Query 019770
Match_columns 336
No_of_seqs 168 out of 594
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 06:50:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019770.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019770hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r3i_A UTP--glucose-1-phosphat 100.0 3E-104 9E-109 800.0 25.0 336 1-336 182-525 (528)
2 3gue_A UTP-glucose-1-phosphate 100.0 9E-101 3E-105 769.1 28.4 330 1-332 131-483 (484)
3 2icy_A Probable UTP-glucose-1- 100.0 6.8E-88 2.3E-92 678.8 31.4 336 1-336 134-469 (469)
4 2i5k_A UTP--glucose-1-phosphat 100.0 1.6E-84 5.3E-89 657.4 31.1 335 1-336 147-485 (488)
5 2oeg_A UTP-glucose-1-phosphate 100.0 4.5E-85 1.5E-89 662.1 25.8 330 1-332 130-488 (505)
6 3ogz_A UDP-sugar pyrophosphory 100.0 6.5E-74 2.2E-78 587.2 20.7 320 1-330 168-573 (630)
7 3oc9_A UDP-N-acetylglucosamine 100.0 3.9E-67 1.3E-71 517.5 17.4 261 1-269 99-385 (405)
8 2yqc_A UDP-N-acetylglucosamine 100.0 1.7E-60 5.8E-65 481.8 16.6 250 1-253 168-452 (486)
9 1jv1_A Glcnac1P uridyltransfer 100.0 2.7E-57 9.3E-62 460.1 19.7 249 1-252 165-438 (505)
10 3st8_A Bifunctional protein GL 92.8 2.8 9.6E-05 41.4 15.7 110 80-210 111-223 (501)
11 3brk_X Glucose-1-phosphate ade 87.0 11 0.00037 36.0 14.0 151 72-239 118-283 (420)
12 1yp2_A Glucose-1-phosphate ade 85.9 25 0.00086 33.7 17.7 152 73-240 129-295 (451)
13 1hm9_A GLMU, UDP-N-acetylgluco 68.4 83 0.0029 29.9 15.6 90 80-176 102-194 (468)
14 4fce_A Bifunctional protein GL 66.3 89 0.0031 29.5 14.8 132 80-236 99-239 (459)
15 3oam_A 3-deoxy-manno-octuloson 53.5 35 0.0012 30.1 7.4 113 55-176 72-197 (252)
16 2v0h_A Bifunctional protein GL 52.6 1.5E+02 0.0052 27.8 15.8 136 80-239 96-239 (456)
17 1uhe_A Aspartate 1-decarboxyla 38.3 39 0.0013 26.4 4.4 62 80-163 16-86 (97)
18 1vc3_B L-aspartate-alpha-decar 34.4 52 0.0018 25.7 4.5 63 80-163 17-88 (96)
19 1pqh_A Aspartate 1-decarboxyla 29.9 56 0.0019 27.2 4.3 67 80-167 58-133 (143)
20 2o8m_C Protease; NS3, NS4A, vi 28.9 51 0.0018 19.5 2.8 22 301-325 5-26 (26)
21 3kwd_A Carbon dioxide concentr 28.1 37 0.0013 29.1 3.1 36 290-325 53-88 (213)
22 3plx_B Aspartate 1-decarboxyla 24.9 70 0.0024 25.2 3.8 62 80-163 17-87 (102)
23 3tv0_A Dynactin subunit 6; LEF 24.5 47 0.0016 27.9 3.1 36 289-325 25-60 (194)
No 1
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=100.00 E-value=2.8e-104 Score=799.95 Aligned_cols=336 Identities=57% Similarity=0.958 Sum_probs=316.3
Q ss_pred CCCcCchHHHHHHHHHcCCCCceeEEEecCCceeeecCCCcccCCCCC---CCCcccCCCCCccchhhhhhcChHHHHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGK---TDKDGWYPPGHGDVFPSLMNSGKLDALIS 77 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~v~~F~Q~~~P~l~~~~~~~~~~~~~---~~~~~~~P~GhGdi~~aL~~sGlld~l~~ 77 (336)
|||+.||++|++||++|+|||.+|++|+|+++||++.+|+++++++.+ +++++|+|+||||+|.||++||+||+|++
T Consensus 182 MTS~~T~~~T~~~f~k~~~fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~ 261 (528)
T 3r3i_A 182 MNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIG 261 (528)
T ss_dssp EECTTTHHHHHSSCGGGTTSSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHH
T ss_pred EeccchhHHHHHHHHhcCccCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHh
Confidence 999999999999999999999999999999999999999999988532 37899999999999999999999999999
Q ss_pred cCceEEEEEeCccccccccHHHHHHHHhc----CCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhccc
Q 019770 78 QGKEYVFAANSDNLGAIVDLKILNHLIQN----KNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSI 153 (336)
Q Consensus 78 ~G~~yi~v~nvDNL~~~~Dp~~lg~~~~~----~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~ 153 (336)
+|+||+|++|+||+++++||.||||++.+ +++|+||||+|+.++||||++|+++|+++++||+|+|+++++++++.
T Consensus 262 ~Gieyi~v~nvDNlga~vDp~~Lg~~~~~~~~~~~d~~~kVv~Kt~~dek~Gvl~~~dGk~~vvEyseip~e~~~~~~g~ 341 (528)
T 3r3i_A 262 EGKEYIFVSNIDNLGATVDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSV 341 (528)
T ss_dssp TTCCEEEEEETTBTTCCCCHHHHHHHSSCSSSCCCSEEEEECCCCTTCCSSCEEECSSSSCEEECTTSSCGGGTTTSSCS
T ss_pred cCCEEEEEEccCCcccccCHHHHHHHHhcccccCCcEEEEEeEccccCCcccEEEEECCeEEEEEecCCChhHhhccCCc
Confidence 99999999999998888999999999998 99999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccC-CCCceehhhhhchHHhhcccceEEEEeccceeeccCCCch
Q 019770 154 EKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD-GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDL 232 (336)
Q Consensus 154 ~~~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~-~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dl 232 (336)
.+|++||||||||+|++|+++++...+.||+|+|+|+++ +++++||||||||+|++|+++.+++|||+||+|||||+||
T Consensus 342 ~~f~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f~~~~~i~VpR~rF~PvKn~sdL 421 (528)
T 3r3i_A 342 SKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDL 421 (528)
T ss_dssp SSCCCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTSSSCCCEECCGGGCCBCCSHHHH
T ss_pred ccCCeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhccCcEEEEEehHHcccccchHHH
Confidence 999999999999999999999998788999999999998 8999999999999999999999999999999999999999
Q ss_pred hHHhhhhhccccCeeEecCCcCCCCCCeEEeCCCcccHHHHhhhcCCCCCccccceEEEecceEEccCeEEEEEEEEEcC
Q 019770 233 LLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAK 312 (336)
Q Consensus 233 l~~~sd~y~~~~g~~~~~~~r~~~~~P~I~L~~~f~~~~~~~~r~~~~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~ 312 (336)
|++|||+|.+++|.++++|.|.++..|.|+||++|+++++|++||+++|+|++|++|||+|||+||+||+|+|+|+|+|+
T Consensus 422 ll~~Sdly~l~~g~l~~~~~r~~~~~P~v~L~~~~~~v~~f~~rf~~iP~l~~~~~LtV~Gdv~fg~~v~l~G~v~i~~~ 501 (528)
T 3r3i_A 422 LLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIAN 501 (528)
T ss_dssp HHHHSTTSEEETTEEECCSSCSSCCCCEEEECTTSCSHHHHHHHCSSCCEEEEEEEEEEESEEECCTTCEEEEEEEEECC
T ss_pred HHHhcceeEeeCCeEEecccccCCCCCEEEeCcccCcHHHHHHhCCCCCCcccCCEEEEecceEECCCcEEEEEEEEEcC
Confidence 99999999999999999999988889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEcCCCCeeecceeeCCCCC
Q 019770 313 SGEKLEIPDGAVLENKEINGPGDL 336 (336)
Q Consensus 313 ~~~~~~ip~g~~l~n~~~~~~~~~ 336 (336)
+|++++||||++|||++|+||++|
T Consensus 502 ~g~~~~ip~g~~len~~v~g~~~~ 525 (528)
T 3r3i_A 502 HGDRIDIPPGAVLENKIVSGNLRI 525 (528)
T ss_dssp TTCEEECCTTCEEEEEEEC-----
T ss_pred CCCceecCCCCEEeccEEeccccc
Confidence 999999999999999999999987
No 2
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=100.00 E-value=9.4e-101 Score=769.06 Aligned_cols=330 Identities=38% Similarity=0.637 Sum_probs=315.6
Q ss_pred CCCcCchHHHHHHHHHcCCCCc---eeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNV---EIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALIS 77 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl---~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~ 77 (336)
|||+.||++|++||++|+|||+ +|++|+|+++||++.+|+.++.++.+ ++++|+|+||||+|.||++||+|++|++
T Consensus 131 MTS~~T~~~T~~~~~k~~~Fgl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~-~~i~~~P~GhGdiy~aL~~sGiLd~l~~ 209 (484)
T 3gue_A 131 MNSFSTSGETKNFLRKYPTLYEVFDSDIELMQNRVPKIRQDNFFPVTYEAD-PTCEWVPPGHGDVYTVLYSSGKLDYLLG 209 (484)
T ss_dssp EECTTTHHHHHHHGGGCHHHHTTCCCCCEEECCCEECEETTTCCBCCCTTC-GGGGEECCCGGGHHHHHHHHSHHHHHHH
T ss_pred ECCcchhHHHHHHHHhCcccCCCccceEEEEeCceeeEecCCCceeecCCC-CceeeccCCchHHHHHHHhCCcHHHHHH
Confidence 9999999999999999999998 59999999999999999987765532 6899999999999999999999999999
