHHHHHHHCCcHHHHH
Confidence 99999999999999999999994 999999999999875 77777655 689999999999999999999999999
Q ss_pred HcCceEEEEEeCcc-ccccccHHHHHHHHhcCC-ceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhh---hc
Q 019770 77 SQGKEYVFAANSDN-LGAIVDLKILNHLIQNKN-EYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNE---FK 151 (336)
Q Consensus 77 ~~G~~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~-~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~---~~ 151 (336)
++|+||+||+|||| |++++||.||||++++++ +++.+|+ |+.++||||++|+.+|++++|||+|++++..+. ++
T Consensus 248 ~~Gi~yi~v~~vDN~L~k~~DP~flG~~~~~~~~~~~~kvv-k~~~~EkvG~~~~~~g~~~vvEYsEi~~~~~~~~~~~~ 326 (482)
T PTZ00339 248 RKGIKYVQVISIDNILAKVLDPEFIGLASSFPAHDVLNKCV-KREDDESVGVFCLKDYEWQVVEYTEINERILNNDELLT 326 (482)
T ss_pred HcCCEEEEEEecCcccccccCHHHhHHHHHCCchhheeeee-cCCCCCceeEEEEeCCcccEEEEeccChhhhhcccccC
Confidence 99999999999999 899999999999999999 7777777 888999999999999999999999998765543 33
Q ss_pred ccCCcceeeeeeEEEEHHHHHHHHHh-cCcCcceeecccccC-------CCCceehhhhhchHHhhcccceEEEEeccc-
Q 019770 152 SIEKFKIFNTNNLWVNLKAIKRLVEA-DALKMEIIPNPKEVD-------GIKVLQLETAAGAAIRFFDHAIGCNVHRSR- 222 (336)
Q Consensus 152 ~~~~~~~fntnni~~~l~~l~~~~~~-~~~~lp~~vn~K~v~-------~~~~~qlE~~~~d~~~~~~~~~~i~V~R~r- 222 (336)
+...|.++|+|||||+++||++++++ ....||+|+|.|+++ .+|+||||+||||+|++++++.+++|+|++
T Consensus 327 g~l~f~~gnI~~h~fsl~fl~~~~~~~~~~~l~~H~a~Kkip~~~~~~~~png~K~E~FiFDvf~~~~~~~~~ev~R~~e 406 (482)
T PTZ00339 327 GELAFNYGNICSHIFSLDFLKKVAANRLYESTPYHAARKKIPYINGPTDKTMGIKLEAFIFDIFRYAKNVLILEVDREDE 406 (482)
T ss_pred CeecccccceEEEEEEHHHHHHHhhhhhhhcCCceeeccccCeeCCCCCCcceeeehhhhhhHHHhccccceeeechhhc
Confidence 44456677999999999999998763 223699999999997 368999999999999999999999999995
Q ss_pred eeeccCCCc-----hhHHhhhhhccccCeeEecCC
Q 019770 223 FLPVKATSD-----LLLVQSDLYTLADGFVTRNEA 252 (336)
Q Consensus 223 F~PVKn~~d-----ll~~~sd~y~~~~g~~~~~~~ 252 (336)
|+||||+.+ ..++|.+++.++..|+..++.
T Consensus 407 FsPlKNa~g~~~d~p~tar~~l~~~~~~wl~~ag~ 441 (482)
T PTZ00339 407 FAPIKNADGAAADTILNAQKLLLSLHTRWLEAALE 441 (482)
T ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Confidence 999999864 468999999888877766665
No 10
>cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose. UGGPase: UDP-Galactose/Glucose Pyrophosphorylase catalyzes the reversible production of UDP-Glucose/UDP-Galactose and pyrophosphate (PPi) from Glucose-1-phosphate/Galactose-1-phosphate and UTP. Its dual substrate specificity distinguishes it from the single substrate enzyme UDP-glucose pyrophosphorylase. It may play a key role in the galactose metabolism in raffinose oligosaccharide (RFO) metabolizing plants. RFO raffinose is a major photoassimilate and is a galactosylderivative of sucrose (Suc) containing a galactose (Gal) moiety. Upon arriving at the sink tissue, the Gal moieties of the RFOs are initially removed by alpha-galactosidase and then are phosphorylated to Gal-1-P. Gal-1-P is converted to UDP-Gal. The UDP-Gal is further metabolized to UDP-Glc via an epimerase reaction. The UDP-Glc can be directly utilized in cell wall metabolism or in Suc synthesis. However, for the Suc synthesis UDP-Glc must be f
Probab=100.00 E-value=2.2e-59 Score=449.40 Aligned_cols=225 Identities=24% Similarity=0.193 Sum_probs=201.0
Q ss_pred CCCcCchHHHHHHHHHcCCCCc---eeEEEecCCceeee-cCCCcc--cCCCCCCCCcccCCCCCccchhhhhhcChHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNV---EIHTFNQSQYPRLC-ADDFVP--LPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDA 74 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl---~v~~F~Q~~~P~l~-~~~~~~--~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~ 74 (336)
|||+.||++|++||++|+|||+ +|++|+|+++||++ .+|+++ ++++ ++++|+|+||||+|+||++||+||+
T Consensus 61 MTS~~Th~~T~~~fe~n~yFGl~~~~V~fF~Q~~~P~l~~~~g~l~~~l~~~---~~i~~~P~GhGdiy~aL~~sGlLd~ 137 (315)
T cd06424 61 MTSDDTHSKTLKLLEENNYFGLEKDQVHILKQEKVFCLIDNDAHLALDPDNT---YSILTKPHGHGDVHTLLYNSGLLKK 137 (315)
T ss_pred ECCCchhHHHHHHHHHCCccCCCcccEEEEecCceEEEecCCCCcccccCCC---CccccCCCCchHHHHHHHHCCcHHH
Confidence 9999999999999999999999 49999999999997 688875 3333 7899999999999999999999999
Q ss_pred HHHcCceEEEEEeCcc-ccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe---eCCeEEE--EEeecCChhhhh
Q 019770 75 LISQGKEYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS---YEGKVQL--LEIAQVPDEHVN 148 (336)
Q Consensus 75 l~~~G~~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~---~~g~~~~--vEysqlp~~~~~ 148 (336)
|+++|+||++++|||| |++++||.++||+++++++++++||+|. +.|++|++|+ .+|++++ |||+|++++.++
T Consensus 138 l~~~Gikyi~v~~vdN~L~~~adP~fiG~~~~~~~d~~~k~v~~~-~~E~vG~~~~~~~~~g~~~v~nvEYsel~~~~~~ 216 (315)
T cd06424 138 WIEAGYKWLVFFQDTNALAFKAIPAVLGVSATKSLDMNSLTVPRK-PKEAIGALCKLTKNNGKSMTINVEYNQLDPLLRA 216 (315)
T ss_pred HHHCCCEEEEEEecchhhhhccChhhEEEEecCCCceEeEEEeCC-CCCceeeEEEEecCCCceEEEEEEeecCCHHHHh
Confidence 9999999999999999 9999999999999999999999999965 5799999997 6788876 999999988766
Q ss_pred hhcc------cCCccee--eeeeEEEEHHHHHHHHHhcCcCcceeecccccCCC-----CceehhhhhchHHhh---ccc
Q 019770 149 EFKS------IEKFKIF--NTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGI-----KVLQLETAAGAAIRF---FDH 212 (336)
Q Consensus 149 ~~~~------~~~~~~f--ntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~-----~~~qlE~~~~d~~~~---~~~ 212 (336)
...+ .+++++| |||+|+|+|++|.++++.....+|+|+|+|+.|+. +++||||||||++++ ..+
T Consensus 217 ~~~~~g~~~~~~~~s~f~gNi~~~~f~l~~~~~~l~~~~~~~~~~~n~ky~d~~~~~~~~p~rlE~~m~D~~~~f~~~~~ 296 (315)
T cd06424 217 SGKDDGDVDDKTGFSPFPGNINQLVFSLGPYMDELEKTKGAIPEFINPKYKDATKTAFKSPTRLECMMQDIPLLFEEDYR 296 (315)
T ss_pred cCCCCCCcccccccccCCCeeeeEEEeHHHHHHHHhhccccCeeeecCCcccCCCCeecCchHHHHHHHHHHHhhcccce
Confidence 4322 3446666 99999999999999998765579999999999843 468999999999777 578
Q ss_pred ceEEEEeccc-eeeccCC
Q 019770 213 AIGCNVHRSR-FLPVKAT 229 (336)
Q Consensus 213 ~~~i~V~R~r-F~PVKn~ 229 (336)
+.+++|+|+. ||||||.
T Consensus 297 ~~~~~~~r~~~fsP~KN~ 314 (315)
T cd06424 297 VGFTVLDRWLCFSPVKNN 314 (315)
T ss_pred eEEEEEchhhcccccCCC
Confidence 9999999995 9999995
No 11
>cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes. This family includes UDP-Glucose Pyrophosphorylase (UDPase) and UDPGlcNAc pyrophosphorylase enzymes. The two enzymes share significant sequence and structure similarity. UDP-Glucose Pyrophosphorylase catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from Glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans . UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1P from PPi and UDPGlcNAc, which is a key precursor of N- and O-linked glycosylations and is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker anchoring a variety o
Probab=100.00 E-value=3.4e-53 Score=400.20 Aligned_cols=197 Identities=37% Similarity=0.468 Sum_probs=182.0
Q ss_pred CCCcCchHHHHHHHHHcCCCCceeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHHcCc
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGK 80 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~~G~ 80 (336)
|||+.||++|++||++|+...-++++|+|+++|+++.+|+..++.+ ++++|+|+||||+|.+|+.||+|++|+++|+
T Consensus 59 mts~~t~~~t~~~l~~~~~~~~~v~~f~Q~~~P~~~~~~~~~~~~~---~~~~~~P~GnGdi~~~L~~sglLd~l~~~G~ 135 (266)
T cd04180 59 MNSKYTHEKTQCYFEKINQKNSYVITFMQGKLPLKNDDDARDPHNK---TKCHLFPCGHGDVVLALIHSGHLNKLLEKGY 135 (266)
T ss_pred EcCchhHHHHHHHHHHcCCCCCceEEEEeCCceEEeCCCCcccCCC---CceeeccCCcHHHHHHHHHCChHHHHHHcCC
Confidence 9999999999999999994445699999999999999998866554 6789999999999999999999999999999
Q ss_pred eEEEEEeCcc-ccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeC-CeEEEEEeecCChhhhhh--------h
Q 019770 81 EYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYE-GKVQLLEIAQVPDEHVNE--------F 150 (336)
Q Consensus 81 ~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~-g~~~~vEysqlp~~~~~~--------~ 150 (336)
+|++|+|+|| |+.++||.++||++.++++++++||+|+.+|+|||++|.++ |+++++||+|+|++++++ +
T Consensus 136 ~yi~v~~vDN~la~v~DP~~lG~~~~~~~~~~~kvv~K~~~d~k~G~~~~~~~g~~~~vEyse~~~~~~~~~~~~~~~~~ 215 (266)
T cd04180 136 RYIHFIGVDNLLVKVADPLFIGIAIQNRKAINQKVVPKTRNEESGGYRIANINGRVQLLEYDQIKKLLKQKMVNNQIPKD 215 (266)
T ss_pred EEEEEEccCccCccccCHHHHHHHHHcCCCEEEEEEECCCCCCeEEEEEEecCCCEEEEEeccCCHHHHhccccccCcCC
Confidence 9999999999 66666999999999999999999999999999999999988 999999999999998776 4
Q ss_pred cccCCcceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhcccceEEEEecc-ceeeccC
Q 019770 151 KSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRS-RFLPVKA 228 (336)
Q Consensus 151 ~~~~~~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~~~~~~i~V~R~-rF~PVKn 228 (336)
++.-.|.+||||||||+|++|+++++ |+|++|+++.+++|+|+ ||+||||
T Consensus 216 ~~~~~~~~~n~~~~~~~l~~l~~~~~----------------------------d~~~~~~~~~~~~v~r~~~F~PvKn 266 (266)
T cd04180 216 IDDAPFFLFNTNNLINFLVEFKDRVD----------------------------DIIEFTDDIVGVMVHRAEEFAPVKN 266 (266)
T ss_pred CCceeeccceEEEEEEEHHHHHHHHH----------------------------HHHhccCceEEEEeCchhccccCCC
Confidence 55556777899999999999999984 99999999999999999 7999998
No 12
>KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=7.3e-51 Score=401.35 Aligned_cols=272 Identities=19% Similarity=0.206 Sum_probs=237.6
Q ss_pred CCCcCchHHHHHHHHHcCCCCce---eEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVE---IHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALIS 77 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~---v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~ 77 (336)
|||..|++.|++||+.|+|||+. |++|+|+++||++.+|+.+++++ .+++++|+|||++|.|+..+ |++|.+
T Consensus 160 mtS~~T~e~T~~~f~~~~~FGl~~~qv~~f~Q~~l~c~~~~gk~~le~k---~~~a~ap~gngg~y~ai~~~--l~dm~~ 234 (477)
T KOG2388|consen 160 MTSAFTHEATLEYFESHKYFGLKPEQVTFFQQGKLPCLDLDGKFILEQK---NSLAAAPDGNGGLYRAIKDQ--LEDMAA 234 (477)
T ss_pred ecCCCccHHhHhHHhhcCCCCCChhHeeeeecccccccccCCceeccCc---cchhcCCCCCcHHHHHHHhh--hhHHHh
Confidence 99999999999999999999995 99999999999999999888877 79999999999999999998 999999
Q ss_pred cCceEEEEEeCcc-ccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeC-CeEEEEEeecCChhhhhhhccc-C
Q 019770 78 QGKEYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYE-GKVQLLEIAQVPDEHVNEFKSI-E 154 (336)
Q Consensus 78 ~G~~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~-g~~~~vEysqlp~~~~~~~~~~-~ 154 (336)
+|++|++++|||| |.+.+||.|+||++.+++++++++|+|..+.|.+|++|..+ |++++|||||+.++.+...... +
T Consensus 235 rgi~~~hiy~VdnvL~k~aDP~fiG~~it~~~d~~~k~V~k~~p~E~vG~~~~~~~G~~~vvEYsEi~~~~a~~~~~d~g 314 (477)
T KOG2388|consen 235 RGIFYDHIYCVDNVLLKVADPVFIGFSITKEADVAAKVVPKINPGEVVGIVALKGQGTPLVVEYSELDAELAKAKAPDGG 314 (477)
T ss_pred hcccEEEEEEecceeeEecccceeeEEeechhhHhhhhccccCCCCceEEEEecCCCceeEEEecccCHHHHhhcccccC
Confidence 9999999999999 99999999999999999999999999999999999999988 9999999999999887776666 7
Q ss_pred Cccee--eeeeEEEEHHHHHHHHHhcCcCcceeecccccC------------CCCceehhhhhchHHhhcccceEEEEec
Q 019770 155 KFKIF--NTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD------------GIKVLQLETAAGAAIRFFDHAIGCNVHR 220 (336)