Q ss_pred cCceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEee----------CCeEEEEEeecCChhhh
Q 019770 78 QGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISY----------EGKVQLLEIAQVPDEHV 147 (336)
Q Consensus 78 ~G~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~----------~g~~~~vEysqlp~~~~ 147 (336)
+|+||+|++|+|||++++||.||||+++++++|+||||+|+.+|||||++|++ +|+++++||+|+|++++
T Consensus 210 ~Gieyi~v~~vDNL~a~~Dp~~lG~~~~~~~d~~~kvv~Kt~~dekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~ 289 (484)
T 3gue_A 210 KGYRYMFISNGDNLGATLDVRLLDYMHEKQLGFLMEVCRRTESDKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDE 289 (484)
T ss_dssp TTCCEEEEEETTCTTCCCCHHHHHHHHHTTCSEEEEEEECCTTCCSSEEEEEEC--------CCCEEEEEEGGGSCGGGH
T ss_pred cCCEEEEEEcCCCcccccCHHHHHHHHhcCCCEEEEEEECCCCCCceeEEEEEccccccccCCCCCEEEEEeccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred hhhcccCCcceeeeeeEEEEHHHHHHHHHhc--CcCcceeecccccC-----CCCceehhhhhchHHhhcccceEEEEec
Q 019770 148 NEFKSIEKFKIFNTNNLWVNLKAIKRLVEAD--ALKMEIIPNPKEVD-----GIKVLQLETAAGAAIRFFDHAIGCNVHR 220 (336)
Q Consensus 148 ~~~~~~~~~~~fntnni~~~l~~l~~~~~~~--~~~lp~~vn~K~v~-----~~~~~qlE~~~~d~~~~~~~~~~i~V~R 220 (336)
++|++.+++++|||||||++|++|+++++.. .+.||+|+|+|+++ +++++||||||||+|++|+++.+++|||
T Consensus 290 ~~f~~~~g~~~FNtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~~~~~~ieV~R 369 (484)
T 3gue_A 290 DSFQNIAKHCFFNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLFDRSEAVVVPR 369 (484)
T ss_dssp HHHTCTTTSCEEEEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTSSSEEEEECCG
T ss_pred hhhcCCCCceEeEeeeEEEEHHHHHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhCCccEEEEECh
Confidence 9999999999999999999999999999874 57899999999996 5789999999999999999999999999
Q ss_pred cceeeccCCCchhHHhhhhhccccC-eeEecCCcCCCCCCeEEeCC-CcccHHHHhhhcCC-CCCccccceEEEecceEE
Q 019770 221 SRFLPVKATSDLLLVQSDLYTLADG-FVTRNEARKNPANPTIELGP-EFKKVGNFLSRFKS-IPSIIELDSLKVTGDVWF 297 (336)
Q Consensus 221 ~rF~PVKn~~dll~~~sd~y~~~~g-~~~~~~~r~~~~~P~I~L~~-~f~~~~~~~~r~~~-~p~i~~~~~L~V~Gdv~f 297 (336)
+||+|||||+||+++|||+|.+++| .++++|.| .+..|+|+|++ +|+++++|++||++ +|||++|+||+|+|||+|
T Consensus 370 ~rF~PvKn~sdLl~~~Sdly~l~~~~~l~~~~~~-~~~~P~v~L~~~~~~~v~~f~~rf~~giPsl~~~~~L~V~Gdv~f 448 (484)
T 3gue_A 370 ERFAPVKTCSDLLALRSDAYQVTEDQRLVLCEER-NGKPPAIDLDGEHYKMIDGFEKLVKGGVPSLRQCTSLTVRGLVEF 448 (484)
T ss_dssp GGCCCCSSHHHHHHHHSTTEEECTTSCEEECGGG-TTCCCEEEECTTTSSSHHHHHHHHTTCCCBCTTEEEEEEESSEEE
T ss_pred hhccccccchHHHHHhhhceeccCCceEEecccc-CCCCCeEEECchhcCcHHHHHHhcCCCCCChhhCCEEEEecceEE
Confidence 9999999999999999999999994 89999999 44789999986 59999999999997 999999999999999999
Q ss_pred ccCeEEEEEEEEEcCCCCeEEcCCCCeeecceeeC
Q 019770 298 GANITLKGKVTIAAKSGEKLEIPDGAVLENKEING 332 (336)
Q Consensus 298 g~~v~l~G~v~i~a~~~~~~~ip~g~~l~n~~~~~ 332 (336)
|+||+|+|+|+|+|++|++++||||++|+|++|+-
T Consensus 449 g~~v~l~G~v~i~~~~g~~~~ip~g~~l~~~~~~~ 483 (484)
T 3gue_A 449 GADVSVRGNVVIKNLKEEPLIIGSGRVLDNEVVVV 483 (484)
T ss_dssp CTTCEEEEEEEEEECSSSCEEECTTCEEESCEEEE
T ss_pred CCCcEEEEEEEEEcCCCCeeecCCCCEecceecCC
Confidence 99999999999999999999999999999999874
No 3
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=100.00 E-value=6.8e-88 Score=678.83 Aligned_cols=336 Identities=87% Similarity=1.327 Sum_probs=323.8
Q ss_pred CCCcCchHHHHHHHHHcCCCCceeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHHcCc
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGK 80 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~~G~ 80 (336)
|||+.||+.|++||++|++||++|++|+|+++||++.+|+++++++.+++.++|+|+||||+|.+|++||+|++|+++|+
T Consensus 134 mts~~t~e~t~~~f~~~~~fG~~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~ 213 (469)
T 2icy_A 134 MNSFNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGK 213 (469)
T ss_dssp EECTTTHHHHHHHHGGGTTSSSCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTC
T ss_pred EeCCCCHHHHHHHHHhcccCCceEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCC
Confidence 89999999999999999999999999999999999999999999887667899999999999999999999999999999
Q ss_pred eEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcceee
Q 019770 81 EYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFN 160 (336)
Q Consensus 81 ~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~fn 160 (336)
+|++|+|+|||++++||.++|||++++++++++|++|+.+++++|++|.++|+++++||+|+|++++++|++..+|.+||
T Consensus 214 e~~~V~n~DnL~~~~d~~ll~~~~~~~a~~t~~v~~k~~~~~~~Gvl~~~dg~~~vvE~~e~p~~~~~e~k~~~~~~~~N 293 (469)
T 2icy_A 214 EYVFVANSDNLGAIVDLTILKHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFN 293 (469)
T ss_dssp CEEEEEETTBTTCCCCHHHHHHHHHHTCSEEEEEEECCTTCCSSCEEEEETTEEEEECGGGSCGGGHHHHHSSSSCCEEE
T ss_pred CEEEEEECCcCCcccCHHHHHHHHHcCCCeeEEEEEeccCCCceeEEEEECCEEEEEEEeccChhhhhhhccccccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999988887888999999
Q ss_pred eeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhcccceEEEEeccceeeccCCCchhHHhhhhh
Q 019770 161 TNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 240 (336)
Q Consensus 161 tnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~~~sd~y 240 (336)
|||+||++++|+++++...+.||+|+|+|++++.+++|||+||||++++|+++.+++|+|+||+||||++|+++++||+|
T Consensus 294 ~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~~~~~~~~~~V~R~~F~PvKn~~dll~~~s~l~ 373 (469)
T 2icy_A 294 TNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKASSDLLLVQSDLY 373 (469)
T ss_dssp EEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGGSTTCEEEECCGGGCCBCCSHHHHHHHHSTTE
T ss_pred EEEEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHHhcCCeEEEEechhHcCcCCCHHHHHHHHHHHH
Confidence 99999999999999988778999999999999889999999999999999999999999999999999999999999999
Q ss_pred ccccCeeEecCCcCCCCCCeEEeCCCcccHHHHhhhcCCCCCccccceEEEecceEEccCeEEEEEEEEEcCCCCeEEcC
Q 019770 241 TLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIP 320 (336)
Q Consensus 241 ~~~~g~~~~~~~r~~~~~P~I~L~~~f~~~~~~~~r~~~~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip 320 (336)
.+++|++++++.|..+..|.|+|+++|+++++|++||+++|||++|+||||+|||+||+||+|+|+|+|.|++|.+++||
T Consensus 374 ~~~~g~~~~~~~~~~~~~P~v~l~~~~~~v~~f~~rf~~~p~~~~~~~l~v~gdv~fg~~v~l~G~v~i~~~~~~~~~ip 453 (469)
T 2icy_A 374 TLVDGFVTRNKARTNPSNPSIELGPEFKKVATFLSRFKSIPSIVELDSLKVSGDVWFGSSIVLKGKVTVAAKSGVKLEIP 453 (469)
T ss_dssp EEETTEEEECTTCCSSSCCEEEECGGGCSHHHHHHTBSSCCBCTTEEEEEEESEEEECSSCEEEEEEEEECCTTCEEEEC
T ss_pred HHhcCcEEecCcccCCCCCeEEcChhhhhHHHHHHhcCCCcccccCCeEEEEeeeEEcCCcEEEEEEEEEcCCCCeeecC
Confidence 99999999999876678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeecceeeCCCCC
Q 019770 321 DGAVLENKEINGPGDL 336 (336)
Q Consensus 321 ~g~~l~n~~~~~~~~~ 336 (336)
+|++|+|++|+||+||
T Consensus 454 ~g~~l~~~~~~~~~~~ 469 (469)
T 2icy_A 454 DRAVVENKNINGPEDL 469 (469)
T ss_dssp TTCEEESCEECCC---
T ss_pred CCCEeecceeeccCCC
Confidence 9999999999999997
No 4
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-84 Score=657.44 Aligned_cols=335 Identities=57% Similarity=0.949 Sum_probs=322.7
Q ss_pred CCCcCchHHHHHHHHHcCCCCceeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHHcCc
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGK 80 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~~G~ 80 (336)
|||+.||++|++||++|++||++|.+|.|+++||++.+|+++++++.++++++|+|+||||+|.+|+.||+|++|.++|+
T Consensus 147 mts~~t~e~t~~~~~~~~~fg~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~ 226 (488)
T 2i5k_A 147 MNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGR 226 (488)
T ss_dssp ECCTTTHHHHHHHHGGGCSSSCEEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTC
T ss_pred EECCCCHHHHHHHHHhccccCceEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCC
Confidence 89999999999999999999999999999999999999999999886666899999999999999999999999999999
Q ss_pred eEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcceee
Q 019770 81 EYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFN 160 (336)
Q Consensus 81 ~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~fn 160 (336)
+|++|+|+|||++++||.+||||+++++++++++++|+.+++++|++++.+|++++|||+|+|+++++++++..++++||
T Consensus 227 ~~v~V~ngDnL~~~~d~~~L~~~~~~~a~~t~~v~~~~~p~~~yG~Iv~~dG~~~iVE~~e~~~e~~~~~~~~~~~~~~N 306 (488)
T 2i5k_A 227 EILFVSNGDNLGATVDLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFN 306 (488)
T ss_dssp CEEEEECTTBSSCCCCHHHHHHHHHSCCSEEEEEEECCGGGSSSCEEEEETTEEEEECGGGSCTTSHHHHTCTTTCCEEE
T ss_pred CEEEEEeCCcCCCcccHHHHHHHHhcCCcEEEEEEEecCCCCceeEEEEECCcEEEEEeccCCHHHHhhcccccccCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888888999999
Q ss_pred eeeEEEEHHHHHHHHHhcCcCcceeecccccC----CCCceehhhhhchHHhhcccceEEEEeccceeeccCCCchhHHh
Q 019770 161 TNNLWVNLKAIKRLVEADALKMEIIPNPKEVD----GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQ 236 (336)
Q Consensus 161 tnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~----~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~~~ 236 (336)
|||+||++++|++++++..+.||+|+|+|+++ +++++||||||||+|++|+++.+++|||+||+||||++|++++|
T Consensus 307 tgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~~~~~~~~V~R~~F~PvKn~~~ll~~~ 386 (488)
T 2i5k_A 307 TNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPRSRFLPVKTCSDLLLVK 386 (488)
T ss_dssp EEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC-----CEECCBCCGGGGGGGSSSCEEEEECGGGCCBCCSHHHHHHHT
T ss_pred EEEEEEeHHHHHHHHhhccCCCcceecCccccCCCCCCceEEeeehhhhHHhhccCceEEEecccccccccCCccHHHHH
Confidence 99999999999999998778999999999997 78999999999999999999999999999999999999999999
Q ss_pred hhhhccccCeeEecCCcCCCCCCeEEeCCCcccHHHHhhhcCCCCCccccceEEEecceEEccCeEEEEEEEEEcCCCCe
Q 019770 237 SDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEK 316 (336)
Q Consensus 237 sd~y~~~~g~~~~~~~r~~~~~P~I~L~~~f~~~~~~~~r~~~~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~~ 316 (336)
||+|.+++|+++.++.+ .+..|.|+|+++|+++++|++||+++|+|+++++|+|+|||+||+||+|+|+|+|+|++|++
T Consensus 387 ~~~~~~~~g~~~~~~~~-~e~~P~v~~~~~~~~~~~~~~rf~~~p~i~~~~~l~v~Gdv~fg~~v~l~G~v~i~a~~~~~ 465 (488)
T 2i5k_A 387 SDLFRLEHGSLKLDPSR-FGPNPLIKLGSHFKKVSGFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHK 465 (488)
T ss_dssp STTEEEETTEEEECTTC-CSSCCEEEECGGGSSHHHHHHHCSSCCBCTTEEEEEEESSEEECTTCEEEEEEEEECCTTCC
T ss_pred HHHHHHhcCcEeecCCc-CCCCCeEEECCcccchhhHHhhcCCCccccccceEEEEeeeEEcCCcEEEEEEEEEcCCCCe
Confidence 99999999999988887 55789999988999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCeeecceeeCCCCC
Q 019770 317 LEIPDGAVLENKEINGPGDL 336 (336)
Q Consensus 317 ~~ip~g~~l~n~~~~~~~~~ 336 (336)
++||+|++|+|++|+||+||
T Consensus 466 ~~ip~g~~l~n~~~~~~~~~ 485 (488)
T 2i5k_A 466 IDIPNGSILENVVVTGNLQI 485 (488)
T ss_dssp EEECTTCEEEEEEEEEEEEE
T ss_pred EEeCCCCEEecceeeccccc
Confidence 99999999999999999986
No 5
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=100.00 E-value=4.5e-85 Score=662.10 Aligned_cols=330 Identities=37% Similarity=0.613 Sum_probs=312.5
Q ss_pred CCCcCchHHHHHHHH-HcCCCCc---eeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHH
Q 019770 1 MNSFNTHDDTSKIIE-KYSKSNV---EIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALI 76 (336)
Q Consensus 1 MtS~~T~~~T~~~le-k~~~fgl---~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~ 76 (336)
|||+.||+.|++||+ +|++||+ +|++|+|+++||++.+|+.++.++.+ +.++|+|+||||+|.+|++||+|++|+
T Consensus 130 MtS~~t~e~t~~~f~~~~~~fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~-~~~e~~P~G~Gg~~~aL~~sGlL~~l~ 208 (505)
T 2oeg_A 130 MDSFNTSASTKSFLKARYPWLYQVFDSEVELMQNQVPKILQDTLEPAAWAEN-PAYEWAPPGHGDIYTALYGSGKLQELV 208 (505)
T ss_dssp EECHHHHHHHHHHHHHHCHHHHTTCCCCCEEECCCEECEETTTCCBCCCTTC-GGGGEECCCTTHHHHHHHHTTHHHHHH
T ss_pred EeCCCCHHHHHHHHhhhhhccCCCccceEEEEEcCEEeEecCCCceeecCCC-CccccCcCCchHHHHHHHhcChHHHHH
Confidence 899999999999999 9999999 59999999999999999777755443 569999999999999999999999999
Q ss_pred HcCceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe-------eCCe-------EEEEEeecC
Q 019770 77 SQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS-------YEGK-------VQLLEIAQV 142 (336)
Q Consensus 77 ~~G~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~-------~~g~-------~~~vEysql 142 (336)
++|++|++|+|+|||++++||.+||||++++++++++|++|+.++++||+++. ++|+ ++++||+|+
T Consensus 209 ~~G~e~i~V~N~DNL~~~~D~~llg~~~~~~ad~~~~v~~k~~~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~ 288 (505)
T 2oeg_A 209 EQGYRYMFVSNGDNLGATIDKRVLAYMEKEKIDFLMEVCRRTESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQC 288 (505)
T ss_dssp HTTCCEEEEECTTCTTCCCCHHHHHHHHHHTCSEEEEEEECCTTCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGS
T ss_pred hcCCCEEEEEECCccccccCHHHHHHHHhcCCcEEEEEEEecCCccceeEEEEecccccccCCccccccCceeEEEeccC
Confidence 99999999999999999999999999999999999999999999999999998 8999 999999999
Q ss_pred ChhhhhhhcccCCcceeeeeeEEEEHHHHHHHHHh--cCcCcceeecccccC-----CCCceehhhhhchHHhhcccceE
Q 019770 143 PDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEA--DALKMEIIPNPKEVD-----GIKVLQLETAAGAAIRFFDHAIG 215 (336)
Q Consensus 143 p~~~~~~~~~~~~~~~fntnni~~~l~~l~~~~~~--~~~~lp~~vn~K~v~-----~~~~~qlE~~~~d~~~~~~~~~~ 215 (336)
|+++++++++..+|++||||||||+|++|+++++. +.+.||+|+|+|+++ +++++||||||||+|++|+++.+
T Consensus 289 p~e~~~~~~g~~~f~~~Ninn~~~~l~~l~~~~~~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~~~~~~ 368 (505)
T 2oeg_A 289 PKADMESFQDINKYSFFNTNNLWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMFESASA 368 (505)
T ss_dssp CGGGHHHHHCTTTTCEEEEEEEEEEHHHHHHHHHHTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSCTTCEE
T ss_pred ChhhhhcccCccccCeeEEEEEEEEHHHHHHHHhhhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhcCcceE
Confidence 99999999999999999999999999999999987 557899999999998 67899999999999999999999
Q ss_pred EEEeccceeeccCCCchhHHhhhhhcccc-CeeEecCCcCCCCCCeEEeCCC-cccHHHHhhhcCC-CCCccccceEEEe
Q 019770 216 CNVHRSRFLPVKATSDLLLVQSDLYTLAD-GFVTRNEARKNPANPTIELGPE-FKKVGNFLSRFKS-IPSIIELDSLKVT 292 (336)
Q Consensus 216 i~V~R~rF~PVKn~~dll~~~sd~y~~~~-g~~~~~~~r~~~~~P~I~L~~~-f~~~~~~~~r~~~-~p~i~~~~~L~V~ 292 (336)
++|||+||+||||++|++++|||+|.+++ |.+..++.|.. ..|.|+|+|. |+++++|++||++ +|+|+++++|+|+
T Consensus 369 ~~V~R~~FsPvKn~~dl~~~~sdly~~~~~~~~~~~~~~~~-~~p~i~l~p~~~~~~~~~~~r~~~g~psi~~~~~L~v~ 447 (505)
T 2oeg_A 369 IVVPRSRFAPVKTCADLLALRSDAYVVTDDFRLVLDDRCHG-HPPVVDLDSAHYKMMNGFEKLVQHGVPSLVECKRVTVK 447 (505)
T ss_dssp EECCGGGCCCCSSHHHHHHHHSTTEEECTTCCEEECGGGTT-CCCEEEECHHHHSSHHHHHHHSTTCCCBCTTEEEEEEE
T ss_pred EEeccceeecccCCCCHHHHHHHHHhhcCCceEEEcccccC-cCCeEEEChhHcCcHHHHHHhcCCCCCccccCcEEEEE
Confidence 99999999999999999999999999998 76666887754 5799999999 7779999999997 9999999999999
Q ss_pred cceEEccCeEEEEEEEEEcC-CCCeEEcCCCCeeecceeeC
Q 019770 293 GDVWFGANITLKGKVTIAAK-SGEKLEIPDGAVLENKEING 332 (336)
Q Consensus 293 Gdv~fg~~v~l~G~v~i~a~-~~~~~~ip~g~~l~n~~~~~ 332 (336)
|||+||+||+|+|+|+|+|+ +|++++||+|++|+|++++.