Q Consensus 155 ~~~~f--ntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~------------~~~~~qlE~~~~d~~~~~~~~~~i~V~R 220 (336)
++.++ |+|||+|.++||+++.....-.||+|++.|+++ .||+|++|+|+||+|++.+++.+++|+|
T Consensus 315 ~l~~~agnI~nh~ft~dFLkk~~~~~~~~lp~H~a~kKip~~~~~g~~~kP~kpnGik~E~fifdvf~~~k~f~~meV~R 394 (477)
T KOG2388|consen 315 RLLFNAGNICNHFFTLDFLKKVTRASVPLLPYHKAEKKIPYVDSTGKLVKPTKPNGIKLEQFIFDVFPSAKKFGLMEVPR 394 (477)
T ss_pred ccccCCccHHHHHHhhHHHHHhhhcccccchhhhhhccccccccCCcccCCCCCCceeEEeeeeeecccccceeEEecch
Confidence 88876 888999999999999876544589999999996 4789999999999999999999999999
Q ss_pred cc-eeeccCCCc-----hhHHhhhhhccccCeeEecCCcCCCCCCeEEeCCC--ccc--HHHHhhhc
Q 019770 221 SR-FLPVKATSD-----LLLVQSDLYTLADGFVTRNEARKNPANPTIELGPE--FKK--VGNFLSRF 277 (336)
Q Consensus 221 ~r-F~PVKn~~d-----ll~~~sd~y~~~~g~~~~~~~r~~~~~P~I~L~~~--f~~--~~~~~~r~ 277 (336)
+. |+|+||... ..++|.++-.++.-|+..+.....+..-.++++|. |+. ++.+...+
T Consensus 395 e~efSPlKng~~~~~D~p~T~~~~~l~~h~~wi~~~g~~f~~~~~~~evs~~vsy~GE~lEs~~~g~ 461 (477)
T KOG2388|consen 395 EEEFSPLKNGGKSSTDNPSTARIALLRLHIRWIEKAGGIFSDAEAVVEVSPLVSYAGENLESVPSGF 461 (477)
T ss_pred hhhcCccccCCCCCCCChhHHHHHHHHhhhhehhccCcEEecCcceEEecceeeecccchhhccccc
Confidence 95 999999753 56889888777776666555542221124555554 433 45554433
No 13
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]
Probab=97.25 E-value=0.015 Score=58.60 Aligned_cols=220 Identities=16% Similarity=0.141 Sum_probs=139.7
Q ss_pred CCCCCccchhhhhhcChHHHHHHcCce-EEEEEeCcc-ccccccH-HHHHHHHhcCCceeEEeeecccCCcceeEEEeeC
Q 019770 55 YPPGHGDVFPSLMNSGKLDALISQGKE-YVFAANSDN-LGAIVDL-KILNHLIQNKNEYCMEVTPKTLADVKGGTLISYE 131 (336)
Q Consensus 55 ~P~GhGdi~~aL~~sGlld~l~~~G~~-yi~v~nvDN-L~~~~Dp-~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~ 131 (336)
-|-|-|....+. ...+.++++ .+.|.+-|= |...--. .++.++..++.....-++.-.+|.-=|-+++..+
T Consensus 76 eqlGTgHAV~~a------~~~l~~~~~g~vLVl~GD~PLit~~TL~~L~~~~~~~~~~~tvLt~~~~dP~GYGRIvr~~~ 149 (460)
T COG1207 76 EQLGTGHAVLQA------LPALADDYDGDVLVLYGDVPLITAETLEELLAAHPAHGAAATVLTAELDDPTGYGRIVRDGN 149 (460)
T ss_pred ccCChHHHHHhh------hhhhhcCCCCcEEEEeCCcccCCHHHHHHHHHhhhhcCCceEEEEEEcCCCCCcceEEEcCC
Confidence 355665443332 233445666 788888888 6544333 4888888888898888887777755555444456
Q ss_pred Ce-EEEEEeecCChhhhhhhcccCCcceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc
Q 019770 132 GK-VQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF 210 (336)
Q Consensus 132 g~-~~~vEysqlp~~~~~~~~~~~~~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~ 210 (336)
|+ ..+||--+..+++.. -+..|+..++|+-++|.+.|.+- +.+-.|=|--+-|++.++
T Consensus 150 g~V~~IVE~KDA~~eek~-------I~eiNtGiy~f~~~~L~~~L~~l--------------~nnNaqgEYYLTDvI~i~ 208 (460)
T COG1207 150 GEVTAIVEEKDASEEEKQ-------IKEINTGIYAFDGAALLRALPKL--------------SNNNAQGEYYLTDVIAIA 208 (460)
T ss_pred CcEEEEEEcCCCCHHHhc-------CcEEeeeEEEEcHHHHHHHHHHh--------------ccccccCcEeHHHHHHHH
Confidence 66 569998888877643 45689999999999999988641 234566788889999998
Q ss_pred c----cceEEEEecc-ceeeccCCCchhHH------hhhhhccccCeeEecCCcCCCCCCeEEeCCCcccHHHHhhhcCC
Q 019770 211 D----HAIGCNVHRS-RFLPVKATSDLLLV------QSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKS 279 (336)
Q Consensus 211 ~----~~~~i~V~R~-rF~PVKn~~dll~~------~sd~y~~~~g~~~~~~~r~~~~~P~I~L~~~f~~~~~~~~r~~~ 279 (336)
. ...++.++.. +++=|.+--.|..+ |..-+.+.+|....+|++.+ ++
T Consensus 209 ~~~g~~V~a~~~~d~~E~~GVN~R~qLa~~e~~~q~r~~~~~m~~GVtl~dP~t~~-------i~--------------- 266 (460)
T COG1207 209 RNEGEKVRAVHVDDEEEVLGVNDRVQLAEAERIMQRRIAEKLMLAGVTLIDPATTY-------IR--------------- 266 (460)
T ss_pred HhCCCeEEEEecCchHHhcCcCcHHHHHHHHHHHHHHHHHHHHHcCcEEeCCCeEE-------Ec---------------
Confidence 5 4557777755 48888776655433 33334455566665665432 11
Q ss_pred CCCccccceEEEecceEEccCeEEEEEEEEEcCCCCeEEcCCCCeeecceeeCCC
Q 019770 280 IPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPG 334 (336)
Q Consensus 280 ~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l~n~~~~~~~ 334 (336)
..+++..||..-.+|.|+|.++| |..++|-+|++|+|..|..+.
T Consensus 267 -------~dv~ig~DvvI~p~v~l~G~t~i----g~~v~iGpg~~i~ds~I~~~a 310 (460)
T COG1207 267 -------GDVEIGRDVVIEPNVILEGNTVI----GDNVVIGPGSVIKDSVIGDNA 310 (460)
T ss_pred -------CcEEECCceEEecCcEEeeeEEE----CCceEECCCcEEEeeEEcCCC
Confidence 12344455555555555666555 334456666666666665443
No 14
>PF14134 DUF4301: Domain of unknown function (DUF4301)
Probab=96.55 E-value=0.016 Score=59.39 Aligned_cols=194 Identities=24% Similarity=0.275 Sum_probs=107.0
Q ss_pred CCc--eeEEEecCCc---eeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHHcCceEEEEEeCcccc-c
Q 019770 20 SNV--EIHTFNQSQY---PRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLG-A 93 (336)
Q Consensus 20 fgl--~v~~F~Q~~~---P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~~G~~yi~v~nvDNL~-~ 93 (336)
+|+ +|.|=.|..- .+++.++.....+. +++..-|.|||-+ ++.|-+.--.-|||=|+||.+ .
T Consensus 230 ~~v~f~IsfS~Qk~sTDTIAv~~dN~pFR~~d---G~LlFRPgGHGAL---------ieNLN~ldaDiIFIKNIDNVvpd 297 (513)
T PF14134_consen 230 YGVKFEISFSEQKPSTDTIAVDPDNTPFRNED---GSLLFRPGGHGAL---------IENLNDLDADIIFIKNIDNVVPD 297 (513)
T ss_pred hCceEEEEecccCCCCCeeEECCCCCccCCCC---CCEEeCCCcchHH---------HhhhccccCCEEEEeCccccCCc
Confidence 555 4776667643 56777765555433 8999999999964 444555677889999999943 2
Q ss_pred cccH-------HHHHHHHh-------------cC----------------------------------CceeEEee----
Q 019770 94 IVDL-------KILNHLIQ-------------NK----------------------------------NEYCMEVT---- 115 (336)
Q Consensus 94 ~~Dp-------~~lg~~~~-------------~~----------------------------------~~~~~evv---- 115 (336)
..-. .+-|.+++ ++ +++..+..
T Consensus 298 ~~k~~t~~yKk~LaG~L~~lQ~~~F~yl~~L~~~~~~~~~l~ei~~Fl~~~L~~~~~~~~~~~~~~~~~~yL~~kLnRPi 377 (513)
T PF14134_consen 298 RLKEETVKYKKILAGKLLELQEKIFKYLKLLDKGKYSEEELEEIKDFLEEELNIKLPDDFKKLSDEEKIEYLKEKLNRPI 377 (513)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhCCCCcHHHHhhCHHHHHHHHHHHcCCCc
Confidence 2211 11121111 00 00000101
Q ss_pred -----ecccCCcceeEEEe---eCCe--EEEEEeecCCh---hhhhhhcccCCcceeeeeeEEEEHHHHHHHHHhcCcCc
Q 019770 116 -----PKTLADVKGGTLIS---YEGK--VQLLEIAQVPD---EHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKM 182 (336)
Q Consensus 116 -----~k~~~dekgG~l~~---~~g~--~~~vEysqlp~---~~~~~~~~~~~~~~fntnni~~~l~~l~~~~~~~~~~l 182 (336)
-|. ..|.||--=. .+|. ++++|-||+.. +.++-|+..+ -||---|...+.-++- ....|
T Consensus 378 RVCGMVkN-eGEPGGGPFwv~~~dG~~SLQIvEssQId~~~~~q~~if~~~T---HFNPVDLVCgvkdykG----~kFdL 449 (513)
T PF14134_consen 378 RVCGMVKN-EGEPGGGPFWVKNEDGTVSLQIVESSQIDMSNPEQKEIFKNST---HFNPVDLVCGVKDYKG----EKFDL 449 (513)
T ss_pred eeeecccc-CCCCCCCCeEEECCCCCEeeeeehhhhcCCCCHHHHHHHHcCC---CCCccceEeeccCCCC----CcCCc
Confidence 111 2455554322 3674 78999999954 4444444322 2555445555554431 23567
Q ss_pred ceeeccccc-------CCCCceehhh--hhchHHhhcccceEEEEeccceeeccCCCchhH
Q 019770 183 EIIPNPKEV-------DGIKVLQLET--AAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLL 234 (336)
Q Consensus 183 p~~vn~K~v-------~~~~~~qlE~--~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~ 234 (336)
+-++.+++- +++..=-||. .+--+...- +.+++|||-.-|.|||+-+|||-
T Consensus 450 ~~fvD~~tgFIs~KSk~Gk~LKAlELPGLWNGaMa~W-nTvFVEVPl~TFNPVKTVnDLLr 509 (513)
T PF14134_consen 450 PDFVDPNTGFISEKSKNGKELKALELPGLWNGAMADW-NTVFVEVPLITFNPVKTVNDLLR 509 (513)
T ss_pred hhccCCCCceeeecCCCCccchhhccCCcccchhcCC-ceEEEEeccccCCCccchhhhcc
Confidence 766666553 3322111332 111111111 57899999999999999999874
No 15
>COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism]
Probab=95.93 E-value=0.0027 Score=64.51 Aligned_cols=73 Identities=15% Similarity=0.046 Sum_probs=50.1
Q ss_pred eeeeEEEEHHHHHHHHHhc------CcCccee---ecccccCCCCceehhh-hh-chHHhhc--ccceEEEEeccc-eee
Q 019770 160 NTNNLWVNLKAIKRLVEAD------ALKMEII---PNPKEVDGIKVLQLET-AA-GAAIRFF--DHAIGCNVHRSR-FLP 225 (336)
Q Consensus 160 ntnni~~~l~~l~~~~~~~------~~~lp~~---vn~K~v~~~~~~qlE~-~~-~d~~~~~--~~~~~i~V~R~r-F~P 225 (336)
|+-++++.+++|.+..... .-.+|.. ....+--++++++||. || +|.|.+- ++..++.|||.+ |+|
T Consensus 323 ni~l~~~~~~~l~~~~~l~Lpi~~a~Kki~~~~~~~~~~t~i~~~i~kfe~~FI~fDlF~~~s~~~~~~~~vpR~~~f~P 402 (472)
T COG4284 323 NIWLHLFSVKFLKEAAYLNLPIHKAIKKIPQLDNIIQLTTAIGKNISKFENEFIPFDLFLYKSDENGGLLLVPRFGEFSP 402 (472)
T ss_pred cceeehhHHHHHHhhhccCCcchhhhcccCccccceeeccccccchhhccccccceeeeEEEecCCCceEeccccCCCCc
Confidence 4444666666666554321 0123332 1222212789999996 99 9999998 999999999996 999
Q ss_pred ccCCCch
Q 019770 226 VKATSDL 232 (336)
Q Consensus 226 VKn~~dl 232 (336)
+||..+.
T Consensus 403 lkn~~~~ 409 (472)
T COG4284 403 LKNLEGS 409 (472)
T ss_pred hhhccCC
Confidence 9998764
No 16
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=93.81 E-value=3.8 Score=40.30 Aligned_cols=140 Identities=14% Similarity=0.147 Sum_probs=80.1
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeec-ccCCcceeEEEee-CCeEEEEEeecCChhhhhhhcccCCcc
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPK-TLADVKGGTLISY-EGKVQLLEIAQVPDEHVNEFKSIEKFK 157 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k-~~~dekgG~l~~~-~g~~~~vEysqlp~~~~~~~~~~~~~~ 157 (336)
-++++|.+.|++...---.++-++..++++..+-+..- .....+-|++... +|+ +.++.+-|... .-.
T Consensus 117 ~~~~lV~~gD~l~~~d~~~ll~~h~~~~~~~tl~~~~~~~~~~~~yG~v~~d~~g~--V~~~~eKp~~~--------~~~ 186 (380)
T PRK05293 117 PEYVLILSGDHIYKMDYDKMLDYHKEKEADVTIAVIEVPWEEASRFGIMNTDENMR--IVEFEEKPKNP--------KSN 186 (380)
T ss_pred CCEEEEecCCEEEcCCHHHHHHHHHhcCCCEEEEEEEcchhhccccCEEEECCCCc--EEEEEeCCCCC--------Ccc
Confidence 47899999999543221456677777778755443221 1223456776543 444 44555555321 112
Q ss_pred eeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc-cc---ceEEEEeccceeeccCCCchh
Q 019770 158 IFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF-DH---AIGCNVHRSRFLPVKATSDLL 233 (336)
Q Consensus 158 ~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~-~~---~~~i~V~R~rF~PVKn~~dll 233 (336)
+.|+....|+-+.+.+.++... ....+.+.+..|+++.+ ++ ..++.++ ..|.-+-+.+|++
T Consensus 187 ~~~~Giyi~~~~~l~~~l~~~~--------------~~~~~~~~~~~d~i~~l~~~~~~v~~~~~~-g~w~digt~~~~~ 251 (380)
T PRK05293 187 LASMGIYIFNWKRLKEYLIEDE--------------KNPNSSHDFGKNVIPLYLEEGEKLYAYPFK-GYWKDVGTIESLW 251 (380)
T ss_pred eeeeEEEEEcHHHHHHHHHHHh--------------hcCCchhhhHHHHHHHHhhcCCeEEEEEeC-CEEEeCCCHHHHH
Confidence 4577777788887877664311 01123455666777654 22 3344443 2588899999988
Q ss_pred HHhhhhhcccc
Q 019770 234 LVQSDLYTLAD 244 (336)
Q Consensus 234 ~~~sd~y~~~~ 244 (336)
.++.++.....
T Consensus 252 ~a~~~~l~~~~ 262 (380)
T PRK05293 252 EANMELLRPEN 262 (380)
T ss_pred HHHHHHcCCCc
Confidence 77777654443
No 17
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=93.64 E-value=8.4 Score=38.37 Aligned_cols=133 Identities=20% Similarity=0.212 Sum_probs=76.3
Q ss_pred ceEEEEEeCcc-ccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeE-EEEEeecCChhhhhhhcccCCcc
Q 019770 80 KEYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKV-QLLEIAQVPDEHVNEFKSIEKFK 157 (336)
Q Consensus 80 ~~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~-~~vEysqlp~~~~~~~~~~~~~~ 157 (336)
-+++++.+.|+ + .++..+-.+.+.+.+..+-+++...+.. -|.+...+|++ .++|....+.++ ....