T Consensus 448 G~~~f~~~v~l~G~v~i~a~~~~~~~~ip~g~~l~n~~~~~ 488 (505)
T 2oeg_A 448 GLVQFGAGNVLTGTVTIENTDSASAFVIPDGAKLNDTTASP 488 (505)
T ss_dssp SSEECCTTCEEEEEEEEECCSCSSCEECCTTCEEESCEECC
T ss_pred cceEEccCcEEEEEEEEEecCCCCcEEeCCCCEEeCceech
Confidence 99999999999999999999 99999999999999998874
No 6
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=100.00 E-value=6.5e-74 Score=587.19 Aligned_cols=320 Identities=20% Similarity=0.207 Sum_probs=276.5
Q ss_pred CCCcCchHHHHHHHHHcCCCCc---eeEEEecCCceeee-cCCCcccCCCCCCCCcccCCCCCccchhhhhhcC------
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNV---EIHTFNQSQYPRLC-ADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSG------ 70 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl---~v~~F~Q~~~P~l~-~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sG------ 70 (336)
|||+.||++|++||++ ||+ +|++|+|+++||++ .+|+++++++ ++++|+|+||||+|.||++||
T Consensus 168 MTS~~T~~~T~~~~~~---fgl~~~~V~~F~Q~~~P~i~~~~g~l~l~~~---~~i~~~P~GhGdv~~aL~~sG~~~~~~ 241 (630)
T 3ogz_A 168 MTSDDTHDRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLALDET---GKLLRKPHGHGDVHSLIYNATVKRDVV 241 (630)
T ss_dssp EECTTTHHHHHHHHHH---TTCCCTTEEEEECCCEECBSSTTCCBCBCTT---SSBCEECCCTTHHHHHHHHCBC-----
T ss_pred EecccchHHHHHHHHH---hCCCcccEEEEEcCCEEEEecCCCceeecCC---CcccCCCCCCHHHHHHHHHcCCCcccc
Confidence 9999999999999999 677 49999999999996 5689999876 699999999999999999999
Q ss_pred ------------hHHHHHHcCceEEEEEeCcc-ccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEee---CCeE
Q 019770 71 ------------KLDALISQGKEYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISY---EGKV 134 (336)
Q Consensus 71 ------------lld~l~~~G~~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~---~g~~ 134 (336)
+|++|+++|+||+||+|+|| |++++||.||||+++++++|++|||+|++ .|++|++|+. +|++
T Consensus 242 ~~~~~~~~~~~~lLd~l~~~Gieyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p-~E~vG~l~~~~~~dGk~ 320 (630)
T 3ogz_A 242 PDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPISLALSAEHSLDMNFTCIPRVP-KEPIGLLCRTKKNSGDP 320 (630)
T ss_dssp ---------CCBHHHHHHHTTCCEEEEECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCCS-SCSSCEEEEEESSTTSC
T ss_pred cccccccccHHHHHHHHHHcCCEEEEEEccCCccccccCHHHhHHHHhcCCCEEEEEEECCC-CcceeeEEEEecCCCce
Confidence 99999999999999999999 99999999999999999999999999975 5667778874 9998
Q ss_pred ---EEEEeecCChhhhh-------hhcccCCccee--eeeeEEEEHHHHHHHHHhcCcCcceeecccccCC-----CCce
Q 019770 135 ---QLLEIAQVPDEHVN-------EFKSIEKFKIF--NTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDG-----IKVL 197 (336)
Q Consensus 135 ---~~vEysqlp~~~~~-------~~~~~~~~~~f--ntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~-----~~~~ 197 (336)
++|||+|+|++.++ .+.+.++|+|| |||||||+|+++++.+......+|+|+|+|++++ ++++
T Consensus 321 ~~v~vVEYsei~~~~~~~~~~~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~~~~~ip~~vNpK~~d~~~~~~~~~~ 400 (630)
T 3ogz_A 321 WLVANVEYNVFAEVSRALNKDGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRESHGIVPEFINPKYSDETRRSFKKPA 400 (630)
T ss_dssp CEEEEECHHHHHHHHHHC------------CCCSSCEEEEEEEEEHHHHHHHHHHHTTCCCCEECCCBSSSSSCCBSSCB
T ss_pred eeeeEEEeccCCHhHhhccCCCccccccccccccccccceeeeEEHHHHHHHHHhccCccceecCCcccCCcccccCcch
Confidence 67999999988765 36667779999 9999999999988888764568999999999983 4699
Q ss_pred ehhhhhchHHhhcc-cc---eEEEEeccceeeccCCCc--------------hhHHhhhhhccccCeeEec---------
Q 019770 198 QLETAAGAAIRFFD-HA---IGCNVHRSRFLPVKATSD--------------LLLVQSDLYTLADGFVTRN--------- 250 (336)
Q Consensus 198 qlE~~~~d~~~~~~-~~---~~i~V~R~rF~PVKn~~d--------------ll~~~sd~y~~~~g~~~~~--------- 250 (336)
||||||||++++|+ ++ .+++|||+||+||||+++ ..++++|+|.++..|+..+
T Consensus 401 qLEt~m~d~~~~F~~~~~~v~~~~V~R~~F~PVKn~~~~a~~k~~~g~~~~sp~t~~~dly~~~~~~L~~aG~~v~~~~~ 480 (630)
T 3ogz_A 401 RIESLMQDIALLFSEDDYRVGGTVFERFSYQPVKNSLEEAAGLVAQGNGAYCAATGEAAFYELQRRRLKAIGLPLFYSSQ 480 (630)
T ss_dssp CEECCGGGGGGGCCTTTCCEEEEECCGGGCCBCCBCHHHHHHHHHTTCCCCBHHHHHHHHHHHHHHHHHHTTCCCCCCCS
T ss_pred hhhhHHHHHHHhccccCcceeEEEECCCeeecccCChhHhhhhhccCCCcCChHHHHHHHHHHHHHHHHHcCceeccccc
Confidence 99999999999997 44 789999999999999984 3568999999986433221
Q ss_pred -------CCcCCCCCCeEEeCCCccc---HHHHhhhcCC--CCCccccceEEEecceEEccCeEEEEEEEEEcCCCCe--
Q 019770 251 -------EARKNPANPTIELGPEFKK---VGNFLSRFKS--IPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEK-- 316 (336)
Q Consensus 251 -------~~r~~~~~P~I~L~~~f~~---~~~~~~r~~~--~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~~-- 316 (336)
+.+....+|+|.|+|.|+. .+++++||++ .++|+++++|.|+|+ ++.++|.|+|+|+|.|++|++
T Consensus 481 ~~~~~~~~~~~~~~~P~i~l~p~~~~~~~~~~~~~k~~~~~~~~i~~~S~L~veg~-v~~~~l~LdG~lvI~a~~~~~~~ 559 (630)
T 3ogz_A 481 PEVTVAKDAFGVRLFPIIVLDTVCASSGSLDDLARVFPTPEKVHIDQHSTLIVEGR-VIIESLELYGALTIRGPTDSMAL 559 (630)
T ss_dssp CSEEETTTTEEECCCSEEEECHHHHTTCCHHHHHHHCSSGGGEEECTTCEEEEESS-EEESCEEEESEEEEECCSSTTSC
T ss_pred chhhhhcCccccCCCCEEEEeccccccccHHHHHHHhCCCCCceecCCcEEEEEEE-EEEEEEEEeeEEEEEcCCCCccC
Confidence 1111235799999999865 6999999998 889999999999999 666999999999999999999
Q ss_pred --EEcCCCCeeeccee
Q 019770 317 --LEIPDGAVLENKEI 330 (336)
Q Consensus 317 --~~ip~g~~l~n~~~ 330 (336)
+++ ++ +|+|++-
T Consensus 560 ~~v~~-~~-~v~n~g~ 573 (630)
T 3ogz_A 560 PHVVR-NA-VVRNAGW 573 (630)
T ss_dssp CEEEC-SE-EEECCCC
T ss_pred ceEEe-cc-eEecCCc
Confidence 888 56 9999764
No 7
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=100.00 E-value=3.9e-67 Score=517.54 Aligned_cols=261 Identities=20% Similarity=0.264 Sum_probs=239.7
Q ss_pred CCCcCchHHHHHHHHHcCCCCc---eeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNV---EIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALIS 77 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl---~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~ 77 (336)
|||+.||++|++||++|+|||+ +|++|+|+++||++.+|+++++++ ++++|+|+||||+|.||++||+||+|++
T Consensus 99 MtS~~t~e~t~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~---~~i~~~P~GhGgi~~aL~~sG~Ld~l~~ 175 (405)
T 3oc9_A 99 MTNEETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKK---DKPYMAPNGHGGLFKALKDNGILEFMNE 175 (405)
T ss_dssp EECTTTHHHHHHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEET---TEECEEECCGGGHHHHHHHTTHHHHHHH
T ss_pred EeCCccHHHHHHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCC---CccccccCCChHHHHHHHHCCcHHHHHh
Confidence 9999999999999999999999 499999999999999999999876 8999999999999999999999999999
Q ss_pred cCceEEEEEeCcc-ccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCc
Q 019770 78 QGKEYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKF 156 (336)
Q Consensus 78 ~G~~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~ 156 (336)
+|+||++|+|+|| |++++||.|||||++++++++||||+|+.+++++|++|+++|+++|+||+|+|++ .++++.+++
T Consensus 176 ~Gieyi~v~nvDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~dek~Gvl~~~dg~~~vvEysei~~e--~e~~~~~g~ 253 (405)