T Consensus 93 ~d~vlv~~gD~p~---~~~~~l~~l~~~~~~~~v~~~~~~~~~~-~g~v~~d~g~v~~i~e~~~~~~~~-------~~~~ 161 (430)
T PRK14359 93 HERVLILNGDMPL---VEKDELEKLLENDADIVMSVFHLADPKG-YGRVVIENGQVKKIVEQKDANEEE-------LKIK 161 (430)
T ss_pred CCeEEEEECCccC---CCHHHHHHHHhCCCCEEEEEEEcCCCcc-CcEEEEcCCeEEEEEECCCCCccc-------ccce
Confidence 57899999999 5 3567777777777776666655444333 45555456653 244443322111 0122
Q ss_pred eeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc----ccceEEEEeccceeeccCCCchh
Q 019770 158 IFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF----DHAIGCNVHRSRFLPVKATSDLL 233 (336)
Q Consensus 158 ~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~----~~~~~i~V~R~rF~PVKn~~dll 233 (336)
..|+.-.+|+-+.+++.++.-.. +..+-|-.+-|+++.+ .+..+++++...|.=|-+.+|++
T Consensus 162 ~~~~Giyif~~~~l~~~~~~~~~--------------~~~~~e~~l~d~i~~l~~~g~~v~~~~~~~~~w~dI~t~~dl~ 227 (430)
T PRK14359 162 SVNAGVYLFDRKLLEEYLPLLKN--------------QNAQKEYYLTDIIALAIEKGETIKAVFVDEENFMGVNSKFELA 227 (430)
T ss_pred EEEeEEEEEEHHHHHHHHHhcCc--------------ccccCceehhhHHHHHHHcCCeEEEEEcCCCEEeCCCCHHHHH
Confidence 45777777898888877643110 0011222333555443 23456677655688888888887
Q ss_pred HHhh
Q 019770 234 LVQS 237 (336)
Q Consensus 234 ~~~s 237 (336)
.++.
T Consensus 228 ~a~~ 231 (430)
T PRK14359 228 KAEE 231 (430)
T ss_pred HHHH
Confidence 6643
No 18
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=91.74 E-value=8.1 Score=38.65 Aligned_cols=162 Identities=14% Similarity=0.128 Sum_probs=84.0
Q ss_pred CCCCccchhhhhhcChHHHHHHcCceEEEEEeCcccccccc-HHHHHHHHhcCCceeEEeeec-ccCCcceeEEEee-CC
Q 019770 56 PPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVD-LKILNHLIQNKNEYCMEVTPK-TLADVKGGTLISY-EG 132 (336)
Q Consensus 56 P~GhGdi~~aL~~sGlld~l~~~G~~yi~v~nvDNL~~~~D-p~~lg~~~~~~~~~~~evv~k-~~~dekgG~l~~~-~g 132 (336)
|-|.||-.... ++.+....-+|+++.+.|++.. .| -.++-+|..+++++.+-+... ...-..-|++... +|
T Consensus 98 ~lGta~al~~a-----~~~i~~~~~~~~lv~~gD~v~~-~dl~~l~~~h~~~~~~~ti~~~~~~~~~~~~~Gvv~~d~~g 171 (407)
T PRK00844 98 YLGSADAIYQS-----LNLIEDEDPDYVVVFGADHVYR-MDPRQMVDFHIESGAGVTVAAIRVPREEASAFGVIEVDPDG 171 (407)
T ss_pred ccCCHHHHHHH-----HHHHHhcCCCEEEEecCCEEEc-CCHHHHHHHHHhcCCcEEEEEEecchHHcccCCEEEECCCC
Confidence 45665543222 2333333447899999999643 34 466788888888866554321 1222456776553 45
Q ss_pred eEEEEEeecCChhhhhhhcccCCcceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhcc-
Q 019770 133 KVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFD- 211 (336)
Q Consensus 133 ~~~~vEysqlp~~~~~~~~~~~~~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~~- 211 (336)
+ +.++.+-|......+ ...+..+.|+....|+-+.|.+.++.... ... +-+.+..|+++.+-
T Consensus 172 ~--v~~~~eKp~~~~~~~-~~~~~~~~~~Giyi~~~~~l~~~l~~~~~-----------~~~---~~~~~~~dii~~l~~ 234 (407)
T PRK00844 172 R--IRGFLEKPADPPGLP-DDPDEALASMGNYVFTTDALVDALRRDAA-----------DED---SSHDMGGDIIPRLVE 234 (407)
T ss_pred C--EEEEEECCCCccccc-CCCCCcEEEeEEEEEeHHHHHHHHHHhhc-----------CCc---ccccchhhHHHHHhc
Confidence 4 334444443321111 11123456888778898887666643110 000 11223345665442
Q ss_pred --cceEEEEe-----------ccceeeccCCCchhHHhhhhh
Q 019770 212 --HAIGCNVH-----------RSRFLPVKATSDLLLVQSDLY 240 (336)
Q Consensus 212 --~~~~i~V~-----------R~rF~PVKn~~dll~~~sd~y 240 (336)
+..+++.+ +..|.-+-+..+++.+..++-
T Consensus 235 ~~~v~~~~~~~~~~~g~n~~~~g~w~Digt~~~y~~a~~~lL 276 (407)
T PRK00844 235 RGRAYVYDFSTNEVPGATERDRGYWRDVGTIDAYYDAHMDLL 276 (407)
T ss_pred cCeEEEEEcccccccccccCCCCEEEECCCHHHHHHHHHHHh
Confidence 12233322 223788888888876666654
No 19
>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism]
Probab=91.71 E-value=14 Score=37.38 Aligned_cols=144 Identities=17% Similarity=0.210 Sum_probs=88.7
Q ss_pred eEEEecCCceeeecC--CCcccCCCCCCCCcccCCC----CCccchh----hhhhcChHHHHHHcCceEEEEEeCccccc
Q 019770 24 IHTFNQSQYPRLCAD--DFVPLPCKGKTDKDGWYPP----GHGDVFP----SLMNSGKLDALISQGKEYVFAANSDNLGA 93 (336)
Q Consensus 24 v~~F~Q~~~P~l~~~--~~~~~~~~~~~~~~~~~P~----GhGdi~~----aL~~sGlld~l~~~G~~yi~v~nvDNL~~ 93 (336)
|..+.|-+-=.|... ...+...+.-.+-+..-|+ ++...|. |.+++ +..+.+.+-+|+.+.+.|=+.+
T Consensus 55 I~VltQy~~~SL~~Hi~~G~~w~l~~~~~~v~ilp~~~~~~~~~wy~Gtadai~Qn--l~~i~~~~~eyvlIlsgDhIYk 132 (393)
T COG0448 55 IGVLTQYKSHSLNDHIGRGWPWDLDRKNGGVFILPAQQREGGERWYEGTADAIYQN--LLIIRRSDPEYVLILSGDHIYK 132 (393)
T ss_pred EEEEeccchhHHHHHhhCCCccccccccCcEEEeCchhccCCCcceeccHHHHHHh--HHHHHhcCCCEEEEecCCEEEe
Confidence 777777665555442 1111111111133445554 3333343 55554 5556678999999999999776
Q ss_pred cccHHHHHHHHhcCCceeEEee--ecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcceeeeeeEEEEHHHH
Q 019770 94 IVDLKILNHLIQNKNEYCMEVT--PKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAI 171 (336)
Q Consensus 94 ~~Dp~~lg~~~~~~~~~~~evv--~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~fntnni~~~l~~l 171 (336)
.==-.+|-+|.+.++++.+-|. |+..+.+ -| +.+.|..-.++|+.|-|.+... ...+-...+..|+-+.|
T Consensus 133 mDy~~ml~~H~~~gadiTv~~~~Vp~~eas~-fG-im~~D~~~~i~~F~eKp~~~~~------~~~laSMgiYIf~~~~L 204 (393)
T COG0448 133 MDYSDMLDFHIESGADVTVAVKEVPREEASR-FG-VMNVDENGRIIEFVEKPADGPP------SNSLASMGIYIFNTDLL 204 (393)
T ss_pred cCHHHHHHHHHHcCCCEEEEEEECChHhhhh-cC-ceEECCCCCEEeeeeccCcCCc------ccceeeeeeEEEcHHHH
Confidence 6447899999999999876554 5555444 34 4456666677888888877211 11123345566799999
Q ss_pred HHHHHh
Q 019770 172 KRLVEA 177 (336)
Q Consensus 172 ~~~~~~ 177 (336)
.++|++
T Consensus 205 ~~~L~~ 210 (393)
T COG0448 205 KELLEE 210 (393)
T ss_pred HHHHHH
Confidence 999975
No 20
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=90.63 E-value=13 Score=37.34 Aligned_cols=89 Identities=16% Similarity=0.154 Sum_probs=56.4
Q ss_pred ceEEEEEeCcc-cccccc-HHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcc
Q 019770 80 KEYVFAANSDN-LGAIVD-LKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFK 157 (336)
Q Consensus 80 ~~yi~v~nvDN-L~~~~D-p~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~ 157 (336)
-+++++.+.|+ +....| -.++-++.++++++.+-+++-..+ ..-|.+...+|+...+|...-+.+. ....
T Consensus 89 ~~~vlv~~gD~p~i~~~~i~~l~~~~~~~~~d~ti~~~~~~~~-~~~g~v~~d~g~v~~~e~~~~~~~~-------~~~~ 160 (448)
T PRK14357 89 GDDLLILYGDVPLISENTLKRLIEEHNRKGADVTILVADLEDP-TGYGRIIRDGGKYRIVEDKDAPEEE-------KKIK 160 (448)
T ss_pred CCeEEEEeCCcccCCHHHHHHHHHHHHhcCCeEEEEEEEcCCC-CCcEEEEEcCCeEEEEECCCCChHH-------hcCc
Confidence 47899999999 655445 345667777788887766654443 3456665557777667754322211 1112
Q ss_pred eeeeeeEEEEHHHHHHHHH
Q 019770 158 IFNTNNLWVNLKAIKRLVE 176 (336)
Q Consensus 158 ~fntnni~~~l~~l~~~~~ 176 (336)
..|+...+|+-+.|.++++
T Consensus 161 ~~~~GiYv~~~~~l~~~~~ 179 (448)
T PRK14357 161 EINTGIYVFSGDFLLEVLP 179 (448)
T ss_pred EEEeEEEEEEHHHHHHHHH
Confidence 4688878889887777664
No 21
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=90.55 E-value=8.8 Score=38.74 Aligned_cols=162 Identities=13% Similarity=0.105 Sum_probs=84.4
Q ss_pred CCCCCccchhhhhhcChHHHHHHcCceEEEEEeCcccccccc-HHHHHHHHhcCCceeEEeeecc-cCCcceeEEEee-C
Q 019770 55 YPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVD-LKILNHLIQNKNEYCMEVTPKT-LADVKGGTLISY-E 131 (336)
Q Consensus 55 ~P~GhGdi~~aL~~sGlld~l~~~G~~yi~v~nvDNL~~~~D-p~~lg~~~~~~~~~~~evv~k~-~~dekgG~l~~~-~ 131 (336)
.|-|-|+..... ++.+.+..-+++++.+.|++.. .| -.++-+|.++++++.+-+.+.. .....-|++... +
T Consensus 109 ~~lGTa~al~~a-----~~~l~~~~~d~~lVl~gD~l~~-~dl~~ll~~h~~~~~~~tl~~~~~~~~~~~~yG~v~~d~~ 182 (425)
T PRK00725 109 WYRGTADAVYQN-----LDIIRRYDPKYVVILAGDHIYK-MDYSRMLADHVESGADCTVACLEVPREEASAFGVMAVDEN 182 (425)
T ss_pred cccCcHHHHHHH-----HHHHHhcCCCEEEEecCCeEec-cCHHHHHHHHHHcCCCEEEEEEecchhhcccceEEEECCC
Confidence 356665533222 2333333347899999999653 34 4667788888888776553321 223455777653 4
Q ss_pred CeEEEEEeecCChhhhhhhcccCCcceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhcc
Q 019770 132 GKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFD 211 (336)
Q Consensus 132 g~~~~vEysqlp~~~~~~~~~~~~~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~~ 211 (336)
|+ +.++.+-|..... ........+.|+....|+-+.|.+.+..... +..... .+..|+++.+-
T Consensus 183 ~~--V~~~~EKp~~~~~-~~~~~~~~l~n~GIYi~~~~~L~~~L~~~~~-----------~~~~~~---~~~~dii~~l~ 245 (425)
T PRK00725 183 DR--ITAFVEKPANPPA-MPGDPDKSLASMGIYVFNADYLYELLEEDAE-----------DPNSSH---DFGKDIIPKIV 245 (425)
T ss_pred CC--EEEEEECCCCccc-cccCccceEEEeeEEEEeHHHHHHHHHHhhc-----------CCCccc---hhhHHHHHHHh
Confidence 44 3344443422111 1111123356888777888888776643110 000111 12346666542
Q ss_pred ---cceEEEEec---------c-ceeeccCCCchhHHhhhh
Q 019770 212 ---HAIGCNVHR---------S-RFLPVKATSDLLLVQSDL 239 (336)
Q Consensus 212 ---~~~~i~V~R---------~-rF~PVKn~~dll~~~sd~ 239 (336)
+..+..++- + .|.-+-+.++++.+..++
T Consensus 246 ~~~~v~~~~~~g~~~~~~~~~~gyw~digt~~~y~~an~~l 286 (425)
T PRK00725 246 EEGKVYAHPFSDSCVRSDPEEEPYWRDVGTLDAYWQANLDL 286 (425)
T ss_pred ccCcEEEEEecCCccccccccCCeEEECCCHHHHHHHHHHH
Confidence 233444432 2 367787878877666665
No 22
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=88.19 E-value=13 Score=37.22 Aligned_cols=134 Identities=12% Similarity=0.048 Sum_probs=69.3
Q ss_pred ceEEEEEeCcc-cccccc-HHHHHHHHhcCCceeEEeeecccCCcceeEEEe-eCCeEEEEEeecCChhhhhhhcccCCc
Q 019770 80 KEYVFAANSDN-LGAIVD-LKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS-YEGKVQLLEIAQVPDEHVNEFKSIEKF 156 (336)
Q Consensus 80 ~~yi~v~nvDN-L~~~~D-p~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~-~~g~~~~vEysqlp~~~~~~~~~~~~~ 156 (336)
-++++|.+.|. +....+ -.++-.+.+.+.++.+-+.++..+. .-|.+.. .+|+ +.|+.+=|....... .-
T Consensus 94 ~~~vlV~~~D~P~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~-~~g~~~~d~~g~--v~~~~ek~~~~~~~~----~~ 166 (450)
T PRK14360 94 EGDLLVLNGDVPLLRPETLEALLNTHRSSNADVTLLTARLPNPK-GYGRVFCDGNNL--VEQIVEDRDCTPAQR----QN 166 (450)
T ss_pred CCcEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEEecCCCC-CccEEEECCCCC--EEEEEECCCCChhHh----cC
Confidence 35789999999 543333 3445555566777665444444433 2455433 3454 334433332111111 11
Q ss_pred ceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhcccceEEEEecc-ceeeccCCCchhH
Q 019770 157 KIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRS-RFLPVKATSDLLL 234 (336)
Q Consensus 157 ~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~~~~~~i~V~R~-rF~PVKn~~dll~ 234 (336)
.+.|+...+|+-+.+.++++.-. +...+-|..+-|+++.+.+...+.+.-. +..=+.+..|+..
T Consensus 167 ~~~~~Giy~f~~~~l~~~~~~~~--------------~~~~~~e~~~td~i~~~~~~~~~~v~~~~~~~~i~~~~dl~~ 231 (450)
T PRK14360 167 NRINAGIYCFNWPALAEVLPKLS--------------SNNDQKEYYLTDTVSLLDPVMAVEVEDYQEINGINDRKQLAQ 231 (450)
T ss_pred cEEEEEEEEEEHHHHHHHHhhcc--------------ccccCCceeHHHHHHHHhhceEEecCCHHHhhcCCCHHHHHH
Confidence 24677778889888887764310 0011234455566666665556666433 3544555566543
No 23
>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=85.48 E-value=44 Score=33.76 Aligned_cols=113 Identities=13% Similarity=0.157 Sum_probs=61.1
Q ss_pred CCCccchhhhhhcChHHHHHHcCceEEEEEeCcccccccc-HHHHHHHHhcCCceeEEeeecccC-CcceeEEEee-CCe
Q 019770 57 PGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVD-LKILNHLIQNKNEYCMEVTPKTLA-DVKGGTLISY-EGK 133 (336)
Q Consensus 57 ~GhGdi~~aL~~sGlld~l~~~G~~yi~v~nvDNL~~~~D-p~~lg~~~~~~~~~~~evv~k~~~-dekgG~l~~~-~g~ 133 (336)
-|.||..... ++.+....-++++|.+.|++.. .| -.++-+|.++++++.+-+.+.... ...-|++... +|+
T Consensus 98 lGTa~al~~a-----~~~l~~~~~~~~lVl~gD~l~~-~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~yG~i~~d~~g~ 171 (429)
T PRK02862 98 QGTADAVRKY-----LWHFQEWDVDEYLILSGDQLYR-MDYRLFVQHHRETGADITLAVLPVDEKDASGFGLMKTDDDGR 171 (429)
T ss_pred cCcHHHHHHH-----HHHHHhcCCCEEEEecCCEEEe-CCHHHHHHHHHHcCCCEEEEEEecChhhcccceEEEECCCCc
Confidence 4666543332 2333333346899999999653 44 356777878888876655433221 2345666543 444
Q ss_pred EEEEEeecCChhh-hhhh------------cccCCcceeeeeeEEEEHHHHHHHHHh
Q 019770 134 VQLLEIAQVPDEH-VNEF------------KSIEKFKIFNTNNLWVNLKAIKRLVEA 177 (336)
Q Consensus 134 ~~~vEysqlp~~~-~~~~------------~~~~~~~~fntnni~~~l~~l~~~~~~ 177 (336)
+.++.+-|+.. .+.+ +...+-.+.|+....|+-+.|.++++.