T 3oc9_A 176 KGIKYSVAHNVDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKEQERIKVVEYTELTDE--LNKQLSNGE 253 (405)
T ss_dssp HTCCEEEEECTTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEETTEEEEECGGGCCTT--TTCBCTTSC
T ss_pred cCCEEEEEEeCCCcccccCCHHHHHHHHHcCCCEEEEEEECCCCCCccceEEEECCeeEEEEEeeCCHH--HhhcCCCCc
Confidence 9999999999999 9999999999999999999999999999999999999999999999999999999 667788899
Q ss_pred ceeeeeeEE---EEHHHHHHHHHhcCcCcceeecccccC------------CCCceehhhhhchHHhhcccceEEEEecc
Q 019770 157 KIFNTNNLW---VNLKAIKRLVEADALKMEIIPNPKEVD------------GIKVLQLETAAGAAIRFFDHAIGCNVHRS 221 (336)
Q Consensus 157 ~~fntnni~---~~l~~l~~~~~~~~~~lp~~vn~K~v~------------~~~~~qlE~~~~d~~~~~~~~~~i~V~R~ 221 (336)
.+||+|||| |++++|++++ ...||+|+|.|+++ ++|++|||+||||+|++++++.+++|+|+
T Consensus 254 l~fn~~Ni~~h~fs~~fL~~i~---~~~l~~h~a~Kkip~~d~~g~~~~p~~~ngiklE~fifd~f~~~~~~~~~eV~R~ 330 (405)
T 3oc9_A 254 FIYNCGHISINGYSTSFLEKAA---EYQLPYHIAKKKVPFVNEQGIVIHPSENNGIKKEIFFFDVFPLATKVSIFEIQRF 330 (405)
T ss_dssp BSSCEEEEEEEEEEHHHHHHHT---TCCCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSCEEEEECCHH
T ss_pred eeeccceeEeeecCHHHHHHhh---hccCCcEEeccccCccCCCCCCcccCCcceeehHHHHHHHHHhccceEEEEEChH
Confidence 999999988 5999999998 24799999999995 36899999999999999999999999999
Q ss_pred -ceeeccCC-----CchhHHhhhhhccccCeeEecCCcCCCC-CCeEEeCCCccc
Q 019770 222 -RFLPVKAT-----SDLLLVQSDLYTLADGFVTRNEARKNPA-NPTIELGPEFKK 269 (336)
Q Consensus 222 -rF~PVKn~-----~dll~~~sd~y~~~~g~~~~~~~r~~~~-~P~I~L~~~f~~ 269 (336)
||+||||+ ++..++|+|+|.++..|+..++....+. ...|+++|..+-
T Consensus 331 ~eF~PlKn~~g~~~dsp~tar~~l~~~~~~wl~~ag~~~~~~~~~~~Eispl~sy 385 (405)
T 3oc9_A 331 IEFSALKNSLNESFDNVNTVKRDWYRLNIYYLKKAGAIVDDSKSPICEISFRKSF 385 (405)
T ss_dssp HHCCBCCCCTTSSSSSHHHHHHHHHHHHHHHHHHTTCEEECSSCCCEEECTTTCS
T ss_pred hcccceecCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEcCCCCccEEeCccccc
Confidence 79999998 3467999999999998887776543222 236888887554
No 8
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=100.00 E-value=1.7e-60 Score=481.79 Aligned_cols=250 Identities=19% Similarity=0.209 Sum_probs=227.3
Q ss_pred CCCcCchHHHHHHHHHcCCCCc---eeEEEecCCceeeecCC-CcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNV---EIHTFNQSQYPRLCADD-FVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALI 76 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl---~v~~F~Q~~~P~l~~~~-~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~ 76 (336)
|||+.||+.|++||++|+|||+ +|++|+|+++||++.+| +++++++ +.++|+|+||||+|.+|++||+|++|+
T Consensus 168 mtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~---~~i~~~P~G~Ggi~~aL~~sG~Ld~l~ 244 (486)
T 2yqc_A 168 MTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELK---NSICQSPDGNGGLYKALKDNGILDDLN 244 (486)
T ss_dssp EECGGGHHHHHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEET---TEECEEECCGGGHHHHHHHTTHHHHHH
T ss_pred EECCCCHHHHHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCC---CccccCcCCchHHHHHHHHcCcHHHHH
Confidence 9999999999999999999999 49999999999999999 9999876 789999999999999999999999999
Q ss_pred HcCceEEEEEeCcc-ccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEee--CCeEEEEEeecCChhhhhhhcc-
Q 019770 77 SQGKEYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISY--EGKVQLLEIAQVPDEHVNEFKS- 152 (336)
Q Consensus 77 ~~G~~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~--~g~~~~vEysqlp~~~~~~~~~- 152 (336)
++|++|++|+|+|| |+.++||.+||||++++++++++|++|+.+++++|++|++ +|+++++||+|+|+++++.+..
T Consensus 245 ~~G~~yi~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~~~~ 324 (486)
T 2yqc_A 245 SKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELANKKDPQ 324 (486)
T ss_dssp HHTCCEEEEEETTBTTCCTTCHHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTTTEEEEECGGGSCHHHHHCEETT
T ss_pred hcCCeEEEEECCCCceeeccCHHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecCCCEEEEEEecCCHHHhhccccc
Confidence 99999999999999 7779999999999999999999999999999999999998 9999999999999998876532
Q ss_pred ---cCCcceeeeeeEEEEHHHHHHHHHhcCcC---cceeecccccC-------------CCCceehhhhhchHHhhcc--
Q 019770 153 ---IEKFKIFNTNNLWVNLKAIKRLVEADALK---MEIIPNPKEVD-------------GIKVLQLETAAGAAIRFFD-- 211 (336)
Q Consensus 153 ---~~~~~~fntnni~~~l~~l~~~~~~~~~~---lp~~vn~K~v~-------------~~~~~qlE~~~~d~~~~~~-- 211 (336)
.-.|.++||||+||++++|++++...... ||+|+|+|+++ ++|++||||||||+|++++
T Consensus 325 ~~~~~~~~~~Ni~~~~~~l~~L~~~l~~~~~~~~~lp~~v~~Kki~~~d~~~g~~~~p~~pn~~klE~~~~d~~~~~~l~ 404 (486)
T 2yqc_A 325 DSSKLFLRAANIVNHYYSVEFLNKMIPKWISSQKYLPFHIAKKKIPSLNLENGEFYKPTEPNGIKLEQFIFDVFPSVELN 404 (486)
T ss_dssp EEEEESSCEEEEEEEEEEHHHHHHHHHHHTTCTTTSCCEEEEECCCEECTTTCCEECCSSCCEEEEECCGGGGGGGSCGG
T ss_pred ccccccccceeEEEEEEeHHHHHHHHHhhcCcccCCcceEeccccCccccccCeeccCCCCCeeeeeehHhhHHhhcccC
Confidence 22577889999999999999967654446 99999999763 3579999999999999999
Q ss_pred cceEEEEecc-ceeeccCCC----c-hhHHhhhhhccccCeeEecCCc
Q 019770 212 HAIGCNVHRS-RFLPVKATS----D-LLLVQSDLYTLADGFVTRNEAR 253 (336)
Q Consensus 212 ~~~~i~V~R~-rF~PVKn~~----d-ll~~~sd~y~~~~g~~~~~~~r 253 (336)
++.+++|+|+ ||+||||+. | ..+++.|+|.++..|+..++..
T Consensus 405 ~~~~~~V~R~~~FsPvKn~~~~~~dsp~ta~~~l~~~~~~~l~~aG~~ 452 (486)
T 2yqc_A 405 KFGCLEVDRLDEFSPLKNADGAKNDTPTTCRNHYLERSSKWVIQNGGV 452 (486)
T ss_dssp GEEEEEECHHHHCCBCCSCTTSSSSSHHHHHHHHHHHHHHHHHHTTCE
T ss_pred ceEEEEECcccceeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCe
Confidence 9999999995 799999975 3 4689999999998887766654
No 9
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=100.00 E-value=2.7e-57 Score=460.12 Aligned_cols=249 Identities=18% Similarity=0.225 Sum_probs=228.4
Q ss_pred CCCcCchHHHHHHHHHcCCCCc---eeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHH
Q 019770 1 MNSFNTHDDTSKIIEKYSKSNV---EIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALIS 77 (336)
Q Consensus 1 MtS~~T~~~T~~~lek~~~fgl---~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~ 77 (336)
|||+.||+.|++||++|++||+ +|++|+|+++||++.+|+++++++ +.++|+|+||||+|++|+.||+|++|++
T Consensus 165 mtS~~t~e~t~~~f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~---~~~e~~P~GtGG~~~~L~~sg~L~~l~~ 241 (505)
T 1jv1_A 165 MTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEK---NKVSMAPDGNGGLYRALAAQNIVEDMEQ 241 (505)
T ss_dssp EECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEET---TEECEEECCGGGHHHHHHHTTHHHHHHH
T ss_pred EecCCCHHHHHHHHHhhhhcCCCcCceEEEEecceEEEcCCCcccccCC---cccccCCCCchHHHHHHHHcCcHHHHHh
Confidence 8999999999999999999999 499999999999999999999876 7899999999999999999999999999
Q ss_pred cCceEEEEEeCcc-ccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhccc--C
Q 019770 78 QGKEYVFAANSDN-LGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSI--E 154 (336)
Q Consensus 78 ~G~~yi~v~nvDN-L~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~--~ 154 (336)
+|++|++|+|+|| |++++||.++|||+.++++++++|++|+.+++++|++|+++|+++++||+|+|++.++.++.. .