T Consensus 172 --V~~~~Ekp~~~~~~~~~~~~s~~~~~~~~~~~~~~~~n~Giyi~~~~vl~~~l~~ 226 (429)
T PRK02862 172 --ITEFSEKPKGDELKAMAVDTSRLGLSPEEAKGKPYLASMGIYVFSRDVLFDLLNK 226 (429)
T ss_pred --EEEEEECCCccccchhcccccccccccccCCCCceEEEEEEEEEcHHHHHHHHHH
Confidence 33444444321 1000 000112356888777898888877653
No 24
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=85.47 E-value=43 Score=33.66 Aligned_cols=143 Identities=14% Similarity=0.191 Sum_probs=74.5
Q ss_pred HHHHHHcCceEEEEEeCcc-cccccc-HHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEE-EEEeecCChhhhh
Q 019770 72 LDALISQGKEYVFAANSDN-LGAIVD-LKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQ-LLEIAQVPDEHVN 148 (336)
Q Consensus 72 ld~l~~~G~~yi~v~nvDN-L~~~~D-p~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~-~vEysqlp~~~~~ 148 (336)
++.|.+.+.+++++.+.|. +...-+ -.++..+ .+.+.++-+.+-..+. .-|++...+|++. ++|-.++++....
T Consensus 90 ~~~l~~~~~d~vlv~~gD~P~i~~~~i~~li~~~--~~~~~~l~~~~~~~~~-~~g~v~~~~g~V~~~~ek~~~~~~~~~ 166 (456)
T PRK14356 90 WPSLTAAGLDRVLVVNGDTPLVTTDTIDDFLKEA--AGADLAFMTLTLPDPG-AYGRVVRRNGHVAAIVEAKDYDEALHG 166 (456)
T ss_pred HHHHhhcCCCcEEEEeCCcccCCHHHHHHHHHHH--hcCCEEEEEEEcCCCC-CceEEEEcCCeEEEEEECCCCChHHhh
Confidence 3445444678999999999 543332 2233332 2555555544433333 3466655566542 4453333322111
Q ss_pred hhcccCCcceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc----ccceEEEEec-cce
Q 019770 149 EFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF----DHAIGCNVHR-SRF 223 (336)
Q Consensus 149 ~~~~~~~~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~----~~~~~i~V~R-~rF 223 (336)
. .-...|++...|+-++++++++.-. ......-+.+ .|+++.+ .+..++.+.. +.|
T Consensus 167 ~-----~~~~~~~GiY~f~~~~l~~ll~~l~----------~~~~~~e~~l----td~i~~~~~~g~~v~~~~~~~~~~~ 227 (456)
T PRK14356 167 P-----ETGEVNAGIYYLRLDAVESLLPRLT----------NANKSGEYYI----TDLVGLAVAEGMNVLGVNCGEDPNL 227 (456)
T ss_pred h-----hcCeEEEEEEEEEHHHHHHHHHhcc----------CcccCCcEEH----HHHHHHHHHCCCeEEEEEcCCcCeE
Confidence 1 1124577777788888877764310 0001122333 3555554 1345666644 358
Q ss_pred eeccCCCchhHHh
Q 019770 224 LPVKATSDLLLVQ 236 (336)
Q Consensus 224 ~PVKn~~dll~~~ 236 (336)
.-+.+.+|+..++
T Consensus 228 ~~I~tp~dl~~a~ 240 (456)
T PRK14356 228 LGVNTPAELVRSE 240 (456)
T ss_pred ecCcCHHHHHHHH
Confidence 8899988886543
No 25
>KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=84.16 E-value=28 Score=34.24 Aligned_cols=242 Identities=16% Similarity=0.218 Sum_probs=136.2
Q ss_pred CCcccCCCCCccchhhhhhcChHHHHHHcCceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccC-CcceeEEE
Q 019770 50 DKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLA-DVKGGTLI 128 (336)
Q Consensus 50 ~~~~~~P~GhGdi~~aL~~sGlld~l~~~G~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~-dekgG~l~ 128 (336)
.--+.+|.|-|+-...++ |+.++.--..+|+.|.|=-+...-+.+|..|...+..+.|.++.-++. ...-|.++
T Consensus 82 YL~E~~plGtaGgLyhFr-----dqIl~g~ps~vFvlnaDVCcsfPl~~ml~ahr~~g~~~tll~tkvs~e~asnfG~lV 156 (407)
T KOG1460|consen 82 YLREDNPLGTAGGLYHFR-----DQILAGSPSAVFVLNADVCCSFPLQDMLEAHRRYGGIGTLLVTKVSREQASNFGCLV 156 (407)
T ss_pred hhccCCCCCcccceeehh-----hHHhcCCCceEEEEecceecCCcHHHHHHHHhhcCCceEEEEEEecHhHhhccCeee
Confidence 445679999887654453 566766789999999999888888999999999999988887754433 23456666
Q ss_pred eeCCeEEEEEeecCChhhhhhhcccCCcceeeeeeEEEEHH---HHHHHHHhcCcCcceeecccccC----C-CCceehh
Q 019770 129 SYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLK---AIKRLVEADALKMEIIPNPKEVD----G-IKVLQLE 200 (336)
Q Consensus 129 ~~~g~~~~vEysqlp~~~~~~~~~~~~~~~fntnni~~~l~---~l~~~~~~~~~~lp~~vn~K~v~----~-~~~~qlE 200 (336)
.....-.++-|.+-|.--+.+ ..||....|+-+ +++++.++.. ++. ...|..+ + ..-++||
T Consensus 157 ~dP~t~evlHYveKPsTfvSd--------~InCGvYlF~~eif~~i~~v~~q~~-~~~--~~~~~~~~l~~g~~d~irLe 225 (407)
T KOG1460|consen 157 EDPSTGEVLHYVEKPSTFVSD--------IINCGVYLFTPEIFNAIAEVYRQRQ-DLL--EVEKDLPLLQPGPADFIRLE 225 (407)
T ss_pred ecCCcCceEEeecCcchhhhc--------ccceeEEEecHHHHHHHHHHHHHHH-hhh--hhhhcccccCCCccceEEee
Confidence 543444678888888665543 256665556544 3444443311 100 0111111 2 3458899
Q ss_pred hhhchHHhhcccceEEEEeccc-eeeccCCCchhHHhhhh----hcccc-CeeEecCCcCC---C---CCCeEEeCCCcc
Q 019770 201 TAAGAAIRFFDHAIGCNVHRSR-FLPVKATSDLLLVQSDL----YTLAD-GFVTRNEARKN---P---ANPTIELGPEFK 268 (336)
Q Consensus 201 ~~~~d~~~~~~~~~~i~V~R~r-F~PVKn~~dll~~~sd~----y~~~~-g~~~~~~~r~~---~---~~P~I~L~~~f~ 268 (336)
+=+... ++.+-......-.+ ++.+|++--.+-+ |-+ |...+ +.+...|.... + ..|..++.|.-
T Consensus 226 qDvlsp--Lag~k~lY~y~t~~fW~QiKtagsal~a-s~lYLs~yk~t~p~~Lak~pgt~a~IigdVyIhPsakvhptA- 301 (407)
T KOG1460|consen 226 QDVLSP--LAGSKQLYAYETTDFWSQIKTAGSALYA-SRLYLSQYKRTHPARLAKGPGTQAEIIGDVYIHPSAKVHPTA- 301 (407)
T ss_pred chhhhh--hcCCCceEEEecccHHHHhccccceeeh-hhhHHHHHhhcCchhhcCCCCCCceEEeeeEEcCcceeCCcc-
Confidence 765543 33344444445555 8899987544322 112 22222 23332322110 0 12233332221
Q ss_pred cHHHHhhhcCCCCCccccceEEEecceEEccCeEEEEEEEEEcCCCCeEEcCCCCeeecceee
Q 019770 269 KVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEIN 331 (336)
Q Consensus 269 ~~~~~~~r~~~~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l~n~~~~ 331 (336)
++. |. ..+...|..|++|.|+-..++.. .+|..++++-+.++.
T Consensus 302 -------kiG--PN------VSIga~vrvg~GvRl~~sIIl~d-----~ei~enavVl~sIig 344 (407)
T KOG1460|consen 302 -------KIG--PN------VSIGANVRVGPGVRLRESIILDD-----AEIEENAVVLHSIIG 344 (407)
T ss_pred -------ccC--CC------ceecCCceecCCceeeeeeeccC-----cEeeccceEEeeeec
Confidence 111 33 33566777777777777665532 245566766666554
No 26
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase. This enzyme, glucose-1-phosphate adenylyltransferase, is also called ADP-glucose pyrophosphorylase. The plant form is an alpha2,beta2 heterodimer, allosterically regulated in plants. Both subunits are homologous and included in this model. In bacteria, both homomeric forms of GlgC and more active heterodimers of GlgC and GlgD have been described. This model describes the GlgC subunit only. This enzyme appears in variants of glycogen synthesis pathways that use ADP-glucose, rather than UDP-glucose as in animals.
Probab=83.58 E-value=45 Score=32.37 Aligned_cols=144 Identities=15% Similarity=0.178 Sum_probs=73.6
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecc-cCCcceeEEEee-CCeEEEEEeecCChhhhhhhcccCCcc
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKT-LADVKGGTLISY-EGKVQLLEIAQVPDEHVNEFKSIEKFK 157 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~-~~dekgG~l~~~-~g~~~~vEysqlp~~~~~~~~~~~~~~ 157 (336)
-+++++.+.|++...-=..++-.+..++.+..+-+.+.. .....-|++... +|+ +.++.+-|....... ......
T Consensus 111 ~~~~lv~~gD~l~~~~l~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~~--v~~~~ekp~~~~~~~-~~~~~~ 187 (361)
T TIGR02091 111 PEYVLILSGDHIYKMDYEKMLDYHIESGADVTIACIPVPRKEASRFGVMQVDEDGR--IVDFEEKPANPPSIP-GMPDFA 187 (361)
T ss_pred CCEEEEecCCEEEcCCHHHHHHHHHHcCCCEEEEEEecChHhcccccEEEECCCCC--EEEEEECCCCccccc-cccccc
Confidence 478999999995432113456666666666544433321 122345666543 344 445555432111110 011223
Q ss_pred eeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc-c--cceEEEEeccceeeccCCCchhH
Q 019770 158 IFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF-D--HAIGCNVHRSRFLPVKATSDLLL 234 (336)
Q Consensus 158 ~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~-~--~~~~i~V~R~rF~PVKn~~dll~ 234 (336)
+.|++...|+-+.+.+.++...-. + . +.+.+..|+++.+ + +..++.++ ..+.-|.+.+|++.
T Consensus 188 ~~~~Giyi~~~~~l~~~l~~~~~~-------~----~---~~~~~~~d~l~~l~~~~~v~~~~~~-~~w~digt~~~~~~ 252 (361)
T TIGR02091 188 LASMGIYIFDKDVLKELLEEDADD-------P----E---SSHDFGKDIIPRALEEGSVQAYLFS-GYWRDVGTIDSFWE 252 (361)
T ss_pred EEeeeEEEEcHHHHHHHHHHHhhc-------C----C---cccccHHHHHHHHhhcCceEEEeeC-CEEEECCCHHHHHH
Confidence 568887778877776555431100 0 0 0011223444333 2 34455554 45888999999887
Q ss_pred Hhhhhhc
Q 019770 235 VQSDLYT 241 (336)
Q Consensus 235 ~~sd~y~ 241 (336)
++.++..
T Consensus 253 a~~~~l~ 259 (361)
T TIGR02091 253 ANMDLVS 259 (361)
T ss_pred HHHHHhC
Confidence 7777643
No 27
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form. Alternate name: dTDP-D-glucose synthase
Probab=82.65 E-value=49 Score=32.10 Aligned_cols=132 Identities=14% Similarity=0.108 Sum_probs=70.0
Q ss_pred EEEEEeCcccccccc-HHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcceee
Q 019770 82 YVFAANSDNLGAIVD-LKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFN 160 (336)
Q Consensus 82 yi~v~nvDNL~~~~D-p~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~fn 160 (336)
-+++.+.|++.. .| -.++-.+.+++++.++-+.+...+ ..-|++...++. .+.++.+-|.... -.+.|
T Consensus 100 ~~li~~gD~~~~-~~l~~l~~~~~~~~~d~ti~~~~~~~~-~~~g~~~~~~~~-~v~~~~ekp~~~~--------~~~~~ 168 (353)
T TIGR01208 100 DFVVYLGDNLIQ-DGISRFVKSFEEKDYDALILLTKVRDP-TAFGVAVLEDGK-RILKLVEKPKEPP--------SNLAV 168 (353)
T ss_pred CEEEEECCeecC-ccHHHHHHHHHhcCCCcEEEEEECCCh-hhCeEEEEcCCC-cEEEEEECCCCCC--------ccceE
Confidence 356778899432 33 356677777888877766654433 344665554332 3444444443211 12457
Q ss_pred eeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc-c---cceEEEEeccceeeccCCCchhHHh
Q 019770 161 TNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF-D---HAIGCNVHRSRFLPVKATSDLLLVQ 236 (336)
Q Consensus 161 tnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~-~---~~~~i~V~R~rF~PVKn~~dll~~~ 236 (336)
+...+|+-..++ .++... + .. .. |..+-|+++.+ + +..++.++- .+..+.+.+|++.++
T Consensus 169 ~Giy~~~~~l~~-~l~~~~---~------~~--~~----e~~l~d~l~~l~~~g~~v~~~~~~g-~w~digt~~dl~~a~ 231 (353)
T TIGR01208 169 VGLYMFRPLIFE-AIKNIK---P------SW--RG----ELEITDAIQWLIEKGYKVGGSKVTG-WWKDTGKPEDLLDAN 231 (353)
T ss_pred EEEEEECHHHHH-HHHhcC---C------CC--CC----cEEHHHHHHHHHHcCCeEEEEEeCc-EEEeCCCHHHHHHHH
Confidence 776777764433 333210 0 00 11 22234555444 2 233444432 478999999988777
Q ss_pred hhhhc
Q 019770 237 SDLYT 241 (336)
Q Consensus 237 sd~y~ 241 (336)
.++-.
T Consensus 232 ~~ll~ 236 (353)
T TIGR01208 232 RLILD 236 (353)
T ss_pred HHHHh
Confidence 66643
No 28
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit. This family is GlgD, an apparent regulatory protein that appears in an alpha2/beta2 heterotetramer with GlgC (glucose-1-phosphate adenylyltransferase, TIGR02091) in a subset of bacteria that use GlgC for glycogen biosynthesis.
Probab=80.83 E-value=58 Score=31.78 Aligned_cols=136 Identities=15% Similarity=0.052 Sum_probs=71.7
Q ss_pred ceEEEEEeCcccccccc-HHHHHHHHhcCCceeEEeeecc--cCCcceeEEEee-CCeEEEEEeecCChhhhhhhcccCC
Q 019770 80 KEYVFAANSDNLGAIVD-LKILNHLIQNKNEYCMEVTPKT--LADVKGGTLISY-EGKVQLLEIAQVPDEHVNEFKSIEK 155 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~D-p~~lg~~~~~~~~~~~evv~k~--~~dekgG~l~~~-~g~~~~vEysqlp~~~~~~~~~~~~ 155 (336)
-+++++.|.|++.. .| -.++-+|.++++++++-+.+-. .+...+|++... +|+. .++.+-++.. . .