T Consensus 242 ~g~e~~~V~n~Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~~e~~Gvl~~~dg~~~vvEy~E~p~~~~~~~~~~g~~ 321 (505)
T 1jv1_A 242 RGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRL 321 (505)
T ss_dssp TTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEETTEEEEECGGGSCHHHHHCBCTTSSB
T ss_pred cCCCEEEEEECCccccccchHHHHHHHHHcCCCEEEEEEEccCCccCcceEEEECCeEEEEEEeeCCHHHhhhccccccc
Confidence 9999999999999 799999999999999999999999999999999999999999999999999999988776533 3
Q ss_pred CcceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccC------------CCCceehhhhhchHHhhcccceEEEEecc-
Q 019770 155 KFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD------------GIKVLQLETAAGAAIRFFDHAIGCNVHRS- 221 (336)
Q Consensus 155 ~~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~------------~~~~~qlE~~~~d~~~~~~~~~~i~V~R~- 221 (336)
.|.++||||+||++++|+++.+.....||+|+|+|+++ ++|++||||||||+|++|+++.+++|+|+
T Consensus 322 ~~~~~N~~~~~f~l~~L~~i~~~~~~~l~~hv~~Kkip~~d~~g~~v~P~~pn~~klE~~i~d~~~~~~~~~~~~V~R~~ 401 (505)
T 1jv1_A 322 LFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFVVYEVLRED 401 (505)
T ss_dssp SSCEEEEEEEEEEHHHHHHHHHTTGGGCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSSEEEEEECHHH
T ss_pred ccceeeEEEEEecHHHHHHHHHhhcccCCceecccccccccCCCCCcCCCCCCceeHHHHHHHHHhhcCceEEEEECccc
Confidence 57789999999999999999987556899999999874 36889999999999999999999999999
Q ss_pred ceeeccCCCc------hhHHhhhhhccccCeeEecCC
Q 019770 222 RFLPVKATSD------LLLVQSDLYTLADGFVTRNEA 252 (336)
Q Consensus 222 rF~PVKn~~d------ll~~~sd~y~~~~g~~~~~~~ 252 (336)
||+||||+++ ..++++|+|.++..|+..++.
T Consensus 402 ~FsPvKn~~~~~~~dsp~ta~~~l~~~~~~~l~~ag~ 438 (505)
T 1jv1_A 402 EFSPLKNADSQNGKDNPTTARHALMSLHHCWVLNAGG 438 (505)
T ss_dssp HCCBCCSCTTSSSSSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred ceeeccCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Confidence 5999999653 468999999998766654443
No 10
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=92.76 E-value=2.8 Score=41.36 Aligned_cols=110 Identities=12% Similarity=0.047 Sum_probs=73.7
Q ss_pred ceEEEEEeCcc-cccccc-HHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeE-EEEEeecCChhhhhhhcccCCc
Q 019770 80 KEYVFAANSDN-LGAIVD-LKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKV-QLLEIAQVPDEHVNEFKSIEKF 156 (336)
Q Consensus 80 ~~yi~v~nvDN-L~~~~D-p~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~-~~vEysqlp~~~~~~~~~~~~~ 156 (336)
..++++.+.|. |...-+ -.++.++..++.++.+-+++-..|..-|-++...+|++ .++|--+.++++.. -
T Consensus 111 ~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp~~yG~i~~~~~g~v~~ivEk~~~~~~~~~-------i 183 (501)
T 3st8_A 111 AGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILRTQDHEVMAIVEQTDATPSQRE-------I 183 (501)
T ss_dssp CSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEECTTCCEEEEECGGGCCHHHHH-------C
T ss_pred ccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccCCchhccccccccceeEEeeccccCCChhhcc-------c
Confidence 45677777777 654433 45678888889999888887777655454444467765 58998888777643 2
Q ss_pred ceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc
Q 019770 157 KIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF 210 (336)
Q Consensus 157 ~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~ 210 (336)
...|+...+|+-+.|++++..- ..+-.|-|....|++.++
T Consensus 184 ~~in~Giy~f~~~~l~~~l~~l--------------~~~n~~~e~yltd~i~~~ 223 (501)
T 3st8_A 184 REVNAGVYAFDIAALRSALSRL--------------SSNNAQQELYLTDVIAIL 223 (501)
T ss_dssp CEEEEEEEEEEHHHHHHHHTTC--------------CCCSTTCSCCTTHHHHHH
T ss_pred eeeeceeeeecchhHHHhhhhh--------------cccccccccchhhHHHHH
Confidence 3468888889999999887531 122334466666766665
No 11
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=87.03 E-value=11 Score=36.01 Aligned_cols=151 Identities=12% Similarity=0.150 Sum_probs=77.2
Q ss_pred HHHHHHcCceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecc-cCCcceeEEEee-CCeEEEEEeecCChhhhhh
Q 019770 72 LDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKT-LADVKGGTLISY-EGKVQLLEIAQVPDEHVNE 149 (336)
Q Consensus 72 ld~l~~~G~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~-~~dekgG~l~~~-~g~~~~vEysqlp~~~~~~ 149 (336)
++.+.+.+-+++++.+.|.+...---.++..+.++++++++-+.+.. .....-|.+... +|++ +++.+-|......
T Consensus 118 ~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~~g~v--~~~~ekp~~~~~~ 195 (420)
T 3brk_X 118 IDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRMEATGFGVMHVNEKDEI--IDFIEKPADPPGI 195 (420)
T ss_dssp HHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETTGGGGSEEEEECTTSBE--EEEEESCSSCCCB
T ss_pred HHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCccccCcccEEEECCCCcE--EEeEeCCCccccc
Confidence 34444445689999999995332224577778788888766555431 122345666543 4553 3444433211110
Q ss_pred hcccCCcceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc---ccceEEEEe-------
Q 019770 150 FKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF---DHAIGCNVH------- 219 (336)
Q Consensus 150 ~~~~~~~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~---~~~~~i~V~------- 219 (336)
.......+.|+...+|+-+.+.+.++... . . . -+-|.+..|+++.+ .+..++.++
T Consensus 196 -~~~~~~~~~~~Giy~~~~~~l~~~l~~~~-~-----~------~--~~~~~~~~d~l~~li~~g~v~~~~~~~~~~~~~ 260 (420)
T 3brk_X 196 -PGNEGFALASMGIYVFHTKFLMEAVRRDA-A-----D------P--TSSRDFGKDIIPYIVEHGKAVAHRFADSCVRSD 260 (420)
T ss_dssp -TTBTTEEEEEEEEEEEEHHHHHHHHTSSC-C-----C------------------CTTHHHHHSCEEEEEHHHHBCCCT
T ss_pred -cccccceEEeeeeEEEeHHHHHHHHHHhc-c-----c------C--CccccchHHHHHHHhhhCcEEEEEecccccccc
Confidence 11112335688877889888877664311 0 0 0 00111112333221 134455553
Q ss_pred ---ccceeeccCCCchhHHhhhh
Q 019770 220 ---RSRFLPVKATSDLLLVQSDL 239 (336)
Q Consensus 220 ---R~rF~PVKn~~dll~~~sd~ 239 (336)
...+.-+.+.+|+..++.++
T Consensus 261 ~~~~~~~~dI~t~~d~~~a~~~l 283 (420)
T 3brk_X 261 FEHEPYWRDVGTIDAYWQANIDL 283 (420)
T ss_dssp TCSSCCEECCCSHHHHHHHHHHT
T ss_pred ccCCCEEEECCCHHHHHHHHHHH
Confidence 34588888888887766664
No 12
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=85.95 E-value=25 Score=33.67 Aligned_cols=152 Identities=10% Similarity=0.009 Sum_probs=79.0
Q ss_pred HHHHHcCceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeeccc-CCcceeEEEee-CCeEEEEEeecCChhh-hhh
Q 019770 73 DALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTL-ADVKGGTLISY-EGKVQLLEIAQVPDEH-VNE 149 (336)
Q Consensus 73 d~l~~~G~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~-~dekgG~l~~~-~g~~~~vEysqlp~~~-~~~ 149 (336)
+.+.+.+-+++++.+.|.+...---.++.++.++++++++-+.+... ....-|++... +|+ ++++.+-|+.. ...
T Consensus 129 ~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~~~~--v~~~~ekp~~~~~~~ 206 (451)
T 1yp2_A 129 WLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGR--IIEFAEKPQGEQLQA 206 (451)
T ss_dssp HHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHHHHTTSEEEEECTTSB--EEEEEESCCHHHHHH
T ss_pred HHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChhhcccCCEEEECCCCC--EEEEEECCCchhhcc
Confidence 33333356899999999954322246778888888887665444321 12345665543 344 55555555432 111
Q ss_pred hcc------------cCCcceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhcccceEEE
Q 019770 150 FKS------------IEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCN 217 (336)
Q Consensus 150 ~~~------------~~~~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~~~~~~i~ 217 (336)
++- .....+.|+...+|+-+.+.+.++.. .+. ... ..|-++..++.--.+..++.
T Consensus 207 ~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~---~~~---------~~~-~~~~~l~~~i~~g~~v~~~~ 273 (451)
T 1yp2_A 207 MKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDK---FPG---------AND-FGSEVIPGATSLGMRVQAYL 273 (451)
T ss_dssp TCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTT---CTT---------CCC-TTTTHHHHHHHTTCCEEEEE
T ss_pred ccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhh---ccc---------ccc-hHhhHHHHHHhcCCceEEEE
Confidence 100 00123568887788988887776531 010 000 01111222221101233333
Q ss_pred EeccceeeccCCCchhHHhhhhh
Q 019770 218 VHRSRFLPVKATSDLLLVQSDLY 240 (336)
Q Consensus 218 V~R~rF~PVKn~~dll~~~sd~y 240 (336)
+ ...+.-+-+.+|+..++.++.
T Consensus 274 ~-~~~w~digt~~~l~~a~~~l~ 295 (451)
T 1yp2_A 274 Y-DGYWEDIGTIEAFYNANLGIT 295 (451)
T ss_dssp C-CSCCEECSSHHHHHHHHHGGG
T ss_pred e-CCEEEECCCHHHHHHHHHHHh
Confidence 3 225888988889887777764
No 13
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=68.39 E-value=83 Score=29.92 Aligned_cols=90 Identities=13% Similarity=0.125 Sum_probs=53.2
Q ss_pred ceEEEEEeCcc-cccccc-HHHHHHHHhcCCceeEEeeecccCCcceeEEEee-CCeEEEEEeecCChhhhhhhcccCCc
Q 019770 80 KEYVFAANSDN-LGAIVD-LKILNHLIQNKNEYCMEVTPKTLADVKGGTLISY-EGKVQLLEIAQVPDEHVNEFKSIEKF 156 (336)
Q Consensus 80 ~~yi~v~nvDN-L~~~~D-p~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~-~g~~~~vEysqlp~~~~~~~~~~~~~ 156 (336)
-+++++.+.|. |....+ -.++..+.++++++++-+.+...+ ..-|.+... +|+ +.++.+-|+..-. ....