T Consensus 114 ~~~~lvlnGD~l~~-~dl~~ll~~h~~~~a~~tl~~~~v~~~~~~~~g~vv~~~~~g~v--~~~~~~~~~~---~----~ 183 (369)
T TIGR02092 114 SEYTVVLNSHMVCN-IDLKAVLKYHEETGKDITVVYKKVKPADASEYDTILRFDESGKV--KSIGQNLNPE---E----E 183 (369)
T ss_pred CCEEEEECCCEEEe-cCHHHHHHHHHHcCCCEEEEEEecCHHHccccCcEEEEcCCCCE--EeccccCCCC---C----c
Confidence 47899999999553 44 4667778888888765554422 334456666543 4533 3332211110 0 1
Q ss_pred cceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc-ccceEEEEecc-ceeeccCCCchh
Q 019770 156 FKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF-DHAIGCNVHRS-RFLPVKATSDLL 233 (336)
Q Consensus 156 ~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~-~~~~~i~V~R~-rF~PVKn~~dll 233 (336)
..-|+....|+-+.+.++++.. . +... .+.+.|+++.. ++-.+..+.-+ .|.-+.+..|++
T Consensus 184 -~~~~~Giyi~~~~~l~~~l~~~---~---------~~~~----~~~~~d~i~~~~~~~~v~~~~~~g~w~dIgt~~~l~ 246 (369)
T TIGR02092 184 -ENISLDIYIVSTDLLIELLYEC---I---------QRGK----LTSLEELIRENLKELNINAYEYTGYLANINSVKSYY 246 (369)
T ss_pred -ceeeeeEEEEEHHHHHHHHHHH---h---------hcCc----cccHHHHHHHHhccCcEEEEecCCceeEcCCHHHHH
Confidence 1236666677777666665431 0 0000 11223444332 22222333333 377888888988
Q ss_pred HHhhhhhcc
Q 019770 234 LVQSDLYTL 242 (336)
Q Consensus 234 ~~~sd~y~~ 242 (336)
.+..++...
T Consensus 247 ~a~~~~l~~ 255 (369)
T TIGR02092 247 KANMDLLDP 255 (369)
T ss_pred HHHHHHhCC
Confidence 877776543
No 29
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=78.18 E-value=84 Score=32.06 Aligned_cols=90 Identities=11% Similarity=0.085 Sum_probs=50.9
Q ss_pred CceEEEEEeCcc-cccccc-HHHHHHHHhcCCceeEEeeecccCCcceeEEEe-eCCeE-EEEEeecCChhhhhhhcccC
Q 019770 79 GKEYVFAANSDN-LGAIVD-LKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS-YEGKV-QLLEIAQVPDEHVNEFKSIE 154 (336)
Q Consensus 79 G~~yi~v~nvDN-L~~~~D-p~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~-~~g~~-~~vEysqlp~~~~~~~~~~~ 154 (336)
.-++++|.+.|+ +....+ -.++-.+..++..+.+-+.+...+ ..-|.+.. .+|++ .++|..+.++...
T Consensus 98 ~~~~vlV~~gD~P~~~~~~l~~li~~~~~~~~~~~v~~~~~~~p-~~yg~~~~~~~g~V~~~~EKp~~~~~~~------- 169 (482)
T PRK14352 98 FDGTVVVTAGDVPLLDGETLADLVATHTAEGNAVTVLTTTLDDP-TGYGRILRDQDGEVTAIVEQKDATPSQR------- 169 (482)
T ss_pred CCCeEEEEeCCeeccCHHHHHHHHHHHHhcCCeEEEEEeecCCC-CCCCEEEECCCCCEEEEEECCCCCHHHh-------
Confidence 457899999999 554433 234555555666655544444333 34555544 35553 3455433332221
Q ss_pred CcceeeeeeEEEEHHHHHHHHH
Q 019770 155 KFKIFNTNNLWVNLKAIKRLVE 176 (336)
Q Consensus 155 ~~~~fntnni~~~l~~l~~~~~ 176 (336)
.....|+...+|+-+.|+++++
T Consensus 170 ~~~~~~~Giy~f~~~~l~~~~~ 191 (482)
T PRK14352 170 AIREVNSGVYAFDAAVLRSALA 191 (482)
T ss_pred hcceEEEEEEEEEHHHHHHHHH
Confidence 1223688878899888877764
No 30
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=71.69 E-value=1.2e+02 Score=30.69 Aligned_cols=136 Identities=13% Similarity=0.075 Sum_probs=71.9
Q ss_pred ceEEEEEeCcc-cccccc-HHHHHHHHhcCCceeEEeeecccCCcceeEEEe-eCCeEEEEEeecCChhhhhhhcccCCc
Q 019770 80 KEYVFAANSDN-LGAIVD-LKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS-YEGKVQLLEIAQVPDEHVNEFKSIEKF 156 (336)
Q Consensus 80 ~~yi~v~nvDN-L~~~~D-p~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~-~~g~~~~vEysqlp~~~~~~~~~~~~~ 156 (336)
-+++++.+.|+ +....| -.++-++..+++++.+-+.+...+ ..-|.+.. .+|+ ++++.+-|+...... ..
T Consensus 96 ~~~vlv~~gD~p~~~~~~i~~l~~~~~~~~~~~~v~~~~~~~~-~~~g~v~~d~~g~--v~~~~ek~~~~~~~~----~~ 168 (459)
T PRK14355 96 SGTVLILCGDVPLLRAETLQGMLAAHRATGAAVTVLTARLENP-FGYGRIVRDADGR--VLRIVEEKDATPEER----SI 168 (459)
T ss_pred CCcEEEEECCccCcCHHHHHHHHHHHHhcCCcEEEEEEEcCCC-CcCCEEEEcCCCC--EEEEEEcCCCChhHh----hc
Confidence 47899999999 654444 456666666777776655554444 33455443 3444 444444332111100 12
Q ss_pred ceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc-c---cceEEEEec-cceeeccCCCc
Q 019770 157 KIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF-D---HAIGCNVHR-SRFLPVKATSD 231 (336)
Q Consensus 157 ~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~-~---~~~~i~V~R-~rF~PVKn~~d 231 (336)
.+.|++..+|+-+++.+.++. + +.. + .+-|..+.|+++.+ + +..+++.+. +++.-+-+..|
T Consensus 169 ~~~~~Giy~~~~~~l~~~l~~----~------~~~-~---~~~e~~~~d~i~~l~~~g~~v~~~~~~~~~~~~~i~~~~~ 234 (459)
T PRK14355 169 REVNSGIYCVEAAFLFDAIGR----L------GND-N---AQGEYYLTDIVAMAAAEGLRCLAFPVADPDEIMGVNDRAQ 234 (459)
T ss_pred cEEEEEEEEEeHHHHHHHHHH----c------Ccc-c---cCCceeHHHHHHHHHHCCCeEEEEEcCCHHHhcCCCCHHH
Confidence 345788777888777665542 0 000 0 01133344666554 2 234555533 34777877777
Q ss_pred hhHHh
Q 019770 232 LLLVQ 236 (336)
Q Consensus 232 ll~~~ 236 (336)
++.++
T Consensus 235 ~~~a~ 239 (459)
T PRK14355 235 LAEAA 239 (459)
T ss_pred HHHHH
Confidence 66543
No 31
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]
Probab=62.64 E-value=1.6e+02 Score=29.01 Aligned_cols=133 Identities=13% Similarity=0.120 Sum_probs=73.3
Q ss_pred eEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcceee
Q 019770 81 EYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFN 160 (336)
Q Consensus 81 ~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~fn 160 (336)
+-.++.|.|++...=--.++.++.+++....+-.+.-..+ ..=|++...++.-.++++.+-|... .. .-.+.|
T Consensus 100 ~~f~v~~GDv~~~~dl~~l~~~~~~~~~~~~~~~~~~~~~-~~~Gvv~~~~~~~~v~~f~ekp~~~-~~-----~~~~in 172 (358)
T COG1208 100 DDFLVLNGDVLTDLDLSELLEFHKKKGALATIALTRVLDP-SEFGVVETDDGDGRVVEFREKPGPE-EP-----PSNLIN 172 (358)
T ss_pred CcEEEEECCeeeccCHHHHHHHHHhccCccEEEEEecCCC-CcCceEEecCCCceEEEEEecCCCC-CC-----CCceEE
Confidence 7889999999544322457777777755555544444433 4555565542335667777766321 10 112457
Q ss_pred eeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc-ccce-EEEEecc-ceeeccCCCchhHHhh
Q 019770 161 TNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF-DHAI-GCNVHRS-RFLPVKATSDLLLVQS 237 (336)
Q Consensus 161 tnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~-~~~~-~i~V~R~-rF~PVKn~~dll~~~s 237 (336)
+...+++=+.++ .++ .....-+|. +.++.+ +.-. ..-+.-+ .|..+-+..|++.+..
T Consensus 173 ~Giyi~~~~v~~-~i~----------------~~~~~~~~~---~~~~~l~~~~~~v~~~~~~g~W~dig~p~d~~~a~~ 232 (358)
T COG1208 173 AGIYIFDPEVFD-YIE----------------KGERFDFEE---ELLPALAAKGEDVYGYVFEGYWLDIGTPEDLLEANE 232 (358)
T ss_pred eEEEEECHHHhh-hcc----------------cCCcccchh---hHHHHHHhCCCcEEEEEeCCeEEeCCCHHHHHHHHH
Confidence 776667666665 111 111222333 344332 2222 3333333 6999999999988777
Q ss_pred hhh
Q 019770 238 DLY 240 (336)
Q Consensus 238 d~y 240 (336)
++-
T Consensus 233 ~~~ 235 (358)
T COG1208 233 LLL 235 (358)
T ss_pred HHH
Confidence 763
No 32
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry.; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....
Probab=62.29 E-value=1.2e+02 Score=27.29 Aligned_cols=134 Identities=16% Similarity=0.145 Sum_probs=81.6
Q ss_pred eEEEEEeCccccccccHHHHHHHHhcCCc--eeEEeeecccCCcceeEEEee-CCeEEEEEeecCChhhhhhhcccCCcc
Q 019770 81 EYVFAANSDNLGAIVDLKILNHLIQNKNE--YCMEVTPKTLADVKGGTLISY-EGKVQLLEIAQVPDEHVNEFKSIEKFK 157 (336)
Q Consensus 81 ~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~--~~~evv~k~~~dekgG~l~~~-~g~~~~vEysqlp~~~~~~~~~~~~~~ 157 (336)
+++.+.+.|++...-=..++-.+.+++.+ +.+..++... ..+-|++... +| .++++-|-|..... -.
T Consensus 104 ~~~lv~~gD~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~g~v~~d~~~--~V~~~~EKP~~~~~-------~~ 173 (248)
T PF00483_consen 104 EDFLVLNGDIIFDDDLQDMLEFHRESNADGTVTLLVVPVED-PSRYGVVEVDEDG--RVIRIVEKPDNPNA-------SN 173 (248)
T ss_dssp SEEEEETTEEEESTTHHHHHHHHHHHSSCESEEEEEEESSG-GGGSEEEEEETTS--EEEEEEESCSSHSH-------SS
T ss_pred ceEEEEeccccccchhhhHHHhhhccccccccccccccccc-cccceeeeeccce--eEEEEeccCccccc-------ce
Confidence 57999999996665337788888888884 4444555443 4555665544 35 45555555543211 23
Q ss_pred eeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc----ccceEEEEecc-ceeeccCCCch
Q 019770 158 IFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF----DHAIGCNVHRS-RFLPVKATSDL 232 (336)
Q Consensus 158 ~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~----~~~~~i~V~R~-rF~PVKn~~dl 232 (336)
+.|+...+|+-+.+..+++. . .+.-+-|-++.|+++.+ ....++..+.. .|.-|.+.+|+
T Consensus 174 ~~~~G~Y~~~~~~~~~~~~~-~--------------~~~~~~~~~l~d~i~~~~~~~~~~~~~~~~~~~~w~dig~~~~~ 238 (248)
T PF00483_consen 174 LINTGIYIFKPEIFDFLLEM-I--------------KENARGEDFLTDAIPKLLEQGKKVYAFIFEGNAYWIDIGTPEDY 238 (248)
T ss_dssp EEEEEEEEEETHHHHHHHHH-H--------------HTCTTSSHHHHHHHHHHHHTTCEEEEEEHSSEE-EEETSSHHHH
T ss_pred eccCceEEEcchHHHHHhhh-h--------------hccchhhhHHHHHHHHHHHcCCceEEEEecCCeEEEECCCHHHH
Confidence 56888788888877776531 0 01122355566676654 22334455555 49999999998
Q ss_pred hHHhhhh
Q 019770 233 LLVQSDL 239 (336)
Q Consensus 233 l~~~sd~ 239 (336)
+.+..++
T Consensus 239 ~~a~~~~ 245 (248)
T PF00483_consen 239 LEANMDL 245 (248)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666554
No 33
>COG1664 CcmA Integral membrane protein CcmA involved in cell shape determination [Cell envelope biogenesis, outer membrane]
Probab=61.76 E-value=12 Score=32.50 Aligned_cols=42 Identities=12% Similarity=0.340 Sum_probs=29.7
Q ss_pred eEEEecceEEccCeEEEEEE--EEEcCCCCeEEcCCCCeeecceee
Q 019770 288 SLKVTGDVWFGANITLKGKV--TIAAKSGEKLEIPDGAVLENKEIN 331 (336)
Q Consensus 288 ~L~V~Gdv~fg~~v~l~G~v--~i~a~~~~~~~ip~g~~l~n~~~~ 331 (336)
-++++|++.|-+.+.++|++ .|.++.+ ++|....++++.+..
T Consensus 29 g~~f~G~l~f~~~l~IdG~~~G~v~s~~~--iiv~~~g~V~gei~a 72 (146)
T COG1664 29 GTTFKGELVFEGPLRIDGTFEGDVHSDGG--IVVGESGRVEGEIEA 72 (146)
T ss_pred CCEEEEEEEecceEEEeEEEEEEEEeCCC--EEECCccEEEEEEEe
Confidence 35588888888888888876 4555544 777777777765544
No 34
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=60.69 E-value=1.9e+02 Score=28.96 Aligned_cols=140 Identities=14% Similarity=0.075 Sum_probs=70.9
Q ss_pred CceEEEEEeCcc-ccccccH-HHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCc
Q 019770 79 GKEYVFAANSDN-LGAIVDL-KILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKF 156 (336)
Q Consensus 79 G~~yi~v~nvDN-L~~~~Dp-~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~ 156 (336)
+.+++++.+.|. +...-+. .++- +.+++.+..+.+.+-..+ .+-|.+...+|+ +.++.+=|+....+. .-
T Consensus 98 ~~~~~lv~~~D~P~i~~~~l~~l~~-~~~~~~~~~i~~~~~~~~-~~~g~~~~~~g~--v~~~~ek~~~~~~~~----~~ 169 (446)
T PRK14353 98 GYGDVLVLYGDTPLITAETLARLRE-RLADGADVVVLGFRAADP-TGYGRLIVKGGR--LVAIVEEKDASDEER----AI 169 (446)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHH-hHhcCCcEEEEEEEeCCC-CcceEEEECCCe--EEEEEECCCCChHHh----hc
Confidence 457889999998 5433222 2222 234566776666654433 345655545554 445554332211110 11
Q ss_pred ceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhcccceEEEEeccceeeccCCCchhHHh
Q 019770 157 KIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQ 236 (336)
Q Consensus 157 ~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~~~ 236 (336)
.+.|++..+|+-+.+.+.++.-. + +. ....+-++.++..+++.=.+..++..+.+.|.-|.+.+|+..++
T Consensus 170 ~~~~~Giy~~~~~~l~~~l~~~~-------~-~~--~~~~~~~~d~~~~l~~~g~~v~~~~~~~~~~~~I~t~~dl~~a~ 239 (446)
T PRK14353 170 TLCNSGVMAADGADALALLDRVG-------N-DN--AKGEYYLTDIVAIARAEGLRVAVVEAPEDEVRGINSRAELAEAE 239 (446)
T ss_pred eEEEEEEEEEEHHHHHHHHHhhc-------c-cC--CCCcEeHHHHHHHHHHCCCeEEEEecChhhcccCCCHHHHHHHH
Confidence 24577777788777766654310 0 00 01112233333222222123445555555688999999986554
No 35
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=59.73 E-value=2.1e+02 Score=29.30 Aligned_cols=81 Identities=12% Similarity=0.082 Sum_probs=43.8
Q ss_pred EEEEEeCcc-ccccccH-HHHHHHHhcCCceeEEeeecccCCcceeEEEee-CCeEEEEEeecCChhhhhhhcccCCcce
Q 019770 82 YVFAANSDN-LGAIVDL-KILNHLIQNKNEYCMEVTPKTLADVKGGTLISY-EGKVQLLEIAQVPDEHVNEFKSIEKFKI 158 (336)
Q Consensus 82 yi~v~nvDN-L~~~~Dp-~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~-~g~~~~vEysqlp~~~~~~~~~~~~~~~ 158 (336)
.+++.+.|+ +....+. .++.++.+++.++.+-+.+... ..+-|++... +|+ +.++.|-|+....+. ....
T Consensus 101 ~~lV~~gD~P~i~~~~l~~ll~~~~~~~~~~ti~~~~~~~-~~~yG~v~~d~~g~--v~~~~Ek~~~~~~~~----~~~~ 173 (481)
T PRK14358 101 DILVLYGDTPLLRPDTLRALVADHRAQGSAMTILTGELPD-ATGYGRIVRGADGA--VERIVEQKDATDAEK----AIGE 173 (481)
T ss_pred cEEEEeCCeeccCHHHHHHHHHHHHhcCCeEEEEEEEcCC-CCCceEEEECCCCC--EEEEEECCCCChhHh----hCCe
Confidence 477899999 5544442 5566677777776654443332 3446777653 554 334444332211110 1124
Q ss_pred eeeeeEEEEHH
Q 019770 159 FNTNNLWVNLK 169 (336)
Q Consensus 159 fntnni~~~l~ 169 (336)
+|+....|+-+
T Consensus 174 ~n~Giyi~~~~ 184 (481)
T PRK14358 174 FNSGVYVFDAR 184 (481)
T ss_pred EEEEEEEEchH
Confidence 68887777733
No 36
>KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=57.18 E-value=1.2e+02 Score=30.22 Aligned_cols=86 Identities=17% Similarity=0.201 Sum_probs=65.4
Q ss_pred EEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcceeee
Q 019770 82 YVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNT 161 (336)
Q Consensus 82 yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~fnt 161 (336)
-.||-|.|=|+...=-.++.+|..+++|...-|++=.. ..|=|++.-..+.=++..+.|-|++.+... -|.
T Consensus 114 ~ffVLnsDvi~~~p~~~~vqfH~~~gae~TI~~t~vde-pSkyGvv~~d~~~grV~~F~EKPkd~vsnk--------ina 184 (371)
T KOG1322|consen 114 PFFVLNSDVICRMPYKEMVQFHRAHGAEITIVVTKVDE-PSKYGVVVIDEDTGRVIRFVEKPKDLVSNK--------INA 184 (371)
T ss_pred cEEEecCCeeecCCHHHHHHHHHhcCCceEEEEEeccC-ccccceEEEecCCCceeEehhCchhhhhcc--------ccc
Confidence 57999999999998899999999999998887776655 678888876655556778888888544322 234
Q ss_pred eeEEEEHHHHHHHHH
Q 019770 162 NNLWVNLKAIKRLVE 176 (336)
Q Consensus 162 nni~~~l~~l~~~~~ 176 (336)
....++-+.|.+++-
T Consensus 185 GiYi~~~~vL~ri~~ 199 (371)
T KOG1322|consen 185 GIYILNPEVLDRILL 199 (371)
T ss_pred eEEEECHHHHhHhhh
Confidence 445568888888764
No 37
>PLN02241 glucose-1-phosphate adenylyltransferase
Probab=55.75 E-value=98 Score=31.27 Aligned_cols=163 Identities=11% Similarity=0.096 Sum_probs=87.9
Q ss_pred CCCCCccchhhhhhcChHHHHHHcCceEEEEEeCcccccccc-HHHHHHHHhcCCceeEEeeec--ccCCcceeEEEeeC
Q 019770 55 YPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVD-LKILNHLIQNKNEYCMEVTPK--TLADVKGGTLISYE 131 (336)
Q Consensus 55 ~P~GhGdi~~aL~~sGlld~l~~~G~~yi~v~nvDNL~~~~D-p~~lg~~~~~~~~~~~evv~k--~~~dekgG~l~~~~ 131 (336)
.|-|.||....... .+++...++-+++++.+.|++. ..| -.++-+|.++++++.+-+.+- ..+ ..-|++.. +
T Consensus 99 ~~lGt~~al~~~~~--~~~~~~~~~~~~~lv~~gD~v~-~~dl~~ll~~h~~~~a~~ti~~~~v~~~~~-~~ygvv~~-d 173 (436)
T PLN02241 99 WFQGTADAVRQFLW--LFEDAKNKNVEEVLILSGDHLY-RMDYMDFVQKHRESGADITIACLPVDESRA-SDFGLMKI-D 173 (436)
T ss_pred cccCcHHHHHHHHH--HHHhcccCCCCEEEEecCCeEE-ccCHHHHHHHHHHcCCCEEEEEEecchhhc-CcceEEEE-C
Confidence 47788776544321 2332222235899999999964 455 467888888888866544322 222 45677765 3
Q ss_pred CeEEEEEeecCChhhhhh-h------------cccCCcceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCcee
Q 019770 132 GKVQLLEIAQVPDEHVNE-F------------KSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQ 198 (336)
Q Consensus 132 g~~~~vEysqlp~~~~~~-~------------~~~~~~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~q 198 (336)
+.-+++++.+-|+..... + ....+..+.|+....|+-+.|..+++... + +..
T Consensus 174 ~~~~v~~~~Ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GIyi~~~~~l~~ll~~~~---~---------~~~--- 238 (436)
T PLN02241 174 DTGRIIEFSEKPKGDELKAMQVDTTVLGLSPEEAKEKPYIASMGIYVFKKDVLLKLLRWRF---P---------TAN--- 238 (436)
T ss_pred CCCCEEEEEECCCCcccccccccccccccccccccccceEEEeEEEEEEHHHHHHHHHhhc---c---------ccc---
Confidence 333566777766432100 0 00011234577767778888877765310 0 000
Q ss_pred hhhhhchHHhhcc----cceEEEEeccceeeccCCCchhHHhhhhh
Q 019770 199 LETAAGAAIRFFD----HAIGCNVHRSRFLPVKATSDLLLVQSDLY 240 (336)
Q Consensus 199 lE~~~~d~~~~~~----~~~~i~V~R~rF~PVKn~~dll~~~sd~y 240 (336)
-+..|+++.+- +..++.++ ..+.-+-+..+++.++.++-
T Consensus 239 --~~~~dil~~l~~~g~~v~~~~~~-gyw~dIg~~~~y~~a~~~~l 281 (436)
T PLN02241 239 --DFGSEIIPGAIKEGYNVQAYLFD-GYWEDIGTIKSFYEANLALT 281 (436)
T ss_pred --chhHHHHHHHhhcCCeEEEEeeC-CEEEECCCHHHHHHHHHHHh
Confidence 23345565442 23344333 24677777777776666653
No 38
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation.
Probab=48.10 E-value=1.4e+02 Score=26.76 Aligned_cols=84 Identities=19% Similarity=0.160 Sum_probs=54.5
Q ss_pred EEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcceeee
Q 019770 82 YVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNT 161 (336)
Q Consensus 82 yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~fnt 161 (336)
-+.+.+.|++...--..++.++.+++++.++-+.+... ..+-|.+...++.-.++++.+-|.+.. -.+.|+
T Consensus 103 ~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~v~~d~~~~~v~~~~ekp~~~~--------~~~~~~ 173 (233)
T cd06425 103 PFFVLNSDVICDFPLAELLDFHKKHGAEGTILVTKVED-PSKYGVVVHDENTGRIERFVEKPKVFV--------GNKINA 173 (233)
T ss_pred CEEEEeCCEeeCCCHHHHHHHHHHcCCCEEEEEEEcCC-ccccCeEEEcCCCCEEEEEEECCCCCC--------CCEEEE
Confidence 36777999854322257888898899998887776543 456787765431225667766554321 134688
Q ss_pred eeEEEEHHHHHHH
Q 019770 162 NNLWVNLKAIKRL 174 (336)
Q Consensus 162 nni~~~l~~l~~~ 174 (336)
+..+|+-+.++.+
T Consensus 174 Giyi~~~~~l~~l 186 (233)
T cd06425 174 GIYILNPSVLDRI 186 (233)
T ss_pred EEEEECHHHHHhc
Confidence 8888898877554
No 39
>KOG4042 consensus Dynactin subunit p27/WS-3, involved in transport of organelles along microtubules [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton]
Probab=47.04 E-value=18 Score=32.10 Aligned_cols=47 Identities=19% Similarity=0.285 Sum_probs=37.5
Q ss_pred CCCccccceEEEecceEEccCeEEEEEEEEEcCCCCeEEcCCCCeeec
Q 019770 280 IPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLEN 327 (336)
Q Consensus 280 ~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l~n 327 (336)
.|+-+=|-.-.++|||+|+++-++--.+++.|..| +|.|-.|.++|.
T Consensus 12 ap~AvVCvEs~irGdvti~~gcVvHP~a~~iA~aG-PI~iGEnniiEE 58 (190)
T KOG4042|consen 12 APSAVVCVESDIRGDVTIKEGCVVHPFAVFIATAG-PIYIGENNIIEE 58 (190)
T ss_pred cCceEEEEecccccceEecCCcEecceEEEEcccC-CEEEccCchhhh
Confidence 46656677778999999999999999999988876 466767766654
No 40
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=46.53 E-value=30 Score=29.14 Aligned_cols=63 Identities=25% Similarity=0.344 Sum_probs=38.2
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe---------eCCeEEEEEeecCChhhhhhh
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS---------YEGKVQLLEIAQVPDEHVNEF 150 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~---------~~g~~~~vEysqlp~~~~~~~ 150 (336)
.|.|+|+|++| |+. |..-+++= +.-.|++|. .++++++.=|++++++++..+
T Consensus 41 ~E~V~V~Nv~n-G~R---------------f~TYvI~g---~~GSg~I~lNGaAArl~~~GD~vII~sy~~~~~~e~~~~ 101 (116)
T PF02261_consen 41 YEQVQVVNVNN-GER---------------FETYVIPG---ERGSGVICLNGAAARLVQVGDRVIIMSYAQVDEEEAKNH 101 (116)
T ss_dssp TBEEEEEETTT---E---------------EEEEEEEE---STTTT-EEEEGGGGGCS-TT-EEEEEEEEEEEHHHHHH-
T ss_pred CCEEEEEECCC-CcE---------------EEEEEEEc---cCCCcEEEECCHHHhccCCCCEEEEEEcccCCHHHHhhC
Confidence 78999999999 332 33344422 222477774 467899999999999988776
Q ss_pred cccCCcceeeeee
Q 019770 151 KSIEKFKIFNTNN 163 (336)
Q Consensus 151 ~~~~~~~~fntnn 163 (336)
++ +..+.|-+|
T Consensus 102 ~P--~vv~vd~~N 112 (116)
T PF02261_consen 102 KP--KVVFVDEKN 112 (116)
T ss_dssp ----EEEEEETTS
T ss_pred CC--EEEEECCCC
Confidence 53 344445444
No 41
>PF07959 Fucokinase: L-fucokinase; InterPro: IPR012887 In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated by L-fucokinase to form L-fucose-L-phosphate, which is then further converted to GDP-L-fucose in the reaction catalysed by GDP-L-fucose pyrophosphorylase []. ; GO: 0016772 transferase activity, transferring phosphorus-containing groups
Probab=44.41 E-value=2.3e+02 Score=28.70 Aligned_cols=201 Identities=15% Similarity=0.134 Sum_probs=98.9
Q ss_pred CceeeecCCCcccCCCCCCCCcccCCCC----CccchhhhhhcChHHHHHHcCceEEEEEeCccccccccHHHHHHHHhc
Q 019770 31 QYPRLCADDFVPLPCKGKTDKDGWYPPG----HGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQN 106 (336)
Q Consensus 31 ~~P~l~~~~~~~~~~~~~~~~~~~~P~G----hGdi~~aL~~sGlld~l~~~G~~yi~v~nvDNL~~~~Dp~~lg~~~~~ 106 (336)
++|..+.=|+++.+-|- -.|.+ =++-...|. ..+..++.+++..=|+|.+.|=|--..+...+-| .
T Consensus 7 RlP~~s~~GK~Ft~lP~------~~p~~~~~~L~~~ll~l~-~~~~~~~~~~~ppGv~V~s~D~vl~~~~~~~~~~---~ 76 (414)
T PF07959_consen 7 RLPNYSACGKAFTPLPV------ENPQGPVSALFDNLLELK-LAMYIDFPPGMPPGVLVCSGDMVLSVPDDPLIDW---D 76 (414)
T ss_pred cCCccccccceeecccc------CCCCCcchhhhhhHHHHH-HHHHHHHHhhhhcceEEEecccccccCccccCCC---C
Confidence 46777777776665441 11222 122233332 4566777777777789999994222223223322 2
Q ss_pred CCceeEEeeecccC-CcceeEEEe-eCCeE-EEEEeecC------Ch-hhhh---hhcccCCcceeeeeeEEEEHHHHHH
Q 019770 107 KNEYCMEVTPKTLA-DVKGGTLIS-YEGKV-QLLEIAQV------PD-EHVN---EFKSIEKFKIFNTNNLWVNLKAIKR 173 (336)
Q Consensus 107 ~~~~~~evv~k~~~-dekgG~l~~-~~g~~-~~vEysql------p~-~~~~---~~~~~~~~~~fntnni~~~l~~l~~ 173 (336)
+..+..-.+|=+.. ...=||.+. .+|.. .-.||.++ |. +++. +....+.+.. -+..++++-++.++
T Consensus 77 ~~g~~~la~p~~~~~at~HGVfv~~~~~~~~~~~~~~~v~~~L~KpS~eem~~~~av~~~~~~~l-dsG~~~~s~~~~e~ 155 (414)
T PF07959_consen 77 EPGVTALAHPSSLEYATNHGVFVLDRQGPDEEDLEYREVKDFLQKPSEEEMRASGAVLPDGNVLL-DSGIVFFSSKAVES 155 (414)
T ss_pred CCCEEEEEeeCCHHHhcCCeEEEeCCCCCccccchhhhHHHhhcCCCHHHHHhCCcccCCCcccc-cccceeccHHHHHH
Confidence 25556555554432 234466665 23322 13444443 33 4442 2222333332 44446778888888
Q ss_pred HHHhcCcCcceeecccccC--CCCceehhhhhchHHhhcccceEEEEeccceeeccCCCchhHHhhhhhccccC
Q 019770 174 LVEADALKMEIIPNPKEVD--GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADG 245 (336)
Q Consensus 174 ~~~~~~~~lp~~vn~K~v~--~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~~~sd~y~~~~g 245 (336)
++.... .-| ...-++.. ++..+++ .+.+|..+.+-...-.+-++..=.++|..+.+..+|+.+|.+-+|
T Consensus 156 L~~~~~-~~~-~~~~~y~~~~g~~~~ei-~lY~Dfl~aLg~~~t~e~~~~~~~~~~~~~~l~~aR~~l~~~Lr~ 226 (414)
T PF07959_consen 156 LLYLHV-SPP-LDLCTYYGLSGALPCEI-DLYGDFLQALGPDATEEYPENTSNVLKEESELREARQKLWKLLRG 226 (414)
T ss_pred HHHhcc-Cch-HhhhhhhhhcCCcccee-hHHHHHHHHhcCCccccCccccCCCcchhHHHHHHHHHHHHHhhh
Confidence 876421 001 01111111 2333343 345666655543333333444444555555566788888887766
No 42
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=41.71 E-value=94 Score=25.96 Aligned_cols=54 Identities=24% Similarity=0.333 Sum_probs=37.3
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe---------eCCeEEEEEeecCChhhhhhh
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS---------YEGKVQLLEIAQVPDEHVNEF 150 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~---------~~g~~~~vEysqlp~~~~~~~ 150 (336)
.|.|.|+|++| |.. |..-+++ .++-.|++|. .++++++.=|+++++++...+
T Consensus 40 ~E~V~I~Nv~N-G~R---------------f~TYvI~---g~~gSg~I~lNGAAAr~~~~GD~vII~sy~~~~~~e~~~~ 100 (111)
T cd06919 40 YEKVLVVNVNN-GAR---------------FETYVIP---GERGSGVICLNGAAARLGQPGDRVIIMAYALMDEEEAEGH 100 (111)
T ss_pred CCEEEEEECCC-CcE---------------EEEEEEE---cCCCCCEEEeCCHHHhcCCCCCEEEEEECccCCHHHHhcC
Confidence 68999999999 333 2333332 2334566663 567899999999999987766
Q ss_pred cc
Q 019770 151 KS 152 (336)
Q Consensus 151 ~~ 152 (336)
++
T Consensus 101 ~P 102 (111)
T cd06919 101 KP 102 (111)
T ss_pred CC
Confidence 53
No 43
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=38.10 E-value=2.8e+02 Score=24.36 Aligned_cols=124 Identities=13% Similarity=0.126 Sum_probs=68.6
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCccee
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIF 159 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~f 159 (336)
-+.+++.+.|++....--.++-.+..++.++++-+.+.. ....-|++...+| .+.++.+=|.. -.+.