T Consensus 102 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~~~-~~~g~v~~d~~g~--v~~~~ek~~~~~~----~~~~ 174 (468)
T 1hm9_A 102 SGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNP-FGYGRIVRNDNAE--VLRIVEQKDATDF----EKQI 174 (468)
T ss_dssp CSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCC-TTSCEEEECTTCC--EEEEECTTTCCTT----GGGC
T ss_pred CCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccCCC-CceeEEEECCCCC--EEEEEECCCCChH----HhcC
Confidence 57999999999 554433 345666667788887766665554 334555433 454 4444443321000 0112
Q ss_pred ceeeeeeEEEEHHHHHHHHH
Q 019770 157 KIFNTNNLWVNLKAIKRLVE 176 (336)
Q Consensus 157 ~~fntnni~~~l~~l~~~~~ 176 (336)
.+.|+...+|+-+.|.+.++
T Consensus 175 ~~~~~Giy~f~~~~l~~~l~ 194 (468)
T 1hm9_A 175 KEINTGTYVFDNERLFEALK 194 (468)
T ss_dssp CEEEEEEEEEEHHHHHHHHT
T ss_pred eEEEEEEEEEEHHHHHHHHH
Confidence 34678777889888877664
No 14
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=66.31 E-value=89 Score=29.51 Aligned_cols=132 Identities=17% Similarity=0.133 Sum_probs=70.8
Q ss_pred ceEEEEEeCcc-ccccccHHHHHHHHh--cCCceeEEeeecccCCcceeEEEeeCCeEE-EEEeecCChhhhhhhcccCC
Q 019770 80 KEYVFAANSDN-LGAIVDLKILNHLIQ--NKNEYCMEVTPKTLADVKGGTLISYEGKVQ-LLEIAQVPDEHVNEFKSIEK 155 (336)
Q Consensus 80 ~~yi~v~nvDN-L~~~~Dp~~lg~~~~--~~~~~~~evv~k~~~dekgG~l~~~~g~~~-~vEysqlp~~~~~~~~~~~~ 155 (336)
-+++++.+.|. +.... .+.-+++ .+.+.+.-+++...+ ..-|.+...+|++. ++|-....++. ..
T Consensus 99 ~~~~lv~~~D~P~i~~~---~i~~l~~~~~~~~~~~~~~~~~~~-~~~g~v~~~~g~v~~~~ek~~~~~~~-------~~ 167 (459)
T 4fce_A 99 DEDILMLYGDVPLISVD---TLQRLLAAKPEGGIGLLTVKLDNP-SGYGRIVRENGDVVGIVEHKDASDAQ-------RE 167 (459)
T ss_dssp TSEEEEEETTCTTCCHH---HHHHHHHHCCTTSEEEEEEECSCC-TTSCEEEEETTEEEEEECGGGCCTTG-------GG
T ss_pred CCcEEEEeCCcccCCHH---HHHHHHHHHhhCCEEEEEEecCCC-CcccEEEeCCCcEEEEEECCCCChHH-------hh
Confidence 57999999999 54433 3333332 235566666665554 34566665677543 33322211111 12
Q ss_pred cceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc----ccceEEEEec-cceeeccCCC
Q 019770 156 FKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF----DHAIGCNVHR-SRFLPVKATS 230 (336)
Q Consensus 156 ~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~----~~~~~i~V~R-~rF~PVKn~~ 230 (336)
..+.|+.-.+|+-+.+.+.++.-. .. .... |..+.|.++.+ .+..++.++. +++.=+.+.+
T Consensus 168 ~~~~~~Giy~~~~~~l~~~l~~~~----~~------~~~~----~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~ 233 (459)
T 4fce_A 168 INEINTGILVANGRDLKRWLSLLD----NN------NAQG----EFYITDIIALAHADGKKIATVHPTRLSEVEGVNNRL 233 (459)
T ss_dssp CCEEEEEEEEEEHHHHHHHHHTCC----CC------STTC----SCCTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHH
T ss_pred ccEEEEEEEEEEHHHHHHHHHHhC----cc------ccCC----cEEHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHH
Confidence 235688877789888887765310 00 0011 22344555544 2344555553 4566777888
Q ss_pred chhHHh
Q 019770 231 DLLLVQ 236 (336)
Q Consensus 231 dll~~~ 236 (336)
|+..++
T Consensus 234 Dl~~ae 239 (459)
T 4fce_A 234 QLSALE 239 (459)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876554
No 15
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=53.53 E-value=35 Score=30.11 Aligned_cols=113 Identities=10% Similarity=0.048 Sum_probs=64.7
Q ss_pred CCCCCccchhhhhhcChHHHHHHcCceEEEEEeCcc-cccccc-HHHHHHHHhcCCceeEEeeecccCCcc----eeEEE
Q 019770 55 YPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDN-LGAIVD-LKILNHLIQNKNEYCMEVTPKTLADVK----GGTLI 128 (336)
Q Consensus 55 ~P~GhGdi~~aL~~sGlld~l~~~G~~yi~v~nvDN-L~~~~D-p~~lg~~~~~~~~~~~evv~k~~~dek----gG~l~ 128 (336)
.|.|-|.++.++. .+...+-+++++.+.|+ |...-+ -.++..+.++++++++-+++-..+.+- .|.++
T Consensus 72 ~~~Gt~~~~~~~~------~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv 145 (252)
T 3oam_A 72 HQSGTERLAEVVA------KMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVI 145 (252)
T ss_dssp CCSHHHHHHHHHH------HTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEE
T ss_pred CCCcHHHHHHHHH------hcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEE
Confidence 4566666555442 22112568999999999 654433 345666666788888777765544322 24444
Q ss_pred e-eCCeEEEEEeec--CChhhhhhhccc----CCcceeeeeeEEEEHHHHHHHHH
Q 019770 129 S-YEGKVQLLEIAQ--VPDEHVNEFKSI----EKFKIFNTNNLWVNLKAIKRLVE 176 (336)
Q Consensus 129 ~-~~g~~~~vEysq--lp~~~~~~~~~~----~~~~~fntnni~~~l~~l~~~~~ 176 (336)
. .+|+ ++.+++ +|.+ .+.+... ..-.+-|+....|+-++|++...
T Consensus 146 ~d~~g~--v~~fsr~~i~~~-~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~ 197 (252)
T 3oam_A 146 TDKSGY--ALYFSRATIPWD-RDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLD 197 (252)
T ss_dssp ECTTSB--EEEEESSCSSCC-HHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHH
T ss_pred ECCCCe--EEEEeCCCCCCC-CCccccccccccccceEEEEEEEcCHHHHHHHHc
Confidence 4 5665 455555 4422 1111110 11223488878889999988764
No 16
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=52.59 E-value=1.5e+02 Score=27.80 Aligned_cols=136 Identities=14% Similarity=0.114 Sum_probs=69.8
Q ss_pred ceEEEEEeCcc-ccccccH-HHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEE-EEEeecCChhhhhhhcccCCc
Q 019770 80 KEYVFAANSDN-LGAIVDL-KILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQ-LLEIAQVPDEHVNEFKSIEKF 156 (336)
Q Consensus 80 ~~yi~v~nvDN-L~~~~Dp-~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~-~vEysqlp~~~~~~~~~~~~~ 156 (336)
-+++++.+.|. |....+. .++..+.+ .+.++-+++...+ ..-|.+...+|++. ++|.....++.. ..