T Consensus 95 ~~~~lv~~~D~i~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~d~~--~v~~~~ek~~~----------~~~~ 161 (220)
T cd06426 95 TDPFLVMNGDILTNLNYEHLLDFHKENNADATVCVREYE-VQVPYGVVETEGG--RITSIEEKPTH----------SFLV 161 (220)
T ss_pred CCCEEEEcCCEeeccCHHHHHHHHHhcCCCEEEEEEEcC-CCCcceEEEECCC--EEEEEEECCCC----------CCeE
Confidence 578899999984432223466666677777777655533 3444565443333 45555542211 1346
Q ss_pred eeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhcccceEEEEeccceeeccCCCchhH
Q 019770 160 NTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLL 234 (336)
Q Consensus 160 ntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~ 234 (336)
|++..+|+-+.++.+ +. ..-+.+..++..++.--.+..++.++ ..|.-+.+.+|+..
T Consensus 162 ~~Giy~~~~~~~~~i-~~----------------~~~~~l~~~~~~~i~~~~~i~~~~~~-~~w~~igt~~dl~~ 218 (220)
T cd06426 162 NAGIYVLEPEVLDLI-PK----------------NEFFDMPDLIEKLIKEGKKVGVFPIH-EYWLDIGRPEDYEK 218 (220)
T ss_pred EEEEEEEcHHHHhhc-CC----------------CCCcCHHHHHHHHHHCCCcEEEEEeC-CeEEeCCCHHHHHh
Confidence 788777787765432 10 11123444444444322334455555 46899988888654
No 44
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase. N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase, but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repre
Probab=35.37 E-value=3.5e+02 Score=24.71 Aligned_cols=84 Identities=13% Similarity=0.162 Sum_probs=50.5
Q ss_pred ceEEEEEeCcccccccc-HHHHHHHHhcCCceeEEeeecc-cCCcceeEEEee--CCeEEEEEeecCChhhhhhhcccCC
Q 019770 80 KEYVFAANSDNLGAIVD-LKILNHLIQNKNEYCMEVTPKT-LADVKGGTLISY--EGKVQLLEIAQVPDEHVNEFKSIEK 155 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~D-p~~lg~~~~~~~~~~~evv~k~-~~dekgG~l~~~--~g~~~~vEysqlp~~~~~~~~~~~~ 155 (336)
-++++|.+.|++.. .| -.++.+|.++++++.+-+.+-. .....-|++... +|+ +.++.+-|....
T Consensus 103 ~~~~lv~~gD~~~~-~dl~~~~~~h~~~~~~~tl~~~~~~~~~~~~yg~v~~d~~~g~--v~~~~Ekp~~~~-------- 171 (257)
T cd06428 103 PSAFFVLNADVCCD-FPLQELLEFHKKHGASGTILGTEASREQASNYGCIVEDPSTGE--VLHYVEKPETFV-------- 171 (257)
T ss_pred CCCEEEEcCCeecC-CCHHHHHHHHHHcCCCEEEEEEEccccccccccEEEEeCCCCe--EEEEEeCCCCcc--------
Confidence 57899999999743 35 4678888888888776554322 122344766543 344 444444443211
Q ss_pred cceeeeeeEEEEHHHHHHH
Q 019770 156 FKIFNTNNLWVNLKAIKRL 174 (336)
Q Consensus 156 ~~~fntnni~~~l~~l~~~ 174 (336)
-.+.|+...+|+-+.+..+
T Consensus 172 ~~~~~~Giyi~~~~~~~~i 190 (257)
T cd06428 172 SDLINCGVYLFSPEIFDTI 190 (257)
T ss_pred cceEEEEEEEECHHHHHHH
Confidence 1246888788887766443
No 45
>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase. Members of this family are the enzyme glucose-1-phosphate cytidylyltransferase, also called CDP-glucose pyrophosphorylase, the product of the rfbF gene.
Probab=31.01 E-value=4.3e+02 Score=24.35 Aligned_cols=122 Identities=11% Similarity=0.098 Sum_probs=69.0
Q ss_pred ceEEEEEeCcccccccc-HHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcce
Q 019770 80 KEYVFAANSDNLGAIVD-LKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKI 158 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~D-p~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~ 158 (336)
-+++++.+.|++.. .| -.++-++.+++++..+-+++ ....-|++...+| .+.++.+-|... -.+
T Consensus 118 ~e~flv~~gD~i~~-~dl~~~~~~h~~~~~d~tl~~~~---~~~~yG~v~~d~~--~V~~~~Ekp~~~---------~~~ 182 (254)
T TIGR02623 118 DEAFCFTYGDGVAD-IDIKALIAFHRKHGKKATVTAVQ---PPGRFGALDLEGE--QVTSFQEKPLGD---------GGW 182 (254)
T ss_pred CCeEEEEeCCeEec-CCHHHHHHHHHHcCCCEEEEEec---CCCcccEEEECCC--eEEEEEeCCCCC---------CCe
Confidence 35778999999643 34 46677777888887765542 2345677765555 344555544221 124
Q ss_pred eeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc-cc--ceEEEEeccceeeccCCCchhHH
Q 019770 159 FNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF-DH--AIGCNVHRSRFLPVKATSDLLLV 235 (336)
Q Consensus 159 fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~-~~--~~~i~V~R~rF~PVKn~~dll~~ 235 (336)
-|+....++-+.+ +.++... ..+..|+++.+ ++ ..+++.+ ..|..|.+.+++..+
T Consensus 183 i~~Giyi~~~~il-~~l~~~~--------------------~~~~~d~i~~l~~~~~v~~~~~~-g~w~dIgt~~~~~~~ 240 (254)
T TIGR02623 183 INGGFFVLNPSVL-DLIDGDA--------------------TVWEQEPLETLAQRGELSAYEHS-GFWQPMDTLRDKNYL 240 (254)
T ss_pred EEEEEEEEcHHHH-hhccccC--------------------chhhhhHHHHHHhCCCEEEEeCC-CEEecCCchHHHHHH
Confidence 6788677776655 3332100 02233555443 22 2333332 248999999987655
Q ss_pred hhh
Q 019770 236 QSD 238 (336)
Q Consensus 236 ~sd 238 (336)
+..
T Consensus 241 ~~~ 243 (254)
T TIGR02623 241 EEL 243 (254)
T ss_pred HHH
Confidence 444
No 46
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=30.50 E-value=1.8e+02 Score=24.92 Aligned_cols=66 Identities=23% Similarity=0.239 Sum_probs=43.8
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe---------eCCeEEEEEeecCChhhhhhh
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS---------YEGKVQLLEIAQVPDEHVNEF 150 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~---------~~g~~~~vEysqlp~~~~~~~ 150 (336)
.|.|.|+|++| |.. |..=+++ .+.-.|++|. .++++++.=|++++++++..+
T Consensus 41 ~E~V~V~Nv~N-G~R---------------f~TYvI~---g~~GSg~I~lNGAAAr~~~~GD~vII~ay~~~~~~e~~~~ 101 (126)
T PRK05449 41 NEKVQIVNVNN-GAR---------------FETYVIA---GERGSGVICLNGAAARLVQVGDLVIIAAYAQMDEEEAKTH 101 (126)
T ss_pred CCEEEEEECCC-CcE---------------EEEEEEE---cCCCCCEEEeCCHHHhcCCCCCEEEEEECccCCHHHHhcC
Confidence 68999999999 333 2223332 2333566763 567899999999999988766
Q ss_pred cccCCcceeeeeeEEE
Q 019770 151 KSIEKFKIFNTNNLWV 166 (336)
Q Consensus 151 ~~~~~~~~fntnni~~ 166 (336)
++ +..+.|-+|-..
T Consensus 102 ~P--~vv~vd~~N~i~ 115 (126)
T PRK05449 102 KP--KVVFVDEDNRIK 115 (126)
T ss_pred CC--EEEEECCCCCEE
Confidence 53 455566655443
No 47
>COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=30.25 E-value=94 Score=28.04 Aligned_cols=64 Identities=19% Similarity=0.334 Sum_probs=40.4
Q ss_pred eEEeCCCcccHHHHhhhcC-CCCCccccceEEEecceEEccCeEEEEE-EEEEcCCCCeEEcCCCCe
Q 019770 260 TIELGPEFKKVGNFLSRFK-SIPSIIELDSLKVTGDVWFGANITLKGK-VTIAAKSGEKLEIPDGAV 324 (336)
Q Consensus 260 ~I~L~~~f~~~~~~~~r~~-~~p~i~~~~~L~V~Gdv~fg~~v~l~G~-v~i~a~~~~~~~ip~g~~ 324 (336)
+|.++|+=.+.+++.++|. ..-.--.--.+.|.|+-+|+-. .-+|. +.|.+..|-=|.||+|+.
T Consensus 70 vvsv~~~~pk~del~akF~~EH~H~d~EvRy~vaG~GiF~v~-~~d~~~~~i~c~~gDLI~vP~gi~ 135 (181)
T COG1791 70 VVSVSPSNPKLDELRAKFLQEHLHTDDEVRYFVAGEGIFDVH-SPDGKVYQIRCEKGDLISVPPGIY 135 (181)
T ss_pred EEEeCCCCccHHHHHHHHHHHhccCCceEEEEEecceEEEEE-CCCCcEEEEEEccCCEEecCCCce
Confidence 4677666556677777773 1122222335889999999421 12444 467788888899999863
No 48
>cd04645 LbH_gamma_CA_like Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.
Probab=29.52 E-value=84 Score=26.64 Aligned_cols=18 Identities=6% Similarity=0.265 Sum_probs=9.6
Q ss_pred eEEccCeEEEEEEEEEcC
Q 019770 295 VWFGANITLKGKVTIAAK 312 (336)
Q Consensus 295 v~fg~~v~l~G~v~i~a~ 312 (336)
+++|+++.+...++|.+.
T Consensus 39 ~~IG~~~~I~~~~~I~~~ 56 (153)
T cd04645 39 IRIGERTNIQDGSVLHVD 56 (153)
T ss_pred eEECCCCEECCCcEEecC
Confidence 456666666555545443
No 49
>COG0663 PaaY Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]
Probab=28.69 E-value=85 Score=28.31 Aligned_cols=44 Identities=23% Similarity=0.330 Sum_probs=27.9
Q ss_pred ceEEEecceEEccCeEEEEEEEEEcCCCCeEEcCCCCee-ecceee
Q 019770 287 DSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVL-ENKEIN 331 (336)
Q Consensus 287 ~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l-~n~~~~ 331 (336)
.+-+|-|||..|+++.+==..+|+++. ++|.|-+++-+ +|.++.
T Consensus 22 ~~A~viGdV~Ig~~vsIw~~aVlRgD~-~~I~IG~~tNIQDg~ViH 66 (176)
T COG0663 22 PSATVIGDVRIGAGVSIWPGAVLRGDV-EPIRIGARTNIQDGVVIH 66 (176)
T ss_pred CCCEEEEeEEECCCCEECCceEEEccC-CceEECCCceecCCeEEe
Confidence 345688888888888774444466665 66666666644 334443
No 50
>TIGR02287 PaaY phenylacetic acid degradation protein PaaY. Members of this family are located next to other genes organized into apparent operons for phenylacetic acid degradation. PaaY is located near the end of these gene clusters and often next to PaaX, a transcriptional regulator.
Probab=26.87 E-value=88 Score=28.23 Aligned_cols=20 Identities=20% Similarity=0.341 Sum_probs=10.1
Q ss_pred EecceEEccCeEEEEEEEEE
Q 019770 291 VTGDVWFGANITLKGKVTIA 310 (336)
Q Consensus 291 V~Gdv~fg~~v~l~G~v~i~ 310 (336)
|.|+|+.|+++.+.-.++|.
T Consensus 23 I~G~V~IG~~~~I~~~a~I~ 42 (192)
T TIGR02287 23 LIGDVILGKRCYVGPLASLR 42 (192)
T ss_pred EEeeEEECCCCEECCCcEEE
Confidence 45555555555554333343
No 51
>PLN02472 uncharacterized protein
Probab=26.76 E-value=79 Score=29.80 Aligned_cols=35 Identities=9% Similarity=0.058 Sum_probs=18.1
Q ss_pred EEecceEEccCeEEEEEEEEEcCCCCeEEcCCCCee
Q 019770 290 KVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVL 325 (336)
Q Consensus 290 ~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l 325 (336)
++.|+|+.|+++.+...++|+++.+ +|.|-+++.|
T Consensus 73 ~i~G~V~Ig~~a~I~~gavirgd~~-~I~IG~~t~I 107 (246)
T PLN02472 73 VLAGQVTVWDGASVWNGAVLRGDLN-KITVGFCSNV 107 (246)
T ss_pred EEecCEEECCCCEEcCCCEEecCCc-ceEECCCCEE
Confidence 4566666666666655455554432 3444444444
No 52
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=26.26 E-value=2.3e+02 Score=24.21 Aligned_cols=66 Identities=17% Similarity=0.196 Sum_probs=43.5
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe---------eCCeEEEEEeecCChhhhhhh
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS---------YEGKVQLLEIAQVPDEHVNEF 150 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~---------~~g~~~~vEysqlp~~~~~~~ 150 (336)
.|.|.|+|++| |+. |..-+++ .++-.|++|. .++++++.=|++++++++..+
T Consensus 41 ~E~V~V~Nv~N-G~R---------------f~TYvI~---G~~GSg~I~lNGAAArl~~~GD~VII~sy~~~~~~e~~~~ 101 (126)
T TIGR00223 41 NEKVDIVNVNN-GKR---------------FSTYAIA---GKRGSRIICVNGAAARCVSVGDIVIIASYVTMPDEEARTH 101 (126)
T ss_pred CCEEEEEECCC-CcE---------------EEEEEEE---cCCCCCEEEeCCHHHhcCCCCCEEEEEECCcCCHHHHhcC
Confidence 68999999999 333 2333332 2334577763 467899999999999988766
Q ss_pred cccCCcceeeeeeEEE
Q 019770 151 KSIEKFKIFNTNNLWV 166 (336)
Q Consensus 151 ~~~~~~~~fntnni~~ 166 (336)
++ +..+.|-+|-..
T Consensus 102 ~P--~vv~vd~~N~i~ 115 (126)
T TIGR00223 102 RP--NVAYFEGDNEIK 115 (126)
T ss_pred CC--EEEEECCCCCEE
Confidence 53 444556555433
No 53
>PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown. They contain the conserved barrel domain of the 'cupin' superfamily and members are specific to plants and bacteria.; PDB: 1RC6_A 3MYX_A 1O5U_A 2K9Z_A 1LKN_A 3ES4_A 1SFN_B 3BCW_A.