T Consensus 96 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~-~~~g~v~~~~g~v~~~~ek~~~~~~~~-------~~ 165 (456)
T 2v0h_A 96 NENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLDNP-TGYGRIIRENGNVVAIVEQKDANAEQL-------NI 165 (456)
T ss_dssp TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSSC-TTSCEEEEETTEEEEEECTTTCCHHHH-------TC
T ss_pred CCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecCCC-CccceEEEcCCcEEEEEECCCCChhHh-------cC
Confidence 57999999999 6544332 23333322 4555555554444 22344444466532 344322222111 12
Q ss_pred ceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhc----ccceEEEEe-ccceeeccCCCc
Q 019770 157 KIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFF----DHAIGCNVH-RSRFLPVKATSD 231 (336)
Q Consensus 157 ~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~----~~~~~i~V~-R~rF~PVKn~~d 231 (336)
.+.|+.-.+|+-+.|.+.++.-. . . .....+.+ .|+++.+ .+..+++++ .+.|.-+-+.+|
T Consensus 166 ~~~~~Giy~~~~~~l~~~l~~~~----~-----~-~~~~~~~~----~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpeD 231 (456)
T 2v0h_A 166 KEVNTGVMVSDGASFKKWLARVG----N-----N-NAQGEYYL----TDLIALANQDNCQVVAVQATDVMEVEGANNRLQ 231 (456)
T ss_dssp CEEEEEEEEEEHHHHHHHHTTCC----C-----C-STTCCCCG----GGHHHHHHHTTCCEEEEECSCTGGGCCCSSHHH
T ss_pred cEEEEEEEEEEHHHHHHHHHHhc----c-----c-cccccEEH----HHHHHHHHHcCCEEEEEEeCCcceEEeCCCHHH
Confidence 24577767789888877764210 0 0 00111222 3444333 235566664 456777888888
Q ss_pred hhHHhhhh
Q 019770 232 LLLVQSDL 239 (336)
Q Consensus 232 ll~~~sd~ 239 (336)
+..++..+
T Consensus 232 l~~a~~~l 239 (456)
T 2v0h_A 232 LAALERYF 239 (456)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87665543
No 17
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=38.28 E-value=39 Score=26.43 Aligned_cols=62 Identities=18% Similarity=0.240 Sum_probs=42.2
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe---------eCCeEEEEEeecCChhhhhhh
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS---------YEGKVQLLEIAQVPDEHVNEF 150 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~---------~~g~~~~vEysqlp~~~~~~~ 150 (336)
.|.|.|.|++| |+. |..-+++= +. .|++|. .++++++.=|++++++++..+
T Consensus 16 ~E~V~IvNvnN-G~R---------------feTYvI~G---er-SG~I~lNGAAArl~~~GD~vII~aY~~~~~~e~~~~ 75 (97)
T 1uhe_A 16 GMKVEIVDVNN-GER---------------FSTYVILG---KK-RGEICVNGAAARKVAIGDVVIILAYASMNEDEINAH 75 (97)
T ss_dssp TCEEEEEETTT-CCE---------------EEEECEEE---CS-TTCEEEEGGGGGGCCTTCEEEEEEEEEECHHHHHHC
T ss_pred CCEEEEEECCC-Cce---------------EEEEEEee---cc-CCeEEEchHHHccCCCCCEEEEEECccCCHHHHhcC
Confidence 68899999999 333 33334421 23 677874 467899999999999998876
Q ss_pred cccCCcceeeeee
Q 019770 151 KSIEKFKIFNTNN 163 (336)
Q Consensus 151 ~~~~~~~~fntnn 163 (336)
++ +..+.+-+|
T Consensus 76 ~P--~vV~vd~~N 86 (97)
T 1uhe_A 76 KP--SIVLVDEKN 86 (97)
T ss_dssp CC--EEEEECTTS
T ss_pred CC--EEEEECCCC
Confidence 53 444455544
No 18
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=34.35 E-value=52 Score=25.67 Aligned_cols=63 Identities=19% Similarity=0.162 Sum_probs=41.9
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe---------eCCeEEEEEeecCChhhhhhh
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS---------YEGKVQLLEIAQVPDEHVNEF 150 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~---------~~g~~~~vEysqlp~~~~~~~ 150 (336)
.|.+.|.|++| |+. |..-+++= +.-.|++|. .++++++.=|++++++++..+
T Consensus 17 ~E~V~IvNvnN-G~R---------------f~TYvI~G---erGSG~I~lNGAAArl~~~GD~vII~aY~~~~~~e~~~~ 77 (96)
T 1vc3_B 17 FEQVDIYDITN-GAR---------------LTTYALPG---ERGSGVIGINGAAAHLVKPGDLVILVAYGVFDEEEARNL 77 (96)
T ss_dssp TCEEEEEETTT-CCE---------------EEEECEEE---CTTTTCEEEEGGGGGTCCTTCEEEEEEEEEECHHHHTTC
T ss_pred CCEEEEEECCC-Cce---------------EEEEEEEc---cCCCCeEEEchHHHccCCCCCEEEEEECccCCHHHHhcC
Confidence 68899999999 333 33334422 233477774 467899999999999988766
Q ss_pred cccCCcceeeeee
Q 019770 151 KSIEKFKIFNTNN 163 (336)
Q Consensus 151 ~~~~~~~~fntnn 163 (336)
++ +..+.+-+|
T Consensus 78 ~P--~vV~vd~~N 88 (96)
T 1vc3_B 78 KP--TVVLVDERN 88 (96)
T ss_dssp CC--EEEEECTTC
T ss_pred CC--EEEEECCCC
Confidence 53 344455544
No 19
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=29.88 E-value=56 Score=27.24 Aligned_cols=67 Identities=15% Similarity=0.197 Sum_probs=45.5
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe---------eCCeEEEEEeecCChhhhhhh
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS---------YEGKVQLLEIAQVPDEHVNEF 150 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~---------~~g~~~~vEysqlp~~~~~~~ 150 (336)
.|.|.|.|++| |+. |..-+++= +.-.|++|. .++++++.=|++++++++..+
T Consensus 58 ~EkV~IvNvnN-G~R---------------feTYvI~G---erGSG~I~lNGAAArl~~~GD~VII~sYa~~~~~E~~~~ 118 (143)
T 1pqh_A 58 NEAIDIWNVTN-GKR---------------FSTYAIAA---ERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTW 118 (143)
T ss_dssp TCEEEEEETTT-CCE---------------EEEEEEEE---CTTCCCEECCGGGGGTCCTTCEEEEEEEEEEEHHHHTTC
T ss_pred CCEEEEEECCC-Cce---------------EEEEEEEc---cCCCceEEechHHHccCCCCCEEEEEECccCCHHHhccC
Confidence 68999999999 333 33444422 333577774 467899999999999998776
Q ss_pred cccCCcceeeeeeEEEE
Q 019770 151 KSIEKFKIFNTNNLWVN 167 (336)
Q Consensus 151 ~~~~~~~~fntnni~~~ 167 (336)
++ +..+.+-+|-...
T Consensus 119 ~P--~VV~vd~~N~i~~ 133 (143)
T 1pqh_A 119 RP--NVAYFEGDNEMKR 133 (143)
T ss_dssp CC--EEEEEETTTEECC
T ss_pred CC--eEEEECCCCCEEE
Confidence 53 4555666654443
No 20
>2o8m_C Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 2obq_B 3lon_B* 1n1l_C* 1rtl_C* 2a4g_B* 1a1r_C* 2a4q_B* 2f9u_B* 2f9v_B* 2fm2_B* 2gvf_B* 2obo_B* 2a4r_B* 2oc1_B* 2oc7_B* 2oc8_B* 2xcf_C* 2xcn_C* 2xni_C* 3eyd_B* ...
Probab=28.92 E-value=51 Score=19.55 Aligned_cols=22 Identities=23% Similarity=0.533 Sum_probs=13.1
Q ss_pred eEEEEEEEEEcCCCCeEEcCCCCee
Q 019770 301 ITLKGKVTIAAKSGEKLEIPDGAVL 325 (336)
Q Consensus 301 v~l~G~v~i~a~~~~~~~ip~g~~l 325 (336)
|.+-|.+++ .|.++.+||..+|
T Consensus 5 VvIvGri~l---~gkp~v~PdreVl 26 (26)
T 2o8m_C 5 VVIVGRIVL---SGKPAIIPKKXXX 26 (26)
T ss_dssp BEEEEEEEC---SCCCEECCCC---
T ss_pred EEEEEEEEE---CCceEEcCCcCCC
Confidence 455666654 5678889987654
No 21
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=28.13 E-value=37 Score=29.07 Aligned_cols=36 Identities=19% Similarity=0.327 Sum_probs=17.4
Q ss_pred EEecceEEccCeEEEEEEEEEcCCCCeEEcCCCCee
Q 019770 290 KVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVL 325 (336)
Q Consensus 290 ~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l 325 (336)
.+.|++.+|+++.+.-.++|.+..+.++.|-+++.+
T Consensus 53 ~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~I 88 (213)
T 3kwd_A 53 NLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNI 88 (213)
T ss_dssp EEEESEEECTTCEECTTCEEEESSSCCEEECTTCEE
T ss_pred EEeCceEECCCCEEcCCcEEecCCCCceEECCCCEE
Confidence 344555555555554444444444444444444433
No 22
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=24.90 E-value=70 Score=25.17 Aligned_cols=62 Identities=26% Similarity=0.334 Sum_probs=41.9
Q ss_pred ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEe---------eCCeEEEEEeecCChhhhhhh
Q 019770 80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLIS---------YEGKVQLLEIAQVPDEHVNEF 150 (336)
Q Consensus 80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~---------~~g~~~~vEysqlp~~~~~~~ 150 (336)
.|.|.|.|++| |+. |..-+++= + -.|++|. .++++++.=|++++++++..+
T Consensus 17 ~E~V~I~NvnN-G~R---------------f~TYvI~G---e-GSG~I~lNGAAArl~~~GD~vII~aY~~~~~~e~~~~ 76 (102)
T 3plx_B 17 YEKVQVVNVNN-GAR---------------FETYTIAT---Q-EEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEAKTF 76 (102)
T ss_dssp TCEEEEEETTT-CCE---------------EEEECEEE---S-STTCEEEEGGGGGGCCTTCEEEEEEEEEEEHHHHHHC
T ss_pred CCEEEEEECCC-CcE---------------EEEEEEEc---C-CCCEEEeCcHHHhccCCCCEEEEEEcccCCHHHHhcC
Confidence 68899999999 333 33334422 2 4567774 467899999999999988876
Q ss_pred cccCCcceeeeee
Q 019770 151 KSIEKFKIFNTNN 163 (336)
Q Consensus 151 ~~~~~~~~fntnn 163 (336)
++ +..+.+.+|
T Consensus 77 ~P--~vv~vd~~N 87 (102)
T 3plx_B 77 KP--KVVFVDENN 87 (102)
T ss_dssp CC--EEEEECTTS
T ss_pred CC--EEEEECCCC
Confidence 53 444555554
No 23
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=24.51 E-value=47 Score=27.95 Aligned_cols=36 Identities=28% Similarity=0.524 Sum_probs=20.8
Q ss_pred EEEecceEEccCeEEEEEEEEEcCCCCeEEcCCCCee
Q 019770 289 LKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVL 325 (336)
Q Consensus 289 L~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l 325 (336)
-++.|+|..|++..+--.++|.+..+ ++.|-+++.+
T Consensus 25 a~I~g~V~IG~~~~I~~~~~I~~~~g-~i~IG~~~~I 60 (194)
T 3tv0_A 25 SEIRGDVTIGPRTVIHPKARIIAEAG-PIVIGEGNLI 60 (194)
T ss_dssp SEEESSEEECTTCEECTTCEEEESSS-CEEECTTCEE
T ss_pred CEEeCCCEECCCCEECCCCEEccCCC-CeEECCCccc
Confidence 34667777777777765555655432 3445555444
Done!