Probab=25.29 E-value=78 Score=23.84 Aligned_cols=23 Identities=35% Similarity=0.618 Sum_probs=15.5
Q ss_pred eEEEEEEEEEcCCCCeEEcCCCC
Q 019770 301 ITLKGKVTIAAKSGEKLEIPDGA 323 (336)
Q Consensus 301 v~l~G~v~i~a~~~~~~~ip~g~ 323 (336)
.+|.|.|+|...+|++.++..|.
T Consensus 30 ~vleG~v~it~~~G~~~~~~aGD 52 (74)
T PF05899_consen 30 YVLEGEVTITDEDGETVTFKAGD 52 (74)
T ss_dssp EEEEEEEEEEETTTEEEEEETTE
T ss_pred EEEEeEEEEEECCCCEEEEcCCc
Confidence 56777777777677666665554
No 54
>cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2. N-terminal domain of epsilon subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit epsilon shares sequence similarity with gamma subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
Probab=24.89 E-value=2.8e+02 Score=24.72 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=34.8
Q ss_pred eEEEEEeCcccccccc-HHHHHHHHhc-----CCceeEEeeecccCCc-----ceeEEEeeCCeEEEEEeecCCh
Q 019770 81 EYVFAANSDNLGAIVD-LKILNHLIQN-----KNEYCMEVTPKTLADV-----KGGTLISYEGKVQLLEIAQVPD 144 (336)
Q Consensus 81 ~yi~v~nvDNL~~~~D-p~~lg~~~~~-----~~~~~~evv~k~~~de-----kgG~l~~~~g~~~~vEysqlp~ 144 (336)
+++.+.+.|++.. .| -.++.+|.++ ++++.+-+.+-..+.. .-|++...+..-+++.+.+-|.
T Consensus 105 ~~flv~~gD~i~~-~dl~~~l~~h~~~~~~~~~a~~t~~~~~~~~~~~~~~~~~~~vv~~d~~~~~v~~~~ekp~ 178 (217)
T cd04197 105 GDFILVSGDVVSN-IDLKEILEEHKERRKKDKNAIMTMVLKEASPPHRTRRTGEEFVIAVDPKTSRLLHYEELPG 178 (217)
T ss_pred CCEEEEeCCeeec-cCHHHHHHHHHHhhccccCceEEEEEEeCCCccccccCCCceEEEEcCCCCcEEEEecccC
Confidence 5677899999653 45 3577888763 6766654444333221 1355544322234556666553
No 55
>cd00208 LbetaH Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.
Probab=24.86 E-value=1.1e+02 Score=21.83 Aligned_cols=19 Identities=26% Similarity=0.436 Sum_probs=8.3
Q ss_pred ecceEEccCeEEEEEEEEE
Q 019770 292 TGDVWFGANITLKGKVTIA 310 (336)
Q Consensus 292 ~Gdv~fg~~v~l~G~v~i~ 310 (336)
.+.++.|+++.+...++|.
T Consensus 16 ~~~~~Ig~~~~I~~~~~i~ 34 (78)
T cd00208 16 RGPVVIGDNVNIGPGAVIG 34 (78)
T ss_pred eCcEEECCCCEECCCCEEE
Confidence 3344444444444444333
No 56
>PRK13627 carnitine operon protein CaiE; Provisional
Probab=24.68 E-value=95 Score=28.11 Aligned_cols=26 Identities=23% Similarity=0.378 Sum_probs=16.9
Q ss_pred EEEecceEEccCeEEEEEEEEEcCCC
Q 019770 289 LKVTGDVWFGANITLKGKVTIAAKSG 314 (336)
Q Consensus 289 L~V~Gdv~fg~~v~l~G~v~i~a~~~ 314 (336)
-+|.|+|..|+++.+--.++|.++.|
T Consensus 23 a~I~g~V~IG~~~~I~~~avIrgd~~ 48 (196)
T PRK13627 23 AVLIGDVIVGAGVYIGPLASLRGDYG 48 (196)
T ss_pred CEEECceEECCCCEECCCCEEecCCc
Confidence 44677777777777765566655543
No 57
>COG1535 EntB Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.37 E-value=64 Score=29.52 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=31.1
Q ss_pred cCCCCCccc------hhhhhhcChHHHHHHcCceEEEEEeCcc
Q 019770 54 WYPPGHGDV------FPSLMNSGKLDALISQGKEYVFAANSDN 90 (336)
Q Consensus 54 ~~P~GhGdi------~~aL~~sGlld~l~~~G~~yi~v~nvDN 90 (336)
..-||-+|+ |.|+++|.+++.|.+.|+..+.|..|=-
T Consensus 111 ~l~P~~~D~vL~kwrYsAF~~s~Llq~lr~~grdQLIItGVya 153 (218)
T COG1535 111 ELAPGADDTVLTKWRYSAFHRSPLLQMLREKGRDQLIITGVYA 153 (218)
T ss_pred hcCCCCCceEEeeeehhhhhcChHHHHHHHcCCCcEEEeehhh
Confidence 366778886 8999999999999999999888876643
No 58
>PF04519 Bactofilin: Polymer-forming cytoskeletal; InterPro: IPR007607 This family contains several uncharacterised hypothetical proteins.
Probab=24.13 E-value=1e+02 Score=24.36 Aligned_cols=16 Identities=19% Similarity=0.617 Sum_probs=6.2
Q ss_pred EecceEEccCeEEEEE
Q 019770 291 VTGDVWFGANITLKGK 306 (336)
Q Consensus 291 V~Gdv~fg~~v~l~G~ 306 (336)
++|+..+..++.++|.
T Consensus 11 i~G~i~~~~~v~i~G~ 26 (101)
T PF04519_consen 11 IEGDISSDGDVRIDGR 26 (101)
T ss_pred EEEEEEECcEEEEEEE
Confidence 3333333333333333
No 59
>PRK10824 glutaredoxin-4; Provisional
Probab=22.91 E-value=58 Score=27.14 Aligned_cols=39 Identities=26% Similarity=0.506 Sum_probs=27.7
Q ss_pred cCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHHc-CceE
Q 019770 29 QSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQ-GKEY 82 (336)
Q Consensus 29 Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~~-G~~y 82 (336)
|.++|.+.-+|... |..|...+|+++|-|++++++ |.+|
T Consensus 68 ~~TVPQIFI~G~~I---------------GG~ddl~~l~~~G~L~~lL~~~~~~~ 107 (115)
T PRK10824 68 WPTFPQLWVDGELV---------------GGCDIVIEMYQRGELQQLIKETAAKY 107 (115)
T ss_pred CCCCCeEEECCEEE---------------cChHHHHHHHHCCCHHHHHHHHHhhh
Confidence 45677776665422 777889999999999999854 4433
No 60
>PF15235 GRIN_C: G protein-regulated inducer of neurite outgrowth C-terminus
Probab=22.84 E-value=38 Score=29.26 Aligned_cols=36 Identities=31% Similarity=0.301 Sum_probs=29.3
Q ss_pred HHHHcCceEEEEEeCccccccccHHHHHHHHhcCCceeEEee
Q 019770 74 ALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVT 115 (336)
Q Consensus 74 ~l~~~G~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv 115 (336)
.|=++|-.|=.+ ||.+||..||..|++.+++-++=-
T Consensus 48 ~WDe~GMTWEVY------GAs~DpEvLG~AIQkHLE~qi~e~ 83 (137)
T PF15235_consen 48 SWDEQGMTWEVY------GASVDPEVLGMAIQKHLERQIEEH 83 (137)
T ss_pred eecCCCceEEEe------ccccCHHHHHHHHHHHHHHHHHHh
Confidence 366789888554 999999999999999888766544
No 61
>cd04652 LbH_eIF2B_gamma_C eIF-2B gamma subunit, C-terminal Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon). eIF2B is important for regenerating GTP-bound eIF2 during the initiation process. This event is obligatory for eIF2 to bind initiator methionyl-tRNA, forming the ternary initiation complex. The eIF-2B gamma subunit contains an N-terminal domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH domain with 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). The epsilon and gamma subunits form the catalytic subcomplex of eIF-2B, which binds eIF2 and catalyzes guanine nucleotide exchange.
Probab=22.49 E-value=1.2e+02 Score=22.63 Aligned_cols=39 Identities=13% Similarity=0.061 Sum_probs=23.2
Q ss_pred EecceEEccCeEEEEEEEEEcCCCCeEEcCCCCeeecceeeCCC
Q 019770 291 VTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPG 334 (336)
Q Consensus 291 V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l~n~~~~~~~ 334 (336)
|...++.|.+..|.+.++- ....|.+++.|+|.++..+.
T Consensus 36 i~~~~~ig~~~~l~~svi~-----~~~~i~~~~~v~~~ii~~~~ 74 (81)
T cd04652 36 IMDNVTIEDGCTLENCIIG-----NGAVIGEKCKLKDCLVGSGY 74 (81)
T ss_pred EeCCCEECCCCEEeccEEe-----CCCEECCCCEEccCEECCCc
Confidence 4445566666666654432 23456777778777766544
No 62
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=21.69 E-value=3.2e+02 Score=23.30 Aligned_cols=64 Identities=23% Similarity=0.299 Sum_probs=41.9
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe---------eCCeEEEEEeecCChhhhhhh
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS---------YEGKVQLLEIAQVPDEHVNEF 150 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~---------~~g~~~~vEysqlp~~~~~~~ 150 (336)
.|.+.+.|++| |+. |..=+++ .++-.|++|. .++++++.=|+|++++++...
T Consensus 40 ~EkV~I~N~nN-GaR---------------f~TYvI~---g~rGSg~I~lNGAAArl~~~GD~VII~sy~~~~e~e~~~~ 100 (126)
T COG0853 40 NEKVDIVNVNN-GAR---------------FSTYVIA---GERGSGVICLNGAAARLVQVGDLVIIMSYAQMSEEEAKTH 100 (126)
T ss_pred CceEEEEECCC-CcE---------------EEEEEEE---ccCCCcEEEechHHHhhCCCCCEEEEEEcccCCHHHHhcc
Confidence 57899999998 333 3333332 1223456653 577899999999999988766
Q ss_pred cccCCcceeeeeeE
Q 019770 151 KSIEKFKIFNTNNL 164 (336)
Q Consensus 151 ~~~~~~~~fntnni 164 (336)
++ +..++|-.|-
T Consensus 101 ~P--kvv~~d~~N~ 112 (126)
T COG0853 101 KP--KVVVVDEKNE 112 (126)
T ss_pred CC--eEEEECCCCc
Confidence 53 4555666554
No 63
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=21.32 E-value=5.4e+02 Score=22.23 Aligned_cols=82 Identities=12% Similarity=0.140 Sum_probs=50.5
Q ss_pred CceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEee-CCeEEEEEeecCChhhhhhhcccCCcc
Q 019770 79 GKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISY-EGKVQLLEIAQVPDEHVNEFKSIEKFK 157 (336)
Q Consensus 79 G~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~-~g~~~~vEysqlp~~~~~~~~~~~~~~ 157 (336)
.-+++.+.+.|++...-.-.++.++..++++.++-+.+.. ....-|.+... +| .++++.+-|.... -.
T Consensus 95 ~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~d~~~--~v~~~~ek~~~~~--------~~ 163 (217)
T cd04181 95 GDDDFLVVNGDVLTDLDLSELLRFHREKGADATIAVKEVE-DPSRYGVVELDDDG--RVTRFVEKPTLPE--------SN 163 (217)
T ss_pred CCCCEEEEECCeecCcCHHHHHHHHHhcCCCEEEEEEEcC-CCCcceEEEEcCCC--cEEEEEECCCCCC--------CC
Confidence 4678999999995433334566777788888877766554 34455665443 24 4455555443211 12
Q ss_pred eeeeeeEEEEHHHH
Q 019770 158 IFNTNNLWVNLKAI 171 (336)
Q Consensus 158 ~fntnni~~~l~~l 171 (336)
+.|++..+|+-+.+
T Consensus 164 ~~~~Giy~~~~~~~ 177 (217)
T cd04181 164 LANAGIYIFEPEIL 177 (217)
T ss_pred EEEEEEEEECHHHH
Confidence 46888777777665
No 64
>PF09601 DUF2459: Protein of unknown function (DUF2459); InterPro: IPR011727 This conserved hypothetical protein of unknown function is predominantly found in proteobacteria. Its function is unknown and its genome context is not well-conserved. It is found amid urease genes in at least one species.
Probab=20.56 E-value=32 Score=30.76 Aligned_cols=35 Identities=17% Similarity=0.407 Sum_probs=22.3
Q ss_pred CCeEEEEEeecCChhhhhhhcccCCcceeeeeeEEEE
Q 019770 131 EGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVN 167 (336)
Q Consensus 131 ~g~~~~vEysqlp~~~~~~~~~~~~~~~fntnni~~~ 167 (336)
+|+++.+ ....-..+. =+.+.++|.+|||||-|.+
T Consensus 119 ~g~~~~i-~~~y~~~d~-Fy~A~G~Y~l~~TCNtWta 153 (173)
T PF09601_consen 119 DGRPIPI-GPGYGPDDA-FYEAKGRYSLFNTCNTWTA 153 (173)
T ss_pred CCCeEEe-ccccCCCCe-eEeeccceEeecCcHHHHH
Confidence 5666665 222222222 3667799999999999863
No 65
>cd05824 LbH_M1P_guanylylT_C Mannose-1-phosphate guanylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Mannose-1-phosphate guanylyltransferase is also known as GDP-mannose pyrophosphorylase. It catalyzes the synthesis of GDP-mannose from GTP and mannose-1-phosphate, and is involved in the maintenance of cell wall integrity and glycosylation. Similar to ADP-glucose pyrophosphorylase, it contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain, presumably with 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=20.45 E-value=1.1e+02 Score=22.84 Aligned_cols=8 Identities=13% Similarity=0.202 Sum_probs=3.1
Q ss_pred CCCCeeec
Q 019770 320 PDGAVLEN 327 (336)
Q Consensus 320 p~g~~l~n 327 (336)
.+++.|.+
T Consensus 44 ~~~~~i~~ 51 (80)
T cd05824 44 RDHSWVKS 51 (80)
T ss_pred CCCCEEeC
Confidence 33343333
No 66
>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]
Probab=20.10 E-value=58 Score=32.48 Aligned_cols=100 Identities=15% Similarity=0.166 Sum_probs=74.2
Q ss_pred CchHHHHHHHHHcCCCCce-eEEEecCCcee---eecCCCcccCCCCCCC-CcccCCCCCccchhhhhhcChHHHHHHcC
Q 019770 5 NTHDDTSKIIEKYSKSNVE-IHTFNQSQYPR---LCADDFVPLPCKGKTD-KDGWYPPGHGDVFPSLMNSGKLDALISQG 79 (336)
Q Consensus 5 ~T~~~T~~~lek~~~fgl~-v~~F~Q~~~P~---l~~~~~~~~~~~~~~~-~~~~~P~GhGdi~~aL~~sGlld~l~~~G 79 (336)
+....+.+||.+|..-|+| |-+=.++-+-. +...|..+|+-|.... .+.--=||||.-..+|...++|=+....|
T Consensus 229 ~~~sqi~efl~~y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~tYYd~~~~R~~~~~e~ld~Lr~~~IL~D~~~~~ 308 (363)
T COG3185 229 DDKSQIGEFLREYRGEGIQHIAFGTDDIYATVAALRERGVKFLPIPETYYDDLDARFPLHGEFLDALRELEILYDGDGGG 308 (363)
T ss_pred CchhHHHHHHHHhCCCcceEEEecccHHHHHHHHHHHcCCccCCCchhHHHHHhhcCCCChHHHHHHHhcCeEeecCCCC
Confidence 3445689999999999998 66666665544 4446887887664322 35556899999999999999999998887
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccC
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLA 120 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~ 120 (336)
-+++++|.-.=++ ++=.|++.|+..
T Consensus 309 ~~lLQift~~~~g----------------~~FFEiIeRR~g 333 (363)
T COG3185 309 GELLQIFTRTFIG----------------PFFFEIIERRKG 333 (363)
T ss_pred cEEEEEecccccC----------------ceeEEEEEeccc
Confidence 7999998654222 456799999654
Done!